##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM474478v1 #!genome-build-accession NCBI_Assembly:GCF_004744785.1 #!annotation-date 08/16/2025 10:46:11 #!annotation-source NCBI RefSeq GCF_004744785.1-RS_2025_08_16 ##sequence-region NZ_PYJV01000089.1 1 2712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000089.1 RefSeq region 1 2712 . + . ID=NZ_PYJV01000089.1:1..2712;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000089.1 RefSeq gene 174 1385 . + . ID=gene-C9E93_RS15755;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9E93_RS15755;old_locus_tag=C9E93_16165 NZ_PYJV01000089.1 Protein Homology CDS 174 1385 . + 0 ID=cds-WP_135370572.1;Parent=gene-C9E93_RS15755;Dbxref=GenBank:WP_135370572.1;Name=WP_135370572.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9E93_RS15755;product=porin OmpC;protein_id=WP_135370572.1;transl_table=11 NZ_PYJV01000089.1 RefSeq gene 1645 1833 . - . ID=gene-C9E93_RS15760;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=C9E93_RS15760;old_locus_tag=C9E93_16170 NZ_PYJV01000089.1 Protein Homology CDS 1645 1833 . - 0 ID=cds-WP_024131109.1;Parent=gene-C9E93_RS15760;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=C9E93_RS15760;product=cold shock small protein YmcF;protein_id=WP_024131109.1;transl_table=11 NZ_PYJV01000089.1 RefSeq gene 1844 2056 . - . ID=gene-C9E93_RS15765;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E93_RS15765;old_locus_tag=C9E93_16175 NZ_PYJV01000089.1 Protein Homology CDS 1844 2056 . - 0 ID=cds-WP_000208509.1;Parent=gene-C9E93_RS15765;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9E93_RS15765;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 ##sequence-region NZ_PYJV01000114.1 1 2444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000114.1 RefSeq region 1 2444 . + . ID=NZ_PYJV01000114.1:1..2444;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000114.1 RefSeq pseudogene 1 287 . + . ID=gene-C9E93_RS20815;Name=C9E93_RS20815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS20815;old_locus_tag=C9E93_21360;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000114.1 Protein Homology CDS 1 287 . + 2 ID=cds-C9E93_RS20815;Parent=gene-C9E93_RS20815;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116458.1;locus_tag=C9E93_RS20815;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000114.1 RefSeq gene 1000 1164 . + . ID=gene-C9E93_RS23630;Name=C9E93_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23630 NZ_PYJV01000114.1 GeneMarkS-2+ CDS 1000 1164 . + 0 ID=cds-WP_167851645.1;Parent=gene-C9E93_RS23630;Dbxref=GenBank:WP_167851645.1;Name=WP_167851645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23630;product=hypothetical protein;protein_id=WP_167851645.1;transl_table=11 NZ_PYJV01000114.1 RefSeq gene 1298 1582 . + . ID=gene-C9E93_RS20825;Name=C9E93_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20825;old_locus_tag=C9E93_21370 NZ_PYJV01000114.1 Protein Homology CDS 1298 1582 . + 0 ID=cds-WP_079958642.1;Parent=gene-C9E93_RS20825;Dbxref=GenBank:WP_079958642.1;Name=WP_079958642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026993.6;locus_tag=C9E93_RS20825;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=WP_079958642.1;transl_table=11 NZ_PYJV01000114.1 RefSeq gene 1572 2006 . + . ID=gene-C9E93_RS20830;Name=C9E93_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20830;old_locus_tag=C9E93_21375 NZ_PYJV01000114.1 Protein Homology CDS 1572 2006 . + 0 ID=cds-WP_079958641.1;Parent=gene-C9E93_RS20830;Dbxref=GenBank:WP_079958641.1;Name=WP_079958641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628872.1;locus_tag=C9E93_RS20830;product=hypothetical protein;protein_id=WP_079958641.1;transl_table=11 NZ_PYJV01000114.1 RefSeq pseudogene 2073 2329 . - . ID=gene-C9E93_RS20835;Name=C9E93_RS20835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS20835;old_locus_tag=C9E93_21380;pseudo=true NZ_PYJV01000114.1 Protein Homology CDS 2073 2329 . - 0 ID=cds-C9E93_RS20835;Parent=gene-C9E93_RS20835;Note=frameshifted%3B internal stop;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9E93_RS20835;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000104.1 1 2310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000104.1 RefSeq region 1 2310 . + . ID=NZ_PYJV01000104.1:1..2310;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000104.1 RefSeq gene 1 555 . - . ID=gene-C9E93_RS18465;Name=C9E93_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18465;old_locus_tag=C9E93_18950;partial=true;start_range=.,1 NZ_PYJV01000104.1 Protein Homology CDS 1 555 . - 0 ID=cds-WP_135400632.1;Parent=gene-C9E93_RS18465;Dbxref=GenBank:WP_135400632.1;Name=WP_135400632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676522.1;locus_tag=C9E93_RS18465;partial=true;product=DUF1202 family protein;protein_id=WP_135400632.1;start_range=.,1;transl_table=11 NZ_PYJV01000104.1 RefSeq pseudogene 893 1774 . - . ID=gene-C9E93_RS18475;Name=C9E93_RS18475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS18475;old_locus_tag=C9E93_18960;pseudo=true NZ_PYJV01000104.1 Protein Homology CDS 893 1774 . - 0 ID=cds-C9E93_RS18475;Parent=gene-C9E93_RS18475;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9E93_RS18475;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PYJV01000104.1 RefSeq gene 1891 2112 . + . ID=gene-C9E93_RS18480;Name=C9E93_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18480;old_locus_tag=C9E93_18965 NZ_PYJV01000104.1 Protein Homology CDS 1891 2112 . + 0 ID=cds-WP_031607830.1;Parent=gene-C9E93_RS18480;Dbxref=GenBank:WP_031607830.1;Name=WP_031607830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9E93_RS18480;product=hypothetical protein;protein_id=WP_031607830.1;transl_table=11 ##sequence-region NZ_PYJV01000038.1 1 2269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000038.1 RefSeq region 1 2269 . + . ID=NZ_PYJV01000038.1:1..2269;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000038.1 RefSeq gene 66 142 . - . ID=gene-C9E93_RS06165;Name=C9E93_RS06165;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS06165;old_locus_tag=C9E93_06365 NZ_PYJV01000038.1 tRNAscan-SE tRNA 66 142 . - . ID=rna-C9E93_RS06165;Parent=gene-C9E93_RS06165;anticodon=(pos:complement(106..108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS06165;product=tRNA-Arg NZ_PYJV01000038.1 tRNAscan-SE exon 66 142 . - . ID=exon-C9E93_RS06165-1;Parent=rna-C9E93_RS06165;anticodon=(pos:complement(106..108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS06165;product=tRNA-Arg NZ_PYJV01000038.1 RefSeq gene 397 993 . + . ID=gene-C9E93_RS06175;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9E93_RS06175;old_locus_tag=C9E93_06375 NZ_PYJV01000038.1 Protein Homology CDS 397 993 . + 0 ID=cds-WP_001523348.1;Parent=gene-C9E93_RS06175;Dbxref=GenBank:WP_001523348.1;Name=WP_001523348.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9E93_RS06175;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_001523348.1;transl_table=11 NZ_PYJV01000038.1 RefSeq gene 1155 1466 . + . ID=gene-C9E93_RS06180;Name=C9E93_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06180;old_locus_tag=C9E93_06380 NZ_PYJV01000038.1 Protein Homology CDS 1155 1466 . + 0 ID=cds-WP_023182315.1;Parent=gene-C9E93_RS06180;Dbxref=GenBank:WP_023182315.1;Name=WP_023182315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9E93_RS06180;product=hypothetical protein;protein_id=WP_023182315.1;transl_table=11 NZ_PYJV01000038.1 RefSeq gene 1485 2207 . + . ID=gene-C9E93_RS06185;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9E93_RS06185;old_locus_tag=C9E93_06385 NZ_PYJV01000038.1 Protein Homology CDS 1485 2207 . + 0 ID=cds-WP_135370643.1;Parent=gene-C9E93_RS06185;Dbxref=GenBank:WP_135370643.1;Name=WP_135370643.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9E93_RS06185;product=fimbria biosynthesis regulator FimY;protein_id=WP_135370643.1;transl_table=11 ##sequence-region NZ_PYJV01000040.1 1 2151 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000040.1 RefSeq region 1 2151 . + . ID=NZ_PYJV01000040.1:1..2151;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000040.1 RefSeq gene 1 1661 . + . ID=gene-C9E93_RS06195;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9E93_RS06195;old_locus_tag=C9E93_06395;partial=true;start_range=.,1 NZ_PYJV01000040.1 Protein Homology CDS 1 1661 . + 2 ID=cds-WP_135400599.1;Parent=gene-C9E93_RS06195;Dbxref=GenBank:WP_135400599.1;Name=WP_135400599.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E93_RS06195;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_135400599.1;start_range=.,1;transl_table=11 NZ_PYJV01000040.1 RefSeq gene 1677 2151 . + . ID=gene-C9E93_RS06200;Name=C9E93_RS06200;end_range=2151,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06200;old_locus_tag=C9E93_06400;partial=true NZ_PYJV01000040.1 Protein Homology CDS 1677 2151 . + 0 ID=cds-WP_217810205.1;Parent=gene-C9E93_RS06200;Dbxref=GenBank:WP_217810205.1;Name=WP_217810205.1;Ontology_term=GO:0006814,GO:0016829;end_range=2151,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E93_RS06200;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_217810205.1;transl_table=11 ##sequence-region NZ_PYJV01000075.1 1 1884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000075.1 RefSeq region 1 1884 . + . ID=NZ_PYJV01000075.1:1..1884;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000075.1 RefSeq gene 1 208 . - . ID=gene-C9E93_RS12970;Name=C9E93_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12970;old_locus_tag=C9E93_13295;partial=true;start_range=.,1 NZ_PYJV01000075.1 Protein Homology CDS 1 208 . - 0 ID=cds-WP_217810214.1;Parent=gene-C9E93_RS12970;Dbxref=GenBank:WP_217810214.1;Name=WP_217810214.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E93_RS12970;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_217810214.1;start_range=.,1;transl_table=11 NZ_PYJV01000075.1 RefSeq gene 224 1884 . - . ID=gene-C9E93_RS12975;Name=oadA;end_range=1884,.;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9E93_RS12975;old_locus_tag=C9E93_13300;partial=true NZ_PYJV01000075.1 Protein Homology CDS 224 1884 . - 2 ID=cds-WP_135400618.1;Parent=gene-C9E93_RS12975;Dbxref=GenBank:WP_135400618.1;Name=WP_135400618.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;end_range=1884,.;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E93_RS12975;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_135400618.1;transl_table=11 ##sequence-region NZ_PYJV01000002.1 1 1749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000002.1 RefSeq region 1 1749 . + . ID=NZ_PYJV01000002.1:1..1749;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000002.1 RefSeq gene 1 1725 . + . ID=gene-C9E93_RS00010;Name=C9E93_RS00010;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E93_RS00010;old_locus_tag=C9E93_00010;partial=true;start_range=.,1 NZ_PYJV01000002.1 cmsearch rRNA 1 1725 . + . ID=rna-C9E93_RS00010;Parent=gene-C9E93_RS00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00010;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PYJV01000002.1 cmsearch exon 1 1725 . + . ID=exon-C9E93_RS00010-1;Parent=rna-C9E93_RS00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00010;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PYJV01000035.1 1 1738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000035.1 RefSeq region 1 1738 . + . ID=NZ_PYJV01000035.1:1..1738;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000035.1 RefSeq gene 148 1689 . + . ID=gene-C9E93_RS05470;Name=C9E93_RS05470;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E93_RS05470;old_locus_tag=C9E93_05645 NZ_PYJV01000035.1 cmsearch rRNA 148 1689 . + . ID=rna-C9E93_RS05470;Parent=gene-C9E93_RS05470;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05470;product=16S ribosomal RNA NZ_PYJV01000035.1 cmsearch exon 148 1689 . + . ID=exon-C9E93_RS05470-1;Parent=rna-C9E93_RS05470;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05470;product=16S ribosomal RNA ##sequence-region NZ_PYJV01000064.1 1 1445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000064.1 RefSeq region 1 1445 . + . ID=NZ_PYJV01000064.1:1..1445;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000064.1 RefSeq gene 1 1445 . + . ID=gene-C9E93_RS10620;Name=C9E93_RS10620;end_range=1445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10620;old_locus_tag=C9E93_10885;partial=true;start_range=.,1 NZ_PYJV01000064.1 Protein Homology CDS 1 1445 . + 0 ID=cds-WP_047642006.1;Parent=gene-C9E93_RS10620;Dbxref=GenBank:WP_047642006.1;Name=WP_047642006.1;Ontology_term=GO:0016491,GO:0046872;end_range=1445,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E93_RS10620;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_047642006.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000006.1 1 1293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000006.1 RefSeq region 1 1293 . + . ID=NZ_PYJV01000006.1:1..1293;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000006.1 RefSeq gene 123 1293 . + . ID=gene-C9E93_RS00185;Name=C9E93_RS00185;end_range=1293,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E93_RS00185;old_locus_tag=C9E93_00205;partial=true NZ_PYJV01000006.1 cmsearch rRNA 123 1293 . + . ID=rna-C9E93_RS00185;Parent=gene-C9E93_RS00185;Dbxref=RFAM:RF02541;end_range=1293,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00185;partial=true;product=23S ribosomal RNA NZ_PYJV01000006.1 cmsearch exon 123 1293 . + . ID=exon-C9E93_RS00185-1;Parent=rna-C9E93_RS00185;Dbxref=RFAM:RF02541;end_range=1293,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00185;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PYJV01000073.1 1 98992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000073.1 RefSeq region 1 98992 . + . ID=NZ_PYJV01000073.1:1..98992;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000073.1 RefSeq gene 1 1346 . - . ID=gene-C9E93_RS12165;Name=C9E93_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12165;old_locus_tag=C9E93_12475;partial=true;start_range=.,1 NZ_PYJV01000073.1 Protein Homology CDS 1 1346 . - 0 ID=cds-WP_135400614.1;Parent=gene-C9E93_RS12165;Dbxref=GenBank:WP_135400614.1;Name=WP_135400614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9E93_RS12165;partial=true;product=DUF4765 family protein;protein_id=WP_135400614.1;start_range=.,1;transl_table=11 NZ_PYJV01000073.1 RefSeq pseudogene 1776 1928 . + . ID=gene-C9E93_RS12170;Name=C9E93_RS12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS12170;old_locus_tag=C9E93_12480;partial=true;pseudo=true;start_range=.,1776 NZ_PYJV01000073.1 Protein Homology CDS 1776 1928 . + 0 ID=cds-C9E93_RS12170;Parent=gene-C9E93_RS12170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9E93_RS12170;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1776;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 2034 2969 . + . ID=gene-C9E93_RS12175;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9E93_RS12175;old_locus_tag=C9E93_12485 NZ_PYJV01000073.1 Protein Homology CDS 2034 2969 . + 0 ID=cds-WP_001156208.1;Parent=gene-C9E93_RS12175;Dbxref=GenBank:WP_001156208.1;Name=WP_001156208.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9E93_RS12175;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156208.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 3013 4386 . - . ID=gene-C9E93_RS12180;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9E93_RS12180;old_locus_tag=C9E93_12490 NZ_PYJV01000073.1 Protein Homology CDS 3013 4386 . - 0 ID=cds-WP_131046050.1;Parent=gene-C9E93_RS12180;Dbxref=GenBank:WP_131046050.1;Name=WP_131046050.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9E93_RS12180;product=ATP-dependent RNA helicase DbpA;protein_id=WP_131046050.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 4415 4597 . - . ID=gene-C9E93_RS24200;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=C9E93_RS24200;old_locus_tag=C9E93_12495 NZ_PYJV01000073.1 Protein Homology CDS 4415 4597 . - 0 ID=cds-WP_001670836.1;Parent=gene-C9E93_RS24200;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_271267465.1;locus_tag=C9E93_RS24200;product=proline-rich small protein YnaL;protein_id=WP_001670836.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 4873 5856 . - . ID=gene-C9E93_RS12190;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9E93_RS12190;old_locus_tag=C9E93_12500 NZ_PYJV01000073.1 Protein Homology CDS 4873 5856 . - 0 ID=cds-WP_079946235.1;Parent=gene-C9E93_RS12190;Dbxref=GenBank:WP_079946235.1;Name=WP_079946235.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9E93_RS12190;product=zinc transporter ZntB;protein_id=WP_079946235.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 6002 7156 . - . ID=gene-C9E93_RS12195;Name=C9E93_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12195;old_locus_tag=C9E93_12505 NZ_PYJV01000073.1 Protein Homology CDS 6002 7156 . - 0 ID=cds-WP_000945621.1;Parent=gene-C9E93_RS12195;Dbxref=GenBank:WP_000945621.1;Name=WP_000945621.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=C9E93_RS12195;product=methyl-accepting chemotaxis protein;protein_id=WP_000945621.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 7549 8112 . - . ID=gene-C9E93_RS12200;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9E93_RS12200;old_locus_tag=C9E93_12510 NZ_PYJV01000073.1 Protein Homology CDS 7549 8112 . - 0 ID=cds-WP_001046799.1;Parent=gene-C9E93_RS12200;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9E93_RS12200;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 8370 8885 . + . ID=gene-C9E93_RS12205;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=C9E93_RS12205;old_locus_tag=C9E93_12515 NZ_PYJV01000073.1 Protein Homology CDS 8370 8885 . + 0 ID=cds-WP_000945037.1;Parent=gene-C9E93_RS12205;Dbxref=GenBank:WP_000945037.1;Name=WP_000945037.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9E93_RS12205;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945037.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 9081 9833 . + . ID=gene-C9E93_RS12210;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9E93_RS12210;old_locus_tag=C9E93_12520 NZ_PYJV01000073.1 Protein Homology CDS 9081 9833 . + 0 ID=cds-WP_000611914.1;Parent=gene-C9E93_RS12210;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9E93_RS12210;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 9984 10931 . + . ID=gene-C9E93_RS12215;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9E93_RS12215;old_locus_tag=C9E93_12525 NZ_PYJV01000073.1 Protein Homology CDS 9984 10931 . + 0 ID=cds-WP_001262138.1;Parent=gene-C9E93_RS12215;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9E93_RS12215;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 10986 11240 . - . ID=gene-C9E93_RS12220;Name=C9E93_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12220;old_locus_tag=C9E93_12530 NZ_PYJV01000073.1 Protein Homology CDS 10986 11240 . - 0 ID=cds-WP_000605645.1;Parent=gene-C9E93_RS12220;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9E93_RS12220;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 11479 12510 . + . ID=gene-C9E93_RS12225;Name=C9E93_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12225;old_locus_tag=C9E93_12535 NZ_PYJV01000073.1 Protein Homology CDS 11479 12510 . + 0 ID=cds-WP_000493665.1;Parent=gene-C9E93_RS12225;Dbxref=GenBank:WP_000493665.1;Name=WP_000493665.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9E93_RS12225;product=mechanosensitive ion channel family protein;protein_id=WP_000493665.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 12596 13198 . - . ID=gene-C9E93_RS12230;Name=C9E93_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12230;old_locus_tag=C9E93_12540 NZ_PYJV01000073.1 Protein Homology CDS 12596 13198 . - 0 ID=cds-WP_000163371.1;Parent=gene-C9E93_RS12230;Dbxref=GenBank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9E93_RS12230;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 13242 13928 . + . ID=gene-C9E93_RS12235;Name=C9E93_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12235;old_locus_tag=C9E93_12545 NZ_PYJV01000073.1 Protein Homology CDS 13242 13928 . + 0 ID=cds-WP_023250372.1;Parent=gene-C9E93_RS12235;Dbxref=GenBank:WP_023250372.1;Name=WP_023250372.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9E93_RS12235;product=B3/B4 domain-containing protein;protein_id=WP_023250372.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 13956 14294 . + . ID=gene-C9E93_RS12240;Name=C9E93_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12240;old_locus_tag=C9E93_12550 NZ_PYJV01000073.1 Protein Homology CDS 13956 14294 . + 0 ID=cds-WP_000051816.1;Parent=gene-C9E93_RS12240;Dbxref=GenBank:WP_000051816.1;Name=WP_000051816.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9E93_RS12240;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051816.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 14401 14958 . - . ID=gene-C9E93_RS12245;Name=C9E93_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12245;old_locus_tag=C9E93_12555 NZ_PYJV01000073.1 Protein Homology CDS 14401 14958 . - 0 ID=cds-WP_023251081.1;Parent=gene-C9E93_RS12245;Dbxref=GenBank:WP_023251081.1;Name=WP_023251081.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=C9E93_RS12245;product=redoxin family protein;protein_id=WP_023251081.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 15057 15887 . - . ID=gene-C9E93_RS12250;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=C9E93_RS12250;old_locus_tag=C9E93_12560 NZ_PYJV01000073.1 Protein Homology CDS 15057 15887 . - 0 ID=cds-WP_001242941.1;Parent=gene-C9E93_RS12250;Dbxref=GenBank:WP_001242941.1;Name=WP_001242941.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=C9E93_RS12250;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_001242941.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 15908 17890 . - . ID=gene-C9E93_RS12255;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9E93_RS12255;old_locus_tag=C9E93_12565 NZ_PYJV01000073.1 Protein Homology CDS 15908 17890 . - 0 ID=cds-WP_115284808.1;Parent=gene-C9E93_RS12255;Dbxref=GenBank:WP_115284808.1;Name=WP_115284808.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9E93_RS12255;product=two-partner secretion translocator ZirT;protein_id=WP_115284808.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 17965 18810 . - . ID=gene-C9E93_RS12260;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9E93_RS12260;old_locus_tag=C9E93_12570 NZ_PYJV01000073.1 Protein Homology CDS 17965 18810 . - 0 ID=cds-WP_135370148.1;Parent=gene-C9E93_RS12260;Dbxref=GenBank:WP_135370148.1;Name=WP_135370148.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9E93_RS12260;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_135370148.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 19104 19961 . + . ID=gene-C9E93_RS12270;Name=C9E93_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12270;old_locus_tag=C9E93_12575 NZ_PYJV01000073.1 Protein Homology CDS 19104 19961 . + 0 ID=cds-WP_010989022.1;Parent=gene-C9E93_RS12270;Dbxref=GenBank:WP_010989022.1;Name=WP_010989022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9E93_RS12270;product=GyrI-like domain-containing protein;protein_id=WP_010989022.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 20353 21462 . + . ID=gene-C9E93_RS12275;Name=C9E93_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12275;old_locus_tag=C9E93_12580 NZ_PYJV01000073.1 Protein Homology CDS 20353 21462 . + 0 ID=cds-WP_079927884.1;Parent=gene-C9E93_RS12275;Dbxref=GenBank:WP_079927884.1;Name=WP_079927884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9E93_RS12275;product=hypothetical protein;protein_id=WP_079927884.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 21676 21912 . - . ID=gene-C9E93_RS12280;Name=C9E93_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12280;old_locus_tag=C9E93_12585 NZ_PYJV01000073.1 Protein Homology CDS 21676 21912 . - 0 ID=cds-WP_001168016.1;Parent=gene-C9E93_RS12280;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9E93_RS12280;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 22041 22631 . - . ID=gene-C9E93_RS12285;Name=C9E93_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12285;old_locus_tag=C9E93_12590 NZ_PYJV01000073.1 Protein Homology CDS 22041 22631 . - 0 ID=cds-WP_000208474.1;Parent=gene-C9E93_RS12285;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9E93_RS12285;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 22709 23422 . + . ID=gene-C9E93_RS12290;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9E93_RS12290;old_locus_tag=C9E93_12595 NZ_PYJV01000073.1 Protein Homology CDS 22709 23422 . + 0 ID=cds-WP_135370149.1;Parent=gene-C9E93_RS12290;Dbxref=GenBank:WP_135370149.1;Name=WP_135370149.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9E93_RS12290;product=SDR family oxidoreductase;protein_id=WP_135370149.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 23513 24382 . - . ID=gene-C9E93_RS12295;Name=C9E93_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12295;old_locus_tag=C9E93_12600 NZ_PYJV01000073.1 Protein Homology CDS 23513 24382 . - 0 ID=cds-WP_000456775.1;Parent=gene-C9E93_RS12295;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9E93_RS12295;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 24659 25564 . - . ID=gene-C9E93_RS12300;Name=C9E93_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12300;old_locus_tag=C9E93_12605 NZ_PYJV01000073.1 Protein Homology CDS 24659 25564 . - 0 ID=cds-WP_023201119.1;Parent=gene-C9E93_RS12300;Dbxref=GenBank:WP_023201119.1;Name=WP_023201119.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9E93_RS12300;product=LysR family transcriptional regulator;protein_id=WP_023201119.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 25683 26612 . + . ID=gene-C9E93_RS12305;Name=C9E93_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12305;old_locus_tag=C9E93_12610 NZ_PYJV01000073.1 Protein Homology CDS 25683 26612 . + 0 ID=cds-WP_135370150.1;Parent=gene-C9E93_RS12305;Dbxref=GenBank:WP_135370150.1;Name=WP_135370150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9E93_RS12305;product=aromatic alcohol reductase;protein_id=WP_135370150.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 26708 28321 . - . ID=gene-C9E93_RS12310;Name=C9E93_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12310;old_locus_tag=C9E93_12615 NZ_PYJV01000073.1 Protein Homology CDS 26708 28321 . - 0 ID=cds-WP_001216553.1;Parent=gene-C9E93_RS12310;Dbxref=GenBank:WP_001216553.1;Name=WP_001216553.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9E93_RS12310;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216553.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 28511 29239 . + . ID=gene-C9E93_RS12315;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9E93_RS12315;old_locus_tag=C9E93_12620 NZ_PYJV01000073.1 Protein Homology CDS 28511 29239 . + 0 ID=cds-WP_000219108.1;Parent=gene-C9E93_RS12315;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9E93_RS12315;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 29214 30179 . - . ID=gene-C9E93_RS12320;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9E93_RS12320;old_locus_tag=C9E93_12625 NZ_PYJV01000073.1 Protein Homology CDS 29214 30179 . - 0 ID=cds-WP_080230037.1;Parent=gene-C9E93_RS12320;Dbxref=GenBank:WP_080230037.1;Name=WP_080230037.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9E93_RS12320;product=L-Ala-D/L-Glu epimerase;protein_id=WP_080230037.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 30295 30801 . + . ID=gene-C9E93_RS12325;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9E93_RS12325;old_locus_tag=C9E93_12630 NZ_PYJV01000073.1 Protein Homology CDS 30295 30801 . + 0 ID=cds-WP_000084401.1;Parent=gene-C9E93_RS12325;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9E93_RS12325;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 30891 32432 . - . ID=gene-C9E93_RS12330;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9E93_RS12330;old_locus_tag=C9E93_12635 NZ_PYJV01000073.1 Protein Homology CDS 30891 32432 . - 0 ID=cds-WP_001235493.1;Parent=gene-C9E93_RS12330;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9E93_RS12330;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 32580 33641 . - . ID=gene-C9E93_RS12335;Name=C9E93_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12335;old_locus_tag=C9E93_12640 NZ_PYJV01000073.1 Protein Homology CDS 32580 33641 . - 0 ID=cds-WP_001294472.1;Parent=gene-C9E93_RS12335;Dbxref=GenBank:WP_001294472.1;Name=WP_001294472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9E93_RS12335;product=TIGR01620 family protein;protein_id=WP_001294472.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 33638 35035 . - . ID=gene-C9E93_RS12340;Name=C9E93_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12340;old_locus_tag=C9E93_12645 NZ_PYJV01000073.1 Protein Homology CDS 33638 35035 . - 0 ID=cds-WP_167851657.1;Parent=gene-C9E93_RS12340;Dbxref=GenBank:WP_167851657.1;Name=WP_167851657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9E93_RS12340;product=YcjX family protein;protein_id=WP_167851657.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 35184 35498 . - . ID=gene-C9E93_RS12345;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9E93_RS12345;old_locus_tag=C9E93_12650 NZ_PYJV01000073.1 Protein Homology CDS 35184 35498 . - 0 ID=cds-WP_135370152.1;Parent=gene-C9E93_RS12345;Dbxref=GenBank:WP_135370152.1;Name=WP_135370152.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9E93_RS12345;product=thiosulfate sulfurtransferase PspE;protein_id=WP_135370152.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 35574 35792 . - . ID=gene-C9E93_RS12350;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9E93_RS12350;old_locus_tag=C9E93_12655 NZ_PYJV01000073.1 Protein Homology CDS 35574 35792 . - 0 ID=cds-WP_001097607.1;Parent=gene-C9E93_RS12350;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9E93_RS12350;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 35815 36174 . - . ID=gene-C9E93_RS12355;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9E93_RS12355;old_locus_tag=C9E93_12660 NZ_PYJV01000073.1 Protein Homology CDS 35815 36174 . - 0 ID=cds-WP_000508938.1;Parent=gene-C9E93_RS12355;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9E93_RS12355;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 36174 36398 . - . ID=gene-C9E93_RS12360;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9E93_RS12360;old_locus_tag=C9E93_12665 NZ_PYJV01000073.1 Protein Homology CDS 36174 36398 . - 0 ID=cds-WP_001274953.1;Parent=gene-C9E93_RS12360;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9E93_RS12360;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 36458 37126 . - . ID=gene-C9E93_RS12365;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9E93_RS12365;old_locus_tag=C9E93_12670 NZ_PYJV01000073.1 Protein Homology CDS 36458 37126 . - 0 ID=cds-WP_000511010.1;Parent=gene-C9E93_RS12365;Dbxref=GenBank:WP_000511010.1;Name=WP_000511010.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9E93_RS12365;product=phage shock protein PspA;protein_id=WP_000511010.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 37297 38277 . + . ID=gene-C9E93_RS12370;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9E93_RS12370;old_locus_tag=C9E93_12675 NZ_PYJV01000073.1 Protein Homology CDS 37297 38277 . + 0 ID=cds-WP_001675625.1;Parent=gene-C9E93_RS12370;Dbxref=GenBank:WP_001675625.1;Name=WP_001675625.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9E93_RS12370;product=phage shock protein operon transcriptional activator;protein_id=WP_001675625.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 38389 40038 . + . ID=gene-C9E93_RS12375;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9E93_RS12375;old_locus_tag=C9E93_12680 NZ_PYJV01000073.1 Protein Homology CDS 38389 40038 . + 0 ID=cds-WP_001241628.1;Parent=gene-C9E93_RS12375;Dbxref=GenBank:WP_001241628.1;Name=WP_001241628.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9E93_RS12375;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241628.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 40035 41000 . + . ID=gene-C9E93_RS12380;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9E93_RS12380;old_locus_tag=C9E93_12685 NZ_PYJV01000073.1 Protein Homology CDS 40035 41000 . + 0 ID=cds-WP_000583298.1;Parent=gene-C9E93_RS12380;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9E93_RS12380;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 40987 41877 . + . ID=gene-C9E93_RS12385;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9E93_RS12385;old_locus_tag=C9E93_12690 NZ_PYJV01000073.1 Protein Homology CDS 40987 41877 . + 0 ID=cds-WP_001146150.1;Parent=gene-C9E93_RS12385;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9E93_RS12385;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 41877 42869 . + . ID=gene-C9E93_RS12390;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9E93_RS12390;old_locus_tag=C9E93_12695 NZ_PYJV01000073.1 Protein Homology CDS 41877 42869 . + 0 ID=cds-WP_135370153.1;Parent=gene-C9E93_RS12390;Dbxref=GenBank:WP_135370153.1;Name=WP_135370153.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9E93_RS12390;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_135370153.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 42871 43677 . + . ID=gene-C9E93_RS12395;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9E93_RS12395;old_locus_tag=C9E93_12700 NZ_PYJV01000073.1 Protein Homology CDS 42871 43677 . + 0 ID=cds-WP_000230462.1;Parent=gene-C9E93_RS12395;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9E93_RS12395;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 43693 44400 . - . ID=gene-C9E93_RS12400;Name=C9E93_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12400;old_locus_tag=C9E93_12705 NZ_PYJV01000073.1 Protein Homology CDS 43693 44400 . - 0 ID=cds-WP_031605277.1;Parent=gene-C9E93_RS12400;Dbxref=GenBank:WP_031605277.1;Name=WP_031605277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9E93_RS12400;product=EAL domain-containing protein;protein_id=WP_031605277.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 44867 46240 . - . ID=gene-C9E93_RS12405;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9E93_RS12405;old_locus_tag=C9E93_12710 NZ_PYJV01000073.1 Protein Homology CDS 44867 46240 . - 0 ID=cds-WP_135400615.1;Parent=gene-C9E93_RS12405;Dbxref=GenBank:WP_135400615.1;Name=WP_135400615.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9E93_RS12405;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_135400615.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 46275 46454 . + . ID=gene-C9E93_RS12410;Name=C9E93_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12410;old_locus_tag=C9E93_12715 NZ_PYJV01000073.1 Protein Homology CDS 46275 46454 . + 0 ID=cds-WP_080194042.1;Parent=gene-C9E93_RS12410;Dbxref=GenBank:WP_080194042.1;Name=WP_080194042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9E93_RS12410;product=hypothetical protein;protein_id=WP_080194042.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 46429 46728 . + . ID=gene-C9E93_RS12415;Name=C9E93_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12415;old_locus_tag=C9E93_12720 NZ_PYJV01000073.1 Protein Homology CDS 46429 46728 . + 0 ID=cds-WP_031607852.1;Parent=gene-C9E93_RS12415;Dbxref=GenBank:WP_031607852.1;Name=WP_031607852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9E93_RS12415;product=hypothetical protein;protein_id=WP_031607852.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 46846 47634 . + . ID=gene-C9E93_RS12420;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9E93_RS12420;old_locus_tag=C9E93_12725 NZ_PYJV01000073.1 Protein Homology CDS 46846 47634 . + 0 ID=cds-WP_000506501.1;Parent=gene-C9E93_RS12420;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9E93_RS12420;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_PYJV01000073.1 RefSeq pseudogene 47834 48811 . + . ID=gene-C9E93_RS12425;Name=C9E93_RS12425;end_range=48811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS12425;old_locus_tag=C9E93_12730;partial=true;pseudo=true NZ_PYJV01000073.1 Protein Homology CDS 47834 48811 . + 0 ID=cds-C9E93_RS12425;Parent=gene-C9E93_RS12425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=48811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9E93_RS12425;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 49056 50990 . + . ID=gene-C9E93_RS12430;Name=C9E93_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12430;old_locus_tag=C9E93_12735 NZ_PYJV01000073.1 Protein Homology CDS 49056 50990 . + 0 ID=cds-WP_000485040.1;Parent=gene-C9E93_RS12430;Dbxref=GenBank:WP_000485040.1;Name=WP_000485040.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9E93_RS12430;product=exoribonuclease II;protein_id=WP_000485040.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 51252 53234 . + . ID=gene-C9E93_RS12435;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=C9E93_RS12435;old_locus_tag=C9E93_12745 NZ_PYJV01000073.1 Protein Homology CDS 51252 53234 . + 0 ID=cds-WP_024146146.1;Parent=gene-C9E93_RS12435;Dbxref=GenBank:WP_024146146.1;Name=WP_024146146.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9E93_RS12435;product=cyclic di-GMP phosphodiesterase;protein_id=WP_024146146.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 53356 53535 . + . ID=gene-C9E93_RS12440;Name=C9E93_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12440;old_locus_tag=C9E93_12750 NZ_PYJV01000073.1 Protein Homology CDS 53356 53535 . + 0 ID=cds-WP_001279854.1;Parent=gene-C9E93_RS12440;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9E93_RS12440;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 53622 54374 . + . ID=gene-C9E93_RS12445;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=C9E93_RS12445;old_locus_tag=C9E93_12755 NZ_PYJV01000073.1 Protein Homology CDS 53622 54374 . + 0 ID=cds-WP_001088593.1;Parent=gene-C9E93_RS12445;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9E93_RS12445;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 54633 54851 . + . ID=gene-C9E93_RS12450;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9E93_RS12450;old_locus_tag=C9E93_12760 NZ_PYJV01000073.1 Protein Homology CDS 54633 54851 . + 0 ID=cds-WP_000481166.1;Parent=gene-C9E93_RS12450;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9E93_RS12450;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 54971 55297 . - . ID=gene-C9E93_RS12455;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9E93_RS12455;old_locus_tag=C9E93_12765 NZ_PYJV01000073.1 Protein Homology CDS 54971 55297 . - 0 ID=cds-WP_001285199.1;Parent=gene-C9E93_RS12455;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9E93_RS12455;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 55297 56034 . - . ID=gene-C9E93_RS12460;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9E93_RS12460;old_locus_tag=C9E93_12770 NZ_PYJV01000073.1 Protein Homology CDS 55297 56034 . - 0 ID=cds-WP_079788611.1;Parent=gene-C9E93_RS12460;Dbxref=GenBank:WP_079788611.1;Name=WP_079788611.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9E93_RS12460;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_079788611.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 56225 57394 . - . ID=gene-C9E93_RS12465;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9E93_RS12465;old_locus_tag=C9E93_12775 NZ_PYJV01000073.1 Protein Homology CDS 56225 57394 . - 0 ID=cds-WP_000891378.1;Parent=gene-C9E93_RS12465;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9E93_RS12465;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 57401 57709 . - . ID=gene-C9E93_RS12470;Name=C9E93_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12470;old_locus_tag=C9E93_12780 NZ_PYJV01000073.1 Protein Homology CDS 57401 57709 . - 0 ID=cds-WP_000876301.1;Parent=gene-C9E93_RS12470;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9E93_RS12470;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 57859 58623 . - . ID=gene-C9E93_RS12475;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9E93_RS12475;old_locus_tag=C9E93_12790 NZ_PYJV01000073.1 Protein Homology CDS 57859 58623 . - 0 ID=cds-WP_000948651.1;Parent=gene-C9E93_RS12475;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9E93_RS12475;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 58819 59409 . + . ID=gene-C9E93_RS12480;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9E93_RS12480;old_locus_tag=C9E93_12795 NZ_PYJV01000073.1 Protein Homology CDS 58819 59409 . + 0 ID=cds-WP_001176284.1;Parent=gene-C9E93_RS12480;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9E93_RS12480;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 59465 62140 . - . ID=gene-C9E93_RS12485;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9E93_RS12485;old_locus_tag=C9E93_12800 NZ_PYJV01000073.1 Protein Homology CDS 59465 62140 . - 0 ID=cds-WP_135370616.1;Parent=gene-C9E93_RS12485;Dbxref=GenBank:WP_135370616.1;Name=WP_135370616.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9E93_RS12485;product=aconitate hydratase AcnA;protein_id=WP_135370616.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 62323 62415 . - . ID=gene-C9E93_RS23945;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=C9E93_RS23945 NZ_PYJV01000073.1 Protein Homology CDS 62323 62415 . - 0 ID=cds-WP_223156441.1;Parent=gene-C9E93_RS23945;Dbxref=GenBank:WP_223156441.1;Name=WP_223156441.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=C9E93_RS23945;product=small membrane protein YmiC;protein_id=WP_223156441.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 62696 62836 . - . ID=gene-C9E93_RS12495;Name=C9E93_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12495;old_locus_tag=C9E93_12810 NZ_PYJV01000073.1 Protein Homology CDS 62696 62836 . - 0 ID=cds-WP_213083417.1;Parent=gene-C9E93_RS12495;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9E93_RS12495;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 63117 64091 . - . ID=gene-C9E93_RS12500;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9E93_RS12500;old_locus_tag=C9E93_12815 NZ_PYJV01000073.1 Protein Homology CDS 63117 64091 . - 0 ID=cds-WP_023232099.1;Parent=gene-C9E93_RS12500;Dbxref=GenBank:WP_023232099.1;Name=WP_023232099.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9E93_RS12500;product=HTH-type transcriptional regulator CysB;protein_id=WP_023232099.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 64502 67099 . - . ID=gene-C9E93_RS12505;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9E93_RS12505;old_locus_tag=C9E93_12820 NZ_PYJV01000073.1 Protein Homology CDS 64502 67099 . - 0 ID=cds-WP_000513593.1;Parent=gene-C9E93_RS12505;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9E93_RS12505;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 67502 67753 . + . ID=gene-C9E93_RS12510;Name=C9E93_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12510;old_locus_tag=C9E93_12830 NZ_PYJV01000073.1 Protein Homology CDS 67502 67753 . + 0 ID=cds-WP_000548616.1;Parent=gene-C9E93_RS12510;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9E93_RS12510;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 67795 68841 . - . ID=gene-C9E93_RS12515;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9E93_RS12515;old_locus_tag=C9E93_12835 NZ_PYJV01000073.1 Protein Homology CDS 67795 68841 . - 0 ID=cds-WP_000422082.1;Parent=gene-C9E93_RS12515;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9E93_RS12515;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 69079 69840 . + . ID=gene-C9E93_RS12520;Name=C9E93_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12520;old_locus_tag=C9E93_12840 NZ_PYJV01000073.1 Protein Homology CDS 69079 69840 . + 0 ID=cds-WP_000559310.1;Parent=gene-C9E93_RS12520;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9E93_RS12520;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 69837 70427 . + . ID=gene-C9E93_RS12525;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9E93_RS12525;old_locus_tag=C9E93_12845 NZ_PYJV01000073.1 Protein Homology CDS 69837 70427 . + 0 ID=cds-WP_001278856.1;Parent=gene-C9E93_RS12525;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9E93_RS12525;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 70514 71389 . - . ID=gene-C9E93_RS12530;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9E93_RS12530;old_locus_tag=C9E93_12850 NZ_PYJV01000073.1 Protein Homology CDS 70514 71389 . - 0 ID=cds-WP_001291233.1;Parent=gene-C9E93_RS12530;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9E93_RS12530;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 71490 72110 . - . ID=gene-C9E93_RS12535;Name=C9E93_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12535;old_locus_tag=C9E93_12855 NZ_PYJV01000073.1 Protein Homology CDS 71490 72110 . - 0 ID=cds-WP_135400616.1;Parent=gene-C9E93_RS12535;Dbxref=GenBank:WP_135400616.1;Name=WP_135400616.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9E93_RS12535;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_135400616.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 72118 72999 . - . ID=gene-C9E93_RS12540;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9E93_RS12540;old_locus_tag=C9E93_12860 NZ_PYJV01000073.1 Protein Homology CDS 72118 72999 . - 0 ID=cds-WP_080170023.1;Parent=gene-C9E93_RS12540;Dbxref=GenBank:WP_080170023.1;Name=WP_080170023.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9E93_RS12540;product=RNase RNM;protein_id=WP_080170023.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 73121 73165 . + . ID=gene-C9E93_RS12545;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9E93_RS12545 NZ_PYJV01000073.1 Protein Homology CDS 73121 73165 . + 0 ID=cds-WP_217810213.1;Parent=gene-C9E93_RS12545;Dbxref=GenBank:WP_217810213.1;Name=WP_217810213.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9E93_RS12545;product=trp operon leader peptide;protein_id=WP_217810213.1;transl_table=11 NZ_PYJV01000073.1 cmsearch sequence_feature 73142 73237 . + . ID=id-NZ_PYJV01000073.1:73142..73237;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000073.1 RefSeq gene 73260 74822 . + . ID=gene-C9E93_RS12550;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=C9E93_RS12550;old_locus_tag=C9E93_12865 NZ_PYJV01000073.1 Protein Homology CDS 73260 74822 . + 0 ID=cds-WP_001194376.1;Parent=gene-C9E93_RS12550;Dbxref=GenBank:WP_001194376.1;Name=WP_001194376.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9E93_RS12550;product=anthranilate synthase component I;protein_id=WP_001194376.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 74822 76417 . + . ID=gene-C9E93_RS12555;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9E93_RS12555;old_locus_tag=C9E93_12870 NZ_PYJV01000073.1 Protein Homology CDS 74822 76417 . + 0 ID=cds-WP_000763489.1;Parent=gene-C9E93_RS12555;Dbxref=GenBank:WP_000763489.1;Name=WP_000763489.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9E93_RS12555;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763489.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 76421 77779 . + . ID=gene-C9E93_RS12560;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9E93_RS12560;old_locus_tag=C9E93_12875 NZ_PYJV01000073.1 Protein Homology CDS 76421 77779 . + 0 ID=cds-WP_135400617.1;Parent=gene-C9E93_RS12560;Dbxref=GenBank:WP_135400617.1;Name=WP_135400617.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9E93_RS12560;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_135400617.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 77789 78982 . + . ID=gene-C9E93_RS12565;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9E93_RS12565;old_locus_tag=C9E93_12880 NZ_PYJV01000073.1 Protein Homology CDS 77789 78982 . + 0 ID=cds-WP_001728861.1;Parent=gene-C9E93_RS12565;Dbxref=GenBank:WP_001728861.1;Name=WP_001728861.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9E93_RS12565;product=tryptophan synthase subunit beta;protein_id=WP_001728861.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 78982 79788 . + . ID=gene-C9E93_RS12570;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9E93_RS12570;old_locus_tag=C9E93_12885 NZ_PYJV01000073.1 Protein Homology CDS 78982 79788 . + 0 ID=cds-WP_000443029.1;Parent=gene-C9E93_RS12570;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9E93_RS12570;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 80268 80450 . + . ID=gene-C9E93_RS12575;Name=C9E93_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12575;old_locus_tag=C9E93_12890 NZ_PYJV01000073.1 Protein Homology CDS 80268 80450 . + 0 ID=cds-WP_000807657.1;Parent=gene-C9E93_RS12575;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9E93_RS12575;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 80540 81043 . + . ID=gene-C9E93_RS12580;Name=C9E93_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12580;old_locus_tag=C9E93_12895 NZ_PYJV01000073.1 Protein Homology CDS 80540 81043 . + 0 ID=cds-WP_001022822.1;Parent=gene-C9E93_RS12580;Dbxref=GenBank:WP_001022822.1;Name=WP_001022822.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9E93_RS12580;product=YciE/YciF ferroxidase family protein;protein_id=WP_001022822.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 81117 81623 . + . ID=gene-C9E93_RS12585;Name=C9E93_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12585;old_locus_tag=C9E93_12900 NZ_PYJV01000073.1 Protein Homology CDS 81117 81623 . + 0 ID=cds-WP_001109977.1;Parent=gene-C9E93_RS12585;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9E93_RS12585;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 81643 82521 . + . ID=gene-C9E93_RS12590;Name=C9E93_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12590;old_locus_tag=C9E93_12905 NZ_PYJV01000073.1 Protein Homology CDS 81643 82521 . + 0 ID=cds-WP_000488348.1;Parent=gene-C9E93_RS12590;Dbxref=GenBank:WP_000488348.1;Name=WP_000488348.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9E93_RS12590;product=manganese catalase family protein;protein_id=WP_000488348.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 82603 83241 . - . ID=gene-C9E93_RS12595;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9E93_RS12595;old_locus_tag=C9E93_12910 NZ_PYJV01000073.1 Protein Homology CDS 82603 83241 . - 0 ID=cds-WP_000714798.1;Parent=gene-C9E93_RS12595;Dbxref=GenBank:WP_000714798.1;Name=WP_000714798.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9E93_RS12595;product=outer membrane protein OmpW;protein_id=WP_000714798.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 83578 83982 . + . ID=gene-C9E93_RS12600;Name=C9E93_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12600;old_locus_tag=C9E93_12915 NZ_PYJV01000073.1 Protein Homology CDS 83578 83982 . + 0 ID=cds-WP_000114955.1;Parent=gene-C9E93_RS12600;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9E93_RS12600;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 84008 84751 . + . ID=gene-C9E93_RS12605;Name=C9E93_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12605;old_locus_tag=C9E93_12920 NZ_PYJV01000073.1 Protein Homology CDS 84008 84751 . + 0 ID=cds-WP_000028507.1;Parent=gene-C9E93_RS12605;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9E93_RS12605;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 84808 85347 . + . ID=gene-C9E93_RS12610;Name=C9E93_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12610;old_locus_tag=C9E93_12925 NZ_PYJV01000073.1 Protein Homology CDS 84808 85347 . + 0 ID=cds-WP_000808682.1;Parent=gene-C9E93_RS12610;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9E93_RS12610;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 85508 85909 . + . ID=gene-C9E93_RS12615;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9E93_RS12615;old_locus_tag=C9E93_12930 NZ_PYJV01000073.1 Protein Homology CDS 85508 85909 . + 0 ID=cds-WP_000210317.1;Parent=gene-C9E93_RS12615;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9E93_RS12615;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 85969 86697 . - . ID=gene-C9E93_RS12620;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9E93_RS12620;old_locus_tag=C9E93_12935 NZ_PYJV01000073.1 Protein Homology CDS 85969 86697 . - 0 ID=cds-WP_001525247.1;Parent=gene-C9E93_RS12620;Dbxref=GenBank:WP_001525247.1;Name=WP_001525247.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9E93_RS12620;product=TonB system transport protein TonB;protein_id=WP_001525247.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 86921 87217 . + . ID=gene-C9E93_RS12625;Name=C9E93_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12625;old_locus_tag=C9E93_12940 NZ_PYJV01000073.1 Protein Homology CDS 86921 87217 . + 0 ID=cds-WP_000967605.1;Parent=gene-C9E93_RS12625;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9E93_RS12625;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 87261 87434 . - . ID=gene-C9E93_RS12630;Name=C9E93_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12630 NZ_PYJV01000073.1 Protein Homology CDS 87261 87434 . - 0 ID=cds-WP_001531561.1;Parent=gene-C9E93_RS12630;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9E93_RS12630;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 87577 89037 . + . ID=gene-C9E93_RS12635;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9E93_RS12635;old_locus_tag=C9E93_12945 NZ_PYJV01000073.1 Protein Homology CDS 87577 89037 . + 0 ID=cds-WP_000206886.1;Parent=gene-C9E93_RS12635;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9E93_RS12635;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 89071 89400 . + . ID=gene-C9E93_RS12640;Name=C9E93_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12640;old_locus_tag=C9E93_12950 NZ_PYJV01000073.1 Protein Homology CDS 89071 89400 . + 0 ID=cds-WP_000425070.1;Parent=gene-C9E93_RS12640;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9E93_RS12640;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 89448 90284 . - . ID=gene-C9E93_RS12645;Name=C9E93_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12645;old_locus_tag=C9E93_12955 NZ_PYJV01000073.1 Protein Homology CDS 89448 90284 . - 0 ID=cds-WP_135370544.1;Parent=gene-C9E93_RS12645;Dbxref=GenBank:WP_135370544.1;Name=WP_135370544.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9E93_RS12645;product=ion transporter;protein_id=WP_135370544.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 90332 91336 . - . ID=gene-C9E93_RS12650;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9E93_RS12650;old_locus_tag=C9E93_12960 NZ_PYJV01000073.1 Protein Homology CDS 90332 91336 . - 0 ID=cds-WP_000994696.1;Parent=gene-C9E93_RS12650;Dbxref=GenBank:WP_000994696.1;Name=WP_000994696.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9E93_RS12650;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994696.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 91333 92340 . - . ID=gene-C9E93_RS12655;Name=C9E93_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12655;old_locus_tag=C9E93_12965 NZ_PYJV01000073.1 Protein Homology CDS 91333 92340 . - 0 ID=cds-WP_000058857.1;Parent=gene-C9E93_RS12655;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9E93_RS12655;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 92352 93260 . - . ID=gene-C9E93_RS12660;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9E93_RS12660;old_locus_tag=C9E93_12970 NZ_PYJV01000073.1 Protein Homology CDS 92352 93260 . - 0 ID=cds-WP_000979653.1;Parent=gene-C9E93_RS12660;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9E93_RS12660;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 93275 94195 . - . ID=gene-C9E93_RS12665;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9E93_RS12665;old_locus_tag=C9E93_12975 NZ_PYJV01000073.1 Protein Homology CDS 93275 94195 . - 0 ID=cds-WP_000911097.1;Parent=gene-C9E93_RS12665;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9E93_RS12665;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 94318 95949 . - . ID=gene-C9E93_RS12670;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9E93_RS12670;old_locus_tag=C9E93_12980 NZ_PYJV01000073.1 Protein Homology CDS 94318 95949 . - 0 ID=cds-WP_001527794.1;Parent=gene-C9E93_RS12670;Dbxref=GenBank:WP_001527794.1;Name=WP_001527794.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=C9E93_RS12670;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001527794.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 96713 97360 . - . ID=gene-C9E93_RS12680;Name=C9E93_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12680;old_locus_tag=C9E93_12990 NZ_PYJV01000073.1 Protein Homology CDS 96713 97360 . - 0 ID=cds-WP_000615840.1;Parent=gene-C9E93_RS12680;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9E93_RS12680;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_PYJV01000073.1 RefSeq gene 97837 98992 . + . ID=gene-C9E93_RS12685;Name=C9E93_RS12685;end_range=98992,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12685;old_locus_tag=C9E93_12995;partial=true NZ_PYJV01000073.1 Protein Homology CDS 97837 98992 . + 0 ID=cds-WP_133308241.1;Parent=gene-C9E93_RS12685;Dbxref=GenBank:WP_133308241.1;Name=WP_133308241.1;Ontology_term=GO:0016491;end_range=98992,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E93_RS12685;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_133308241.1;transl_table=11 ##sequence-region NZ_PYJV01000048.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000048.1 RefSeq region 1 1278 . + . ID=NZ_PYJV01000048.1:1..1278;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000048.1 RefSeq gene 56 1278 . + . ID=gene-C9E93_RS07395;Name=C9E93_RS07395;end_range=1278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07395;old_locus_tag=C9E93_07630;partial=true NZ_PYJV01000048.1 Protein Homology CDS 56 407 . + 0 ID=cds-WP_135400602.1;Parent=gene-C9E93_RS07395;Dbxref=GenBank:WP_135400602.1;Name=WP_135400602.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E93_RS07395;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=WP_135400602.1;transl_table=11 NZ_PYJV01000048.1 Protein Homology CDS 407 1278 . + 2 ID=cds-WP_135400602.1;Parent=gene-C9E93_RS07395;Dbxref=GenBank:WP_135400602.1;Name=WP_135400602.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=1278,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E93_RS07395;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=WP_135400602.1;transl_table=11 ##sequence-region NZ_PYJV01000052.1 1 1174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000052.1 RefSeq region 1 1174 . + . ID=NZ_PYJV01000052.1:1..1174;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000052.1 RefSeq gene 119 574 . - . ID=gene-C9E93_RS08165;Name=C9E93_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08165;old_locus_tag=C9E93_08395 NZ_PYJV01000052.1 Protein Homology CDS 119 574 . - 0 ID=cds-WP_000487337.1;Parent=gene-C9E93_RS08165;Dbxref=GenBank:WP_000487337.1;Name=WP_000487337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=C9E93_RS08165;product=hypothetical protein;protein_id=WP_000487337.1;transl_table=11 NZ_PYJV01000052.1 RefSeq gene 613 1174 . - . ID=gene-C9E93_RS23870;Name=C9E93_RS23870;end_range=1174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23870;partial=true NZ_PYJV01000052.1 Protein Homology CDS 613 1174 . - 1 ID=cds-WP_255121242.1;Parent=gene-C9E93_RS23870;Dbxref=GenBank:WP_255121242.1;Name=WP_255121242.1;end_range=1174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=C9E93_RS23870;partial=true;product=hypothetical protein;protein_id=WP_255121242.1;transl_table=11 ##sequence-region NZ_PYJV01000020.1 1 1141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000020.1 RefSeq region 1 1141 . + . ID=NZ_PYJV01000020.1:1..1141;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000020.1 RefSeq gene 1 405 . + . ID=gene-C9E93_RS02150;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9E93_RS02150;old_locus_tag=C9E93_02235;partial=true;start_range=.,1 NZ_PYJV01000020.1 Protein Homology CDS 1 405 . + 0 ID=cds-WP_135369947.1;Parent=gene-C9E93_RS02150;Dbxref=GenBank:WP_135369947.1;Name=WP_135369947.1;Ontology_term=GO:0015886,GO:0017004,GO:0015439,GO:0022857,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA,transmembrane transporter activity|0022857||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=C9E93_RS02150;partial=true;product=heme ABC exporter ATP-binding protein CcmA;protein_id=WP_135369947.1;start_range=.,1;transl_table=11 NZ_PYJV01000020.1 RefSeq gene 402 1061 . + . ID=gene-C9E93_RS02155;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9E93_RS02155;old_locus_tag=C9E93_02240 NZ_PYJV01000020.1 Protein Homology CDS 402 1061 . + 0 ID=cds-WP_000990033.1;Parent=gene-C9E93_RS02155;Dbxref=GenBank:WP_000990033.1;Name=WP_000990033.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9E93_RS02155;product=heme exporter protein CcmB;protein_id=WP_000990033.1;transl_table=11 ##sequence-region NZ_PYJV01000091.1 1 1019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000091.1 RefSeq region 1 1019 . + . ID=NZ_PYJV01000091.1:1..1019;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000091.1 RefSeq gene 1 1019 . + . ID=gene-C9E93_RS16255;Name=tuf;end_range=1019,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9E93_RS16255;old_locus_tag=C9E93_16670;partial=true;start_range=.,1 NZ_PYJV01000091.1 Protein Homology CDS 1 1019 . + 0 ID=cds-WP_001543627.1;Parent=gene-C9E93_RS16255;Dbxref=GenBank:WP_001543627.1;Name=WP_001543627.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1019,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9E93_RS16255;partial=true;product=elongation factor Tu;protein_id=WP_001543627.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000108.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000108.1 RefSeq region 1 967 . + . ID=NZ_PYJV01000108.1:1..967;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000108.1 RefSeq gene 124 783 . - . ID=gene-C9E93_RS18640;Name=C9E93_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18640;old_locus_tag=C9E93_19135 NZ_PYJV01000108.1 Protein Homology CDS 124 783 . - 0 ID=cds-WP_000009241.1;Parent=gene-C9E93_RS18640;Dbxref=GenBank:WP_000009241.1;Name=WP_000009241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009241.1;locus_tag=C9E93_RS18640;product=DUF2726 domain-containing protein;protein_id=WP_000009241.1;transl_table=11 ##sequence-region NZ_PYJV01000014.1 1 945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000014.1 RefSeq region 1 945 . + . ID=NZ_PYJV01000014.1:1..945;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000014.1 RefSeq gene 1 945 . + . ID=gene-C9E93_RS00830;Name=C9E93_RS00830;end_range=945,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00830;old_locus_tag=C9E93_00890;partial=true;start_range=.,1 NZ_PYJV01000014.1 Protein Homology CDS 1 945 . + 1 ID=cds-WP_135369949.1;Parent=gene-C9E93_RS00830;Dbxref=GenBank:WP_135369949.1;Name=WP_135369949.1;end_range=945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9E93_RS00830;partial=true;product=RHS domain-containing protein;protein_id=WP_135369949.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000127.1 1 875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000127.1 RefSeq region 1 875 . + . ID=NZ_PYJV01000127.1:1..875;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000127.1 RefSeq gene 1 250 . - . ID=gene-C9E93_RS23035;Name=C9E93_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23035;old_locus_tag=C9E93_23670;partial=true;start_range=.,1 NZ_PYJV01000127.1 Protein Homology CDS 1 250 . - 0 ID=cds-WP_135370058.1;Parent=gene-C9E93_RS23035;Dbxref=GenBank:WP_135370058.1;Name=WP_135370058.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9E93_RS23035;partial=true;product=transposase;protein_id=WP_135370058.1;start_range=.,1;transl_table=11 NZ_PYJV01000127.1 RefSeq pseudogene 458 758 . + . ID=gene-C9E93_RS23040;Name=C9E93_RS23040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23040;old_locus_tag=C9E93_23675;pseudo=true NZ_PYJV01000127.1 Protein Homology CDS 458 758 . + 0 ID=cds-C9E93_RS23040;Parent=gene-C9E93_RS23040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=C9E93_RS23040;product=YciI family protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000023.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000023.1 RefSeq region 1 801 . + . ID=NZ_PYJV01000023.1:1..801;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000023.1 RefSeq pseudogene 1 801 . - . ID=gene-C9E93_RS02830;Name=C9E93_RS02830;end_range=801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS02830;old_locus_tag=C9E93_02940;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000023.1 Protein Homology CDS 1 801 . - 0 ID=cds-C9E93_RS02830;Parent=gene-C9E93_RS02830;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313;end_range=801,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9E93_RS02830;partial=true;product=IS3-like element ISEcl10 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000095.1 1 97703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000095.1 RefSeq region 1 97703 . + . ID=NZ_PYJV01000095.1:1..97703;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000095.1 RefSeq gene 754 933 . + . ID=gene-C9E93_RS16930;Name=C9E93_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16930;old_locus_tag=C9E93_17370 NZ_PYJV01000095.1 Protein Homology CDS 754 933 . + 0 ID=cds-WP_375141975.1;Parent=gene-C9E93_RS16930;Dbxref=GenBank:WP_375141975.1;Name=WP_375141975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006855804.1;locus_tag=C9E93_RS16930;product=hypothetical protein;protein_id=WP_375141975.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 1174 2298 . - . ID=gene-C9E93_RS16935;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9E93_RS16935;old_locus_tag=C9E93_17380 NZ_PYJV01000095.1 Protein Homology CDS 1174 2298 . - 0 ID=cds-WP_135370509.1;Parent=gene-C9E93_RS16935;Dbxref=GenBank:WP_135370509.1;Name=WP_135370509.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9E93_RS16935;product=type III secretion system effector SopF;protein_id=WP_135370509.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 2743 3993 . - . ID=gene-C9E93_RS16940;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9E93_RS16940;old_locus_tag=C9E93_17385 NZ_PYJV01000095.1 Protein Homology CDS 2743 3993 . - 0 ID=cds-WP_000444508.1;Parent=gene-C9E93_RS16940;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9E93_RS16940;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 4165 4830 . + . ID=gene-C9E93_RS16945;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9E93_RS16945;old_locus_tag=C9E93_17390 NZ_PYJV01000095.1 Protein Homology CDS 4165 4830 . + 0 ID=cds-WP_001249412.1;Parent=gene-C9E93_RS16945;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9E93_RS16945;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 4827 5156 . + . ID=gene-C9E93_RS16950;Name=C9E93_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16950;old_locus_tag=C9E93_17395 NZ_PYJV01000095.1 Protein Homology CDS 4827 5156 . + 0 ID=cds-WP_000825956.1;Parent=gene-C9E93_RS16950;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9E93_RS16950;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 5168 5629 . + . ID=gene-C9E93_RS16955;Name=C9E93_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16955;old_locus_tag=C9E93_17400 NZ_PYJV01000095.1 Protein Homology CDS 5168 5629 . + 0 ID=cds-WP_000476069.1;Parent=gene-C9E93_RS16955;Dbxref=GenBank:WP_000476069.1;Name=WP_000476069.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9E93_RS16955;product=NUDIX hydrolase;protein_id=WP_000476069.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 5683 6789 . + . ID=gene-C9E93_RS16960;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=C9E93_RS16960;old_locus_tag=C9E93_17405 NZ_PYJV01000095.1 Protein Homology CDS 5683 6789 . + 0 ID=cds-WP_135370510.1;Parent=gene-C9E93_RS16960;Dbxref=GenBank:WP_135370510.1;Name=WP_135370510.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9E93_RS16960;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_135370510.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 6876 7517 . + . ID=gene-C9E93_RS16965;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9E93_RS16965;old_locus_tag=C9E93_17410 NZ_PYJV01000095.1 Protein Homology CDS 6876 7517 . + 0 ID=cds-WP_001519653.1;Parent=gene-C9E93_RS16965;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9E93_RS16965;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 7521 8891 . + . ID=gene-C9E93_RS16970;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9E93_RS16970;old_locus_tag=C9E93_17415 NZ_PYJV01000095.1 Protein Homology CDS 7521 8891 . + 0 ID=cds-WP_000423763.1;Parent=gene-C9E93_RS16970;Dbxref=GenBank:WP_000423763.1;Name=WP_000423763.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9E93_RS16970;product=adenylosuccinate lyase;protein_id=WP_000423763.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 9018 9689 . + . ID=gene-C9E93_RS16975;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9E93_RS16975;old_locus_tag=C9E93_17420 NZ_PYJV01000095.1 Protein Homology CDS 9018 9689 . + 0 ID=cds-WP_001537766.1;Parent=gene-C9E93_RS16975;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=C9E93_RS16975;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 9689 11152 . + . ID=gene-C9E93_RS16980;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9E93_RS16980;old_locus_tag=C9E93_17425 NZ_PYJV01000095.1 Protein Homology CDS 9689 11152 . + 0 ID=cds-WP_001031687.1;Parent=gene-C9E93_RS16980;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9E93_RS16980;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 11233 12354 . + . ID=gene-C9E93_RS16985;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9E93_RS16985;old_locus_tag=C9E93_17430 NZ_PYJV01000095.1 Protein Homology CDS 11233 12354 . + 0 ID=cds-WP_079928059.1;Parent=gene-C9E93_RS16985;Dbxref=GenBank:WP_079928059.1;Name=WP_079928059.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9E93_RS16985;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_079928059.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 12394 13728 . - . ID=gene-C9E93_RS16990;Name=C9E93_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16990;old_locus_tag=C9E93_17435 NZ_PYJV01000095.1 Protein Homology CDS 12394 13728 . - 0 ID=cds-WP_135370511.1;Parent=gene-C9E93_RS16990;Dbxref=GenBank:WP_135370511.1;Name=WP_135370511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9E93_RS16990;product=hypothetical protein;protein_id=WP_135370511.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 13732 14961 . - . ID=gene-C9E93_RS16995;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9E93_RS16995;old_locus_tag=C9E93_17440 NZ_PYJV01000095.1 Protein Homology CDS 13732 14961 . - 0 ID=cds-WP_000359410.1;Parent=gene-C9E93_RS16995;Dbxref=GenBank:WP_000359410.1;Name=WP_000359410.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9E93_RS16995;product=peptidase T;protein_id=WP_000359410.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 15212 16348 . + . ID=gene-C9E93_RS17000;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9E93_RS17000;old_locus_tag=C9E93_17445 NZ_PYJV01000095.1 Protein Homology CDS 15212 16348 . + 0 ID=cds-WP_000531607.1;Parent=gene-C9E93_RS17000;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9E93_RS17000;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 16332 17195 . + . ID=gene-C9E93_RS17005;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9E93_RS17005;old_locus_tag=C9E93_17450 NZ_PYJV01000095.1 Protein Homology CDS 16332 17195 . + 0 ID=cds-WP_000799391.1;Parent=gene-C9E93_RS17005;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9E93_RS17005;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 17524 18534 . + . ID=gene-C9E93_RS17010;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9E93_RS17010;old_locus_tag=C9E93_17455 NZ_PYJV01000095.1 Protein Homology CDS 17524 18534 . + 0 ID=cds-WP_080222968.1;Parent=gene-C9E93_RS17010;Dbxref=GenBank:WP_080222968.1;Name=WP_080222968.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9E93_RS17010;product=SPI-2 type III secretion system effector SifA;protein_id=WP_080222968.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 18850 19629 . + . ID=gene-C9E93_RS17015;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9E93_RS17015;old_locus_tag=C9E93_17460 NZ_PYJV01000095.1 Protein Homology CDS 18850 19629 . + 0 ID=cds-WP_000580299.1;Parent=gene-C9E93_RS17015;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9E93_RS17015;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 19654 20700 . + . ID=gene-C9E93_RS17020;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9E93_RS17020;old_locus_tag=C9E93_17465 NZ_PYJV01000095.1 Protein Homology CDS 19654 20700 . + 0 ID=cds-WP_000759329.1;Parent=gene-C9E93_RS17020;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9E93_RS17020;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 20782 21603 . - . ID=gene-C9E93_RS17025;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9E93_RS17025;old_locus_tag=C9E93_17470 NZ_PYJV01000095.1 Protein Homology CDS 20782 21603 . - 0 ID=cds-WP_001191856.1;Parent=gene-C9E93_RS17025;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9E93_RS17025;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 21622 22533 . - . ID=gene-C9E93_RS17030;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9E93_RS17030;old_locus_tag=C9E93_17475 NZ_PYJV01000095.1 Protein Homology CDS 21622 22533 . - 0 ID=cds-WP_000291331.1;Parent=gene-C9E93_RS17030;Dbxref=GenBank:WP_000291331.1;Name=WP_000291331.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9E93_RS17030;product=N-acetylglucosamine kinase;protein_id=WP_000291331.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 22562 23806 . - . ID=gene-C9E93_RS17035;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9E93_RS17035;old_locus_tag=C9E93_17480 NZ_PYJV01000095.1 Protein Homology CDS 22562 23806 . - 0 ID=cds-WP_000168091.1;Parent=gene-C9E93_RS17035;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9E93_RS17035;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 23806 24507 . - . ID=gene-C9E93_RS17040;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9E93_RS17040;old_locus_tag=C9E93_17485 NZ_PYJV01000095.1 Protein Homology CDS 23806 24507 . - 0 ID=cds-WP_001033714.1;Parent=gene-C9E93_RS17040;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9E93_RS17040;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 24500 25699 . - . ID=gene-C9E93_RS17045;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9E93_RS17045;old_locus_tag=C9E93_17490 NZ_PYJV01000095.1 Protein Homology CDS 24500 25699 . - 0 ID=cds-WP_001518787.1;Parent=gene-C9E93_RS17045;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9E93_RS17045;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 26037 29483 . + . ID=gene-C9E93_RS17050;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9E93_RS17050;old_locus_tag=C9E93_17495 NZ_PYJV01000095.1 Protein Homology CDS 26037 29483 . + 0 ID=cds-WP_001114323.1;Parent=gene-C9E93_RS17050;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9E93_RS17050;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 29631 30596 . + . ID=gene-C9E93_RS17055;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=C9E93_RS17055;old_locus_tag=C9E93_17500 NZ_PYJV01000095.1 Protein Homology CDS 29631 30596 . + 0 ID=cds-WP_000482961.1;Parent=gene-C9E93_RS17055;Dbxref=GenBank:WP_000482961.1;Name=WP_000482961.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9E93_RS17055;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482961.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 30693 30950 . - . ID=gene-C9E93_RS17060;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=C9E93_RS17060;old_locus_tag=C9E93_17505 NZ_PYJV01000095.1 Protein Homology CDS 30693 30950 . - 0 ID=cds-WP_000800134.1;Parent=gene-C9E93_RS17060;Dbxref=GenBank:WP_000800134.1;Name=WP_000800134.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9E93_RS17060;product=multiple stress resistance protein BhsA;protein_id=WP_000800134.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 31192 31827 . + . ID=gene-C9E93_RS17065;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=C9E93_RS17065;old_locus_tag=C9E93_17510 NZ_PYJV01000095.1 Protein Homology CDS 31192 31827 . + 0 ID=cds-WP_135370364.1;Parent=gene-C9E93_RS17065;Dbxref=GenBank:WP_135370364.1;Name=WP_135370364.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835112.1;locus_tag=C9E93_RS17065;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_135370364.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 31902 32441 . - . ID=gene-C9E93_RS17070;Name=C9E93_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17070;old_locus_tag=C9E93_17515 NZ_PYJV01000095.1 Protein Homology CDS 31902 32441 . - 0 ID=cds-WP_001043449.1;Parent=gene-C9E93_RS17070;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9E93_RS17070;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 32620 33924 . - . ID=gene-C9E93_RS17075;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9E93_RS17075;old_locus_tag=C9E93_17520 NZ_PYJV01000095.1 Protein Homology CDS 32620 33924 . - 0 ID=cds-WP_000211053.1;Parent=gene-C9E93_RS17075;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9E93_RS17075;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 34178 34720 . - . ID=gene-C9E93_RS17080;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9E93_RS17080;old_locus_tag=C9E93_17525 NZ_PYJV01000095.1 Protein Homology CDS 34178 34720 . - 0 ID=cds-WP_000587945.1;Parent=gene-C9E93_RS17080;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9E93_RS17080;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 34745 35770 . - . ID=gene-C9E93_RS17085;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9E93_RS17085;old_locus_tag=C9E93_17530 NZ_PYJV01000095.1 Protein Homology CDS 34745 35770 . - 0 ID=cds-WP_000529342.1;Parent=gene-C9E93_RS17085;Dbxref=GenBank:WP_000529342.1;Name=WP_000529342.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9E93_RS17085;product=beta-N-acetylhexosaminidase;protein_id=WP_000529342.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 35781 36605 . - . ID=gene-C9E93_RS17090;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9E93_RS17090;old_locus_tag=C9E93_17535 NZ_PYJV01000095.1 Protein Homology CDS 35781 36605 . - 0 ID=cds-WP_001257320.1;Parent=gene-C9E93_RS17090;Dbxref=GenBank:WP_001257320.1;Name=WP_001257320.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9E93_RS17090;product=thiamine kinase;protein_id=WP_001257320.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 36586 37224 . - . ID=gene-C9E93_RS17095;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9E93_RS17095;old_locus_tag=C9E93_17540 NZ_PYJV01000095.1 Protein Homology CDS 36586 37224 . - 0 ID=cds-WP_000164359.1;Parent=gene-C9E93_RS17095;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9E93_RS17095;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 37238 37612 . - . ID=gene-C9E93_RS17100;Name=C9E93_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17100;old_locus_tag=C9E93_17545 NZ_PYJV01000095.1 Protein Homology CDS 37238 37612 . - 0 ID=cds-WP_000589563.1;Parent=gene-C9E93_RS17100;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9E93_RS17100;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 37615 37974 . - . ID=gene-C9E93_RS17105;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9E93_RS17105;old_locus_tag=C9E93_17550 NZ_PYJV01000095.1 Protein Homology CDS 37615 37974 . - 0 ID=cds-WP_001532068.1;Parent=gene-C9E93_RS17105;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9E93_RS17105;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 38316 40490 . + . ID=gene-C9E93_RS17110;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=C9E93_RS17110;old_locus_tag=C9E93_17555 NZ_PYJV01000095.1 Protein Homology CDS 38316 40490 . + 0 ID=cds-WP_023182047.1;Parent=gene-C9E93_RS17110;Dbxref=GenBank:WP_023182047.1;Name=WP_023182047.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9E93_RS17110;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_023182047.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 40575 42008 . - . ID=gene-C9E93_RS17115;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9E93_RS17115;old_locus_tag=C9E93_17560 NZ_PYJV01000095.1 Protein Homology CDS 40575 42008 . - 0 ID=cds-WP_000475705.1;Parent=gene-C9E93_RS17115;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9E93_RS17115;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 42303 43100 . - . ID=gene-C9E93_RS17120;Name=C9E93_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17120;old_locus_tag=C9E93_17565 NZ_PYJV01000095.1 Protein Homology CDS 42303 43100 . - 0 ID=cds-WP_000480268.1;Parent=gene-C9E93_RS17120;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9E93_RS17120;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 43111 44115 . - . ID=gene-C9E93_RS17125;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9E93_RS17125;old_locus_tag=C9E93_17570 NZ_PYJV01000095.1 Protein Homology CDS 43111 44115 . - 0 ID=cds-WP_058107545.1;Parent=gene-C9E93_RS17125;Dbxref=GenBank:WP_058107545.1;Name=WP_058107545.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9E93_RS17125;product=DNA polymerase III subunit delta';protein_id=WP_058107545.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 44112 44753 . - . ID=gene-C9E93_RS17130;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9E93_RS17130;old_locus_tag=C9E93_17575 NZ_PYJV01000095.1 Protein Homology CDS 44112 44753 . - 0 ID=cds-WP_000535399.1;Parent=gene-C9E93_RS17130;Dbxref=GenBank:WP_000535399.1;Name=WP_000535399.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9E93_RS17130;product=dTMP kinase;protein_id=WP_000535399.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 44743 45765 . - . ID=gene-C9E93_RS17135;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9E93_RS17135;old_locus_tag=C9E93_17580 NZ_PYJV01000095.1 Protein Homology CDS 44743 45765 . - 0 ID=cds-WP_000736459.1;Parent=gene-C9E93_RS17135;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9E93_RS17135;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 45768 46577 . - . ID=gene-C9E93_RS17140;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9E93_RS17140;old_locus_tag=C9E93_17585 NZ_PYJV01000095.1 Protein Homology CDS 45768 46577 . - 0 ID=cds-WP_135370363.1;Parent=gene-C9E93_RS17140;Dbxref=GenBank:WP_135370363.1;Name=WP_135370363.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9E93_RS17140;product=aminodeoxychorismate lyase;protein_id=WP_135370363.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 46701 47942 . - . ID=gene-C9E93_RS17145;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9E93_RS17145;old_locus_tag=C9E93_17590 NZ_PYJV01000095.1 Protein Homology CDS 46701 47942 . - 0 ID=cds-WP_080178330.1;Parent=gene-C9E93_RS17145;Dbxref=GenBank:WP_080178330.1;Name=WP_080178330.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9E93_RS17145;product=beta-ketoacyl-ACP synthase II;protein_id=WP_080178330.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 48028 48264 . - . ID=gene-C9E93_RS17150;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9E93_RS17150;old_locus_tag=C9E93_17595 NZ_PYJV01000095.1 Protein Homology CDS 48028 48264 . - 0 ID=cds-WP_000103754.1;Parent=gene-C9E93_RS17150;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9E93_RS17150;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 48420 49154 . - . ID=gene-C9E93_RS17155;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9E93_RS17155;old_locus_tag=C9E93_17600 NZ_PYJV01000095.1 Protein Homology CDS 48420 49154 . - 0 ID=cds-WP_000007236.1;Parent=gene-C9E93_RS17155;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9E93_RS17155;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 49167 50096 . - . ID=gene-C9E93_RS17160;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9E93_RS17160;old_locus_tag=C9E93_17605 NZ_PYJV01000095.1 Protein Homology CDS 49167 50096 . - 0 ID=cds-WP_000191343.1;Parent=gene-C9E93_RS17160;Dbxref=GenBank:WP_000191343.1;Name=WP_000191343.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9E93_RS17160;product=ACP S-malonyltransferase;protein_id=WP_000191343.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 50112 51065 . - . ID=gene-C9E93_RS17165;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9E93_RS17165;old_locus_tag=C9E93_17610 NZ_PYJV01000095.1 Protein Homology CDS 50112 51065 . - 0 ID=cds-WP_000288148.1;Parent=gene-C9E93_RS17165;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9E93_RS17165;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 51145 52224 . - . ID=gene-C9E93_RS17170;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9E93_RS17170;old_locus_tag=C9E93_17615 NZ_PYJV01000095.1 Protein Homology CDS 51145 52224 . - 0 ID=cds-WP_001518286.1;Parent=gene-C9E93_RS17170;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9E93_RS17170;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 52358 52531 . - . ID=gene-C9E93_RS17175;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9E93_RS17175;old_locus_tag=C9E93_17620 NZ_PYJV01000095.1 Protein Homology CDS 52358 52531 . - 0 ID=cds-WP_000290727.1;Parent=gene-C9E93_RS17175;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9E93_RS17175;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 52583 53104 . - . ID=gene-C9E93_RS17180;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9E93_RS17180;old_locus_tag=C9E93_17625 NZ_PYJV01000095.1 Protein Homology CDS 52583 53104 . - 0 ID=cds-WP_001174492.1;Parent=gene-C9E93_RS17180;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9E93_RS17180;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 53302 53886 . + . ID=gene-C9E93_RS17185;Name=C9E93_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17185;old_locus_tag=C9E93_17630 NZ_PYJV01000095.1 Protein Homology CDS 53302 53886 . + 0 ID=cds-WP_001137605.1;Parent=gene-C9E93_RS17185;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9E93_RS17185;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 53958 54182 . - . ID=gene-C9E93_RS17190;Name=C9E93_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17190;old_locus_tag=C9E93_17635 NZ_PYJV01000095.1 GeneMarkS-2+ CDS 53958 54182 . - 0 ID=cds-WP_000528431.1;Parent=gene-C9E93_RS17190;Dbxref=GenBank:WP_000528431.1;Name=WP_000528431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS17190;product=hypothetical protein;protein_id=WP_000528431.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 54385 55128 . - . ID=gene-C9E93_RS17195;Name=C9E93_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17195;old_locus_tag=C9E93_17640 NZ_PYJV01000095.1 Protein Homology CDS 54385 55128 . - 0 ID=cds-WP_077918062.1;Parent=gene-C9E93_RS17195;Dbxref=GenBank:WP_077918062.1;Name=WP_077918062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9E93_RS17195;product=DUF3053 domain-containing protein;protein_id=WP_077918062.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 55284 56243 . - . ID=gene-C9E93_RS17200;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9E93_RS17200;old_locus_tag=C9E93_17645 NZ_PYJV01000095.1 Protein Homology CDS 55284 56243 . - 0 ID=cds-WP_000846314.1;Parent=gene-C9E93_RS17200;Dbxref=GenBank:WP_000846314.1;Name=WP_000846314.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9E93_RS17200;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846314.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 56817 60023 . + . ID=gene-C9E93_RS17210;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9E93_RS17210;old_locus_tag=C9E93_17655 NZ_PYJV01000095.1 Protein Homology CDS 56817 60023 . + 0 ID=cds-WP_135370362.1;Parent=gene-C9E93_RS17210;Dbxref=GenBank:WP_135370362.1;Name=WP_135370362.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9E93_RS17210;product=ribonuclease E;protein_id=WP_135370362.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 60280 61233 . - . ID=gene-C9E93_RS17215;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9E93_RS17215;old_locus_tag=C9E93_17665 NZ_PYJV01000095.1 Protein Homology CDS 60280 61233 . - 0 ID=cds-WP_001223032.1;Parent=gene-C9E93_RS17215;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9E93_RS17215;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 61248 62909 . - . ID=gene-C9E93_RS17220;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9E93_RS17220;old_locus_tag=C9E93_17670 NZ_PYJV01000095.1 Protein Homology CDS 61248 62909 . - 0 ID=cds-WP_000096425.1;Parent=gene-C9E93_RS17220;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9E93_RS17220;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 62974 63924 . - . ID=gene-C9E93_RS17225;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9E93_RS17225;old_locus_tag=C9E93_17675 NZ_PYJV01000095.1 Protein Homology CDS 62974 63924 . - 0 ID=cds-WP_000578685.1;Parent=gene-C9E93_RS17225;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9E93_RS17225;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 63924 65021 . - . ID=gene-C9E93_RS17230;Name=C9E93_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17230;old_locus_tag=C9E93_17680 NZ_PYJV01000095.1 Protein Homology CDS 63924 65021 . - 0 ID=cds-WP_001518955.1;Parent=gene-C9E93_RS17230;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9E93_RS17230;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 65033 65731 . - . ID=gene-C9E93_RS17235;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=C9E93_RS17235;old_locus_tag=C9E93_17685 NZ_PYJV01000095.1 Protein Homology CDS 65033 65731 . - 0 ID=cds-WP_001174897.1;Parent=gene-C9E93_RS17235;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9E93_RS17235;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 65786 66568 . - . ID=gene-C9E93_RS17240;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9E93_RS17240;old_locus_tag=C9E93_17690 NZ_PYJV01000095.1 Protein Homology CDS 65786 66568 . - 0 ID=cds-WP_000625851.1;Parent=gene-C9E93_RS17240;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9E93_RS17240;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 66582 67337 . - . ID=gene-C9E93_RS17245;Name=C9E93_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17245;old_locus_tag=C9E93_17695 NZ_PYJV01000095.1 Protein Homology CDS 66582 67337 . - 0 ID=cds-WP_000349278.1;Parent=gene-C9E93_RS17245;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9E93_RS17245;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 67358 68575 . - . ID=gene-C9E93_RS17250;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9E93_RS17250;old_locus_tag=C9E93_17700 NZ_PYJV01000095.1 Protein Homology CDS 67358 68575 . - 0 ID=cds-WP_017440965.1;Parent=gene-C9E93_RS17250;Dbxref=GenBank:WP_017440965.1;Name=WP_017440965.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9E93_RS17250;product=flagellar hook protein FlgE;protein_id=WP_017440965.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 68602 69300 . - . ID=gene-C9E93_RS17255;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9E93_RS17255;old_locus_tag=C9E93_17705 NZ_PYJV01000095.1 Protein Homology CDS 68602 69300 . - 0 ID=cds-WP_000020450.1;Parent=gene-C9E93_RS17255;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9E93_RS17255;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 69312 69716 . - . ID=gene-C9E93_RS17260;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9E93_RS17260;old_locus_tag=C9E93_17710 NZ_PYJV01000095.1 Protein Homology CDS 69312 69716 . - 0 ID=cds-WP_001196448.1;Parent=gene-C9E93_RS17260;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9E93_RS17260;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 69720 70136 . - . ID=gene-C9E93_RS17265;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9E93_RS17265;old_locus_tag=C9E93_17715 NZ_PYJV01000095.1 Protein Homology CDS 69720 70136 . - 0 ID=cds-WP_000887041.1;Parent=gene-C9E93_RS17265;Dbxref=GenBank:WP_000887041.1;Name=WP_000887041.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9E93_RS17265;product=flagellar basal body rod protein FlgB;protein_id=WP_000887041.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 70293 70952 . + . ID=gene-C9E93_RS17270;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9E93_RS17270;old_locus_tag=C9E93_17725 NZ_PYJV01000095.1 Protein Homology CDS 70293 70952 . + 0 ID=cds-WP_135370361.1;Parent=gene-C9E93_RS17270;Dbxref=GenBank:WP_135370361.1;Name=WP_135370361.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9E93_RS17270;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_135370361.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 71044 71337 . + . ID=gene-C9E93_RS17275;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9E93_RS17275;old_locus_tag=C9E93_17730 NZ_PYJV01000095.1 Protein Homology CDS 71044 71337 . + 0 ID=cds-WP_000020893.1;Parent=gene-C9E93_RS17275;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9E93_RS17275;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 71342 71764 . + . ID=gene-C9E93_RS17280;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=C9E93_RS17280;old_locus_tag=C9E93_17735 NZ_PYJV01000095.1 Protein Homology CDS 71342 71764 . + 0 ID=cds-WP_000197547.1;Parent=gene-C9E93_RS17280;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9E93_RS17280;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 71846 73381 . - . ID=gene-C9E93_RS17285;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=C9E93_RS17285;old_locus_tag=C9E93_17740 NZ_PYJV01000095.1 Protein Homology CDS 71846 73381 . - 0 ID=cds-WP_001537775.1;Parent=gene-C9E93_RS17285;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9E93_RS17285;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 73685 74608 . - . ID=gene-C9E93_RS17290;Name=C9E93_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17290;old_locus_tag=C9E93_17745 NZ_PYJV01000095.1 Protein Homology CDS 73685 74608 . - 0 ID=cds-WP_135370360.1;Parent=gene-C9E93_RS17290;Dbxref=GenBank:WP_135370360.1;Name=WP_135370360.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9E93_RS17290;product=Gfo/Idh/MocA family protein;protein_id=WP_135370360.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 74610 75257 . - . ID=gene-C9E93_RS17295;Name=C9E93_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17295;old_locus_tag=C9E93_17750 NZ_PYJV01000095.1 Protein Homology CDS 74610 75257 . - 0 ID=cds-WP_000873047.1;Parent=gene-C9E93_RS17295;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9E93_RS17295;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 75293 75877 . - . ID=gene-C9E93_RS17300;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9E93_RS17300;old_locus_tag=C9E93_17755 NZ_PYJV01000095.1 Protein Homology CDS 75293 75877 . - 0 ID=cds-WP_000468204.1;Parent=gene-C9E93_RS17300;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9E93_RS17300;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 76114 77322 . + . ID=gene-C9E93_RS17305;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9E93_RS17305;old_locus_tag=C9E93_17760 NZ_PYJV01000095.1 Protein Homology CDS 76114 77322 . + 0 ID=cds-WP_000092178.1;Parent=gene-C9E93_RS17305;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9E93_RS17305;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 77386 78033 . + . ID=gene-C9E93_RS17310;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9E93_RS17310;old_locus_tag=C9E93_17765 NZ_PYJV01000095.1 Protein Homology CDS 77386 78033 . + 0 ID=cds-WP_000780893.1;Parent=gene-C9E93_RS17310;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9E93_RS17310;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 78158 78718 . + . ID=gene-C9E93_RS17315;Name=C9E93_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17315;old_locus_tag=C9E93_17770 NZ_PYJV01000095.1 Protein Homology CDS 78158 78718 . + 0 ID=cds-WP_000713057.1;Parent=gene-C9E93_RS17315;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9E93_RS17315;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 78823 79869 . + . ID=gene-C9E93_RS17320;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9E93_RS17320;old_locus_tag=C9E93_17775 NZ_PYJV01000095.1 Protein Homology CDS 78823 79869 . + 0 ID=cds-WP_079843166.1;Parent=gene-C9E93_RS17320;Dbxref=GenBank:WP_079843166.1;Name=WP_079843166.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9E93_RS17320;product=dihydroorotase;protein_id=WP_079843166.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 79943 80188 . + . ID=gene-C9E93_RS17325;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9E93_RS17325;old_locus_tag=C9E93_17780 NZ_PYJV01000095.1 Protein Homology CDS 79943 80188 . + 0 ID=cds-WP_001217763.1;Parent=gene-C9E93_RS17325;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9E93_RS17325;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 80478 80732 . + . ID=gene-C9E93_RS17330;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9E93_RS17330;old_locus_tag=C9E93_17785 NZ_PYJV01000095.1 Protein Homology CDS 80478 80732 . + 0 ID=cds-WP_000414441.1;Parent=gene-C9E93_RS17330;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9E93_RS17330;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 80845 81963 . + . ID=gene-C9E93_RS17335;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9E93_RS17335;old_locus_tag=C9E93_17790 NZ_PYJV01000095.1 Protein Homology CDS 80845 81963 . + 0 ID=cds-WP_135370690.1;Parent=gene-C9E93_RS17335;Dbxref=GenBank:WP_135370690.1;Name=WP_135370690.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9E93_RS17335;product=N-methyl-L-tryptophan oxidase;protein_id=WP_135370690.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 82004 82117 . + . ID=gene-C9E93_RS17340;Name=C9E93_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17340;old_locus_tag=C9E93_17795 NZ_PYJV01000095.1 Protein Homology CDS 82004 82117 . + 0 ID=cds-WP_001253282.1;Parent=gene-C9E93_RS17340;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9E93_RS17340;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 82380 82952 . + . ID=gene-C9E93_RS17345;Name=C9E93_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17345;old_locus_tag=C9E93_17805 NZ_PYJV01000095.1 Protein Homology CDS 82380 82952 . + 0 ID=cds-WP_001159784.1;Parent=gene-C9E93_RS17345;Dbxref=GenBank:WP_001159784.1;Name=WP_001159784.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9E93_RS17345;product=cytochrome b;protein_id=WP_001159784.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 82949 83524 . + . ID=gene-C9E93_RS17350;Name=C9E93_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17350;old_locus_tag=C9E93_17810 NZ_PYJV01000095.1 Protein Homology CDS 82949 83524 . + 0 ID=cds-WP_000739886.1;Parent=gene-C9E93_RS17350;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9E93_RS17350;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 83576 84628 . - . ID=gene-C9E93_RS17355;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=C9E93_RS17355;old_locus_tag=C9E93_17815 NZ_PYJV01000095.1 Protein Homology CDS 83576 84628 . - 0 ID=cds-WP_001144629.1;Parent=gene-C9E93_RS17355;Dbxref=GenBank:WP_001144629.1;Name=WP_001144629.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9E93_RS17355;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001144629.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 84848 85768 . + . ID=gene-C9E93_RS17360;Name=C9E93_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17360;old_locus_tag=C9E93_17820 NZ_PYJV01000095.1 Protein Homology CDS 84848 85768 . + 0 ID=cds-WP_000163973.1;Parent=gene-C9E93_RS17360;Dbxref=GenBank:WP_000163973.1;Name=WP_000163973.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9E93_RS17360;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163973.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 85923 87137 . + . ID=gene-C9E93_RS17365;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9E93_RS17365;old_locus_tag=C9E93_17830 NZ_PYJV01000095.1 Protein Homology CDS 85923 87137 . + 0 ID=cds-WP_000075053.1;Parent=gene-C9E93_RS17365;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9E93_RS17365;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 87219 87593 . + . ID=gene-C9E93_RS17370;Name=C9E93_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17370;old_locus_tag=C9E93_17835 NZ_PYJV01000095.1 Protein Homology CDS 87219 87593 . + 0 ID=cds-WP_000180050.1;Parent=gene-C9E93_RS17370;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9E93_RS17370;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 87594 87821 . - . ID=gene-C9E93_RS17375;Name=C9E93_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17375;old_locus_tag=C9E93_17840 NZ_PYJV01000095.1 Protein Homology CDS 87594 87821 . - 0 ID=cds-WP_001217832.1;Parent=gene-C9E93_RS17375;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9E93_RS17375;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 87887 90430 . - . ID=gene-C9E93_RS17380;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=C9E93_RS17380;old_locus_tag=C9E93_17845 NZ_PYJV01000095.1 Protein Homology CDS 87887 90430 . - 0 ID=cds-WP_001580605.1;Parent=gene-C9E93_RS17380;Dbxref=GenBank:WP_001580605.1;Name=WP_001580605.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=C9E93_RS17380;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001580605.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 90423 91958 . - . ID=gene-C9E93_RS17385;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9E93_RS17385;old_locus_tag=C9E93_17850 NZ_PYJV01000095.1 Protein Homology CDS 90423 91958 . - 0 ID=cds-WP_001562609.1;Parent=gene-C9E93_RS17385;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9E93_RS17385;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 92230 93384 . + . ID=gene-C9E93_RS17395;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=C9E93_RS17395;old_locus_tag=C9E93_17855 NZ_PYJV01000095.1 Protein Homology CDS 92230 93384 . + 0 ID=cds-WP_135370025.1;Parent=gene-C9E93_RS17395;Dbxref=GenBank:WP_135370025.1;Name=WP_135370025.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9E93_RS17395;product=glucans biosynthesis protein MdoC;protein_id=WP_135370025.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 93401 94888 . - . ID=gene-C9E93_RS17400;Name=C9E93_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17400;old_locus_tag=C9E93_17860 NZ_PYJV01000095.1 Protein Homology CDS 93401 94888 . - 0 ID=cds-WP_135370024.1;Parent=gene-C9E93_RS17400;Dbxref=GenBank:WP_135370024.1;Name=WP_135370024.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9E93_RS17400;product=phospholipase D family protein;protein_id=WP_135370024.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 94824 95363 . - . ID=gene-C9E93_RS17405;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9E93_RS17405;old_locus_tag=C9E93_17865 NZ_PYJV01000095.1 Protein Homology CDS 94824 95363 . - 0 ID=cds-WP_000203941.1;Parent=gene-C9E93_RS17405;Dbxref=GenBank:WP_000203941.1;Name=WP_000203941.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9E93_RS17405;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203941.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 95450 95770 . - . ID=gene-C9E93_RS17410;Name=C9E93_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17410;old_locus_tag=C9E93_17870 NZ_PYJV01000095.1 Protein Homology CDS 95450 95770 . - 0 ID=cds-WP_079945188.1;Parent=gene-C9E93_RS17410;Dbxref=GenBank:WP_079945188.1;Name=WP_079945188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9E93_RS17410;product=type 1 fimbrial protein;protein_id=WP_079945188.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 95901 96227 . - . ID=gene-C9E93_RS17415;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9E93_RS17415;old_locus_tag=C9E93_17875 NZ_PYJV01000095.1 Protein Homology CDS 95901 96227 . - 0 ID=cds-WP_000557256.1;Parent=gene-C9E93_RS17415;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9E93_RS17415;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 96289 96744 . - . ID=gene-C9E93_RS17420;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9E93_RS17420;old_locus_tag=C9E93_17880 NZ_PYJV01000095.1 Protein Homology CDS 96289 96744 . - 0 ID=cds-WP_000771416.1;Parent=gene-C9E93_RS17420;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9E93_RS17420;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_PYJV01000095.1 RefSeq gene 96786 97241 . - . ID=gene-C9E93_RS17425;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9E93_RS17425;old_locus_tag=C9E93_17885 NZ_PYJV01000095.1 Protein Homology CDS 96786 97241 . - 0 ID=cds-WP_000791655.1;Parent=gene-C9E93_RS17425;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9E93_RS17425;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 ##sequence-region NZ_PYJV01000124.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000124.1 RefSeq region 1 777 . + . ID=NZ_PYJV01000124.1:1..777;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000124.1 RefSeq gene 1 438 . - . ID=gene-C9E93_RS22325;Name=C9E93_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22325;old_locus_tag=C9E93_22925;partial=true;start_range=.,1 NZ_PYJV01000124.1 Protein Homology CDS 1 438 . - 0 ID=cds-WP_135400644.1;Parent=gene-C9E93_RS22325;Dbxref=GenBank:WP_135400644.1;Name=WP_135400644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9E93_RS22325;partial=true;product=hypothetical protein;protein_id=WP_135400644.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000018.1 1 686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000018.1 RefSeq region 1 686 . + . ID=NZ_PYJV01000018.1:1..686;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000018.1 RefSeq pseudogene 44 686 . + . ID=gene-C9E93_RS02140;Name=siiD;end_range=686,.;gbkey=Gene;gene=siiD;gene_biotype=pseudogene;locus_tag=C9E93_RS02140;old_locus_tag=C9E93_02225;partial=true;pseudo=true NZ_PYJV01000018.1 Protein Homology CDS 44 686 . + 0 ID=cds-C9E93_RS02140;Parent=gene-C9E93_RS02140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=686,.;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9E93_RS02140;partial=true;product=SPI-4 type I secretion system protein SiiD;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000032.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000032.1 RefSeq region 1 654 . + . ID=NZ_PYJV01000032.1:1..654;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000032.1 RefSeq gene 1 500 . + . ID=gene-C9E93_RS04780;Name=C9E93_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04780;old_locus_tag=C9E93_04950;partial=true;start_range=.,1 NZ_PYJV01000032.1 Protein Homology CDS 1 500 . + 2 ID=cds-WP_303396431.1;Parent=gene-C9E93_RS04780;Dbxref=GenBank:WP_303396431.1;Name=WP_303396431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007766018.1;locus_tag=C9E93_RS04780;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_303396431.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000030.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000030.1 RefSeq region 1 608 . + . ID=NZ_PYJV01000030.1:1..608;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000030.1 RefSeq gene 1 608 . - . ID=gene-C9E93_RS04775;Name=C9E93_RS04775;end_range=608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04775;old_locus_tag=C9E93_04940;partial=true;start_range=.,1 NZ_PYJV01000030.1 Protein Homology CDS 1 608 . - 0 ID=cds-WP_135400590.1;Parent=gene-C9E93_RS04775;Dbxref=GenBank:WP_135400590.1;Name=WP_135400590.1;Ontology_term=GO:0006814,GO:0016829;end_range=608,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=C9E93_RS04775;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135400590.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000086.1 1 589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000086.1 RefSeq region 1 589 . + . ID=NZ_PYJV01000086.1:1..589;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000086.1 RefSeq gene 1 589 . - . ID=gene-C9E93_RS15560;Name=C9E93_RS15560;end_range=589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15560;old_locus_tag=C9E93_15970;partial=true;start_range=.,1 NZ_PYJV01000086.1 Protein Homology CDS 1 589 . - 0 ID=cds-WP_135400623.1;Parent=gene-C9E93_RS15560;Dbxref=GenBank:WP_135400623.1;Name=WP_135400623.1;Ontology_term=GO:0006814,GO:0016829;end_range=589,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E93_RS15560;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135400623.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000067.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000067.1 RefSeq region 1 556 . + . ID=NZ_PYJV01000067.1:1..556;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000067.1 RefSeq gene 108 556 . + . ID=gene-C9E93_RS10840;Name=C9E93_RS10840;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10840;old_locus_tag=C9E93_11120;partial=true NZ_PYJV01000067.1 Protein Homology CDS 108 556 . + 0 ID=cds-WP_135400611.1;Parent=gene-C9E93_RS10840;Dbxref=GenBank:WP_135400611.1;Name=WP_135400611.1;end_range=556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875616.1;locus_tag=C9E93_RS10840;partial=true;product=hypothetical protein;protein_id=WP_135400611.1;transl_table=11 ##sequence-region NZ_PYJV01000010.1 1 452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000010.1 RefSeq region 1 452 . + . ID=NZ_PYJV01000010.1:1..452;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000010.1 RefSeq gene 76 152 . + . ID=gene-C9E93_RS00670;Name=C9E93_RS00670;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00670;old_locus_tag=C9E93_00730 NZ_PYJV01000010.1 tRNAscan-SE tRNA 76 152 . + . ID=rna-C9E93_RS00670;Parent=gene-C9E93_RS00670;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00670;product=tRNA-Ile NZ_PYJV01000010.1 tRNAscan-SE exon 76 152 . + . ID=exon-C9E93_RS00670-1;Parent=rna-C9E93_RS00670;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00670;product=tRNA-Ile NZ_PYJV01000010.1 RefSeq gene 262 337 . + . ID=gene-C9E93_RS00675;Name=C9E93_RS00675;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00675;old_locus_tag=C9E93_00735 NZ_PYJV01000010.1 tRNAscan-SE tRNA 262 337 . + . ID=rna-C9E93_RS00675;Parent=gene-C9E93_RS00675;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00675;product=tRNA-Ala NZ_PYJV01000010.1 tRNAscan-SE exon 262 337 . + . ID=exon-C9E93_RS00675-1;Parent=rna-C9E93_RS00675;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00675;product=tRNA-Ala ##sequence-region NZ_PYJV01000031.1 1 395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000031.1 RefSeq region 1 395 . + . ID=NZ_PYJV01000031.1:1..395;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000031.1 RefSeq pseudogene 24 395 . + . ID=gene-C9E93_RS23665;Name=C9E93_RS23665;end_range=395,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23665;old_locus_tag=C9E93_04945;partial=true;pseudo=true NZ_PYJV01000031.1 GeneMarkS-2+ CDS 24 395 . + 0 ID=cds-C9E93_RS23665;Parent=gene-C9E93_RS23665;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=395,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23665;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000111.1 1 97303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000111.1 RefSeq region 1 97303 . + . ID=NZ_PYJV01000111.1:1..97303;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000111.1 RefSeq gene 1 5375 . + . ID=gene-C9E93_RS20255;Name=C9E93_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20255;old_locus_tag=C9E93_20795;partial=true;start_range=.,1 NZ_PYJV01000111.1 Protein Homology CDS 1 5375 . + 2 ID=cds-WP_135400639.1;Parent=gene-C9E93_RS20255;Dbxref=GenBank:WP_135400639.1;Name=WP_135400639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9E93_RS20255;partial=true;product=autotransporter domain-containing protein;protein_id=WP_135400639.1;start_range=.,1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 5568 5738 . + . ID=gene-C9E93_RS20260;Name=C9E93_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20260;old_locus_tag=C9E93_20800 NZ_PYJV01000111.1 Protein Homology CDS 5568 5738 . + 0 ID=cds-WP_000472323.1;Parent=gene-C9E93_RS20260;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9E93_RS20260;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 5883 6887 . - . ID=gene-C9E93_RS20265;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E93_RS20265;old_locus_tag=C9E93_20805 NZ_PYJV01000111.1 Protein Homology CDS 5883 6887 . - 0 ID=cds-WP_000165562.1;Parent=gene-C9E93_RS20265;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9E93_RS20265;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 6880 7638 . - . ID=gene-C9E93_RS20270;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9E93_RS20270;old_locus_tag=C9E93_20810 NZ_PYJV01000111.1 Protein Homology CDS 6880 7638 . - 0 ID=cds-WP_000359649.1;Parent=gene-C9E93_RS20270;Dbxref=GenBank:WP_000359649.1;Name=WP_000359649.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9E93_RS20270;product=phosphoglycolate phosphatase;protein_id=WP_000359649.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 7631 8308 . - . ID=gene-C9E93_RS20275;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E93_RS20275;old_locus_tag=C9E93_20815 NZ_PYJV01000111.1 Protein Homology CDS 7631 8308 . - 0 ID=cds-WP_000816284.1;Parent=gene-C9E93_RS20275;Dbxref=GenBank:WP_000816284.1;Name=WP_000816284.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9E93_RS20275;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816284.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 8326 9162 . - . ID=gene-C9E93_RS20280;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9E93_RS20280;old_locus_tag=C9E93_20820 NZ_PYJV01000111.1 Protein Homology CDS 8326 9162 . - 0 ID=cds-WP_000742132.1;Parent=gene-C9E93_RS20280;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9E93_RS20280;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 9343 10620 . - . ID=gene-C9E93_RS20285;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9E93_RS20285;old_locus_tag=C9E93_20825 NZ_PYJV01000111.1 Protein Homology CDS 9343 10620 . - 0 ID=cds-WP_135370207.1;Parent=gene-C9E93_RS20285;Dbxref=GenBank:WP_135370207.1;Name=WP_135370207.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9E93_RS20285;product=cell division protein DamX;protein_id=WP_135370207.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 10718 11806 . - . ID=gene-C9E93_RS20290;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9E93_RS20290;old_locus_tag=C9E93_20830 NZ_PYJV01000111.1 Protein Homology CDS 10718 11806 . - 0 ID=cds-WP_000439824.1;Parent=gene-C9E93_RS20290;Dbxref=GenBank:WP_000439824.1;Name=WP_000439824.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9E93_RS20290;product=3-dehydroquinate synthase;protein_id=WP_000439824.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 11863 12384 . - . ID=gene-C9E93_RS20295;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9E93_RS20295;old_locus_tag=C9E93_20835 NZ_PYJV01000111.1 Protein Homology CDS 11863 12384 . - 0 ID=cds-WP_000818621.1;Parent=gene-C9E93_RS20295;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9E93_RS20295;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 12849 14087 . - . ID=gene-C9E93_RS20305;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9E93_RS20305;old_locus_tag=C9E93_20845 NZ_PYJV01000111.1 Protein Homology CDS 12849 14087 . - 0 ID=cds-WP_050067943.1;Parent=gene-C9E93_RS20305;Dbxref=GenBank:WP_050067943.1;Name=WP_050067943.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9E93_RS20305;product=DNA uptake porin HofQ;protein_id=WP_050067943.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 14002 14403 . - . ID=gene-C9E93_RS20310;Name=C9E93_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20310;old_locus_tag=C9E93_20850 NZ_PYJV01000111.1 Protein Homology CDS 14002 14403 . - 0 ID=cds-WP_135370208.1;Parent=gene-C9E93_RS20310;Dbxref=GenBank:WP_135370208.1;Name=WP_135370208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9E93_RS20310;product=HofP DNA utilization family protein;protein_id=WP_135370208.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 14393 14866 . - . ID=gene-C9E93_RS20315;Name=C9E93_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20315;old_locus_tag=C9E93_20855 NZ_PYJV01000111.1 Protein Homology CDS 14393 14866 . - 0 ID=cds-WP_001727862.1;Parent=gene-C9E93_RS20315;Dbxref=GenBank:WP_001727862.1;Name=WP_001727862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9E93_RS20315;product=HofO family protein;protein_id=WP_001727862.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 14850 15389 . - . ID=gene-C9E93_RS20320;Name=C9E93_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20320;old_locus_tag=C9E93_20860 NZ_PYJV01000111.1 Protein Homology CDS 14850 15389 . - 0 ID=cds-WP_135370209.1;Parent=gene-C9E93_RS20320;Dbxref=GenBank:WP_135370209.1;Name=WP_135370209.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9E93_RS20320;product=PilN domain-containing protein;protein_id=WP_135370209.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 15389 16168 . - . ID=gene-C9E93_RS20325;Name=C9E93_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20325;old_locus_tag=C9E93_20865 NZ_PYJV01000111.1 Protein Homology CDS 15389 16168 . - 0 ID=cds-WP_000874746.1;Parent=gene-C9E93_RS20325;Dbxref=GenBank:WP_000874746.1;Name=WP_000874746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9E93_RS20325;product=hypothetical protein;protein_id=WP_000874746.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 16289 18841 . + . ID=gene-C9E93_RS20330;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9E93_RS20330;old_locus_tag=C9E93_20870 NZ_PYJV01000111.1 Protein Homology CDS 16289 18841 . + 0 ID=cds-WP_167851642.1;Parent=gene-C9E93_RS20330;Dbxref=GenBank:WP_167851642.1;Name=WP_167851642.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9E93_RS20330;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_167851642.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 18937 19500 . - . ID=gene-C9E93_RS20335;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9E93_RS20335;old_locus_tag=C9E93_20875 NZ_PYJV01000111.1 Protein Homology CDS 18937 19500 . - 0 ID=cds-WP_000045725.1;Parent=gene-C9E93_RS20335;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9E93_RS20335;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 19823 21955 . + . ID=gene-C9E93_RS20340;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9E93_RS20340;old_locus_tag=C9E93_20880 NZ_PYJV01000111.1 Protein Homology CDS 19823 21955 . + 0 ID=cds-WP_135370211.1;Parent=gene-C9E93_RS20340;Dbxref=GenBank:WP_135370211.1;Name=WP_135370211.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9E93_RS20340;product=intracellular growth attenuator protein IgaA;protein_id=WP_135370211.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 22020 22688 . + . ID=gene-C9E93_RS20345;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9E93_RS20345;old_locus_tag=C9E93_20885 NZ_PYJV01000111.1 Protein Homology CDS 22020 22688 . + 0 ID=cds-WP_001520508.1;Parent=gene-C9E93_RS20345;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9E93_RS20345;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 22699 23100 . + . ID=gene-C9E93_RS20350;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9E93_RS20350;old_locus_tag=C9E93_20890 NZ_PYJV01000111.1 Protein Homology CDS 22699 23100 . + 0 ID=cds-WP_000660723.1;Parent=gene-C9E93_RS20350;Dbxref=GenBank:WP_000660723.1;Name=WP_000660723.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9E93_RS20350;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660723.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 23125 24003 . + . ID=gene-C9E93_RS20355;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9E93_RS20355;old_locus_tag=C9E93_20895 NZ_PYJV01000111.1 Protein Homology CDS 23125 24003 . + 0 ID=cds-WP_076167059.1;Parent=gene-C9E93_RS20355;Dbxref=GenBank:WP_076167059.1;Name=WP_076167059.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9E93_RS20355;product=Hsp33 family molecular chaperone HslO;protein_id=WP_076167059.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 24113 25822 . - . ID=gene-C9E93_RS20360;Name=C9E93_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20360;old_locus_tag=C9E93_20900 NZ_PYJV01000111.1 Protein Homology CDS 24113 25822 . - 0 ID=cds-WP_080081832.1;Parent=gene-C9E93_RS20360;Dbxref=GenBank:WP_080081832.1;Name=WP_080081832.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9E93_RS20360;product=DUF4153 domain-containing protein;protein_id=WP_080081832.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 26202 27821 . + . ID=gene-C9E93_RS20365;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9E93_RS20365;old_locus_tag=C9E93_20905 NZ_PYJV01000111.1 Protein Homology CDS 26202 27821 . + 0 ID=cds-WP_001265689.1;Parent=gene-C9E93_RS20365;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9E93_RS20365;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 27896 29248 . - . ID=gene-C9E93_RS20370;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=C9E93_RS20370;old_locus_tag=C9E93_20910 NZ_PYJV01000111.1 Protein Homology CDS 27896 29248 . - 0 ID=cds-WP_001253818.1;Parent=gene-C9E93_RS20370;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9E93_RS20370;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 29245 29964 . - . ID=gene-C9E93_RS20375;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9E93_RS20375;old_locus_tag=C9E93_20915 NZ_PYJV01000111.1 Protein Homology CDS 29245 29964 . - 0 ID=cds-WP_001157751.1;Parent=gene-C9E93_RS20375;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=C9E93_RS20375;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 30190 30663 . + . ID=gene-C9E93_RS20380;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9E93_RS20380;old_locus_tag=C9E93_20920 NZ_PYJV01000111.1 Protein Homology CDS 30190 30663 . + 0 ID=cds-WP_000856695.1;Parent=gene-C9E93_RS20380;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9E93_RS20380;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 30762 33092 . + . ID=gene-C9E93_RS20385;Name=C9E93_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20385;old_locus_tag=C9E93_20925 NZ_PYJV01000111.1 Protein Homology CDS 30762 33092 . + 0 ID=cds-WP_135370212.1;Parent=gene-C9E93_RS20385;Dbxref=GenBank:WP_135370212.1;Name=WP_135370212.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9E93_RS20385;product=Tex family protein;protein_id=WP_135370212.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 33529 33756 . + . ID=gene-C9E93_RS20390;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9E93_RS20390;old_locus_tag=C9E93_20935 NZ_PYJV01000111.1 Protein Homology CDS 33529 33756 . + 0 ID=cds-WP_001160955.1;Parent=gene-C9E93_RS20390;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9E93_RS20390;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 33775 36093 . + . ID=gene-C9E93_RS20395;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9E93_RS20395;old_locus_tag=C9E93_20940 NZ_PYJV01000111.1 Protein Homology CDS 33775 36093 . + 0 ID=cds-WP_023216665.1;Parent=gene-C9E93_RS20395;Dbxref=GenBank:WP_023216665.1;Name=WP_023216665.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9E93_RS20395;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_023216665.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 36106 36342 . + . ID=gene-C9E93_RS20400;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9E93_RS20400;old_locus_tag=C9E93_20945 NZ_PYJV01000111.1 Protein Homology CDS 36106 36342 . + 0 ID=cds-WP_000157589.1;Parent=gene-C9E93_RS20400;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9E93_RS20400;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 36577 37503 . + . ID=gene-C9E93_RS20405;Name=C9E93_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20405;old_locus_tag=C9E93_20950 NZ_PYJV01000111.1 Protein Homology CDS 36577 37503 . + 0 ID=cds-WP_071054217.1;Parent=gene-C9E93_RS20405;Dbxref=GenBank:WP_071054217.1;Name=WP_071054217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9E93_RS20405;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_071054217.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 37539 38309 . - . ID=gene-C9E93_RS20410;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9E93_RS20410;old_locus_tag=C9E93_20955 NZ_PYJV01000111.1 Protein Homology CDS 37539 38309 . - 0 ID=cds-WP_000998138.1;Parent=gene-C9E93_RS20410;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9E93_RS20410;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 38347 39030 . + . ID=gene-C9E93_RS20415;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9E93_RS20415;old_locus_tag=C9E93_20960 NZ_PYJV01000111.1 Protein Homology CDS 38347 39030 . + 0 ID=cds-WP_000958733.1;Parent=gene-C9E93_RS20415;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9E93_RS20415;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 39089 39664 . + . ID=gene-C9E93_RS20420;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9E93_RS20420;old_locus_tag=C9E93_20965 NZ_PYJV01000111.1 Protein Homology CDS 39089 39664 . + 0 ID=cds-WP_000619387.1;Parent=gene-C9E93_RS20420;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9E93_RS20420;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 40041 41357 . + . ID=gene-C9E93_RS20425;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9E93_RS20425;old_locus_tag=C9E93_20970 NZ_PYJV01000111.1 Protein Homology CDS 40041 41357 . + 0 ID=cds-WP_001131737.1;Parent=gene-C9E93_RS20425;Dbxref=GenBank:WP_001131737.1;Name=WP_001131737.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9E93_RS20425;product=gluconate transporter;protein_id=WP_001131737.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 41476 43554 . - . ID=gene-C9E93_RS20430;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9E93_RS20430;old_locus_tag=C9E93_20975 NZ_PYJV01000111.1 Protein Homology CDS 41476 43554 . - 0 ID=cds-WP_000428719.1;Parent=gene-C9E93_RS20430;Dbxref=GenBank:WP_000428719.1;Name=WP_000428719.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9E93_RS20430;product=4-alpha-glucanotransferase;protein_id=WP_000428719.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 43564 45957 . - . ID=gene-C9E93_RS20435;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=C9E93_RS20435;old_locus_tag=C9E93_20980 NZ_PYJV01000111.1 Protein Homology CDS 43564 45957 . - 0 ID=cds-WP_023181718.1;Parent=gene-C9E93_RS20435;Dbxref=GenBank:WP_023181718.1;Name=WP_023181718.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9E93_RS20435;product=maltodextrin phosphorylase;protein_id=WP_023181718.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 46552 49257 . + . ID=gene-C9E93_RS20440;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=C9E93_RS20440;old_locus_tag=C9E93_20985 NZ_PYJV01000111.1 Protein Homology CDS 46552 49257 . + 0 ID=cds-WP_000907030.1;Parent=gene-C9E93_RS20440;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9E93_RS20440;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 49399 49959 . - . ID=gene-C9E93_RS20445;Name=C9E93_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20445;old_locus_tag=C9E93_20990 NZ_PYJV01000111.1 Protein Homology CDS 49399 49959 . - 0 ID=cds-WP_023254574.1;Parent=gene-C9E93_RS20445;Dbxref=GenBank:WP_023254574.1;Name=WP_023254574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=C9E93_RS20445;product=hypothetical protein;protein_id=WP_023254574.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 49956 50990 . - . ID=gene-C9E93_RS20450;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=C9E93_RS20450;old_locus_tag=C9E93_20995 NZ_PYJV01000111.1 Protein Homology CDS 49956 50990 . - 0 ID=cds-WP_135400640.1;Parent=gene-C9E93_RS20450;Dbxref=GenBank:WP_135400640.1;Name=WP_135400640.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=C9E93_RS20450;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_135400640.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 50994 52208 . - . ID=gene-C9E93_RS20455;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=C9E93_RS20455;old_locus_tag=C9E93_21000 NZ_PYJV01000111.1 Protein Homology CDS 50994 52208 . - 0 ID=cds-WP_001105531.1;Parent=gene-C9E93_RS20455;Dbxref=GenBank:WP_001105531.1;Name=WP_001105531.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=C9E93_RS20455;product=RNA-splicing ligase RtcB;protein_id=WP_001105531.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 52556 54109 . - . ID=gene-C9E93_RS20460;Name=C9E93_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20460;old_locus_tag=C9E93_21005 NZ_PYJV01000111.1 Protein Homology CDS 52556 54109 . - 0 ID=cds-WP_135370359.1;Parent=gene-C9E93_RS20460;Dbxref=GenBank:WP_135370359.1;Name=WP_135370359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9E93_RS20460;product=vWA domain-containing protein;protein_id=WP_135370359.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 54299 55882 . + . ID=gene-C9E93_RS20465;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=C9E93_RS20465;old_locus_tag=C9E93_21010 NZ_PYJV01000111.1 Protein Homology CDS 54299 55882 . + 0 ID=cds-WP_001232870.1;Parent=gene-C9E93_RS20465;Dbxref=GenBank:WP_001232870.1;Name=WP_001232870.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9E93_RS20465;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232870.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 55879 56637 . - . ID=gene-C9E93_RS20470;Name=C9E93_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20470;old_locus_tag=C9E93_21015 NZ_PYJV01000111.1 Protein Homology CDS 55879 56637 . - 0 ID=cds-WP_000815085.1;Parent=gene-C9E93_RS20470;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9E93_RS20470;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 56731 57561 . - . ID=gene-C9E93_RS20475;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9E93_RS20475;old_locus_tag=C9E93_21020 NZ_PYJV01000111.1 Protein Homology CDS 56731 57561 . - 0 ID=cds-WP_000928702.1;Parent=gene-C9E93_RS20475;Dbxref=GenBank:WP_000928702.1;Name=WP_000928702.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9E93_RS20475;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928702.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 57637 57963 . - . ID=gene-C9E93_RS20480;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9E93_RS20480;old_locus_tag=C9E93_21025 NZ_PYJV01000111.1 Protein Homology CDS 57637 57963 . - 0 ID=cds-WP_000434523.1;Parent=gene-C9E93_RS20480;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9E93_RS20480;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 58162 59670 . + . ID=gene-C9E93_RS20485;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9E93_RS20485;old_locus_tag=C9E93_21030 NZ_PYJV01000111.1 Protein Homology CDS 58162 59670 . + 0 ID=cds-WP_000448180.1;Parent=gene-C9E93_RS20485;Dbxref=GenBank:WP_000448180.1;Name=WP_000448180.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9E93_RS20485;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448180.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 59717 60262 . - . ID=gene-C9E93_RS20490;Name=C9E93_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20490;old_locus_tag=C9E93_21035 NZ_PYJV01000111.1 Protein Homology CDS 59717 60262 . - 0 ID=cds-WP_135370676.1;Parent=gene-C9E93_RS20490;Dbxref=GenBank:WP_135370676.1;Name=WP_135370676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9E93_RS20490;product=hypothetical protein;protein_id=WP_135370676.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 60272 61768 . - . ID=gene-C9E93_RS20495;Name=C9E93_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20495;old_locus_tag=C9E93_21040 NZ_PYJV01000111.1 Protein Homology CDS 60272 61768 . - 0 ID=cds-WP_000786259.1;Parent=gene-C9E93_RS20495;Dbxref=GenBank:WP_000786259.1;Name=WP_000786259.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=C9E93_RS20495;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_000786259.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 61926 63035 . - . ID=gene-C9E93_RS20500;Name=C9E93_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20500;old_locus_tag=C9E93_21045 NZ_PYJV01000111.1 Protein Homology CDS 61926 63035 . - 0 ID=cds-WP_000258839.1;Parent=gene-C9E93_RS20500;Dbxref=GenBank:WP_000258839.1;Name=WP_000258839.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=C9E93_RS20500;product=glycerol dehydrogenase;protein_id=WP_000258839.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 63373 64707 . + . ID=gene-C9E93_RS20505;Name=C9E93_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20505;old_locus_tag=C9E93_21050 NZ_PYJV01000111.1 Protein Homology CDS 63373 64707 . + 0 ID=cds-WP_001518078.1;Parent=gene-C9E93_RS20505;Dbxref=GenBank:WP_001518078.1;Name=WP_001518078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9E93_RS20505;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 64704 66419 . + . ID=gene-C9E93_RS20510;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E93_RS20510;old_locus_tag=C9E93_21055 NZ_PYJV01000111.1 Protein Homology CDS 64704 66419 . + 0 ID=cds-WP_000078497.1;Parent=gene-C9E93_RS20510;Dbxref=GenBank:WP_000078497.1;Name=WP_000078497.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9E93_RS20510;product=dihydroxy-acid dehydratase;protein_id=WP_000078497.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 66463 67368 . + . ID=gene-C9E93_RS20515;Name=C9E93_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20515;old_locus_tag=C9E93_21060 NZ_PYJV01000111.1 Protein Homology CDS 66463 67368 . + 0 ID=cds-WP_000192193.1;Parent=gene-C9E93_RS20515;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=C9E93_RS20515;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 67412 68167 . - . ID=gene-C9E93_RS20520;Name=C9E93_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20520;old_locus_tag=C9E93_21065 NZ_PYJV01000111.1 Protein Homology CDS 67412 68167 . - 0 ID=cds-WP_000724553.1;Parent=gene-C9E93_RS20520;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=C9E93_RS20520;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 68345 70792 . - . ID=gene-C9E93_RS20525;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9E93_RS20525;old_locus_tag=C9E93_21070 NZ_PYJV01000111.1 Protein Homology CDS 68345 70792 . - 0 ID=cds-WP_000993428.1;Parent=gene-C9E93_RS20525;Dbxref=GenBank:WP_000993428.1;Name=WP_000993428.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9E93_RS20525;product=glycogen phosphorylase;protein_id=WP_000993428.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 70812 72245 . - . ID=gene-C9E93_RS20530;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9E93_RS20530;old_locus_tag=C9E93_21075 NZ_PYJV01000111.1 Protein Homology CDS 70812 72245 . - 0 ID=cds-WP_001197669.1;Parent=gene-C9E93_RS20530;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9E93_RS20530;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 72245 73540 . - . ID=gene-C9E93_RS20535;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9E93_RS20535;old_locus_tag=C9E93_21080 NZ_PYJV01000111.1 Protein Homology CDS 72245 73540 . - 0 ID=cds-WP_000253995.1;Parent=gene-C9E93_RS20535;Dbxref=GenBank:WP_000253995.1;Name=WP_000253995.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9E93_RS20535;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253995.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 73555 75531 . - . ID=gene-C9E93_RS20540;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E93_RS20540;old_locus_tag=C9E93_21085 NZ_PYJV01000111.1 Protein Homology CDS 73555 75531 . - 0 ID=cds-WP_000192491.1;Parent=gene-C9E93_RS20540;Dbxref=GenBank:WP_000192491.1;Name=WP_000192491.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9E93_RS20540;product=glycogen debranching protein GlgX;protein_id=WP_000192491.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 75528 77714 . - . ID=gene-C9E93_RS20545;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9E93_RS20545;old_locus_tag=C9E93_21090 NZ_PYJV01000111.1 Protein Homology CDS 75528 77714 . - 0 ID=cds-WP_000098552.1;Parent=gene-C9E93_RS20545;Dbxref=GenBank:WP_000098552.1;Name=WP_000098552.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9E93_RS20545;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098552.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 78092 79198 . - . ID=gene-C9E93_RS20550;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E93_RS20550;old_locus_tag=C9E93_21095 NZ_PYJV01000111.1 Protein Homology CDS 78092 79198 . - 0 ID=cds-WP_000799940.1;Parent=gene-C9E93_RS20550;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9E93_RS20550;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_PYJV01000111.1 RefSeq pseudogene 79325 79699 . + . ID=gene-C9E93_RS20555;Name=C9E93_RS20555;end_range=79699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS20555;old_locus_tag=C9E93_21100;partial=true;pseudo=true NZ_PYJV01000111.1 Protein Homology CDS 79325 79699 . + 0 ID=cds-C9E93_RS20555;Parent=gene-C9E93_RS20555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=79699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9E93_RS20555;partial=true;product=MarC family protein;pseudo=true;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 79622 80962 . - . ID=gene-C9E93_RS20560;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9E93_RS20560;old_locus_tag=C9E93_21105 NZ_PYJV01000111.1 Protein Homology CDS 79622 80962 . - 0 ID=cds-WP_000105950.1;Parent=gene-C9E93_RS20560;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9E93_RS20560;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 80959 81492 . - . ID=gene-C9E93_RS20565;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9E93_RS20565;old_locus_tag=C9E93_21110 NZ_PYJV01000111.1 Protein Homology CDS 80959 81492 . - 0 ID=cds-WP_135370675.1;Parent=gene-C9E93_RS20565;Dbxref=GenBank:WP_135370675.1;Name=WP_135370675.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9E93_RS20565;product=gluconokinase;protein_id=WP_135370675.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 81631 82626 . - . ID=gene-C9E93_RS20570;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9E93_RS20570;old_locus_tag=C9E93_21115 NZ_PYJV01000111.1 Protein Homology CDS 81631 82626 . - 0 ID=cds-WP_000730239.1;Parent=gene-C9E93_RS20570;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9E93_RS20570;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 82756 83451 . - . ID=gene-C9E93_RS20575;Name=C9E93_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20575;old_locus_tag=C9E93_21120 NZ_PYJV01000111.1 Protein Homology CDS 82756 83451 . - 0 ID=cds-WP_000639789.1;Parent=gene-C9E93_RS20575;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9E93_RS20575;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 83575 84612 . - . ID=gene-C9E93_RS20580;Name=C9E93_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20580;old_locus_tag=C9E93_21125 NZ_PYJV01000111.1 Protein Homology CDS 83575 84612 . - 0 ID=cds-WP_079834613.1;Parent=gene-C9E93_RS20580;Dbxref=GenBank:WP_079834613.1;Name=WP_079834613.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9E93_RS20580;product=oxidoreductase;protein_id=WP_079834613.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 85080 85568 . + . ID=gene-C9E93_RS20585;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9E93_RS20585;old_locus_tag=C9E93_21130 NZ_PYJV01000111.1 Protein Homology CDS 85080 85568 . + 0 ID=cds-WP_001290286.1;Parent=gene-C9E93_RS20585;Dbxref=GenBank:WP_001290286.1;Name=WP_001290286.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9E93_RS20585;product=N-acetyltransferase;protein_id=WP_001290286.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 85833 87047 . + . ID=gene-C9E93_RS20590;Name=C9E93_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20590;old_locus_tag=C9E93_21135 NZ_PYJV01000111.1 Protein Homology CDS 85833 87047 . + 0 ID=cds-WP_131040271.1;Parent=gene-C9E93_RS20590;Dbxref=GenBank:WP_131040271.1;Name=WP_131040271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9E93_RS20590;product=PfkB family carbohydrate kinase;protein_id=WP_131040271.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 87063 87824 . + . ID=gene-C9E93_RS20595;Name=C9E93_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20595;old_locus_tag=C9E93_21140 NZ_PYJV01000111.1 Protein Homology CDS 87063 87824 . + 0 ID=cds-WP_001066509.1;Parent=gene-C9E93_RS20595;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9E93_RS20595;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 87878 88849 . + . ID=gene-C9E93_RS20600;Name=C9E93_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20600;old_locus_tag=C9E93_21145 NZ_PYJV01000111.1 Protein Homology CDS 87878 88849 . + 0 ID=cds-WP_001038949.1;Parent=gene-C9E93_RS20600;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9E93_RS20600;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 88846 89880 . + . ID=gene-C9E93_RS20605;Name=C9E93_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20605;old_locus_tag=C9E93_21150 NZ_PYJV01000111.1 Protein Homology CDS 88846 89880 . + 0 ID=cds-WP_135370674.1;Parent=gene-C9E93_RS20605;Dbxref=GenBank:WP_135370674.1;Name=WP_135370674.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9E93_RS20605;product=phosphotriesterase family protein;protein_id=WP_135370674.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 89925 91667 . - . ID=gene-C9E93_RS20610;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9E93_RS20610;old_locus_tag=C9E93_21155 NZ_PYJV01000111.1 Protein Homology CDS 89925 91667 . - 0 ID=cds-WP_135370673.1;Parent=gene-C9E93_RS20610;Dbxref=GenBank:WP_135370673.1;Name=WP_135370673.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9E93_RS20610;product=gamma-glutamyltransferase;protein_id=WP_135370673.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 91793 92209 . + . ID=gene-C9E93_RS20615;Name=C9E93_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20615;old_locus_tag=C9E93_21160 NZ_PYJV01000111.1 Protein Homology CDS 91793 92209 . + 0 ID=cds-WP_000826046.1;Parent=gene-C9E93_RS20615;Dbxref=GenBank:WP_000826046.1;Name=WP_000826046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9E93_RS20615;product=DUF2756 family protein;protein_id=WP_000826046.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 92222 92962 . - . ID=gene-C9E93_RS20620;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9E93_RS20620;old_locus_tag=C9E93_21165 NZ_PYJV01000111.1 Protein Homology CDS 92222 92962 . - 0 ID=cds-WP_000073548.1;Parent=gene-C9E93_RS20620;Dbxref=GenBank:WP_000073548.1;Name=WP_000073548.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9E93_RS20620;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073548.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 92959 94029 . - . ID=gene-C9E93_RS20625;Name=C9E93_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20625;old_locus_tag=C9E93_21170 NZ_PYJV01000111.1 Protein Homology CDS 92959 94029 . - 0 ID=cds-WP_000907836.1;Parent=gene-C9E93_RS20625;Dbxref=GenBank:WP_000907836.1;Name=WP_000907836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9E93_RS20625;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907836.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 94031 94876 . - . ID=gene-C9E93_RS20630;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9E93_RS20630;old_locus_tag=C9E93_21175 NZ_PYJV01000111.1 Protein Homology CDS 94031 94876 . - 0 ID=cds-WP_000572196.1;Parent=gene-C9E93_RS20630;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9E93_RS20630;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 94873 95760 . - . ID=gene-C9E93_RS20635;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9E93_RS20635;old_locus_tag=C9E93_21180 NZ_PYJV01000111.1 Protein Homology CDS 94873 95760 . - 0 ID=cds-WP_000099303.1;Parent=gene-C9E93_RS20635;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9E93_RS20635;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_PYJV01000111.1 RefSeq gene 95865 97181 . - . ID=gene-C9E93_RS20640;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9E93_RS20640;old_locus_tag=C9E93_21185 NZ_PYJV01000111.1 Protein Homology CDS 95865 97181 . - 0 ID=cds-WP_000624747.1;Parent=gene-C9E93_RS20640;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9E93_RS20640;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 ##sequence-region NZ_PYJV01000019.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000019.1 RefSeq region 1 345 . + . ID=NZ_PYJV01000019.1:1..345;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000019.1 RefSeq pseudogene 1 345 . - . ID=gene-C9E93_RS23650;Name=C9E93_RS23650;end_range=345,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23650;old_locus_tag=C9E93_02230;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000019.1 Protein Homology CDS 1 345 . - 1 ID=cds-C9E93_RS23650;Parent=gene-C9E93_RS23650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416999.1;locus_tag=C9E93_RS23650;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000039.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000039.1 RefSeq region 1 339 . + . ID=NZ_PYJV01000039.1:1..339;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000039.1 RefSeq gene 1 339 . + . ID=gene-C9E93_RS06190;Name=C9E93_RS06190;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06190;old_locus_tag=C9E93_06390;partial=true;start_range=.,1 NZ_PYJV01000039.1 Protein Homology CDS 1 339 . + 2 ID=cds-WP_217810204.1;Parent=gene-C9E93_RS06190;Dbxref=GenBank:WP_217810204.1;Name=WP_217810204.1;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272669.1;locus_tag=C9E93_RS06190;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_217810204.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000053.1 1 330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000053.1 RefSeq region 1 330 . + . ID=NZ_PYJV01000053.1:1..330;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000053.1 RefSeq gene 1 250 . - . ID=gene-C9E93_RS08175;Name=C9E93_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08175;old_locus_tag=C9E93_08405;partial=true;start_range=.,1 NZ_PYJV01000053.1 Protein Homology CDS 1 250 . - 0 ID=cds-WP_135370600.1;Parent=gene-C9E93_RS08175;Dbxref=GenBank:WP_135370600.1;Name=WP_135370600.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9E93_RS08175;partial=true;product=transposase;protein_id=WP_135370600.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000100.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000100.1 RefSeq region 1 320 . + . ID=NZ_PYJV01000100.1:1..320;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000100.1 RefSeq pseudogene 1 206 . + . ID=gene-C9E93_RS23780;Name=C9E93_RS23780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23780;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000100.1 GeneMarkS-2+ CDS 1 206 . + 2 ID=cds-C9E93_RS23780;Parent=gene-C9E93_RS23780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23780;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000070.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000070.1 RefSeq region 1 306 . + . ID=NZ_PYJV01000070.1:1..306;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000070.1 RefSeq gene 116 192 . + . ID=gene-C9E93_RS11410;Name=C9E93_RS11410;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS11410;old_locus_tag=C9E93_11695 NZ_PYJV01000070.1 tRNAscan-SE tRNA 116 192 . + . ID=rna-C9E93_RS11410;Parent=gene-C9E93_RS11410;anticodon=(pos:150..152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS11410;product=tRNA-Arg NZ_PYJV01000070.1 tRNAscan-SE exon 116 192 . + . ID=exon-C9E93_RS11410-1;Parent=rna-C9E93_RS11410;anticodon=(pos:150..152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS11410;product=tRNA-Arg ##sequence-region NZ_PYJV01000129.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000129.1 RefSeq region 1 293 . + . ID=NZ_PYJV01000129.1:1..293;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000129.1 RefSeq gene 127 202 . - . ID=gene-C9E93_RS23390;Name=C9E93_RS23390;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS23390;old_locus_tag=C9E93_24025 NZ_PYJV01000129.1 tRNAscan-SE tRNA 127 202 . - . ID=rna-C9E93_RS23390;Parent=gene-C9E93_RS23390;anticodon=(pos:complement(166..168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS23390;product=tRNA-Glu NZ_PYJV01000129.1 tRNAscan-SE exon 127 202 . - . ID=exon-C9E93_RS23390-1;Parent=rna-C9E93_RS23390;anticodon=(pos:complement(166..168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS23390;product=tRNA-Glu ##sequence-region NZ_PYJV01000080.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000080.1 RefSeq region 1 275 . + . ID=NZ_PYJV01000080.1:1..275;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000080.1 RefSeq gene 80 275 . - . ID=gene-C9E93_RS13960;Name=C9E93_RS13960;end_range=275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13960;old_locus_tag=C9E93_14315;partial=true NZ_PYJV01000080.1 Protein Homology CDS 80 275 . - 1 ID=cds-WP_217810215.1;Parent=gene-C9E93_RS13960;Dbxref=GenBank:WP_217810215.1;Name=WP_217810215.1;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;end_range=275,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9E93_RS13960;partial=true;product=heme exporter protein CcmB;protein_id=WP_217810215.1;transl_table=11 ##sequence-region NZ_PYJV01000001.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000001.1 RefSeq region 1 253 . + . ID=NZ_PYJV01000001.1:1..253;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000001.1 RefSeq gene 82 168 . + . ID=gene-C9E93_RS00005;Name=C9E93_RS00005;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00005;old_locus_tag=C9E93_00005 NZ_PYJV01000001.1 tRNAscan-SE tRNA 82 168 . + . ID=rna-C9E93_RS00005;Parent=gene-C9E93_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00005;product=tRNA-Leu NZ_PYJV01000001.1 tRNAscan-SE exon 82 168 . + . ID=exon-C9E93_RS00005-1;Parent=rna-C9E93_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00005;product=tRNA-Leu ##sequence-region NZ_PYJV01000016.1 1 96363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000016.1 RefSeq region 1 96363 . + . ID=NZ_PYJV01000016.1:1..96363;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000016.1 RefSeq gene 1 217 . + . ID=gene-C9E93_RS01385;Name=C9E93_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01385;old_locus_tag=C9E93_01455;partial=true;start_range=.,1 NZ_PYJV01000016.1 Protein Homology CDS 1 217 . + 1 ID=cds-WP_135370268.1;Parent=gene-C9E93_RS01385;Dbxref=GenBank:WP_135370268.1;Name=WP_135370268.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=C9E93_RS01385;partial=true;product=integrase core domain-containing protein;protein_id=WP_135370268.1;start_range=.,1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 384 1562 . - . ID=gene-C9E93_RS01390;Name=C9E93_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01390;old_locus_tag=C9E93_01460 NZ_PYJV01000016.1 Protein Homology CDS 384 1562 . - 0 ID=cds-WP_079953618.1;Parent=gene-C9E93_RS01390;Dbxref=GenBank:WP_079953618.1;Name=WP_079953618.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: protein motif:HMM:NF016800.6;locus_tag=C9E93_RS01390;product=O-antigen ligase family protein;protein_id=WP_079953618.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 1575 1781 . - . ID=gene-C9E93_RS01395;Name=C9E93_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01395;old_locus_tag=C9E93_01465 NZ_PYJV01000016.1 Protein Homology CDS 1575 1781 . - 0 ID=cds-WP_057935469.1;Parent=gene-C9E93_RS01395;Dbxref=GenBank:WP_057935469.1;Name=WP_057935469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015971056.1;locus_tag=C9E93_RS01395;product=hypothetical protein;protein_id=WP_057935469.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 1987 2346 . + . ID=gene-C9E93_RS01400;Name=C9E93_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01400;old_locus_tag=C9E93_01470 NZ_PYJV01000016.1 Protein Homology CDS 1987 2346 . + 0 ID=cds-WP_232472639.1;Parent=gene-C9E93_RS01400;Dbxref=GenBank:WP_232472639.1;Name=WP_232472639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275998.1;locus_tag=C9E93_RS01400;product=putative holin;protein_id=WP_232472639.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 2333 2641 . + . ID=gene-C9E93_RS01405;Name=C9E93_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01405;old_locus_tag=C9E93_01475 NZ_PYJV01000016.1 Protein Homology CDS 2333 2641 . + 0 ID=cds-WP_057935468.1;Parent=gene-C9E93_RS01405;Dbxref=GenBank:WP_057935468.1;Name=WP_057935468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146393.1;locus_tag=C9E93_RS01405;product=phage holin family protein;protein_id=WP_057935468.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 2676 3257 . + . ID=gene-C9E93_RS01410;Name=C9E93_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01410;old_locus_tag=C9E93_01480 NZ_PYJV01000016.1 Protein Homology CDS 2676 3257 . + 0 ID=cds-WP_232472666.1;Parent=gene-C9E93_RS01410;Dbxref=GenBank:WP_232472666.1;Name=WP_232472666.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847201.1;locus_tag=C9E93_RS01410;product=glycoside hydrolase family 19 protein;protein_id=WP_232472666.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 3254 3736 . + . ID=gene-C9E93_RS01415;Name=C9E93_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01415;old_locus_tag=C9E93_01485 NZ_PYJV01000016.1 Protein Homology CDS 3254 3736 . + 0 ID=cds-WP_057935467.1;Parent=gene-C9E93_RS01415;Dbxref=GenBank:WP_057935467.1;Name=WP_057935467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152707.1;locus_tag=C9E93_RS01415;product=DUF2514 domain-containing protein;protein_id=WP_057935467.1;transl_table=11 NZ_PYJV01000016.1 RefSeq pseudogene 3998 4314 . + . ID=gene-C9E93_RS01420;Name=C9E93_RS01420;end_range=4314,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS01420;old_locus_tag=C9E93_01490;partial=true;pseudo=true;start_range=.,3998 NZ_PYJV01000016.1 Protein Homology CDS 3998 4314 . + 0 ID=cds-C9E93_RS01420;Parent=gene-C9E93_RS01420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=4314,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=C9E93_RS01420;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,3998;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 4394 4723 . - . ID=gene-C9E93_RS01425;Name=C9E93_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01425;old_locus_tag=C9E93_01495 NZ_PYJV01000016.1 Protein Homology CDS 4394 4723 . - 0 ID=cds-WP_001619362.1;Parent=gene-C9E93_RS01425;Dbxref=GenBank:WP_001619362.1;Name=WP_001619362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9E93_RS01425;product=DUF1493 family protein;protein_id=WP_001619362.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 4708 5169 . - . ID=gene-C9E93_RS24050;Name=C9E93_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24050 NZ_PYJV01000016.1 Protein Homology CDS 4708 5169 . - 0 ID=cds-WP_369597813.1;Parent=gene-C9E93_RS24050;Dbxref=GenBank:WP_369597813.1;Name=WP_369597813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=C9E93_RS24050;product=STM2901 family protein;protein_id=WP_369597813.1;transl_table=11 NZ_PYJV01000016.1 RefSeq pseudogene 5309 5428 . + . ID=gene-C9E93_RS23815;Name=C9E93_RS23815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23815;partial=true;pseudo=true;start_range=.,5309 NZ_PYJV01000016.1 Protein Homology CDS 5309 5428 . + 0 ID=cds-C9E93_RS23815;Parent=gene-C9E93_RS23815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9E93_RS23815;partial=true;product=hypothetical protein;pseudo=true;start_range=.,5309;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 5506 5697 . - . ID=gene-C9E93_RS01435;Name=C9E93_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01435;old_locus_tag=C9E93_01505 NZ_PYJV01000016.1 Protein Homology CDS 5506 5697 . - 0 ID=cds-WP_000075924.1;Parent=gene-C9E93_RS01435;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9E93_RS01435;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 5876 6013 . + . ID=gene-C9E93_RS01440;Name=C9E93_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01440;old_locus_tag=C9E93_01510 NZ_PYJV01000016.1 Protein Homology CDS 5876 6013 . + 0 ID=cds-WP_001540598.1;Parent=gene-C9E93_RS01440;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9E93_RS01440;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 6110 8323 . + . ID=gene-C9E93_RS01445;Name=C9E93_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01445;old_locus_tag=C9E93_01515 NZ_PYJV01000016.1 Protein Homology CDS 6110 8323 . + 0 ID=cds-WP_000773647.1;Parent=gene-C9E93_RS01445;Dbxref=GenBank:WP_000773647.1;Name=WP_000773647.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9E93_RS01445;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773647.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 8359 9900 . - . ID=gene-C9E93_RS01450;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9E93_RS01450;old_locus_tag=C9E93_01520 NZ_PYJV01000016.1 Protein Homology CDS 8359 9900 . - 0 ID=cds-WP_001123330.1;Parent=gene-C9E93_RS01450;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9E93_RS01450;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 9905 11971 . - . ID=gene-C9E93_RS01455;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9E93_RS01455;old_locus_tag=C9E93_01525 NZ_PYJV01000016.1 Protein Homology CDS 9905 11971 . - 0 ID=cds-WP_000529555.1;Parent=gene-C9E93_RS01455;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9E93_RS01455;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 12160 12798 . - . ID=gene-C9E93_RS01460;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9E93_RS01460;old_locus_tag=C9E93_01530 NZ_PYJV01000016.1 Protein Homology CDS 12160 12798 . - 0 ID=cds-WP_001028589.1;Parent=gene-C9E93_RS01460;Dbxref=GenBank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9E93_RS01460;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 12798 13835 . - . ID=gene-C9E93_RS01465;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9E93_RS01465;old_locus_tag=C9E93_01535 NZ_PYJV01000016.1 Protein Homology CDS 12798 13835 . - 0 ID=cds-WP_000130475.1;Parent=gene-C9E93_RS01465;Dbxref=GenBank:WP_000130475.1;Name=WP_000130475.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9E93_RS01465;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130475.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 14248 14874 . + . ID=gene-C9E93_RS01470;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=C9E93_RS01470;old_locus_tag=C9E93_01540 NZ_PYJV01000016.1 Protein Homology CDS 14248 14874 . + 0 ID=cds-WP_000706208.1;Parent=gene-C9E93_RS01470;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9E93_RS01470;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 14962 16251 . + . ID=gene-C9E93_RS01475;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9E93_RS01475;old_locus_tag=C9E93_01545 NZ_PYJV01000016.1 Protein Homology CDS 14962 16251 . + 0 ID=cds-WP_000198339.1;Parent=gene-C9E93_RS01475;Dbxref=GenBank:WP_000198339.1;Name=WP_000198339.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=C9E93_RS01475;product=uracil permease;protein_id=WP_000198339.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 16346 17047 . + . ID=gene-C9E93_RS01480;Name=C9E93_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01480;old_locus_tag=C9E93_01550 NZ_PYJV01000016.1 Protein Homology CDS 16346 17047 . + 0 ID=cds-WP_061835882.1;Parent=gene-C9E93_RS01480;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9E93_RS01480;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 17074 17433 . - . ID=gene-C9E93_RS01485;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9E93_RS01485;old_locus_tag=C9E93_01555 NZ_PYJV01000016.1 Protein Homology CDS 17074 17433 . - 0 ID=cds-WP_000132650.1;Parent=gene-C9E93_RS01485;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9E93_RS01485;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 17473 18936 . - . ID=gene-C9E93_RS01490;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=C9E93_RS01490;old_locus_tag=C9E93_01560 NZ_PYJV01000016.1 Protein Homology CDS 17473 18936 . - 0 ID=cds-WP_000489630.1;Parent=gene-C9E93_RS01490;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9E93_RS01490;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 19144 20211 . + . ID=gene-C9E93_RS01495;Name=C9E93_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01495;old_locus_tag=C9E93_01565 NZ_PYJV01000016.1 Protein Homology CDS 19144 20211 . + 0 ID=cds-WP_000892057.1;Parent=gene-C9E93_RS01495;Dbxref=GenBank:WP_000892057.1;Name=WP_000892057.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9E93_RS01495;product=AI-2E family transporter;protein_id=WP_000892057.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 20488 21675 . + . ID=gene-C9E93_RS01500;Name=C9E93_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01500;old_locus_tag=C9E93_01570 NZ_PYJV01000016.1 Protein Homology CDS 20488 21675 . + 0 ID=cds-WP_001533732.1;Parent=gene-C9E93_RS01500;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9E93_RS01500;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 21743 23011 . + . ID=gene-C9E93_RS01505;Name=C9E93_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01505;old_locus_tag=C9E93_01575 NZ_PYJV01000016.1 Protein Homology CDS 21743 23011 . + 0 ID=cds-WP_135370459.1;Parent=gene-C9E93_RS01505;Dbxref=GenBank:WP_135370459.1;Name=WP_135370459.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9E93_RS01505;product=GntP family permease;protein_id=WP_135370459.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 23017 24156 . + . ID=gene-C9E93_RS01510;Name=C9E93_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01510;old_locus_tag=C9E93_01580 NZ_PYJV01000016.1 Protein Homology CDS 23017 24156 . + 0 ID=cds-WP_135370458.1;Parent=gene-C9E93_RS01510;Dbxref=GenBank:WP_135370458.1;Name=WP_135370458.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9E93_RS01510;product=glycerate kinase;protein_id=WP_135370458.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 24203 24673 . - . ID=gene-C9E93_RS01515;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9E93_RS01515;old_locus_tag=C9E93_01585 NZ_PYJV01000016.1 Protein Homology CDS 24203 24673 . - 0 ID=cds-WP_001068686.1;Parent=gene-C9E93_RS01515;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9E93_RS01515;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 24673 25245 . - . ID=gene-C9E93_RS01520;Name=C9E93_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01520;old_locus_tag=C9E93_01590 NZ_PYJV01000016.1 Protein Homology CDS 24673 25245 . - 0 ID=cds-WP_000189061.1;Parent=gene-C9E93_RS01520;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9E93_RS01520;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 25391 26269 . + . ID=gene-C9E93_RS01525;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9E93_RS01525;old_locus_tag=C9E93_01595 NZ_PYJV01000016.1 Protein Homology CDS 25391 26269 . + 0 ID=cds-WP_135370457.1;Parent=gene-C9E93_RS01525;Dbxref=GenBank:WP_135370457.1;Name=WP_135370457.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9E93_RS01525;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_135370457.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 26286 27320 . + . ID=gene-C9E93_RS01530;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9E93_RS01530;old_locus_tag=C9E93_01600 NZ_PYJV01000016.1 Protein Homology CDS 26286 27320 . + 0 ID=cds-WP_000331880.1;Parent=gene-C9E93_RS01530;Dbxref=GenBank:WP_000331880.1;Name=WP_000331880.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9E93_RS01530;product=outer membrane protein assembly factor BamC;protein_id=WP_000331880.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 27495 28208 . + . ID=gene-C9E93_RS01535;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=C9E93_RS01535;old_locus_tag=C9E93_01605 NZ_PYJV01000016.1 Protein Homology CDS 27495 28208 . + 0 ID=cds-WP_001171630.1;Parent=gene-C9E93_RS01535;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9E93_RS01535;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 28339 29202 . + . ID=gene-C9E93_RS01540;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=C9E93_RS01540;old_locus_tag=C9E93_01610 NZ_PYJV01000016.1 Protein Homology CDS 28339 29202 . + 0 ID=cds-WP_001267523.1;Parent=gene-C9E93_RS01540;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9E93_RS01540;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 29218 31236 . + . ID=gene-C9E93_RS01545;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9E93_RS01545;old_locus_tag=C9E93_01615 NZ_PYJV01000016.1 Protein Homology CDS 29218 31236 . + 0 ID=cds-WP_135400580.1;Parent=gene-C9E93_RS01545;Dbxref=GenBank:WP_135400580.1;Name=WP_135400580.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9E93_RS01545;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_135400580.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 31263 31463 . - . ID=gene-C9E93_RS01550;Name=C9E93_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01550;old_locus_tag=C9E93_01620 NZ_PYJV01000016.1 Protein Homology CDS 31263 31463 . - 0 ID=cds-WP_000383839.1;Parent=gene-C9E93_RS01550;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9E93_RS01550;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 31491 32618 . - . ID=gene-C9E93_RS01555;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9E93_RS01555;old_locus_tag=C9E93_01625 NZ_PYJV01000016.1 Protein Homology CDS 31491 32618 . - 0 ID=cds-WP_135370324.1;Parent=gene-C9E93_RS01555;Dbxref=GenBank:WP_135370324.1;Name=WP_135370324.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9E93_RS01555;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_135370324.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 32622 32978 . - . ID=gene-C9E93_RS01560;Name=C9E93_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01560;old_locus_tag=C9E93_01630 NZ_PYJV01000016.1 Protein Homology CDS 32622 32978 . - 0 ID=cds-WP_000631923.1;Parent=gene-C9E93_RS01560;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9E93_RS01560;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 33391 33450 . + . ID=gene-C9E93_RS01565;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9E93_RS01565;old_locus_tag=C9E93_01635 NZ_PYJV01000016.1 Protein Homology CDS 33391 33450 . + 0 ID=cds-WP_001386977.1;Parent=gene-C9E93_RS01565;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9E93_RS01565;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 33552 36665 . - . ID=gene-C9E93_RS01570;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=C9E93_RS01570;old_locus_tag=C9E93_01640 NZ_PYJV01000016.1 Protein Homology CDS 33552 36665 . - 0 ID=cds-WP_048348771.1;Parent=gene-C9E93_RS01570;Dbxref=GenBank:WP_048348771.1;Name=WP_048348771.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9E93_RS01570;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_048348771.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 36850 38550 . - . ID=gene-C9E93_RS01575;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=C9E93_RS01575;old_locus_tag=C9E93_01645 NZ_PYJV01000016.1 Protein Homology CDS 36850 38550 . - 0 ID=cds-WP_000216814.1;Parent=gene-C9E93_RS01575;Dbxref=GenBank:WP_000216814.1;Name=WP_000216814.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9E93_RS01575;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216814.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 38736 40697 . + . ID=gene-C9E93_RS01580;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=C9E93_RS01580;old_locus_tag=C9E93_01650 NZ_PYJV01000016.1 Protein Homology CDS 38736 40697 . + 0 ID=cds-WP_001078940.1;Parent=gene-C9E93_RS01580;Dbxref=GenBank:WP_001078940.1;Name=WP_001078940.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9E93_RS01580;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078940.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 41146 42444 . - . ID=gene-C9E93_RS01585;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9E93_RS01585;old_locus_tag=C9E93_01660 NZ_PYJV01000016.1 Protein Homology CDS 41146 42444 . - 0 ID=cds-WP_000673294.1;Parent=gene-C9E93_RS01585;Dbxref=GenBank:WP_000673294.1;Name=WP_000673294.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9E93_RS01585;product=penicillin binding protein PBP4B;protein_id=WP_000673294.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 42648 43223 . + . ID=gene-C9E93_RS01590;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9E93_RS01590;old_locus_tag=C9E93_01665 NZ_PYJV01000016.1 Protein Homology CDS 42648 43223 . + 0 ID=cds-WP_000084037.1;Parent=gene-C9E93_RS01590;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9E93_RS01590;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 43348 44391 . + . ID=gene-C9E93_RS01595;Name=C9E93_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01595;old_locus_tag=C9E93_01670 NZ_PYJV01000016.1 Protein Homology CDS 43348 44391 . + 0 ID=cds-WP_135370005.1;Parent=gene-C9E93_RS01595;Dbxref=GenBank:WP_135370005.1;Name=WP_135370005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9E93_RS01595;product=DUF1176 domain-containing protein;protein_id=WP_135370005.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 44519 44749 . + . ID=gene-C9E93_RS01600;Name=C9E93_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01600;old_locus_tag=C9E93_01675 NZ_PYJV01000016.1 Protein Homology CDS 44519 44749 . + 0 ID=cds-WP_000700635.1;Parent=gene-C9E93_RS01600;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9E93_RS01600;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 44812 46812 . - . ID=gene-C9E93_RS01605;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E93_RS01605;old_locus_tag=C9E93_01680 NZ_PYJV01000016.1 Protein Homology CDS 44812 46812 . - 0 ID=cds-WP_135370006.1;Parent=gene-C9E93_RS01605;Dbxref=GenBank:WP_135370006.1;Name=WP_135370006.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9E93_RS01605;product=transketolase;protein_id=WP_135370006.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 46832 47782 . - . ID=gene-C9E93_RS01610;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E93_RS01610;old_locus_tag=C9E93_01685 NZ_PYJV01000016.1 Protein Homology CDS 46832 47782 . - 0 ID=cds-WP_135370007.1;Parent=gene-C9E93_RS01610;Dbxref=GenBank:WP_135370007.1;Name=WP_135370007.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9E93_RS01610;product=transaldolase;protein_id=WP_135370007.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 48054 50333 . + . ID=gene-C9E93_RS01615;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9E93_RS01615;old_locus_tag=C9E93_01695 NZ_PYJV01000016.1 Protein Homology CDS 48054 50333 . + 0 ID=cds-WP_000344299.1;Parent=gene-C9E93_RS01615;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9E93_RS01615;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 50750 51085 . + . ID=gene-C9E93_RS01620;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9E93_RS01620;old_locus_tag=C9E93_01700 NZ_PYJV01000016.1 Protein Homology CDS 50750 51085 . + 0 ID=cds-WP_001031445.1;Parent=gene-C9E93_RS01620;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9E93_RS01620;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 51098 51577 . + . ID=gene-C9E93_RS01625;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9E93_RS01625;old_locus_tag=C9E93_01705 NZ_PYJV01000016.1 Protein Homology CDS 51098 51577 . + 0 ID=cds-WP_000820751.1;Parent=gene-C9E93_RS01625;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9E93_RS01625;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 51555 52244 . + . ID=gene-C9E93_RS01630;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9E93_RS01630;old_locus_tag=C9E93_01710 NZ_PYJV01000016.1 Protein Homology CDS 51555 52244 . + 0 ID=cds-WP_000733867.1;Parent=gene-C9E93_RS01630;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9E93_RS01630;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 52241 53044 . + . ID=gene-C9E93_RS01635;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9E93_RS01635;old_locus_tag=C9E93_01715 NZ_PYJV01000016.1 Protein Homology CDS 52241 53044 . + 0 ID=cds-WP_135370008.1;Parent=gene-C9E93_RS01635;Dbxref=GenBank:WP_135370008.1;Name=WP_135370008.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9E93_RS01635;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_135370008.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 53041 54057 . + . ID=gene-C9E93_RS01640;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E93_RS01640;old_locus_tag=C9E93_01720 NZ_PYJV01000016.1 Protein Homology CDS 53041 54057 . + 0 ID=cds-WP_000582927.1;Parent=gene-C9E93_RS01640;Dbxref=GenBank:WP_000582927.1;Name=WP_000582927.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9E93_RS01640;product=phosphate acetyltransferase;protein_id=WP_000582927.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 54098 54388 . + . ID=gene-C9E93_RS01645;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9E93_RS01645;old_locus_tag=C9E93_01725 NZ_PYJV01000016.1 Protein Homology CDS 54098 54388 . + 0 ID=cds-WP_000387716.1;Parent=gene-C9E93_RS01645;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9E93_RS01645;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 54501 54788 . + . ID=gene-C9E93_RS01650;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9E93_RS01650;old_locus_tag=C9E93_01730 NZ_PYJV01000016.1 Protein Homology CDS 54501 54788 . + 0 ID=cds-WP_001522340.1;Parent=gene-C9E93_RS01650;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9E93_RS01650;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 54800 56203 . + . ID=gene-C9E93_RS01655;Name=C9E93_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01655;old_locus_tag=C9E93_01735 NZ_PYJV01000016.1 Protein Homology CDS 54800 56203 . + 0 ID=cds-WP_001075640.1;Parent=gene-C9E93_RS01655;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9E93_RS01655;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 56214 57053 . + . ID=gene-C9E93_RS01660;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9E93_RS01660;old_locus_tag=C9E93_01740 NZ_PYJV01000016.1 Protein Homology CDS 56214 57053 . + 0 ID=cds-WP_023219835.1;Parent=gene-C9E93_RS01660;Dbxref=GenBank:WP_023219835.1;Name=WP_023219835.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9E93_RS01660;product=ethanolamine utilization protein EutJ;protein_id=WP_023219835.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 57043 58230 . + . ID=gene-C9E93_RS01665;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9E93_RS01665;old_locus_tag=C9E93_01745 NZ_PYJV01000016.1 Protein Homology CDS 57043 58230 . + 0 ID=cds-WP_001147505.1;Parent=gene-C9E93_RS01665;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9E93_RS01665;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 58350 59576 . + . ID=gene-C9E93_RS01670;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9E93_RS01670;old_locus_tag=C9E93_01750 NZ_PYJV01000016.1 Protein Homology CDS 58350 59576 . + 0 ID=cds-WP_000512359.1;Parent=gene-C9E93_RS01670;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9E93_RS01670;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 59573 60976 . + . ID=gene-C9E93_RS01675;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9E93_RS01675;old_locus_tag=C9E93_01755 NZ_PYJV01000016.1 Protein Homology CDS 59573 60976 . + 0 ID=cds-WP_001097522.1;Parent=gene-C9E93_RS01675;Dbxref=GenBank:WP_001097522.1;Name=WP_001097522.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9E93_RS01675;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097522.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 60988 62349 . + . ID=gene-C9E93_RS01680;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=C9E93_RS01680;old_locus_tag=C9E93_01760 NZ_PYJV01000016.1 Protein Homology CDS 60988 62349 . + 0 ID=cds-WP_000769990.1;Parent=gene-C9E93_RS01680;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9E93_RS01680;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 62368 63264 . + . ID=gene-C9E93_RS01685;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9E93_RS01685;old_locus_tag=C9E93_01765 NZ_PYJV01000016.1 Protein Homology CDS 62368 63264 . + 0 ID=cds-WP_000372354.1;Parent=gene-C9E93_RS01685;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9E93_RS01685;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 63274 63933 . + . ID=gene-C9E93_RS01690;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9E93_RS01690;old_locus_tag=C9E93_01770 NZ_PYJV01000016.1 Protein Homology CDS 63274 63933 . + 0 ID=cds-WP_135370009.1;Parent=gene-C9E93_RS01690;Dbxref=GenBank:WP_135370009.1;Name=WP_135370009.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9E93_RS01690;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_135370009.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 63946 64440 . + . ID=gene-C9E93_RS01695;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9E93_RS01695;old_locus_tag=C9E93_01775 NZ_PYJV01000016.1 Protein Homology CDS 63946 64440 . + 0 ID=cds-WP_023193825.1;Parent=gene-C9E93_RS01695;Dbxref=GenBank:WP_023193825.1;Name=WP_023193825.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9E93_RS01695;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_023193825.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 64488 65540 . + . ID=gene-C9E93_RS01700;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9E93_RS01700;old_locus_tag=C9E93_01780 NZ_PYJV01000016.1 Protein Homology CDS 64488 65540 . + 0 ID=cds-WP_000753665.1;Parent=gene-C9E93_RS01700;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9E93_RS01700;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 65719 66417 . + . ID=gene-C9E93_RS01705;Name=C9E93_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01705;old_locus_tag=C9E93_01785 NZ_PYJV01000016.1 Protein Homology CDS 65719 66417 . + 0 ID=cds-WP_001172085.1;Parent=gene-C9E93_RS01705;Dbxref=GenBank:WP_001172085.1;Name=WP_001172085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172085.1;locus_tag=C9E93_RS01705;product=hypothetical protein;protein_id=WP_001172085.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 66464 67363 . - . ID=gene-C9E93_RS01710;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9E93_RS01710;old_locus_tag=C9E93_01790 NZ_PYJV01000016.1 Protein Homology CDS 66464 67363 . - 0 ID=cds-WP_001630180.1;Parent=gene-C9E93_RS01710;Dbxref=GenBank:WP_001630180.1;Name=WP_001630180.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9E93_RS01710;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_001630180.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 67366 68235 . - . ID=gene-C9E93_RS01715;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9E93_RS01715;old_locus_tag=C9E93_01795 NZ_PYJV01000016.1 Protein Homology CDS 67366 68235 . - 0 ID=cds-WP_000102880.1;Parent=gene-C9E93_RS01715;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9E93_RS01715;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 68448 68873 . + . ID=gene-C9E93_RS01720;Name=C9E93_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01720;old_locus_tag=C9E93_01800 NZ_PYJV01000016.1 Protein Homology CDS 68448 68873 . + 0 ID=cds-WP_000406008.1;Parent=gene-C9E93_RS01720;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9E93_RS01720;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 68860 69309 . + . ID=gene-C9E93_RS01725;Name=C9E93_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01725;old_locus_tag=C9E93_01805 NZ_PYJV01000016.1 Protein Homology CDS 68860 69309 . + 0 ID=cds-WP_000842940.1;Parent=gene-C9E93_RS01725;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9E93_RS01725;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 69371 69946 . + . ID=gene-C9E93_RS01730;Name=C9E93_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01730;old_locus_tag=C9E93_01810 NZ_PYJV01000016.1 Protein Homology CDS 69371 69946 . + 0 ID=cds-WP_000838968.1;Parent=gene-C9E93_RS01730;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9E93_RS01730;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 70041 70940 . + . ID=gene-C9E93_RS01735;Name=C9E93_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01735;old_locus_tag=C9E93_01815 NZ_PYJV01000016.1 Protein Homology CDS 70041 70940 . + 0 ID=cds-WP_135370010.1;Parent=gene-C9E93_RS01735;Dbxref=GenBank:WP_135370010.1;Name=WP_135370010.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9E93_RS01735;product=Dyp-type peroxidase;protein_id=WP_135370010.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 71178 71969 . + . ID=gene-C9E93_RS01740;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9E93_RS01740;old_locus_tag=C9E93_01820 NZ_PYJV01000016.1 Protein Homology CDS 71178 71969 . + 0 ID=cds-WP_000517460.1;Parent=gene-C9E93_RS01740;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9E93_RS01740;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 72127 73143 . + . ID=gene-C9E93_RS01745;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9E93_RS01745;old_locus_tag=C9E93_01825 NZ_PYJV01000016.1 Protein Homology CDS 72127 73143 . + 0 ID=cds-WP_079928221.1;Parent=gene-C9E93_RS01745;Dbxref=GenBank:WP_079928221.1;Name=WP_079928221.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9E93_RS01745;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_079928221.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 73143 73976 . + . ID=gene-C9E93_RS01750;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=C9E93_RS01750;old_locus_tag=C9E93_01830 NZ_PYJV01000016.1 Protein Homology CDS 73143 73976 . + 0 ID=cds-WP_000881746.1;Parent=gene-C9E93_RS01750;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9E93_RS01750;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 73976 74851 . + . ID=gene-C9E93_RS01755;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9E93_RS01755;old_locus_tag=C9E93_01835 NZ_PYJV01000016.1 Protein Homology CDS 73976 74851 . + 0 ID=cds-WP_000852705.1;Parent=gene-C9E93_RS01755;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9E93_RS01755;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 74841 75938 . + . ID=gene-C9E93_RS01760;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9E93_RS01760;old_locus_tag=C9E93_01840 NZ_PYJV01000016.1 Protein Homology CDS 74841 75938 . + 0 ID=cds-WP_000021063.1;Parent=gene-C9E93_RS01760;Dbxref=GenBank:WP_000021063.1;Name=WP_000021063.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9E93_RS01760;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021063.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 76006 76917 . + . ID=gene-C9E93_RS01765;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9E93_RS01765;old_locus_tag=C9E93_01845 NZ_PYJV01000016.1 Protein Homology CDS 76006 76917 . + 0 ID=cds-WP_135370011.1;Parent=gene-C9E93_RS01765;Dbxref=GenBank:WP_135370011.1;Name=WP_135370011.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9E93_RS01765;product=cysteine synthase CysM;protein_id=WP_135370011.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 77048 77587 . - . ID=gene-C9E93_RS01775;Name=C9E93_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01775;old_locus_tag=C9E93_01855 NZ_PYJV01000016.1 Protein Homology CDS 77048 77587 . - 0 ID=cds-WP_135370012.1;Parent=gene-C9E93_RS01775;Dbxref=GenBank:WP_135370012.1;Name=WP_135370012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9E93_RS01775;product=transglycosylase domain-containing protein;protein_id=WP_135370012.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 77600 77980 . - . ID=gene-C9E93_RS01780;Name=C9E93_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01780;old_locus_tag=C9E93_01860 NZ_PYJV01000016.1 Protein Homology CDS 77600 77980 . - 0 ID=cds-WP_000710730.1;Parent=gene-C9E93_RS01780;Dbxref=GenBank:WP_000710730.1;Name=WP_000710730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9E93_RS01780;product=YfeK family protein;protein_id=WP_000710730.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 78039 78758 . - . ID=gene-C9E93_RS01785;Name=C9E93_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01785;old_locus_tag=C9E93_01865 NZ_PYJV01000016.1 Protein Homology CDS 78039 78758 . - 0 ID=cds-WP_135370013.1;Parent=gene-C9E93_RS01785;Dbxref=GenBank:WP_135370013.1;Name=WP_135370013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9E93_RS01785;product=type 1 glutamine amidotransferase;protein_id=WP_135370013.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 78773 80065 . - . ID=gene-C9E93_RS01790;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9E93_RS01790;old_locus_tag=C9E93_01870 NZ_PYJV01000016.1 Protein Homology CDS 78773 80065 . - 0 ID=cds-WP_079845629.1;Parent=gene-C9E93_RS01790;Dbxref=GenBank:WP_079845629.1;Name=WP_079845629.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9E93_RS01790;product=MocR-like B6 salvage transcription factor PtsJ;protein_id=WP_079845629.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 80148 81014 . + . ID=gene-C9E93_RS01795;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9E93_RS01795;old_locus_tag=C9E93_01875 NZ_PYJV01000016.1 Protein Homology CDS 80148 81014 . + 0 ID=cds-WP_000529613.1;Parent=gene-C9E93_RS01795;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9E93_RS01795;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 81011 81250 . + . ID=gene-C9E93_RS01800;Name=C9E93_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01800;old_locus_tag=C9E93_01880 NZ_PYJV01000016.1 Protein Homology CDS 81011 81250 . + 0 ID=cds-WP_000844541.1;Parent=gene-C9E93_RS01800;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9E93_RS01800;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 81413 81922 . - . ID=gene-C9E93_RS01805;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9E93_RS01805;old_locus_tag=C9E93_01885 NZ_PYJV01000016.1 Protein Homology CDS 81413 81922 . - 0 ID=cds-WP_000522253.1;Parent=gene-C9E93_RS01805;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9E93_RS01805;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 81963 83690 . - . ID=gene-C9E93_RS01810;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9E93_RS01810;old_locus_tag=C9E93_01890 NZ_PYJV01000016.1 Protein Homology CDS 81963 83690 . - 0 ID=cds-WP_000623114.1;Parent=gene-C9E93_RS01810;Dbxref=GenBank:WP_000623114.1;Name=WP_000623114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=C9E93_RS01810;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623114.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 83739 83996 . - . ID=gene-C9E93_RS01815;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9E93_RS01815;old_locus_tag=C9E93_01895 NZ_PYJV01000016.1 Protein Homology CDS 83739 83996 . - 0 ID=cds-WP_000487600.1;Parent=gene-C9E93_RS01815;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9E93_RS01815;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 84380 85351 . - . ID=gene-C9E93_RS01820;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9E93_RS01820;old_locus_tag=C9E93_01900 NZ_PYJV01000016.1 Protein Homology CDS 84380 85351 . - 0 ID=cds-WP_000036904.1;Parent=gene-C9E93_RS01820;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9E93_RS01820;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 85515 86276 . - . ID=gene-C9E93_RS01825;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9E93_RS01825;old_locus_tag=C9E93_01905 NZ_PYJV01000016.1 Protein Homology CDS 85515 86276 . - 0 ID=cds-WP_000255008.1;Parent=gene-C9E93_RS01825;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9E93_RS01825;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 86508 87494 . + . ID=gene-C9E93_RS01830;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9E93_RS01830;old_locus_tag=C9E93_01910 NZ_PYJV01000016.1 Protein Homology CDS 86508 87494 . + 0 ID=cds-WP_000983126.1;Parent=gene-C9E93_RS01830;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9E93_RS01830;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 87566 89581 . + . ID=gene-C9E93_RS01835;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9E93_RS01835;old_locus_tag=C9E93_01915 NZ_PYJV01000016.1 Protein Homology CDS 87566 89581 . + 0 ID=cds-WP_017465500.1;Parent=gene-C9E93_RS01835;Dbxref=GenBank:WP_017465500.1;Name=WP_017465500.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9E93_RS01835;product=NAD-dependent DNA ligase LigA;protein_id=WP_017465500.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 89583 89801 . + . ID=gene-C9E93_RS01840;Name=C9E93_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01840;old_locus_tag=C9E93_01920 NZ_PYJV01000016.1 Protein Homology CDS 89583 89801 . + 0 ID=cds-WP_001519708.1;Parent=gene-C9E93_RS01840;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9E93_RS01840;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 89798 90796 . - . ID=gene-C9E93_RS01845;Name=C9E93_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01845;old_locus_tag=C9E93_01925 NZ_PYJV01000016.1 Protein Homology CDS 89798 90796 . - 0 ID=cds-WP_000765569.1;Parent=gene-C9E93_RS01845;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9E93_RS01845;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 90886 91812 . + . ID=gene-C9E93_RS01850;Name=C9E93_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01850;old_locus_tag=C9E93_01930 NZ_PYJV01000016.1 Protein Homology CDS 90886 91812 . + 0 ID=cds-WP_031605640.1;Parent=gene-C9E93_RS01850;Dbxref=GenBank:WP_031605640.1;Name=WP_031605640.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9E93_RS01850;product=LysR family transcriptional regulator;protein_id=WP_031605640.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 91874 92635 . - . ID=gene-C9E93_RS01855;Name=C9E93_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01855;old_locus_tag=C9E93_01935 NZ_PYJV01000016.1 Protein Homology CDS 91874 92635 . - 0 ID=cds-WP_000722926.1;Parent=gene-C9E93_RS01855;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9E93_RS01855;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 92891 93724 . + . ID=gene-C9E93_RS01860;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9E93_RS01860;old_locus_tag=C9E93_01940 NZ_PYJV01000016.1 Protein Homology CDS 92891 93724 . + 0 ID=cds-WP_023181788.1;Parent=gene-C9E93_RS01860;Dbxref=GenBank:WP_023181788.1;Name=WP_023181788.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9E93_RS01860;product=xanthosine phosphorylase;protein_id=WP_023181788.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 93779 95035 . + . ID=gene-C9E93_RS01865;Name=C9E93_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01865;old_locus_tag=C9E93_01945 NZ_PYJV01000016.1 Protein Homology CDS 93779 95035 . + 0 ID=cds-WP_000513241.1;Parent=gene-C9E93_RS01865;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9E93_RS01865;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 95094 95252 . + . ID=gene-C9E93_RS01870;Name=C9E93_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01870;old_locus_tag=C9E93_01950 NZ_PYJV01000016.1 Protein Homology CDS 95094 95252 . + 0 ID=cds-WP_000658727.1;Parent=gene-C9E93_RS01870;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9E93_RS01870;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_PYJV01000016.1 RefSeq gene 95304 96188 . + . ID=gene-C9E93_RS01875;Name=C9E93_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01875;old_locus_tag=C9E93_01955 NZ_PYJV01000016.1 Protein Homology CDS 95304 96188 . + 0 ID=cds-WP_000438892.1;Parent=gene-C9E93_RS01875;Dbxref=GenBank:WP_000438892.1;Name=WP_000438892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9E93_RS01875;product=LysR family transcriptional regulator;protein_id=WP_000438892.1;transl_table=11 ##sequence-region NZ_PYJV01000065.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000065.1 RefSeq region 1 244 . + . ID=NZ_PYJV01000065.1:1..244;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica ##sequence-region NZ_PYJV01000005.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000005.1 RefSeq region 1 232 . + . ID=NZ_PYJV01000005.1:1..232;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000005.1 RefSeq gene 62 137 . + . ID=gene-C9E93_RS00180;Name=C9E93_RS00180;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00180;old_locus_tag=C9E93_00200 NZ_PYJV01000005.1 tRNAscan-SE tRNA 62 137 . + . ID=rna-C9E93_RS00180;Parent=gene-C9E93_RS00180;anticodon=(pos:95..97);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00180;product=tRNA-Thr NZ_PYJV01000005.1 tRNAscan-SE exon 62 137 . + . ID=exon-C9E93_RS00180-1;Parent=rna-C9E93_RS00180;anticodon=(pos:95..97);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00180;product=tRNA-Thr ##sequence-region NZ_PYJV01000013.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000013.1 RefSeq region 1 224 . + . ID=NZ_PYJV01000013.1:1..224;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica ##sequence-region NZ_PYJV01000087.1 1 223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000087.1 RefSeq region 1 223 . + . ID=NZ_PYJV01000087.1:1..223;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000087.1 RefSeq gene 1 223 . + . ID=gene-C9E93_RS15565;Name=C9E93_RS15565;end_range=223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15565;old_locus_tag=C9E93_15975;partial=true;start_range=.,1 NZ_PYJV01000087.1 Protein Homology CDS 1 223 . + 0 ID=cds-WP_135400624.1;Parent=gene-C9E93_RS15565;Dbxref=GenBank:WP_135400624.1;Name=WP_135400624.1;end_range=223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9E93_RS15565;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_135400624.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000003.1 1 214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000003.1 RefSeq region 1 214 . + . ID=NZ_PYJV01000003.1:1..214;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000003.1 RefSeq pseudogene 1 214 . - . ID=gene-C9E93_RS00015;Name=C9E93_RS00015;end_range=214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00015;old_locus_tag=C9E93_00015;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000003.1 Protein Homology CDS 1 214 . - 0 ID=cds-C9E93_RS00015;Parent=gene-C9E93_RS00015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836034.1;locus_tag=C9E93_RS00015;partial=true;product=electron transport complex subunit RsxC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJV01000120.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000120.1 RefSeq region 1 203 . + . ID=NZ_PYJV01000120.1:1..203;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica ##sequence-region NZ_PYJV01000029.1 1 96074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000029.1 RefSeq region 1 96074 . + . ID=NZ_PYJV01000029.1:1..96074;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000029.1 RefSeq gene 81 455 . - . ID=gene-C9E93_RS04270;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9E93_RS04270;old_locus_tag=C9E93_04430 NZ_PYJV01000029.1 cmsearch RNase_P_RNA 81 455 . - . ID=rna-C9E93_RS04270;Parent=gene-C9E93_RS04270;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS04270;product=RNase P RNA component class A NZ_PYJV01000029.1 cmsearch exon 81 455 . - . ID=exon-C9E93_RS04270-1;Parent=rna-C9E93_RS04270;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS04270;product=RNase P RNA component class A NZ_PYJV01000029.1 RefSeq gene 488 1633 . - . ID=gene-C9E93_RS04275;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9E93_RS04275;old_locus_tag=C9E93_04435 NZ_PYJV01000029.1 Protein Homology CDS 488 1633 . - 0 ID=cds-WP_001630908.1;Parent=gene-C9E93_RS04275;Dbxref=GenBank:WP_001630908.1;Name=WP_001630908.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9E93_RS04275;product=glycerate 2-kinase;protein_id=WP_001630908.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 1731 2621 . - . ID=gene-C9E93_RS04280;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9E93_RS04280;old_locus_tag=C9E93_04440 NZ_PYJV01000029.1 Protein Homology CDS 1731 2621 . - 0 ID=cds-WP_135370433.1;Parent=gene-C9E93_RS04280;Dbxref=GenBank:WP_135370433.1;Name=WP_135370433.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9E93_RS04280;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_135370433.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 2647 3417 . - . ID=gene-C9E93_RS04285;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9E93_RS04285;old_locus_tag=C9E93_04445 NZ_PYJV01000029.1 Protein Homology CDS 2647 3417 . - 0 ID=cds-WP_001057715.1;Parent=gene-C9E93_RS04285;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9E93_RS04285;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 3947 5518 . + . ID=gene-C9E93_RS04290;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9E93_RS04290;old_locus_tag=C9E93_04450 NZ_PYJV01000029.1 Protein Homology CDS 3947 5518 . + 0 ID=cds-WP_079965361.1;Parent=gene-C9E93_RS04290;Dbxref=GenBank:WP_079965361.1;Name=WP_079965361.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9E93_RS04290;product=galactarate dehydratase;protein_id=WP_079965361.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 5778 6632 . + . ID=gene-C9E93_RS04295;Name=C9E93_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04295;old_locus_tag=C9E93_04455 NZ_PYJV01000029.1 Protein Homology CDS 5778 6632 . + 0 ID=cds-WP_000469979.1;Parent=gene-C9E93_RS04295;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9E93_RS04295;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 6752 8023 . + . ID=gene-C9E93_RS04300;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=C9E93_RS04300;old_locus_tag=C9E93_04460 NZ_PYJV01000029.1 Protein Homology CDS 6752 8023 . + 0 ID=cds-WP_076727237.1;Parent=gene-C9E93_RS04300;Dbxref=GenBank:WP_076727237.1;Name=WP_076727237.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9E93_RS04300;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_076727237.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 8038 8502 . + . ID=gene-C9E93_RS04305;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E93_RS04305;old_locus_tag=C9E93_04465 NZ_PYJV01000029.1 Protein Homology CDS 8038 8502 . + 0 ID=cds-WP_000080445.1;Parent=gene-C9E93_RS04305;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9E93_RS04305;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 8533 8817 . + . ID=gene-C9E93_RS04310;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9E93_RS04310;old_locus_tag=C9E93_04470 NZ_PYJV01000029.1 Protein Homology CDS 8533 8817 . + 0 ID=cds-WP_000824293.1;Parent=gene-C9E93_RS04310;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9E93_RS04310;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 8821 10194 . + . ID=gene-C9E93_RS04315;Name=C9E93_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04315;old_locus_tag=C9E93_04475 NZ_PYJV01000029.1 Protein Homology CDS 8821 10194 . + 0 ID=cds-WP_000490601.1;Parent=gene-C9E93_RS04315;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9E93_RS04315;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 10238 11281 . + . ID=gene-C9E93_RS04320;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=C9E93_RS04320;old_locus_tag=C9E93_04480 NZ_PYJV01000029.1 Protein Homology CDS 10238 11281 . + 0 ID=cds-WP_000844187.1;Parent=gene-C9E93_RS04320;Dbxref=GenBank:WP_000844187.1;Name=WP_000844187.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9E93_RS04320;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844187.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 11392 12165 . + . ID=gene-C9E93_RS04325;Name=C9E93_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04325;old_locus_tag=C9E93_04485 NZ_PYJV01000029.1 Protein Homology CDS 11392 12165 . + 0 ID=cds-WP_001083899.1;Parent=gene-C9E93_RS04325;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9E93_RS04325;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 12323 13186 . - . ID=gene-C9E93_RS04330;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9E93_RS04330;old_locus_tag=C9E93_04490 NZ_PYJV01000029.1 Protein Homology CDS 12323 13186 . - 0 ID=cds-WP_000812295.1;Parent=gene-C9E93_RS04330;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9E93_RS04330;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 13250 15292 . + . ID=gene-C9E93_RS04335;Name=C9E93_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04335;old_locus_tag=C9E93_04495 NZ_PYJV01000029.1 Protein Homology CDS 13250 15292 . + 0 ID=cds-WP_135369996.1;Parent=gene-C9E93_RS04335;Dbxref=GenBank:WP_135369996.1;Name=WP_135369996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9E93_RS04335;product=penicillin-binding protein activator;protein_id=WP_135369996.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 15250 15645 . + . ID=gene-C9E93_RS04340;Name=C9E93_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04340;old_locus_tag=C9E93_04500 NZ_PYJV01000029.1 Protein Homology CDS 15250 15645 . + 0 ID=cds-WP_023994019.1;Parent=gene-C9E93_RS04340;Dbxref=GenBank:WP_023994019.1;Name=WP_023994019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9E93_RS04340;product=YraN family protein;protein_id=WP_023994019.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 15667 16257 . + . ID=gene-C9E93_RS04345;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9E93_RS04345;old_locus_tag=C9E93_04505 NZ_PYJV01000029.1 Protein Homology CDS 15667 16257 . + 0 ID=cds-WP_000893481.1;Parent=gene-C9E93_RS04345;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9E93_RS04345;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 16267 16842 . + . ID=gene-C9E93_RS04350;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9E93_RS04350;old_locus_tag=C9E93_04510 NZ_PYJV01000029.1 Protein Homology CDS 16267 16842 . + 0 ID=cds-WP_000643280.1;Parent=gene-C9E93_RS04350;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9E93_RS04350;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 16909 17544 . - . ID=gene-C9E93_RS04355;Name=C9E93_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04355;old_locus_tag=C9E93_04515 NZ_PYJV01000029.1 Protein Homology CDS 16909 17544 . - 0 ID=cds-WP_001532495.1;Parent=gene-C9E93_RS04355;Dbxref=GenBank:WP_001532495.1;Name=WP_001532495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9E93_RS04355;product=NAD(P)H-binding protein;protein_id=WP_001532495.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 17675 18193 . + . ID=gene-C9E93_RS04360;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=C9E93_RS04360;old_locus_tag=C9E93_04520 NZ_PYJV01000029.1 Protein Homology CDS 17675 18193 . + 0 ID=cds-WP_000037599.1;Parent=gene-C9E93_RS04360;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9E93_RS04360;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 18173 18616 . - . ID=gene-C9E93_RS04365;Name=C9E93_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04365;old_locus_tag=C9E93_04525 NZ_PYJV01000029.1 Protein Homology CDS 18173 18616 . - 0 ID=cds-WP_000380404.1;Parent=gene-C9E93_RS04365;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9E93_RS04365;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 18654 18971 . + . ID=gene-C9E93_RS04370;Name=C9E93_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04370;old_locus_tag=C9E93_04530 NZ_PYJV01000029.1 Protein Homology CDS 18654 18971 . + 0 ID=cds-WP_000928379.1;Parent=gene-C9E93_RS04370;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9E93_RS04370;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 18958 19461 . - . ID=gene-C9E93_RS04375;Name=C9E93_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04375;old_locus_tag=C9E93_04535 NZ_PYJV01000029.1 Protein Homology CDS 18958 19461 . - 0 ID=cds-WP_000908562.1;Parent=gene-C9E93_RS04375;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9E93_RS04375;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 19455 19979 . - . ID=gene-C9E93_RS04380;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=C9E93_RS04380;old_locus_tag=C9E93_04540 NZ_PYJV01000029.1 Protein Homology CDS 19455 19979 . - 0 ID=cds-WP_000884721.1;Parent=gene-C9E93_RS04380;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9E93_RS04380;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 20196 21191 . + . ID=gene-C9E93_RS04385;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=C9E93_RS04385;old_locus_tag=C9E93_04545 NZ_PYJV01000029.1 Protein Homology CDS 20196 21191 . + 0 ID=cds-WP_000421309.1;Parent=gene-C9E93_RS04385;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9E93_RS04385;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 21200 22078 . + . ID=gene-C9E93_RS04390;Name=C9E93_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04390;old_locus_tag=C9E93_04550 NZ_PYJV01000029.1 Protein Homology CDS 21200 22078 . + 0 ID=cds-WP_000877721.1;Parent=gene-C9E93_RS04390;Dbxref=GenBank:WP_000877721.1;Name=WP_000877721.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=C9E93_RS04390;product=U32 family peptidase;protein_id=WP_000877721.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 22256 23263 . + . ID=gene-C9E93_RS04400;Name=C9E93_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04400;old_locus_tag=C9E93_04560 NZ_PYJV01000029.1 Protein Homology CDS 22256 23263 . + 0 ID=cds-WP_135369998.1;Parent=gene-C9E93_RS04400;Dbxref=GenBank:WP_135369998.1;Name=WP_135369998.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9E93_RS04400;product=luciferase-like monooxygenase;protein_id=WP_135369998.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 23354 24598 . - . ID=gene-C9E93_RS04405;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9E93_RS04405;old_locus_tag=C9E93_04565 NZ_PYJV01000029.1 Protein Homology CDS 23354 24598 . - 0 ID=cds-WP_135369999.1;Parent=gene-C9E93_RS04405;Dbxref=GenBank:WP_135369999.1;Name=WP_135369999.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9E93_RS04405;product=tryptophan permease;protein_id=WP_135369999.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 24752 26641 . - . ID=gene-C9E93_RS04410;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9E93_RS04410;old_locus_tag=C9E93_04570 NZ_PYJV01000029.1 Protein Homology CDS 24752 26641 . - 0 ID=cds-WP_000807244.1;Parent=gene-C9E93_RS04410;Dbxref=GenBank:WP_000807244.1;Name=WP_000807244.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9E93_RS04410;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807244.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 26634 26714 . - . ID=gene-C9E93_RS04415;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9E93_RS04415 NZ_PYJV01000029.1 Protein Homology CDS 26634 26714 . - 0 ID=cds-WP_010723222.1;Parent=gene-C9E93_RS04415;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9E93_RS04415;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 26820 27704 . - . ID=gene-C9E93_RS04420;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9E93_RS04420;old_locus_tag=C9E93_04575 NZ_PYJV01000029.1 Protein Homology CDS 26820 27704 . - 0 ID=cds-WP_000802069.1;Parent=gene-C9E93_RS04420;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9E93_RS04420;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 27814 29949 . - . ID=gene-C9E93_RS04425;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9E93_RS04425;old_locus_tag=C9E93_04580 NZ_PYJV01000029.1 Protein Homology CDS 27814 29949 . - 0 ID=cds-WP_023187335.1;Parent=gene-C9E93_RS04425;Dbxref=GenBank:WP_023187335.1;Name=WP_023187335.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9E93_RS04425;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_023187335.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 30191 30460 . - . ID=gene-C9E93_RS04430;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9E93_RS04430;old_locus_tag=C9E93_04585 NZ_PYJV01000029.1 Protein Homology CDS 30191 30460 . - 0 ID=cds-WP_000059465.1;Parent=gene-C9E93_RS04430;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9E93_RS04430;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 30611 31555 . - . ID=gene-C9E93_RS04435;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9E93_RS04435;old_locus_tag=C9E93_04590 NZ_PYJV01000029.1 Protein Homology CDS 30611 31555 . - 0 ID=cds-WP_135370000.1;Parent=gene-C9E93_RS04435;Dbxref=GenBank:WP_135370000.1;Name=WP_135370000.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9E93_RS04435;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_135370000.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 31555 31956 . - . ID=gene-C9E93_RS04440;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9E93_RS04440;old_locus_tag=C9E93_04595 NZ_PYJV01000029.1 Protein Homology CDS 31555 31956 . - 0 ID=cds-WP_001040199.1;Parent=gene-C9E93_RS04440;Dbxref=GenBank:WP_001040199.1;Name=WP_001040199.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9E93_RS04440;product=30S ribosome-binding factor RbfA;protein_id=WP_001040199.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 32177 34855 . - . ID=gene-C9E93_RS04445;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9E93_RS04445;old_locus_tag=C9E93_04600 NZ_PYJV01000029.1 Protein Homology CDS 32177 34855 . - 0 ID=cds-WP_000133064.1;Parent=gene-C9E93_RS04445;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9E93_RS04445;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 34880 36382 . - . ID=gene-C9E93_RS04450;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9E93_RS04450;old_locus_tag=C9E93_04605 NZ_PYJV01000029.1 Protein Homology CDS 34880 36382 . - 0 ID=cds-WP_001031038.1;Parent=gene-C9E93_RS04450;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9E93_RS04450;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 36410 36862 . - . ID=gene-C9E93_RS04455;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9E93_RS04455;old_locus_tag=C9E93_04610 NZ_PYJV01000029.1 Protein Homology CDS 36410 36862 . - 0 ID=cds-WP_000105461.1;Parent=gene-C9E93_RS04455;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9E93_RS04455;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 37070 37146 . - . ID=gene-C9E93_RS04460;Name=C9E93_RS04460;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS04460;old_locus_tag=C9E93_04615 NZ_PYJV01000029.1 tRNAscan-SE tRNA 37070 37146 . - . ID=rna-C9E93_RS04460;Parent=gene-C9E93_RS04460;anticodon=(pos:complement(37110..37112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS04460;product=tRNA-Met NZ_PYJV01000029.1 tRNAscan-SE exon 37070 37146 . - . ID=exon-C9E93_RS04460-1;Parent=rna-C9E93_RS04460;anticodon=(pos:complement(37110..37112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS04460;product=tRNA-Met NZ_PYJV01000029.1 RefSeq gene 37490 38833 . + . ID=gene-C9E93_RS04465;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9E93_RS04465;old_locus_tag=C9E93_04620 NZ_PYJV01000029.1 Protein Homology CDS 37490 38833 . + 0 ID=cds-WP_167851635.1;Parent=gene-C9E93_RS04465;Dbxref=GenBank:WP_167851635.1;Name=WP_167851635.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708973.1;locus_tag=C9E93_RS04465;product=argininosuccinate synthase;protein_id=WP_167851635.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 39032 39118 . - . ID=gene-C9E93_RS04470;Name=C9E93_RS04470;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS04470;old_locus_tag=C9E93_04625 NZ_PYJV01000029.1 tRNAscan-SE tRNA 39032 39118 . - . ID=rna-C9E93_RS04470;Parent=gene-C9E93_RS04470;anticodon=(pos:complement(39082..39084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS04470;product=tRNA-Leu NZ_PYJV01000029.1 tRNAscan-SE exon 39032 39118 . - . ID=exon-C9E93_RS04470-1;Parent=rna-C9E93_RS04470;anticodon=(pos:complement(39082..39084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS04470;product=tRNA-Leu NZ_PYJV01000029.1 RefSeq gene 39132 39464 . - . ID=gene-C9E93_RS04475;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9E93_RS04475;old_locus_tag=C9E93_04630 NZ_PYJV01000029.1 Protein Homology CDS 39132 39464 . - 0 ID=cds-WP_000272680.1;Parent=gene-C9E93_RS04475;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9E93_RS04475;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 39687 41024 . - . ID=gene-C9E93_RS04480;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9E93_RS04480;old_locus_tag=C9E93_04635 NZ_PYJV01000029.1 Protein Homology CDS 39687 41024 . - 0 ID=cds-WP_000071169.1;Parent=gene-C9E93_RS04480;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9E93_RS04480;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 41017 41865 . - . ID=gene-C9E93_RS04485;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9E93_RS04485;old_locus_tag=C9E93_04640 NZ_PYJV01000029.1 Protein Homology CDS 41017 41865 . - 0 ID=cds-WP_000764711.1;Parent=gene-C9E93_RS04485;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9E93_RS04485;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 41970 43904 . - . ID=gene-C9E93_RS04490;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9E93_RS04490;old_locus_tag=C9E93_04645 NZ_PYJV01000029.1 Protein Homology CDS 41970 43904 . - 0 ID=cds-WP_001107481.1;Parent=gene-C9E93_RS04490;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9E93_RS04490;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 44008 44634 . - . ID=gene-C9E93_RS04495;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9E93_RS04495;old_locus_tag=C9E93_04655 NZ_PYJV01000029.1 Protein Homology CDS 44008 44634 . - 0 ID=cds-WP_000145974.1;Parent=gene-C9E93_RS04495;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9E93_RS04495;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 44761 45054 . + . ID=gene-C9E93_RS04500;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9E93_RS04500;old_locus_tag=C9E93_04660 NZ_PYJV01000029.1 Protein Homology CDS 44761 45054 . + 0 ID=cds-WP_001592995.1;Parent=gene-C9E93_RS04500;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9E93_RS04500;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 45210 45686 . - . ID=gene-C9E93_RS04505;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9E93_RS04505;old_locus_tag=C9E93_04665 NZ_PYJV01000029.1 Protein Homology CDS 45210 45686 . - 0 ID=cds-WP_135370002.1;Parent=gene-C9E93_RS04505;Dbxref=GenBank:WP_135370002.1;Name=WP_135370002.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9E93_RS04505;product=transcription elongation factor GreA;protein_id=WP_135370002.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 45934 47367 . + . ID=gene-C9E93_RS04510;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9E93_RS04510;old_locus_tag=C9E93_04670 NZ_PYJV01000029.1 Protein Homology CDS 45934 47367 . + 0 ID=cds-WP_001212681.1;Parent=gene-C9E93_RS04510;Dbxref=GenBank:WP_001212681.1;Name=WP_001212681.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9E93_RS04510;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212681.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 47498 48670 . - . ID=gene-C9E93_RS04515;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=C9E93_RS04515;old_locus_tag=C9E93_04675 NZ_PYJV01000029.1 Protein Homology CDS 47498 48670 . - 0 ID=cds-WP_000673556.1;Parent=gene-C9E93_RS04515;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9E93_RS04515;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 48686 49651 . - . ID=gene-C9E93_RS04520;Name=C9E93_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04520;old_locus_tag=C9E93_04680 NZ_PYJV01000029.1 Protein Homology CDS 48686 49651 . - 0 ID=cds-WP_000813052.1;Parent=gene-C9E93_RS04520;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9E93_RS04520;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 49781 50038 . - . ID=gene-C9E93_RS04525;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9E93_RS04525;old_locus_tag=C9E93_04685 NZ_PYJV01000029.1 Protein Homology CDS 49781 50038 . - 0 ID=cds-WP_000940593.1;Parent=gene-C9E93_RS04525;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9E93_RS04525;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 50058 50369 . - . ID=gene-C9E93_RS04530;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9E93_RS04530;old_locus_tag=C9E93_04690 NZ_PYJV01000029.1 Protein Homology CDS 50058 50369 . - 0 ID=cds-WP_000271396.1;Parent=gene-C9E93_RS04530;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9E93_RS04530;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 50627 51598 . + . ID=gene-C9E93_RS04535;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9E93_RS04535;old_locus_tag=C9E93_04695 NZ_PYJV01000029.1 Protein Homology CDS 50627 51598 . + 0 ID=cds-WP_001047354.1;Parent=gene-C9E93_RS04535;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9E93_RS04535;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 51830 52117 . + . ID=gene-C9E93_RS04540;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9E93_RS04540;old_locus_tag=C9E93_04700 NZ_PYJV01000029.1 Protein Homology CDS 51830 52117 . + 0 ID=cds-WP_000444168.1;Parent=gene-C9E93_RS04540;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9E93_RS04540;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 52175 53434 . - . ID=gene-C9E93_RS04545;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9E93_RS04545;old_locus_tag=C9E93_04705 NZ_PYJV01000029.1 Protein Homology CDS 52175 53434 . - 0 ID=cds-WP_000357288.1;Parent=gene-C9E93_RS04545;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9E93_RS04545;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 53488 53742 . - . ID=gene-C9E93_RS04550;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9E93_RS04550;old_locus_tag=C9E93_04710 NZ_PYJV01000029.1 Protein Homology CDS 53488 53742 . - 0 ID=cds-WP_001518349.1;Parent=gene-C9E93_RS04550;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9E93_RS04550;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 53930 54226 . - . ID=gene-C9E93_RS04555;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9E93_RS04555;old_locus_tag=C9E93_04715 NZ_PYJV01000029.1 Protein Homology CDS 53930 54226 . - 0 ID=cds-WP_000188843.1;Parent=gene-C9E93_RS04555;Dbxref=GenBank:WP_000188843.1;Name=WP_000188843.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9E93_RS04555;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188843.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 54226 54861 . - . ID=gene-C9E93_RS04560;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9E93_RS04560;old_locus_tag=C9E93_04720 NZ_PYJV01000029.1 Protein Homology CDS 54226 54861 . - 0 ID=cds-WP_000476475.1;Parent=gene-C9E93_RS04560;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9E93_RS04560;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 54880 55431 . - . ID=gene-C9E93_RS04565;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9E93_RS04565;old_locus_tag=C9E93_04725 NZ_PYJV01000029.1 Protein Homology CDS 54880 55431 . - 0 ID=cds-WP_011233188.1;Parent=gene-C9E93_RS04565;Dbxref=GenBank:WP_011233188.1;Name=WP_011233188.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9E93_RS04565;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_011233188.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 55436 56218 . - . ID=gene-C9E93_RS04570;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9E93_RS04570;old_locus_tag=C9E93_04730 NZ_PYJV01000029.1 Protein Homology CDS 55436 56218 . - 0 ID=cds-WP_000925786.1;Parent=gene-C9E93_RS04570;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9E93_RS04570;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 56226 57038 . - . ID=gene-C9E93_RS04575;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9E93_RS04575;old_locus_tag=C9E93_04735 NZ_PYJV01000029.1 Protein Homology CDS 56226 57038 . - 0 ID=cds-WP_000531566.1;Parent=gene-C9E93_RS04575;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9E93_RS04575;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 57251 58228 . + . ID=gene-C9E93_RS04580;Name=C9E93_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04580;old_locus_tag=C9E93_04740 NZ_PYJV01000029.1 Protein Homology CDS 57251 58228 . + 0 ID=cds-WP_000922736.1;Parent=gene-C9E93_RS04580;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9E93_RS04580;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 58242 59228 . + . ID=gene-C9E93_RS04585;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9E93_RS04585;old_locus_tag=C9E93_04745 NZ_PYJV01000029.1 Protein Homology CDS 58242 59228 . + 0 ID=cds-WP_135370003.1;Parent=gene-C9E93_RS04585;Dbxref=GenBank:WP_135370003.1;Name=WP_135370003.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9E93_RS04585;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_135370003.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 59249 59815 . + . ID=gene-C9E93_RS04590;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9E93_RS04590;old_locus_tag=C9E93_04750 NZ_PYJV01000029.1 Protein Homology CDS 59249 59815 . + 0 ID=cds-WP_000030029.1;Parent=gene-C9E93_RS04590;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9E93_RS04590;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 59812 60387 . + . ID=gene-C9E93_RS04595;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9E93_RS04595;old_locus_tag=C9E93_04755 NZ_PYJV01000029.1 Protein Homology CDS 59812 60387 . + 0 ID=cds-WP_000047845.1;Parent=gene-C9E93_RS04595;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9E93_RS04595;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 60356 60910 . + . ID=gene-C9E93_RS04600;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9E93_RS04600;old_locus_tag=C9E93_04760 NZ_PYJV01000029.1 Protein Homology CDS 60356 60910 . + 0 ID=cds-WP_000669770.1;Parent=gene-C9E93_RS04600;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9E93_RS04600;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 60917 61642 . + . ID=gene-C9E93_RS04605;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9E93_RS04605;old_locus_tag=C9E93_04765 NZ_PYJV01000029.1 Protein Homology CDS 60917 61642 . + 0 ID=cds-WP_000224104.1;Parent=gene-C9E93_RS04605;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9E93_RS04605;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 61690 63123 . + . ID=gene-C9E93_RS04610;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9E93_RS04610;old_locus_tag=C9E93_04770 NZ_PYJV01000029.1 Protein Homology CDS 61690 63123 . + 0 ID=cds-WP_135370004.1;Parent=gene-C9E93_RS04610;Dbxref=GenBank:WP_135370004.1;Name=WP_135370004.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9E93_RS04610;product=RNA polymerase factor sigma-54;protein_id=WP_135370004.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 63146 63433 . + . ID=gene-C9E93_RS04615;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9E93_RS04615;old_locus_tag=C9E93_04775 NZ_PYJV01000029.1 Protein Homology CDS 63146 63433 . + 0 ID=cds-WP_001176589.1;Parent=gene-C9E93_RS04615;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9E93_RS04615;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 63551 64042 . + . ID=gene-C9E93_RS04620;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9E93_RS04620;old_locus_tag=C9E93_04780 NZ_PYJV01000029.1 Protein Homology CDS 63551 64042 . + 0 ID=cds-WP_000609332.1;Parent=gene-C9E93_RS04620;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9E93_RS04620;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 64088 64942 . + . ID=gene-C9E93_RS04625;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9E93_RS04625;old_locus_tag=C9E93_04785 NZ_PYJV01000029.1 Protein Homology CDS 64088 64942 . + 0 ID=cds-WP_000243749.1;Parent=gene-C9E93_RS04625;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9E93_RS04625;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 64939 65211 . + . ID=gene-C9E93_RS04630;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9E93_RS04630;old_locus_tag=C9E93_04790 NZ_PYJV01000029.1 Protein Homology CDS 64939 65211 . + 0 ID=cds-WP_000216797.1;Parent=gene-C9E93_RS04630;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9E93_RS04630;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 65460 66092 . + . ID=gene-C9E93_RS04640;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9E93_RS04640;old_locus_tag=C9E93_04800 NZ_PYJV01000029.1 Protein Homology CDS 65460 66092 . + 0 ID=cds-WP_135370171.1;Parent=gene-C9E93_RS04640;Dbxref=GenBank:WP_135370171.1;Name=WP_135370171.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9E93_RS04640;product=PhoP regulatory network protein YrbL;protein_id=WP_135370171.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 66167 66895 . - . ID=gene-C9E93_RS04645;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9E93_RS04645;old_locus_tag=C9E93_04805 NZ_PYJV01000029.1 Protein Homology CDS 66167 66895 . - 0 ID=cds-WP_000044653.1;Parent=gene-C9E93_RS04645;Dbxref=GenBank:WP_000044653.1;Name=WP_000044653.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9E93_RS04645;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044653.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 66892 67545 . - . ID=gene-C9E93_RS04650;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9E93_RS04650;old_locus_tag=C9E93_04810 NZ_PYJV01000029.1 Protein Homology CDS 66892 67545 . - 0 ID=cds-WP_135370172.1;Parent=gene-C9E93_RS04650;Dbxref=GenBank:WP_135370172.1;Name=WP_135370172.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9E93_RS04650;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_135370172.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 67772 70108 . - . ID=gene-C9E93_RS04655;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=C9E93_RS04655;old_locus_tag=C9E93_04815 NZ_PYJV01000029.1 Protein Homology CDS 67772 70108 . - 0 ID=cds-WP_000809813.1;Parent=gene-C9E93_RS04655;Dbxref=GenBank:WP_000809813.1;Name=WP_000809813.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9E93_RS04655;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809813.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 70202 71131 . - . ID=gene-C9E93_RS04660;Name=C9E93_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04660;old_locus_tag=C9E93_04820 NZ_PYJV01000029.1 Protein Homology CDS 70202 71131 . - 0 ID=cds-WP_001176879.1;Parent=gene-C9E93_RS04660;Dbxref=GenBank:WP_001176879.1;Name=WP_001176879.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9E93_RS04660;product=TIGR01212 family radical SAM protein;protein_id=WP_001176879.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 71803 76263 . + . ID=gene-C9E93_RS04665;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9E93_RS04665;old_locus_tag=C9E93_04830 NZ_PYJV01000029.1 Protein Homology CDS 71803 76263 . + 0 ID=cds-WP_001748595.1;Parent=gene-C9E93_RS04665;Dbxref=GenBank:WP_001748595.1;Name=WP_001748595.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9E93_RS04665;product=glutamate synthase large subunit;protein_id=WP_001748595.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 76273 77691 . + . ID=gene-C9E93_RS04670;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9E93_RS04670;old_locus_tag=C9E93_04835 NZ_PYJV01000029.1 Protein Homology CDS 76273 77691 . + 0 ID=cds-WP_135370173.1;Parent=gene-C9E93_RS04670;Dbxref=GenBank:WP_135370173.1;Name=WP_135370173.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9E93_RS04670;product=glutamate synthase subunit GltD;protein_id=WP_135370173.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 77899 79002 . + . ID=gene-C9E93_RS04675;Name=C9E93_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04675;old_locus_tag=C9E93_04840 NZ_PYJV01000029.1 Protein Homology CDS 77899 79002 . + 0 ID=cds-WP_000184305.1;Parent=gene-C9E93_RS04675;Dbxref=GenBank:WP_000184305.1;Name=WP_000184305.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9E93_RS04675;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184305.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 79118 80371 . + . ID=gene-C9E93_RS04680;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9E93_RS04680;old_locus_tag=C9E93_04845 NZ_PYJV01000029.1 Protein Homology CDS 79118 80371 . + 0 ID=cds-WP_000076271.1;Parent=gene-C9E93_RS04680;Dbxref=GenBank:WP_000076271.1;Name=WP_000076271.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9E93_RS04680;product=cytosine permease;protein_id=WP_000076271.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 80358 81638 . + . ID=gene-C9E93_RS04685;Name=C9E93_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04685;old_locus_tag=C9E93_04850 NZ_PYJV01000029.1 Protein Homology CDS 80358 81638 . + 0 ID=cds-WP_135370174.1;Parent=gene-C9E93_RS04685;Dbxref=GenBank:WP_135370174.1;Name=WP_135370174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9E93_RS04685;product=cytosine deaminase;protein_id=WP_135370174.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 81722 82189 . - . ID=gene-C9E93_RS04690;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9E93_RS04690;old_locus_tag=C9E93_04855 NZ_PYJV01000029.1 Protein Homology CDS 81722 82189 . - 0 ID=cds-WP_000979900.1;Parent=gene-C9E93_RS04690;Dbxref=GenBank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9E93_RS04690;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 82186 83061 . - . ID=gene-C9E93_RS04695;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9E93_RS04695;old_locus_tag=C9E93_04860 NZ_PYJV01000029.1 Protein Homology CDS 82186 83061 . - 0 ID=cds-WP_023233634.1;Parent=gene-C9E93_RS04695;Dbxref=GenBank:WP_023233634.1;Name=WP_023233634.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9E93_RS04695;product=N-acetylmannosamine kinase;protein_id=WP_023233634.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 83058 83747 . - . ID=gene-C9E93_RS04700;Name=C9E93_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04700;old_locus_tag=C9E93_04865 NZ_PYJV01000029.1 Protein Homology CDS 83058 83747 . - 0 ID=cds-WP_000054444.1;Parent=gene-C9E93_RS04700;Dbxref=GenBank:WP_000054444.1;Name=WP_000054444.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9E93_RS04700;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054444.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 83794 85284 . - . ID=gene-C9E93_RS04705;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9E93_RS04705;old_locus_tag=C9E93_04870 NZ_PYJV01000029.1 Protein Homology CDS 83794 85284 . - 0 ID=cds-WP_000108071.1;Parent=gene-C9E93_RS04705;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9E93_RS04705;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 85400 86293 . - . ID=gene-C9E93_RS04710;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9E93_RS04710;old_locus_tag=C9E93_04875 NZ_PYJV01000029.1 Protein Homology CDS 85400 86293 . - 0 ID=cds-WP_001029667.1;Parent=gene-C9E93_RS04710;Dbxref=GenBank:WP_001029667.1;Name=WP_001029667.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9E93_RS04710;product=N-acetylneuraminate lyase;protein_id=WP_001029667.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 86428 87219 . - . ID=gene-C9E93_RS04715;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9E93_RS04715;old_locus_tag=C9E93_04880 NZ_PYJV01000029.1 Protein Homology CDS 86428 87219 . - 0 ID=cds-WP_000382926.1;Parent=gene-C9E93_RS04715;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9E93_RS04715;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 87328 87828 . - . ID=gene-C9E93_RS04720;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9E93_RS04720;old_locus_tag=C9E93_04885 NZ_PYJV01000029.1 Protein Homology CDS 87328 87828 . - 0 ID=cds-WP_000366112.1;Parent=gene-C9E93_RS04720;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9E93_RS04720;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 87834 88472 . - . ID=gene-C9E93_RS04725;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9E93_RS04725;old_locus_tag=C9E93_04890 NZ_PYJV01000029.1 Protein Homology CDS 87834 88472 . - 0 ID=cds-WP_000257298.1;Parent=gene-C9E93_RS04725;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9E93_RS04725;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 88735 89487 . - . ID=gene-C9E93_RS04730;Name=C9E93_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04730;old_locus_tag=C9E93_04895 NZ_PYJV01000029.1 Protein Homology CDS 88735 89487 . - 0 ID=cds-WP_000950539.1;Parent=gene-C9E93_RS04730;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=C9E93_RS04730;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 89687 90079 . - . ID=gene-C9E93_RS04740;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9E93_RS04740;old_locus_tag=C9E93_04905 NZ_PYJV01000029.1 Protein Homology CDS 89687 90079 . - 0 ID=cds-WP_000829815.1;Parent=gene-C9E93_RS04740;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9E93_RS04740;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 90095 90523 . - . ID=gene-C9E93_RS04745;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9E93_RS04745;old_locus_tag=C9E93_04910 NZ_PYJV01000029.1 Protein Homology CDS 90095 90523 . - 0 ID=cds-WP_000847559.1;Parent=gene-C9E93_RS04745;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9E93_RS04745;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 90826 91950 . - . ID=gene-C9E93_RS04750;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9E93_RS04750;old_locus_tag=C9E93_04915 NZ_PYJV01000029.1 Protein Homology CDS 90826 91950 . - 0 ID=cds-WP_001191222.1;Parent=gene-C9E93_RS04750;Dbxref=GenBank:WP_001191222.1;Name=WP_001191222.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9E93_RS04750;product=cell division protein ZapE;protein_id=WP_001191222.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 92143 92541 . + . ID=gene-C9E93_RS04755;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9E93_RS04755;old_locus_tag=C9E93_04920 NZ_PYJV01000029.1 Protein Homology CDS 92143 92541 . + 0 ID=cds-WP_001519074.1;Parent=gene-C9E93_RS04755;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9E93_RS04755;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 92698 94065 . + . ID=gene-C9E93_RS04760;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9E93_RS04760;old_locus_tag=C9E93_04925 NZ_PYJV01000029.1 Protein Homology CDS 92698 94065 . + 0 ID=cds-WP_000716690.1;Parent=gene-C9E93_RS04760;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9E93_RS04760;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 94158 95228 . + . ID=gene-C9E93_RS04765;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=C9E93_RS04765;old_locus_tag=C9E93_04930 NZ_PYJV01000029.1 Protein Homology CDS 94158 95228 . + 0 ID=cds-WP_000497705.1;Parent=gene-C9E93_RS04765;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9E93_RS04765;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_PYJV01000029.1 RefSeq gene 95262 95993 . - . ID=gene-C9E93_RS04770;Name=C9E93_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04770;old_locus_tag=C9E93_04935 NZ_PYJV01000029.1 Protein Homology CDS 95262 95993 . - 0 ID=cds-WP_058144879.1;Parent=gene-C9E93_RS04770;Dbxref=GenBank:WP_058144879.1;Name=WP_058144879.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9E93_RS04770;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_058144879.1;transl_table=11 ##sequence-region NZ_PYJV01000090.1 1 93206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000090.1 RefSeq region 1 93206 . + . ID=NZ_PYJV01000090.1:1..93206;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000090.1 RefSeq gene 100 176 . + . ID=gene-C9E93_RS15770;Name=C9E93_RS15770;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15770;old_locus_tag=C9E93_16180 NZ_PYJV01000090.1 tRNAscan-SE tRNA 100 176 . + . ID=rna-C9E93_RS15770;Parent=gene-C9E93_RS15770;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15770;product=tRNA-Asp NZ_PYJV01000090.1 tRNAscan-SE exon 100 176 . + . ID=exon-C9E93_RS15770-1;Parent=rna-C9E93_RS15770;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15770;product=tRNA-Asp NZ_PYJV01000090.1 RefSeq gene 185 260 . + . ID=gene-C9E93_RS15775;Name=C9E93_RS15775;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15775;old_locus_tag=C9E93_16185 NZ_PYJV01000090.1 tRNAscan-SE tRNA 185 260 . + . ID=rna-C9E93_RS15775;Parent=gene-C9E93_RS15775;anticodon=(pos:218..220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15775;product=tRNA-Trp NZ_PYJV01000090.1 tRNAscan-SE exon 185 260 . + . ID=exon-C9E93_RS15775-1;Parent=rna-C9E93_RS15775;anticodon=(pos:218..220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15775;product=tRNA-Trp NZ_PYJV01000090.1 RefSeq gene 362 1210 . - . ID=gene-C9E93_RS15780;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9E93_RS15780;old_locus_tag=C9E93_16190 NZ_PYJV01000090.1 Protein Homology CDS 362 1210 . - 0 ID=cds-WP_086008739.1;Parent=gene-C9E93_RS15780;Dbxref=GenBank:WP_086008739.1;Name=WP_086008739.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9E93_RS15780;product=HTH-type transcriptional regulator HdfR;protein_id=WP_086008739.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 1317 1655 . + . ID=gene-C9E93_RS15785;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9E93_RS15785;old_locus_tag=C9E93_16195 NZ_PYJV01000090.1 Protein Homology CDS 1317 1655 . + 0 ID=cds-WP_000840996.1;Parent=gene-C9E93_RS15785;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9E93_RS15785;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 1680 3200 . - . ID=gene-C9E93_RS15790;Name=C9E93_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15790;old_locus_tag=C9E93_16200 NZ_PYJV01000090.1 Protein Homology CDS 1680 3200 . - 0 ID=cds-WP_023994477.1;Parent=gene-C9E93_RS15790;Dbxref=GenBank:WP_023994477.1;Name=WP_023994477.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9E93_RS15790;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_023994477.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 3552 3650 . + . ID=gene-C9E93_RS15795;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9E93_RS15795;old_locus_tag=C9E93_16205 NZ_PYJV01000090.1 Protein Homology CDS 3552 3650 . + 0 ID=cds-WP_001311244.1;Parent=gene-C9E93_RS15795;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9E93_RS15795;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 3737 3787 . + . ID=gene-C9E93_RS23770;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9E93_RS23770 NZ_PYJV01000090.1 Protein Homology CDS 3737 3787 . + 0 ID=cds-WP_192930503.1;Parent=gene-C9E93_RS23770;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=C9E93_RS23770;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 3790 5436 . + . ID=gene-C9E93_RS15800;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9E93_RS15800;old_locus_tag=C9E93_16210 NZ_PYJV01000090.1 Protein Homology CDS 3790 5436 . + 0 ID=cds-WP_135370566.1;Parent=gene-C9E93_RS15800;Dbxref=GenBank:WP_135370566.1;Name=WP_135370566.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9E93_RS15800;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_135370566.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 5433 5696 . + . ID=gene-C9E93_RS15805;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9E93_RS15805;old_locus_tag=C9E93_16215 NZ_PYJV01000090.1 Protein Homology CDS 5433 5696 . + 0 ID=cds-WP_000983260.1;Parent=gene-C9E93_RS15805;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9E93_RS15805;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 5714 6643 . + . ID=gene-C9E93_RS15810;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9E93_RS15810;old_locus_tag=C9E93_16220 NZ_PYJV01000090.1 Protein Homology CDS 5714 6643 . + 0 ID=cds-WP_000208532.1;Parent=gene-C9E93_RS15810;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9E93_RS15810;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 6803 8653 . + . ID=gene-C9E93_RS15815;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E93_RS15815;old_locus_tag=C9E93_16225 NZ_PYJV01000090.1 Protein Homology CDS 6803 8653 . + 0 ID=cds-WP_001127429.1;Parent=gene-C9E93_RS15815;Dbxref=GenBank:WP_001127429.1;Name=WP_001127429.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9E93_RS15815;product=dihydroxy-acid dehydratase;protein_id=WP_001127429.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 8656 10200 . + . ID=gene-C9E93_RS15820;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9E93_RS15820;old_locus_tag=C9E93_16230 NZ_PYJV01000090.1 Protein Homology CDS 8656 10200 . + 0 ID=cds-WP_001524959.1;Parent=gene-C9E93_RS15820;Dbxref=GenBank:WP_001524959.1;Name=WP_001524959.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9E93_RS15820;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001524959.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 10306 11007 . + . ID=gene-C9E93_RS15825;Name=C9E93_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15825;old_locus_tag=C9E93_16235 NZ_PYJV01000090.1 Protein Homology CDS 10306 11007 . + 0 ID=cds-WP_001544634.1;Parent=gene-C9E93_RS15825;Dbxref=GenBank:WP_001544634.1;Name=WP_001544634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929969.1;locus_tag=C9E93_RS15825;product=DUF2461 domain-containing protein;protein_id=WP_001544634.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 11018 11392 . - . ID=gene-C9E93_RS15830;Name=C9E93_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15830;old_locus_tag=C9E93_16240 NZ_PYJV01000090.1 Protein Homology CDS 11018 11392 . - 0 ID=cds-WP_000937045.1;Parent=gene-C9E93_RS15830;Dbxref=GenBank:WP_000937045.1;Name=WP_000937045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937044.1;locus_tag=C9E93_RS15830;product=hypothetical protein;protein_id=WP_000937045.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 11406 11780 . - . ID=gene-C9E93_RS15835;Name=C9E93_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15835;old_locus_tag=C9E93_16245 NZ_PYJV01000090.1 Protein Homology CDS 11406 11780 . - 0 ID=cds-WP_001609034.1;Parent=gene-C9E93_RS15835;Dbxref=GenBank:WP_001609034.1;Name=WP_001609034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554297.1;locus_tag=C9E93_RS15835;product=hypothetical protein;protein_id=WP_001609034.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 11808 12695 . - . ID=gene-C9E93_RS15840;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=C9E93_RS15840;old_locus_tag=C9E93_16250 NZ_PYJV01000090.1 Protein Homology CDS 11808 12695 . - 0 ID=cds-WP_135370567.1;Parent=gene-C9E93_RS15840;Dbxref=GenBank:WP_135370567.1;Name=WP_135370567.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530887.1;locus_tag=C9E93_RS15840;product=HTH-type transcriptional activator IlvY;protein_id=WP_135370567.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 12849 14324 . + . ID=gene-C9E93_RS15845;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9E93_RS15845;old_locus_tag=C9E93_16255 NZ_PYJV01000090.1 Protein Homology CDS 12849 14324 . + 0 ID=cds-WP_000024943.1;Parent=gene-C9E93_RS15845;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9E93_RS15845;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 14416 14697 . - . ID=gene-C9E93_RS15850;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9E93_RS15850;old_locus_tag=C9E93_16260 NZ_PYJV01000090.1 Protein Homology CDS 14416 14697 . - 0 ID=cds-WP_001096806.1;Parent=gene-C9E93_RS15850;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9E93_RS15850;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 14891 15592 . + . ID=gene-C9E93_RS15855;Name=C9E93_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15855;old_locus_tag=C9E93_16265 NZ_PYJV01000090.1 Protein Homology CDS 14891 15592 . + 0 ID=cds-WP_001024340.1;Parent=gene-C9E93_RS15855;Dbxref=GenBank:WP_001024340.1;Name=WP_001024340.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=C9E93_RS15855;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001024340.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 15621 16364 . + . ID=gene-C9E93_RS15860;Name=C9E93_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15860;old_locus_tag=C9E93_16270 NZ_PYJV01000090.1 Protein Homology CDS 15621 16364 . + 0 ID=cds-WP_001182428.1;Parent=gene-C9E93_RS15860;Dbxref=GenBank:WP_001182428.1;Name=WP_001182428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182423.1;locus_tag=C9E93_RS15860;product=nucleoside phosphorylase;protein_id=WP_001182428.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 16364 17092 . + . ID=gene-C9E93_RS15865;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9E93_RS15865;old_locus_tag=C9E93_16275 NZ_PYJV01000090.1 Protein Homology CDS 16364 17092 . + 0 ID=cds-WP_135370570.1;Parent=gene-C9E93_RS15865;Dbxref=GenBank:WP_135370570.1;Name=WP_135370570.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=C9E93_RS15865;product=nicotinamide riboside transporter PnuC;protein_id=WP_135370570.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 17192 19216 . + . ID=gene-C9E93_RS15870;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9E93_RS15870;old_locus_tag=C9E93_16280 NZ_PYJV01000090.1 Protein Homology CDS 17192 19216 . + 0 ID=cds-WP_001238842.1;Parent=gene-C9E93_RS15870;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9E93_RS15870;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 19256 20737 . - . ID=gene-C9E93_RS15875;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=C9E93_RS15875;old_locus_tag=C9E93_16285 NZ_PYJV01000090.1 Protein Homology CDS 19256 20737 . - 0 ID=cds-WP_001089447.1;Parent=gene-C9E93_RS15875;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9E93_RS15875;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 20856 22121 . - . ID=gene-C9E93_RS15880;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9E93_RS15880;old_locus_tag=C9E93_16295 NZ_PYJV01000090.1 Protein Homology CDS 20856 22121 . - 0 ID=cds-WP_000047525.1;Parent=gene-C9E93_RS15880;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9E93_RS15880;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 22265 22594 . + . ID=gene-C9E93_RS15885;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9E93_RS15885;old_locus_tag=C9E93_16300 NZ_PYJV01000090.1 Protein Homology CDS 22265 22594 . + 0 ID=cds-WP_001280776.1;Parent=gene-C9E93_RS15885;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9E93_RS15885;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 22842 22925 . + . ID=gene-C9E93_RS23960;Name=C9E93_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23960 NZ_PYJV01000090.1 Protein Homology CDS 22842 22925 . + 0 ID=cds-WP_134820045.1;Parent=gene-C9E93_RS23960;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9E93_RS23960;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 23013 24272 . + . ID=gene-C9E93_RS15895;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9E93_RS15895;old_locus_tag=C9E93_16310 NZ_PYJV01000090.1 Protein Homology CDS 23013 24272 . + 0 ID=cds-WP_001054532.1;Parent=gene-C9E93_RS15895;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9E93_RS15895;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 24502 25605 . + . ID=gene-C9E93_RS15900;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9E93_RS15900;old_locus_tag=C9E93_16315 NZ_PYJV01000090.1 Protein Homology CDS 24502 25605 . + 0 ID=cds-WP_000771937.1;Parent=gene-C9E93_RS15900;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=C9E93_RS15900;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 25617 26663 . + . ID=gene-C9E93_RS15905;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9E93_RS15905;old_locus_tag=C9E93_16320 NZ_PYJV01000090.1 Protein Homology CDS 25617 26663 . + 0 ID=cds-WP_000193413.1;Parent=gene-C9E93_RS15905;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9E93_RS15905;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 26719 27849 . + . ID=gene-C9E93_RS15910;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9E93_RS15910;old_locus_tag=C9E93_16325 NZ_PYJV01000090.1 Protein Homology CDS 26719 27849 . + 0 ID=cds-WP_000866685.1;Parent=gene-C9E93_RS15910;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9E93_RS15910;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 27846 29108 . + . ID=gene-C9E93_RS15915;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9E93_RS15915;old_locus_tag=C9E93_16330 NZ_PYJV01000090.1 Protein Homology CDS 27846 29108 . + 0 ID=cds-WP_135370568.1;Parent=gene-C9E93_RS15915;Dbxref=GenBank:WP_135370568.1;Name=WP_135370568.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9E93_RS15915;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_135370568.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 29108 30175 . + . ID=gene-C9E93_RS15920;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9E93_RS15920;old_locus_tag=C9E93_16335 NZ_PYJV01000090.1 Protein Homology CDS 29108 30175 . + 0 ID=cds-WP_000822143.1;Parent=gene-C9E93_RS15920;Dbxref=GenBank:WP_000822143.1;Name=WP_000822143.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9E93_RS15920;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822143.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 30118 30432 . + . ID=gene-C9E93_RS15925;Name=C9E93_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15925;old_locus_tag=C9E93_16340 NZ_PYJV01000090.1 Protein Homology CDS 30118 30432 . + 0 ID=cds-WP_223149427.1;Parent=gene-C9E93_RS15925;Dbxref=GenBank:WP_223149427.1;Name=WP_223149427.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9E93_RS15925;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223149427.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 30410 31087 . + . ID=gene-C9E93_RS15930;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9E93_RS15930;old_locus_tag=C9E93_16345 NZ_PYJV01000090.1 Protein Homology CDS 30410 31087 . + 0 ID=cds-WP_001145156.1;Parent=gene-C9E93_RS15930;Dbxref=GenBank:WP_001145156.1;Name=WP_001145156.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9E93_RS15930;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145156.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 31092 32222 . + . ID=gene-C9E93_RS15935;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9E93_RS15935;old_locus_tag=C9E93_16350 NZ_PYJV01000090.1 Protein Homology CDS 31092 32222 . + 0 ID=cds-WP_000612080.1;Parent=gene-C9E93_RS15935;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9E93_RS15935;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 32224 33474 . + . ID=gene-C9E93_RS15940;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9E93_RS15940;old_locus_tag=C9E93_16355 NZ_PYJV01000090.1 Protein Homology CDS 32224 33474 . + 0 ID=cds-WP_000050288.1;Parent=gene-C9E93_RS15940;Dbxref=GenBank:WP_000050288.1;Name=WP_000050288.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9E93_RS15940;product=lipid III flippase WzxE;protein_id=WP_000050288.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 33471 34550 . + . ID=gene-C9E93_RS15945;Name=C9E93_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15945;old_locus_tag=C9E93_16360 NZ_PYJV01000090.1 Protein Homology CDS 33471 34550 . + 0 ID=cds-WP_135370569.1;Parent=gene-C9E93_RS15945;Dbxref=GenBank:WP_135370569.1;Name=WP_135370569.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9E93_RS15945;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_135370569.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 34547 35905 . + . ID=gene-C9E93_RS15950;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9E93_RS15950;old_locus_tag=C9E93_16365 NZ_PYJV01000090.1 Protein Homology CDS 34547 35905 . + 0 ID=cds-WP_000055605.1;Parent=gene-C9E93_RS15950;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9E93_RS15950;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 35902 36642 . + . ID=gene-C9E93_RS15955;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=C9E93_RS15955;old_locus_tag=C9E93_16370 NZ_PYJV01000090.1 Protein Homology CDS 35902 36642 . + 0 ID=cds-WP_000183621.1;Parent=gene-C9E93_RS15955;Dbxref=GenBank:WP_000183621.1;Name=WP_000183621.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9E93_RS15955;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183621.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 36849 38234 . + . ID=gene-C9E93_RS15960;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=C9E93_RS15960;old_locus_tag=C9E93_16375 NZ_PYJV01000090.1 Protein Homology CDS 36849 38234 . + 0 ID=cds-WP_000818378.1;Parent=gene-C9E93_RS15960;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9E93_RS15960;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 38337 38413 . + . ID=gene-C9E93_RS15965;Name=C9E93_RS15965;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15965;old_locus_tag=C9E93_16380 NZ_PYJV01000090.1 tRNAscan-SE tRNA 38337 38413 . + . ID=rna-C9E93_RS15965;Parent=gene-C9E93_RS15965;anticodon=(pos:38371..38373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15965;product=tRNA-Arg NZ_PYJV01000090.1 tRNAscan-SE exon 38337 38413 . + . ID=exon-C9E93_RS15965-1;Parent=rna-C9E93_RS15965;anticodon=(pos:38371..38373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15965;product=tRNA-Arg NZ_PYJV01000090.1 RefSeq gene 38468 38543 . + . ID=gene-C9E93_RS15970;Name=C9E93_RS15970;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15970;old_locus_tag=C9E93_16385 NZ_PYJV01000090.1 tRNAscan-SE tRNA 38468 38543 . + . ID=rna-C9E93_RS15970;Parent=gene-C9E93_RS15970;anticodon=(pos:38501..38503);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15970;product=tRNA-His NZ_PYJV01000090.1 tRNAscan-SE exon 38468 38543 . + . ID=exon-C9E93_RS15970-1;Parent=rna-C9E93_RS15970;anticodon=(pos:38501..38503);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15970;product=tRNA-His NZ_PYJV01000090.1 RefSeq gene 38564 38650 . + . ID=gene-C9E93_RS15975;Name=C9E93_RS15975;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15975;old_locus_tag=C9E93_16390 NZ_PYJV01000090.1 tRNAscan-SE tRNA 38564 38650 . + . ID=rna-C9E93_RS15975;Parent=gene-C9E93_RS15975;anticodon=(pos:38598..38600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15975;product=tRNA-Leu NZ_PYJV01000090.1 tRNAscan-SE exon 38564 38650 . + . ID=exon-C9E93_RS15975-1;Parent=rna-C9E93_RS15975;anticodon=(pos:38598..38600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15975;product=tRNA-Leu NZ_PYJV01000090.1 RefSeq gene 38693 38769 . + . ID=gene-C9E93_RS15980;Name=C9E93_RS15980;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15980;old_locus_tag=C9E93_16395 NZ_PYJV01000090.1 tRNAscan-SE tRNA 38693 38769 . + . ID=rna-C9E93_RS15980;Parent=gene-C9E93_RS15980;anticodon=(pos:38727..38729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15980;product=tRNA-Pro NZ_PYJV01000090.1 tRNAscan-SE exon 38693 38769 . + . ID=exon-C9E93_RS15980-1;Parent=rna-C9E93_RS15980;anticodon=(pos:38727..38729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15980;product=tRNA-Pro NZ_PYJV01000090.1 RefSeq gene 39351 40547 . - . ID=gene-C9E93_RS15985;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9E93_RS15985;old_locus_tag=C9E93_16400 NZ_PYJV01000090.1 Protein Homology CDS 39351 40547 . - 0 ID=cds-WP_023602562.1;Parent=gene-C9E93_RS15985;Dbxref=GenBank:WP_023602562.1;Name=WP_023602562.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9E93_RS15985;product=protoheme IX biogenesis protein HemY;protein_id=WP_023602562.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 40550 41719 . - . ID=gene-C9E93_RS15990;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9E93_RS15990;old_locus_tag=C9E93_16405 NZ_PYJV01000090.1 Protein Homology CDS 40550 41719 . - 0 ID=cds-WP_000138962.1;Parent=gene-C9E93_RS15990;Dbxref=GenBank:WP_000138962.1;Name=WP_000138962.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9E93_RS15990;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138962.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 41741 42481 . - . ID=gene-C9E93_RS15995;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9E93_RS15995;old_locus_tag=C9E93_16410 NZ_PYJV01000090.1 Protein Homology CDS 41741 42481 . - 0 ID=cds-WP_000025498.1;Parent=gene-C9E93_RS15995;Dbxref=GenBank:WP_000025498.1;Name=WP_000025498.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9E93_RS15995;product=uroporphyrinogen-III synthase;protein_id=WP_000025498.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 42478 43419 . - . ID=gene-C9E93_RS16000;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9E93_RS16000;old_locus_tag=C9E93_16415 NZ_PYJV01000090.1 Protein Homology CDS 42478 43419 . - 0 ID=cds-WP_001521319.1;Parent=gene-C9E93_RS16000;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9E93_RS16000;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 43796 46342 . + . ID=gene-C9E93_RS16005;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9E93_RS16005;old_locus_tag=C9E93_16420 NZ_PYJV01000090.1 Protein Homology CDS 43796 46342 . + 0 ID=cds-WP_000281718.1;Parent=gene-C9E93_RS16005;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9E93_RS16005;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 46450 46806 . + . ID=gene-C9E93_RS16010;Name=C9E93_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16010;old_locus_tag=C9E93_16425 NZ_PYJV01000090.1 Protein Homology CDS 46450 46806 . + 0 ID=cds-WP_039590844.1;Parent=gene-C9E93_RS16010;Dbxref=GenBank:WP_039590844.1;Name=WP_039590844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=C9E93_RS16010;product=hypothetical protein;protein_id=WP_039590844.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 46992 47534 . + . ID=gene-C9E93_RS16015;Name=C9E93_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16015;old_locus_tag=C9E93_16430 NZ_PYJV01000090.1 Protein Homology CDS 46992 47534 . + 0 ID=cds-WP_135400625.1;Parent=gene-C9E93_RS16015;Dbxref=GenBank:WP_135400625.1;Name=WP_135400625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=C9E93_RS16015;product=STM3941 family protein;protein_id=WP_135400625.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 47546 47908 . + . ID=gene-C9E93_RS16020;Name=C9E93_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16020;old_locus_tag=C9E93_16435 NZ_PYJV01000090.1 Protein Homology CDS 47546 47908 . + 0 ID=cds-WP_135369914.1;Parent=gene-C9E93_RS16020;Dbxref=GenBank:WP_135369914.1;Name=WP_135369914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=C9E93_RS16020;product=hypothetical protein;protein_id=WP_135369914.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 47979 48299 . - . ID=gene-C9E93_RS16025;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9E93_RS16025;old_locus_tag=C9E93_16440 NZ_PYJV01000090.1 Protein Homology CDS 47979 48299 . - 0 ID=cds-WP_000999927.1;Parent=gene-C9E93_RS16025;Dbxref=GenBank:WP_000999927.1;Name=WP_000999927.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9E93_RS16025;product=iron donor protein CyaY;protein_id=WP_000999927.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 48369 48758 . - . ID=gene-C9E93_RS16030;Name=C9E93_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16030;old_locus_tag=C9E93_16445 NZ_PYJV01000090.1 Protein Homology CDS 48369 48758 . - 0 ID=cds-WP_001125556.1;Parent=gene-C9E93_RS16030;Dbxref=GenBank:WP_001125556.1;Name=WP_001125556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9E93_RS16030;product=DUF3021 family protein;protein_id=WP_001125556.1;transl_table=11 NZ_PYJV01000090.1 RefSeq pseudogene 48746 49047 . - . ID=gene-C9E93_RS16035;Name=C9E93_RS16035;end_range=49047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16035;old_locus_tag=C9E93_16450;partial=true;pseudo=true NZ_PYJV01000090.1 Protein Homology CDS 48746 49047 . - 0 ID=cds-C9E93_RS16035;Parent=gene-C9E93_RS16035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=49047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=C9E93_RS16035;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 49017 49268 . - . ID=gene-C9E93_RS23620;Name=C9E93_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23620;old_locus_tag=C9E93_16455 NZ_PYJV01000090.1 GeneMarkS-2+ CDS 49017 49268 . - 0 ID=cds-WP_024145461.1;Parent=gene-C9E93_RS23620;Dbxref=GenBank:WP_024145461.1;Name=WP_024145461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23620;product=hypothetical protein;protein_id=WP_024145461.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 49454 49657 . + . ID=gene-C9E93_RS16040;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=C9E93_RS16040;old_locus_tag=C9E93_16460 NZ_PYJV01000090.1 Protein Homology CDS 49454 49657 . + 0 ID=cds-WP_000799903.1;Parent=gene-C9E93_RS16040;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9E93_RS16040;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 49694 50518 . + . ID=gene-C9E93_RS16045;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9E93_RS16045;old_locus_tag=C9E93_16465 NZ_PYJV01000090.1 Protein Homology CDS 49694 50518 . + 0 ID=cds-WP_001160671.1;Parent=gene-C9E93_RS16045;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9E93_RS16045;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 50515 51222 . + . ID=gene-C9E93_RS16050;Name=C9E93_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16050;old_locus_tag=C9E93_16470 NZ_PYJV01000090.1 Protein Homology CDS 50515 51222 . + 0 ID=cds-WP_000812763.1;Parent=gene-C9E93_RS16050;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9E93_RS16050;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 51219 52121 . + . ID=gene-C9E93_RS16055;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E93_RS16055;old_locus_tag=C9E93_16475 NZ_PYJV01000090.1 Protein Homology CDS 51219 52121 . + 0 ID=cds-WP_135369913.1;Parent=gene-C9E93_RS16055;Dbxref=GenBank:WP_135369913.1;Name=WP_135369913.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9E93_RS16055;product=tyrosine recombinase XerC;protein_id=WP_135369913.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 52121 52837 . + . ID=gene-C9E93_RS16060;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9E93_RS16060;old_locus_tag=C9E93_16480 NZ_PYJV01000090.1 Protein Homology CDS 52121 52837 . + 0 ID=cds-WP_001213560.1;Parent=gene-C9E93_RS16060;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9E93_RS16060;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 52973 55135 . + . ID=gene-C9E93_RS16065;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9E93_RS16065;old_locus_tag=C9E93_16485 NZ_PYJV01000090.1 Protein Homology CDS 52973 55135 . + 0 ID=cds-WP_023993646.1;Parent=gene-C9E93_RS16065;Dbxref=GenBank:WP_023993646.1;Name=WP_023993646.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9E93_RS16065;product=DNA helicase II;protein_id=WP_023993646.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 55395 55451 . + . ID=gene-C9E93_RS23775;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9E93_RS23775 NZ_PYJV01000090.1 Protein Homology CDS 55395 55451 . + 0 ID=cds-WP_212723238.1;Parent=gene-C9E93_RS23775;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9E93_RS23775;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 55607 56557 . + . ID=gene-C9E93_RS16075;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9E93_RS16075;old_locus_tag=C9E93_16495 NZ_PYJV01000090.1 Protein Homology CDS 55607 56557 . + 0 ID=cds-WP_000947139.1;Parent=gene-C9E93_RS16075;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9E93_RS16075;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 56606 56986 . - . ID=gene-C9E93_RS16080;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=C9E93_RS16080;old_locus_tag=C9E93_16500 NZ_PYJV01000090.1 Protein Homology CDS 56606 56986 . - 0 ID=cds-WP_000356594.1;Parent=gene-C9E93_RS16080;Dbxref=GenBank:WP_000356594.1;Name=WP_000356594.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=C9E93_RS16080;product=inner membrane protein YigF;protein_id=WP_000356594.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 57002 57460 . - . ID=gene-C9E93_RS16085;Name=C9E93_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16085;old_locus_tag=C9E93_16505 NZ_PYJV01000090.1 Protein Homology CDS 57002 57460 . - 0 ID=cds-WP_135369912.1;Parent=gene-C9E93_RS16085;Dbxref=GenBank:WP_135369912.1;Name=WP_135369912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=C9E93_RS16085;product=hypothetical protein;protein_id=WP_135369912.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 57495 58379 . - . ID=gene-C9E93_RS16090;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E93_RS16090;old_locus_tag=C9E93_16510 NZ_PYJV01000090.1 Protein Homology CDS 57495 58379 . - 0 ID=cds-WP_000339080.1;Parent=gene-C9E93_RS16090;Dbxref=GenBank:WP_000339080.1;Name=WP_000339080.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=C9E93_RS16090;product=EamA family transporter RarD;protein_id=WP_000339080.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 58423 58890 . - . ID=gene-C9E93_RS16095;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=C9E93_RS16095;old_locus_tag=C9E93_16515 NZ_PYJV01000090.1 Protein Homology CDS 58423 58890 . - 0 ID=cds-WP_001277136.1;Parent=gene-C9E93_RS16095;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9E93_RS16095;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 59055 59924 . + . ID=gene-C9E93_RS16100;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9E93_RS16100;old_locus_tag=C9E93_16520 NZ_PYJV01000090.1 Protein Homology CDS 59055 59924 . + 0 ID=cds-WP_001201692.1;Parent=gene-C9E93_RS16100;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9E93_RS16100;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 60008 61837 . + . ID=gene-C9E93_RS16105;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9E93_RS16105;old_locus_tag=C9E93_16525 NZ_PYJV01000090.1 Protein Homology CDS 60008 61837 . + 0 ID=cds-WP_001533487.1;Parent=gene-C9E93_RS16105;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9E93_RS16105;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 61901 62521 . + . ID=gene-C9E93_RS16110;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=C9E93_RS16110;old_locus_tag=C9E93_16530 NZ_PYJV01000090.1 Protein Homology CDS 61901 62521 . + 0 ID=cds-WP_000980080.1;Parent=gene-C9E93_RS16110;Dbxref=GenBank:WP_000980080.1;Name=WP_000980080.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9E93_RS16110;product=threonine export protein RhtC;protein_id=WP_000980080.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 62561 63181 . - . ID=gene-C9E93_RS16115;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9E93_RS16115;old_locus_tag=C9E93_16535 NZ_PYJV01000090.1 Protein Homology CDS 62561 63181 . - 0 ID=cds-WP_000142521.1;Parent=gene-C9E93_RS16115;Dbxref=GenBank:WP_000142521.1;Name=WP_000142521.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9E93_RS16115;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142521.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 63292 64308 . + . ID=gene-C9E93_RS16120;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9E93_RS16120;old_locus_tag=C9E93_16540 NZ_PYJV01000090.1 Protein Homology CDS 63292 64308 . + 0 ID=cds-WP_000487685.1;Parent=gene-C9E93_RS16120;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9E93_RS16120;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 64324 65124 . + . ID=gene-C9E93_RS16125;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9E93_RS16125;old_locus_tag=C9E93_16545 NZ_PYJV01000090.1 Protein Homology CDS 64324 65124 . + 0 ID=cds-WP_000285338.1;Parent=gene-C9E93_RS16125;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9E93_RS16125;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 65205 66104 . + . ID=gene-C9E93_RS16130;Name=C9E93_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16130;old_locus_tag=C9E93_16550 NZ_PYJV01000090.1 Protein Homology CDS 65205 66104 . + 0 ID=cds-WP_001196257.1;Parent=gene-C9E93_RS16130;Dbxref=GenBank:WP_001196257.1;Name=WP_001196257.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9E93_RS16130;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196257.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 65992 66945 . - . ID=gene-C9E93_RS16135;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9E93_RS16135;old_locus_tag=C9E93_16555 NZ_PYJV01000090.1 Protein Homology CDS 65992 66945 . - 0 ID=cds-WP_000569786.1;Parent=gene-C9E93_RS16135;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9E93_RS16135;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 67181 69445 . + . ID=gene-C9E93_RS16140;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=C9E93_RS16140;old_locus_tag=C9E93_16560 NZ_PYJV01000090.1 Protein Homology CDS 67181 69445 . + 0 ID=cds-WP_000154195.1;Parent=gene-C9E93_RS16140;Dbxref=GenBank:WP_000154195.1;Name=WP_000154195.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9E93_RS16140;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154195.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 69780 71123 . + . ID=gene-C9E93_RS16150;Name=C9E93_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16150;old_locus_tag=C9E93_16565 NZ_PYJV01000090.1 Protein Homology CDS 69780 71123 . + 0 ID=cds-WP_000017947.1;Parent=gene-C9E93_RS16150;Dbxref=GenBank:WP_000017947.1;Name=WP_000017947.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9E93_RS16150;product=anaerobic sulfatase maturase;protein_id=WP_000017947.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 71203 72015 . - . ID=gene-C9E93_RS16155;Name=C9E93_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16155;old_locus_tag=C9E93_16570 NZ_PYJV01000090.1 Protein Homology CDS 71203 72015 . - 0 ID=cds-WP_000213959.1;Parent=gene-C9E93_RS16155;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9E93_RS16155;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 72274 73035 . + . ID=gene-C9E93_RS16160;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9E93_RS16160;old_locus_tag=C9E93_16575 NZ_PYJV01000090.1 Protein Homology CDS 72274 73035 . + 0 ID=cds-WP_000045169.1;Parent=gene-C9E93_RS16160;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9E93_RS16160;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 73175 74605 . + . ID=gene-C9E93_RS16165;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9E93_RS16165;old_locus_tag=C9E93_16580 NZ_PYJV01000090.1 Protein Homology CDS 73175 74605 . + 0 ID=cds-WP_000355562.1;Parent=gene-C9E93_RS16165;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9E93_RS16165;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 74701 75456 . + . ID=gene-C9E93_RS16170;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9E93_RS16170;old_locus_tag=C9E93_16585 NZ_PYJV01000090.1 Protein Homology CDS 74701 75456 . + 0 ID=cds-WP_000229009.1;Parent=gene-C9E93_RS16170;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9E93_RS16170;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 75466 76071 . + . ID=gene-C9E93_RS16175;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9E93_RS16175;old_locus_tag=C9E93_16590 NZ_PYJV01000090.1 Protein Homology CDS 75466 76071 . + 0 ID=cds-WP_001116090.1;Parent=gene-C9E93_RS16175;Dbxref=GenBank:WP_001116090.1;Name=WP_001116090.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9E93_RS16175;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116090.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 76068 77708 . + . ID=gene-C9E93_RS16180;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9E93_RS16180;old_locus_tag=C9E93_16595 NZ_PYJV01000090.1 Protein Homology CDS 76068 77708 . + 0 ID=cds-WP_000187559.1;Parent=gene-C9E93_RS16180;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9E93_RS16180;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 77914 78168 . + . ID=gene-C9E93_RS16185;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9E93_RS16185;old_locus_tag=C9E93_16600 NZ_PYJV01000090.1 Protein Homology CDS 77914 78168 . + 0 ID=cds-WP_000508972.1;Parent=gene-C9E93_RS16185;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9E93_RS16185;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 78172 78720 . + . ID=gene-C9E93_RS16190;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9E93_RS16190;old_locus_tag=C9E93_16605 NZ_PYJV01000090.1 Protein Homology CDS 78172 78720 . + 0 ID=cds-WP_000459612.1;Parent=gene-C9E93_RS16190;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9E93_RS16190;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 78723 79502 . + . ID=gene-C9E93_RS16195;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9E93_RS16195;old_locus_tag=C9E93_16610 NZ_PYJV01000090.1 Protein Homology CDS 78723 79502 . + 0 ID=cds-WP_000257554.1;Parent=gene-C9E93_RS16195;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9E93_RS16195;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 79544 80326 . + . ID=gene-C9E93_RS16200;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9E93_RS16200;old_locus_tag=C9E93_16615 NZ_PYJV01000090.1 Protein Homology CDS 79544 80326 . + 0 ID=cds-WP_000459637.1;Parent=gene-C9E93_RS16200;Dbxref=GenBank:WP_000459637.1;Name=WP_000459637.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9E93_RS16200;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459637.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 80334 80822 . - . ID=gene-C9E93_RS16205;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9E93_RS16205;old_locus_tag=C9E93_16620 NZ_PYJV01000090.1 Protein Homology CDS 80334 80822 . - 0 ID=cds-WP_001192410.1;Parent=gene-C9E93_RS16205;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9E93_RS16205;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 81008 82486 . + . ID=gene-C9E93_RS16210;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9E93_RS16210;old_locus_tag=C9E93_16625 NZ_PYJV01000090.1 Protein Homology CDS 81008 82486 . + 0 ID=cds-WP_000339764.1;Parent=gene-C9E93_RS16210;Dbxref=GenBank:WP_000339764.1;Name=WP_000339764.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9E93_RS16210;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339764.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 82572 83273 . + . ID=gene-C9E93_RS16215;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9E93_RS16215;old_locus_tag=C9E93_16630 NZ_PYJV01000090.1 Protein Homology CDS 82572 83273 . + 0 ID=cds-WP_000209838.1;Parent=gene-C9E93_RS16215;Dbxref=GenBank:WP_000209838.1;Name=WP_000209838.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9E93_RS16215;product=NAD(P)H-flavin reductase;protein_id=WP_000209838.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 83527 85350 . + . ID=gene-C9E93_RS16220;Name=C9E93_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16220;old_locus_tag=C9E93_16635 NZ_PYJV01000090.1 Protein Homology CDS 83527 85350 . + 0 ID=cds-WP_000669887.1;Parent=gene-C9E93_RS16220;Dbxref=GenBank:WP_000669887.1;Name=WP_000669887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9E93_RS16220;product=aryl-sulfate sulfotransferase;protein_id=WP_000669887.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 85547 86710 . - . ID=gene-C9E93_RS16225;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9E93_RS16225;old_locus_tag=C9E93_16640 NZ_PYJV01000090.1 Protein Homology CDS 85547 86710 . - 0 ID=cds-WP_000438783.1;Parent=gene-C9E93_RS16225;Dbxref=GenBank:WP_000438783.1;Name=WP_000438783.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9E93_RS16225;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438783.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 86720 88909 . - . ID=gene-C9E93_RS16230;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9E93_RS16230;old_locus_tag=C9E93_16645 NZ_PYJV01000090.1 Protein Homology CDS 86720 88909 . - 0 ID=cds-WP_000966001.1;Parent=gene-C9E93_RS16230;Dbxref=GenBank:WP_000966001.1;Name=WP_000966001.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9E93_RS16230;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966001.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 89099 90430 . + . ID=gene-C9E93_RS16235;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9E93_RS16235;old_locus_tag=C9E93_16650 NZ_PYJV01000090.1 Protein Homology CDS 89099 90430 . + 0 ID=cds-WP_135370023.1;Parent=gene-C9E93_RS16235;Dbxref=GenBank:WP_135370023.1;Name=WP_135370023.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9E93_RS16235;product=Xaa-Pro dipeptidase;protein_id=WP_135370023.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 90430 91044 . + . ID=gene-C9E93_RS16240;Name=C9E93_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16240;old_locus_tag=C9E93_16655 NZ_PYJV01000090.1 Protein Homology CDS 90430 91044 . + 0 ID=cds-WP_079958431.1;Parent=gene-C9E93_RS16240;Dbxref=GenBank:WP_079958431.1;Name=WP_079958431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9E93_RS16240;product=IMPACT family protein;protein_id=WP_079958431.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 91083 92534 . + . ID=gene-C9E93_RS16245;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9E93_RS16245;old_locus_tag=C9E93_16660 NZ_PYJV01000090.1 Protein Homology CDS 91083 92534 . + 0 ID=cds-WP_000545688.1;Parent=gene-C9E93_RS16245;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9E93_RS16245;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_PYJV01000090.1 RefSeq gene 92546 93091 . + . ID=gene-C9E93_RS16250;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9E93_RS16250;old_locus_tag=C9E93_16665 NZ_PYJV01000090.1 Protein Homology CDS 92546 93091 . + 0 ID=cds-WP_000853982.1;Parent=gene-C9E93_RS16250;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9E93_RS16250;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 ##sequence-region NZ_PYJV01000069.1 1 92032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000069.1 RefSeq region 1 92032 . + . ID=NZ_PYJV01000069.1:1..92032;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000069.1 RefSeq gene 1 238 . + . ID=gene-C9E93_RS23735;Name=C9E93_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23735;partial=true;start_range=.,1 NZ_PYJV01000069.1 GeneMarkS-2+ CDS 1 238 . + 1 ID=cds-WP_217810211.1;Parent=gene-C9E93_RS23735;Dbxref=GenBank:WP_217810211.1;Name=WP_217810211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23735;partial=true;product=hypothetical protein;protein_id=WP_217810211.1;start_range=.,1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 303 1034 . - . ID=gene-C9E93_RS10935;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9E93_RS10935;old_locus_tag=C9E93_11215 NZ_PYJV01000069.1 Protein Homology CDS 303 1034 . - 0 ID=cds-WP_001080048.1;Parent=gene-C9E93_RS10935;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9E93_RS10935;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 1161 1496 . + . ID=gene-C9E93_RS10940;Name=C9E93_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10940;old_locus_tag=C9E93_11220 NZ_PYJV01000069.1 Protein Homology CDS 1161 1496 . + 0 ID=cds-WP_000524877.1;Parent=gene-C9E93_RS10940;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9E93_RS10940;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 1558 2940 . - . ID=gene-C9E93_RS10945;Name=C9E93_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10945;old_locus_tag=C9E93_11225 NZ_PYJV01000069.1 Protein Homology CDS 1558 2940 . - 0 ID=cds-WP_000412353.1;Parent=gene-C9E93_RS10945;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9E93_RS10945;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 3239 4183 . - . ID=gene-C9E93_RS10950;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9E93_RS10950;old_locus_tag=C9E93_11230 NZ_PYJV01000069.1 Protein Homology CDS 3239 4183 . - 0 ID=cds-WP_000769294.1;Parent=gene-C9E93_RS10950;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9E93_RS10950;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 4710 6239 . + . ID=gene-C9E93_RS10955;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9E93_RS10955;old_locus_tag=C9E93_11235 NZ_PYJV01000069.1 Protein Homology CDS 4710 6239 . + 0 ID=cds-WP_001219360.1;Parent=gene-C9E93_RS10955;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9E93_RS10955;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 6250 7638 . + . ID=gene-C9E93_RS10960;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9E93_RS10960;old_locus_tag=C9E93_11240 NZ_PYJV01000069.1 Protein Homology CDS 6250 7638 . + 0 ID=cds-WP_000014056.1;Parent=gene-C9E93_RS10960;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9E93_RS10960;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 7813 8847 . - . ID=gene-C9E93_RS10965;Name=C9E93_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10965;old_locus_tag=C9E93_11245 NZ_PYJV01000069.1 Protein Homology CDS 7813 8847 . - 0 ID=cds-WP_001118268.1;Parent=gene-C9E93_RS10965;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9E93_RS10965;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 8983 9153 . + . ID=gene-C9E93_RS24190;Name=C9E93_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24190;old_locus_tag=C9E93_11250 NZ_PYJV01000069.1 Protein Homology CDS 8983 9153 . + 0 ID=cds-WP_001539987.1;Parent=gene-C9E93_RS24190;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=C9E93_RS24190;product=protein YdgV;protein_id=WP_001539987.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 9265 9627 . + . ID=gene-C9E93_RS10975;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9E93_RS10975;old_locus_tag=C9E93_11255 NZ_PYJV01000069.1 Protein Homology CDS 9265 9627 . + 0 ID=cds-WP_000500278.1;Parent=gene-C9E93_RS10975;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9E93_RS10975;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 9614 9943 . + . ID=gene-C9E93_RS10980;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9E93_RS10980;old_locus_tag=C9E93_11260 NZ_PYJV01000069.1 Protein Homology CDS 9614 9943 . + 0 ID=cds-WP_001183821.1;Parent=gene-C9E93_RS10980;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=C9E93_RS10980;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 9978 10799 . - . ID=gene-C9E93_RS10985;Name=C9E93_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10985;old_locus_tag=C9E93_11265 NZ_PYJV01000069.1 Protein Homology CDS 9978 10799 . - 0 ID=cds-WP_000549641.1;Parent=gene-C9E93_RS10985;Dbxref=GenBank:WP_000549641.1;Name=WP_000549641.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9E93_RS10985;product=trypsin-like serine peptidase;protein_id=WP_000549641.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 11068 11319 . - . ID=gene-C9E93_RS10990;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9E93_RS10990;old_locus_tag=C9E93_11270 NZ_PYJV01000069.1 Protein Homology CDS 11068 11319 . - 0 ID=cds-WP_001766314.1;Parent=gene-C9E93_RS10990;Dbxref=GenBank:WP_001766314.1;Name=WP_001766314.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=C9E93_RS10990;product=acid resistance repetitive basic protein Asr;protein_id=WP_001766314.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 11555 11647 . + . ID=gene-C9E93_RS23740;Name=C9E93_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23740 NZ_PYJV01000069.1 Protein Homology CDS 11555 11647 . + 0 ID=cds-WP_001068154.1;Parent=gene-C9E93_RS23740;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9E93_RS23740;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 11714 12967 . - . ID=gene-C9E93_RS10995;Name=C9E93_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10995;old_locus_tag=C9E93_11275 NZ_PYJV01000069.1 Protein Homology CDS 11714 12967 . - 0 ID=cds-WP_000091792.1;Parent=gene-C9E93_RS10995;Dbxref=GenBank:WP_000091792.1;Name=WP_000091792.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9E93_RS10995;product=MFS transporter;protein_id=WP_000091792.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 13087 13986 . + . ID=gene-C9E93_RS11000;Name=C9E93_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11000;old_locus_tag=C9E93_11280 NZ_PYJV01000069.1 Protein Homology CDS 13087 13986 . + 0 ID=cds-WP_086801278.1;Parent=gene-C9E93_RS11000;Dbxref=GenBank:WP_086801278.1;Name=WP_086801278.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9E93_RS11000;product=LysR family transcriptional regulator;protein_id=WP_086801278.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 14114 15334 . + . ID=gene-C9E93_RS11005;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=C9E93_RS11005;old_locus_tag=C9E93_11290 NZ_PYJV01000069.1 Protein Homology CDS 14114 15334 . + 0 ID=cds-WP_000225095.1;Parent=gene-C9E93_RS11005;Dbxref=GenBank:WP_000225095.1;Name=WP_000225095.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9E93_RS11005;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225095.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 15460 16155 . + . ID=gene-C9E93_RS11010;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E93_RS11010;old_locus_tag=C9E93_11295 NZ_PYJV01000069.1 Protein Homology CDS 15460 16155 . + 0 ID=cds-WP_000919206.1;Parent=gene-C9E93_RS11010;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9E93_RS11010;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 16111 17400 . - . ID=gene-C9E93_RS11015;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9E93_RS11015;old_locus_tag=C9E93_11300 NZ_PYJV01000069.1 Protein Homology CDS 16111 17400 . - 0 ID=cds-WP_000554906.1;Parent=gene-C9E93_RS11015;Dbxref=GenBank:WP_000554906.1;Name=WP_000554906.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9E93_RS11015;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554906.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 17536 18684 . - . ID=gene-C9E93_RS11020;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9E93_RS11020;old_locus_tag=C9E93_11305 NZ_PYJV01000069.1 Protein Homology CDS 17536 18684 . - 0 ID=cds-WP_000593093.1;Parent=gene-C9E93_RS11020;Dbxref=GenBank:WP_000593093.1;Name=WP_000593093.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9E93_RS11020;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593093.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 18684 19331 . - . ID=gene-C9E93_RS11025;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9E93_RS11025;old_locus_tag=C9E93_11310 NZ_PYJV01000069.1 Protein Homology CDS 18684 19331 . - 0 ID=cds-WP_000379677.1;Parent=gene-C9E93_RS11025;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9E93_RS11025;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 19341 20243 . - . ID=gene-C9E93_RS11030;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9E93_RS11030;old_locus_tag=C9E93_11315 NZ_PYJV01000069.1 Protein Homology CDS 19341 20243 . - 0 ID=cds-WP_001211193.1;Parent=gene-C9E93_RS11030;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9E93_RS11030;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 20272 20982 . - . ID=gene-C9E93_RS11035;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E93_RS11035;old_locus_tag=C9E93_11320 NZ_PYJV01000069.1 Protein Homology CDS 20272 20982 . - 0 ID=cds-WP_000556891.1;Parent=gene-C9E93_RS11035;Dbxref=GenBank:WP_000556891.1;Name=WP_000556891.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9E93_RS11035;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000556891.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 21287 21901 . - . ID=gene-C9E93_RS11040;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9E93_RS11040;old_locus_tag=C9E93_11325 NZ_PYJV01000069.1 Protein Homology CDS 21287 21901 . - 0 ID=cds-WP_135370135.1;Parent=gene-C9E93_RS11040;Dbxref=GenBank:WP_135370135.1;Name=WP_135370135.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9E93_RS11040;product=Tat proofreading chaperone DmsD;protein_id=WP_135370135.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 21944 22801 . - . ID=gene-C9E93_RS11045;Name=C9E93_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11045;old_locus_tag=C9E93_11330 NZ_PYJV01000069.1 Protein Homology CDS 21944 22801 . - 0 ID=cds-WP_000534704.1;Parent=gene-C9E93_RS11045;Dbxref=GenBank:WP_000534704.1;Name=WP_000534704.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9E93_RS11045;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534704.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 22803 23420 . - . ID=gene-C9E93_RS11050;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E93_RS11050;old_locus_tag=C9E93_11335 NZ_PYJV01000069.1 Protein Homology CDS 22803 23420 . - 0 ID=cds-WP_000213069.1;Parent=gene-C9E93_RS11050;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E93_RS11050;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 23431 25866 . - . ID=gene-C9E93_RS11055;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=C9E93_RS11055;old_locus_tag=C9E93_11340 NZ_PYJV01000069.1 Protein Homology CDS 23431 25866 . - 0 ID=cds-WP_135370357.1;Parent=gene-C9E93_RS11055;Dbxref=GenBank:WP_135370357.1;Name=WP_135370357.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9E93_RS11055;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_135370357.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 25965 28403 . - . ID=gene-C9E93_RS11060;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=C9E93_RS11060;old_locus_tag=C9E93_11345 NZ_PYJV01000069.1 Protein Homology CDS 25965 28403 . - 0 ID=cds-WP_076735658.1;Parent=gene-C9E93_RS11060;Dbxref=GenBank:WP_076735658.1;Name=WP_076735658.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=C9E93_RS11060;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_076735658.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 28560 28868 . - . ID=gene-C9E93_RS11065;Name=C9E93_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11065;old_locus_tag=C9E93_11350 NZ_PYJV01000069.1 Protein Homology CDS 28560 28868 . - 0 ID=cds-WP_000975516.1;Parent=gene-C9E93_RS11065;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9E93_RS11065;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 28972 29682 . + . ID=gene-C9E93_RS11070;Name=C9E93_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11070;old_locus_tag=C9E93_11355 NZ_PYJV01000069.1 Protein Homology CDS 28972 29682 . + 0 ID=cds-WP_000743122.1;Parent=gene-C9E93_RS11070;Dbxref=GenBank:WP_000743122.1;Name=WP_000743122.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9E93_RS11070;product=YnfC family lipoprotein;protein_id=WP_000743122.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 29723 30283 . - . ID=gene-C9E93_RS11075;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9E93_RS11075;old_locus_tag=C9E93_11360 NZ_PYJV01000069.1 Protein Homology CDS 29723 30283 . - 0 ID=cds-WP_000199997.1;Parent=gene-C9E93_RS11075;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9E93_RS11075;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 30319 30660 . - . ID=gene-C9E93_RS11080;Name=C9E93_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11080;old_locus_tag=C9E93_11365 NZ_PYJV01000069.1 Protein Homology CDS 30319 30660 . - 0 ID=cds-WP_001066440.1;Parent=gene-C9E93_RS11080;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9E93_RS11080;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 30812 31138 . + . ID=gene-C9E93_RS11085;Name=C9E93_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11085;old_locus_tag=C9E93_11370 NZ_PYJV01000069.1 Protein Homology CDS 30812 31138 . + 0 ID=cds-WP_000921382.1;Parent=gene-C9E93_RS11085;Dbxref=GenBank:WP_000921382.1;Name=WP_000921382.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9E93_RS11085;product=YnfA family protein;protein_id=WP_000921382.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 31260 32474 . + . ID=gene-C9E93_RS11090;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9E93_RS11090;old_locus_tag=C9E93_11375 NZ_PYJV01000069.1 Protein Homology CDS 31260 32474 . + 0 ID=cds-WP_000706269.1;Parent=gene-C9E93_RS11090;Dbxref=GenBank:WP_000706269.1;Name=WP_000706269.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9E93_RS11090;product=starvation-sensing protein RspA;protein_id=WP_000706269.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 32485 33504 . + . ID=gene-C9E93_RS11095;Name=C9E93_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11095;old_locus_tag=C9E93_11380 NZ_PYJV01000069.1 Protein Homology CDS 32485 33504 . + 0 ID=cds-WP_023206416.1;Parent=gene-C9E93_RS11095;Dbxref=GenBank:WP_023206416.1;Name=WP_023206416.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9E93_RS11095;product=Zn-dependent oxidoreductase;protein_id=WP_023206416.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 33558 34937 . + . ID=gene-C9E93_RS11100;Name=C9E93_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11100;old_locus_tag=C9E93_11385 NZ_PYJV01000069.1 Protein Homology CDS 33558 34937 . + 0 ID=cds-WP_135370042.1;Parent=gene-C9E93_RS11100;Dbxref=GenBank:WP_135370042.1;Name=WP_135370042.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9E93_RS11100;product=MFS transporter;protein_id=WP_135370042.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 35081 36547 . + . ID=gene-C9E93_RS11105;Name=C9E93_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11105;old_locus_tag=C9E93_11390 NZ_PYJV01000069.1 Protein Homology CDS 35081 36547 . + 0 ID=cds-WP_135370043.1;Parent=gene-C9E93_RS11105;Dbxref=GenBank:WP_135370043.1;Name=WP_135370043.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9E93_RS11105;product=mannitol dehydrogenase family protein;protein_id=WP_135370043.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 36614 36817 . - . ID=gene-C9E93_RS11110;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9E93_RS11110;old_locus_tag=C9E93_11395 NZ_PYJV01000069.1 Protein Homology CDS 36614 36817 . - 0 ID=cds-WP_000989267.1;Parent=gene-C9E93_RS11110;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9E93_RS11110;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 36998 37684 . - . ID=gene-C9E93_RS11115;Name=C9E93_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11115;old_locus_tag=C9E93_11400 NZ_PYJV01000069.1 Protein Homology CDS 36998 37684 . - 0 ID=cds-WP_000215563.1;Parent=gene-C9E93_RS11115;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9E93_RS11115;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 37814 38560 . - . ID=gene-C9E93_RS11120;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9E93_RS11120;old_locus_tag=C9E93_11405 NZ_PYJV01000069.1 Protein Homology CDS 37814 38560 . - 0 ID=cds-WP_000636564.1;Parent=gene-C9E93_RS11120;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9E93_RS11120;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 38699 40741 . + . ID=gene-C9E93_RS11125;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9E93_RS11125;old_locus_tag=C9E93_11410 NZ_PYJV01000069.1 Protein Homology CDS 38699 40741 . + 0 ID=cds-WP_000106261.1;Parent=gene-C9E93_RS11125;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9E93_RS11125;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 41085 41267 . + . ID=gene-C9E93_RS11130;Name=C9E93_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11130;old_locus_tag=C9E93_11415 NZ_PYJV01000069.1 Protein Homology CDS 41085 41267 . + 0 ID=cds-WP_000807642.1;Parent=gene-C9E93_RS11130;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9E93_RS11130;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 41387 41914 . - . ID=gene-C9E93_RS11135;Name=C9E93_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11135;old_locus_tag=C9E93_11420 NZ_PYJV01000069.1 Protein Homology CDS 41387 41914 . - 0 ID=cds-WP_001235357.1;Parent=gene-C9E93_RS11135;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9E93_RS11135;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 42297 42689 . + . ID=gene-C9E93_RS11140;Name=C9E93_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11140;old_locus_tag=C9E93_11425 NZ_PYJV01000069.1 Protein Homology CDS 42297 42689 . + 0 ID=cds-WP_000776351.1;Parent=gene-C9E93_RS11140;Dbxref=GenBank:WP_000776351.1;Name=WP_000776351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9E93_RS11140;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776351.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 43036 43131 . - . ID=gene-C9E93_RS11150;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9E93_RS11150;old_locus_tag=C9E93_11435 NZ_PYJV01000069.1 Protein Homology CDS 43036 43131 . - 0 ID=cds-WP_000901531.1;Parent=gene-C9E93_RS11150;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9E93_RS11150;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 43379 44566 . - . ID=gene-C9E93_RS11155;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=C9E93_RS11155;old_locus_tag=C9E93_11440 NZ_PYJV01000069.1 Protein Homology CDS 43379 44566 . - 0 ID=cds-WP_001068056.1;Parent=gene-C9E93_RS11155;Dbxref=GenBank:WP_001068056.1;Name=WP_001068056.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9E93_RS11155;product=efflux MFS transporter YdeE;protein_id=WP_001068056.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 44794 45696 . + . ID=gene-C9E93_RS11160;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9E93_RS11160;old_locus_tag=C9E93_11445 NZ_PYJV01000069.1 Protein Homology CDS 44794 45696 . + 0 ID=cds-WP_135370044.1;Parent=gene-C9E93_RS11160;Dbxref=GenBank:WP_135370044.1;Name=WP_135370044.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9E93_RS11160;product=O-acetylserine/cysteine exporter;protein_id=WP_135370044.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 45815 46030 . - . ID=gene-C9E93_RS11165;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9E93_RS11165;old_locus_tag=C9E93_11450 NZ_PYJV01000069.1 Protein Homology CDS 45815 46030 . - 0 ID=cds-WP_000783049.1;Parent=gene-C9E93_RS11165;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9E93_RS11165;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 46059 46442 . - . ID=gene-C9E93_RS11170;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9E93_RS11170;old_locus_tag=C9E93_11455 NZ_PYJV01000069.1 Protein Homology CDS 46059 46442 . - 0 ID=cds-WP_000091194.1;Parent=gene-C9E93_RS11170;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9E93_RS11170;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 46462 46896 . - . ID=gene-C9E93_RS11175;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9E93_RS11175;old_locus_tag=C9E93_11460 NZ_PYJV01000069.1 Protein Homology CDS 46462 46896 . - 0 ID=cds-WP_000843434.1;Parent=gene-C9E93_RS11175;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9E93_RS11175;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 47155 47820 . + . ID=gene-C9E93_RS11180;Name=C9E93_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11180;old_locus_tag=C9E93_11465 NZ_PYJV01000069.1 Protein Homology CDS 47155 47820 . + 0 ID=cds-WP_000968968.1;Parent=gene-C9E93_RS11180;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9E93_RS11180;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 47867 49057 . - . ID=gene-C9E93_RS11185;Name=C9E93_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11185;old_locus_tag=C9E93_11470 NZ_PYJV01000069.1 Protein Homology CDS 47867 49057 . - 0 ID=cds-WP_085375785.1;Parent=gene-C9E93_RS11185;Dbxref=GenBank:WP_085375785.1;Name=WP_085375785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9E93_RS11185;product=sugar transporter;protein_id=WP_085375785.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 49173 50045 . - . ID=gene-C9E93_RS11195;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=C9E93_RS11195;old_locus_tag=C9E93_11480 NZ_PYJV01000069.1 Protein Homology CDS 49173 50045 . - 0 ID=cds-WP_135370045.1;Parent=gene-C9E93_RS11195;Dbxref=GenBank:WP_135370045.1;Name=WP_135370045.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9E93_RS11195;product=putrescine utilization regulator PtrR;protein_id=WP_135370045.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 50148 51536 . + . ID=gene-C9E93_RS11200;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=C9E93_RS11200;old_locus_tag=C9E93_11485 NZ_PYJV01000069.1 Protein Homology CDS 50148 51536 . + 0 ID=cds-WP_000178409.1;Parent=gene-C9E93_RS11200;Dbxref=GenBank:WP_000178409.1;Name=WP_000178409.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9E93_RS11200;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178409.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 51609 52535 . + . ID=gene-C9E93_RS11205;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9E93_RS11205;old_locus_tag=C9E93_11490 NZ_PYJV01000069.1 Protein Homology CDS 51609 52535 . + 0 ID=cds-WP_135370046.1;Parent=gene-C9E93_RS11205;Dbxref=GenBank:WP_135370046.1;Name=WP_135370046.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9E93_RS11205;product=glutaminase B;protein_id=WP_135370046.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 52535 52894 . + . ID=gene-C9E93_RS11210;Name=C9E93_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11210;old_locus_tag=C9E93_11495 NZ_PYJV01000069.1 Protein Homology CDS 52535 52894 . + 0 ID=cds-WP_000992451.1;Parent=gene-C9E93_RS11210;Dbxref=GenBank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9E93_RS11210;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 53149 54063 . + . ID=gene-C9E93_RS11215;Name=C9E93_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11215;old_locus_tag=C9E93_11500 NZ_PYJV01000069.1 Protein Homology CDS 53149 54063 . + 0 ID=cds-WP_001670736.1;Parent=gene-C9E93_RS11215;Dbxref=GenBank:WP_001670736.1;Name=WP_001670736.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=C9E93_RS11215;product=bestrophin family protein;protein_id=WP_001670736.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 54119 54661 . - . ID=gene-C9E93_RS11220;Name=C9E93_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11220;old_locus_tag=C9E93_11505 NZ_PYJV01000069.1 Protein Homology CDS 54119 54661 . - 0 ID=cds-WP_023244063.1;Parent=gene-C9E93_RS11220;Dbxref=GenBank:WP_023244063.1;Name=WP_023244063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9E93_RS11220;product=YybH family protein;protein_id=WP_023244063.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 55378 56496 . + . ID=gene-C9E93_RS11225;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9E93_RS11225;old_locus_tag=C9E93_11510 NZ_PYJV01000069.1 Protein Homology CDS 55378 56496 . + 0 ID=cds-WP_000758335.1;Parent=gene-C9E93_RS11225;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9E93_RS11225;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 56637 56978 . - . ID=gene-C9E93_RS11230;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E93_RS11230;old_locus_tag=C9E93_11515 NZ_PYJV01000069.1 Protein Homology CDS 56637 56978 . - 0 ID=cds-WP_000544776.1;Parent=gene-C9E93_RS11230;Dbxref=GenBank:WP_000544776.1;Name=WP_000544776.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9E93_RS11230;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544776.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 56991 57878 . - . ID=gene-C9E93_RS11235;Name=C9E93_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11235;old_locus_tag=C9E93_11520 NZ_PYJV01000069.1 Protein Homology CDS 56991 57878 . - 0 ID=cds-WP_135370589.1;Parent=gene-C9E93_RS11235;Dbxref=GenBank:WP_135370589.1;Name=WP_135370589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9E93_RS11235;product=ATP/GTP-binding protein;protein_id=WP_135370589.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 57866 58927 . - . ID=gene-C9E93_RS11240;Name=C9E93_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11240;old_locus_tag=C9E93_11525 NZ_PYJV01000069.1 Protein Homology CDS 57866 58927 . - 0 ID=cds-WP_135370590.1;Parent=gene-C9E93_RS11240;Dbxref=GenBank:WP_135370590.1;Name=WP_135370590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9E93_RS11240;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_135370590.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 58945 59355 . - . ID=gene-C9E93_RS11245;Name=C9E93_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11245;old_locus_tag=C9E93_11530 NZ_PYJV01000069.1 Protein Homology CDS 58945 59355 . - 0 ID=cds-WP_000155986.1;Parent=gene-C9E93_RS11245;Dbxref=GenBank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9E93_RS11245;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 59352 59651 . - . ID=gene-C9E93_RS11250;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E93_RS11250;old_locus_tag=C9E93_11535 NZ_PYJV01000069.1 Protein Homology CDS 59352 59651 . - 0 ID=cds-WP_000334904.1;Parent=gene-C9E93_RS11250;Dbxref=GenBank:WP_000334904.1;Name=WP_000334904.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9E93_RS11250;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334904.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 59651 60259 . - . ID=gene-C9E93_RS11255;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9E93_RS11255;old_locus_tag=C9E93_11540 NZ_PYJV01000069.1 Protein Homology CDS 59651 60259 . - 0 ID=cds-WP_135370591.1;Parent=gene-C9E93_RS11255;Dbxref=GenBank:WP_135370591.1;Name=WP_135370591.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9E93_RS11255;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_135370591.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 60265 61008 . - . ID=gene-C9E93_RS11260;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9E93_RS11260;old_locus_tag=C9E93_11545 NZ_PYJV01000069.1 Protein Homology CDS 60265 61008 . - 0 ID=cds-WP_000924456.1;Parent=gene-C9E93_RS11260;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9E93_RS11260;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 60959 62761 . - . ID=gene-C9E93_RS11265;Name=C9E93_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11265;old_locus_tag=C9E93_11550 NZ_PYJV01000069.1 Protein Homology CDS 60959 62761 . - 0 ID=cds-WP_000331200.1;Parent=gene-C9E93_RS11265;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9E93_RS11265;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 62764 63867 . - . ID=gene-C9E93_RS11270;Name=C9E93_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11270;old_locus_tag=C9E93_11555 NZ_PYJV01000069.1 Protein Homology CDS 62764 63867 . - 0 ID=cds-WP_001194448.1;Parent=gene-C9E93_RS11270;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9E93_RS11270;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 64296 65387 . + . ID=gene-C9E93_RS11275;Name=C9E93_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11275;old_locus_tag=C9E93_11560 NZ_PYJV01000069.1 Protein Homology CDS 64296 65387 . + 0 ID=cds-WP_135370592.1;Parent=gene-C9E93_RS11275;Dbxref=GenBank:WP_135370592.1;Name=WP_135370592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9E93_RS11275;product=choloylglycine hydrolase family protein;protein_id=WP_135370592.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 65433 66224 . + . ID=gene-C9E93_RS11280;Name=C9E93_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11280;old_locus_tag=C9E93_11565 NZ_PYJV01000069.1 Protein Homology CDS 65433 66224 . + 0 ID=cds-WP_001518759.1;Parent=gene-C9E93_RS11280;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9E93_RS11280;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 66283 67308 . - . ID=gene-C9E93_RS11285;Name=C9E93_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11285;old_locus_tag=C9E93_11570 NZ_PYJV01000069.1 Protein Homology CDS 66283 67308 . - 0 ID=cds-WP_000864924.1;Parent=gene-C9E93_RS11285;Dbxref=GenBank:WP_000864924.1;Name=WP_000864924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9E93_RS11285;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864924.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 67283 68569 . - . ID=gene-C9E93_RS11290;Name=C9E93_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11290;old_locus_tag=C9E93_11575 NZ_PYJV01000069.1 Protein Homology CDS 67283 68569 . - 0 ID=cds-WP_000824240.1;Parent=gene-C9E93_RS11290;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9E93_RS11290;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 68746 70302 . - . ID=gene-C9E93_RS11295;Name=C9E93_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11295;old_locus_tag=C9E93_11580 NZ_PYJV01000069.1 Protein Homology CDS 68746 70302 . - 0 ID=cds-WP_135370593.1;Parent=gene-C9E93_RS11295;Dbxref=GenBank:WP_135370593.1;Name=WP_135370593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9E93_RS11295;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_135370593.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 70372 71613 . - . ID=gene-C9E93_RS11300;Name=C9E93_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11300;old_locus_tag=C9E93_11585 NZ_PYJV01000069.1 Protein Homology CDS 70372 71613 . - 0 ID=cds-WP_080217742.1;Parent=gene-C9E93_RS11300;Dbxref=GenBank:WP_080217742.1;Name=WP_080217742.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9E93_RS11300;product=MFS transporter;protein_id=WP_080217742.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 71603 73111 . - . ID=gene-C9E93_RS11305;Name=C9E93_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11305;old_locus_tag=C9E93_11590 NZ_PYJV01000069.1 Protein Homology CDS 71603 73111 . - 0 ID=cds-WP_135370594.1;Parent=gene-C9E93_RS11305;Dbxref=GenBank:WP_135370594.1;Name=WP_135370594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9E93_RS11305;product=FAD-dependent oxidoreductase;protein_id=WP_135370594.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 73156 73644 . + . ID=gene-C9E93_RS11310;Name=C9E93_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11310;old_locus_tag=C9E93_11595 NZ_PYJV01000069.1 Protein Homology CDS 73156 73644 . + 0 ID=cds-WP_001293637.1;Parent=gene-C9E93_RS11310;Dbxref=GenBank:WP_001293637.1;Name=WP_001293637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9E93_RS11310;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293637.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 73837 74916 . + . ID=gene-C9E93_RS11315;Name=C9E93_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11315;old_locus_tag=C9E93_11600 NZ_PYJV01000069.1 Protein Homology CDS 73837 74916 . + 0 ID=cds-WP_135400613.1;Parent=gene-C9E93_RS11315;Dbxref=GenBank:WP_135400613.1;Name=WP_135400613.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9E93_RS11315;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_135400613.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 74964 75353 . - . ID=gene-C9E93_RS11320;Name=C9E93_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11320;old_locus_tag=C9E93_11605 NZ_PYJV01000069.1 Protein Homology CDS 74964 75353 . - 0 ID=cds-WP_000194089.1;Parent=gene-C9E93_RS11320;Dbxref=GenBank:WP_000194089.1;Name=WP_000194089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9E93_RS11320;product=RidA family protein;protein_id=WP_000194089.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 75524 75808 . - . ID=gene-C9E93_RS11325;Name=C9E93_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11325;old_locus_tag=C9E93_11610 NZ_PYJV01000069.1 Protein Homology CDS 75524 75808 . - 0 ID=cds-WP_000221343.1;Parent=gene-C9E93_RS11325;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9E93_RS11325;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 75798 76046 . - . ID=gene-C9E93_RS11330;Name=C9E93_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11330;old_locus_tag=C9E93_11615 NZ_PYJV01000069.1 Protein Homology CDS 75798 76046 . - 0 ID=cds-WP_000885424.1;Parent=gene-C9E93_RS11330;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9E93_RS11330;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_PYJV01000069.1 RefSeq pseudogene 76311 76409 . + . ID=gene-C9E93_RS24080;Name=C9E93_RS24080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24080;partial=true;pseudo=true;start_range=.,76311 NZ_PYJV01000069.1 Protein Homology CDS 76311 76409 . + 0 ID=cds-C9E93_RS24080;Parent=gene-C9E93_RS24080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=C9E93_RS24080;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,76311;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 76403 76735 . + . ID=gene-C9E93_RS11340;Name=C9E93_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11340;old_locus_tag=C9E93_11625 NZ_PYJV01000069.1 Protein Homology CDS 76403 76735 . + 0 ID=cds-WP_000253154.1;Parent=gene-C9E93_RS11340;Dbxref=GenBank:WP_000253154.1;Name=WP_000253154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9E93_RS11340;product=DUF1493 family protein;protein_id=WP_000253154.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 76886 77794 . + . ID=gene-C9E93_RS11345;Name=C9E93_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11345;old_locus_tag=C9E93_11630 NZ_PYJV01000069.1 Protein Homology CDS 76886 77794 . + 0 ID=cds-WP_077912641.1;Parent=gene-C9E93_RS11345;Dbxref=GenBank:WP_077912641.1;Name=WP_077912641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460512.1;locus_tag=C9E93_RS11345;product=hypothetical protein;protein_id=WP_077912641.1;transl_table=11 NZ_PYJV01000069.1 RefSeq pseudogene 77796 78585 . - . ID=gene-C9E93_RS11350;Name=C9E93_RS11350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS11350;old_locus_tag=C9E93_11635;partial=true;pseudo=true;start_range=.,77796 NZ_PYJV01000069.1 Protein Homology CDS 77796 78585 . - 0 ID=cds-C9E93_RS11350;Parent=gene-C9E93_RS11350;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=C9E93_RS11350;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,77796;transl_table=11 NZ_PYJV01000069.1 RefSeq pseudogene 78925 79129 . - . ID=gene-C9E93_RS24085;Name=C9E93_RS24085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24085;old_locus_tag=C9E93_11645;pseudo=true NZ_PYJV01000069.1 Protein Homology CDS 78925 79129 . - 0 ID=cds-C9E93_RS24085;Parent=gene-C9E93_RS24085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276020.1;locus_tag=C9E93_RS24085;product=DUF29 family protein;pseudo=true;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 79530 80438 . + . ID=gene-C9E93_RS11365;Name=C9E93_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11365;old_locus_tag=C9E93_11650 NZ_PYJV01000069.1 Protein Homology CDS 79530 80438 . + 0 ID=cds-WP_023994284.1;Parent=gene-C9E93_RS11365;Dbxref=GenBank:WP_023994284.1;Name=WP_023994284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9E93_RS11365;product=LysR family transcriptional regulator;protein_id=WP_023994284.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 80612 81592 . + . ID=gene-C9E93_RS11370;Name=C9E93_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11370;old_locus_tag=C9E93_11655 NZ_PYJV01000069.1 Protein Homology CDS 80612 81592 . + 0 ID=cds-WP_135369924.1;Parent=gene-C9E93_RS11370;Dbxref=GenBank:WP_135369924.1;Name=WP_135369924.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=C9E93_RS11370;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_135369924.1;transl_table=11 NZ_PYJV01000069.1 RefSeq pseudogene 81779 81850 . + . ID=gene-C9E93_RS24195;Name=C9E93_RS24195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24195;partial=true;pseudo=true;start_range=.,81779 NZ_PYJV01000069.1 Protein Homology CDS 81779 81850 . + 0 ID=cds-C9E93_RS24195;Parent=gene-C9E93_RS24195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9E93_RS24195;partial=true;product=hypothetical protein;pseudo=true;start_range=.,81779;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 81863 83065 . + . ID=gene-C9E93_RS11375;Name=C9E93_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11375;old_locus_tag=C9E93_11660 NZ_PYJV01000069.1 Protein Homology CDS 81863 83065 . + 0 ID=cds-WP_135369923.1;Parent=gene-C9E93_RS11375;Dbxref=GenBank:WP_135369923.1;Name=WP_135369923.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9E93_RS11375;product=MalY/PatB family protein;protein_id=WP_135369923.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 83179 85254 . - . ID=gene-C9E93_RS11380;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E93_RS11380;old_locus_tag=C9E93_11665 NZ_PYJV01000069.1 Protein Homology CDS 83179 85254 . - 0 ID=cds-WP_135369922.1;Parent=gene-C9E93_RS11380;Dbxref=GenBank:WP_135369922.1;Name=WP_135369922.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9E93_RS11380;product=glycogen debranching protein GlgX;protein_id=WP_135369922.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 85311 87839 . - . ID=gene-C9E93_RS11385;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9E93_RS11385;old_locus_tag=C9E93_11670 NZ_PYJV01000069.1 Protein Homology CDS 85311 87839 . - 0 ID=cds-WP_135369921.1;Parent=gene-C9E93_RS11385;Dbxref=GenBank:WP_135369921.1;Name=WP_135369921.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9E93_RS11385;product=malto-oligosyltrehalose synthase;protein_id=WP_135369921.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 87836 89620 . - . ID=gene-C9E93_RS11390;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9E93_RS11390;old_locus_tag=C9E93_11675 NZ_PYJV01000069.1 Protein Homology CDS 87836 89620 . - 0 ID=cds-WP_000095541.1;Parent=gene-C9E93_RS11390;Dbxref=GenBank:WP_000095541.1;Name=WP_000095541.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9E93_RS11390;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_000095541.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 89749 90534 . - . ID=gene-C9E93_RS11395;Name=C9E93_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11395;old_locus_tag=C9E93_11680 NZ_PYJV01000069.1 Protein Homology CDS 89749 90534 . - 0 ID=cds-WP_000698599.1;Parent=gene-C9E93_RS11395;Dbxref=GenBank:WP_000698599.1;Name=WP_000698599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9E93_RS11395;product=OBAP family protein;protein_id=WP_000698599.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 90677 91006 . - . ID=gene-C9E93_RS11400;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9E93_RS11400;old_locus_tag=C9E93_11685 NZ_PYJV01000069.1 Protein Homology CDS 90677 91006 . - 0 ID=cds-WP_001032161.1;Parent=gene-C9E93_RS11400;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9E93_RS11400;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_PYJV01000069.1 RefSeq gene 91356 91787 . - . ID=gene-C9E93_RS11405;Name=C9E93_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11405;old_locus_tag=C9E93_11690 NZ_PYJV01000069.1 Protein Homology CDS 91356 91787 . - 0 ID=cds-WP_000152297.1;Parent=gene-C9E93_RS11405;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9E93_RS11405;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 ##sequence-region NZ_PYJV01000092.1 1 91667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000092.1 RefSeq region 1 91667 . + . ID=NZ_PYJV01000092.1:1..91667;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000092.1 RefSeq gene 156 1382 . + . ID=gene-C9E93_RS16260;Name=C9E93_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16260;old_locus_tag=C9E93_16675 NZ_PYJV01000092.1 Protein Homology CDS 156 1382 . + 0 ID=cds-WP_135370033.1;Parent=gene-C9E93_RS16260;Dbxref=GenBank:WP_135370033.1;Name=WP_135370033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9E93_RS16260;product=DUF3748 domain-containing protein;protein_id=WP_135370033.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 1384 1716 . - . ID=gene-C9E93_RS16265;Name=C9E93_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16265;old_locus_tag=C9E93_16680 NZ_PYJV01000092.1 Protein Homology CDS 1384 1716 . - 0 ID=cds-WP_001675643.1;Parent=gene-C9E93_RS16265;Dbxref=GenBank:WP_001675643.1;Name=WP_001675643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9E93_RS16265;product=YceK/YidQ family lipoprotein;protein_id=WP_001675643.1;transl_table=11 NZ_PYJV01000092.1 cmsearch sequence_feature 1959 2032 . + . ID=id-NZ_PYJV01000092.1:1959..2032;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000092.1 RefSeq gene 2026 2439 . + . ID=gene-C9E93_RS16270;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9E93_RS16270;old_locus_tag=C9E93_16685 NZ_PYJV01000092.1 Protein Homology CDS 2026 2439 . + 0 ID=cds-WP_001532742.1;Parent=gene-C9E93_RS16270;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9E93_RS16270;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 2549 2977 . + . ID=gene-C9E93_RS16275;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9E93_RS16275;old_locus_tag=C9E93_16690 NZ_PYJV01000092.1 Protein Homology CDS 2549 2977 . + 0 ID=cds-WP_001246919.1;Parent=gene-C9E93_RS16275;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9E93_RS16275;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 3166 4827 . + . ID=gene-C9E93_RS16280;Name=C9E93_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16280;old_locus_tag=C9E93_16695 NZ_PYJV01000092.1 Protein Homology CDS 3166 4827 . + 0 ID=cds-WP_001279781.1;Parent=gene-C9E93_RS16280;Dbxref=GenBank:WP_001279781.1;Name=WP_001279781.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9E93_RS16280;product=putative transporter;protein_id=WP_001279781.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 5271 5618 . + . ID=gene-C9E93_RS16285;Name=C9E93_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16285;old_locus_tag=C9E93_16700 NZ_PYJV01000092.1 Protein Homology CDS 5271 5618 . + 0 ID=cds-WP_000703964.1;Parent=gene-C9E93_RS16285;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9E93_RS16285;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 5608 5970 . + . ID=gene-C9E93_RS16290;Name=C9E93_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16290;old_locus_tag=C9E93_16705 NZ_PYJV01000092.1 Protein Homology CDS 5608 5970 . + 0 ID=cds-WP_001113454.1;Parent=gene-C9E93_RS16290;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9E93_RS16290;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 5967 6497 . + . ID=gene-C9E93_RS16295;Name=C9E93_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16295;old_locus_tag=C9E93_16710 NZ_PYJV01000092.1 Protein Homology CDS 5967 6497 . + 0 ID=cds-WP_000147830.1;Parent=gene-C9E93_RS16295;Dbxref=GenBank:WP_000147830.1;Name=WP_000147830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9E93_RS16295;product=radical SAM protein;protein_id=WP_000147830.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 6579 7901 . - . ID=gene-C9E93_RS16300;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9E93_RS16300;old_locus_tag=C9E93_16715 NZ_PYJV01000092.1 Protein Homology CDS 6579 7901 . - 0 ID=cds-WP_023217888.1;Parent=gene-C9E93_RS16300;Dbxref=GenBank:WP_023217888.1;Name=WP_023217888.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9E93_RS16300;product=D-serine ammonia-lyase;protein_id=WP_023217888.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 7919 9256 . - . ID=gene-C9E93_RS16305;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=C9E93_RS16305;old_locus_tag=C9E93_16720 NZ_PYJV01000092.1 Protein Homology CDS 7919 9256 . - 0 ID=cds-WP_000543314.1;Parent=gene-C9E93_RS16305;Dbxref=GenBank:WP_000543314.1;Name=WP_000543314.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9E93_RS16305;product=D-serine transporter DsdX;protein_id=WP_000543314.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 9482 10405 . + . ID=gene-C9E93_RS16310;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9E93_RS16310;old_locus_tag=C9E93_16725 NZ_PYJV01000092.1 Protein Homology CDS 9482 10405 . + 0 ID=cds-WP_001541637.1;Parent=gene-C9E93_RS16310;Dbxref=GenBank:WP_001541637.1;Name=WP_001541637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9E93_RS16310;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001541637.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 10469 11554 . + . ID=gene-C9E93_RS16315;Name=C9E93_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16315;old_locus_tag=C9E93_16730 NZ_PYJV01000092.1 Protein Homology CDS 10469 11554 . + 0 ID=cds-WP_135370034.1;Parent=gene-C9E93_RS16315;Dbxref=GenBank:WP_135370034.1;Name=WP_135370034.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9E93_RS16315;product=cellulase family glycosylhydrolase;protein_id=WP_135370034.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 11481 12665 . - . ID=gene-C9E93_RS16320;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9E93_RS16320;old_locus_tag=C9E93_16735 NZ_PYJV01000092.1 Protein Homology CDS 11481 12665 . - 0 ID=cds-WP_000828737.1;Parent=gene-C9E93_RS16320;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9E93_RS16320;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 12868 13728 . - . ID=gene-C9E93_RS16325;Name=C9E93_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16325;old_locus_tag=C9E93_16740 NZ_PYJV01000092.1 Protein Homology CDS 12868 13728 . - 0 ID=cds-WP_020437762.1;Parent=gene-C9E93_RS16325;Dbxref=GenBank:WP_020437762.1;Name=WP_020437762.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9E93_RS16325;product=DMT family transporter;protein_id=WP_020437762.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 13821 13910 . - . ID=gene-C9E93_RS16330;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9E93_RS16330;old_locus_tag=C9E93_16745 NZ_PYJV01000092.1 Protein Homology CDS 13821 13910 . - 0 ID=cds-WP_000117642.1;Parent=gene-C9E93_RS16330;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9E93_RS16330;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_PYJV01000092.1 RefSeq pseudogene 13907 14021 . - . ID=gene-C9E93_RS16335;Name=C9E93_RS16335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16335;old_locus_tag=C9E93_16750;pseudo=true NZ_PYJV01000092.1 Protein Homology CDS 13907 14021 . - 0 ID=cds-C9E93_RS16335;Parent=gene-C9E93_RS16335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9E93_RS16335;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 14544 14642 . + . ID=gene-C9E93_RS16340;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9E93_RS16340;old_locus_tag=C9E93_16760 NZ_PYJV01000092.1 Protein Homology CDS 14544 14642 . + 0 ID=cds-WP_001541152.1;Parent=gene-C9E93_RS16340;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9E93_RS16340;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 14749 16437 . + . ID=gene-C9E93_RS16345;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9E93_RS16345;old_locus_tag=C9E93_16765 NZ_PYJV01000092.1 Protein Homology CDS 14749 16437 . + 0 ID=cds-WP_000168439.1;Parent=gene-C9E93_RS16345;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9E93_RS16345;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 16441 16731 . + . ID=gene-C9E93_RS16350;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E93_RS16350;old_locus_tag=C9E93_16770 NZ_PYJV01000092.1 Protein Homology CDS 16441 16731 . + 0 ID=cds-WP_001171826.1;Parent=gene-C9E93_RS16350;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9E93_RS16350;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 16733 17518 . - . ID=gene-C9E93_RS16355;Name=C9E93_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16355;old_locus_tag=C9E93_16775 NZ_PYJV01000092.1 Protein Homology CDS 16733 17518 . - 0 ID=cds-WP_000448642.1;Parent=gene-C9E93_RS16355;Dbxref=GenBank:WP_000448642.1;Name=WP_000448642.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9E93_RS16355;product=DeoR family transcriptional regulator;protein_id=WP_000448642.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 17832 18752 . + . ID=gene-C9E93_RS16360;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E93_RS16360;old_locus_tag=C9E93_16780 NZ_PYJV01000092.1 Protein Homology CDS 17832 18752 . + 0 ID=cds-WP_023993455.1;Parent=gene-C9E93_RS16360;Dbxref=GenBank:WP_023993455.1;Name=WP_023993455.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9E93_RS16360;product=ribokinase;protein_id=WP_023993455.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 18783 20099 . + . ID=gene-C9E93_RS16365;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E93_RS16365;old_locus_tag=C9E93_16785 NZ_PYJV01000092.1 Protein Homology CDS 18783 20099 . + 0 ID=cds-WP_000998359.1;Parent=gene-C9E93_RS16365;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9E93_RS16365;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 20111 21124 . + . ID=gene-C9E93_RS16370;Name=C9E93_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16370;old_locus_tag=C9E93_16790 NZ_PYJV01000092.1 Protein Homology CDS 20111 21124 . + 0 ID=cds-WP_135369900.1;Parent=gene-C9E93_RS16370;Dbxref=GenBank:WP_135369900.1;Name=WP_135369900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9E93_RS16370;product=aldose 1-epimerase family protein;protein_id=WP_135369900.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 21199 21789 . + . ID=gene-C9E93_RS16375;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=C9E93_RS16375;old_locus_tag=C9E93_16795 NZ_PYJV01000092.1 Protein Homology CDS 21199 21789 . + 0 ID=cds-WP_000633672.1;Parent=gene-C9E93_RS16375;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9E93_RS16375;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 21789 23291 . + . ID=gene-C9E93_RS16380;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9E93_RS16380;old_locus_tag=C9E93_16800 NZ_PYJV01000092.1 Protein Homology CDS 21789 23291 . + 0 ID=cds-WP_135369901.1;Parent=gene-C9E93_RS16380;Dbxref=GenBank:WP_135369901.1;Name=WP_135369901.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9E93_RS16380;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_135369901.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 23301 24629 . + . ID=gene-C9E93_RS16385;Name=C9E93_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16385;old_locus_tag=C9E93_16805 NZ_PYJV01000092.1 Protein Homology CDS 23301 24629 . + 0 ID=cds-WP_000948164.1;Parent=gene-C9E93_RS16385;Dbxref=GenBank:WP_000948164.1;Name=WP_000948164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9E93_RS16385;product=MFS transporter;protein_id=WP_000948164.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 24772 26163 . + . ID=gene-C9E93_RS16390;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9E93_RS16390;old_locus_tag=C9E93_16810 NZ_PYJV01000092.1 Protein Homology CDS 24772 26163 . + 0 ID=cds-WP_000879181.1;Parent=gene-C9E93_RS16390;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9E93_RS16390;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 26356 26808 . + . ID=gene-C9E93_RS16395;Name=C9E93_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16395;old_locus_tag=C9E93_16815 NZ_PYJV01000092.1 Protein Homology CDS 26356 26808 . + 0 ID=cds-WP_001519640.1;Parent=gene-C9E93_RS16395;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9E93_RS16395;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 27161 27904 . + . ID=gene-C9E93_RS16400;Name=C9E93_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16400;old_locus_tag=C9E93_16820 NZ_PYJV01000092.1 Protein Homology CDS 27161 27904 . + 0 ID=cds-WP_000854956.1;Parent=gene-C9E93_RS16400;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9E93_RS16400;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 27922 28395 . + . ID=gene-C9E93_RS16405;Name=C9E93_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16405;old_locus_tag=C9E93_16825 NZ_PYJV01000092.1 Protein Homology CDS 27922 28395 . + 0 ID=cds-WP_001152237.1;Parent=gene-C9E93_RS16405;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9E93_RS16405;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 28392 28679 . + . ID=gene-C9E93_RS16410;Name=C9E93_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16410;old_locus_tag=C9E93_16830 NZ_PYJV01000092.1 Protein Homology CDS 28392 28679 . + 0 ID=cds-WP_000041396.1;Parent=gene-C9E93_RS16410;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9E93_RS16410;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 28755 30113 . + . ID=gene-C9E93_RS16415;Name=C9E93_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16415;old_locus_tag=C9E93_16835 NZ_PYJV01000092.1 Protein Homology CDS 28755 30113 . + 0 ID=cds-WP_000997825.1;Parent=gene-C9E93_RS16415;Dbxref=GenBank:WP_000997825.1;Name=WP_000997825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9E93_RS16415;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997825.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 30106 31590 . + . ID=gene-C9E93_RS16420;Name=C9E93_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16420;old_locus_tag=C9E93_16840 NZ_PYJV01000092.1 Protein Homology CDS 30106 31590 . + 0 ID=cds-WP_135369902.1;Parent=gene-C9E93_RS16420;Dbxref=GenBank:WP_135369902.1;Name=WP_135369902.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9E93_RS16420;product=FGGY-family carbohydrate kinase;protein_id=WP_135369902.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 31653 32513 . + . ID=gene-C9E93_RS16425;Name=C9E93_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16425;old_locus_tag=C9E93_16845 NZ_PYJV01000092.1 Protein Homology CDS 31653 32513 . + 0 ID=cds-WP_001131797.1;Parent=gene-C9E93_RS16425;Dbxref=GenBank:WP_001131797.1;Name=WP_001131797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9E93_RS16425;product=class II aldolase;protein_id=WP_001131797.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 32523 32792 . + . ID=gene-C9E93_RS16430;Name=C9E93_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16430;old_locus_tag=C9E93_16850 NZ_PYJV01000092.1 Protein Homology CDS 32523 32792 . + 0 ID=cds-WP_000621109.1;Parent=gene-C9E93_RS16430;Dbxref=GenBank:WP_000621109.1;Name=WP_000621109.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9E93_RS16430;product=HPr family phosphocarrier protein;protein_id=WP_000621109.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 32883 33206 . - . ID=gene-C9E93_RS16435;Name=C9E93_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16435;old_locus_tag=C9E93_16855 NZ_PYJV01000092.1 Protein Homology CDS 32883 33206 . - 0 ID=cds-WP_135369903.1;Parent=gene-C9E93_RS16435;Dbxref=GenBank:WP_135369903.1;Name=WP_135369903.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9E93_RS16435;product=helix-turn-helix domain-containing protein;protein_id=WP_135369903.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 33190 33549 . - . ID=gene-C9E93_RS16440;Name=C9E93_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16440;old_locus_tag=C9E93_16860 NZ_PYJV01000092.1 Protein Homology CDS 33190 33549 . - 0 ID=cds-WP_001217951.1;Parent=gene-C9E93_RS16440;Dbxref=GenBank:WP_001217951.1;Name=WP_001217951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9E93_RS16440;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217951.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 33765 34958 . + . ID=gene-C9E93_RS16445;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9E93_RS16445;old_locus_tag=C9E93_16865 NZ_PYJV01000092.1 Protein Homology CDS 33765 34958 . + 0 ID=cds-WP_001004798.1;Parent=gene-C9E93_RS16445;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9E93_RS16445;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 35018 36400 . - . ID=gene-C9E93_RS16450;Name=C9E93_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16450;old_locus_tag=C9E93_16870 NZ_PYJV01000092.1 Protein Homology CDS 35018 36400 . - 0 ID=cds-WP_001270479.1;Parent=gene-C9E93_RS16450;Dbxref=GenBank:WP_001270479.1;Name=WP_001270479.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9E93_RS16450;product=glycoside hydrolase family 1 protein;protein_id=WP_001270479.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 36506 36799 . - . ID=gene-C9E93_RS16455;Name=C9E93_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16455;old_locus_tag=C9E93_16875 NZ_PYJV01000092.1 Protein Homology CDS 36506 36799 . - 0 ID=cds-WP_000824212.1;Parent=gene-C9E93_RS16455;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9E93_RS16455;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_PYJV01000092.1 RefSeq pseudogene 36996 39376 . + . ID=gene-C9E93_RS16460;Name=C9E93_RS16460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16460;old_locus_tag=C9E93_16880;pseudo=true NZ_PYJV01000092.1 Protein Homology CDS 36996 39376 . + 0 ID=cds-C9E93_RS16460;Parent=gene-C9E93_RS16460;Note=frameshifted;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9E93_RS16460;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 39595 40020 . + . ID=gene-C9E93_RS16465;Name=C9E93_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16465;old_locus_tag=C9E93_16885 NZ_PYJV01000092.1 Protein Homology CDS 39595 40020 . + 0 ID=cds-WP_000214106.1;Parent=gene-C9E93_RS16465;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9E93_RS16465;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 40031 40516 . + . ID=gene-C9E93_RS16470;Name=C9E93_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16470;old_locus_tag=C9E93_16890 NZ_PYJV01000092.1 Protein Homology CDS 40031 40516 . + 0 ID=cds-WP_001284295.1;Parent=gene-C9E93_RS16470;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9E93_RS16470;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 40662 41411 . + . ID=gene-C9E93_RS16475;Name=C9E93_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16475;old_locus_tag=C9E93_16895 NZ_PYJV01000092.1 Protein Homology CDS 40662 41411 . + 0 ID=cds-WP_000380259.1;Parent=gene-C9E93_RS16475;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9E93_RS16475;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 41408 42268 . + . ID=gene-C9E93_RS16480;Name=C9E93_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16480;old_locus_tag=C9E93_16900 NZ_PYJV01000092.1 Protein Homology CDS 41408 42268 . + 0 ID=cds-WP_167851646.1;Parent=gene-C9E93_RS16480;Dbxref=GenBank:WP_167851646.1;Name=WP_167851646.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9E93_RS16480;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_167851646.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 42272 43381 . + . ID=gene-C9E93_RS16485;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9E93_RS16485;old_locus_tag=C9E93_16905 NZ_PYJV01000092.1 Protein Homology CDS 42272 43381 . + 0 ID=cds-WP_000188473.1;Parent=gene-C9E93_RS16485;Dbxref=GenBank:WP_000188473.1;Name=WP_000188473.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9E93_RS16485;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188473.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 43368 44111 . + . ID=gene-C9E93_RS16490;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E93_RS16490;old_locus_tag=C9E93_16910 NZ_PYJV01000092.1 Protein Homology CDS 43368 44111 . + 0 ID=cds-WP_001186140.1;Parent=gene-C9E93_RS16490;Dbxref=GenBank:WP_001186140.1;Name=WP_001186140.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9E93_RS16490;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186140.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 44347 45288 . + . ID=gene-C9E93_RS16495;Name=C9E93_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16495;old_locus_tag=C9E93_16915 NZ_PYJV01000092.1 Protein Homology CDS 44347 45288 . + 0 ID=cds-WP_000749540.1;Parent=gene-C9E93_RS16495;Dbxref=GenBank:WP_000749540.1;Name=WP_000749540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9E93_RS16495;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749540.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 45331 46233 . - . ID=gene-C9E93_RS16500;Name=C9E93_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16500;old_locus_tag=C9E93_16920 NZ_PYJV01000092.1 Protein Homology CDS 45331 46233 . - 0 ID=cds-WP_000535970.1;Parent=gene-C9E93_RS16500;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9E93_RS16500;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 46740 47435 . + . ID=gene-C9E93_RS16505;Name=C9E93_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16505;old_locus_tag=C9E93_16925 NZ_PYJV01000092.1 Protein Homology CDS 46740 47435 . + 0 ID=cds-WP_000392694.1;Parent=gene-C9E93_RS16505;Dbxref=GenBank:WP_000392694.1;Name=WP_000392694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9E93_RS16505;product=MgtC family protein;protein_id=WP_000392694.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 47655 50381 . + . ID=gene-C9E93_RS16510;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E93_RS16510;old_locus_tag=C9E93_16930 NZ_PYJV01000092.1 Protein Homology CDS 47655 50381 . + 0 ID=cds-WP_135369904.1;Parent=gene-C9E93_RS16510;Dbxref=GenBank:WP_135369904.1;Name=WP_135369904.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9E93_RS16510;product=magnesium-translocating P-type ATPase;protein_id=WP_135369904.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 50403 50495 . + . ID=gene-C9E93_RS16515;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9E93_RS16515;old_locus_tag=C9E93_16935 NZ_PYJV01000092.1 Protein Homology CDS 50403 50495 . + 0 ID=cds-WP_001082117.1;Parent=gene-C9E93_RS16515;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9E93_RS16515;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 50508 50594 . + . ID=gene-C9E93_RS23965;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9E93_RS23965 NZ_PYJV01000092.1 Protein Homology CDS 50508 50594 . + 0 ID=cds-WP_252515021.1;Parent=gene-C9E93_RS23965;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9E93_RS23965;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 50696 51175 . + . ID=gene-C9E93_RS16520;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9E93_RS16520;old_locus_tag=C9E93_16940 NZ_PYJV01000092.1 Protein Homology CDS 50696 51175 . + 0 ID=cds-WP_001065327.1;Parent=gene-C9E93_RS16520;Dbxref=GenBank:WP_001065327.1;Name=WP_001065327.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9E93_RS16520;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065327.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 51404 52084 . - . ID=gene-C9E93_RS16525;Name=C9E93_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16525;old_locus_tag=C9E93_16950 NZ_PYJV01000092.1 Protein Homology CDS 51404 52084 . - 0 ID=cds-WP_000106464.1;Parent=gene-C9E93_RS16525;Dbxref=GenBank:WP_000106464.1;Name=WP_000106464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=C9E93_RS16525;product=isochorismatase family protein;protein_id=WP_000106464.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 52868 53725 . + . ID=gene-C9E93_RS16535;Name=C9E93_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16535;old_locus_tag=C9E93_16960 NZ_PYJV01000092.1 Protein Homology CDS 52868 53725 . + 0 ID=cds-WP_135369910.1;Parent=gene-C9E93_RS16535;Dbxref=GenBank:WP_135369910.1;Name=WP_135369910.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9E93_RS16535;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369910.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 53736 54200 . + . ID=gene-C9E93_RS16540;Name=C9E93_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16540;old_locus_tag=C9E93_16965 NZ_PYJV01000092.1 Protein Homology CDS 53736 54200 . + 0 ID=cds-WP_023213975.1;Parent=gene-C9E93_RS16540;Dbxref=GenBank:WP_023213975.1;Name=WP_023213975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9E93_RS16540;product=hypothetical protein;protein_id=WP_023213975.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 54295 57162 . - . ID=gene-C9E93_RS16545;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9E93_RS16545;old_locus_tag=C9E93_16970 NZ_PYJV01000092.1 Protein Homology CDS 54295 57162 . - 0 ID=cds-WP_135369905.1;Parent=gene-C9E93_RS16545;Dbxref=GenBank:WP_135369905.1;Name=WP_135369905.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9E93_RS16545;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_135369905.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 57237 57854 . - . ID=gene-C9E93_RS16550;Name=C9E93_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16550;old_locus_tag=C9E93_16975 NZ_PYJV01000092.1 Protein Homology CDS 57237 57854 . - 0 ID=cds-WP_000984812.1;Parent=gene-C9E93_RS16550;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9E93_RS16550;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11 NZ_PYJV01000092.1 RefSeq pseudogene 59102 59441 . + . ID=gene-C9E93_RS16555;Name=C9E93_RS16555;end_range=59441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16555;old_locus_tag=C9E93_16980;partial=true;pseudo=true NZ_PYJV01000092.1 Protein Homology CDS 59102 59441 . + 0 ID=cds-C9E93_RS16555;Parent=gene-C9E93_RS16555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=59441,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=C9E93_RS16555;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 59477 59571 . - . ID=gene-C9E93_RS16560;Name=C9E93_RS16560;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS16560;old_locus_tag=C9E93_16985 NZ_PYJV01000092.1 tRNAscan-SE tRNA 59477 59571 . - . ID=rna-C9E93_RS16560;Parent=gene-C9E93_RS16560;anticodon=(pos:complement(59535..59537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS16560;product=tRNA-Sec NZ_PYJV01000092.1 tRNAscan-SE exon 59477 59571 . - . ID=exon-C9E93_RS16560-1;Parent=rna-C9E93_RS16560;anticodon=(pos:complement(59535..59537));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS16560;product=tRNA-Sec NZ_PYJV01000092.1 RefSeq gene 59859 61241 . + . ID=gene-C9E93_RS16565;Name=C9E93_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16565;old_locus_tag=C9E93_16990 NZ_PYJV01000092.1 Protein Homology CDS 59859 61241 . + 0 ID=cds-WP_000834259.1;Parent=gene-C9E93_RS16565;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9E93_RS16565;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 61253 63571 . + . ID=gene-C9E93_RS16570;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9E93_RS16570;old_locus_tag=C9E93_16995 NZ_PYJV01000092.1 Protein Homology CDS 61253 63571 . + 0 ID=cds-WP_135369906.1;Parent=gene-C9E93_RS16570;Dbxref=GenBank:WP_135369906.1;Name=WP_135369906.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9E93_RS16570;product=alpha-xylosidase;protein_id=WP_135369906.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 63674 65383 . - . ID=gene-C9E93_RS16575;Name=C9E93_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16575;old_locus_tag=C9E93_17000 NZ_PYJV01000092.1 Protein Homology CDS 63674 65383 . - 0 ID=cds-WP_000766665.1;Parent=gene-C9E93_RS16575;Dbxref=GenBank:WP_000766665.1;Name=WP_000766665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9E93_RS16575;product=AsmA family protein;protein_id=WP_000766665.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 65504 66895 . - . ID=gene-C9E93_RS16580;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=C9E93_RS16580;old_locus_tag=C9E93_17005 NZ_PYJV01000092.1 Protein Homology CDS 65504 66895 . - 0 ID=cds-WP_000115428.1;Parent=gene-C9E93_RS16580;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9E93_RS16580;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 67123 68328 . + . ID=gene-C9E93_RS16585;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9E93_RS16585;old_locus_tag=C9E93_17010 NZ_PYJV01000092.1 Protein Homology CDS 67123 68328 . + 0 ID=cds-WP_000462255.1;Parent=gene-C9E93_RS16585;Dbxref=GenBank:WP_000462255.1;Name=WP_000462255.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9E93_RS16585;product=sodium/glutamate symporter;protein_id=WP_000462255.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 68364 70445 . - . ID=gene-C9E93_RS16590;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9E93_RS16590;old_locus_tag=C9E93_17015 NZ_PYJV01000092.1 Protein Homology CDS 68364 70445 . - 0 ID=cds-WP_000016748.1;Parent=gene-C9E93_RS16590;Dbxref=GenBank:WP_000016748.1;Name=WP_000016748.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9E93_RS16590;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016748.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 70451 71140 . - . ID=gene-C9E93_RS16595;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9E93_RS16595;old_locus_tag=C9E93_17020 NZ_PYJV01000092.1 Protein Homology CDS 70451 71140 . - 0 ID=cds-WP_001068436.1;Parent=gene-C9E93_RS16595;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9E93_RS16595;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 71145 73256 . - . ID=gene-C9E93_RS16600;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9E93_RS16600;old_locus_tag=C9E93_17025 NZ_PYJV01000092.1 Protein Homology CDS 71145 73256 . - 0 ID=cds-WP_000280481.1;Parent=gene-C9E93_RS16600;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9E93_RS16600;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 73275 73550 . - . ID=gene-C9E93_RS16605;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9E93_RS16605;old_locus_tag=C9E93_17030 NZ_PYJV01000092.1 Protein Homology CDS 73275 73550 . - 0 ID=cds-WP_000135058.1;Parent=gene-C9E93_RS16605;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9E93_RS16605;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 73605 74228 . - . ID=gene-C9E93_RS16610;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9E93_RS16610;old_locus_tag=C9E93_17035 NZ_PYJV01000092.1 Protein Homology CDS 73605 74228 . - 0 ID=cds-WP_000046966.1;Parent=gene-C9E93_RS16610;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9E93_RS16610;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 74485 76170 . + . ID=gene-C9E93_RS16615;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9E93_RS16615;old_locus_tag=C9E93_17040 NZ_PYJV01000092.1 Protein Homology CDS 74485 76170 . + 0 ID=cds-WP_135369908.1;Parent=gene-C9E93_RS16615;Dbxref=GenBank:WP_135369908.1;Name=WP_135369908.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9E93_RS16615;product=NAD-dependent DNA ligase LigB;protein_id=WP_135369908.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 76167 76784 . - . ID=gene-C9E93_RS16620;Name=C9E93_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16620;old_locus_tag=C9E93_17045 NZ_PYJV01000092.1 Protein Homology CDS 76167 76784 . - 0 ID=cds-WP_000924334.1;Parent=gene-C9E93_RS16620;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9E93_RS16620;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 77035 77916 . - . ID=gene-C9E93_RS16625;Name=C9E93_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16625;old_locus_tag=C9E93_17050 NZ_PYJV01000092.1 Protein Homology CDS 77035 77916 . - 0 ID=cds-WP_001082963.1;Parent=gene-C9E93_RS16625;Dbxref=GenBank:WP_001082963.1;Name=WP_001082963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9E93_RS16625;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082963.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 77990 78892 . + . ID=gene-C9E93_RS16630;Name=C9E93_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16630;old_locus_tag=C9E93_17055 NZ_PYJV01000092.1 Protein Homology CDS 77990 78892 . + 0 ID=cds-WP_001050866.1;Parent=gene-C9E93_RS16630;Dbxref=GenBank:WP_001050866.1;Name=WP_001050866.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9E93_RS16630;product=LysR family transcriptional regulator;protein_id=WP_001050866.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 78942 79805 . - . ID=gene-C9E93_RS16635;Name=C9E93_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16635;old_locus_tag=C9E93_17060 NZ_PYJV01000092.1 Protein Homology CDS 78942 79805 . - 0 ID=cds-WP_000621352.1;Parent=gene-C9E93_RS16635;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9E93_RS16635;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 79931 80647 . + . ID=gene-C9E93_RS16640;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9E93_RS16640;old_locus_tag=C9E93_17070 NZ_PYJV01000092.1 Protein Homology CDS 79931 80647 . + 0 ID=cds-WP_001247078.1;Parent=gene-C9E93_RS16640;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9E93_RS16640;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 80726 81367 . + . ID=gene-C9E93_RS16645;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9E93_RS16645;old_locus_tag=C9E93_17075 NZ_PYJV01000092.1 Protein Homology CDS 80726 81367 . + 0 ID=cds-WP_000806167.1;Parent=gene-C9E93_RS16645;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9E93_RS16645;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 81445 82041 . - . ID=gene-C9E93_RS16650;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9E93_RS16650;old_locus_tag=C9E93_17080 NZ_PYJV01000092.1 Protein Homology CDS 81445 82041 . - 0 ID=cds-WP_000818607.1;Parent=gene-C9E93_RS16650;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9E93_RS16650;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 82149 82607 . - . ID=gene-C9E93_RS16655;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9E93_RS16655;old_locus_tag=C9E93_17085 NZ_PYJV01000092.1 Protein Homology CDS 82149 82607 . - 0 ID=cds-WP_000976078.1;Parent=gene-C9E93_RS16655;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9E93_RS16655;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 82585 83805 . - . ID=gene-C9E93_RS16660;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9E93_RS16660;old_locus_tag=C9E93_17090 NZ_PYJV01000092.1 Protein Homology CDS 82585 83805 . - 0 ID=cds-WP_000050176.1;Parent=gene-C9E93_RS16660;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9E93_RS16660;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 83981 84646 . + . ID=gene-C9E93_RS16665;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9E93_RS16665;old_locus_tag=C9E93_17095 NZ_PYJV01000092.1 Protein Homology CDS 83981 84646 . + 0 ID=cds-WP_000380129.1;Parent=gene-C9E93_RS16665;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9E93_RS16665;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 84864 85100 . + . ID=gene-C9E93_RS16670;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9E93_RS16670;old_locus_tag=C9E93_17100 NZ_PYJV01000092.1 Protein Homology CDS 84864 85100 . + 0 ID=cds-WP_001519051.1;Parent=gene-C9E93_RS16670;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9E93_RS16670;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 85121 85288 . + . ID=gene-C9E93_RS16675;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9E93_RS16675;old_locus_tag=C9E93_17105 NZ_PYJV01000092.1 Protein Homology CDS 85121 85288 . + 0 ID=cds-WP_001051798.1;Parent=gene-C9E93_RS16675;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9E93_RS16675;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 85386 86195 . + . ID=gene-C9E93_RS16680;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9E93_RS16680;old_locus_tag=C9E93_17110 NZ_PYJV01000092.1 Protein Homology CDS 85386 86195 . + 0 ID=cds-WP_001114508.1;Parent=gene-C9E93_RS16680;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9E93_RS16680;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 86223 86702 . - . ID=gene-C9E93_RS16685;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9E93_RS16685;old_locus_tag=C9E93_17115 NZ_PYJV01000092.1 Protein Homology CDS 86223 86702 . - 0 ID=cds-WP_001171884.1;Parent=gene-C9E93_RS16685;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9E93_RS16685;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 86711 87988 . - . ID=gene-C9E93_RS16690;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=C9E93_RS16690;old_locus_tag=C9E93_17120 NZ_PYJV01000092.1 Protein Homology CDS 86711 87988 . - 0 ID=cds-WP_000891580.1;Parent=gene-C9E93_RS16690;Dbxref=GenBank:WP_000891580.1;Name=WP_000891580.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9E93_RS16690;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891580.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 88397 89467 . + . ID=gene-C9E93_RS16695;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9E93_RS16695;old_locus_tag=C9E93_17125 NZ_PYJV01000092.1 Protein Homology CDS 88397 89467 . + 0 ID=cds-WP_001526672.1;Parent=gene-C9E93_RS16695;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9E93_RS16695;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 89464 90588 . + . ID=gene-C9E93_RS16700;Name=C9E93_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16700;old_locus_tag=C9E93_17130 NZ_PYJV01000092.1 Protein Homology CDS 89464 90588 . + 0 ID=cds-WP_001261577.1;Parent=gene-C9E93_RS16700;Dbxref=GenBank:WP_001261577.1;Name=WP_001261577.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9E93_RS16700;product=glycosyltransferase family 4 protein;protein_id=WP_001261577.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 90581 91378 . + . ID=gene-C9E93_RS16705;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9E93_RS16705;old_locus_tag=C9E93_17135 NZ_PYJV01000092.1 Protein Homology CDS 90581 91378 . + 0 ID=cds-WP_135369936.1;Parent=gene-C9E93_RS16705;Dbxref=GenBank:WP_135369936.1;Name=WP_135369936.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9E93_RS16705;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_135369936.1;transl_table=11 NZ_PYJV01000092.1 RefSeq gene 91434 91643 . + . ID=gene-C9E93_RS16710;Name=C9E93_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16710;old_locus_tag=C9E93_17140 NZ_PYJV01000092.1 GeneMarkS-2+ CDS 91434 91643 . + 0 ID=cds-WP_000065393.1;Parent=gene-C9E93_RS16710;Dbxref=GenBank:WP_000065393.1;Name=WP_000065393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS16710;product=hypothetical protein;protein_id=WP_000065393.1;transl_table=11 ##sequence-region NZ_PYJV01000081.1 1 87725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000081.1 RefSeq region 1 87725 . + . ID=NZ_PYJV01000081.1:1..87725;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000081.1 RefSeq gene 49 1128 . + . ID=gene-C9E93_RS13965;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9E93_RS13965;old_locus_tag=C9E93_14320 NZ_PYJV01000081.1 Protein Homology CDS 49 1128 . + 0 ID=cds-WP_135370602.1;Parent=gene-C9E93_RS13965;Dbxref=GenBank:WP_135370602.1;Name=WP_135370602.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9E93_RS13965;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_135370602.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 1134 2147 . + . ID=gene-C9E93_RS13970;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9E93_RS13970;old_locus_tag=C9E93_14325 NZ_PYJV01000081.1 Protein Homology CDS 1134 2147 . + 0 ID=cds-WP_023181621.1;Parent=gene-C9E93_RS13970;Dbxref=GenBank:WP_023181621.1;Name=WP_023181621.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9E93_RS13970;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_023181621.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 2165 3178 . + . ID=gene-C9E93_RS13975;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS13975;old_locus_tag=C9E93_14330 NZ_PYJV01000081.1 Protein Homology CDS 2165 3178 . + 0 ID=cds-WP_135400621.1;Parent=gene-C9E93_RS13975;Dbxref=GenBank:WP_135400621.1;Name=WP_135400621.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9E93_RS13975;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_135400621.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 3201 3899 . + . ID=gene-C9E93_RS13980;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9E93_RS13980;old_locus_tag=C9E93_14335 NZ_PYJV01000081.1 Protein Homology CDS 3201 3899 . + 0 ID=cds-WP_135400622.1;Parent=gene-C9E93_RS13980;Dbxref=GenBank:WP_135400622.1;Name=WP_135400622.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9E93_RS13980;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_135400622.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 4049 4858 . + . ID=gene-C9E93_RS13985;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9E93_RS13985;old_locus_tag=C9E93_14340 NZ_PYJV01000081.1 Protein Homology CDS 4049 4858 . + 0 ID=cds-WP_000536017.1;Parent=gene-C9E93_RS13985;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9E93_RS13985;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 4955 6100 . + . ID=gene-C9E93_RS13990;Name=C9E93_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13990;old_locus_tag=C9E93_14345 NZ_PYJV01000081.1 Protein Homology CDS 4955 6100 . + 0 ID=cds-WP_080209349.1;Parent=gene-C9E93_RS13990;Dbxref=GenBank:WP_080209349.1;Name=WP_080209349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9E93_RS13990;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_080209349.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 6156 7370 . - . ID=gene-C9E93_RS13995;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9E93_RS13995;old_locus_tag=C9E93_14350 NZ_PYJV01000081.1 Protein Homology CDS 6156 7370 . - 0 ID=cds-WP_001728215.1;Parent=gene-C9E93_RS13995;Dbxref=GenBank:WP_001728215.1;Name=WP_001728215.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9E93_RS13995;product=O-antigen ligase RfaL;protein_id=WP_001728215.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 7410 8363 . - . ID=gene-C9E93_RS14000;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9E93_RS14000;old_locus_tag=C9E93_14355 NZ_PYJV01000081.1 Protein Homology CDS 7410 8363 . - 0 ID=cds-WP_001264616.1;Parent=gene-C9E93_RS14000;Dbxref=GenBank:WP_001264616.1;Name=WP_001264616.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9E93_RS14000;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264616.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 8363 9409 . - . ID=gene-C9E93_RS14005;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=C9E93_RS14005;old_locus_tag=C9E93_14360 NZ_PYJV01000081.1 Protein Homology CDS 8363 9409 . - 0 ID=cds-WP_000699196.1;Parent=gene-C9E93_RS14005;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9E93_RS14005;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 9412 10344 . - . ID=gene-C9E93_RS14010;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9E93_RS14010;old_locus_tag=C9E93_14365 NZ_PYJV01000081.1 Protein Homology CDS 9412 10344 . - 0 ID=cds-WP_000587771.1;Parent=gene-C9E93_RS14010;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9E93_RS14010;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 10547 11743 . + . ID=gene-C9E93_RS14015;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9E93_RS14015;old_locus_tag=C9E93_14370 NZ_PYJV01000081.1 Protein Homology CDS 10547 11743 . + 0 ID=cds-WP_001213790.1;Parent=gene-C9E93_RS14015;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9E93_RS14015;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 11753 12778 . + . ID=gene-C9E93_RS14020;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9E93_RS14020;old_locus_tag=C9E93_14375 NZ_PYJV01000081.1 Protein Homology CDS 11753 12778 . + 0 ID=cds-WP_000645990.1;Parent=gene-C9E93_RS14020;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9E93_RS14020;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 13071 14105 . + . ID=gene-C9E93_RS14025;Name=C9E93_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14025;old_locus_tag=C9E93_14380 NZ_PYJV01000081.1 Protein Homology CDS 13071 14105 . + 0 ID=cds-WP_135370521.1;Parent=gene-C9E93_RS14025;Dbxref=GenBank:WP_135370521.1;Name=WP_135370521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9E93_RS14025;product=glycosyltransferase;protein_id=WP_135370521.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 14092 15054 . - . ID=gene-C9E93_RS14030;Name=C9E93_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14030;old_locus_tag=C9E93_14385 NZ_PYJV01000081.1 Protein Homology CDS 14092 15054 . - 0 ID=cds-WP_001135519.1;Parent=gene-C9E93_RS14030;Dbxref=GenBank:WP_001135519.1;Name=WP_001135519.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9E93_RS14030;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135519.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 15058 16317 . - . ID=gene-C9E93_RS14035;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9E93_RS14035;old_locus_tag=C9E93_14390 NZ_PYJV01000081.1 Protein Homology CDS 15058 16317 . - 0 ID=cds-WP_058814511.1;Parent=gene-C9E93_RS14035;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9E93_RS14035;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 16351 17895 . - . ID=gene-C9E93_RS14040;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9E93_RS14040;old_locus_tag=C9E93_14395 NZ_PYJV01000081.1 Protein Homology CDS 16351 17895 . - 0 ID=cds-WP_000116588.1;Parent=gene-C9E93_RS14040;Dbxref=GenBank:WP_000116588.1;Name=WP_000116588.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9E93_RS14040;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116588.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 18143 18574 . + . ID=gene-C9E93_RS14045;Name=C9E93_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14045;old_locus_tag=C9E93_14400 NZ_PYJV01000081.1 Protein Homology CDS 18143 18574 . + 0 ID=cds-WP_001156179.1;Parent=gene-C9E93_RS14045;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9E93_RS14045;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 18660 18911 . + . ID=gene-C9E93_RS14050;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9E93_RS14050;old_locus_tag=C9E93_14405 NZ_PYJV01000081.1 Protein Homology CDS 18660 18911 . + 0 ID=cds-WP_001273795.1;Parent=gene-C9E93_RS14050;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9E93_RS14050;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 18955 19422 . + . ID=gene-C9E93_RS14055;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9E93_RS14055;old_locus_tag=C9E93_14410 NZ_PYJV01000081.1 Protein Homology CDS 18955 19422 . + 0 ID=cds-WP_000003370.1;Parent=gene-C9E93_RS14055;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9E93_RS14055;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 19422 20441 . + . ID=gene-C9E93_RS14060;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9E93_RS14060;old_locus_tag=C9E93_14415 NZ_PYJV01000081.1 Protein Homology CDS 19422 20441 . + 0 ID=cds-WP_001076596.1;Parent=gene-C9E93_RS14060;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9E93_RS14060;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 20519 21340 . + . ID=gene-C9E93_RS14065;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9E93_RS14065;old_locus_tag=C9E93_14420 NZ_PYJV01000081.1 Protein Homology CDS 20519 21340 . + 0 ID=cds-WP_001112113.1;Parent=gene-C9E93_RS14065;Dbxref=GenBank:WP_001112113.1;Name=WP_001112113.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9E93_RS14065;product=serine O-acetyltransferase;protein_id=WP_001112113.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 21423 22733 . - . ID=gene-C9E93_RS14070;Name=C9E93_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14070;old_locus_tag=C9E93_14425 NZ_PYJV01000081.1 Protein Homology CDS 21423 22733 . - 0 ID=cds-WP_001092104.1;Parent=gene-C9E93_RS14070;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9E93_RS14070;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 22807 24003 . - . ID=gene-C9E93_RS14075;Name=C9E93_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14075;old_locus_tag=C9E93_14430 NZ_PYJV01000081.1 Protein Homology CDS 22807 24003 . - 0 ID=cds-WP_001218249.1;Parent=gene-C9E93_RS14075;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9E93_RS14075;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 24322 25326 . + . ID=gene-C9E93_RS14080;Name=C9E93_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14080;old_locus_tag=C9E93_14440 NZ_PYJV01000081.1 Protein Homology CDS 24322 25326 . + 0 ID=cds-WP_001537635.1;Parent=gene-C9E93_RS14080;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9E93_RS14080;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 25394 25867 . - . ID=gene-C9E93_RS14085;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9E93_RS14085;old_locus_tag=C9E93_14445 NZ_PYJV01000081.1 Protein Homology CDS 25394 25867 . - 0 ID=cds-WP_000932335.1;Parent=gene-C9E93_RS14085;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9E93_RS14085;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 25932 27122 . - . ID=gene-C9E93_RS14090;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9E93_RS14090;old_locus_tag=C9E93_14450 NZ_PYJV01000081.1 Protein Homology CDS 25932 27122 . - 0 ID=cds-WP_000587002.1;Parent=gene-C9E93_RS14090;Dbxref=GenBank:WP_000587002.1;Name=WP_000587002.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9E93_RS14090;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000587002.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 27119 27895 . - . ID=gene-C9E93_RS14095;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=C9E93_RS14095;old_locus_tag=C9E93_14455 NZ_PYJV01000081.1 Protein Homology CDS 27119 27895 . - 0 ID=cds-WP_135370522.1;Parent=gene-C9E93_RS14095;Dbxref=GenBank:WP_135370522.1;Name=WP_135370522.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9E93_RS14095;product=transcriptional regulator LldR;protein_id=WP_135370522.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 27892 29547 . - . ID=gene-C9E93_RS14100;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9E93_RS14100;old_locus_tag=C9E93_14460 NZ_PYJV01000081.1 Protein Homology CDS 27892 29547 . - 0 ID=cds-WP_001055309.1;Parent=gene-C9E93_RS14100;Dbxref=GenBank:WP_001055309.1;Name=WP_001055309.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9E93_RS14100;product=L-lactate permease;protein_id=WP_001055309.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 29846 34231 . - . ID=gene-C9E93_RS14105;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9E93_RS14105;old_locus_tag=C9E93_14465 NZ_PYJV01000081.1 Protein Homology CDS 29846 34231 . - 0 ID=cds-WP_135370523.1;Parent=gene-C9E93_RS14105;Dbxref=GenBank:WP_135370523.1;Name=WP_135370523.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9E93_RS14105;product=trimeric autotransporter adhesin SadA;protein_id=WP_135370523.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 34275 34958 . - . ID=gene-C9E93_RS14110;Name=C9E93_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14110;old_locus_tag=C9E93_14470 NZ_PYJV01000081.1 Protein Homology CDS 34275 34958 . - 0 ID=cds-WP_080151147.1;Parent=gene-C9E93_RS14110;Dbxref=GenBank:WP_080151147.1;Name=WP_080151147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9E93_RS14110;product=DUF3251 domain-containing protein;protein_id=WP_080151147.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 35445 35807 . - . ID=gene-C9E93_RS14115;Name=C9E93_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14115;old_locus_tag=C9E93_14475 NZ_PYJV01000081.1 Protein Homology CDS 35445 35807 . - 0 ID=cds-WP_000665687.1;Parent=gene-C9E93_RS14115;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9E93_RS14115;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 36098 36307 . + . ID=gene-C9E93_RS14120;Name=C9E93_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14120;old_locus_tag=C9E93_14480 NZ_PYJV01000081.1 Protein Homology CDS 36098 36307 . + 0 ID=cds-WP_001062558.1;Parent=gene-C9E93_RS14120;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9E93_RS14120;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 36317 36907 . - . ID=gene-C9E93_RS14125;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9E93_RS14125;old_locus_tag=C9E93_14485 NZ_PYJV01000081.1 Protein Homology CDS 36317 36907 . - 0 ID=cds-WP_000193201.1;Parent=gene-C9E93_RS14125;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9E93_RS14125;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 36904 38052 . - . ID=gene-C9E93_RS14130;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9E93_RS14130;old_locus_tag=C9E93_14490 NZ_PYJV01000081.1 Protein Homology CDS 36904 38052 . - 0 ID=cds-WP_000645397.1;Parent=gene-C9E93_RS14130;Dbxref=GenBank:WP_000645397.1;Name=WP_000645397.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9E93_RS14130;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645397.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 38283 40199 . - . ID=gene-C9E93_RS14135;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9E93_RS14135;old_locus_tag=C9E93_14495 NZ_PYJV01000081.1 Protein Homology CDS 38283 40199 . - 0 ID=cds-WP_000093287.1;Parent=gene-C9E93_RS14135;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9E93_RS14135;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 40675 41283 . + . ID=gene-C9E93_RS14140;Name=C9E93_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14140;old_locus_tag=C9E93_14500 NZ_PYJV01000081.1 Protein Homology CDS 40675 41283 . + 0 ID=cds-WP_000766688.1;Parent=gene-C9E93_RS14140;Dbxref=GenBank:WP_000766688.1;Name=WP_000766688.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9E93_RS14140;product=glutathione S-transferase;protein_id=WP_000766688.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 41382 42773 . + . ID=gene-C9E93_RS14145;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9E93_RS14145;old_locus_tag=C9E93_14505 NZ_PYJV01000081.1 Protein Homology CDS 41382 42773 . + 0 ID=cds-WP_000200188.1;Parent=gene-C9E93_RS14145;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9E93_RS14145;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 42770 44620 . + . ID=gene-C9E93_RS14150;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9E93_RS14150;old_locus_tag=C9E93_14510 NZ_PYJV01000081.1 Protein Homology CDS 42770 44620 . + 0 ID=cds-WP_135370092.1;Parent=gene-C9E93_RS14150;Dbxref=GenBank:WP_135370092.1;Name=WP_135370092.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9E93_RS14150;product=selenocysteine-specific translation elongation factor;protein_id=WP_135370092.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 44868 45749 . - . ID=gene-C9E93_RS14155;Name=C9E93_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14155;old_locus_tag=C9E93_14515 NZ_PYJV01000081.1 Protein Homology CDS 44868 45749 . - 0 ID=cds-WP_135370091.1;Parent=gene-C9E93_RS14155;Dbxref=GenBank:WP_135370091.1;Name=WP_135370091.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9E93_RS14155;product=ROK family protein;protein_id=WP_135370091.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 45918 47456 . + . ID=gene-C9E93_RS14160;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9E93_RS14160;old_locus_tag=C9E93_14520 NZ_PYJV01000081.1 Protein Homology CDS 45918 47456 . + 0 ID=cds-WP_135370090.1;Parent=gene-C9E93_RS14160;Dbxref=GenBank:WP_135370090.1;Name=WP_135370090.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9E93_RS14160;product=aldehyde dehydrogenase AldB;protein_id=WP_135370090.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 47686 49641 . - . ID=gene-C9E93_RS14165;Name=C9E93_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14165;old_locus_tag=C9E93_14525 NZ_PYJV01000081.1 Protein Homology CDS 47686 49641 . - 0 ID=cds-WP_135370089.1;Parent=gene-C9E93_RS14165;Dbxref=GenBank:WP_135370089.1;Name=WP_135370089.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9E93_RS14165;product=glycoside hydrolase family 127 protein;protein_id=WP_135370089.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 49905 50720 . + . ID=gene-C9E93_RS14170;Name=C9E93_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14170;old_locus_tag=C9E93_14530 NZ_PYJV01000081.1 Protein Homology CDS 49905 50720 . + 0 ID=cds-WP_000891816.1;Parent=gene-C9E93_RS14170;Dbxref=GenBank:WP_000891816.1;Name=WP_000891816.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9E93_RS14170;product=AraC family transcriptional regulator;protein_id=WP_000891816.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 50881 51576 . - . ID=gene-C9E93_RS14175;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E93_RS14175;old_locus_tag=C9E93_14535 NZ_PYJV01000081.1 Protein Homology CDS 50881 51576 . - 0 ID=cds-WP_017466036.1;Parent=gene-C9E93_RS14175;Dbxref=GenBank:WP_017466036.1;Name=WP_017466036.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9E93_RS14175;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_017466036.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 51570 52430 . - . ID=gene-C9E93_RS14180;Name=C9E93_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14180;old_locus_tag=C9E93_14540 NZ_PYJV01000081.1 Protein Homology CDS 51570 52430 . - 0 ID=cds-WP_135370088.1;Parent=gene-C9E93_RS14180;Dbxref=GenBank:WP_135370088.1;Name=WP_135370088.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9E93_RS14180;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_135370088.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 52423 53085 . - . ID=gene-C9E93_RS14185;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E93_RS14185;old_locus_tag=C9E93_14545 NZ_PYJV01000081.1 Protein Homology CDS 52423 53085 . - 0 ID=cds-WP_135370087.1;Parent=gene-C9E93_RS14185;Dbxref=GenBank:WP_135370087.1;Name=WP_135370087.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9E93_RS14185;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_135370087.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 53082 54578 . - . ID=gene-C9E93_RS14190;Name=C9E93_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14190;old_locus_tag=C9E93_14550 NZ_PYJV01000081.1 Protein Homology CDS 53082 54578 . - 0 ID=cds-WP_000074085.1;Parent=gene-C9E93_RS14190;Dbxref=GenBank:WP_000074085.1;Name=WP_000074085.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9E93_RS14190;product=FGGY-family carbohydrate kinase;protein_id=WP_000074085.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 54582 55568 . - . ID=gene-C9E93_RS14195;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=C9E93_RS14195;old_locus_tag=C9E93_14555 NZ_PYJV01000081.1 Protein Homology CDS 54582 55568 . - 0 ID=cds-WP_000766341.1;Parent=gene-C9E93_RS14195;Dbxref=GenBank:WP_000766341.1;Name=WP_000766341.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9E93_RS14195;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766341.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 55580 56857 . - . ID=gene-C9E93_RS14200;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9E93_RS14200;old_locus_tag=C9E93_14560 NZ_PYJV01000081.1 Protein Homology CDS 55580 56857 . - 0 ID=cds-WP_000301822.1;Parent=gene-C9E93_RS14200;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9E93_RS14200;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 56860 57333 . - . ID=gene-C9E93_RS14205;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9E93_RS14205;old_locus_tag=C9E93_14565 NZ_PYJV01000081.1 Protein Homology CDS 56860 57333 . - 0 ID=cds-WP_000832316.1;Parent=gene-C9E93_RS14205;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9E93_RS14205;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 57462 58403 . - . ID=gene-C9E93_RS14210;Name=C9E93_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14210;old_locus_tag=C9E93_14570 NZ_PYJV01000081.1 Protein Homology CDS 57462 58403 . - 0 ID=cds-WP_135370086.1;Parent=gene-C9E93_RS14210;Dbxref=GenBank:WP_135370086.1;Name=WP_135370086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466038.1;locus_tag=C9E93_RS14210;product=DUF4862 family protein;protein_id=WP_135370086.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 58427 58891 . - . ID=gene-C9E93_RS14215;Name=C9E93_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14215;old_locus_tag=C9E93_14575 NZ_PYJV01000081.1 Protein Homology CDS 58427 58891 . - 0 ID=cds-WP_000576102.1;Parent=gene-C9E93_RS14215;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9E93_RS14215;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 58903 59901 . - . ID=gene-C9E93_RS14220;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9E93_RS14220;old_locus_tag=C9E93_14580 NZ_PYJV01000081.1 Protein Homology CDS 58903 59901 . - 0 ID=cds-WP_000861182.1;Parent=gene-C9E93_RS14220;Dbxref=GenBank:WP_000861182.1;Name=WP_000861182.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9E93_RS14220;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000861182.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 60131 60931 . + . ID=gene-C9E93_RS14225;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS14225;old_locus_tag=C9E93_14585 NZ_PYJV01000081.1 Protein Homology CDS 60131 60931 . + 0 ID=cds-WP_000081338.1;Parent=gene-C9E93_RS14225;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9E93_RS14225;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 61048 61521 . + . ID=gene-C9E93_RS14230;Name=C9E93_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14230;old_locus_tag=C9E93_14590 NZ_PYJV01000081.1 Protein Homology CDS 61048 61521 . + 0 ID=cds-WP_079986590.1;Parent=gene-C9E93_RS14230;Dbxref=GenBank:WP_079986590.1;Name=WP_079986590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9E93_RS14230;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_079986590.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 61558 62808 . - . ID=gene-C9E93_RS14235;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9E93_RS14235;old_locus_tag=C9E93_14595 NZ_PYJV01000081.1 Protein Homology CDS 61558 62808 . - 0 ID=cds-WP_000144379.1;Parent=gene-C9E93_RS14235;Dbxref=GenBank:WP_000144379.1;Name=WP_000144379.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9E93_RS14235;product=valine--pyruvate transaminase;protein_id=WP_000144379.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 62982 65009 . - . ID=gene-C9E93_RS14240;Name=C9E93_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14240;old_locus_tag=C9E93_14600 NZ_PYJV01000081.1 Protein Homology CDS 62982 65009 . - 0 ID=cds-WP_135370085.1;Parent=gene-C9E93_RS14240;Dbxref=GenBank:WP_135370085.1;Name=WP_135370085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9E93_RS14240;product=alpha-amylase;protein_id=WP_135370085.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 65325 66149 . + . ID=gene-C9E93_RS14245;Name=C9E93_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14245;old_locus_tag=C9E93_14610 NZ_PYJV01000081.1 Protein Homology CDS 65325 66149 . + 0 ID=cds-WP_001575119.1;Parent=gene-C9E93_RS14245;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9E93_RS14245;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 66210 67388 . - . ID=gene-C9E93_RS14250;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=C9E93_RS14250;old_locus_tag=C9E93_14615 NZ_PYJV01000081.1 Protein Homology CDS 66210 67388 . - 0 ID=cds-WP_000459824.1;Parent=gene-C9E93_RS14250;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9E93_RS14250;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 67751 69073 . + . ID=gene-C9E93_RS14260;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9E93_RS14260;old_locus_tag=C9E93_14625 NZ_PYJV01000081.1 Protein Homology CDS 67751 69073 . + 0 ID=cds-WP_001149561.1;Parent=gene-C9E93_RS14260;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9E93_RS14260;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 69173 70627 . + . ID=gene-C9E93_RS14265;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9E93_RS14265;old_locus_tag=C9E93_14630 NZ_PYJV01000081.1 Protein Homology CDS 69173 70627 . + 0 ID=cds-WP_000275326.1;Parent=gene-C9E93_RS14265;Dbxref=GenBank:WP_000275326.1;Name=WP_000275326.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9E93_RS14265;product=xylulokinase;protein_id=WP_000275326.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 70802 71155 . + . ID=gene-C9E93_RS14270;Name=C9E93_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14270;old_locus_tag=C9E93_14635 NZ_PYJV01000081.1 Protein Homology CDS 70802 71155 . + 0 ID=cds-WP_000340935.1;Parent=gene-C9E93_RS14270;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9E93_RS14270;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 71178 72173 . - . ID=gene-C9E93_RS14275;Name=C9E93_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14275;old_locus_tag=C9E93_14640 NZ_PYJV01000081.1 Protein Homology CDS 71178 72173 . - 0 ID=cds-WP_021000894.1;Parent=gene-C9E93_RS14275;Dbxref=GenBank:WP_021000894.1;Name=WP_021000894.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9E93_RS14275;product=acyltransferase;protein_id=WP_021000894.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 72339 72641 . + . ID=gene-C9E93_RS14285;Name=C9E93_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14285;old_locus_tag=C9E93_14650 NZ_PYJV01000081.1 Protein Homology CDS 72339 72641 . + 0 ID=cds-WP_000605590.1;Parent=gene-C9E93_RS14285;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9E93_RS14285;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 72780 73691 . + . ID=gene-C9E93_RS14290;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9E93_RS14290;old_locus_tag=C9E93_14655 NZ_PYJV01000081.1 Protein Homology CDS 72780 73691 . + 0 ID=cds-WP_001168557.1;Parent=gene-C9E93_RS14290;Dbxref=GenBank:WP_001168557.1;Name=WP_001168557.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9E93_RS14290;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168557.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 73701 75770 . + . ID=gene-C9E93_RS14295;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9E93_RS14295;old_locus_tag=C9E93_14660 NZ_PYJV01000081.1 Protein Homology CDS 73701 75770 . + 0 ID=cds-WP_135370097.1;Parent=gene-C9E93_RS14295;Dbxref=GenBank:WP_135370097.1;Name=WP_135370097.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9E93_RS14295;product=glycine--tRNA ligase subunit beta;protein_id=WP_135370097.1;transl_table=11 NZ_PYJV01000081.1 RefSeq pseudogene 76247 76660 . + . ID=gene-C9E93_RS23955;Name=C9E93_RS23955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23955;partial=true;pseudo=true;start_range=.,76247 NZ_PYJV01000081.1 Protein Homology CDS 76247 76660 . + 0 ID=cds-C9E93_RS23955;Parent=gene-C9E93_RS23955;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=C9E93_RS23955;partial=true;product=transposase;pseudo=true;start_range=.,76247;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 76802 77269 . + . ID=gene-C9E93_RS14305;Name=C9E93_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14305;old_locus_tag=C9E93_14670 NZ_PYJV01000081.1 Protein Homology CDS 76802 77269 . + 0 ID=cds-WP_000702452.1;Parent=gene-C9E93_RS14305;Dbxref=GenBank:WP_000702452.1;Name=WP_000702452.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=C9E93_RS14305;product=GNAT family N-acetyltransferase;protein_id=WP_000702452.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 77447 77734 . + . ID=gene-C9E93_RS14310;Name=C9E93_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14310;old_locus_tag=C9E93_14675 NZ_PYJV01000081.1 Protein Homology CDS 77447 77734 . + 0 ID=cds-WP_077917656.1;Parent=gene-C9E93_RS14310;Dbxref=GenBank:WP_077917656.1;Name=WP_077917656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=C9E93_RS14310;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_077917656.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 77722 78207 . + . ID=gene-C9E93_RS14315;Name=C9E93_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14315;old_locus_tag=C9E93_14680 NZ_PYJV01000081.1 Protein Homology CDS 77722 78207 . + 0 ID=cds-WP_000533909.1;Parent=gene-C9E93_RS14315;Dbxref=GenBank:WP_000533909.1;Name=WP_000533909.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=C9E93_RS14315;product=GNAT family N-acetyltransferase;protein_id=WP_000533909.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 78581 79120 . - . ID=gene-C9E93_RS14320;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9E93_RS14320;old_locus_tag=C9E93_14685 NZ_PYJV01000081.1 Protein Homology CDS 78581 79120 . - 0 ID=cds-WP_000047148.1;Parent=gene-C9E93_RS14320;Dbxref=GenBank:WP_000047148.1;Name=WP_000047148.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9E93_RS14320;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047148.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 79293 79505 . - . ID=gene-C9E93_RS14325;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E93_RS14325;old_locus_tag=C9E93_14690 NZ_PYJV01000081.1 Protein Homology CDS 79293 79505 . - 0 ID=cds-WP_000014594.1;Parent=gene-C9E93_RS14325;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9E93_RS14325;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 79792 80082 . - . ID=gene-C9E93_RS14330;Name=C9E93_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14330;old_locus_tag=C9E93_14695 NZ_PYJV01000081.1 Protein Homology CDS 79792 80082 . - 0 ID=cds-WP_000455790.1;Parent=gene-C9E93_RS14330;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9E93_RS14330;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 80521 81231 . + . ID=gene-C9E93_RS14335;Name=C9E93_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14335;old_locus_tag=C9E93_14700 NZ_PYJV01000081.1 Protein Homology CDS 80521 81231 . + 0 ID=cds-WP_000190524.1;Parent=gene-C9E93_RS14335;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9E93_RS14335;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 81281 82255 . - . ID=gene-C9E93_RS14340;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9E93_RS14340;old_locus_tag=C9E93_14705 NZ_PYJV01000081.1 Protein Homology CDS 81281 82255 . - 0 ID=cds-WP_000804681.1;Parent=gene-C9E93_RS14340;Dbxref=GenBank:WP_000804681.1;Name=WP_000804681.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9E93_RS14340;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804681.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 82474 83136 . - . ID=gene-C9E93_RS14345;Name=C9E93_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14345;old_locus_tag=C9E93_14710 NZ_PYJV01000081.1 Protein Homology CDS 82474 83136 . - 0 ID=cds-WP_000747548.1;Parent=gene-C9E93_RS14345;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9E93_RS14345;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 83289 85622 . + . ID=gene-C9E93_RS14350;Name=C9E93_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14350;old_locus_tag=C9E93_14715 NZ_PYJV01000081.1 Protein Homology CDS 83289 85622 . + 0 ID=cds-WP_135369980.1;Parent=gene-C9E93_RS14350;Dbxref=GenBank:WP_135369980.1;Name=WP_135369980.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9E93_RS14350;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_135369980.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 85591 86031 . - . ID=gene-C9E93_RS14355;Name=C9E93_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14355;old_locus_tag=C9E93_14720 NZ_PYJV01000081.1 Protein Homology CDS 85591 86031 . - 0 ID=cds-WP_000619902.1;Parent=gene-C9E93_RS14355;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9E93_RS14355;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 86009 86590 . - . ID=gene-C9E93_RS14360;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9E93_RS14360;old_locus_tag=C9E93_14725 NZ_PYJV01000081.1 Protein Homology CDS 86009 86590 . - 0 ID=cds-WP_001188405.1;Parent=gene-C9E93_RS14360;Dbxref=GenBank:WP_001188405.1;Name=WP_001188405.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9E93_RS14360;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188405.1;transl_table=11 NZ_PYJV01000081.1 RefSeq gene 86747 87451 . + . ID=gene-C9E93_RS14365;Name=C9E93_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14365;old_locus_tag=C9E93_14730 NZ_PYJV01000081.1 Protein Homology CDS 86747 87451 . + 0 ID=cds-WP_080230360.1;Parent=gene-C9E93_RS14365;Dbxref=GenBank:WP_080230360.1;Name=WP_080230360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9E93_RS14365;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_080230360.1;transl_table=11 ##sequence-region NZ_PYJV01000125.1 1 86042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000125.1 RefSeq region 1 86042 . + . ID=NZ_PYJV01000125.1:1..86042;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000125.1 RefSeq gene 333 965 . - . ID=gene-C9E93_RS22330;Name=C9E93_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22330;old_locus_tag=C9E93_22930 NZ_PYJV01000125.1 Protein Homology CDS 333 965 . - 0 ID=cds-WP_001650607.1;Parent=gene-C9E93_RS22330;Dbxref=GenBank:WP_001650607.1;Name=WP_001650607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9E93_RS22330;product=YfdX family protein;protein_id=WP_001650607.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 1012 1548 . - . ID=gene-C9E93_RS22335;Name=C9E93_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22335;old_locus_tag=C9E93_22935 NZ_PYJV01000125.1 Protein Homology CDS 1012 1548 . - 0 ID=cds-WP_058107364.1;Parent=gene-C9E93_RS22335;Dbxref=GenBank:WP_058107364.1;Name=WP_058107364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9E93_RS22335;product=STM3031 family outer membrane protein;protein_id=WP_058107364.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 2354 2752 . - . ID=gene-C9E93_RS22345;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=C9E93_RS22345;old_locus_tag=C9E93_22950 NZ_PYJV01000125.1 Protein Homology CDS 2354 2752 . - 0 ID=cds-WP_000911337.1;Parent=gene-C9E93_RS22345;Dbxref=GenBank:WP_000911337.1;Name=WP_000911337.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=C9E93_RS22345;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911337.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 2752 2979 . - . ID=gene-C9E93_RS22350;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=C9E93_RS22350;old_locus_tag=C9E93_22955 NZ_PYJV01000125.1 Protein Homology CDS 2752 2979 . - 0 ID=cds-WP_000557549.1;Parent=gene-C9E93_RS22350;Dbxref=GenBank:WP_000557549.1;Name=WP_000557549.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461951.1;locus_tag=C9E93_RS22350;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557549.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 3188 3400 . + . ID=gene-C9E93_RS22355;Name=C9E93_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22355;old_locus_tag=C9E93_22960 NZ_PYJV01000125.1 Protein Homology CDS 3188 3400 . + 0 ID=cds-WP_135370193.1;Parent=gene-C9E93_RS22355;Dbxref=GenBank:WP_135370193.1;Name=WP_135370193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=C9E93_RS22355;product=hypothetical protein;protein_id=WP_135370193.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 3493 3566 . - . ID=gene-C9E93_RS22360;Name=C9E93_RS22360;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS22360;old_locus_tag=C9E93_22965 NZ_PYJV01000125.1 tRNAscan-SE tRNA 3493 3566 . - . ID=rna-C9E93_RS22360;Parent=gene-C9E93_RS22360;anticodon=(pos:complement(3532..3534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22360;product=tRNA-Gly NZ_PYJV01000125.1 tRNAscan-SE exon 3493 3566 . - . ID=exon-C9E93_RS22360-1;Parent=rna-C9E93_RS22360;anticodon=(pos:complement(3532..3534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22360;product=tRNA-Gly NZ_PYJV01000125.1 RefSeq gene 3646 4404 . - . ID=gene-C9E93_RS22365;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=C9E93_RS22365;old_locus_tag=C9E93_22970 NZ_PYJV01000125.1 Protein Homology CDS 3646 4404 . - 0 ID=cds-WP_000244328.1;Parent=gene-C9E93_RS22365;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9E93_RS22365;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 4669 5214 . + . ID=gene-C9E93_RS22370;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9E93_RS22370;old_locus_tag=C9E93_22980 NZ_PYJV01000125.1 Protein Homology CDS 4669 5214 . + 0 ID=cds-WP_000133994.1;Parent=gene-C9E93_RS22370;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9E93_RS22370;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 5290 6807 . - . ID=gene-C9E93_RS22375;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9E93_RS22375;old_locus_tag=C9E93_22985 NZ_PYJV01000125.1 Protein Homology CDS 5290 6807 . - 0 ID=cds-WP_000003339.1;Parent=gene-C9E93_RS22375;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9E93_RS22375;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 6817 7915 . - . ID=gene-C9E93_RS22380;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9E93_RS22380;old_locus_tag=C9E93_22990 NZ_PYJV01000125.1 Protein Homology CDS 7841 7915 . - 0 ID=cds-WP_010989230.1;Parent=gene-C9E93_RS22380;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E93_RS22380;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_PYJV01000125.1 Protein Homology CDS 6817 7839 . - 0 ID=cds-WP_010989230.1;Parent=gene-C9E93_RS22380;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E93_RS22380;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 8020 9753 . - . ID=gene-C9E93_RS22385;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9E93_RS22385;old_locus_tag=C9E93_22995 NZ_PYJV01000125.1 Protein Homology CDS 8020 9753 . - 0 ID=cds-WP_000813394.1;Parent=gene-C9E93_RS22385;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9E93_RS22385;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 9759 10472 . - . ID=gene-C9E93_RS22390;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9E93_RS22390;old_locus_tag=C9E93_23000 NZ_PYJV01000125.1 Protein Homology CDS 9759 10472 . - 0 ID=cds-WP_000745614.1;Parent=gene-C9E93_RS22390;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9E93_RS22390;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 10496 11392 . - . ID=gene-C9E93_RS22395;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9E93_RS22395;old_locus_tag=C9E93_23005 NZ_PYJV01000125.1 Protein Homology CDS 10496 11392 . - 0 ID=cds-WP_000434302.1;Parent=gene-C9E93_RS22395;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9E93_RS22395;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 11505 12026 . + . ID=gene-C9E93_RS22400;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9E93_RS22400;old_locus_tag=C9E93_23010 NZ_PYJV01000125.1 Protein Homology CDS 11505 12026 . + 0 ID=cds-WP_001055885.1;Parent=gene-C9E93_RS22400;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9E93_RS22400;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 12079 12492 . - . ID=gene-C9E93_RS22405;Name=C9E93_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22405;old_locus_tag=C9E93_23015 NZ_PYJV01000125.1 Protein Homology CDS 12079 12492 . - 0 ID=cds-WP_000244756.1;Parent=gene-C9E93_RS22405;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9E93_RS22405;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 12473 12739 . - . ID=gene-C9E93_RS22410;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9E93_RS22410;old_locus_tag=C9E93_23020 NZ_PYJV01000125.1 Protein Homology CDS 12473 12739 . - 0 ID=cds-WP_000351186.1;Parent=gene-C9E93_RS22410;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9E93_RS22410;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 12989 13969 . + . ID=gene-C9E93_RS22415;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9E93_RS22415;old_locus_tag=C9E93_23030 NZ_PYJV01000125.1 Protein Homology CDS 12989 13969 . + 0 ID=cds-WP_000874176.1;Parent=gene-C9E93_RS22415;Dbxref=GenBank:WP_000874176.1;Name=WP_000874176.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9E93_RS22415;product=tRNA-modifying protein YgfZ;protein_id=WP_000874176.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 14085 14744 . - . ID=gene-C9E93_RS22425;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=C9E93_RS22425;old_locus_tag=C9E93_23040 NZ_PYJV01000125.1 Protein Homology CDS 14085 14744 . - 0 ID=cds-WP_135370192.1;Parent=gene-C9E93_RS22425;Dbxref=GenBank:WP_135370192.1;Name=WP_135370192.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9E93_RS22425;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_135370192.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 14908 15219 . - . ID=gene-C9E93_RS22430;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9E93_RS22430;old_locus_tag=C9E93_23045 NZ_PYJV01000125.1 Protein Homology CDS 14908 15219 . - 0 ID=cds-WP_001182976.1;Parent=gene-C9E93_RS22430;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9E93_RS22430;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 15378 16811 . + . ID=gene-C9E93_RS22435;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9E93_RS22435;old_locus_tag=C9E93_23050 NZ_PYJV01000125.1 Protein Homology CDS 15378 16811 . + 0 ID=cds-WP_001230141.1;Parent=gene-C9E93_RS22435;Dbxref=GenBank:WP_001230141.1;Name=WP_001230141.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9E93_RS22435;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230141.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 16859 17752 . - . ID=gene-C9E93_RS22440;Name=C9E93_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22440;old_locus_tag=C9E93_23055 NZ_PYJV01000125.1 Protein Homology CDS 16859 17752 . - 0 ID=cds-WP_000819375.1;Parent=gene-C9E93_RS22440;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9E93_RS22440;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 18208 21081 . - . ID=gene-C9E93_RS22450;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9E93_RS22450;old_locus_tag=C9E93_23065 NZ_PYJV01000125.1 Protein Homology CDS 18208 21081 . - 0 ID=cds-WP_000194964.1;Parent=gene-C9E93_RS22450;Dbxref=GenBank:WP_000194964.1;Name=WP_000194964.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9E93_RS22450;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000194964.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 21244 21633 . - . ID=gene-C9E93_RS22455;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9E93_RS22455;old_locus_tag=C9E93_23070 NZ_PYJV01000125.1 Protein Homology CDS 21244 21633 . - 0 ID=cds-WP_001295377.1;Parent=gene-C9E93_RS22455;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9E93_RS22455;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 21659 22753 . - . ID=gene-C9E93_RS22460;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9E93_RS22460;old_locus_tag=C9E93_23075 NZ_PYJV01000125.1 Protein Homology CDS 21659 22753 . - 0 ID=cds-WP_000068738.1;Parent=gene-C9E93_RS22460;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9E93_RS22460;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 23208 24410 . - . ID=gene-C9E93_RS22465;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9E93_RS22465;old_locus_tag=C9E93_23080 NZ_PYJV01000125.1 Protein Homology CDS 23208 24410 . - 0 ID=cds-WP_001192144.1;Parent=gene-C9E93_RS22465;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9E93_RS22465;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 24536 25714 . - . ID=gene-C9E93_RS22470;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9E93_RS22470;old_locus_tag=C9E93_23085 NZ_PYJV01000125.1 Protein Homology CDS 24536 25714 . - 0 ID=cds-WP_000111140.1;Parent=gene-C9E93_RS22470;Dbxref=GenBank:WP_000111140.1;Name=WP_000111140.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9E93_RS22470;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111140.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 25711 27027 . - . ID=gene-C9E93_RS22475;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9E93_RS22475;old_locus_tag=C9E93_23090 NZ_PYJV01000125.1 Protein Homology CDS 25711 27027 . - 0 ID=cds-WP_001650619.1;Parent=gene-C9E93_RS22475;Dbxref=GenBank:WP_001650619.1;Name=WP_001650619.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9E93_RS22475;product=Xaa-Pro aminopeptidase;protein_id=WP_001650619.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 27053 27631 . - . ID=gene-C9E93_RS22480;Name=C9E93_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22480;old_locus_tag=C9E93_23095 NZ_PYJV01000125.1 Protein Homology CDS 27053 27631 . - 0 ID=cds-WP_000027236.1;Parent=gene-C9E93_RS22480;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9E93_RS22480;product=YecA/YgfB family protein;protein_id=WP_000027236.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 27798 28127 . + . ID=gene-C9E93_RS22485;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9E93_RS22485;old_locus_tag=C9E93_23105 NZ_PYJV01000125.1 Protein Homology CDS 27798 28127 . + 0 ID=cds-WP_001276011.1;Parent=gene-C9E93_RS22485;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9E93_RS22485;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 28169 28352 . + . ID=gene-C9E93_RS22490;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9E93_RS22490;old_locus_tag=C9E93_23110 NZ_PYJV01000125.1 cmsearch ncRNA 28169 28352 . + . ID=rna-C9E93_RS22490;Parent=gene-C9E93_RS22490;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS22490;product=6S RNA NZ_PYJV01000125.1 cmsearch exon 28169 28352 . + . ID=exon-C9E93_RS22490-1;Parent=rna-C9E93_RS22490;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS22490;product=6S RNA NZ_PYJV01000125.1 RefSeq gene 28373 28969 . + . ID=gene-C9E93_RS22495;Name=C9E93_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22495;old_locus_tag=C9E93_23115 NZ_PYJV01000125.1 Protein Homology CDS 28373 28969 . + 0 ID=cds-WP_001519554.1;Parent=gene-C9E93_RS22495;Dbxref=GenBank:WP_001519554.1;Name=WP_001519554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9E93_RS22495;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001519554.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 29350 30582 . - . ID=gene-C9E93_RS22500;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9E93_RS22500;old_locus_tag=C9E93_23120 NZ_PYJV01000125.1 Protein Homology CDS 29350 30582 . - 0 ID=cds-WP_001151627.1;Parent=gene-C9E93_RS22500;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9E93_RS22500;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 30849 31508 . - . ID=gene-C9E93_RS22505;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9E93_RS22505;old_locus_tag=C9E93_23125 NZ_PYJV01000125.1 Protein Homology CDS 30849 31508 . - 0 ID=cds-WP_000189741.1;Parent=gene-C9E93_RS22505;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9E93_RS22505;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 31662 32555 . + . ID=gene-C9E93_RS22510;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9E93_RS22510;old_locus_tag=C9E93_23130 NZ_PYJV01000125.1 Protein Homology CDS 31662 32555 . + 0 ID=cds-WP_000828345.1;Parent=gene-C9E93_RS22510;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9E93_RS22510;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 32821 33567 . - . ID=gene-C9E93_RS22520;Name=C9E93_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22520;old_locus_tag=C9E93_23140 NZ_PYJV01000125.1 Protein Homology CDS 32821 33567 . - 0 ID=cds-WP_000669854.1;Parent=gene-C9E93_RS22520;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9E93_RS22520;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 33661 34296 . - . ID=gene-C9E93_RS22525;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=C9E93_RS22525;old_locus_tag=C9E93_23145 NZ_PYJV01000125.1 Protein Homology CDS 33661 34296 . - 0 ID=cds-WP_000626863.1;Parent=gene-C9E93_RS22525;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9E93_RS22525;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 34497 35357 . - . ID=gene-C9E93_RS22530;Name=C9E93_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22530;old_locus_tag=C9E93_23150 NZ_PYJV01000125.1 Protein Homology CDS 34497 35357 . - 0 ID=cds-WP_000389833.1;Parent=gene-C9E93_RS22530;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9E93_RS22530;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 35584 36663 . - . ID=gene-C9E93_RS22535;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9E93_RS22535;old_locus_tag=C9E93_23155 NZ_PYJV01000125.1 Protein Homology CDS 35584 36663 . - 0 ID=cds-WP_000034386.1;Parent=gene-C9E93_RS22535;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9E93_RS22535;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 36765 37928 . - . ID=gene-C9E93_RS22540;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9E93_RS22540;old_locus_tag=C9E93_23160 NZ_PYJV01000125.1 Protein Homology CDS 36765 37928 . - 0 ID=cds-WP_000111274.1;Parent=gene-C9E93_RS22540;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9E93_RS22540;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 37950 38996 . - . ID=gene-C9E93_RS22545;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9E93_RS22545;old_locus_tag=C9E93_23165 NZ_PYJV01000125.1 Protein Homology CDS 37950 38996 . - 0 ID=cds-WP_000218338.1;Parent=gene-C9E93_RS22545;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9E93_RS22545;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 39370 39795 . + . ID=gene-C9E93_RS22555;Name=C9E93_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22555;old_locus_tag=C9E93_23175 NZ_PYJV01000125.1 Protein Homology CDS 39370 39795 . + 0 ID=cds-WP_000218564.1;Parent=gene-C9E93_RS22555;Dbxref=GenBank:WP_000218564.1;Name=WP_000218564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9E93_RS22555;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218564.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 39821 40399 . + . ID=gene-C9E93_RS22560;Name=C9E93_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22560;old_locus_tag=C9E93_23180 NZ_PYJV01000125.1 Protein Homology CDS 39821 40399 . + 0 ID=cds-WP_080190285.1;Parent=gene-C9E93_RS22560;Dbxref=GenBank:WP_080190285.1;Name=WP_080190285.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9E93_RS22560;product=ECF transporter S component;protein_id=WP_080190285.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 40400 41107 . + . ID=gene-C9E93_RS22565;Name=C9E93_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22565;old_locus_tag=C9E93_23185 NZ_PYJV01000125.1 Protein Homology CDS 40400 41107 . + 0 ID=cds-WP_001524856.1;Parent=gene-C9E93_RS22565;Dbxref=GenBank:WP_001524856.1;Name=WP_001524856.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9E93_RS22565;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_001524856.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 41095 41772 . + . ID=gene-C9E93_RS22570;Name=C9E93_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22570;old_locus_tag=C9E93_23190 NZ_PYJV01000125.1 Protein Homology CDS 41095 41772 . + 0 ID=cds-WP_001517914.1;Parent=gene-C9E93_RS22570;Dbxref=GenBank:WP_001517914.1;Name=WP_001517914.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9E93_RS22570;product=ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 41766 42422 . + . ID=gene-C9E93_RS22575;Name=C9E93_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22575;old_locus_tag=C9E93_23195 NZ_PYJV01000125.1 Protein Homology CDS 41766 42422 . + 0 ID=cds-WP_020899194.1;Parent=gene-C9E93_RS22575;Dbxref=GenBank:WP_020899194.1;Name=WP_020899194.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9E93_RS22575;product=ABC transporter ATP-binding protein;protein_id=WP_020899194.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 42466 44457 . - . ID=gene-C9E93_RS22580;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E93_RS22580;old_locus_tag=C9E93_23200 NZ_PYJV01000125.1 Protein Homology CDS 42466 44457 . - 0 ID=cds-WP_080083340.1;Parent=gene-C9E93_RS22580;Dbxref=GenBank:WP_080083340.1;Name=WP_080083340.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9E93_RS22580;product=transketolase;protein_id=WP_080083340.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 44733 45491 . + . ID=gene-C9E93_RS22585;Name=C9E93_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22585;old_locus_tag=C9E93_23205 NZ_PYJV01000125.1 Protein Homology CDS 44733 45491 . + 0 ID=cds-WP_000701830.1;Parent=gene-C9E93_RS22585;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9E93_RS22585;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_PYJV01000125.1 RefSeq pseudogene 45504 45588 . - . ID=gene-C9E93_RS24240;Name=C9E93_RS24240;end_range=45588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24240;old_locus_tag=C9E93_23210;partial=true;pseudo=true;start_range=.,45504 NZ_PYJV01000125.1 Protein Homology CDS 45504 45588 . - 0 ID=cds-C9E93_RS24240;Parent=gene-C9E93_RS24240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=45588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E93_RS24240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,45504;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 45592 46512 . - . ID=gene-C9E93_RS22595;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9E93_RS22595;old_locus_tag=C9E93_23215 NZ_PYJV01000125.1 Protein Homology CDS 45592 46512 . - 0 ID=cds-WP_000105550.1;Parent=gene-C9E93_RS22595;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9E93_RS22595;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 46717 47673 . - . ID=gene-C9E93_RS22600;Name=C9E93_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22600;old_locus_tag=C9E93_23220 NZ_PYJV01000125.1 Protein Homology CDS 46717 47673 . - 0 ID=cds-WP_135400645.1;Parent=gene-C9E93_RS22600;Dbxref=GenBank:WP_135400645.1;Name=WP_135400645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E93_RS22600;product=alpha/beta fold hydrolase;protein_id=WP_135400645.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 47866 48360 . - . ID=gene-C9E93_RS22605;Name=C9E93_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22605;old_locus_tag=C9E93_23225 NZ_PYJV01000125.1 Protein Homology CDS 47866 48360 . - 0 ID=cds-WP_023198643.1;Parent=gene-C9E93_RS22605;Dbxref=GenBank:WP_023198643.1;Name=WP_023198643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=C9E93_RS22605;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023198643.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 48399 49406 . - . ID=gene-C9E93_RS22610;Name=C9E93_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22610;old_locus_tag=C9E93_23230 NZ_PYJV01000125.1 Protein Homology CDS 48399 49406 . - 0 ID=cds-WP_135370215.1;Parent=gene-C9E93_RS22610;Dbxref=GenBank:WP_135370215.1;Name=WP_135370215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9E93_RS22610;product=Ldh family oxidoreductase;protein_id=WP_135370215.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 49420 50436 . - . ID=gene-C9E93_RS22615;Name=C9E93_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22615;old_locus_tag=C9E93_23235 NZ_PYJV01000125.1 Protein Homology CDS 49420 50436 . - 0 ID=cds-WP_000853907.1;Parent=gene-C9E93_RS22615;Dbxref=GenBank:WP_000853907.1;Name=WP_000853907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9E93_RS22615;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853907.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 50439 51911 . - . ID=gene-C9E93_RS22620;Name=C9E93_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22620;old_locus_tag=C9E93_23240 NZ_PYJV01000125.1 Protein Homology CDS 50439 51911 . - 0 ID=cds-WP_135370216.1;Parent=gene-C9E93_RS22620;Dbxref=GenBank:WP_135370216.1;Name=WP_135370216.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9E93_RS22620;product=mannitol dehydrogenase family protein;protein_id=WP_135370216.1;transl_table=11 NZ_PYJV01000125.1 RefSeq pseudogene 52561 52830 . + . ID=gene-C9E93_RS24015;Name=C9E93_RS24015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24015;pseudo=true NZ_PYJV01000125.1 Protein Homology CDS 52561 52830 . + 0 ID=cds-C9E93_RS24015;Parent=gene-C9E93_RS24015;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=C9E93_RS24015;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 53145 53945 . - . ID=gene-C9E93_RS22630;Name=C9E93_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22630;old_locus_tag=C9E93_23250 NZ_PYJV01000125.1 Protein Homology CDS 53145 53945 . - 0 ID=cds-WP_001576357.1;Parent=gene-C9E93_RS22630;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9E93_RS22630;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 54099 54830 . - . ID=gene-C9E93_RS22635;Name=C9E93_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22635;old_locus_tag=C9E93_23255 NZ_PYJV01000125.1 Protein Homology CDS 54099 54830 . - 0 ID=cds-WP_000032795.1;Parent=gene-C9E93_RS22635;Dbxref=GenBank:WP_000032795.1;Name=WP_000032795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9E93_RS22635;product=hypothetical protein;protein_id=WP_000032795.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 54974 56950 . - . ID=gene-C9E93_RS22640;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9E93_RS22640;old_locus_tag=C9E93_23260 NZ_PYJV01000125.1 Protein Homology CDS 54974 56950 . - 0 ID=cds-WP_001278580.1;Parent=gene-C9E93_RS22640;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9E93_RS22640;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 56959 57090 . - . ID=gene-C9E93_RS22645;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9E93_RS22645;old_locus_tag=C9E93_23265 NZ_PYJV01000125.1 Protein Homology CDS 56959 57090 . - 0 ID=cds-WP_000729109.1;Parent=gene-C9E93_RS22645;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9E93_RS22645;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 57176 57325 . - . ID=gene-C9E93_RS24020;Name=C9E93_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24020 NZ_PYJV01000125.1 Protein Homology CDS 57176 57325 . - 0 ID=cds-WP_001751809.1;Parent=gene-C9E93_RS24020;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=C9E93_RS24020;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 57385 57684 . - . ID=gene-C9E93_RS22655;Name=C9E93_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22655;old_locus_tag=C9E93_23275 NZ_PYJV01000125.1 GeneMarkS-2+ CDS 57385 57684 . - 0 ID=cds-WP_001543499.1;Parent=gene-C9E93_RS22655;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS22655;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 57740 58894 . + . ID=gene-C9E93_RS22660;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9E93_RS22660;old_locus_tag=C9E93_23280 NZ_PYJV01000125.1 Protein Homology CDS 57740 58894 . + 0 ID=cds-WP_001062140.1;Parent=gene-C9E93_RS22660;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9E93_RS22660;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 59387 60781 . + . ID=gene-C9E93_RS22665;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=C9E93_RS22665;old_locus_tag=C9E93_23285 NZ_PYJV01000125.1 Protein Homology CDS 59387 60781 . + 0 ID=cds-WP_001113171.1;Parent=gene-C9E93_RS22665;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9E93_RS22665;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 60860 61357 . + . ID=gene-C9E93_RS22670;Name=C9E93_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22670;old_locus_tag=C9E93_23290 NZ_PYJV01000125.1 Protein Homology CDS 60860 61357 . + 0 ID=cds-WP_000856775.1;Parent=gene-C9E93_RS22670;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9E93_RS22670;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 61453 62160 . + . ID=gene-C9E93_RS22675;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9E93_RS22675;old_locus_tag=C9E93_23295 NZ_PYJV01000125.1 Protein Homology CDS 61453 62160 . + 0 ID=cds-WP_000286133.1;Parent=gene-C9E93_RS22675;Dbxref=GenBank:WP_000286133.1;Name=WP_000286133.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9E93_RS22675;product=deoxyribonuclease I;protein_id=WP_000286133.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 62237 62968 . + . ID=gene-C9E93_RS22680;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9E93_RS22680;old_locus_tag=C9E93_23300 NZ_PYJV01000125.1 Protein Homology CDS 62237 62968 . + 0 ID=cds-WP_001222488.1;Parent=gene-C9E93_RS22680;Dbxref=GenBank:WP_001222488.1;Name=WP_001222488.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9E93_RS22680;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222488.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 62988 63935 . + . ID=gene-C9E93_RS22685;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9E93_RS22685;old_locus_tag=C9E93_23305 NZ_PYJV01000125.1 Protein Homology CDS 62988 63935 . + 0 ID=cds-WP_000593248.1;Parent=gene-C9E93_RS22685;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9E93_RS22685;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 64151 64714 . + . ID=gene-C9E93_RS22690;Name=C9E93_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22690;old_locus_tag=C9E93_23310 NZ_PYJV01000125.1 Protein Homology CDS 64151 64714 . + 0 ID=cds-WP_001053167.1;Parent=gene-C9E93_RS22690;Dbxref=GenBank:WP_001053167.1;Name=WP_001053167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9E93_RS22690;product=YqgE/AlgH family protein;protein_id=WP_001053167.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 64714 65130 . + . ID=gene-C9E93_RS22695;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9E93_RS22695;old_locus_tag=C9E93_23315 NZ_PYJV01000125.1 Protein Homology CDS 64714 65130 . + 0 ID=cds-WP_135370122.1;Parent=gene-C9E93_RS22695;Dbxref=GenBank:WP_135370122.1;Name=WP_135370122.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9E93_RS22695;product=Holliday junction resolvase RuvX;protein_id=WP_135370122.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 65177 65863 . - . ID=gene-C9E93_RS22700;Name=C9E93_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22700;old_locus_tag=C9E93_23320 NZ_PYJV01000125.1 Protein Homology CDS 65177 65863 . - 0 ID=cds-WP_000098329.1;Parent=gene-C9E93_RS22700;Dbxref=GenBank:WP_000098329.1;Name=WP_000098329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9E93_RS22700;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098329.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 65996 66976 . - . ID=gene-C9E93_RS22705;Name=C9E93_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22705;old_locus_tag=C9E93_23325 NZ_PYJV01000125.1 Protein Homology CDS 65996 66976 . - 0 ID=cds-WP_135370121.1;Parent=gene-C9E93_RS22705;Dbxref=GenBank:WP_135370121.1;Name=WP_135370121.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9E93_RS22705;product=type IV pilus twitching motility protein PilT;protein_id=WP_135370121.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 66994 67698 . + . ID=gene-C9E93_RS22710;Name=C9E93_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22710;old_locus_tag=C9E93_23330 NZ_PYJV01000125.1 Protein Homology CDS 66994 67698 . + 0 ID=cds-WP_135370120.1;Parent=gene-C9E93_RS22710;Dbxref=GenBank:WP_135370120.1;Name=WP_135370120.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9E93_RS22710;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_135370120.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 67717 68283 . + . ID=gene-C9E93_RS22715;Name=C9E93_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22715;old_locus_tag=C9E93_23335 NZ_PYJV01000125.1 Protein Homology CDS 67717 68283 . + 0 ID=cds-WP_001094848.1;Parent=gene-C9E93_RS22715;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9E93_RS22715;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 68280 68570 . + . ID=gene-C9E93_RS22720;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9E93_RS22720;old_locus_tag=C9E93_23340 NZ_PYJV01000125.1 Protein Homology CDS 68280 68570 . + 0 ID=cds-WP_001277203.1;Parent=gene-C9E93_RS22720;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9E93_RS22720;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 68578 69171 . + . ID=gene-C9E93_RS22725;Name=C9E93_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22725;old_locus_tag=C9E93_23345 NZ_PYJV01000125.1 Protein Homology CDS 68578 69171 . + 0 ID=cds-WP_001174769.1;Parent=gene-C9E93_RS22725;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9E93_RS22725;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 69164 70300 . + . ID=gene-C9E93_RS22730;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9E93_RS22730;old_locus_tag=C9E93_23350 NZ_PYJV01000125.1 Protein Homology CDS 69164 70300 . + 0 ID=cds-WP_001096530.1;Parent=gene-C9E93_RS22730;Dbxref=GenBank:WP_001096530.1;Name=WP_001096530.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9E93_RS22730;product=radical SAM family heme chaperone HemW;protein_id=WP_001096530.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 70392 71399 . - . ID=gene-C9E93_RS22735;Name=C9E93_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22735;old_locus_tag=C9E93_23355 NZ_PYJV01000125.1 Protein Homology CDS 70392 71399 . - 0 ID=cds-WP_023233416.1;Parent=gene-C9E93_RS22735;Dbxref=GenBank:WP_023233416.1;Name=WP_023233416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9E93_RS22735;product=DUF1202 domain-containing protein;protein_id=WP_023233416.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 71532 72578 . - . ID=gene-C9E93_RS22740;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9E93_RS22740;old_locus_tag=C9E93_23360 NZ_PYJV01000125.1 Protein Homology CDS 71532 72578 . - 0 ID=cds-WP_000394189.1;Parent=gene-C9E93_RS22740;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9E93_RS22740;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 72767 73486 . - . ID=gene-C9E93_RS22745;Name=C9E93_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22745;old_locus_tag=C9E93_23365 NZ_PYJV01000125.1 Protein Homology CDS 72767 73486 . - 0 ID=cds-WP_000984827.1;Parent=gene-C9E93_RS22745;Dbxref=GenBank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9E93_RS22745;product=DUF2884 domain-containing protein;protein_id=WP_000984827.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 73536 73862 . - . ID=gene-C9E93_RS22750;Name=C9E93_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22750;old_locus_tag=C9E93_23370 NZ_PYJV01000125.1 Protein Homology CDS 73536 73862 . - 0 ID=cds-WP_001107574.1;Parent=gene-C9E93_RS22750;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9E93_RS22750;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 73862 74581 . - . ID=gene-C9E93_RS22755;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9E93_RS22755;old_locus_tag=C9E93_23375 NZ_PYJV01000125.1 Protein Homology CDS 73862 74581 . - 0 ID=cds-WP_000786893.1;Parent=gene-C9E93_RS22755;Dbxref=GenBank:WP_000786893.1;Name=WP_000786893.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=C9E93_RS22755;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786893.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 74736 75788 . + . ID=gene-C9E93_RS22760;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9E93_RS22760;old_locus_tag=C9E93_23385 NZ_PYJV01000125.1 Protein Homology CDS 74736 75788 . + 0 ID=cds-WP_001148955.1;Parent=gene-C9E93_RS22760;Dbxref=GenBank:WP_001148955.1;Name=WP_001148955.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9E93_RS22760;product=A/G-specific adenine glycosylase;protein_id=WP_001148955.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 75816 76091 . + . ID=gene-C9E93_RS22765;Name=C9E93_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22765;old_locus_tag=C9E93_23390 NZ_PYJV01000125.1 Protein Homology CDS 75816 76091 . + 0 ID=cds-WP_000091706.1;Parent=gene-C9E93_RS22765;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9E93_RS22765;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 76204 77289 . + . ID=gene-C9E93_RS22770;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9E93_RS22770;old_locus_tag=C9E93_23395 NZ_PYJV01000125.1 Protein Homology CDS 76204 77289 . + 0 ID=cds-WP_000976289.1;Parent=gene-C9E93_RS22770;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9E93_RS22770;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 77506 78762 . + . ID=gene-C9E93_RS22775;Name=C9E93_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22775;old_locus_tag=C9E93_23400 NZ_PYJV01000125.1 Protein Homology CDS 77506 78762 . + 0 ID=cds-WP_001049803.1;Parent=gene-C9E93_RS22775;Dbxref=GenBank:WP_001049803.1;Name=WP_001049803.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9E93_RS22775;product=nucleoside permease;protein_id=WP_001049803.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 78824 80959 . - . ID=gene-C9E93_RS22780;Name=C9E93_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22780;old_locus_tag=C9E93_23405 NZ_PYJV01000125.1 Protein Homology CDS 78824 80959 . - 0 ID=cds-WP_135370119.1;Parent=gene-C9E93_RS22780;Dbxref=GenBank:WP_135370119.1;Name=WP_135370119.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9E93_RS22780;product=ornithine decarboxylase;protein_id=WP_135370119.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 81384 82094 . + . ID=gene-C9E93_RS22785;Name=C9E93_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22785;old_locus_tag=C9E93_23415 NZ_PYJV01000125.1 Protein Homology CDS 81384 82094 . + 0 ID=cds-WP_135370118.1;Parent=gene-C9E93_RS22785;Dbxref=GenBank:WP_135370118.1;Name=WP_135370118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9E93_RS22785;product=DUF554 domain-containing protein;protein_id=WP_135370118.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 82200 82275 . + . ID=gene-C9E93_RS22790;Name=C9E93_RS22790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS22790;old_locus_tag=C9E93_23420 NZ_PYJV01000125.1 tRNAscan-SE tRNA 82200 82275 . + . ID=rna-C9E93_RS22790;Parent=gene-C9E93_RS22790;anticodon=(pos:82233..82235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22790;product=tRNA-Phe NZ_PYJV01000125.1 tRNAscan-SE exon 82200 82275 . + . ID=exon-C9E93_RS22790-1;Parent=rna-C9E93_RS22790;anticodon=(pos:82233..82235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22790;product=tRNA-Phe NZ_PYJV01000125.1 RefSeq gene 82487 83449 . - . ID=gene-C9E93_RS22795;Name=C9E93_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22795;old_locus_tag=C9E93_23425 NZ_PYJV01000125.1 Protein Homology CDS 82487 83449 . - 0 ID=cds-WP_080190462.1;Parent=gene-C9E93_RS22795;Dbxref=GenBank:WP_080190462.1;Name=WP_080190462.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173655.1;locus_tag=C9E93_RS22795;product=tyrosine-type recombinase/integrase;protein_id=WP_080190462.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 83461 84843 . - . ID=gene-C9E93_RS22800;Name=C9E93_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22800;old_locus_tag=C9E93_23430 NZ_PYJV01000125.1 Protein Homology CDS 83461 84843 . - 0 ID=cds-WP_135370117.1;Parent=gene-C9E93_RS22800;Dbxref=GenBank:WP_135370117.1;Name=WP_135370117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640265.1;locus_tag=C9E93_RS22800;product=TraI domain-containing protein;protein_id=WP_135370117.1;transl_table=11 NZ_PYJV01000125.1 RefSeq gene 85204 85695 . + . ID=gene-C9E93_RS22805;Name=C9E93_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22805;old_locus_tag=C9E93_23435 NZ_PYJV01000125.1 GeneMarkS-2+ CDS 85204 85695 . + 0 ID=cds-WP_057935477.1;Parent=gene-C9E93_RS22805;Dbxref=GenBank:WP_057935477.1;Name=WP_057935477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS22805;product=hypothetical protein;protein_id=WP_057935477.1;transl_table=11 NZ_PYJV01000125.1 RefSeq pseudogene 85769 85948 . - . ID=gene-C9E93_RS22810;Name=C9E93_RS22810;end_range=85948,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS22810;old_locus_tag=C9E93_23440;partial=true;pseudo=true NZ_PYJV01000125.1 Protein Homology CDS 85769 85948 . - 0 ID=cds-C9E93_RS22810;Parent=gene-C9E93_RS22810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=85948,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163274.1;locus_tag=C9E93_RS22810;partial=true;product=zincin-like metallopeptidase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000110.1 1 212068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000110.1 RefSeq region 1 212068 . + . ID=NZ_PYJV01000110.1:1..212068;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000110.1 RefSeq gene 392 1246 . - . ID=gene-C9E93_RS19090;Name=C9E93_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19090;old_locus_tag=C9E93_19585 NZ_PYJV01000110.1 Protein Homology CDS 392 1246 . - 0 ID=cds-WP_047606735.1;Parent=gene-C9E93_RS19090;Dbxref=GenBank:WP_047606735.1;Name=WP_047606735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018584.6;locus_tag=C9E93_RS19090;product=DUF1266 domain-containing protein;protein_id=WP_047606735.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 1293 2081 . - . ID=gene-C9E93_RS19095;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=C9E93_RS19095;old_locus_tag=C9E93_19590 NZ_PYJV01000110.1 Protein Homology CDS 1293 2081 . - 0 ID=cds-WP_039590712.1;Parent=gene-C9E93_RS19095;Dbxref=GenBank:WP_039590712.1;Name=WP_039590712.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9E93_RS19095;product=putative envelope lipoprotein EnvF;protein_id=WP_039590712.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 2571 2810 . - . ID=gene-C9E93_RS19100;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9E93_RS19100;old_locus_tag=C9E93_19600 NZ_PYJV01000110.1 Protein Homology CDS 2571 2810 . - 0 ID=cds-WP_000497451.1;Parent=gene-C9E93_RS19100;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9E93_RS19100;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 2991 3512 . - . ID=gene-C9E93_RS19105;Name=C9E93_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19105;old_locus_tag=C9E93_19605 NZ_PYJV01000110.1 Protein Homology CDS 2991 3512 . - 0 ID=cds-WP_001589112.1;Parent=gene-C9E93_RS19105;Dbxref=GenBank:WP_001589112.1;Name=WP_001589112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9E93_RS19105;product=RICIN domain-containing protein;protein_id=WP_001589112.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 3915 4127 . - . ID=gene-C9E93_RS19110;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9E93_RS19110;old_locus_tag=C9E93_19610 NZ_PYJV01000110.1 Protein Homology CDS 3915 4127 . - 0 ID=cds-WP_001537306.1;Parent=gene-C9E93_RS19110;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9E93_RS19110;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 4259 4522 . - . ID=gene-C9E93_RS19115;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9E93_RS19115;old_locus_tag=C9E93_19615 NZ_PYJV01000110.1 Protein Homology CDS 4259 4522 . - 0 ID=cds-WP_058821252.1;Parent=gene-C9E93_RS19115;Dbxref=GenBank:WP_058821252.1;Name=WP_058821252.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9E93_RS19115;product=virulence protein PagD;protein_id=WP_058821252.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 5330 5887 . + . ID=gene-C9E93_RS19130;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9E93_RS19130;old_locus_tag=C9E93_19630 NZ_PYJV01000110.1 Protein Homology CDS 5330 5887 . + 0 ID=cds-WP_000789471.1;Parent=gene-C9E93_RS19130;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9E93_RS19130;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 6278 6354 . + . ID=gene-C9E93_RS19135;Name=C9E93_RS19135;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS19135;old_locus_tag=C9E93_19635 NZ_PYJV01000110.1 tRNAscan-SE tRNA 6278 6354 . + . ID=rna-C9E93_RS19135;Parent=gene-C9E93_RS19135;anticodon=(pos:6312..6314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19135;product=tRNA-Arg NZ_PYJV01000110.1 tRNAscan-SE exon 6278 6354 . + . ID=exon-C9E93_RS19135-1;Parent=rna-C9E93_RS19135;anticodon=(pos:6312..6314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19135;product=tRNA-Arg NZ_PYJV01000110.1 RefSeq gene 7109 7453 . - . ID=gene-C9E93_RS19140;Name=C9E93_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19140;old_locus_tag=C9E93_19640 NZ_PYJV01000110.1 Protein Homology CDS 7109 7453 . - 0 ID=cds-WP_000977728.1;Parent=gene-C9E93_RS19140;Dbxref=GenBank:WP_000977728.1;Name=WP_000977728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9E93_RS19140;product=c-type lysozyme inhibitor;protein_id=WP_000977728.1;transl_table=11 NZ_PYJV01000110.1 RefSeq pseudogene 8156 8428 . + . ID=gene-C9E93_RS19150;Name=C9E93_RS19150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS19150;old_locus_tag=C9E93_19650;pseudo=true NZ_PYJV01000110.1 Protein Homology CDS 8156 8428 . + 0 ID=cds-C9E93_RS19150;Parent=gene-C9E93_RS19150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9E93_RS19150;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 8580 9047 . + . ID=gene-C9E93_RS19155;Name=C9E93_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19155;old_locus_tag=C9E93_19655 NZ_PYJV01000110.1 Protein Homology CDS 8580 9047 . + 0 ID=cds-WP_001218118.1;Parent=gene-C9E93_RS19155;Dbxref=GenBank:WP_001218118.1;Name=WP_001218118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9E93_RS19155;product=Hsp20 family protein;protein_id=WP_001218118.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 9386 10429 . + . ID=gene-C9E93_RS19165;Name=C9E93_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19165;old_locus_tag=C9E93_19665 NZ_PYJV01000110.1 Protein Homology CDS 9386 10429 . + 0 ID=cds-WP_135370662.1;Parent=gene-C9E93_RS19165;Dbxref=GenBank:WP_135370662.1;Name=WP_135370662.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9E93_RS19165;product=sialidase family protein;protein_id=WP_135370662.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 10512 11042 . - . ID=gene-C9E93_RS19170;Name=C9E93_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19170;old_locus_tag=C9E93_19670 NZ_PYJV01000110.1 Protein Homology CDS 10512 11042 . - 0 ID=cds-WP_000929974.1;Parent=gene-C9E93_RS19170;Dbxref=GenBank:WP_000929974.1;Name=WP_000929974.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9E93_RS19170;product=cytochrome b;protein_id=WP_000929974.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 11191 11505 . - . ID=gene-C9E93_RS19175;Name=C9E93_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19175;old_locus_tag=C9E93_19675 NZ_PYJV01000110.1 Protein Homology CDS 11191 11505 . - 0 ID=cds-WP_000182479.1;Parent=gene-C9E93_RS19175;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9E93_RS19175;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 12187 13821 . + . ID=gene-C9E93_RS19180;Name=C9E93_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19180;old_locus_tag=C9E93_19680 NZ_PYJV01000110.1 Protein Homology CDS 12187 13821 . + 0 ID=cds-WP_000946086.1;Parent=gene-C9E93_RS19180;Dbxref=GenBank:WP_000946086.1;Name=WP_000946086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9E93_RS19180;product=ABC transporter substrate-binding protein;protein_id=WP_000946086.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 13821 14795 . + . ID=gene-C9E93_RS19185;Name=C9E93_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19185;old_locus_tag=C9E93_19685 NZ_PYJV01000110.1 Protein Homology CDS 13821 14795 . + 0 ID=cds-WP_001533345.1;Parent=gene-C9E93_RS19185;Dbxref=GenBank:WP_001533345.1;Name=WP_001533345.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9E93_RS19185;product=ABC transporter permease;protein_id=WP_001533345.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 14785 15597 . + . ID=gene-C9E93_RS19190;Name=C9E93_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19190;old_locus_tag=C9E93_19690 NZ_PYJV01000110.1 Protein Homology CDS 14785 15597 . + 0 ID=cds-WP_000966636.1;Parent=gene-C9E93_RS19190;Dbxref=GenBank:WP_000966636.1;Name=WP_000966636.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9E93_RS19190;product=ABC transporter permease;protein_id=WP_000966636.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 15591 16388 . + . ID=gene-C9E93_RS19195;Name=C9E93_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19195;old_locus_tag=C9E93_19695 NZ_PYJV01000110.1 Protein Homology CDS 15591 16388 . + 0 ID=cds-WP_000950212.1;Parent=gene-C9E93_RS19195;Dbxref=GenBank:WP_000950212.1;Name=WP_000950212.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9E93_RS19195;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950212.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 16382 16972 . + . ID=gene-C9E93_RS19200;Name=C9E93_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19200;old_locus_tag=C9E93_19700 NZ_PYJV01000110.1 Protein Homology CDS 16382 16972 . + 0 ID=cds-WP_000947459.1;Parent=gene-C9E93_RS19200;Dbxref=GenBank:WP_000947459.1;Name=WP_000947459.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9E93_RS19200;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947459.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 17054 18187 . - . ID=gene-C9E93_RS19205;Name=C9E93_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19205;old_locus_tag=C9E93_19705 NZ_PYJV01000110.1 Protein Homology CDS 17054 18187 . - 0 ID=cds-WP_000456065.1;Parent=gene-C9E93_RS19205;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9E93_RS19205;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 18381 18707 . + . ID=gene-C9E93_RS19210;Name=C9E93_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19210;old_locus_tag=C9E93_19710 NZ_PYJV01000110.1 Protein Homology CDS 18381 18707 . + 0 ID=cds-WP_001183699.1;Parent=gene-C9E93_RS19210;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9E93_RS19210;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 18716 18792 . + . ID=gene-C9E93_RS19215;Name=C9E93_RS19215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS19215;old_locus_tag=C9E93_19715 NZ_PYJV01000110.1 tRNAscan-SE tRNA 18716 18792 . + . ID=rna-C9E93_RS19215;Parent=gene-C9E93_RS19215;anticodon=(pos:18750..18752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19215;product=tRNA-Arg NZ_PYJV01000110.1 tRNAscan-SE exon 18716 18792 . + . ID=exon-C9E93_RS19215-1;Parent=rna-C9E93_RS19215;anticodon=(pos:18750..18752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19215;product=tRNA-Arg NZ_PYJV01000110.1 RefSeq gene 18904 19551 . + . ID=gene-C9E93_RS19220;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9E93_RS19220;old_locus_tag=C9E93_19720 NZ_PYJV01000110.1 Protein Homology CDS 18904 19551 . + 0 ID=cds-WP_167851660.1;Parent=gene-C9E93_RS19220;Dbxref=GenBank:WP_167851660.1;Name=WP_167851660.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9E93_RS19220;product=metal-binding protein ZinT;protein_id=WP_167851660.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 19659 20447 . + . ID=gene-C9E93_RS19225;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9E93_RS19225;old_locus_tag=C9E93_19725 NZ_PYJV01000110.1 Protein Homology CDS 19659 20447 . + 0 ID=cds-WP_023993480.1;Parent=gene-C9E93_RS19225;Dbxref=GenBank:WP_023993480.1;Name=WP_023993480.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9E93_RS19225;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_023993480.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 20592 21185 . + . ID=gene-C9E93_RS19230;Name=C9E93_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19230;old_locus_tag=C9E93_19730 NZ_PYJV01000110.1 Protein Homology CDS 20592 21185 . + 0 ID=cds-WP_001534706.1;Parent=gene-C9E93_RS19230;Dbxref=GenBank:WP_001534706.1;Name=WP_001534706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9E93_RS19230;product=helix-turn-helix domain-containing protein;protein_id=WP_001534706.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 21254 22102 . + . ID=gene-C9E93_RS19235;Name=C9E93_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19235;old_locus_tag=C9E93_19735 NZ_PYJV01000110.1 Protein Homology CDS 21254 22102 . + 0 ID=cds-WP_000190263.1;Parent=gene-C9E93_RS19235;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9E93_RS19235;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 22357 22605 . - . ID=gene-C9E93_RS19240;Name=C9E93_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19240;old_locus_tag=C9E93_19745 NZ_PYJV01000110.1 Protein Homology CDS 22357 22605 . - 0 ID=cds-WP_000208086.1;Parent=gene-C9E93_RS19240;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9E93_RS19240;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_PYJV01000110.1 RefSeq pseudogene 22684 22838 . - . ID=gene-C9E93_RS23990;Name=C9E93_RS23990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23990;pseudo=true NZ_PYJV01000110.1 Protein Homology CDS 22684 22838 . - 0 ID=cds-C9E93_RS23990;Parent=gene-C9E93_RS23990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9E93_RS23990;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 22921 23466 . + . ID=gene-C9E93_RS19245;Name=C9E93_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19245;old_locus_tag=C9E93_19750 NZ_PYJV01000110.1 Protein Homology CDS 22921 23466 . + 0 ID=cds-WP_039590693.1;Parent=gene-C9E93_RS19245;Dbxref=GenBank:WP_039590693.1;Name=WP_039590693.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9E93_RS19245;product=chorismate mutase;protein_id=WP_039590693.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 23663 24301 . + . ID=gene-C9E93_RS19250;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9E93_RS19250;old_locus_tag=C9E93_19755 NZ_PYJV01000110.1 Protein Homology CDS 23663 24301 . + 0 ID=cds-WP_000457190.1;Parent=gene-C9E93_RS19250;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9E93_RS19250;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 24474 24836 . + . ID=gene-C9E93_RS19255;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9E93_RS19255;old_locus_tag=C9E93_19765 NZ_PYJV01000110.1 Protein Homology CDS 24474 24836 . + 0 ID=cds-WP_001248993.1;Parent=gene-C9E93_RS19255;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9E93_RS19255;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 24839 25021 . + . ID=gene-C9E93_RS19260;Name=C9E93_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19260;old_locus_tag=C9E93_19770 NZ_PYJV01000110.1 Protein Homology CDS 24839 25021 . + 0 ID=cds-WP_000513733.1;Parent=gene-C9E93_RS19260;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9E93_RS19260;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 25251 25892 . + . ID=gene-C9E93_RS19265;Name=C9E93_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19265;old_locus_tag=C9E93_19775 NZ_PYJV01000110.1 Protein Homology CDS 25251 25892 . + 0 ID=cds-WP_023203468.1;Parent=gene-C9E93_RS19265;Dbxref=GenBank:WP_023203468.1;Name=WP_023203468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9E93_RS19265;product=nitric oxide reductase;protein_id=WP_023203468.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 26206 26454 . + . ID=gene-C9E93_RS19275;Name=C9E93_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19275;old_locus_tag=C9E93_19785 NZ_PYJV01000110.1 Protein Homology CDS 26206 26454 . + 0 ID=cds-WP_000512149.1;Parent=gene-C9E93_RS19275;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9E93_RS19275;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 26593 26691 . - . ID=gene-C9E93_RS19280;Name=C9E93_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19280;old_locus_tag=C9E93_19790 NZ_PYJV01000110.1 Protein Homology CDS 26593 26691 . - 0 ID=cds-WP_001589065.1;Parent=gene-C9E93_RS19280;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9E93_RS19280;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 26887 27138 . + . ID=gene-C9E93_RS19285;Name=C9E93_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19285;old_locus_tag=C9E93_19795 NZ_PYJV01000110.1 Protein Homology CDS 26887 27138 . + 0 ID=cds-WP_000673492.1;Parent=gene-C9E93_RS19285;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9E93_RS19285;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 27207 27518 . + . ID=gene-C9E93_RS19290;Name=C9E93_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19290;old_locus_tag=C9E93_19800 NZ_PYJV01000110.1 Protein Homology CDS 27207 27518 . + 0 ID=cds-WP_000487129.1;Parent=gene-C9E93_RS19290;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9E93_RS19290;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 27504 27851 . - . ID=gene-C9E93_RS19295;Name=C9E93_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19295;old_locus_tag=C9E93_19805 NZ_PYJV01000110.1 Protein Homology CDS 27504 27851 . - 0 ID=cds-WP_001222534.1;Parent=gene-C9E93_RS19295;Dbxref=GenBank:WP_001222534.1;Name=WP_001222534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9E93_RS19295;product=DUF488 domain-containing protein;protein_id=WP_001222534.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 27970 29154 . - . ID=gene-C9E93_RS19300;Name=C9E93_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19300;old_locus_tag=C9E93_19810 NZ_PYJV01000110.1 Protein Homology CDS 27970 29154 . - 0 ID=cds-WP_135370551.1;Parent=gene-C9E93_RS19300;Dbxref=GenBank:WP_135370551.1;Name=WP_135370551.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9E93_RS19300;product=CynX/NimT family MFS transporter;protein_id=WP_135370551.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 29255 30049 . + . ID=gene-C9E93_RS19305;Name=C9E93_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19305;old_locus_tag=C9E93_19815 NZ_PYJV01000110.1 Protein Homology CDS 29255 30049 . + 0 ID=cds-WP_000579793.1;Parent=gene-C9E93_RS19305;Dbxref=GenBank:WP_000579793.1;Name=WP_000579793.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9E93_RS19305;product=AraC family transcriptional regulator;protein_id=WP_000579793.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 30029 30475 . - . ID=gene-C9E93_RS19310;Name=C9E93_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19310;old_locus_tag=C9E93_19820 NZ_PYJV01000110.1 Protein Homology CDS 30029 30475 . - 0 ID=cds-WP_000460698.1;Parent=gene-C9E93_RS19310;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9E93_RS19310;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 30681 30788 . + . ID=gene-C9E93_RS19315;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=C9E93_RS19315;old_locus_tag=C9E93_19825 NZ_PYJV01000110.1 Protein Homology CDS 30681 30788 . + 0 ID=cds-WP_000272239.1;Parent=gene-C9E93_RS19315;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9E93_RS19315;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 30933 31451 . - . ID=gene-C9E93_RS19320;Name=C9E93_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19320;old_locus_tag=C9E93_19835 NZ_PYJV01000110.1 Protein Homology CDS 30933 31451 . - 0 ID=cds-WP_167851661.1;Parent=gene-C9E93_RS19320;Dbxref=GenBank:WP_167851661.1;Name=WP_167851661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9E93_RS19320;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_167851661.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 31501 32994 . - . ID=gene-C9E93_RS19325;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9E93_RS19325;old_locus_tag=C9E93_19840 NZ_PYJV01000110.1 Protein Homology CDS 31501 32994 . - 0 ID=cds-WP_135370490.1;Parent=gene-C9E93_RS19325;Dbxref=GenBank:WP_135370490.1;Name=WP_135370490.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9E93_RS19325;product=diguanylate cyclase DgcJ;protein_id=WP_135370490.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 33450 34736 . - . ID=gene-C9E93_RS19330;Name=C9E93_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19330;old_locus_tag=C9E93_19845 NZ_PYJV01000110.1 Protein Homology CDS 33450 34736 . - 0 ID=cds-WP_000219714.1;Parent=gene-C9E93_RS19330;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9E93_RS19330;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 34859 36793 . - . ID=gene-C9E93_RS19335;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9E93_RS19335;old_locus_tag=C9E93_19850 NZ_PYJV01000110.1 Protein Homology CDS 34859 36793 . - 0 ID=cds-WP_001518010.1;Parent=gene-C9E93_RS19335;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=C9E93_RS19335;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 37221 37967 . + . ID=gene-C9E93_RS19340;Name=C9E93_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19340;old_locus_tag=C9E93_19855 NZ_PYJV01000110.1 Protein Homology CDS 37221 37967 . + 0 ID=cds-WP_000163762.1;Parent=gene-C9E93_RS19340;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9E93_RS19340;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 38257 39453 . + . ID=gene-C9E93_RS19345;Name=C9E93_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19345;old_locus_tag=C9E93_19860 NZ_PYJV01000110.1 Protein Homology CDS 38257 39453 . + 0 ID=cds-WP_023233856.1;Parent=gene-C9E93_RS19345;Dbxref=GenBank:WP_023233856.1;Name=WP_023233856.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9E93_RS19345;product=anaerobic sulfatase maturase;protein_id=WP_023233856.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 39550 40407 . + . ID=gene-C9E93_RS19350;Name=C9E93_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19350;old_locus_tag=C9E93_19865 NZ_PYJV01000110.1 Protein Homology CDS 39550 40407 . + 0 ID=cds-WP_000843751.1;Parent=gene-C9E93_RS19350;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9E93_RS19350;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 40506 41390 . - . ID=gene-C9E93_RS19355;Name=C9E93_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19355;old_locus_tag=C9E93_19870 NZ_PYJV01000110.1 Protein Homology CDS 40506 41390 . - 0 ID=cds-WP_000608652.1;Parent=gene-C9E93_RS19355;Dbxref=GenBank:WP_000608652.1;Name=WP_000608652.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9E93_RS19355;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608652.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 41724 42719 . - . ID=gene-C9E93_RS19365;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9E93_RS19365;old_locus_tag=C9E93_19880 NZ_PYJV01000110.1 Protein Homology CDS 41724 42719 . - 0 ID=cds-WP_000153505.1;Parent=gene-C9E93_RS19365;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9E93_RS19365;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 43061 43474 . + . ID=gene-C9E93_RS19370;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9E93_RS19370;old_locus_tag=C9E93_19885 NZ_PYJV01000110.1 Protein Homology CDS 43061 43474 . + 0 ID=cds-WP_001519539.1;Parent=gene-C9E93_RS19370;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9E93_RS19370;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 43516 43794 . + . ID=gene-C9E93_RS19375;Name=C9E93_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19375;old_locus_tag=C9E93_19890 NZ_PYJV01000110.1 Protein Homology CDS 43516 43794 . + 0 ID=cds-WP_001046864.1;Parent=gene-C9E93_RS19375;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9E93_RS19375;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_PYJV01000110.1 RefSeq pseudogene 43970 44393 . - . ID=gene-C9E93_RS23995;Name=C9E93_RS23995;end_range=44393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23995;partial=true;pseudo=true;start_range=.,43970 NZ_PYJV01000110.1 Protein Homology CDS 43970 44393 . - 0 ID=cds-C9E93_RS23995;Parent=gene-C9E93_RS23995;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;end_range=44393,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=C9E93_RS23995;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,43970;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 44689 45765 . + . ID=gene-C9E93_RS19385;Name=C9E93_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19385;old_locus_tag=C9E93_19900 NZ_PYJV01000110.1 Protein Homology CDS 44689 45765 . + 0 ID=cds-WP_000645183.1;Parent=gene-C9E93_RS19385;Dbxref=GenBank:WP_000645183.1;Name=WP_000645183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9E93_RS19385;product=zinc-binding dehydrogenase;protein_id=WP_000645183.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 45792 47171 . + . ID=gene-C9E93_RS19390;Name=C9E93_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19390;old_locus_tag=C9E93_19905 NZ_PYJV01000110.1 Protein Homology CDS 45792 47171 . + 0 ID=cds-WP_000435326.1;Parent=gene-C9E93_RS19390;Dbxref=GenBank:WP_000435326.1;Name=WP_000435326.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9E93_RS19390;product=MFS transporter;protein_id=WP_000435326.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 47182 48225 . + . ID=gene-C9E93_RS19395;Name=C9E93_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19395;old_locus_tag=C9E93_19910 NZ_PYJV01000110.1 Protein Homology CDS 47182 48225 . + 0 ID=cds-WP_001624385.1;Parent=gene-C9E93_RS19395;Dbxref=GenBank:WP_001624385.1;Name=WP_001624385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9E93_RS19395;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_001624385.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 48247 49083 . + . ID=gene-C9E93_RS19400;Name=C9E93_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19400;old_locus_tag=C9E93_19915 NZ_PYJV01000110.1 Protein Homology CDS 48247 49083 . + 0 ID=cds-WP_000878867.1;Parent=gene-C9E93_RS19400;Dbxref=GenBank:WP_000878867.1;Name=WP_000878867.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9E93_RS19400;product=ketose-bisphosphate aldolase;protein_id=WP_000878867.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 49088 50035 . + . ID=gene-C9E93_RS19405;Name=C9E93_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19405;old_locus_tag=C9E93_19920 NZ_PYJV01000110.1 Protein Homology CDS 49088 50035 . + 0 ID=cds-WP_000343332.1;Parent=gene-C9E93_RS19405;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=C9E93_RS19405;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 50045 51028 . + . ID=gene-C9E93_RS19410;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=C9E93_RS19410;old_locus_tag=C9E93_19925 NZ_PYJV01000110.1 Protein Homology CDS 50045 51028 . + 0 ID=cds-WP_135370554.1;Parent=gene-C9E93_RS19410;Dbxref=GenBank:WP_135370554.1;Name=WP_135370554.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9E93_RS19410;product=NADH-dependent methylglyoxal reductase;protein_id=WP_135370554.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 51158 51916 . + . ID=gene-C9E93_RS19415;Name=C9E93_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19415;old_locus_tag=C9E93_19930 NZ_PYJV01000110.1 Protein Homology CDS 51158 51916 . + 0 ID=cds-WP_000719104.1;Parent=gene-C9E93_RS19415;Dbxref=GenBank:WP_000719104.1;Name=WP_000719104.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=C9E93_RS19415;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719104.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 52052 53410 . + . ID=gene-C9E93_RS19420;Name=C9E93_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19420;old_locus_tag=C9E93_19935 NZ_PYJV01000110.1 Protein Homology CDS 52052 53410 . + 0 ID=cds-WP_023209894.1;Parent=gene-C9E93_RS19420;Dbxref=GenBank:WP_023209894.1;Name=WP_023209894.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=C9E93_RS19420;product=MFS transporter;protein_id=WP_023209894.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 53513 54169 . - . ID=gene-C9E93_RS19425;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9E93_RS19425;old_locus_tag=C9E93_19940 NZ_PYJV01000110.1 Protein Homology CDS 53513 54169 . - 0 ID=cds-WP_000184707.1;Parent=gene-C9E93_RS19425;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9E93_RS19425;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 54196 55212 . - . ID=gene-C9E93_RS19430;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9E93_RS19430;old_locus_tag=C9E93_19945 NZ_PYJV01000110.1 Protein Homology CDS 54196 55212 . - 0 ID=cds-WP_001170134.1;Parent=gene-C9E93_RS19430;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9E93_RS19430;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 55308 57164 . - . ID=gene-C9E93_RS19435;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9E93_RS19435;old_locus_tag=C9E93_19950 NZ_PYJV01000110.1 Protein Homology CDS 55308 57164 . - 0 ID=cds-WP_001259874.1;Parent=gene-C9E93_RS19435;Dbxref=GenBank:WP_001259874.1;Name=WP_001259874.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9E93_RS19435;product=signal peptide peptidase SppA;protein_id=WP_001259874.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 57338 57889 . + . ID=gene-C9E93_RS19440;Name=C9E93_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19440;old_locus_tag=C9E93_19955 NZ_PYJV01000110.1 Protein Homology CDS 57338 57889 . + 0 ID=cds-WP_031605404.1;Parent=gene-C9E93_RS19440;Dbxref=GenBank:WP_031605404.1;Name=WP_031605404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9E93_RS19440;product=NAD(P)H nitroreductase;protein_id=WP_031605404.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 58007 59050 . + . ID=gene-C9E93_RS19445;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9E93_RS19445;old_locus_tag=C9E93_19960 NZ_PYJV01000110.1 Protein Homology CDS 58007 59050 . + 0 ID=cds-WP_001294900.1;Parent=gene-C9E93_RS19445;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9E93_RS19445;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 59055 61004 . + . ID=gene-C9E93_RS19450;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9E93_RS19450;old_locus_tag=C9E93_19965 NZ_PYJV01000110.1 Protein Homology CDS 59055 61004 . + 0 ID=cds-WP_001235874.1;Parent=gene-C9E93_RS19450;Dbxref=GenBank:WP_001235874.1;Name=WP_001235874.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9E93_RS19450;product=DNA topoisomerase III;protein_id=WP_001235874.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 61034 62377 . - . ID=gene-C9E93_RS19455;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9E93_RS19455;old_locus_tag=C9E93_19970 NZ_PYJV01000110.1 Protein Homology CDS 61034 62377 . - 0 ID=cds-WP_000372865.1;Parent=gene-C9E93_RS19455;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9E93_RS19455;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 62616 62891 . + . ID=gene-C9E93_RS19460;Name=C9E93_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19460;old_locus_tag=C9E93_19975 NZ_PYJV01000110.1 Protein Homology CDS 62616 62891 . + 0 ID=cds-WP_001254683.1;Parent=gene-C9E93_RS19460;Dbxref=GenBank:WP_001254683.1;Name=WP_001254683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=C9E93_RS19460;product=YnjH family protein;protein_id=WP_001254683.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 62851 63267 . - . ID=gene-C9E93_RS19465;Name=C9E93_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19465;old_locus_tag=C9E93_19980 NZ_PYJV01000110.1 Protein Homology CDS 62851 63267 . - 0 ID=cds-WP_000592136.1;Parent=gene-C9E93_RS19465;Dbxref=GenBank:WP_000592136.1;Name=WP_000592136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9E93_RS19465;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592136.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 63340 64146 . - . ID=gene-C9E93_RS19470;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9E93_RS19470;old_locus_tag=C9E93_19985 NZ_PYJV01000110.1 Protein Homology CDS 63340 64146 . - 0 ID=cds-WP_000673951.1;Parent=gene-C9E93_RS19470;Dbxref=GenBank:WP_000673951.1;Name=WP_000673951.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9E93_RS19470;product=exodeoxyribonuclease III;protein_id=WP_000673951.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 64592 65818 . + . ID=gene-C9E93_RS19475;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=C9E93_RS19475;old_locus_tag=C9E93_19995 NZ_PYJV01000110.1 Protein Homology CDS 64592 65818 . + 0 ID=cds-WP_135370555.1;Parent=gene-C9E93_RS19475;Dbxref=GenBank:WP_135370555.1;Name=WP_135370555.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9E93_RS19475;product=succinylornithine/acetylornithine transaminase;protein_id=WP_135370555.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 65809 66843 . + . ID=gene-C9E93_RS19480;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9E93_RS19480;old_locus_tag=C9E93_20000 NZ_PYJV01000110.1 Protein Homology CDS 65809 66843 . + 0 ID=cds-WP_058115918.1;Parent=gene-C9E93_RS19480;Dbxref=GenBank:WP_058115918.1;Name=WP_058115918.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9E93_RS19480;product=arginine N-succinyltransferase;protein_id=WP_058115918.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 66840 68318 . + . ID=gene-C9E93_RS19485;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9E93_RS19485;old_locus_tag=C9E93_20005 NZ_PYJV01000110.1 Protein Homology CDS 66840 68318 . + 0 ID=cds-WP_001748365.1;Parent=gene-C9E93_RS19485;Dbxref=GenBank:WP_001748365.1;Name=WP_001748365.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9E93_RS19485;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_001748365.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 68315 69658 . + . ID=gene-C9E93_RS19490;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9E93_RS19490;old_locus_tag=C9E93_20010 NZ_PYJV01000110.1 Protein Homology CDS 68315 69658 . + 0 ID=cds-WP_000123949.1;Parent=gene-C9E93_RS19490;Dbxref=GenBank:WP_000123949.1;Name=WP_000123949.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9E93_RS19490;product=N-succinylarginine dihydrolase;protein_id=WP_000123949.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 69651 70619 . + . ID=gene-C9E93_RS19495;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9E93_RS19495;old_locus_tag=C9E93_20015 NZ_PYJV01000110.1 Protein Homology CDS 69651 70619 . + 0 ID=cds-WP_135370556.1;Parent=gene-C9E93_RS19495;Dbxref=GenBank:WP_135370556.1;Name=WP_135370556.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9E93_RS19495;product=succinylglutamate desuccinylase;protein_id=WP_135370556.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 70954 71439 . + . ID=gene-C9E93_RS19500;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9E93_RS19500;old_locus_tag=C9E93_20025 NZ_PYJV01000110.1 Protein Homology CDS 70954 71439 . + 0 ID=cds-WP_135370557.1;Parent=gene-C9E93_RS19500;Dbxref=GenBank:WP_135370557.1;Name=WP_135370557.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9E93_RS19500;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_135370557.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 71514 72395 . - . ID=gene-C9E93_RS19505;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9E93_RS19505;old_locus_tag=C9E93_20030 NZ_PYJV01000110.1 Protein Homology CDS 71514 72395 . - 0 ID=cds-WP_001518228.1;Parent=gene-C9E93_RS19505;Dbxref=GenBank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9E93_RS19505;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 72516 73343 . - . ID=gene-C9E93_RS19510;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9E93_RS19510;old_locus_tag=C9E93_20035 NZ_PYJV01000110.1 Protein Homology CDS 72516 73343 . - 0 ID=cds-WP_000174981.1;Parent=gene-C9E93_RS19510;Dbxref=GenBank:WP_000174981.1;Name=WP_000174981.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9E93_RS19510;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174981.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 73562 73903 . + . ID=gene-C9E93_RS19515;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9E93_RS19515;old_locus_tag=C9E93_20040 NZ_PYJV01000110.1 Protein Homology CDS 73562 73903 . + 0 ID=cds-WP_001039301.1;Parent=gene-C9E93_RS19515;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9E93_RS19515;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 74204 74524 . + . ID=gene-C9E93_RS19525;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9E93_RS19525;old_locus_tag=C9E93_20050 NZ_PYJV01000110.1 Protein Homology CDS 74204 74524 . + 0 ID=cds-WP_000412161.1;Parent=gene-C9E93_RS19525;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9E93_RS19525;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 74607 75965 . + . ID=gene-C9E93_RS19530;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9E93_RS19530;old_locus_tag=C9E93_20055 NZ_PYJV01000110.1 Protein Homology CDS 74607 75965 . + 0 ID=cds-WP_000073067.1;Parent=gene-C9E93_RS19530;Dbxref=GenBank:WP_000073067.1;Name=WP_000073067.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9E93_RS19530;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073067.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 76016 76363 . + . ID=gene-C9E93_RS19535;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9E93_RS19535;old_locus_tag=C9E93_20060 NZ_PYJV01000110.1 Protein Homology CDS 76016 76363 . + 0 ID=cds-WP_135370558.1;Parent=gene-C9E93_RS19535;Dbxref=GenBank:WP_135370558.1;Name=WP_135370558.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9E93_RS19535;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_135370558.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 76374 77216 . + . ID=gene-C9E93_RS19540;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9E93_RS19540;old_locus_tag=C9E93_20065 NZ_PYJV01000110.1 Protein Homology CDS 76374 77216 . + 0 ID=cds-WP_000983393.1;Parent=gene-C9E93_RS19540;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9E93_RS19540;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 77341 78696 . + . ID=gene-C9E93_RS19545;Name=C9E93_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19545;old_locus_tag=C9E93_20070 NZ_PYJV01000110.1 Protein Homology CDS 77341 78696 . + 0 ID=cds-WP_000078777.1;Parent=gene-C9E93_RS19545;Dbxref=GenBank:WP_000078777.1;Name=WP_000078777.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9E93_RS19545;product=6-phospho-beta-glucosidase;protein_id=WP_000078777.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 78709 79467 . + . ID=gene-C9E93_RS19550;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9E93_RS19550;old_locus_tag=C9E93_20075 NZ_PYJV01000110.1 Protein Homology CDS 78709 79467 . + 0 ID=cds-WP_000442730.1;Parent=gene-C9E93_RS19550;Dbxref=GenBank:WP_000442730.1;Name=WP_000442730.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9E93_RS19550;product=chitin disaccharide deacetylase;protein_id=WP_000442730.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 79511 81763 . - . ID=gene-C9E93_RS19555;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9E93_RS19555;old_locus_tag=C9E93_20080 NZ_PYJV01000110.1 Protein Homology CDS 79511 81763 . - 0 ID=cds-WP_135370559.1;Parent=gene-C9E93_RS19555;Dbxref=GenBank:WP_135370559.1;Name=WP_135370559.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9E93_RS19555;product=catalase HPII;protein_id=WP_135370559.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 82128 82370 . + . ID=gene-C9E93_RS19560;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9E93_RS19560;old_locus_tag=C9E93_20085 NZ_PYJV01000110.1 Protein Homology CDS 82128 82370 . + 0 ID=cds-WP_000977510.1;Parent=gene-C9E93_RS19560;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9E93_RS19560;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 82473 83864 . - . ID=gene-C9E93_RS19565;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9E93_RS19565;old_locus_tag=C9E93_20090 NZ_PYJV01000110.1 Protein Homology CDS 82473 83864 . - 0 ID=cds-WP_001010662.1;Parent=gene-C9E93_RS19565;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9E93_RS19565;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 84001 84600 . - . ID=gene-C9E93_RS19570;Name=C9E93_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19570;old_locus_tag=C9E93_20095 NZ_PYJV01000110.1 Protein Homology CDS 84001 84600 . - 0 ID=cds-WP_000505804.1;Parent=gene-C9E93_RS19570;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9E93_RS19570;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 84738 85406 . - . ID=gene-C9E93_RS19575;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9E93_RS19575;old_locus_tag=C9E93_20100 NZ_PYJV01000110.1 Protein Homology CDS 84738 85406 . - 0 ID=cds-WP_000106854.1;Parent=gene-C9E93_RS19575;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9E93_RS19575;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 85555 86091 . + . ID=gene-C9E93_RS19580;Name=C9E93_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19580;old_locus_tag=C9E93_20105 NZ_PYJV01000110.1 Protein Homology CDS 85555 86091 . + 0 ID=cds-WP_000222158.1;Parent=gene-C9E93_RS19580;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9E93_RS19580;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 86134 86994 . - . ID=gene-C9E93_RS19585;Name=C9E93_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19585;old_locus_tag=C9E93_20110 NZ_PYJV01000110.1 Protein Homology CDS 86134 86994 . - 0 ID=cds-WP_000267686.1;Parent=gene-C9E93_RS19585;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9E93_RS19585;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 87101 87391 . - . ID=gene-C9E93_RS19590;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9E93_RS19590;old_locus_tag=C9E93_20115 NZ_PYJV01000110.1 Protein Homology CDS 87101 87391 . - 0 ID=cds-WP_000146129.1;Parent=gene-C9E93_RS19590;Dbxref=GenBank:WP_000146129.1;Name=WP_000146129.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9E93_RS19590;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146129.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 87488 88420 . - . ID=gene-C9E93_RS19595;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9E93_RS19595;old_locus_tag=C9E93_20120 NZ_PYJV01000110.1 Protein Homology CDS 87488 88420 . - 0 ID=cds-WP_000251707.1;Parent=gene-C9E93_RS19595;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9E93_RS19595;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 88709 89467 . + . ID=gene-C9E93_RS19600;Name=C9E93_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19600;old_locus_tag=C9E93_20125 NZ_PYJV01000110.1 Protein Homology CDS 88709 89467 . + 0 ID=cds-WP_000770981.1;Parent=gene-C9E93_RS19600;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9E93_RS19600;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 89516 90475 . - . ID=gene-C9E93_RS19605;Name=C9E93_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19605;old_locus_tag=C9E93_20130 NZ_PYJV01000110.1 Protein Homology CDS 89516 90475 . - 0 ID=cds-WP_135370560.1;Parent=gene-C9E93_RS19605;Dbxref=GenBank:WP_135370560.1;Name=WP_135370560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9E93_RS19605;product=lipid A deacylase LpxR family protein;protein_id=WP_135370560.1;transl_table=11 NZ_PYJV01000110.1 RefSeq pseudogene 90618 90932 . + . ID=gene-C9E93_RS19610;Name=C9E93_RS19610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS19610;old_locus_tag=C9E93_20135;pseudo=true NZ_PYJV01000110.1 Protein Homology CDS 90618 90932 . + 0 ID=cds-C9E93_RS19610;Parent=gene-C9E93_RS19610;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9E93_RS19610;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 90929 91783 . + . ID=gene-C9E93_RS19615;Name=C9E93_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19615;old_locus_tag=C9E93_20140 NZ_PYJV01000110.1 Protein Homology CDS 90929 91783 . + 0 ID=cds-WP_001044089.1;Parent=gene-C9E93_RS19615;Dbxref=GenBank:WP_001044089.1;Name=WP_001044089.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9E93_RS19615;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044089.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 92043 93971 . + . ID=gene-C9E93_RS19620;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9E93_RS19620;old_locus_tag=C9E93_20145 NZ_PYJV01000110.1 Protein Homology CDS 92043 93971 . + 0 ID=cds-WP_023255121.1;Parent=gene-C9E93_RS19620;Dbxref=GenBank:WP_023255121.1;Name=WP_023255121.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9E93_RS19620;product=threonine--tRNA ligase;protein_id=WP_023255121.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 93975 94517 . + . ID=gene-C9E93_RS19625;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9E93_RS19625;old_locus_tag=C9E93_20150 NZ_PYJV01000110.1 Protein Homology CDS 93975 94517 . + 0 ID=cds-WP_001574431.1;Parent=gene-C9E93_RS19625;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9E93_RS19625;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 94613 94810 . + . ID=gene-C9E93_RS19630;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9E93_RS19630;old_locus_tag=C9E93_20155 NZ_PYJV01000110.1 Protein Homology CDS 94613 94810 . + 0 ID=cds-WP_001124225.1;Parent=gene-C9E93_RS19630;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9E93_RS19630;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 94861 95217 . + . ID=gene-C9E93_RS19635;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9E93_RS19635;old_locus_tag=C9E93_20160 NZ_PYJV01000110.1 Protein Homology CDS 94861 95217 . + 0 ID=cds-WP_000124850.1;Parent=gene-C9E93_RS19635;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9E93_RS19635;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_PYJV01000110.1 cmsearch sequence_feature 95333 95456 . + . ID=id-NZ_PYJV01000110.1:95333..95456;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000110.1 RefSeq gene 95338 95382 . + . ID=gene-C9E93_RS19640;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9E93_RS19640;old_locus_tag=C9E93_20165 NZ_PYJV01000110.1 Protein Homology CDS 95338 95382 . + 0 ID=cds-WP_001386830.1;Parent=gene-C9E93_RS19640;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9E93_RS19640;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 95519 96502 . + . ID=gene-C9E93_RS19645;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9E93_RS19645;old_locus_tag=C9E93_20170 NZ_PYJV01000110.1 Protein Homology CDS 95519 96502 . + 0 ID=cds-WP_000018570.1;Parent=gene-C9E93_RS19645;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=C9E93_RS19645;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 96518 98905 . + . ID=gene-C9E93_RS19650;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9E93_RS19650;old_locus_tag=C9E93_20175 NZ_PYJV01000110.1 Protein Homology CDS 96518 98905 . + 0 ID=cds-WP_135370562.1;Parent=gene-C9E93_RS19650;Dbxref=GenBank:WP_135370562.1;Name=WP_135370562.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9E93_RS19650;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_135370562.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 98910 99209 . + . ID=gene-C9E93_RS19655;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9E93_RS19655;old_locus_tag=C9E93_20180 NZ_PYJV01000110.1 Protein Homology CDS 98910 99209 . + 0 ID=cds-WP_001229266.1;Parent=gene-C9E93_RS19655;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9E93_RS19655;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 99412 100392 . + . ID=gene-C9E93_RS19660;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9E93_RS19660;old_locus_tag=C9E93_20185 NZ_PYJV01000110.1 Protein Homology CDS 99412 100392 . + 0 ID=cds-WP_080197375.1;Parent=gene-C9E93_RS19660;Dbxref=GenBank:WP_080197375.1;Name=WP_080197375.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9E93_RS19660;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_080197375.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 100484 101035 . + . ID=gene-C9E93_RS19665;Name=C9E93_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19665;old_locus_tag=C9E93_20190 NZ_PYJV01000110.1 Protein Homology CDS 100484 101035 . + 0 ID=cds-WP_001181565.1;Parent=gene-C9E93_RS19665;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9E93_RS19665;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 101035 101784 . + . ID=gene-C9E93_RS19670;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9E93_RS19670;old_locus_tag=C9E93_20195 NZ_PYJV01000110.1 Protein Homology CDS 101035 101784 . + 0 ID=cds-WP_135370563.1;Parent=gene-C9E93_RS19670;Dbxref=GenBank:WP_135370563.1;Name=WP_135370563.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9E93_RS19670;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_135370563.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 101861 102325 . + . ID=gene-C9E93_RS19675;Name=C9E93_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19675;old_locus_tag=C9E93_20200 NZ_PYJV01000110.1 Protein Homology CDS 101861 102325 . + 0 ID=cds-WP_001213256.1;Parent=gene-C9E93_RS19675;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9E93_RS19675;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 102639 103349 . + . ID=gene-C9E93_RS19680;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9E93_RS19680;old_locus_tag=C9E93_20205 NZ_PYJV01000110.1 Protein Homology CDS 102639 103349 . + 0 ID=cds-WP_135370655.1;Parent=gene-C9E93_RS19680;Dbxref=GenBank:WP_135370655.1;Name=WP_135370655.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9E93_RS19680;product=anti-FlhDC factor YdiV;protein_id=WP_135370655.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 103411 104853 . + . ID=gene-C9E93_RS19685;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9E93_RS19685;old_locus_tag=C9E93_20210 NZ_PYJV01000110.1 Protein Homology CDS 103411 104853 . + 0 ID=cds-WP_023194181.1;Parent=gene-C9E93_RS19685;Dbxref=GenBank:WP_023194181.1;Name=WP_023194181.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9E93_RS19685;product=protein adenylyltransferase SelO;protein_id=WP_023194181.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 104888 105079 . - . ID=gene-C9E93_RS19690;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9E93_RS19690;old_locus_tag=C9E93_20215 NZ_PYJV01000110.1 Protein Homology CDS 104888 105079 . - 0 ID=cds-WP_000089118.1;Parent=gene-C9E93_RS19690;Dbxref=GenBank:WP_000089118.1;Name=WP_000089118.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9E93_RS19690;product=hemin uptake protein HemP;protein_id=WP_000089118.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 105236 106282 . - . ID=gene-C9E93_RS19695;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9E93_RS19695;old_locus_tag=C9E93_20220 NZ_PYJV01000110.1 Protein Homology CDS 105236 106282 . - 0 ID=cds-WP_001082196.1;Parent=gene-C9E93_RS19695;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9E93_RS19695;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 106438 107271 . - . ID=gene-C9E93_RS19700;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9E93_RS19700;old_locus_tag=C9E93_20225 NZ_PYJV01000110.1 Protein Homology CDS 106438 107271 . - 0 ID=cds-WP_000370992.1;Parent=gene-C9E93_RS19700;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9E93_RS19700;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 107608 109986 . + . ID=gene-C9E93_RS19705;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=C9E93_RS19705;old_locus_tag=C9E93_20230 NZ_PYJV01000110.1 Protein Homology CDS 107608 109986 . + 0 ID=cds-WP_135370654.1;Parent=gene-C9E93_RS19705;Dbxref=GenBank:WP_135370654.1;Name=WP_135370654.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9E93_RS19705;product=phosphoenolpyruvate synthase;protein_id=WP_135370654.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 110028 111668 . - . ID=gene-C9E93_RS19710;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9E93_RS19710;old_locus_tag=C9E93_20235 NZ_PYJV01000110.1 Protein Homology CDS 110028 111668 . - 0 ID=cds-WP_135370653.1;Parent=gene-C9E93_RS19710;Dbxref=GenBank:WP_135370653.1;Name=WP_135370653.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9E93_RS19710;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_135370653.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 111906 112199 . - . ID=gene-C9E93_RS19715;Name=C9E93_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19715;old_locus_tag=C9E93_20240 NZ_PYJV01000110.1 Protein Homology CDS 111906 112199 . - 0 ID=cds-WP_000093362.1;Parent=gene-C9E93_RS19715;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9E93_RS19715;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 112196 113482 . - . ID=gene-C9E93_RS19720;Name=C9E93_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19720;old_locus_tag=C9E93_20245 NZ_PYJV01000110.1 Protein Homology CDS 112196 113482 . - 0 ID=cds-WP_001278555.1;Parent=gene-C9E93_RS19720;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9E93_RS19720;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 113539 114474 . - . ID=gene-C9E93_RS19725;Name=C9E93_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19725;old_locus_tag=C9E93_20250 NZ_PYJV01000110.1 Protein Homology CDS 113539 114474 . - 0 ID=cds-WP_045900126.1;Parent=gene-C9E93_RS19725;Dbxref=GenBank:WP_045900126.1;Name=WP_045900126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9E93_RS19725;product=electron transfer flavoprotein subunit alpha;protein_id=WP_045900126.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 114496 115260 . - . ID=gene-C9E93_RS19730;Name=C9E93_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19730;old_locus_tag=C9E93_20255 NZ_PYJV01000110.1 Protein Homology CDS 114496 115260 . - 0 ID=cds-WP_000692096.1;Parent=gene-C9E93_RS19730;Dbxref=GenBank:WP_000692096.1;Name=WP_000692096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9E93_RS19730;product=electron transfer flavoprotein;protein_id=WP_000692096.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 115723 116613 . + . ID=gene-C9E93_RS19735;Name=C9E93_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19735;old_locus_tag=C9E93_20260 NZ_PYJV01000110.1 Protein Homology CDS 115723 116613 . + 0 ID=cds-WP_000284832.1;Parent=gene-C9E93_RS19735;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9E93_RS19735;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 116689 117840 . - . ID=gene-C9E93_RS19740;Name=C9E93_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19740;old_locus_tag=C9E93_20265 NZ_PYJV01000110.1 Protein Homology CDS 116689 117840 . - 0 ID=cds-WP_000347819.1;Parent=gene-C9E93_RS19740;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9E93_RS19740;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 117854 119449 . - . ID=gene-C9E93_RS19745;Name=C9E93_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19745;old_locus_tag=C9E93_20270 NZ_PYJV01000110.1 Protein Homology CDS 117854 119449 . - 0 ID=cds-WP_024798032.1;Parent=gene-C9E93_RS19745;Dbxref=GenBank:WP_024798032.1;Name=WP_024798032.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9E93_RS19745;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_024798032.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 119603 120361 . - . ID=gene-C9E93_RS19750;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9E93_RS19750;old_locus_tag=C9E93_20275 NZ_PYJV01000110.1 Protein Homology CDS 119603 120361 . - 0 ID=cds-WP_000860221.1;Parent=gene-C9E93_RS19750;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9E93_RS19750;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 120406 121272 . - . ID=gene-C9E93_RS19755;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9E93_RS19755;old_locus_tag=C9E93_20280 NZ_PYJV01000110.1 Protein Homology CDS 120406 121272 . - 0 ID=cds-WP_000383488.1;Parent=gene-C9E93_RS19755;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9E93_RS19755;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 121339 122574 . - . ID=gene-C9E93_RS19760;Name=C9E93_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19760;old_locus_tag=C9E93_20285 NZ_PYJV01000110.1 Protein Homology CDS 121339 122574 . - 0 ID=cds-WP_000081209.1;Parent=gene-C9E93_RS19760;Dbxref=GenBank:WP_000081209.1;Name=WP_000081209.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9E93_RS19760;product=MFS transporter;protein_id=WP_000081209.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 123087 124298 . - . ID=gene-C9E93_RS19765;Name=C9E93_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19765;old_locus_tag=C9E93_20295 NZ_PYJV01000110.1 Protein Homology CDS 123087 124298 . - 0 ID=cds-WP_000797667.1;Parent=gene-C9E93_RS19765;Dbxref=GenBank:WP_000797667.1;Name=WP_000797667.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9E93_RS19765;product=MFS transporter;protein_id=WP_000797667.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 124439 124798 . - . ID=gene-C9E93_RS19770;Name=C9E93_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19770;old_locus_tag=C9E93_20300 NZ_PYJV01000110.1 Protein Homology CDS 124439 124798 . - 0 ID=cds-WP_000980452.1;Parent=gene-C9E93_RS19770;Dbxref=GenBank:WP_000980452.1;Name=WP_000980452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9E93_RS19770;product=YdiL family protein;protein_id=WP_000980452.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 124966 125073 . - . ID=gene-C9E93_RS19775;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9E93_RS19775;old_locus_tag=C9E93_20305 NZ_PYJV01000110.1 cmsearch antisense_RNA 124966 125073 . - . ID=rna-C9E93_RS19775;Parent=gene-C9E93_RS19775;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19775;product=antisense sRNA RprA NZ_PYJV01000110.1 cmsearch exon 124966 125073 . - . ID=exon-C9E93_RS19775-1;Parent=rna-C9E93_RS19775;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19775;product=antisense sRNA RprA NZ_PYJV01000110.1 RefSeq gene 125256 126374 . - . ID=gene-C9E93_RS19780;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9E93_RS19780;old_locus_tag=C9E93_20310 NZ_PYJV01000110.1 Protein Homology CDS 125256 126374 . - 0 ID=cds-WP_058109762.1;Parent=gene-C9E93_RS19780;Dbxref=GenBank:WP_058109762.1;Name=WP_058109762.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9E93_RS19780;product=AI-2E family transporter YdiK;protein_id=WP_058109762.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 126639 129695 . + . ID=gene-C9E93_RS19785;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=C9E93_RS19785;old_locus_tag=C9E93_20315 NZ_PYJV01000110.1 Protein Homology CDS 126639 129695 . + 0 ID=cds-WP_135370652.1;Parent=gene-C9E93_RS19785;Dbxref=GenBank:WP_135370652.1;Name=WP_135370652.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9E93_RS19785;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_135370652.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 129692 130102 . + . ID=gene-C9E93_RS19790;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9E93_RS19790;old_locus_tag=C9E93_20320 NZ_PYJV01000110.1 Protein Homology CDS 129692 130102 . + 0 ID=cds-WP_000637926.1;Parent=gene-C9E93_RS19790;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9E93_RS19790;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 130201 130389 . + . ID=gene-C9E93_RS19795;Name=C9E93_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19795;old_locus_tag=C9E93_20325 NZ_PYJV01000110.1 Protein Homology CDS 130201 130389 . + 0 ID=cds-WP_001537749.1;Parent=gene-C9E93_RS19795;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9E93_RS19795;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 130677 132023 . - . ID=gene-C9E93_RS19800;Name=C9E93_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19800;old_locus_tag=C9E93_20330 NZ_PYJV01000110.1 Protein Homology CDS 130677 132023 . - 0 ID=cds-WP_135370651.1;Parent=gene-C9E93_RS19800;Dbxref=GenBank:WP_135370651.1;Name=WP_135370651.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9E93_RS19800;product=L-cystine transporter;protein_id=WP_135370651.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 132450 132818 . + . ID=gene-C9E93_RS19805;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9E93_RS19805;old_locus_tag=C9E93_20335 NZ_PYJV01000110.1 Protein Homology CDS 132450 132818 . + 0 ID=cds-WP_000418973.1;Parent=gene-C9E93_RS19805;Dbxref=GenBank:WP_000418973.1;Name=WP_000418973.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9E93_RS19805;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418973.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 132827 134314 . + . ID=gene-C9E93_RS19810;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9E93_RS19810;old_locus_tag=C9E93_20340 NZ_PYJV01000110.1 Protein Homology CDS 132827 134314 . + 0 ID=cds-WP_135370650.1;Parent=gene-C9E93_RS19810;Dbxref=GenBank:WP_135370650.1;Name=WP_135370650.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9E93_RS19810;product=Fe-S cluster assembly protein SufB;protein_id=WP_135370650.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 134331 135077 . + . ID=gene-C9E93_RS19815;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9E93_RS19815;old_locus_tag=C9E93_20345 NZ_PYJV01000110.1 Protein Homology CDS 134331 135077 . + 0 ID=cds-WP_000948902.1;Parent=gene-C9E93_RS19815;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9E93_RS19815;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 135052 136323 . + . ID=gene-C9E93_RS19820;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9E93_RS19820;old_locus_tag=C9E93_20350 NZ_PYJV01000110.1 Protein Homology CDS 135052 136323 . + 0 ID=cds-WP_135370649.1;Parent=gene-C9E93_RS19820;Dbxref=GenBank:WP_135370649.1;Name=WP_135370649.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9E93_RS19820;product=Fe-S cluster assembly protein SufD;protein_id=WP_135370649.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 136320 137540 . + . ID=gene-C9E93_RS19825;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9E93_RS19825;old_locus_tag=C9E93_20355 NZ_PYJV01000110.1 Protein Homology CDS 136320 137540 . + 0 ID=cds-WP_000143859.1;Parent=gene-C9E93_RS19825;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9E93_RS19825;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 137553 137969 . + . ID=gene-C9E93_RS19830;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9E93_RS19830;old_locus_tag=C9E93_20360 NZ_PYJV01000110.1 Protein Homology CDS 137553 137969 . + 0 ID=cds-WP_135370648.1;Parent=gene-C9E93_RS19830;Dbxref=GenBank:WP_135370648.1;Name=WP_135370648.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9E93_RS19830;product=cysteine desulfuration protein SufE;protein_id=WP_135370648.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 138124 139125 . + . ID=gene-C9E93_RS19835;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=C9E93_RS19835;old_locus_tag=C9E93_20365 NZ_PYJV01000110.1 Protein Homology CDS 138124 139125 . + 0 ID=cds-WP_135370647.1;Parent=gene-C9E93_RS19835;Dbxref=GenBank:WP_135370647.1;Name=WP_135370647.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9E93_RS19835;product=L%2CD-transpeptidase LdtE;protein_id=WP_135370647.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 139192 139431 . - . ID=gene-C9E93_RS19840;Name=C9E93_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19840;old_locus_tag=C9E93_20370 NZ_PYJV01000110.1 Protein Homology CDS 139192 139431 . - 0 ID=cds-WP_080198195.1;Parent=gene-C9E93_RS19840;Dbxref=GenBank:WP_080198195.1;Name=WP_080198195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9E93_RS19840;product=major outer membrane lipoprotein;protein_id=WP_080198195.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 139514 139750 . - . ID=gene-C9E93_RS19845;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9E93_RS19845;old_locus_tag=C9E93_20375 NZ_PYJV01000110.1 Protein Homology CDS 139514 139750 . - 0 ID=cds-WP_001082307.1;Parent=gene-C9E93_RS19845;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9E93_RS19845;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 140061 141473 . - . ID=gene-C9E93_RS19850;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=C9E93_RS19850;old_locus_tag=C9E93_20380 NZ_PYJV01000110.1 Protein Homology CDS 140061 141473 . - 0 ID=cds-WP_000751447.1;Parent=gene-C9E93_RS19850;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9E93_RS19850;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 141481 141711 . - . ID=gene-C9E93_RS24230;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=C9E93_RS24230 NZ_PYJV01000110.1 Protein Homology CDS 141481 141711 . - 0 ID=cds-WP_418143684.1;Parent=gene-C9E93_RS24230;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=C9E93_RS24230;product=protein YnhH;protein_id=WP_418143684.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 141875 143218 . - . ID=gene-C9E93_RS19855;Name=C9E93_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19855;old_locus_tag=C9E93_20390 NZ_PYJV01000110.1 Protein Homology CDS 141875 143218 . - 0 ID=cds-WP_000756089.1;Parent=gene-C9E93_RS19855;Dbxref=GenBank:WP_000756089.1;Name=WP_000756089.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9E93_RS19855;product=APC family permease;protein_id=WP_000756089.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 143240 144133 . - . ID=gene-C9E93_RS19860;Name=C9E93_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19860;old_locus_tag=C9E93_20395 NZ_PYJV01000110.1 Protein Homology CDS 143240 144133 . - 0 ID=cds-WP_023203446.1;Parent=gene-C9E93_RS19860;Dbxref=GenBank:WP_023203446.1;Name=WP_023203446.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9E93_RS19860;product=proline iminopeptidase-family hydrolase;protein_id=WP_023203446.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 144192 144929 . - . ID=gene-C9E93_RS19865;Name=C9E93_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19865;old_locus_tag=C9E93_20400 NZ_PYJV01000110.1 Protein Homology CDS 144192 144929 . - 0 ID=cds-WP_000697195.1;Parent=gene-C9E93_RS19865;Dbxref=GenBank:WP_000697195.1;Name=WP_000697195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9E93_RS19865;product=glutamine amidotransferase;protein_id=WP_000697195.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 144941 146167 . - . ID=gene-C9E93_RS19870;Name=C9E93_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19870;old_locus_tag=C9E93_20405 NZ_PYJV01000110.1 Protein Homology CDS 144941 146167 . - 0 ID=cds-WP_000471822.1;Parent=gene-C9E93_RS19870;Dbxref=GenBank:WP_000471822.1;Name=WP_000471822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9E93_RS19870;product=PfkB family carbohydrate kinase;protein_id=WP_000471822.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 146490 149552 . - . ID=gene-C9E93_RS19875;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=C9E93_RS19875;old_locus_tag=C9E93_20410 NZ_PYJV01000110.1 Protein Homology CDS 146490 149552 . - 0 ID=cds-WP_135370646.1;Parent=gene-C9E93_RS19875;Dbxref=GenBank:WP_135370646.1;Name=WP_135370646.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9E93_RS19875;product=tetrathionate reductase subunit TtrA;protein_id=WP_135370646.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 149545 150567 . - . ID=gene-C9E93_RS19880;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9E93_RS19880;old_locus_tag=C9E93_20415 NZ_PYJV01000110.1 Protein Homology CDS 149545 150567 . - 0 ID=cds-WP_000149760.1;Parent=gene-C9E93_RS19880;Dbxref=GenBank:WP_000149760.1;Name=WP_000149760.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9E93_RS19880;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149760.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 150568 151302 . - . ID=gene-C9E93_RS19885;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9E93_RS19885;old_locus_tag=C9E93_20420 NZ_PYJV01000110.1 Protein Homology CDS 150568 151302 . - 0 ID=cds-WP_001523928.1;Parent=gene-C9E93_RS19885;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=C9E93_RS19885;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 151484 153262 . + . ID=gene-C9E93_RS19890;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9E93_RS19890;old_locus_tag=C9E93_20425 NZ_PYJV01000110.1 Protein Homology CDS 151484 153262 . + 0 ID=cds-WP_080094943.1;Parent=gene-C9E93_RS19890;Dbxref=GenBank:WP_080094943.1;Name=WP_080094943.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9E93_RS19890;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_080094943.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 153237 153857 . + . ID=gene-C9E93_RS19895;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9E93_RS19895;old_locus_tag=C9E93_20430 NZ_PYJV01000110.1 Protein Homology CDS 153237 153857 . + 0 ID=cds-WP_000190927.1;Parent=gene-C9E93_RS19895;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9E93_RS19895;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 153955 154167 . + . ID=gene-C9E93_RS19900;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9E93_RS19900;old_locus_tag=C9E93_20435 NZ_PYJV01000110.1 Protein Homology CDS 153955 154167 . + 0 ID=cds-WP_000165779.1;Parent=gene-C9E93_RS19900;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9E93_RS19900;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 154263 155222 . - . ID=gene-C9E93_RS19905;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9E93_RS19905;old_locus_tag=C9E93_20440 NZ_PYJV01000110.1 Protein Homology CDS 154263 155222 . - 0 ID=cds-WP_001060723.1;Parent=gene-C9E93_RS19905;Dbxref=GenBank:WP_001060723.1;Name=WP_001060723.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9E93_RS19905;product=transcriptional regulator MlrB;protein_id=WP_001060723.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 155394 156122 . - . ID=gene-C9E93_RS19910;Name=C9E93_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19910;old_locus_tag=C9E93_20445 NZ_PYJV01000110.1 Protein Homology CDS 155394 156122 . - 0 ID=cds-WP_000122320.1;Parent=gene-C9E93_RS19910;Dbxref=GenBank:WP_000122320.1;Name=WP_000122320.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9E93_RS19910;product=MerR family transcriptional regulator;protein_id=WP_000122320.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 156301 156939 . - . ID=gene-C9E93_RS19915;Name=C9E93_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19915;old_locus_tag=C9E93_20450 NZ_PYJV01000110.1 Protein Homology CDS 156301 156939 . - 0 ID=cds-WP_000666334.1;Parent=gene-C9E93_RS19915;Dbxref=GenBank:WP_000666334.1;Name=WP_000666334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9E93_RS19915;product=two component system response regulator;protein_id=WP_000666334.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 156970 159732 . - . ID=gene-C9E93_RS19920;Name=C9E93_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19920;old_locus_tag=C9E93_20455 NZ_PYJV01000110.1 Protein Homology CDS 156970 159732 . - 0 ID=cds-WP_135370645.1;Parent=gene-C9E93_RS19920;Dbxref=GenBank:WP_135370645.1;Name=WP_135370645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9E93_RS19920;product=two component system sensor kinase;protein_id=WP_135370645.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 160133 160534 . + . ID=gene-C9E93_RS19925;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9E93_RS19925;old_locus_tag=C9E93_20460 NZ_PYJV01000110.1 Protein Homology CDS 160133 160534 . + 0 ID=cds-WP_001588845.1;Parent=gene-C9E93_RS19925;Dbxref=GenBank:WP_001588845.1;Name=WP_001588845.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9E93_RS19925;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001588845.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 160536 162029 . + . ID=gene-C9E93_RS19930;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9E93_RS19930;old_locus_tag=C9E93_20465 NZ_PYJV01000110.1 Protein Homology CDS 160536 162029 . + 0 ID=cds-WP_000261287.1;Parent=gene-C9E93_RS19930;Dbxref=GenBank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9E93_RS19930;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 162010 163221 . + . ID=gene-C9E93_RS19935;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9E93_RS19935;old_locus_tag=C9E93_20470 NZ_PYJV01000110.1 Protein Homology CDS 162010 163221 . + 0 ID=cds-WP_080110796.1;Parent=gene-C9E93_RS19935;Dbxref=GenBank:WP_080110796.1;Name=WP_080110796.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9E93_RS19935;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_080110796.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 163229 163471 . + . ID=gene-C9E93_RS19940;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9E93_RS19940;old_locus_tag=C9E93_20475 NZ_PYJV01000110.1 Protein Homology CDS 163229 163471 . + 0 ID=cds-WP_000210204.1;Parent=gene-C9E93_RS19940;Dbxref=GenBank:WP_000210204.1;Name=WP_000210204.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9E93_RS19940;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210204.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 163735 164061 . + . ID=gene-C9E93_RS19945;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E93_RS19945;old_locus_tag=C9E93_20480 NZ_PYJV01000110.1 Protein Homology CDS 163735 164061 . + 0 ID=cds-WP_000972855.1;Parent=gene-C9E93_RS19945;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9E93_RS19945;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 164068 164658 . + . ID=gene-C9E93_RS19950;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E93_RS19950;old_locus_tag=C9E93_20485 NZ_PYJV01000110.1 Protein Homology CDS 164068 164658 . + 0 ID=cds-WP_000094419.1;Parent=gene-C9E93_RS19950;Dbxref=GenBank:WP_000094419.1;Name=WP_000094419.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9E93_RS19950;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094419.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 164655 165128 . + . ID=gene-C9E93_RS19955;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9E93_RS19955;old_locus_tag=C9E93_20490 NZ_PYJV01000110.1 Protein Homology CDS 164655 165128 . + 0 ID=cds-WP_000711023.1;Parent=gene-C9E93_RS19955;Dbxref=GenBank:WP_000711023.1;Name=WP_000711023.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9E93_RS19955;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711023.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 165131 166585 . + . ID=gene-C9E93_RS19960;Name=C9E93_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19960;old_locus_tag=C9E93_20495 NZ_PYJV01000110.1 Protein Homology CDS 165131 166585 . + 0 ID=cds-WP_135370526.1;Parent=gene-C9E93_RS19960;Dbxref=GenBank:WP_135370526.1;Name=WP_135370526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9E93_RS19960;product=type III secretion system translocon protein;protein_id=WP_135370526.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 166601 167188 . + . ID=gene-C9E93_RS19965;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9E93_RS19965;old_locus_tag=C9E93_20500 NZ_PYJV01000110.1 Protein Homology CDS 166601 167188 . + 0 ID=cds-WP_135370527.1;Parent=gene-C9E93_RS19965;Dbxref=GenBank:WP_135370527.1;Name=WP_135370527.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9E93_RS19965;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_135370527.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 167191 167607 . + . ID=gene-C9E93_RS19970;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9E93_RS19970;old_locus_tag=C9E93_20505 NZ_PYJV01000110.1 Protein Homology CDS 167191 167607 . + 0 ID=cds-WP_023209473.1;Parent=gene-C9E93_RS19970;Dbxref=GenBank:WP_023209473.1;Name=WP_023209473.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9E93_RS19970;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_023209473.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 167659 168093 . + . ID=gene-C9E93_RS19975;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=C9E93_RS19975;old_locus_tag=C9E93_20510 NZ_PYJV01000110.1 Protein Homology CDS 167659 168093 . + 0 ID=cds-WP_000979963.1;Parent=gene-C9E93_RS19975;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9E93_RS19975;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 168109 168891 . + . ID=gene-C9E93_RS19980;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9E93_RS19980;old_locus_tag=C9E93_20515 NZ_PYJV01000110.1 Protein Homology CDS 168109 168891 . + 0 ID=cds-WP_080203471.1;Parent=gene-C9E93_RS19980;Dbxref=GenBank:WP_080203471.1;Name=WP_080203471.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9E93_RS19980;product=type III secretion systems effector SseF;protein_id=WP_080203471.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 168888 169577 . + . ID=gene-C9E93_RS19985;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9E93_RS19985;old_locus_tag=C9E93_20520 NZ_PYJV01000110.1 Protein Homology CDS 168888 169577 . + 0 ID=cds-WP_000805835.1;Parent=gene-C9E93_RS19985;Dbxref=GenBank:WP_000805835.1;Name=WP_000805835.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9E93_RS19985;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805835.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 169671 169886 . + . ID=gene-C9E93_RS19990;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9E93_RS19990;old_locus_tag=C9E93_20525 NZ_PYJV01000110.1 Protein Homology CDS 169671 169886 . + 0 ID=cds-WP_000350226.1;Parent=gene-C9E93_RS19990;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9E93_RS19990;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 169864 170154 . + . ID=gene-C9E93_RS19995;Name=C9E93_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19995;old_locus_tag=C9E93_20530 NZ_PYJV01000110.1 Protein Homology CDS 169864 170154 . + 0 ID=cds-WP_000444713.1;Parent=gene-C9E93_RS19995;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9E93_RS19995;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 170166 170414 . + . ID=gene-C9E93_RS20000;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9E93_RS20000;old_locus_tag=C9E93_20535 NZ_PYJV01000110.1 Protein Homology CDS 170166 170414 . + 0 ID=cds-WP_023232141.1;Parent=gene-C9E93_RS20000;Dbxref=GenBank:WP_023232141.1;Name=WP_023232141.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=C9E93_RS20000;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_023232141.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 170411 171160 . + . ID=gene-C9E93_RS20005;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS20005;old_locus_tag=C9E93_20540 NZ_PYJV01000110.1 Protein Homology CDS 170411 171160 . + 0 ID=cds-WP_000862878.1;Parent=gene-C9E93_RS20005;Dbxref=GenBank:WP_000862878.1;Name=WP_000862878.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9E93_RS20005;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862878.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 171178 171726 . + . ID=gene-C9E93_RS20010;Name=C9E93_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20010;old_locus_tag=C9E93_20545 NZ_PYJV01000110.1 Protein Homology CDS 171178 171726 . + 0 ID=cds-WP_023199466.1;Parent=gene-C9E93_RS20010;Dbxref=GenBank:WP_023199466.1;Name=WP_023199466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9E93_RS20010;product=type III secretion system domain-containing protein;protein_id=WP_023199466.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 171723 172397 . + . ID=gene-C9E93_RS20015;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9E93_RS20015;old_locus_tag=C9E93_20550 NZ_PYJV01000110.1 Protein Homology CDS 171723 172397 . + 0 ID=cds-WP_135370528.1;Parent=gene-C9E93_RS20015;Dbxref=GenBank:WP_135370528.1;Name=WP_135370528.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9E93_RS20015;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_135370528.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 172363 173379 . + . ID=gene-C9E93_RS20020;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9E93_RS20020;old_locus_tag=C9E93_20555 NZ_PYJV01000110.1 Protein Homology CDS 172363 173379 . + 0 ID=cds-WP_135370529.1;Parent=gene-C9E93_RS20020;Dbxref=GenBank:WP_135370529.1;Name=WP_135370529.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9E93_RS20020;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_135370529.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 173437 173805 . + . ID=gene-C9E93_RS20025;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9E93_RS20025;old_locus_tag=C9E93_20560 NZ_PYJV01000110.1 Protein Homology CDS 173437 173805 . + 0 ID=cds-WP_000383702.1;Parent=gene-C9E93_RS20025;Dbxref=GenBank:WP_000383702.1;Name=WP_000383702.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9E93_RS20025;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383702.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 173790 175835 . + . ID=gene-C9E93_RS20030;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9E93_RS20030;old_locus_tag=C9E93_20565 NZ_PYJV01000110.1 Protein Homology CDS 173790 175835 . + 0 ID=cds-WP_001258231.1;Parent=gene-C9E93_RS20030;Dbxref=GenBank:WP_001258231.1;Name=WP_001258231.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9E93_RS20030;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258231.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 175825 177126 . + . ID=gene-C9E93_RS20035;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9E93_RS20035;old_locus_tag=C9E93_20570 NZ_PYJV01000110.1 Protein Homology CDS 175825 177126 . + 0 ID=cds-WP_000787216.1;Parent=gene-C9E93_RS20035;Dbxref=GenBank:WP_000787216.1;Name=WP_000787216.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9E93_RS20035;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787216.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 177129 177506 . + . ID=gene-C9E93_RS20040;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9E93_RS20040;old_locus_tag=C9E93_20575 NZ_PYJV01000110.1 Protein Homology CDS 177129 177506 . + 0 ID=cds-WP_000449089.1;Parent=gene-C9E93_RS20040;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9E93_RS20040;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 177487 177861 . + . ID=gene-C9E93_RS20045;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9E93_RS20045;old_locus_tag=C9E93_20580 NZ_PYJV01000110.1 Protein Homology CDS 177487 177861 . + 0 ID=cds-WP_001223305.1;Parent=gene-C9E93_RS20045;Dbxref=GenBank:WP_001223305.1;Name=WP_001223305.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9E93_RS20045;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223305.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 177842 178810 . + . ID=gene-C9E93_RS20050;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9E93_RS20050;old_locus_tag=C9E93_20585 NZ_PYJV01000110.1 Protein Homology CDS 177842 178810 . + 0 ID=cds-WP_047606427.1;Parent=gene-C9E93_RS20050;Dbxref=GenBank:WP_047606427.1;Name=WP_047606427.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9E93_RS20050;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_047606427.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 178878 179525 . + . ID=gene-C9E93_RS20055;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9E93_RS20055;old_locus_tag=C9E93_20590 NZ_PYJV01000110.1 Protein Homology CDS 178878 179525 . + 0 ID=cds-WP_000056367.1;Parent=gene-C9E93_RS20055;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9E93_RS20055;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 179522 179788 . + . ID=gene-C9E93_RS20060;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9E93_RS20060;old_locus_tag=C9E93_20595 NZ_PYJV01000110.1 Protein Homology CDS 179522 179788 . + 0 ID=cds-WP_000999982.1;Parent=gene-C9E93_RS20060;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9E93_RS20060;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 179789 180568 . + . ID=gene-C9E93_RS20065;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9E93_RS20065;old_locus_tag=C9E93_20600 NZ_PYJV01000110.1 Protein Homology CDS 179789 180568 . + 0 ID=cds-WP_135370530.1;Parent=gene-C9E93_RS20065;Dbxref=GenBank:WP_135370530.1;Name=WP_135370530.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9E93_RS20065;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_135370530.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 180565 181623 . + . ID=gene-C9E93_RS20070;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9E93_RS20070;old_locus_tag=C9E93_20605 NZ_PYJV01000110.1 Protein Homology CDS 180565 181623 . + 0 ID=cds-WP_135400638.1;Parent=gene-C9E93_RS20070;Dbxref=GenBank:WP_135400638.1;Name=WP_135400638.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9E93_RS20070;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_135400638.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 181782 181858 . - . ID=gene-C9E93_RS20075;Name=C9E93_RS20075;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS20075;old_locus_tag=C9E93_20610 NZ_PYJV01000110.1 tRNAscan-SE tRNA 181782 181858 . - . ID=rna-C9E93_RS20075;Parent=gene-C9E93_RS20075;anticodon=(pos:complement(181822..181824));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20075;product=tRNA-Val NZ_PYJV01000110.1 tRNAscan-SE exon 181782 181858 . - . ID=exon-C9E93_RS20075-1;Parent=rna-C9E93_RS20075;anticodon=(pos:complement(181822..181824));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20075;product=tRNA-Val NZ_PYJV01000110.1 RefSeq gene 181869 181945 . - . ID=gene-C9E93_RS20080;Name=C9E93_RS20080;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS20080;old_locus_tag=C9E93_20615 NZ_PYJV01000110.1 tRNAscan-SE tRNA 181869 181945 . - . ID=rna-C9E93_RS20080;Parent=gene-C9E93_RS20080;anticodon=(pos:complement(181909..181911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20080;product=tRNA-Val NZ_PYJV01000110.1 tRNAscan-SE exon 181869 181945 . - . ID=exon-C9E93_RS20080-1;Parent=rna-C9E93_RS20080;anticodon=(pos:complement(181909..181911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20080;product=tRNA-Val NZ_PYJV01000110.1 RefSeq gene 182097 183470 . - . ID=gene-C9E93_RS20085;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9E93_RS20085;old_locus_tag=C9E93_20620 NZ_PYJV01000110.1 Protein Homology CDS 182097 183470 . - 0 ID=cds-WP_001175077.1;Parent=gene-C9E93_RS20085;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9E93_RS20085;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 183687 184328 . + . ID=gene-C9E93_RS20090;Name=C9E93_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20090;old_locus_tag=C9E93_20625 NZ_PYJV01000110.1 Protein Homology CDS 183687 184328 . + 0 ID=cds-WP_000493971.1;Parent=gene-C9E93_RS20090;Dbxref=GenBank:WP_000493971.1;Name=WP_000493971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9E93_RS20090;product=riboflavin synthase;protein_id=WP_000493971.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 184370 185518 . - . ID=gene-C9E93_RS20095;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9E93_RS20095;old_locus_tag=C9E93_20630 NZ_PYJV01000110.1 Protein Homology CDS 184370 185518 . - 0 ID=cds-WP_000098879.1;Parent=gene-C9E93_RS20095;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9E93_RS20095;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 185808 187013 . - . ID=gene-C9E93_RS20100;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=C9E93_RS20100;old_locus_tag=C9E93_20635 NZ_PYJV01000110.1 Protein Homology CDS 185808 187013 . - 0 ID=cds-WP_001182316.1;Parent=gene-C9E93_RS20100;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9E93_RS20100;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 187126 188058 . + . ID=gene-C9E93_RS20105;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=C9E93_RS20105;old_locus_tag=C9E93_20640 NZ_PYJV01000110.1 Protein Homology CDS 187126 188058 . + 0 ID=cds-WP_000269523.1;Parent=gene-C9E93_RS20105;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9E93_RS20105;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 188055 189080 . - . ID=gene-C9E93_RS20110;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9E93_RS20110;old_locus_tag=C9E93_20645 NZ_PYJV01000110.1 Protein Homology CDS 188055 189080 . - 0 ID=cds-WP_000190992.1;Parent=gene-C9E93_RS20110;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9E93_RS20110;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 189376 189465 . + . ID=gene-C9E93_RS20115;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=C9E93_RS20115;old_locus_tag=C9E93_20655 NZ_PYJV01000110.1 Protein Homology CDS 189376 189465 . + 0 ID=cds-WP_000102277.1;Parent=gene-C9E93_RS20115;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9E93_RS20115;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_000102277.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 189548 190129 . - . ID=gene-C9E93_RS20120;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=C9E93_RS20120;old_locus_tag=C9E93_20660 NZ_PYJV01000110.1 Protein Homology CDS 189548 190129 . - 0 ID=cds-WP_000007299.1;Parent=gene-C9E93_RS20120;Dbxref=GenBank:WP_000007299.1;Name=WP_000007299.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9E93_RS20120;product=superoxide dismutase [Fe];protein_id=WP_000007299.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 190256 191077 . - . ID=gene-C9E93_RS20125;Name=C9E93_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20125;old_locus_tag=C9E93_20665 NZ_PYJV01000110.1 Protein Homology CDS 190256 191077 . - 0 ID=cds-WP_001537211.1;Parent=gene-C9E93_RS20125;Dbxref=GenBank:WP_001537211.1;Name=WP_001537211.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9E93_RS20125;product=C40 family peptidase;protein_id=WP_001537211.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 191413 191760 . + . ID=gene-C9E93_RS20130;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9E93_RS20130;old_locus_tag=C9E93_20670 NZ_PYJV01000110.1 Protein Homology CDS 191413 191760 . + 0 ID=cds-WP_000108176.1;Parent=gene-C9E93_RS20130;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9E93_RS20130;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 191838 192485 . - . ID=gene-C9E93_RS20135;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9E93_RS20135;old_locus_tag=C9E93_20675 NZ_PYJV01000110.1 Protein Homology CDS 191838 192485 . - 0 ID=cds-WP_001282272.1;Parent=gene-C9E93_RS20135;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9E93_RS20135;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 192586 192993 . - . ID=gene-C9E93_RS20140;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9E93_RS20140;old_locus_tag=C9E93_20680 NZ_PYJV01000110.1 Protein Homology CDS 192586 192993 . - 0 ID=cds-WP_001237787.1;Parent=gene-C9E93_RS20140;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9E93_RS20140;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 193062 194159 . - . ID=gene-C9E93_RS20145;Name=C9E93_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20145;old_locus_tag=C9E93_20685 NZ_PYJV01000110.1 Protein Homology CDS 193062 194159 . - 0 ID=cds-WP_135370145.1;Parent=gene-C9E93_RS20145;Dbxref=GenBank:WP_135370145.1;Name=WP_135370145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9E93_RS20145;product=alkene reductase;protein_id=WP_135370145.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 194218 194817 . - . ID=gene-C9E93_RS20150;Name=C9E93_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20150;old_locus_tag=C9E93_20690 NZ_PYJV01000110.1 Protein Homology CDS 194218 194817 . - 0 ID=cds-WP_001041823.1;Parent=gene-C9E93_RS20150;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9E93_RS20150;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 194920 195159 . + . ID=gene-C9E93_RS20155;Name=C9E93_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20155;old_locus_tag=C9E93_20695 NZ_PYJV01000110.1 Protein Homology CDS 194920 195159 . + 0 ID=cds-WP_001519323.1;Parent=gene-C9E93_RS20155;Dbxref=GenBank:WP_001519323.1;Name=WP_001519323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9E93_RS20155;product=DUF1289 domain-containing protein;protein_id=WP_001519323.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 195210 196106 . + . ID=gene-C9E93_RS20160;Name=C9E93_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20160;old_locus_tag=C9E93_20700 NZ_PYJV01000110.1 Protein Homology CDS 195210 196106 . + 0 ID=cds-WP_000250716.1;Parent=gene-C9E93_RS20160;Dbxref=GenBank:WP_000250716.1;Name=WP_000250716.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9E93_RS20160;product=aldo/keto reductase;protein_id=WP_000250716.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 196186 196707 . + . ID=gene-C9E93_RS20165;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9E93_RS20165;old_locus_tag=C9E93_20705 NZ_PYJV01000110.1 Protein Homology CDS 196186 196707 . + 0 ID=cds-WP_000826813.1;Parent=gene-C9E93_RS20165;Dbxref=GenBank:WP_000826813.1;Name=WP_000826813.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9E93_RS20165;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826813.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 196683 198722 . - . ID=gene-C9E93_RS20170;Name=C9E93_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20170;old_locus_tag=C9E93_20710 NZ_PYJV01000110.1 Protein Homology CDS 196683 198722 . - 0 ID=cds-WP_000777626.1;Parent=gene-C9E93_RS20170;Dbxref=GenBank:WP_000777626.1;Name=WP_000777626.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9E93_RS20170;product=FUSC family protein;protein_id=WP_000777626.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 198722 199582 . - . ID=gene-C9E93_RS20175;Name=C9E93_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20175;old_locus_tag=C9E93_20715 NZ_PYJV01000110.1 Protein Homology CDS 198722 199582 . - 0 ID=cds-WP_001538147.1;Parent=gene-C9E93_RS20175;Dbxref=GenBank:WP_001538147.1;Name=WP_001538147.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9E93_RS20175;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001538147.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 199585 199821 . - . ID=gene-C9E93_RS20180;Name=C9E93_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20180;old_locus_tag=C9E93_20720 NZ_PYJV01000110.1 Protein Homology CDS 199585 199821 . - 0 ID=cds-WP_000649755.1;Parent=gene-C9E93_RS20180;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9E93_RS20180;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 200016 200456 . + . ID=gene-C9E93_RS20185;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9E93_RS20185;old_locus_tag=C9E93_20725 NZ_PYJV01000110.1 Protein Homology CDS 200016 200456 . + 0 ID=cds-WP_000764552.1;Parent=gene-C9E93_RS20185;Dbxref=GenBank:WP_000764552.1;Name=WP_000764552.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9E93_RS20185;product=transcriptional regulator SlyA;protein_id=WP_000764552.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 200504 200971 . - . ID=gene-C9E93_RS20190;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9E93_RS20190;old_locus_tag=C9E93_20730 NZ_PYJV01000110.1 Protein Homology CDS 200504 200971 . - 0 ID=cds-WP_000621211.1;Parent=gene-C9E93_RS20190;Dbxref=GenBank:WP_000621211.1;Name=WP_000621211.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9E93_RS20190;product=outer membrane lipoprotein SlyB;protein_id=WP_000621211.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 201243 202364 . + . ID=gene-C9E93_RS20195;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9E93_RS20195;old_locus_tag=C9E93_20735 NZ_PYJV01000110.1 Protein Homology CDS 201243 202364 . + 0 ID=cds-WP_000835021.1;Parent=gene-C9E93_RS20195;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9E93_RS20195;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 202452 202781 . + . ID=gene-C9E93_RS20200;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9E93_RS20200;old_locus_tag=C9E93_20740 NZ_PYJV01000110.1 Protein Homology CDS 202452 202781 . + 0 ID=cds-WP_135370146.1;Parent=gene-C9E93_RS20200;Dbxref=GenBank:WP_135370146.1;Name=WP_135370146.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9E93_RS20200;product=C-type lysozyme inhibitor;protein_id=WP_135370146.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 202840 203496 . + . ID=gene-C9E93_RS20205;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9E93_RS20205;old_locus_tag=C9E93_20745 NZ_PYJV01000110.1 Protein Homology CDS 202840 203496 . + 0 ID=cds-WP_001282334.1;Parent=gene-C9E93_RS20205;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9E93_RS20205;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 203623 204897 . + . ID=gene-C9E93_RS20210;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9E93_RS20210;old_locus_tag=C9E93_20750 NZ_PYJV01000110.1 Protein Homology CDS 203623 204897 . + 0 ID=cds-WP_000168626.1;Parent=gene-C9E93_RS20210;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9E93_RS20210;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 204957 205817 . + . ID=gene-C9E93_RS20215;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9E93_RS20215;old_locus_tag=C9E93_20755 NZ_PYJV01000110.1 Protein Homology CDS 204957 205817 . + 0 ID=cds-WP_135370147.1;Parent=gene-C9E93_RS20215;Dbxref=GenBank:WP_135370147.1;Name=WP_135370147.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9E93_RS20215;product=pyridoxal kinase PdxY;protein_id=WP_135370147.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 205876 206481 . - . ID=gene-C9E93_RS20220;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9E93_RS20220;old_locus_tag=C9E93_20760 NZ_PYJV01000110.1 Protein Homology CDS 205876 206481 . - 0 ID=cds-WP_000765727.1;Parent=gene-C9E93_RS20220;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9E93_RS20220;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 206586 208091 . - . ID=gene-C9E93_RS20225;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9E93_RS20225;old_locus_tag=C9E93_20765 NZ_PYJV01000110.1 Protein Homology CDS 206586 208091 . - 0 ID=cds-WP_000100911.1;Parent=gene-C9E93_RS20225;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9E93_RS20225;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 208693 209328 . - . ID=gene-C9E93_RS20230;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9E93_RS20230;old_locus_tag=C9E93_20770 NZ_PYJV01000110.1 Protein Homology CDS 208693 209328 . - 0 ID=cds-WP_001030318.1;Parent=gene-C9E93_RS20230;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9E93_RS20230;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 209328 210020 . - . ID=gene-C9E93_RS20235;Name=C9E93_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20235;old_locus_tag=C9E93_20775 NZ_PYJV01000110.1 Protein Homology CDS 209328 210020 . - 0 ID=cds-WP_001289628.1;Parent=gene-C9E93_RS20235;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9E93_RS20235;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 210023 210643 . - . ID=gene-C9E93_RS20240;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9E93_RS20240;old_locus_tag=C9E93_20780 NZ_PYJV01000110.1 Protein Homology CDS 210023 210643 . - 0 ID=cds-WP_000920822.1;Parent=gene-C9E93_RS20240;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9E93_RS20240;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_PYJV01000110.1 RefSeq gene 210647 211705 . - . ID=gene-C9E93_RS20245;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9E93_RS20245;old_locus_tag=C9E93_20785 NZ_PYJV01000110.1 Protein Homology CDS 210647 211705 . - 0 ID=cds-WP_000231891.1;Parent=gene-C9E93_RS20245;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9E93_RS20245;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11 NZ_PYJV01000110.1 RefSeq pseudogene 211706 212068 . - . ID=gene-C9E93_RS20250;Name=C9E93_RS20250;end_range=212068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS20250;old_locus_tag=C9E93_20790;partial=true;pseudo=true NZ_PYJV01000110.1 Protein Homology CDS 211706 212068 . - 0 ID=cds-C9E93_RS20250;Parent=gene-C9E93_RS20250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=212068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505351.1;locus_tag=C9E93_RS20250;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000083.1 1 85314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000083.1 RefSeq region 1 85314 . + . ID=NZ_PYJV01000083.1:1..85314;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000083.1 RefSeq gene 87 938 . - . ID=gene-C9E93_RS14465;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9E93_RS14465;old_locus_tag=C9E93_14835 NZ_PYJV01000083.1 Protein Homology CDS 87 938 . - 0 ID=cds-WP_135370487.1;Parent=gene-C9E93_RS14465;Dbxref=GenBank:WP_135370487.1;Name=WP_135370487.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9E93_RS14465;product=glutamate racemase;protein_id=WP_135370487.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 883 2727 . - . ID=gene-C9E93_RS14470;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9E93_RS14470;old_locus_tag=C9E93_14840 NZ_PYJV01000083.1 Protein Homology CDS 883 2727 . - 0 ID=cds-WP_023195935.1;Parent=gene-C9E93_RS14470;Dbxref=GenBank:WP_023195935.1;Name=WP_023195935.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9E93_RS14470;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_023195935.1;transl_table=11 NZ_PYJV01000083.1 cmsearch riboswitch 2794 2986 . - . ID=id-NZ_PYJV01000083.1:2794..2986;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000083.1 RefSeq gene 3101 4201 . + . ID=gene-C9E93_RS14475;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9E93_RS14475;old_locus_tag=C9E93_14845 NZ_PYJV01000083.1 Protein Homology CDS 3101 4201 . + 0 ID=cds-WP_135370486.1;Parent=gene-C9E93_RS14475;Dbxref=GenBank:WP_135370486.1;Name=WP_135370486.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9E93_RS14475;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_135370486.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 4248 4607 . - . ID=gene-C9E93_RS14480;Name=C9E93_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14480;old_locus_tag=C9E93_14850 NZ_PYJV01000083.1 Protein Homology CDS 4248 4607 . - 0 ID=cds-WP_000813838.1;Parent=gene-C9E93_RS14480;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9E93_RS14480;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 4623 5258 . - . ID=gene-C9E93_RS14485;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9E93_RS14485;old_locus_tag=C9E93_14855 NZ_PYJV01000083.1 Protein Homology CDS 4623 5258 . - 0 ID=cds-WP_000971958.1;Parent=gene-C9E93_RS14485;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9E93_RS14485;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 5457 6857 . + . ID=gene-C9E93_RS14490;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E93_RS14490;old_locus_tag=C9E93_14865 NZ_PYJV01000083.1 Protein Homology CDS 5457 6857 . + 0 ID=cds-WP_001120791.1;Parent=gene-C9E93_RS14490;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9E93_RS14490;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 6840 7757 . - . ID=gene-C9E93_RS14495;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9E93_RS14495;old_locus_tag=C9E93_14870 NZ_PYJV01000083.1 Protein Homology CDS 6840 7757 . - 0 ID=cds-WP_001025919.1;Parent=gene-C9E93_RS14495;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9E93_RS14495;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 8042 9418 . - . ID=gene-C9E93_RS14505;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9E93_RS14505;old_locus_tag=C9E93_14880 NZ_PYJV01000083.1 Protein Homology CDS 8042 9418 . - 0 ID=cds-WP_001230054.1;Parent=gene-C9E93_RS14505;Dbxref=GenBank:WP_001230054.1;Name=WP_001230054.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9E93_RS14505;product=argininosuccinate lyase;protein_id=WP_001230054.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 9536 10312 . - . ID=gene-C9E93_RS14510;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9E93_RS14510;old_locus_tag=C9E93_14885 NZ_PYJV01000083.1 Protein Homology CDS 9536 10312 . - 0 ID=cds-WP_001575262.1;Parent=gene-C9E93_RS14510;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9E93_RS14510;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 10320 11324 . - . ID=gene-C9E93_RS14515;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=C9E93_RS14515;old_locus_tag=C9E93_14890 NZ_PYJV01000083.1 Protein Homology CDS 10320 11324 . - 0 ID=cds-WP_000935332.1;Parent=gene-C9E93_RS14515;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9E93_RS14515;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 11413 12564 . + . ID=gene-C9E93_RS14520;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9E93_RS14520;old_locus_tag=C9E93_14895 NZ_PYJV01000083.1 Protein Homology CDS 11413 12564 . + 0 ID=cds-WP_000800208.1;Parent=gene-C9E93_RS14520;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9E93_RS14520;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 12933 15584 . + . ID=gene-C9E93_RS14525;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9E93_RS14525;old_locus_tag=C9E93_14905 NZ_PYJV01000083.1 Protein Homology CDS 12933 15584 . + 0 ID=cds-WP_001005548.1;Parent=gene-C9E93_RS14525;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9E93_RS14525;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 15795 17528 . + . ID=gene-C9E93_RS14530;Name=C9E93_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14530;old_locus_tag=C9E93_14910 NZ_PYJV01000083.1 Protein Homology CDS 15795 17528 . + 0 ID=cds-WP_001528929.1;Parent=gene-C9E93_RS14530;Dbxref=GenBank:WP_001528929.1;Name=WP_001528929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9E93_RS14530;product=phosphoethanolamine transferase CptA;protein_id=WP_001528929.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 17689 18525 . + . ID=gene-C9E93_RS14535;Name=C9E93_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14535;old_locus_tag=C9E93_14915 NZ_PYJV01000083.1 Protein Homology CDS 17689 18525 . + 0 ID=cds-WP_000274592.1;Parent=gene-C9E93_RS14535;Dbxref=GenBank:WP_000274592.1;Name=WP_000274592.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=C9E93_RS14535;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274592.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 18780 19442 . + . ID=gene-C9E93_RS14540;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9E93_RS14540;old_locus_tag=C9E93_14920 NZ_PYJV01000083.1 Protein Homology CDS 18780 19442 . + 0 ID=cds-WP_000424866.1;Parent=gene-C9E93_RS14540;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9E93_RS14540;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 19454 20557 . + . ID=gene-C9E93_RS14545;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9E93_RS14545;old_locus_tag=C9E93_14925 NZ_PYJV01000083.1 Protein Homology CDS 19454 20557 . + 0 ID=cds-WP_000374031.1;Parent=gene-C9E93_RS14545;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9E93_RS14545;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 20816 21439 . + . ID=gene-C9E93_RS14550;Name=C9E93_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14550;old_locus_tag=C9E93_14930 NZ_PYJV01000083.1 Protein Homology CDS 20816 21439 . + 0 ID=cds-WP_000666689.1;Parent=gene-C9E93_RS14550;Dbxref=GenBank:WP_000666689.1;Name=WP_000666689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9E93_RS14550;product=DUF1287 domain-containing protein;protein_id=WP_000666689.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 21497 23677 . - . ID=gene-C9E93_RS14555;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9E93_RS14555;old_locus_tag=C9E93_14935 NZ_PYJV01000083.1 Protein Homology CDS 21497 23677 . - 0 ID=cds-WP_000108103.1;Parent=gene-C9E93_RS14555;Dbxref=GenBank:WP_000108103.1;Name=WP_000108103.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9E93_RS14555;product=catalase/peroxidase HPI;protein_id=WP_000108103.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 23842 24732 . - . ID=gene-C9E93_RS14560;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9E93_RS14560;old_locus_tag=C9E93_14940 NZ_PYJV01000083.1 Protein Homology CDS 23842 24732 . - 0 ID=cds-WP_000007508.1;Parent=gene-C9E93_RS14560;Dbxref=GenBank:WP_000007508.1;Name=WP_000007508.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9E93_RS14560;product=methylenetetrahydrofolate reductase;protein_id=WP_000007508.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 25011 26492 . + . ID=gene-C9E93_RS14570;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=C9E93_RS14570;old_locus_tag=C9E93_14950 NZ_PYJV01000083.1 Protein Homology CDS 25011 26492 . + 0 ID=cds-WP_135370484.1;Parent=gene-C9E93_RS14570;Dbxref=GenBank:WP_135370484.1;Name=WP_135370484.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=C9E93_RS14570;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_135370484.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 26437 27543 . - . ID=gene-C9E93_RS14575;Name=C9E93_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14575;old_locus_tag=C9E93_14955 NZ_PYJV01000083.1 Protein Homology CDS 26437 27543 . - 0 ID=cds-WP_135370483.1;Parent=gene-C9E93_RS14575;Dbxref=GenBank:WP_135370483.1;Name=WP_135370483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=C9E93_RS14575;product=alanine racemase;protein_id=WP_135370483.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 27540 28778 . - . ID=gene-C9E93_RS14580;Name=C9E93_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14580;old_locus_tag=C9E93_14960 NZ_PYJV01000083.1 Protein Homology CDS 27540 28778 . - 0 ID=cds-WP_167851649.1;Parent=gene-C9E93_RS14580;Dbxref=GenBank:WP_167851649.1;Name=WP_167851649.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=C9E93_RS14580;product=serine hydroxymethyltransferase;protein_id=WP_167851649.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 29043 30599 . - . ID=gene-C9E93_RS14585;Name=C9E93_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14585;old_locus_tag=C9E93_14965 NZ_PYJV01000083.1 Protein Homology CDS 29043 30599 . - 0 ID=cds-WP_135370482.1;Parent=gene-C9E93_RS14585;Dbxref=GenBank:WP_135370482.1;Name=WP_135370482.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9E93_RS14585;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_135370482.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 30735 31859 . + . ID=gene-C9E93_RS14590;Name=C9E93_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14590;old_locus_tag=C9E93_14970 NZ_PYJV01000083.1 Protein Homology CDS 30735 31859 . + 0 ID=cds-WP_135370481.1;Parent=gene-C9E93_RS14590;Dbxref=GenBank:WP_135370481.1;Name=WP_135370481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9E93_RS14590;product=cytoplasmic protein;protein_id=WP_135370481.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 32094 33092 . + . ID=gene-C9E93_RS14595;Name=C9E93_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14595;old_locus_tag=C9E93_14975 NZ_PYJV01000083.1 Protein Homology CDS 32094 33092 . + 0 ID=cds-WP_023993650.1;Parent=gene-C9E93_RS14595;Dbxref=GenBank:WP_023993650.1;Name=WP_023993650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9E93_RS14595;product=hypothetical protein;protein_id=WP_023993650.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 33095 33952 . + . ID=gene-C9E93_RS14600;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9E93_RS14600;old_locus_tag=C9E93_14980 NZ_PYJV01000083.1 Protein Homology CDS 33095 33952 . + 0 ID=cds-WP_000398251.1;Parent=gene-C9E93_RS14600;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9E93_RS14600;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 34068 36500 . - . ID=gene-C9E93_RS14605;Name=C9E93_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14605;old_locus_tag=C9E93_14985 NZ_PYJV01000083.1 Protein Homology CDS 34068 36500 . - 0 ID=cds-WP_000110805.1;Parent=gene-C9E93_RS14605;Dbxref=GenBank:WP_000110805.1;Name=WP_000110805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9E93_RS14605;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110805.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 36503 37663 . - . ID=gene-C9E93_RS14610;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=C9E93_RS14610;old_locus_tag=C9E93_14990 NZ_PYJV01000083.1 Protein Homology CDS 36503 37663 . - 0 ID=cds-WP_000197216.1;Parent=gene-C9E93_RS14610;Dbxref=GenBank:WP_000197216.1;Name=WP_000197216.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9E93_RS14610;product=cystathionine gamma-synthase;protein_id=WP_000197216.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 37928 38245 . + . ID=gene-C9E93_RS14615;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9E93_RS14615;old_locus_tag=C9E93_14995 NZ_PYJV01000083.1 Protein Homology CDS 37928 38245 . + 0 ID=cds-WP_000852811.1;Parent=gene-C9E93_RS14615;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9E93_RS14615;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 38702 40492 . + . ID=gene-C9E93_RS14620;Name=C9E93_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14620;old_locus_tag=C9E93_15000 NZ_PYJV01000083.1 Protein Homology CDS 38702 40492 . + 0 ID=cds-WP_000899639.1;Parent=gene-C9E93_RS14620;Dbxref=GenBank:WP_000899639.1;Name=WP_000899639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9E93_RS14620;product=aryl-sulfate sulfotransferase;protein_id=WP_000899639.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 40693 41355 . + . ID=gene-C9E93_RS14625;Name=C9E93_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14625;old_locus_tag=C9E93_15005 NZ_PYJV01000083.1 Protein Homology CDS 40693 41355 . + 0 ID=cds-WP_000792803.1;Parent=gene-C9E93_RS14625;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9E93_RS14625;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 41400 41612 . - . ID=gene-C9E93_RS14630;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9E93_RS14630;old_locus_tag=C9E93_15010 NZ_PYJV01000083.1 Protein Homology CDS 41400 41612 . - 0 ID=cds-WP_000715284.1;Parent=gene-C9E93_RS14630;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9E93_RS14630;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 41816 44014 . + . ID=gene-C9E93_RS14635;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9E93_RS14635;old_locus_tag=C9E93_15015 NZ_PYJV01000083.1 Protein Homology CDS 41816 44014 . + 0 ID=cds-WP_000109397.1;Parent=gene-C9E93_RS14635;Dbxref=GenBank:WP_000109397.1;Name=WP_000109397.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9E93_RS14635;product=primosomal protein N';protein_id=WP_000109397.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 44169 45194 . + . ID=gene-C9E93_RS14640;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9E93_RS14640;old_locus_tag=C9E93_15020 NZ_PYJV01000083.1 Protein Homology CDS 44169 45194 . + 0 ID=cds-WP_000841337.1;Parent=gene-C9E93_RS14640;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9E93_RS14640;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 45288 46262 . + . ID=gene-C9E93_RS14645;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9E93_RS14645;old_locus_tag=C9E93_15025 NZ_PYJV01000083.1 Protein Homology CDS 45288 46262 . + 0 ID=cds-WP_000068811.1;Parent=gene-C9E93_RS14645;Dbxref=GenBank:WP_000068811.1;Name=WP_000068811.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9E93_RS14645;product=cell division protein FtsN;protein_id=WP_000068811.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 46354 46884 . + . ID=gene-C9E93_RS14650;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9E93_RS14650;old_locus_tag=C9E93_15030 NZ_PYJV01000083.1 Protein Homology CDS 46354 46884 . + 0 ID=cds-WP_000208240.1;Parent=gene-C9E93_RS14650;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9E93_RS14650;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 46894 48225 . + . ID=gene-C9E93_RS14655;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9E93_RS14655;old_locus_tag=C9E93_15035 NZ_PYJV01000083.1 Protein Homology CDS 46894 48225 . + 0 ID=cds-WP_001293360.1;Parent=gene-C9E93_RS14655;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9E93_RS14655;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 48292 49221 . + . ID=gene-C9E93_RS14660;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9E93_RS14660;old_locus_tag=C9E93_15040 NZ_PYJV01000083.1 Protein Homology CDS 48292 49221 . + 0 ID=cds-WP_000139639.1;Parent=gene-C9E93_RS14660;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9E93_RS14660;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 49314 49799 . + . ID=gene-C9E93_RS14665;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9E93_RS14665;old_locus_tag=C9E93_15045 NZ_PYJV01000083.1 Protein Homology CDS 49314 49799 . + 0 ID=cds-WP_000872918.1;Parent=gene-C9E93_RS14665;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9E93_RS14665;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 50021 50260 . - . ID=gene-C9E93_RS14670;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9E93_RS14670;old_locus_tag=C9E93_15050 NZ_PYJV01000083.1 Protein Homology CDS 50021 50260 . - 0 ID=cds-WP_000051370.1;Parent=gene-C9E93_RS14670;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9E93_RS14670;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 50659 51504 . + . ID=gene-C9E93_RS14675;Name=C9E93_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14675;old_locus_tag=C9E93_15055 NZ_PYJV01000083.1 Protein Homology CDS 50659 51504 . + 0 ID=cds-WP_000084285.1;Parent=gene-C9E93_RS14675;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9E93_RS14675;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 51525 53033 . + . ID=gene-C9E93_RS14680;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9E93_RS14680;old_locus_tag=C9E93_15060 NZ_PYJV01000083.1 Protein Homology CDS 51525 53033 . + 0 ID=cds-WP_000136808.1;Parent=gene-C9E93_RS14680;Dbxref=GenBank:WP_000136808.1;Name=WP_000136808.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9E93_RS14680;product=glycerol kinase GlpK;protein_id=WP_000136808.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 53145 54155 . + . ID=gene-C9E93_RS14685;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9E93_RS14685;old_locus_tag=C9E93_15065 NZ_PYJV01000083.1 Protein Homology CDS 53145 54155 . + 0 ID=cds-WP_001250624.1;Parent=gene-C9E93_RS14685;Dbxref=GenBank:WP_001250624.1;Name=WP_001250624.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9E93_RS14685;product=class II fructose-bisphosphatase;protein_id=WP_001250624.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 54252 54998 . + . ID=gene-C9E93_RS14690;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9E93_RS14690;old_locus_tag=C9E93_15070 NZ_PYJV01000083.1 Protein Homology CDS 54252 54998 . + 0 ID=cds-WP_000796292.1;Parent=gene-C9E93_RS14690;Dbxref=GenBank:WP_000796292.1;Name=WP_000796292.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9E93_RS14690;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796292.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 55108 55536 . - . ID=gene-C9E93_RS14695;Name=C9E93_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14695;old_locus_tag=C9E93_15075 NZ_PYJV01000083.1 Protein Homology CDS 55108 55536 . - 0 ID=cds-WP_000155237.1;Parent=gene-C9E93_RS14695;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=C9E93_RS14695;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 55637 56233 . + . ID=gene-C9E93_RS14700;Name=C9E93_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14700;old_locus_tag=C9E93_15080 NZ_PYJV01000083.1 Protein Homology CDS 55637 56233 . + 0 ID=cds-WP_000802241.1;Parent=gene-C9E93_RS14700;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9E93_RS14700;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 56346 57113 . + . ID=gene-C9E93_RS14705;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9E93_RS14705;old_locus_tag=C9E93_15085 NZ_PYJV01000083.1 Protein Homology CDS 56346 57113 . + 0 ID=cds-WP_001216339.1;Parent=gene-C9E93_RS14705;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9E93_RS14705;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 57205 57969 . - . ID=gene-C9E93_RS14710;Name=C9E93_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14710;old_locus_tag=C9E93_15090 NZ_PYJV01000083.1 Protein Homology CDS 57205 57969 . - 0 ID=cds-WP_001088047.1;Parent=gene-C9E93_RS14710;Dbxref=GenBank:WP_001088047.1;Name=WP_001088047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9E93_RS14710;product=epimerase;protein_id=WP_001088047.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 57979 58269 . - . ID=gene-C9E93_RS14715;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9E93_RS14715;old_locus_tag=C9E93_15095 NZ_PYJV01000083.1 Protein Homology CDS 57979 58269 . - 0 ID=cds-WP_001543603.1;Parent=gene-C9E93_RS14715;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9E93_RS14715;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 58352 59227 . - . ID=gene-C9E93_RS14720;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9E93_RS14720;old_locus_tag=C9E93_15100 NZ_PYJV01000083.1 Protein Homology CDS 58352 59227 . - 0 ID=cds-WP_000774146.1;Parent=gene-C9E93_RS14720;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9E93_RS14720;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 59256 60278 . - . ID=gene-C9E93_RS14725;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9E93_RS14725;old_locus_tag=C9E93_15105 NZ_PYJV01000083.1 Protein Homology CDS 59256 60278 . - 0 ID=cds-WP_000090737.1;Parent=gene-C9E93_RS14725;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9E93_RS14725;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 60307 61308 . - . ID=gene-C9E93_RS14730;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9E93_RS14730;old_locus_tag=C9E93_15110 NZ_PYJV01000083.1 Protein Homology CDS 60307 61308 . - 0 ID=cds-WP_000981831.1;Parent=gene-C9E93_RS14730;Dbxref=GenBank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9E93_RS14730;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 61305 62348 . - . ID=gene-C9E93_RS14735;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9E93_RS14735;old_locus_tag=C9E93_15115 NZ_PYJV01000083.1 Protein Homology CDS 61305 62348 . - 0 ID=cds-WP_000911133.1;Parent=gene-C9E93_RS14735;Dbxref=GenBank:WP_000911133.1;Name=WP_000911133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9E93_RS14735;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911133.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 62342 63877 . - . ID=gene-C9E93_RS14740;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=C9E93_RS14740;old_locus_tag=C9E93_15120 NZ_PYJV01000083.1 Protein Homology CDS 62342 63877 . - 0 ID=cds-WP_001167248.1;Parent=gene-C9E93_RS14740;Dbxref=GenBank:WP_001167248.1;Name=WP_001167248.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9E93_RS14740;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167248.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 64135 65094 . + . ID=gene-C9E93_RS14745;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9E93_RS14745;old_locus_tag=C9E93_15125 NZ_PYJV01000083.1 Protein Homology CDS 64135 65094 . + 0 ID=cds-WP_001283049.1;Parent=gene-C9E93_RS14745;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9E93_RS14745;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 65182 66774 . + . ID=gene-C9E93_RS14750;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9E93_RS14750;old_locus_tag=C9E93_15130 NZ_PYJV01000083.1 Protein Homology CDS 65182 66774 . + 0 ID=cds-WP_000113084.1;Parent=gene-C9E93_RS14750;Dbxref=GenBank:WP_000113084.1;Name=WP_000113084.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9E93_RS14750;product=autoinducer-2 kinase;protein_id=WP_000113084.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 66788 67138 . + . ID=gene-C9E93_RS14755;Name=C9E93_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14755;old_locus_tag=C9E93_15135 NZ_PYJV01000083.1 Protein Homology CDS 66788 67138 . + 0 ID=cds-WP_001173080.1;Parent=gene-C9E93_RS14755;Dbxref=GenBank:WP_001173080.1;Name=WP_001173080.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9E93_RS14755;product=cupin domain-containing protein;protein_id=WP_001173080.1;transl_table=11 NZ_PYJV01000083.1 RefSeq pseudogene 67228 67368 . - . ID=gene-C9E93_RS23755;Name=C9E93_RS23755;end_range=67368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23755;old_locus_tag=C9E93_15140;partial=true;pseudo=true NZ_PYJV01000083.1 Protein Homology CDS 67228 67368 . - 0 ID=cds-C9E93_RS23755;Parent=gene-C9E93_RS23755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=67368,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E93_RS23755;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_PYJV01000083.1 RefSeq pseudogene 67414 67539 . - . ID=gene-C9E93_RS23760;Name=C9E93_RS23760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23760;old_locus_tag=C9E93_15145;partial=true;pseudo=true;start_range=.,67414 NZ_PYJV01000083.1 Protein Homology CDS 67414 67539 . - 0 ID=cds-C9E93_RS23760;Parent=gene-C9E93_RS23760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=C9E93_RS23760;partial=true;product=hypothetical protein;pseudo=true;start_range=.,67414;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 67637 68359 . - . ID=gene-C9E93_RS14770;Name=C9E93_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14770;old_locus_tag=C9E93_15150 NZ_PYJV01000083.1 Protein Homology CDS 67637 68359 . - 0 ID=cds-WP_001519915.1;Parent=gene-C9E93_RS14770;Dbxref=GenBank:WP_001519915.1;Name=WP_001519915.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9E93_RS14770;product=GntR family transcriptional regulator;protein_id=WP_001519915.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 68422 69462 . - . ID=gene-C9E93_RS14775;Name=C9E93_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14775;old_locus_tag=C9E93_15155 NZ_PYJV01000083.1 Protein Homology CDS 68422 69462 . - 0 ID=cds-WP_000557884.1;Parent=gene-C9E93_RS14775;Dbxref=GenBank:WP_000557884.1;Name=WP_000557884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9E93_RS14775;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557884.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 69472 70431 . - . ID=gene-C9E93_RS14780;Name=C9E93_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14780;old_locus_tag=C9E93_15160 NZ_PYJV01000083.1 Protein Homology CDS 69472 70431 . - 0 ID=cds-WP_111742525.1;Parent=gene-C9E93_RS14780;Dbxref=GenBank:WP_111742525.1;Name=WP_111742525.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9E93_RS14780;product=aminoimidazole riboside kinase;protein_id=WP_111742525.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 70442 71776 . - . ID=gene-C9E93_RS14785;Name=C9E93_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14785;old_locus_tag=C9E93_15165 NZ_PYJV01000083.1 Protein Homology CDS 70442 71776 . - 0 ID=cds-WP_000777314.1;Parent=gene-C9E93_RS14785;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9E93_RS14785;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 72041 72796 . - . ID=gene-C9E93_RS14790;Name=C9E93_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14790;old_locus_tag=C9E93_15170 NZ_PYJV01000083.1 Protein Homology CDS 72041 72796 . - 0 ID=cds-WP_000750762.1;Parent=gene-C9E93_RS14790;Dbxref=GenBank:WP_000750762.1;Name=WP_000750762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E93_RS14790;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750762.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 72897 73886 . - . ID=gene-C9E93_RS14795;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=C9E93_RS14795;old_locus_tag=C9E93_15175 NZ_PYJV01000083.1 Protein Homology CDS 72897 73886 . - 0 ID=cds-WP_001523784.1;Parent=gene-C9E93_RS14795;Dbxref=GenBank:WP_001523784.1;Name=WP_001523784.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9E93_RS14795;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001523784.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 74090 75052 . - . ID=gene-C9E93_RS14800;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9E93_RS14800;old_locus_tag=C9E93_15180 NZ_PYJV01000083.1 Protein Homology CDS 74090 75052 . - 0 ID=cds-WP_000591793.1;Parent=gene-C9E93_RS14800;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9E93_RS14800;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 75237 76139 . - . ID=gene-C9E93_RS14805;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9E93_RS14805;old_locus_tag=C9E93_15185 NZ_PYJV01000083.1 Protein Homology CDS 75237 76139 . - 0 ID=cds-WP_001077320.1;Parent=gene-C9E93_RS14805;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9E93_RS14805;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 76287 76787 . - . ID=gene-C9E93_RS14810;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9E93_RS14810;old_locus_tag=C9E93_15190 NZ_PYJV01000083.1 Protein Homology CDS 76287 76787 . - 0 ID=cds-WP_001233463.1;Parent=gene-C9E93_RS14810;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9E93_RS14810;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 76938 77636 . + . ID=gene-C9E93_RS14815;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=C9E93_RS14815;old_locus_tag=C9E93_15195 NZ_PYJV01000083.1 Protein Homology CDS 76938 77636 . + 0 ID=cds-WP_001033731.1;Parent=gene-C9E93_RS14815;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9E93_RS14815;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 77633 79006 . + . ID=gene-C9E93_RS14820;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9E93_RS14820;old_locus_tag=C9E93_15200 NZ_PYJV01000083.1 Protein Homology CDS 77633 79006 . + 0 ID=cds-WP_000580402.1;Parent=gene-C9E93_RS14820;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9E93_RS14820;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 79054 79257 . - . ID=gene-C9E93_RS14825;Name=C9E93_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14825;old_locus_tag=C9E93_15205 NZ_PYJV01000083.1 Protein Homology CDS 79054 79257 . - 0 ID=cds-WP_000338672.1;Parent=gene-C9E93_RS14825;Dbxref=GenBank:WP_000338672.1;Name=WP_000338672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9E93_RS14825;product=hypothetical protein;protein_id=WP_000338672.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 79378 79773 . - . ID=gene-C9E93_RS14830;Name=C9E93_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14830;old_locus_tag=C9E93_15210 NZ_PYJV01000083.1 Protein Homology CDS 79378 79773 . - 0 ID=cds-WP_000133442.1;Parent=gene-C9E93_RS14830;Dbxref=GenBank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9E93_RS14830;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 79785 80474 . - . ID=gene-C9E93_RS14835;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9E93_RS14835;old_locus_tag=C9E93_15215 NZ_PYJV01000083.1 Protein Homology CDS 79785 80474 . - 0 ID=cds-WP_023221176.1;Parent=gene-C9E93_RS14835;Dbxref=GenBank:WP_023221176.1;Name=WP_023221176.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9E93_RS14835;product=6-hydroxyaminopurine reductase;protein_id=WP_023221176.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 80544 81164 . - . ID=gene-C9E93_RS14840;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9E93_RS14840;old_locus_tag=C9E93_15220 NZ_PYJV01000083.1 Protein Homology CDS 80544 81164 . - 0 ID=cds-WP_000122632.1;Parent=gene-C9E93_RS14840;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9E93_RS14840;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 81493 82476 . + . ID=gene-C9E93_RS14845;Name=C9E93_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14845;old_locus_tag=C9E93_15225 NZ_PYJV01000083.1 Protein Homology CDS 81493 82476 . + 0 ID=cds-WP_000812822.1;Parent=gene-C9E93_RS14845;Dbxref=GenBank:WP_000812822.1;Name=WP_000812822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9E93_RS14845;product=TRAP transporter substrate-binding protein;protein_id=WP_000812822.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 82495 83010 . + . ID=gene-C9E93_RS14850;Name=C9E93_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14850;old_locus_tag=C9E93_15230 NZ_PYJV01000083.1 Protein Homology CDS 82495 83010 . + 0 ID=cds-WP_001091413.1;Parent=gene-C9E93_RS14850;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9E93_RS14850;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 83003 84310 . + . ID=gene-C9E93_RS14855;Name=C9E93_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14855;old_locus_tag=C9E93_15235 NZ_PYJV01000083.1 Protein Homology CDS 83003 84310 . + 0 ID=cds-WP_000566800.1;Parent=gene-C9E93_RS14855;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9E93_RS14855;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_PYJV01000083.1 RefSeq gene 84468 85151 . - . ID=gene-C9E93_RS14860;Name=C9E93_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14860;old_locus_tag=C9E93_15240 NZ_PYJV01000083.1 Protein Homology CDS 84468 85151 . - 0 ID=cds-WP_000378721.1;Parent=gene-C9E93_RS14860;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9E93_RS14860;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 ##sequence-region NZ_PYJV01000063.1 1 82135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000063.1 RefSeq region 1 82135 . + . ID=NZ_PYJV01000063.1:1..82135;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000063.1 RefSeq gene 21 1562 . + . ID=gene-C9E93_RS10100;Name=C9E93_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10100;old_locus_tag=C9E93_10350 NZ_PYJV01000063.1 Protein Homology CDS 21 1562 . + 0 ID=cds-WP_135400609.1;Parent=gene-C9E93_RS10100;Dbxref=GenBank:WP_135400609.1;Name=WP_135400609.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813703.1;locus_tag=C9E93_RS10100;product=sulfatase-like hydrolase/transferase;protein_id=WP_135400609.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 1631 2485 . - . ID=gene-C9E93_RS10105;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=C9E93_RS10105;old_locus_tag=C9E93_10355 NZ_PYJV01000063.1 Protein Homology CDS 1631 2485 . - 0 ID=cds-WP_080187682.1;Parent=gene-C9E93_RS10105;Dbxref=GenBank:WP_080187682.1;Name=WP_080187682.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950287.1;locus_tag=C9E93_RS10105;product=protein YibB;protein_id=WP_080187682.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 2636 3205 . - . ID=gene-C9E93_RS10110;Name=C9E93_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10110;old_locus_tag=C9E93_10360 NZ_PYJV01000063.1 Protein Homology CDS 2636 3205 . - 0 ID=cds-WP_135400610.1;Parent=gene-C9E93_RS10110;Dbxref=GenBank:WP_135400610.1;Name=WP_135400610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=C9E93_RS10110;product=tail fiber assembly protein;protein_id=WP_135400610.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 3195 4019 . - . ID=gene-C9E93_RS10115;Name=C9E93_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10115;old_locus_tag=C9E93_10365 NZ_PYJV01000063.1 Protein Homology CDS 3195 4019 . - 0 ID=cds-WP_079942632.1;Parent=gene-C9E93_RS10115;Dbxref=GenBank:WP_079942632.1;Name=WP_079942632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=C9E93_RS10115;product=macro domain-containing protein;protein_id=WP_079942632.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 4016 4888 . - . ID=gene-C9E93_RS23885;Name=C9E93_RS23885;end_range=4888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23885;partial=true;pseudo=true NZ_PYJV01000063.1 Protein Homology CDS 4016 4888 . - 0 ID=cds-C9E93_RS23885;Parent=gene-C9E93_RS23885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=C9E93_RS23885;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 5457 6059 . - . ID=gene-C9E93_RS10125;Name=C9E93_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10125;old_locus_tag=C9E93_10375 NZ_PYJV01000063.1 Protein Homology CDS 5457 6059 . - 0 ID=cds-WP_001181748.1;Parent=gene-C9E93_RS10125;Dbxref=GenBank:WP_001181748.1;Name=WP_001181748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181748.1;locus_tag=C9E93_RS10125;product=DUF2612 domain-containing protein;protein_id=WP_001181748.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 6061 7302 . - . ID=gene-C9E93_RS10130;Name=C9E93_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10130;old_locus_tag=C9E93_10380 NZ_PYJV01000063.1 Protein Homology CDS 6061 7302 . - 0 ID=cds-WP_023257605.1;Parent=gene-C9E93_RS10130;Dbxref=GenBank:WP_023257605.1;Name=WP_023257605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748481.1;locus_tag=C9E93_RS10130;product=baseplate J/gp47 family protein;protein_id=WP_023257605.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 7299 7655 . - . ID=gene-C9E93_RS10135;Name=C9E93_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10135;old_locus_tag=C9E93_10385 NZ_PYJV01000063.1 Protein Homology CDS 7299 7655 . - 0 ID=cds-WP_135370604.1;Parent=gene-C9E93_RS10135;Dbxref=GenBank:WP_135370604.1;Name=WP_135370604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191864.1;locus_tag=C9E93_RS10135;product=hypothetical protein;protein_id=WP_135370604.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 7668 8345 . - . ID=gene-C9E93_RS10140;Name=C9E93_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10140;old_locus_tag=C9E93_10390 NZ_PYJV01000063.1 Protein Homology CDS 7668 8345 . - 0 ID=cds-WP_023257603.1;Parent=gene-C9E93_RS10140;Dbxref=GenBank:WP_023257603.1;Name=WP_023257603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534334.1;locus_tag=C9E93_RS10140;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_023257603.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 8326 9195 . - . ID=gene-C9E93_RS10145;Name=C9E93_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10145;old_locus_tag=C9E93_10395 NZ_PYJV01000063.1 Protein Homology CDS 8326 9195 . - 0 ID=cds-WP_000122818.1;Parent=gene-C9E93_RS10145;Dbxref=GenBank:WP_000122818.1;Name=WP_000122818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122181.1;locus_tag=C9E93_RS10145;product=baseplate hub protein;protein_id=WP_000122818.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 9192 9494 . - . ID=gene-C9E93_RS10150;Name=C9E93_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10150;old_locus_tag=C9E93_10400 NZ_PYJV01000063.1 Protein Homology CDS 9192 9494 . - 0 ID=cds-WP_000890115.1;Parent=gene-C9E93_RS10150;Dbxref=GenBank:WP_000890115.1;Name=WP_000890115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534376.1;locus_tag=C9E93_RS10150;product=phage baseplate plug family protein;protein_id=WP_000890115.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 9494 10204 . - . ID=gene-C9E93_RS10155;Name=C9E93_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10155;old_locus_tag=C9E93_10405 NZ_PYJV01000063.1 Protein Homology CDS 9494 10204 . - 0 ID=cds-WP_001525483.1;Parent=gene-C9E93_RS10155;Dbxref=GenBank:WP_001525483.1;Name=WP_001525483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010340.1;locus_tag=C9E93_RS10155;product=phage baseplate protein;protein_id=WP_001525483.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 10201 12372 . - . ID=gene-C9E93_RS10160;Name=C9E93_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10160;old_locus_tag=C9E93_10410 NZ_PYJV01000063.1 Protein Homology CDS 10201 12372 . - 0 ID=cds-WP_135370605.1;Parent=gene-C9E93_RS10160;Dbxref=GenBank:WP_135370605.1;Name=WP_135370605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741777.1;locus_tag=C9E93_RS10160;product=transglycosylase SLT domain-containing protein;protein_id=WP_135370605.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 12356 12538 . - . ID=gene-C9E93_RS10165;Name=C9E93_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10165;old_locus_tag=C9E93_10415 NZ_PYJV01000063.1 Protein Homology CDS 12356 12538 . - 0 ID=cds-WP_000228830.1;Parent=gene-C9E93_RS10165;Dbxref=GenBank:WP_000228830.1;Name=WP_000228830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228830.1;locus_tag=C9E93_RS10165;product=hypothetical protein;protein_id=WP_000228830.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 12580 12984 . - . ID=gene-C9E93_RS10170;Name=C9E93_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10170;old_locus_tag=C9E93_10420 NZ_PYJV01000063.1 Protein Homology CDS 12580 12984 . - 0 ID=cds-WP_000101348.1;Parent=gene-C9E93_RS10170;Dbxref=GenBank:WP_000101348.1;Name=WP_000101348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101348.1;locus_tag=C9E93_RS10170;product=hypothetical protein;protein_id=WP_000101348.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 12984 13430 . - . ID=gene-C9E93_RS10175;Name=C9E93_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10175;old_locus_tag=C9E93_10425 NZ_PYJV01000063.1 Protein Homology CDS 12984 13430 . - 0 ID=cds-WP_000016414.1;Parent=gene-C9E93_RS10175;Dbxref=GenBank:WP_000016414.1;Name=WP_000016414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016417.1;locus_tag=C9E93_RS10175;product=phage tail fiber protein;protein_id=WP_000016414.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 13431 14915 . - . ID=gene-C9E93_RS10180;Name=C9E93_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10180;old_locus_tag=C9E93_10430 NZ_PYJV01000063.1 Protein Homology CDS 13431 14915 . - 0 ID=cds-WP_023257599.1;Parent=gene-C9E93_RS10180;Dbxref=GenBank:WP_023257599.1;Name=WP_023257599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748488.1;locus_tag=C9E93_RS10180;product=DUF3383 domain-containing protein;protein_id=WP_023257599.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 14896 15441 . - . ID=gene-C9E93_RS10185;Name=C9E93_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10185;old_locus_tag=C9E93_10435 NZ_PYJV01000063.1 Protein Homology CDS 14896 15441 . - 0 ID=cds-WP_000094504.1;Parent=gene-C9E93_RS10185;Dbxref=GenBank:WP_000094504.1;Name=WP_000094504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525438.1;locus_tag=C9E93_RS10185;product=phage neck terminator protein;protein_id=WP_000094504.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 15426 15791 . - . ID=gene-C9E93_RS10190;Name=C9E93_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10190;old_locus_tag=C9E93_10440 NZ_PYJV01000063.1 Protein Homology CDS 15426 15791 . - 0 ID=cds-WP_047598851.1;Parent=gene-C9E93_RS10190;Dbxref=GenBank:WP_047598851.1;Name=WP_047598851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748490.1;locus_tag=C9E93_RS10190;product=hypothetical protein;protein_id=WP_047598851.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 15788 16372 . - . ID=gene-C9E93_RS10195;Name=C9E93_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10195;old_locus_tag=C9E93_10445 NZ_PYJV01000063.1 Protein Homology CDS 15788 16372 . - 0 ID=cds-WP_001748491.1;Parent=gene-C9E93_RS10195;Dbxref=GenBank:WP_001748491.1;Name=WP_001748491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247610.1;locus_tag=C9E93_RS10195;product=hypothetical protein;protein_id=WP_001748491.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 16366 16821 . - . ID=gene-C9E93_RS10200;Name=C9E93_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10200;old_locus_tag=C9E93_10450 NZ_PYJV01000063.1 Protein Homology CDS 16366 16821 . - 0 ID=cds-WP_001748492.1;Parent=gene-C9E93_RS10200;Dbxref=GenBank:WP_001748492.1;Name=WP_001748492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537613.1;locus_tag=C9E93_RS10200;product=DUF4054 domain-containing protein;protein_id=WP_001748492.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 16828 17175 . - . ID=gene-C9E93_RS10205;Name=C9E93_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10205;old_locus_tag=C9E93_10455 NZ_PYJV01000063.1 Protein Homology CDS 16828 17175 . - 0 ID=cds-WP_000829560.1;Parent=gene-C9E93_RS10205;Dbxref=GenBank:WP_000829560.1;Name=WP_000829560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829561.1;locus_tag=C9E93_RS10205;product=hypothetical protein;protein_id=WP_000829560.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 17179 18207 . - . ID=gene-C9E93_RS10210;Name=C9E93_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10210;old_locus_tag=C9E93_10460 NZ_PYJV01000063.1 Protein Homology CDS 17179 18207 . - 0 ID=cds-WP_135370606.1;Parent=gene-C9E93_RS10210;Dbxref=GenBank:WP_135370606.1;Name=WP_135370606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031907.1;locus_tag=C9E93_RS10210;product=DUF2184 domain-containing protein;protein_id=WP_135370606.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 18207 18689 . - . ID=gene-C9E93_RS10215;Name=C9E93_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10215;old_locus_tag=C9E93_10465 NZ_PYJV01000063.1 Protein Homology CDS 18207 18689 . - 0 ID=cds-WP_058111761.1;Parent=gene-C9E93_RS10215;Dbxref=GenBank:WP_058111761.1;Name=WP_058111761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091400.1;locus_tag=C9E93_RS10215;product=structural cement protein Gp24;protein_id=WP_058111761.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 18691 20037 . - . ID=gene-C9E93_RS10220;Name=C9E93_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10220;old_locus_tag=C9E93_10470 NZ_PYJV01000063.1 Protein Homology CDS 18691 20037 . - 0 ID=cds-WP_135370607.1;Parent=gene-C9E93_RS10220;Dbxref=GenBank:WP_135370607.1;Name=WP_135370607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748494.1;locus_tag=C9E93_RS10220;product=DUF2213 domain-containing protein;protein_id=WP_135370607.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 20034 20723 . - . ID=gene-C9E93_RS10225;Name=C9E93_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10225;old_locus_tag=C9E93_10475 NZ_PYJV01000063.1 Protein Homology CDS 20034 20723 . - 0 ID=cds-WP_057519928.1;Parent=gene-C9E93_RS10225;Dbxref=GenBank:WP_057519928.1;Name=WP_057519928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000552018.1;locus_tag=C9E93_RS10225;product=phage head morphogenesis protein;protein_id=WP_057519928.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 20764 22284 . - . ID=gene-C9E93_RS10230;Name=C9E93_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10230;old_locus_tag=C9E93_10480 NZ_PYJV01000063.1 Protein Homology CDS 20764 22284 . - 0 ID=cds-WP_135370608.1;Parent=gene-C9E93_RS10230;Dbxref=GenBank:WP_135370608.1;Name=WP_135370608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534366.1;locus_tag=C9E93_RS10230;product=DUF1073 domain-containing protein;protein_id=WP_135370608.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 22284 23903 . - . ID=gene-C9E93_RS10235;Name=C9E93_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10235;old_locus_tag=C9E93_10485 NZ_PYJV01000063.1 Protein Homology CDS 22284 23903 . - 0 ID=cds-WP_135370609.1;Parent=gene-C9E93_RS10235;Dbxref=GenBank:WP_135370609.1;Name=WP_135370609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130781.1;locus_tag=C9E93_RS10235;product=TerL protein;protein_id=WP_135370609.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 23906 24535 . - . ID=gene-C9E93_RS10240;Name=C9E93_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10240;old_locus_tag=C9E93_10490 NZ_PYJV01000063.1 Protein Homology CDS 23906 24535 . - 0 ID=cds-WP_023257591.1;Parent=gene-C9E93_RS10240;Dbxref=GenBank:WP_023257591.1;Name=WP_023257591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118130.1;locus_tag=C9E93_RS10240;product=hypothetical protein;protein_id=WP_023257591.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 24606 24839 . - . ID=gene-C9E93_RS10245;Name=C9E93_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10245;old_locus_tag=C9E93_10495 NZ_PYJV01000063.1 Protein Homology CDS 24606 24839 . - 0 ID=cds-WP_016716098.1;Parent=gene-C9E93_RS10245;Dbxref=GenBank:WP_016716098.1;Name=WP_016716098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705471.1;locus_tag=C9E93_RS10245;product=DUF826 domain-containing protein;protein_id=WP_016716098.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 25014 25478 . - . ID=gene-C9E93_RS10250;Name=C9E93_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10250;old_locus_tag=C9E93_10500 NZ_PYJV01000063.1 Protein Homology CDS 25014 25478 . - 0 ID=cds-WP_135370610.1;Parent=gene-C9E93_RS10250;Dbxref=GenBank:WP_135370610.1;Name=WP_135370610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672757.1;locus_tag=C9E93_RS10250;product=lysis protein;protein_id=WP_135370610.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 25579 26118 . - . ID=gene-C9E93_RS10255;Name=C9E93_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10255;old_locus_tag=C9E93_10505 NZ_PYJV01000063.1 Protein Homology CDS 25579 26118 . - 0 ID=cds-WP_001534313.1;Parent=gene-C9E93_RS10255;Dbxref=GenBank:WP_001534313.1;Name=WP_001534313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525444.1;locus_tag=C9E93_RS10255;product=lysozyme;protein_id=WP_001534313.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 26096 26398 . - . ID=gene-C9E93_RS10260;Name=C9E93_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10260;old_locus_tag=C9E93_10510 NZ_PYJV01000063.1 Protein Homology CDS 26096 26398 . - 0 ID=cds-WP_001525456.1;Parent=gene-C9E93_RS10260;Dbxref=GenBank:WP_001525456.1;Name=WP_001525456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674576.1;locus_tag=C9E93_RS10260;product=HP1 family phage holin;protein_id=WP_001525456.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 26548 26955 . - . ID=gene-C9E93_RS10265;Name=C9E93_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10265;old_locus_tag=C9E93_10515 NZ_PYJV01000063.1 Protein Homology CDS 26548 26955 . - 0 ID=cds-WP_001270289.1;Parent=gene-C9E93_RS10265;Dbxref=GenBank:WP_001270289.1;Name=WP_001270289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270289.1;locus_tag=C9E93_RS10265;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_001270289.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 27006 27182 . - . ID=gene-C9E93_RS10270;Name=C9E93_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10270;old_locus_tag=C9E93_10520 NZ_PYJV01000063.1 Protein Homology CDS 27006 27182 . - 0 ID=cds-WP_079982050.1;Parent=gene-C9E93_RS10270;Dbxref=GenBank:WP_079982050.1;Name=WP_079982050.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813792.1;locus_tag=C9E93_RS10270;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_079982050.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 27389 27925 . - . ID=gene-C9E93_RS10275;Name=C9E93_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10275;old_locus_tag=C9E93_10525 NZ_PYJV01000063.1 Protein Homology CDS 27389 27925 . - 0 ID=cds-WP_000640171.1;Parent=gene-C9E93_RS10275;Dbxref=GenBank:WP_000640171.1;Name=WP_000640171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640171.1;locus_tag=C9E93_RS10275;product=DUF1133 family protein;protein_id=WP_000640171.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 27922 28203 . - . ID=gene-C9E93_RS10280;Name=C9E93_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10280;old_locus_tag=C9E93_10530 NZ_PYJV01000063.1 Protein Homology CDS 27922 28203 . - 0 ID=cds-WP_000861020.1;Parent=gene-C9E93_RS10280;Dbxref=GenBank:WP_000861020.1;Name=WP_000861020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028995.1;locus_tag=C9E93_RS10280;product=DUF1364 family protein;protein_id=WP_000861020.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 28200 28394 . - . ID=gene-C9E93_RS23890;Name=C9E93_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23890;old_locus_tag=C9E93_10535 NZ_PYJV01000063.1 Protein Homology CDS 28200 28394 . - 0 ID=cds-WP_024136025.1;Parent=gene-C9E93_RS23890;Dbxref=GenBank:WP_024136025.1;Name=WP_024136025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784711.1;locus_tag=C9E93_RS23890;product=hypothetical protein;protein_id=WP_024136025.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 28391 28828 . - . ID=gene-C9E93_RS10290;Name=C9E93_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10290;old_locus_tag=C9E93_10540 NZ_PYJV01000063.1 Protein Homology CDS 28391 28828 . - 0 ID=cds-WP_000023105.1;Parent=gene-C9E93_RS10290;Dbxref=GenBank:WP_000023105.1;Name=WP_000023105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023105.1;locus_tag=C9E93_RS10290;product=recombination protein NinB;protein_id=WP_000023105.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 28858 28938 . - . ID=gene-C9E93_RS23895;Name=C9E93_RS23895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23895;partial=true;pseudo=true;start_range=.,28858 NZ_PYJV01000063.1 Protein Homology CDS 28858 28938 . - 0 ID=cds-C9E93_RS23895;Parent=gene-C9E93_RS23895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309983.1;locus_tag=C9E93_RS23895;partial=true;product=DUF1367 family protein;pseudo=true;start_range=.,28858;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 29405 29560 . - . ID=gene-C9E93_RS10295;Name=C9E93_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10295;old_locus_tag=C9E93_10545 NZ_PYJV01000063.1 Protein Homology CDS 29405 29560 . - 0 ID=cds-WP_001597144.1;Parent=gene-C9E93_RS10295;Dbxref=GenBank:WP_001597144.1;Name=WP_001597144.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=C9E93_RS10295;product=Hok/Gef family protein;protein_id=WP_001597144.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 29764 30036 . - . ID=gene-C9E93_RS10300;Name=C9E93_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10300;old_locus_tag=C9E93_10550 NZ_PYJV01000063.1 Protein Homology CDS 29764 30036 . - 0 ID=cds-WP_135370611.1;Parent=gene-C9E93_RS10300;Dbxref=GenBank:WP_135370611.1;Name=WP_135370611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687974.1;locus_tag=C9E93_RS10300;product=hypothetical protein;protein_id=WP_135370611.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 30033 30428 . - . ID=gene-C9E93_RS10305;Name=C9E93_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10305;old_locus_tag=C9E93_10555 NZ_PYJV01000063.1 Protein Homology CDS 30033 30428 . - 0 ID=cds-WP_135370612.1;Parent=gene-C9E93_RS10305;Dbxref=GenBank:WP_135370612.1;Name=WP_135370612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=C9E93_RS10305;product=DUF977 family protein;protein_id=WP_135370612.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 30446 31198 . - . ID=gene-C9E93_RS10310;Name=C9E93_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10310;old_locus_tag=C9E93_10560 NZ_PYJV01000063.1 Protein Homology CDS 30446 31198 . - 0 ID=cds-WP_082329189.1;Parent=gene-C9E93_RS10310;Dbxref=GenBank:WP_082329189.1;Name=WP_082329189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707241.4;locus_tag=C9E93_RS10310;product=ATP-binding protein;protein_id=WP_082329189.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 31624 32053 . - . ID=gene-C9E93_RS24185;Name=C9E93_RS24185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24185;partial=true;pseudo=true;start_range=.,31624 NZ_PYJV01000063.1 Protein Homology CDS 31624 32053 . - 0 ID=cds-C9E93_RS24185;Parent=gene-C9E93_RS24185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706798.1;locus_tag=C9E93_RS24185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,31624;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 32287 32673 . + . ID=gene-C9E93_RS24070;Name=C9E93_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24070;old_locus_tag=C9E93_10570 NZ_PYJV01000063.1 Protein Homology CDS 32287 32673 . + 0 ID=cds-WP_369597861.1;Parent=gene-C9E93_RS24070;Dbxref=GenBank:WP_369597861.1;Name=WP_369597861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033230.2;locus_tag=C9E93_RS24070;product=ECs1072 family phage-associated protein;protein_id=WP_369597861.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 32892 33389 . - . ID=gene-C9E93_RS10325;Name=C9E93_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10325;old_locus_tag=C9E93_10575 NZ_PYJV01000063.1 Protein Homology CDS 32892 33389 . - 0 ID=cds-WP_135370614.1;Parent=gene-C9E93_RS10325;Dbxref=GenBank:WP_135370614.1;Name=WP_135370614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=C9E93_RS10325;product=hypothetical protein;protein_id=WP_135370614.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 33376 33657 . - . ID=gene-C9E93_RS10330;Name=C9E93_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10330;old_locus_tag=C9E93_10580 NZ_PYJV01000063.1 Protein Homology CDS 33376 33657 . - 0 ID=cds-WP_080204561.1;Parent=gene-C9E93_RS10330;Dbxref=GenBank:WP_080204561.1;Name=WP_080204561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.6;locus_tag=C9E93_RS10330;product=transcriptional regulator;protein_id=WP_080204561.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 33756 34196 . + . ID=gene-C9E93_RS23905;Name=C9E93_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23905 NZ_PYJV01000063.1 Protein Homology CDS 33756 34196 . + 0 ID=cds-WP_080204562.1;Parent=gene-C9E93_RS23905;Dbxref=GenBank:WP_080204562.1;Name=WP_080204562.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=C9E93_RS23905;product=helix-turn-helix transcriptional regulator;protein_id=WP_080204562.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 34416 34571 . + . ID=gene-C9E93_RS10340;Name=C9E93_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10340;old_locus_tag=C9E93_10590 NZ_PYJV01000063.1 Protein Homology CDS 34416 34571 . + 0 ID=cds-WP_079961102.1;Parent=gene-C9E93_RS10340;Dbxref=GenBank:WP_079961102.1;Name=WP_079961102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674119.1;locus_tag=C9E93_RS10340;product=DUF1391 family protein;protein_id=WP_079961102.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 34783 35058 . + . ID=gene-C9E93_RS10345;Name=C9E93_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10345;old_locus_tag=C9E93_10595 NZ_PYJV01000063.1 Protein Homology CDS 34783 35058 . + 0 ID=cds-WP_000103933.1;Parent=gene-C9E93_RS10345;Dbxref=GenBank:WP_000103933.1;Name=WP_000103933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=C9E93_RS10345;product=hypothetical protein;protein_id=WP_000103933.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 35062 35268 . + . ID=gene-C9E93_RS10350;Name=C9E93_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10350;old_locus_tag=C9E93_10600 NZ_PYJV01000063.1 Protein Homology CDS 35062 35268 . + 0 ID=cds-WP_000682660.1;Parent=gene-C9E93_RS10350;Dbxref=GenBank:WP_000682660.1;Name=WP_000682660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=C9E93_RS10350;product=cell division inhibitor protein;protein_id=WP_000682660.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 35344 35667 . + . ID=gene-C9E93_RS10355;Name=C9E93_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10355;old_locus_tag=C9E93_10605 NZ_PYJV01000063.1 Protein Homology CDS 35344 35667 . + 0 ID=cds-WP_135370641.1;Parent=gene-C9E93_RS10355;Dbxref=GenBank:WP_135370641.1;Name=WP_135370641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=C9E93_RS10355;product=hypothetical protein;protein_id=WP_135370641.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 35808 38498 . + . ID=gene-C9E93_RS10360;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=C9E93_RS10360;old_locus_tag=C9E93_10610 NZ_PYJV01000063.1 Protein Homology CDS 35808 38498 . + 0 ID=cds-WP_135370162.1;Parent=gene-C9E93_RS10360;Dbxref=GenBank:WP_135370162.1;Name=WP_135370162.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=C9E93_RS10360;product=exodeoxyribonuclease VIII;protein_id=WP_135370162.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 38491 39321 . + . ID=gene-C9E93_RS10365;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=C9E93_RS10365;old_locus_tag=C9E93_10615 NZ_PYJV01000063.1 Protein Homology CDS 38491 39321 . + 0 ID=cds-WP_135370161.1;Parent=gene-C9E93_RS10365;Dbxref=GenBank:WP_135370161.1;Name=WP_135370161.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=C9E93_RS10365;product=recombination protein RecT;protein_id=WP_135370161.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 39357 39677 . + . ID=gene-C9E93_RS10370;Name=C9E93_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10370;old_locus_tag=C9E93_10620 NZ_PYJV01000063.1 Protein Homology CDS 39357 39677 . + 0 ID=cds-WP_135370160.1;Parent=gene-C9E93_RS10370;Dbxref=GenBank:WP_135370160.1;Name=WP_135370160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033921.1;locus_tag=C9E93_RS10370;product=hypothetical protein;protein_id=WP_135370160.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 39670 40002 . + . ID=gene-C9E93_RS10375;Name=C9E93_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10375;old_locus_tag=C9E93_10625 NZ_PYJV01000063.1 Protein Homology CDS 39670 40002 . + 0 ID=cds-WP_135370159.1;Parent=gene-C9E93_RS10375;Dbxref=GenBank:WP_135370159.1;Name=WP_135370159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066251.1;locus_tag=C9E93_RS10375;product=hypothetical protein;protein_id=WP_135370159.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 39999 40625 . + . ID=gene-C9E93_RS23910;Name=C9E93_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23910 NZ_PYJV01000063.1 Protein Homology CDS 39999 40625 . + 0 ID=cds-WP_223614441.1;Parent=gene-C9E93_RS23910;Dbxref=GenBank:WP_223614441.1;Name=WP_223614441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069465.1;locus_tag=C9E93_RS23910;product=Eaa protein;protein_id=WP_223614441.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 40613 40792 . + . ID=gene-C9E93_RS10385;Name=C9E93_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10385;old_locus_tag=C9E93_10635 NZ_PYJV01000063.1 Protein Homology CDS 40613 40792 . + 0 ID=cds-WP_000276802.1;Parent=gene-C9E93_RS10385;Dbxref=GenBank:WP_000276802.1;Name=WP_000276802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276802.1;locus_tag=C9E93_RS10385;product=DUF1187 family protein;protein_id=WP_000276802.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 40886 41143 . + . ID=gene-C9E93_RS10390;Name=C9E93_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10390;old_locus_tag=C9E93_10640 NZ_PYJV01000063.1 Protein Homology CDS 40886 41143 . + 0 ID=cds-WP_023892805.1;Parent=gene-C9E93_RS10390;Dbxref=GenBank:WP_023892805.1;Name=WP_023892805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524382.1;locus_tag=C9E93_RS10390;product=hypothetical protein;protein_id=WP_023892805.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 41140 43221 . + . ID=gene-C9E93_RS10395;Name=C9E93_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10395;old_locus_tag=C9E93_10645 NZ_PYJV01000063.1 Protein Homology CDS 41140 43221 . + 0 ID=cds-WP_023892804.1;Parent=gene-C9E93_RS10395;Dbxref=GenBank:WP_023892804.1;Name=WP_023892804.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524362.1;locus_tag=C9E93_RS10395;product=DNA cytosine methyltransferase;protein_id=WP_023892804.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 43218 43634 . + . ID=gene-C9E93_RS23720;Name=C9E93_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23720 NZ_PYJV01000063.1 Protein Homology CDS 43218 43634 . + 0 ID=cds-WP_022630509.1;Parent=gene-C9E93_RS23720;Dbxref=GenBank:WP_022630509.1;Name=WP_022630509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743303.1;locus_tag=C9E93_RS23720;product=hypothetical protein;protein_id=WP_022630509.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 43707 43979 . + . ID=gene-C9E93_RS10405;Name=C9E93_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10405;old_locus_tag=C9E93_10655 NZ_PYJV01000063.1 Protein Homology CDS 43707 43979 . + 0 ID=cds-WP_038390080.1;Parent=gene-C9E93_RS10405;Dbxref=GenBank:WP_038390080.1;Name=WP_038390080.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=C9E93_RS10405;product=excisionase;protein_id=WP_038390080.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 43960 45039 . + . ID=gene-C9E93_RS10410;Name=C9E93_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10410;old_locus_tag=C9E93_10660 NZ_PYJV01000063.1 Protein Homology CDS 43960 45039 . + 0 ID=cds-WP_080160492.1;Parent=gene-C9E93_RS10410;Dbxref=GenBank:WP_080160492.1;Name=WP_080160492.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=C9E93_RS10410;product=tyrosine-type recombinase/integrase;protein_id=WP_080160492.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 45422 45775 . - . ID=gene-C9E93_RS10420;Name=C9E93_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10420;old_locus_tag=C9E93_10675 NZ_PYJV01000063.1 Protein Homology CDS 45422 45775 . - 0 ID=cds-WP_000722368.1;Parent=gene-C9E93_RS10420;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9E93_RS10420;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 45792 46667 . - . ID=gene-C9E93_RS10425;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9E93_RS10425;old_locus_tag=C9E93_10680 NZ_PYJV01000063.1 Protein Homology CDS 45792 46667 . - 0 ID=cds-WP_077908185.1;Parent=gene-C9E93_RS10425;Dbxref=GenBank:WP_077908185.1;Name=WP_077908185.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9E93_RS10425;product=copper homeostasis membrane protein CopD;protein_id=WP_077908185.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 46668 47042 . - . ID=gene-C9E93_RS10430;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9E93_RS10430;old_locus_tag=C9E93_10685 NZ_PYJV01000063.1 Protein Homology CDS 46668 47042 . - 0 ID=cds-WP_000168395.1;Parent=gene-C9E93_RS10430;Dbxref=GenBank:WP_000168395.1;Name=WP_000168395.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9E93_RS10430;product=CopC domain-containing protein YobA;protein_id=WP_000168395.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 47180 47410 . + . ID=gene-C9E93_RS10435;Name=C9E93_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10435;old_locus_tag=C9E93_10690 NZ_PYJV01000063.1 Protein Homology CDS 47180 47410 . + 0 ID=cds-WP_000856224.1;Parent=gene-C9E93_RS10435;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9E93_RS10435;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 47518 48174 . + . ID=gene-C9E93_RS10440;Name=C9E93_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10440;old_locus_tag=C9E93_10695 NZ_PYJV01000063.1 Protein Homology CDS 47518 48174 . + 0 ID=cds-WP_000100249.1;Parent=gene-C9E93_RS10440;Dbxref=GenBank:WP_000100249.1;Name=WP_000100249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9E93_RS10440;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100249.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 48198 48896 . + . ID=gene-C9E93_RS10445;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9E93_RS10445;old_locus_tag=C9E93_10700 NZ_PYJV01000063.1 Protein Homology CDS 48198 48896 . + 0 ID=cds-WP_079973233.1;Parent=gene-C9E93_RS10445;Dbxref=GenBank:WP_079973233.1;Name=WP_079973233.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9E93_RS10445;product=exodeoxyribonuclease X;protein_id=WP_079973233.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 48933 50984 . - . ID=gene-C9E93_RS10450;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9E93_RS10450;old_locus_tag=C9E93_10705 NZ_PYJV01000063.1 Protein Homology CDS 48933 50984 . - 0 ID=cds-WP_000936999.1;Parent=gene-C9E93_RS10450;Dbxref=GenBank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9E93_RS10450;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 51197 51856 . - . ID=gene-C9E93_RS10455;Name=C9E93_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10455;old_locus_tag=C9E93_10710 NZ_PYJV01000063.1 Protein Homology CDS 51197 51856 . - 0 ID=cds-WP_000024706.1;Parent=gene-C9E93_RS10455;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9E93_RS10455;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 51950 52303 . - . ID=gene-C9E93_RS10460;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=C9E93_RS10460;old_locus_tag=C9E93_10715 NZ_PYJV01000063.1 Protein Homology CDS 51950 52303 . - 0 ID=cds-WP_001042123.1;Parent=gene-C9E93_RS10460;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9E93_RS10460;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 52371 52661 . - . ID=gene-C9E93_RS10465;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9E93_RS10465;old_locus_tag=C9E93_10720 NZ_PYJV01000063.1 Protein Homology CDS 52371 52661 . - 0 ID=cds-WP_000257723.1;Parent=gene-C9E93_RS10465;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9E93_RS10465;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 52792 53970 . + . ID=gene-C9E93_RS10470;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9E93_RS10470;old_locus_tag=C9E93_10725 NZ_PYJV01000063.1 Protein Homology CDS 52792 53970 . + 0 ID=cds-WP_000173429.1;Parent=gene-C9E93_RS10470;Dbxref=GenBank:WP_000173429.1;Name=WP_000173429.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9E93_RS10470;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173429.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 54070 54711 . - . ID=gene-C9E93_RS10475;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=C9E93_RS10475;old_locus_tag=C9E93_10730 NZ_PYJV01000063.1 Protein Homology CDS 54070 54711 . - 0 ID=cds-WP_000800497.1;Parent=gene-C9E93_RS10475;Dbxref=GenBank:WP_000800497.1;Name=WP_000800497.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9E93_RS10475;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800497.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 54749 56560 . - . ID=gene-C9E93_RS10480;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=C9E93_RS10480;old_locus_tag=C9E93_10735 NZ_PYJV01000063.1 Protein Homology CDS 54749 56560 . - 0 ID=cds-WP_135370158.1;Parent=gene-C9E93_RS10480;Dbxref=GenBank:WP_135370158.1;Name=WP_135370158.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9E93_RS10480;product=phosphogluconate dehydratase;protein_id=WP_135370158.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 56795 58270 . - . ID=gene-C9E93_RS10485;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9E93_RS10485;old_locus_tag=C9E93_10740 NZ_PYJV01000063.1 Protein Homology CDS 56795 58270 . - 0 ID=cds-WP_000301711.1;Parent=gene-C9E93_RS10485;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9E93_RS10485;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 58612 59481 . + . ID=gene-C9E93_RS10495;Name=C9E93_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10495;old_locus_tag=C9E93_10750 NZ_PYJV01000063.1 Protein Homology CDS 58612 59481 . + 0 ID=cds-WP_001056719.1;Parent=gene-C9E93_RS10495;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9E93_RS10495;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 59605 61047 . + . ID=gene-C9E93_RS10500;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9E93_RS10500;old_locus_tag=C9E93_10755 NZ_PYJV01000063.1 Protein Homology CDS 59605 61047 . + 0 ID=cds-WP_000091156.1;Parent=gene-C9E93_RS10500;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9E93_RS10500;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 61120 62091 . - . ID=gene-C9E93_RS10505;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9E93_RS10505;old_locus_tag=C9E93_10760 NZ_PYJV01000063.1 Protein Homology CDS 61120 62091 . - 0 ID=cds-WP_000448401.1;Parent=gene-C9E93_RS10505;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9E93_RS10505;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 62208 63527 . - . ID=gene-C9E93_RS10510;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9E93_RS10510;old_locus_tag=C9E93_10770 NZ_PYJV01000063.1 Protein Homology CDS 62208 63527 . - 0 ID=cds-WP_001184028.1;Parent=gene-C9E93_RS10510;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9E93_RS10510;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 63543 64487 . - . ID=gene-C9E93_RS10515;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9E93_RS10515;old_locus_tag=C9E93_10775 NZ_PYJV01000063.1 Protein Homology CDS 63543 64487 . - 0 ID=cds-WP_000939597.1;Parent=gene-C9E93_RS10515;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9E93_RS10515;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 64566 65321 . + . ID=gene-C9E93_RS10520;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9E93_RS10520;old_locus_tag=C9E93_10780 NZ_PYJV01000063.1 Protein Homology CDS 64566 65321 . + 0 ID=cds-WP_000203023.1;Parent=gene-C9E93_RS10520;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9E93_RS10520;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 65318 66103 . + . ID=gene-C9E93_RS10525;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9E93_RS10525;old_locus_tag=C9E93_10785 NZ_PYJV01000063.1 Protein Homology CDS 65318 66103 . + 0 ID=cds-WP_000571508.1;Parent=gene-C9E93_RS10525;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9E93_RS10525;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 66182 67192 . - . ID=gene-C9E93_RS10530;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=C9E93_RS10530;old_locus_tag=C9E93_10790 NZ_PYJV01000063.1 Protein Homology CDS 66182 67192 . - 0 ID=cds-WP_000568508.1;Parent=gene-C9E93_RS10530;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9E93_RS10530;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 67201 67812 . - . ID=gene-C9E93_RS10535;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9E93_RS10535;old_locus_tag=C9E93_10795 NZ_PYJV01000063.1 Protein Homology CDS 67201 67812 . - 0 ID=cds-WP_000580335.1;Parent=gene-C9E93_RS10535;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9E93_RS10535;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 68232 69128 . + . ID=gene-C9E93_RS10540;Name=C9E93_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10540;old_locus_tag=C9E93_10800 NZ_PYJV01000063.1 Protein Homology CDS 68232 69128 . + 0 ID=cds-WP_010989032.1;Parent=gene-C9E93_RS10540;Dbxref=GenBank:WP_010989032.1;Name=WP_010989032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460853.1;locus_tag=C9E93_RS10540;product=DUF4034 domain-containing protein;protein_id=WP_010989032.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 69755 70351 . + . ID=gene-C9E93_RS10550;Name=C9E93_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10550;old_locus_tag=C9E93_10810 NZ_PYJV01000063.1 Protein Homology CDS 69755 70351 . + 0 ID=cds-WP_079973237.1;Parent=gene-C9E93_RS10550;Dbxref=GenBank:WP_079973237.1;Name=WP_079973237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=C9E93_RS10550;product=YebB family permuted papain-like enzyme;protein_id=WP_079973237.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 70451 71947 . - . ID=gene-C9E93_RS10555;Name=C9E93_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10555;old_locus_tag=C9E93_10815 NZ_PYJV01000063.1 Protein Homology CDS 70451 71947 . - 0 ID=cds-WP_135370295.1;Parent=gene-C9E93_RS10555;Dbxref=GenBank:WP_135370295.1;Name=WP_135370295.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9E93_RS10555;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_135370295.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 71978 72499 . - . ID=gene-C9E93_RS10560;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9E93_RS10560;old_locus_tag=C9E93_10820 NZ_PYJV01000063.1 Protein Homology CDS 71978 72499 . - 0 ID=cds-WP_000022510.1;Parent=gene-C9E93_RS10560;Dbxref=GenBank:WP_000022510.1;Name=WP_000022510.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9E93_RS10560;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022510.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 72536 73276 . - . ID=gene-C9E93_RS10565;Name=C9E93_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10565;old_locus_tag=C9E93_10825 NZ_PYJV01000063.1 Protein Homology CDS 72536 73276 . - 0 ID=cds-WP_000907242.1;Parent=gene-C9E93_RS10565;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9E93_RS10565;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 73306 73758 . - . ID=gene-C9E93_RS10570;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9E93_RS10570;old_locus_tag=C9E93_10830 NZ_PYJV01000063.1 Protein Homology CDS 73306 73758 . - 0 ID=cds-WP_000653693.1;Parent=gene-C9E93_RS10570;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9E93_RS10570;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 73852 75624 . - . ID=gene-C9E93_RS10575;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9E93_RS10575;old_locus_tag=C9E93_10835 NZ_PYJV01000063.1 Protein Homology CDS 73852 75624 . - 0 ID=cds-WP_001258633.1;Parent=gene-C9E93_RS10575;Dbxref=GenBank:WP_001258633.1;Name=WP_001258633.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9E93_RS10575;product=aspartate--tRNA ligase;protein_id=WP_001258633.1;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 75949 76515 . + . ID=gene-C9E93_RS10580;Name=C9E93_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10580;old_locus_tag=C9E93_10840 NZ_PYJV01000063.1 Protein Homology CDS 75949 76515 . + 0 ID=cds-WP_000916146.1;Parent=gene-C9E93_RS10580;Dbxref=GenBank:WP_000916146.1;Name=WP_000916146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9E93_RS10580;product=hydrolase;protein_id=WP_000916146.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 76512 76607 . + . ID=gene-C9E93_RS23915;Name=C9E93_RS23915;end_range=76607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23915;partial=true;pseudo=true NZ_PYJV01000063.1 Protein Homology CDS 76512 76607 . + 0 ID=cds-C9E93_RS23915;Parent=gene-C9E93_RS23915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=76607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E93_RS23915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 76838 77509 . + . ID=gene-C9E93_RS10590;Name=C9E93_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10590;old_locus_tag=C9E93_10850 NZ_PYJV01000063.1 Protein Homology CDS 76838 77509 . + 0 ID=cds-WP_135370294.1;Parent=gene-C9E93_RS10590;Dbxref=GenBank:WP_135370294.1;Name=WP_135370294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=C9E93_RS10590;product=SOS response-associated peptidase;protein_id=WP_135370294.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 77502 77729 . - . ID=gene-C9E93_RS24075;Name=C9E93_RS24075;end_range=77729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24075;old_locus_tag=C9E93_10855;partial=true;pseudo=true NZ_PYJV01000063.1 Protein Homology CDS 77502 77729 . - 0 ID=cds-C9E93_RS24075;Parent=gene-C9E93_RS24075;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807729.1;locus_tag=C9E93_RS24075;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 77829 79940 . - . ID=gene-C9E93_RS10600;Name=sspH1;gbkey=Gene;gene=sspH1;gene_biotype=protein_coding;locus_tag=C9E93_RS10600;old_locus_tag=C9E93_10865 NZ_PYJV01000063.1 Protein Homology CDS 77829 79940 . - 0 ID=cds-WP_135370293.1;Parent=gene-C9E93_RS10600;Dbxref=GenBank:WP_135370293.1;Name=WP_135370293.1;gbkey=CDS;gene=sspH1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=C9E93_RS10600;product=type III secretion system effector E3 ubiquitin transferase SspH1;protein_id=WP_135370293.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 80112 81152 . - . ID=gene-C9E93_RS10605;Name=C9E93_RS10605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS10605;old_locus_tag=C9E93_10870;pseudo=true NZ_PYJV01000063.1 Protein Homology CDS 80112 81152 . - 0 ID=cds-C9E93_RS10605;Parent=gene-C9E93_RS10605;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9E93_RS10605;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_PYJV01000063.1 RefSeq gene 81485 81610 . - . ID=gene-C9E93_RS23930;Name=C9E93_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23930;old_locus_tag=C9E93_10875 NZ_PYJV01000063.1 Protein Homology CDS 81485 81610 . - 0 ID=cds-WP_000457876.1;Parent=gene-C9E93_RS23930;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9E93_RS23930;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_PYJV01000063.1 RefSeq pseudogene 81601 81803 . + . ID=gene-C9E93_RS23935;Name=C9E93_RS23935;end_range=81803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23935;partial=true;pseudo=true;start_range=.,81601 NZ_PYJV01000063.1 Protein Homology CDS 81601 81803 . + 0 ID=cds-C9E93_RS23935;Parent=gene-C9E93_RS23935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=81803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E93_RS23935;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,81601;transl_table=11 ##sequence-region NZ_PYJV01000034.1 1 79663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000034.1 RefSeq region 1 79663 . + . ID=NZ_PYJV01000034.1:1..79663;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000034.1 RefSeq pseudogene 1 310 . - . ID=gene-C9E93_RS05045;Name=C9E93_RS05045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS05045;old_locus_tag=C9E93_05220;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000034.1 Protein Homology CDS 1 310 . - 0 ID=cds-C9E93_RS05045;Parent=gene-C9E93_RS05045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661871.1;locus_tag=C9E93_RS05045;partial=true;product=DUF2326 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 301 540 . - . ID=gene-C9E93_RS24060;Name=C9E93_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24060;old_locus_tag=C9E93_05225 NZ_PYJV01000034.1 Protein Homology CDS 301 540 . - 0 ID=cds-WP_353622598.1;Parent=gene-C9E93_RS24060;Dbxref=GenBank:WP_353622598.1;Name=WP_353622598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042477.4;locus_tag=C9E93_RS24060;product=ABC-three component system middle component 6;protein_id=WP_353622598.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 537 1136 . - . ID=gene-C9E93_RS05050;Name=C9E93_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05050;old_locus_tag=C9E93_05230 NZ_PYJV01000034.1 GeneMarkS-2+ CDS 537 1136 . - 0 ID=cds-WP_135400591.1;Parent=gene-C9E93_RS05050;Dbxref=GenBank:WP_135400591.1;Name=WP_135400591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS05050;product=hypothetical protein;protein_id=WP_135400591.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 1697 2926 . - . ID=gene-C9E93_RS05055;Name=C9E93_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05055;old_locus_tag=C9E93_05235 NZ_PYJV01000034.1 Protein Homology CDS 1697 2926 . - 0 ID=cds-WP_135370057.1;Parent=gene-C9E93_RS05055;Dbxref=GenBank:WP_135370057.1;Name=WP_135370057.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF007246.0;locus_tag=C9E93_RS05055;product=integrase domain-containing protein;protein_id=WP_135370057.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 3255 4280 . - . ID=gene-C9E93_RS05060;Name=C9E93_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05060;old_locus_tag=C9E93_05240 NZ_PYJV01000034.1 Protein Homology CDS 3255 4280 . - 0 ID=cds-WP_001585446.1;Parent=gene-C9E93_RS05060;Dbxref=GenBank:WP_001585446.1;Name=WP_001585446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=C9E93_RS05060;product=site-specific integrase;protein_id=WP_001585446.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 4284 4916 . - . ID=gene-C9E93_RS05065;Name=C9E93_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05065;old_locus_tag=C9E93_05245 NZ_PYJV01000034.1 Protein Homology CDS 4284 4916 . - 0 ID=cds-WP_135370056.1;Parent=gene-C9E93_RS05065;Dbxref=GenBank:WP_135370056.1;Name=WP_135370056.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747373.1;locus_tag=C9E93_RS05065;product=phage repressor protein CI;protein_id=WP_135370056.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 5036 5284 . + . ID=gene-C9E93_RS05070;Name=C9E93_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05070;old_locus_tag=C9E93_05250 NZ_PYJV01000034.1 Protein Homology CDS 5036 5284 . + 0 ID=cds-WP_023225961.1;Parent=gene-C9E93_RS05070;Dbxref=GenBank:WP_023225961.1;Name=WP_023225961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817401.1;locus_tag=C9E93_RS05070;product=hypothetical protein;protein_id=WP_023225961.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 5317 5826 . + . ID=gene-C9E93_RS05075;Name=C9E93_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05075;old_locus_tag=C9E93_05255 NZ_PYJV01000034.1 Protein Homology CDS 5317 5826 . + 0 ID=cds-WP_001749756.1;Parent=gene-C9E93_RS05075;Dbxref=GenBank:WP_001749756.1;Name=WP_001749756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=C9E93_RS05075;product=phage regulatory CII family protein;protein_id=WP_001749756.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 5834 6067 . + . ID=gene-C9E93_RS05080;Name=C9E93_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05080;old_locus_tag=C9E93_05260 NZ_PYJV01000034.1 Protein Homology CDS 5834 6067 . + 0 ID=cds-WP_000957775.1;Parent=gene-C9E93_RS05080;Dbxref=GenBank:WP_000957775.1;Name=WP_000957775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=C9E93_RS05080;product=phage filamentation protein Fil family protein;protein_id=WP_000957775.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 6015 6473 . - . ID=gene-C9E93_RS05085;Name=C9E93_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05085;old_locus_tag=C9E93_05265 NZ_PYJV01000034.1 Protein Homology CDS 6015 6473 . - 0 ID=cds-WP_000166366.1;Parent=gene-C9E93_RS05085;Dbxref=GenBank:WP_000166366.1;Name=WP_000166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=C9E93_RS05085;product=hypothetical protein;protein_id=WP_000166366.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 6693 7034 . + . ID=gene-C9E93_RS05090;Name=C9E93_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05090;old_locus_tag=C9E93_05270 NZ_PYJV01000034.1 Protein Homology CDS 6693 7034 . + 0 ID=cds-WP_000963195.1;Parent=gene-C9E93_RS05090;Dbxref=GenBank:WP_000963195.1;Name=WP_000963195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=C9E93_RS05090;product=DUF5347 domain-containing protein;protein_id=WP_000963195.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 7102 7335 . + . ID=gene-C9E93_RS05095;Name=C9E93_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05095;old_locus_tag=C9E93_05275 NZ_PYJV01000034.1 Protein Homology CDS 7102 7335 . + 0 ID=cds-WP_001244234.1;Parent=gene-C9E93_RS05095;Dbxref=GenBank:WP_001244234.1;Name=WP_001244234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=C9E93_RS05095;product=DUF2732 domain-containing protein;protein_id=WP_001244234.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 7335 7562 . + . ID=gene-C9E93_RS05100;Name=C9E93_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05100;old_locus_tag=C9E93_05280 NZ_PYJV01000034.1 Protein Homology CDS 7335 7562 . + 0 ID=cds-WP_000785509.1;Parent=gene-C9E93_RS05100;Dbxref=GenBank:WP_000785509.1;Name=WP_000785509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=C9E93_RS05100;product=TraR/DksA family transcriptional regulator;protein_id=WP_000785509.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 7559 8416 . + . ID=gene-C9E93_RS05105;Name=C9E93_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05105;old_locus_tag=C9E93_05285 NZ_PYJV01000034.1 Protein Homology CDS 7559 8416 . + 0 ID=cds-WP_001749757.1;Parent=gene-C9E93_RS05105;Dbxref=GenBank:WP_001749757.1;Name=WP_001749757.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461657.1;locus_tag=C9E93_RS05105;product=DNA adenine methylase;protein_id=WP_001749757.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 8407 10815 . + . ID=gene-C9E93_RS05110;Name=C9E93_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05110;old_locus_tag=C9E93_05290 NZ_PYJV01000034.1 Protein Homology CDS 8407 10815 . + 0 ID=cds-WP_135370055.1;Parent=gene-C9E93_RS05110;Dbxref=GenBank:WP_135370055.1;Name=WP_135370055.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461656.1;locus_tag=C9E93_RS05110;product=replication endonuclease;protein_id=WP_135370055.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 10835 11062 . - . ID=gene-C9E93_RS05115;Name=C9E93_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05115;old_locus_tag=C9E93_05295 NZ_PYJV01000034.1 GeneMarkS-2+ CDS 10835 11062 . - 0 ID=cds-WP_001749759.1;Parent=gene-C9E93_RS05115;Dbxref=GenBank:WP_001749759.1;Name=WP_001749759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS05115;product=hypothetical protein;protein_id=WP_001749759.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 11200 11388 . + . ID=gene-C9E93_RS05120;Name=C9E93_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05120;old_locus_tag=C9E93_05300 NZ_PYJV01000034.1 Protein Homology CDS 11200 11388 . + 0 ID=cds-WP_001749760.1;Parent=gene-C9E93_RS05120;Dbxref=GenBank:WP_001749760.1;Name=WP_001749760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226015.1;locus_tag=C9E93_RS05120;product=hypothetical protein;protein_id=WP_001749760.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 11724 12722 . + . ID=gene-C9E93_RS05125;Name=C9E93_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05125;old_locus_tag=C9E93_05305 NZ_PYJV01000034.1 Protein Homology CDS 11724 12722 . + 0 ID=cds-WP_242411811.1;Parent=gene-C9E93_RS05125;Dbxref=GenBank:WP_242411811.1;Name=WP_242411811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564476.1;locus_tag=C9E93_RS05125;product=hypothetical protein;protein_id=WP_242411811.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 12779 13738 . - . ID=gene-C9E93_RS05130;Name=C9E93_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05130;old_locus_tag=C9E93_05310 NZ_PYJV01000034.1 Protein Homology CDS 12779 13738 . - 0 ID=cds-WP_023171081.1;Parent=gene-C9E93_RS05130;Dbxref=GenBank:WP_023171081.1;Name=WP_023171081.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078491.1;locus_tag=C9E93_RS05130;product=HNH endonuclease;protein_id=WP_023171081.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 13810 14844 . - . ID=gene-C9E93_RS05135;Name=C9E93_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05135;old_locus_tag=C9E93_05315 NZ_PYJV01000034.1 Protein Homology CDS 13810 14844 . - 0 ID=cds-WP_021293761.1;Parent=gene-C9E93_RS05135;Dbxref=GenBank:WP_021293761.1;Name=WP_021293761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528593.1;locus_tag=C9E93_RS05135;product=phage portal protein;protein_id=WP_021293761.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 14844 16610 . - . ID=gene-C9E93_RS05140;Name=C9E93_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05140;old_locus_tag=C9E93_05320 NZ_PYJV01000034.1 Protein Homology CDS 14844 16610 . - 0 ID=cds-WP_058144952.1;Parent=gene-C9E93_RS05140;Dbxref=GenBank:WP_058144952.1;Name=WP_058144952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=C9E93_RS05140;product=terminase ATPase subunit family protein;protein_id=WP_058144952.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 16752 17585 . + . ID=gene-C9E93_RS05145;Name=C9E93_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05145;old_locus_tag=C9E93_05325 NZ_PYJV01000034.1 Protein Homology CDS 16752 17585 . + 0 ID=cds-WP_023171079.1;Parent=gene-C9E93_RS05145;Dbxref=GenBank:WP_023171079.1;Name=WP_023171079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=C9E93_RS05145;product=GPO family capsid scaffolding protein;protein_id=WP_023171079.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 17602 18666 . + . ID=gene-C9E93_RS05150;Name=C9E93_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05150;old_locus_tag=C9E93_05330 NZ_PYJV01000034.1 Protein Homology CDS 17602 18666 . + 0 ID=cds-WP_000730757.1;Parent=gene-C9E93_RS05150;Dbxref=GenBank:WP_000730757.1;Name=WP_000730757.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714844.1;locus_tag=C9E93_RS05150;product=phage major capsid protein%2C P2 family;protein_id=WP_000730757.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 18670 19320 . + . ID=gene-C9E93_RS05155;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=C9E93_RS05155;old_locus_tag=C9E93_05335 NZ_PYJV01000034.1 Protein Homology CDS 18670 19320 . + 0 ID=cds-WP_000059172.1;Parent=gene-C9E93_RS05155;Dbxref=GenBank:WP_000059172.1;Name=WP_000059172.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=C9E93_RS05155;product=phage terminase small subunit;protein_id=WP_000059172.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 19414 19878 . + . ID=gene-C9E93_RS05160;Name=C9E93_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05160;old_locus_tag=C9E93_05340 NZ_PYJV01000034.1 Protein Homology CDS 19414 19878 . + 0 ID=cds-WP_045901531.1;Parent=gene-C9E93_RS05160;Dbxref=GenBank:WP_045901531.1;Name=WP_045901531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=C9E93_RS05160;product=head completion/stabilization protein;protein_id=WP_045901531.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 19878 20081 . + . ID=gene-C9E93_RS05165;Name=C9E93_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05165;old_locus_tag=C9E93_05345 NZ_PYJV01000034.1 Protein Homology CDS 19878 20081 . + 0 ID=cds-WP_000868184.1;Parent=gene-C9E93_RS05165;Dbxref=GenBank:WP_000868184.1;Name=WP_000868184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=C9E93_RS05165;product=tail protein X;protein_id=WP_000868184.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 20085 20300 . + . ID=gene-C9E93_RS05170;Name=C9E93_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05170;old_locus_tag=C9E93_05350 NZ_PYJV01000034.1 Protein Homology CDS 20085 20300 . + 0 ID=cds-WP_000171565.1;Parent=gene-C9E93_RS05170;Dbxref=GenBank:WP_000171565.1;Name=WP_000171565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=C9E93_RS05170;product=HP1 family phage holin;protein_id=WP_000171565.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 20281 20790 . + . ID=gene-C9E93_RS05175;Name=C9E93_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05175;old_locus_tag=C9E93_05355 NZ_PYJV01000034.1 Protein Homology CDS 20281 20790 . + 0 ID=cds-WP_079907493.1;Parent=gene-C9E93_RS05175;Dbxref=GenBank:WP_079907493.1;Name=WP_079907493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077486.1;locus_tag=C9E93_RS05175;product=lysozyme;protein_id=WP_079907493.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 20795 21172 . + . ID=gene-C9E93_RS05180;Name=C9E93_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05180;old_locus_tag=C9E93_05360 NZ_PYJV01000034.1 Protein Homology CDS 20795 21172 . + 0 ID=cds-WP_000731036.1;Parent=gene-C9E93_RS05180;Dbxref=GenBank:WP_000731036.1;Name=WP_000731036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079800986.1;locus_tag=C9E93_RS05180;product=DNZ54_00345 family protein;protein_id=WP_000731036.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 21169 21597 . + . ID=gene-C9E93_RS23855;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=C9E93_RS23855;old_locus_tag=C9E93_05365 NZ_PYJV01000034.1 Protein Homology CDS 21169 21597 . + 0 ID=cds-WP_165886420.1;Parent=gene-C9E93_RS23855;Dbxref=GenBank:WP_165886420.1;Name=WP_165886420.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=C9E93_RS23855;product=Rz-like lysis system protein LysB;protein_id=WP_165886420.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 21482 21730 . + . ID=gene-C9E93_RS23670;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E93_RS23670;old_locus_tag=C9E93_05370 NZ_PYJV01000034.1 Protein Homology CDS 21482 21730 . + 0 ID=cds-WP_223149275.1;Parent=gene-C9E93_RS23670;Dbxref=GenBank:WP_223149275.1;Name=WP_223149275.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=C9E93_RS23670;product=Rz1-like lysis system protein LysC;protein_id=WP_223149275.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 21693 22124 . + . ID=gene-C9E93_RS05195;Name=C9E93_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05195;old_locus_tag=C9E93_05375 NZ_PYJV01000034.1 Protein Homology CDS 21693 22124 . + 0 ID=cds-WP_135400592.1;Parent=gene-C9E93_RS05195;Dbxref=GenBank:WP_135400592.1;Name=WP_135400592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=C9E93_RS05195;product=phage tail protein;protein_id=WP_135400592.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 22117 22566 . + . ID=gene-C9E93_RS05200;Name=C9E93_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05200;old_locus_tag=C9E93_05380 NZ_PYJV01000034.1 Protein Homology CDS 22117 22566 . + 0 ID=cds-WP_135400593.1;Parent=gene-C9E93_RS05200;Dbxref=GenBank:WP_135400593.1;Name=WP_135400593.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554841.1;locus_tag=C9E93_RS05200;product=phage virion morphogenesis protein;protein_id=WP_135400593.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 22569 23261 . - . ID=gene-C9E93_RS05205;Name=C9E93_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05205;old_locus_tag=C9E93_05385 NZ_PYJV01000034.1 GeneMarkS-2+ CDS 22569 23261 . - 0 ID=cds-WP_135400594.1;Parent=gene-C9E93_RS05205;Dbxref=GenBank:WP_135400594.1;Name=WP_135400594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS05205;product=hypothetical protein;protein_id=WP_135400594.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 23353 23931 . + . ID=gene-C9E93_RS05210;Name=C9E93_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05210;old_locus_tag=C9E93_05390 NZ_PYJV01000034.1 Protein Homology CDS 23353 23931 . + 0 ID=cds-WP_000993749.1;Parent=gene-C9E93_RS05210;Dbxref=GenBank:WP_000993749.1;Name=WP_000993749.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=C9E93_RS05210;product=phage baseplate assembly protein V;protein_id=WP_000993749.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 23928 24287 . + . ID=gene-C9E93_RS05215;Name=C9E93_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05215;old_locus_tag=C9E93_05395 NZ_PYJV01000034.1 Protein Homology CDS 23928 24287 . + 0 ID=cds-WP_135400595.1;Parent=gene-C9E93_RS05215;Dbxref=GenBank:WP_135400595.1;Name=WP_135400595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098787.1;locus_tag=C9E93_RS05215;product=GPW/gp25 family protein;protein_id=WP_135400595.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 24274 25182 . + . ID=gene-C9E93_RS05220;Name=C9E93_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05220;old_locus_tag=C9E93_05400 NZ_PYJV01000034.1 Protein Homology CDS 24274 25182 . + 0 ID=cds-WP_058215526.1;Parent=gene-C9E93_RS05220;Dbxref=GenBank:WP_058215526.1;Name=WP_058215526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=C9E93_RS05220;product=baseplate assembly protein;protein_id=WP_058215526.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 25175 25780 . + . ID=gene-C9E93_RS05225;Name=C9E93_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05225;old_locus_tag=C9E93_05405 NZ_PYJV01000034.1 Protein Homology CDS 25175 25780 . + 0 ID=cds-WP_135400596.1;Parent=gene-C9E93_RS05225;Dbxref=GenBank:WP_135400596.1;Name=WP_135400596.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=C9E93_RS05225;product=phage tail protein I;protein_id=WP_135400596.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 25777 27432 . + . ID=gene-C9E93_RS23860;Name=C9E93_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23860;old_locus_tag=C9E93_05410 NZ_PYJV01000034.1 Protein Homology CDS 25777 27432 . + 0 ID=cds-WP_135400597.1;Parent=gene-C9E93_RS23860;Dbxref=GenBank:WP_135400597.1;Name=WP_135400597.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274648.1;locus_tag=C9E93_RS23860;product=phage tail protein;protein_id=WP_135400597.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 27435 27974 . + . ID=gene-C9E93_RS05235;Name=C9E93_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05235;old_locus_tag=C9E93_05415 NZ_PYJV01000034.1 Protein Homology CDS 27435 27974 . + 0 ID=cds-WP_061377548.1;Parent=gene-C9E93_RS05235;Dbxref=GenBank:WP_061377548.1;Name=WP_061377548.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972188.1;locus_tag=C9E93_RS05235;product=tail fiber assembly protein;protein_id=WP_061377548.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 27978 28595 . - . ID=gene-C9E93_RS05240;Name=C9E93_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05240;old_locus_tag=C9E93_05420 NZ_PYJV01000034.1 Protein Homology CDS 27978 28595 . - 0 ID=cds-WP_077945906.1;Parent=gene-C9E93_RS05240;Dbxref=GenBank:WP_077945906.1;Name=WP_077945906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=C9E93_RS05240;product=tail fiber assembly protein;protein_id=WP_077945906.1;transl_table=11 NZ_PYJV01000034.1 RefSeq pseudogene 28565 29518 . - . ID=gene-C9E93_RS05245;Name=C9E93_RS05245;end_range=29518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS05245;old_locus_tag=C9E93_05425;partial=true;pseudo=true NZ_PYJV01000034.1 Protein Homology CDS 28565 29518 . - 0 ID=cds-C9E93_RS05245;Parent=gene-C9E93_RS05245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274642.1;locus_tag=C9E93_RS05245;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 29584 30141 . + . ID=gene-C9E93_RS05250;Name=fin;gbkey=Gene;gene=fin;gene_biotype=protein_coding;locus_tag=C9E93_RS05250;old_locus_tag=C9E93_05430 NZ_PYJV01000034.1 Protein Homology CDS 29584 30141 . + 0 ID=cds-WP_001165558.1;Parent=gene-C9E93_RS05250;Dbxref=GenBank:WP_001165558.1;Name=WP_001165558.1;gbkey=CDS;gene=fin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461630.1;locus_tag=C9E93_RS05250;product=serine-type DNA invertase Fin;protein_id=WP_001165558.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 30244 31416 . + . ID=gene-C9E93_RS05255;Name=C9E93_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05255;old_locus_tag=C9E93_05435 NZ_PYJV01000034.1 Protein Homology CDS 30244 31416 . + 0 ID=cds-WP_000046109.1;Parent=gene-C9E93_RS05255;Dbxref=GenBank:WP_000046109.1;Name=WP_000046109.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9E93_RS05255;product=phage tail sheath protein;protein_id=WP_000046109.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 31426 31941 . + . ID=gene-C9E93_RS05260;Name=C9E93_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05260;old_locus_tag=C9E93_05440 NZ_PYJV01000034.1 Protein Homology CDS 31426 31941 . + 0 ID=cds-WP_001207653.1;Parent=gene-C9E93_RS05260;Dbxref=GenBank:WP_001207653.1;Name=WP_001207653.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=C9E93_RS05260;product=phage major tail tube protein;protein_id=WP_001207653.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 31996 32298 . + . ID=gene-C9E93_RS05265;Name=C9E93_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05265;old_locus_tag=C9E93_05445 NZ_PYJV01000034.1 Protein Homology CDS 31996 32298 . + 0 ID=cds-WP_001280967.1;Parent=gene-C9E93_RS05265;Dbxref=GenBank:WP_001280967.1;Name=WP_001280967.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9E93_RS05265;product=phage tail assembly protein;protein_id=WP_001280967.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 32313 32432 . + . ID=gene-C9E93_RS05270;Name=C9E93_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05270;old_locus_tag=C9E93_05450 NZ_PYJV01000034.1 Protein Homology CDS 32313 32432 . + 0 ID=cds-WP_000763317.1;Parent=gene-C9E93_RS05270;Dbxref=GenBank:WP_000763317.1;Name=WP_000763317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9E93_RS05270;product=GpE family phage tail protein;protein_id=WP_000763317.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 32425 35232 . + . ID=gene-C9E93_RS05275;Name=C9E93_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05275;old_locus_tag=C9E93_05455 NZ_PYJV01000034.1 Protein Homology CDS 32425 35232 . + 0 ID=cds-WP_001282766.1;Parent=gene-C9E93_RS05275;Dbxref=GenBank:WP_001282766.1;Name=WP_001282766.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9E93_RS05275;product=phage tail tape measure protein;protein_id=WP_001282766.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 35229 35714 . + . ID=gene-C9E93_RS05280;Name=C9E93_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05280;old_locus_tag=C9E93_05460 NZ_PYJV01000034.1 Protein Homology CDS 35229 35714 . + 0 ID=cds-WP_135370336.1;Parent=gene-C9E93_RS05280;Dbxref=GenBank:WP_135370336.1;Name=WP_135370336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9E93_RS05280;product=phage tail protein;protein_id=WP_135370336.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 35711 36811 . + . ID=gene-C9E93_RS05285;Name=C9E93_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05285;old_locus_tag=C9E93_05465 NZ_PYJV01000034.1 Protein Homology CDS 35711 36811 . + 0 ID=cds-WP_135370337.1;Parent=gene-C9E93_RS05285;Dbxref=GenBank:WP_135370337.1;Name=WP_135370337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9E93_RS05285;product=phage late control D family protein;protein_id=WP_135370337.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 36880 37098 . + . ID=gene-C9E93_RS05290;Name=C9E93_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05290;old_locus_tag=C9E93_05470 NZ_PYJV01000034.1 Protein Homology CDS 36880 37098 . + 0 ID=cds-WP_000980498.1;Parent=gene-C9E93_RS05290;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9E93_RS05290;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 37216 37578 . - . ID=gene-C9E93_RS05295;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9E93_RS05295;old_locus_tag=C9E93_05475 NZ_PYJV01000034.1 cmsearch tmRNA 37216 37578 . - . ID=rna-C9E93_RS05295;Parent=gene-C9E93_RS05295;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05295;product=transfer-messenger RNA NZ_PYJV01000034.1 cmsearch exon 37216 37578 . - . ID=exon-C9E93_RS05295-1;Parent=rna-C9E93_RS05295;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05295;product=transfer-messenger RNA NZ_PYJV01000034.1 RefSeq gene 37650 38813 . - . ID=gene-C9E93_RS05300;Name=C9E93_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05300;old_locus_tag=C9E93_05480 NZ_PYJV01000034.1 Protein Homology CDS 37650 38813 . - 0 ID=cds-WP_077914383.1;Parent=gene-C9E93_RS05300;Dbxref=GenBank:WP_077914383.1;Name=WP_077914383.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9E93_RS05300;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_077914383.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 38821 41001 . - . ID=gene-C9E93_RS05305;Name=C9E93_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05305;old_locus_tag=C9E93_05485 NZ_PYJV01000034.1 Protein Homology CDS 38821 41001 . - 0 ID=cds-WP_001727766.1;Parent=gene-C9E93_RS05305;Dbxref=GenBank:WP_001727766.1;Name=WP_001727766.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9E93_RS05305;product=type I secretion system permease/ATPase;protein_id=WP_001727766.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 40998 42407 . - . ID=gene-C9E93_RS05310;Name=C9E93_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05310;old_locus_tag=C9E93_05490 NZ_PYJV01000034.1 Protein Homology CDS 40998 42407 . - 0 ID=cds-WP_135370338.1;Parent=gene-C9E93_RS05310;Dbxref=GenBank:WP_135370338.1;Name=WP_135370338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9E93_RS05310;product=TolC family outer membrane protein;protein_id=WP_135370338.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 42472 53946 . - . ID=gene-C9E93_RS05315;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9E93_RS05315;old_locus_tag=C9E93_05495 NZ_PYJV01000034.1 Protein Homology CDS 42472 53946 . - 0 ID=cds-WP_135370339.1;Parent=gene-C9E93_RS05315;Dbxref=GenBank:WP_135370339.1;Name=WP_135370339.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9E93_RS05315;product=biofilm-associated protein BapA;protein_id=WP_135370339.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 54565 55047 . - . ID=gene-C9E93_RS05320;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9E93_RS05320;old_locus_tag=C9E93_05500 NZ_PYJV01000034.1 Protein Homology CDS 54565 55047 . - 0 ID=cds-WP_001518569.1;Parent=gene-C9E93_RS05320;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9E93_RS05320;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 55236 55673 . + . ID=gene-C9E93_RS05325;Name=C9E93_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05325;old_locus_tag=C9E93_05505 NZ_PYJV01000034.1 Protein Homology CDS 55236 55673 . + 0 ID=cds-WP_001537508.1;Parent=gene-C9E93_RS05325;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9E93_RS05325;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 55663 55953 . + . ID=gene-C9E93_RS05330;Name=C9E93_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05330;old_locus_tag=C9E93_05510 NZ_PYJV01000034.1 Protein Homology CDS 55663 55953 . + 0 ID=cds-WP_001112990.1;Parent=gene-C9E93_RS05330;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9E93_RS05330;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 56119 56457 . - . ID=gene-C9E93_RS05335;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9E93_RS05335;old_locus_tag=C9E93_05515 NZ_PYJV01000034.1 Protein Homology CDS 56119 56457 . - 0 ID=cds-WP_001203445.1;Parent=gene-C9E93_RS05335;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9E93_RS05335;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 56606 58267 . - . ID=gene-C9E93_RS05340;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9E93_RS05340;old_locus_tag=C9E93_05520 NZ_PYJV01000034.1 Protein Homology CDS 56606 58267 . - 0 ID=cds-WP_000880965.1;Parent=gene-C9E93_RS05340;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9E93_RS05340;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 58353 59231 . - . ID=gene-C9E93_RS05345;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9E93_RS05345;old_locus_tag=C9E93_05525 NZ_PYJV01000034.1 Protein Homology CDS 58353 59231 . - 0 ID=cds-WP_001059155.1;Parent=gene-C9E93_RS05345;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9E93_RS05345;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 59355 59945 . + . ID=gene-C9E93_RS05355;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9E93_RS05355;old_locus_tag=C9E93_05535 NZ_PYJV01000034.1 Protein Homology CDS 59355 59945 . + 0 ID=cds-WP_001518875.1;Parent=gene-C9E93_RS05355;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9E93_RS05355;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 59980 60585 . - . ID=gene-C9E93_RS05360;Name=C9E93_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05360;old_locus_tag=C9E93_05540 NZ_PYJV01000034.1 Protein Homology CDS 59980 60585 . - 0 ID=cds-WP_001287923.1;Parent=gene-C9E93_RS05360;Dbxref=GenBank:WP_001287923.1;Name=WP_001287923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9E93_RS05360;product=DUF6630 family protein;protein_id=WP_001287923.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 60706 61992 . - . ID=gene-C9E93_RS05365;Name=C9E93_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05365;old_locus_tag=C9E93_05545 NZ_PYJV01000034.1 Protein Homology CDS 60706 61992 . - 0 ID=cds-WP_127172650.1;Parent=gene-C9E93_RS05365;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9E93_RS05365;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 62012 62803 . - . ID=gene-C9E93_RS05370;Name=C9E93_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05370;old_locus_tag=C9E93_05550 NZ_PYJV01000034.1 Protein Homology CDS 62012 62803 . - 0 ID=cds-WP_001537507.1;Parent=gene-C9E93_RS05370;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9E93_RS05370;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 62969 64330 . + . ID=gene-C9E93_RS05380;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9E93_RS05380;old_locus_tag=C9E93_05560 NZ_PYJV01000034.1 Protein Homology CDS 62969 64330 . + 0 ID=cds-WP_000460052.1;Parent=gene-C9E93_RS05380;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9E93_RS05380;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 64583 64831 . + . ID=gene-C9E93_RS05385;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9E93_RS05385;old_locus_tag=C9E93_05565 NZ_PYJV01000034.1 Protein Homology CDS 64583 64831 . + 0 ID=cds-WP_000256453.1;Parent=gene-C9E93_RS05385;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9E93_RS05385;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 64850 65398 . + . ID=gene-C9E93_RS05390;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9E93_RS05390;old_locus_tag=C9E93_05570 NZ_PYJV01000034.1 Protein Homology CDS 64850 65398 . + 0 ID=cds-WP_000043266.1;Parent=gene-C9E93_RS05390;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9E93_RS05390;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 65443 66210 . + . ID=gene-C9E93_RS05395;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9E93_RS05395;old_locus_tag=C9E93_05575 NZ_PYJV01000034.1 Protein Homology CDS 65443 66210 . + 0 ID=cds-WP_000469807.1;Parent=gene-C9E93_RS05395;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9E93_RS05395;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 66251 66598 . + . ID=gene-C9E93_RS05400;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9E93_RS05400;old_locus_tag=C9E93_05580 NZ_PYJV01000034.1 Protein Homology CDS 66251 66598 . + 0 ID=cds-WP_000065257.1;Parent=gene-C9E93_RS05400;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9E93_RS05400;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 66755 67975 . - . ID=gene-C9E93_RS05405;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9E93_RS05405;old_locus_tag=C9E93_05585 NZ_PYJV01000034.1 Protein Homology CDS 66755 67975 . - 0 ID=cds-WP_001030985.1;Parent=gene-C9E93_RS05405;Dbxref=GenBank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9E93_RS05405;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 67968 68486 . - . ID=gene-C9E93_RS05410;Name=C9E93_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05410;old_locus_tag=C9E93_05590 NZ_PYJV01000034.1 Protein Homology CDS 67968 68486 . - 0 ID=cds-WP_001212379.1;Parent=gene-C9E93_RS05410;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9E93_RS05410;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 68927 69997 . + . ID=gene-C9E93_RS05415;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9E93_RS05415;old_locus_tag=C9E93_05595 NZ_PYJV01000034.1 Protein Homology CDS 68927 69997 . + 0 ID=cds-WP_001168062.1;Parent=gene-C9E93_RS05415;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9E93_RS05415;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 70007 71128 . + . ID=gene-C9E93_RS05420;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9E93_RS05420;old_locus_tag=C9E93_05600 NZ_PYJV01000034.1 Protein Homology CDS 70007 71128 . + 0 ID=cds-WP_000225191.1;Parent=gene-C9E93_RS05420;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9E93_RS05420;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 71186 72094 . + . ID=gene-C9E93_RS05425;Name=C9E93_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05425;old_locus_tag=C9E93_05605 NZ_PYJV01000034.1 Protein Homology CDS 71186 72094 . + 0 ID=cds-WP_000210994.1;Parent=gene-C9E93_RS05425;Dbxref=GenBank:WP_000210994.1;Name=WP_000210994.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9E93_RS05425;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210994.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 72055 73215 . - . ID=gene-C9E93_RS05430;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9E93_RS05430;old_locus_tag=C9E93_05610 NZ_PYJV01000034.1 Protein Homology CDS 72055 73215 . - 0 ID=cds-WP_000200082.1;Parent=gene-C9E93_RS05430;Dbxref=GenBank:WP_000200082.1;Name=WP_000200082.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9E93_RS05430;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200082.1;transl_table=11 NZ_PYJV01000034.1 cmsearch sequence_feature 73238 73363 . - . ID=id-NZ_PYJV01000034.1:73238..73363;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000034.1 RefSeq gene 73315 73362 . - . ID=gene-C9E93_RS05435;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9E93_RS05435;old_locus_tag=C9E93_05615 NZ_PYJV01000034.1 Protein Homology CDS 73315 73362 . - 0 ID=cds-WP_010989056.1;Parent=gene-C9E93_RS05435;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9E93_RS05435;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 73466 73804 . - . ID=gene-C9E93_RS05440;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9E93_RS05440;old_locus_tag=C9E93_05620 NZ_PYJV01000034.1 Protein Homology CDS 73466 73804 . - 0 ID=cds-WP_000178449.1;Parent=gene-C9E93_RS05440;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9E93_RS05440;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 74076 74813 . - . ID=gene-C9E93_RS05450;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9E93_RS05450;old_locus_tag=C9E93_05625 NZ_PYJV01000034.1 Protein Homology CDS 74076 74813 . - 0 ID=cds-WP_000197660.1;Parent=gene-C9E93_RS05450;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9E93_RS05450;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 74945 75925 . + . ID=gene-C9E93_RS05455;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9E93_RS05455;old_locus_tag=C9E93_05630 NZ_PYJV01000034.1 Protein Homology CDS 74945 75925 . + 0 ID=cds-WP_000079130.1;Parent=gene-C9E93_RS05455;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9E93_RS05455;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 75922 76653 . + . ID=gene-C9E93_RS05460;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9E93_RS05460;old_locus_tag=C9E93_05635 NZ_PYJV01000034.1 Protein Homology CDS 75922 76653 . + 0 ID=cds-WP_000992639.1;Parent=gene-C9E93_RS05460;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9E93_RS05460;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_PYJV01000034.1 RefSeq gene 76783 79356 . + . ID=gene-C9E93_RS05465;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9E93_RS05465;old_locus_tag=C9E93_05640 NZ_PYJV01000034.1 Protein Homology CDS 76783 79356 . + 0 ID=cds-WP_001235092.1;Parent=gene-C9E93_RS05465;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9E93_RS05465;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 ##sequence-region NZ_PYJV01000078.1 1 79325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000078.1 RefSeq region 1 79325 . + . ID=NZ_PYJV01000078.1:1..79325;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000078.1 RefSeq gene 118 939 . + . ID=gene-C9E93_RS13135;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9E93_RS13135;old_locus_tag=C9E93_13460 NZ_PYJV01000078.1 Protein Homology CDS 118 939 . + 0 ID=cds-WP_001281933.1;Parent=gene-C9E93_RS13135;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9E93_RS13135;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 1044 2285 . - . ID=gene-C9E93_RS13140;Name=C9E93_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13140;old_locus_tag=C9E93_13465 NZ_PYJV01000078.1 Protein Homology CDS 1044 2285 . - 0 ID=cds-WP_000708447.1;Parent=gene-C9E93_RS13140;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9E93_RS13140;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 2348 2962 . - . ID=gene-C9E93_RS13145;Name=C9E93_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13145;old_locus_tag=C9E93_13470 NZ_PYJV01000078.1 Protein Homology CDS 2348 2962 . - 0 ID=cds-WP_001125341.1;Parent=gene-C9E93_RS13145;Dbxref=GenBank:WP_001125341.1;Name=WP_001125341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9E93_RS13145;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125341.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 3204 4505 . + . ID=gene-C9E93_RS13150;Name=C9E93_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13150;old_locus_tag=C9E93_13480 NZ_PYJV01000078.1 Protein Homology CDS 3204 4505 . + 0 ID=cds-WP_135370035.1;Parent=gene-C9E93_RS13150;Dbxref=GenBank:WP_135370035.1;Name=WP_135370035.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9E93_RS13150;product=CYTH domain-containing protein;protein_id=WP_135370035.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 4623 7466 . + . ID=gene-C9E93_RS13155;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9E93_RS13155;old_locus_tag=C9E93_13485 NZ_PYJV01000078.1 Protein Homology CDS 4623 7466 . + 0 ID=cds-WP_135400620.1;Parent=gene-C9E93_RS13155;Dbxref=GenBank:WP_135400620.1;Name=WP_135400620.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9E93_RS13155;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_135400620.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 7514 8947 . + . ID=gene-C9E93_RS13160;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9E93_RS13160;old_locus_tag=C9E93_13490 NZ_PYJV01000078.1 Protein Homology CDS 7514 8947 . + 0 ID=cds-WP_135370372.1;Parent=gene-C9E93_RS13160;Dbxref=GenBank:WP_135370372.1;Name=WP_135370372.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9E93_RS13160;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_135370372.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 9107 9166 . - . ID=gene-C9E93_RS23750;Name=C9E93_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23750 NZ_PYJV01000078.1 Protein Homology CDS 9107 9166 . - 0 ID=cds-WP_001804776.1;Parent=gene-C9E93_RS23750;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9E93_RS23750;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 9405 11084 . - . ID=gene-C9E93_RS13170;Name=C9E93_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13170;old_locus_tag=C9E93_13500 NZ_PYJV01000078.1 Protein Homology CDS 9405 11084 . - 0 ID=cds-WP_031604990.1;Parent=gene-C9E93_RS13170;Dbxref=GenBank:WP_031604990.1;Name=WP_031604990.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9E93_RS13170;product=flotillin family protein;protein_id=WP_031604990.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 11103 11723 . - . ID=gene-C9E93_RS13175;Name=C9E93_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13175;old_locus_tag=C9E93_13505 NZ_PYJV01000078.1 Protein Homology CDS 11103 11723 . - 0 ID=cds-WP_000171739.1;Parent=gene-C9E93_RS13175;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9E93_RS13175;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 11981 12190 . + . ID=gene-C9E93_RS13180;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9E93_RS13180;old_locus_tag=C9E93_13510 NZ_PYJV01000078.1 Protein Homology CDS 11981 12190 . + 0 ID=cds-WP_000928927.1;Parent=gene-C9E93_RS13180;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9E93_RS13180;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 12265 12561 . - . ID=gene-C9E93_RS13185;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=C9E93_RS13185;old_locus_tag=C9E93_13515 NZ_PYJV01000078.1 Protein Homology CDS 12265 12561 . - 0 ID=cds-WP_000566824.1;Parent=gene-C9E93_RS13185;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=C9E93_RS13185;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_PYJV01000078.1 cmsearch riboswitch 12694 12892 . + . ID=id-NZ_PYJV01000078.1:12694..12892;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000078.1 RefSeq gene 12998 13651 . + . ID=gene-C9E93_RS13190;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9E93_RS13190;old_locus_tag=C9E93_13520 NZ_PYJV01000078.1 Protein Homology CDS 12998 13651 . + 0 ID=cds-WP_001076978.1;Parent=gene-C9E93_RS13190;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9E93_RS13190;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 13822 14499 . - . ID=gene-C9E93_RS13195;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9E93_RS13195;old_locus_tag=C9E93_13525 NZ_PYJV01000078.1 Protein Homology CDS 13822 14499 . - 0 ID=cds-WP_000345576.1;Parent=gene-C9E93_RS13195;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9E93_RS13195;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 14514 15185 . - . ID=gene-C9E93_RS13200;Name=C9E93_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13200;old_locus_tag=C9E93_13530 NZ_PYJV01000078.1 Protein Homology CDS 14514 15185 . - 0 ID=cds-WP_000096230.1;Parent=gene-C9E93_RS13200;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9E93_RS13200;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 15205 17001 . - . ID=gene-C9E93_RS13205;Name=C9E93_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13205;old_locus_tag=C9E93_13535 NZ_PYJV01000078.1 Protein Homology CDS 15205 17001 . - 0 ID=cds-WP_000460265.1;Parent=gene-C9E93_RS13205;Dbxref=GenBank:WP_000460265.1;Name=WP_000460265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9E93_RS13205;product=aryl-sulfate sulfotransferase;protein_id=WP_000460265.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 17401 17577 . + . ID=gene-C9E93_RS24010;Name=C9E93_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24010;old_locus_tag=C9E93_13540 NZ_PYJV01000078.1 Protein Homology CDS 17401 17577 . + 0 ID=cds-WP_000469259.1;Parent=gene-C9E93_RS24010;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=C9E93_RS24010;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 17644 18417 . - . ID=gene-C9E93_RS13210;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9E93_RS13210;old_locus_tag=C9E93_13545 NZ_PYJV01000078.1 Protein Homology CDS 17644 18417 . - 0 ID=cds-WP_000115874.1;Parent=gene-C9E93_RS13210;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9E93_RS13210;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 18558 19346 . + . ID=gene-C9E93_RS13215;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9E93_RS13215;old_locus_tag=C9E93_13550 NZ_PYJV01000078.1 Protein Homology CDS 18558 19346 . + 0 ID=cds-WP_001520560.1;Parent=gene-C9E93_RS13215;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9E93_RS13215;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 19407 20570 . - . ID=gene-C9E93_RS13220;Name=C9E93_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13220;old_locus_tag=C9E93_13555 NZ_PYJV01000078.1 Protein Homology CDS 19407 20570 . - 0 ID=cds-WP_000442834.1;Parent=gene-C9E93_RS13220;Dbxref=GenBank:WP_000442834.1;Name=WP_000442834.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9E93_RS13220;product=glutathionylspermidine synthase family protein;protein_id=WP_000442834.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 20576 21247 . - . ID=gene-C9E93_RS13225;Name=C9E93_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13225;old_locus_tag=C9E93_13560 NZ_PYJV01000078.1 Protein Homology CDS 20576 21247 . - 0 ID=cds-WP_000831528.1;Parent=gene-C9E93_RS13225;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9E93_RS13225;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 21460 22935 . - . ID=gene-C9E93_RS13230;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9E93_RS13230;old_locus_tag=C9E93_13570 NZ_PYJV01000078.1 Protein Homology CDS 21460 22935 . - 0 ID=cds-WP_001663008.1;Parent=gene-C9E93_RS13230;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9E93_RS13230;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 23136 23768 . + . ID=gene-C9E93_RS13235;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9E93_RS13235;old_locus_tag=C9E93_13575 NZ_PYJV01000078.1 Protein Homology CDS 23136 23768 . + 0 ID=cds-WP_001231950.1;Parent=gene-C9E93_RS13235;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9E93_RS13235;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 23765 24187 . + . ID=gene-C9E93_RS13240;Name=C9E93_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13240;old_locus_tag=C9E93_13580 NZ_PYJV01000078.1 Protein Homology CDS 23765 24187 . + 0 ID=cds-WP_000833404.1;Parent=gene-C9E93_RS13240;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9E93_RS13240;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 24212 25039 . + . ID=gene-C9E93_RS13245;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9E93_RS13245;old_locus_tag=C9E93_13585 NZ_PYJV01000078.1 Protein Homology CDS 24212 25039 . + 0 ID=cds-WP_000444735.1;Parent=gene-C9E93_RS13245;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9E93_RS13245;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 25039 25620 . + . ID=gene-C9E93_RS13250;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9E93_RS13250;old_locus_tag=C9E93_13590 NZ_PYJV01000078.1 Protein Homology CDS 25039 25620 . + 0 ID=cds-WP_000105725.1;Parent=gene-C9E93_RS13250;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9E93_RS13250;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 25648 27540 . + . ID=gene-C9E93_RS13255;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9E93_RS13255;old_locus_tag=C9E93_13595 NZ_PYJV01000078.1 Protein Homology CDS 25648 27540 . + 0 ID=cds-WP_000195318.1;Parent=gene-C9E93_RS13255;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9E93_RS13255;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 27665 27979 . - . ID=gene-C9E93_RS13260;Name=C9E93_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13260;old_locus_tag=C9E93_13600 NZ_PYJV01000078.1 Protein Homology CDS 27665 27979 . - 0 ID=cds-WP_000958587.1;Parent=gene-C9E93_RS13260;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9E93_RS13260;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 28011 28592 . - . ID=gene-C9E93_RS13265;Name=C9E93_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13265;old_locus_tag=C9E93_13605 NZ_PYJV01000078.1 Protein Homology CDS 28011 28592 . - 0 ID=cds-WP_000065416.1;Parent=gene-C9E93_RS13265;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9E93_RS13265;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 28699 30048 . - . ID=gene-C9E93_RS13270;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9E93_RS13270;old_locus_tag=C9E93_13610 NZ_PYJV01000078.1 Protein Homology CDS 28699 30048 . - 0 ID=cds-WP_000779328.1;Parent=gene-C9E93_RS13270;Dbxref=GenBank:WP_000779328.1;Name=WP_000779328.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9E93_RS13270;product=quorum sensing histidine kinase QseC;protein_id=WP_000779328.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 30045 30704 . - . ID=gene-C9E93_RS13275;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9E93_RS13275;old_locus_tag=C9E93_13615 NZ_PYJV01000078.1 Protein Homology CDS 30045 30704 . - 0 ID=cds-WP_001221574.1;Parent=gene-C9E93_RS13275;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9E93_RS13275;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 30856 31248 . + . ID=gene-C9E93_RS13280;Name=C9E93_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13280;old_locus_tag=C9E93_13620 NZ_PYJV01000078.1 Protein Homology CDS 30856 31248 . + 0 ID=cds-WP_000731552.1;Parent=gene-C9E93_RS13280;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9E93_RS13280;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 31320 32186 . + . ID=gene-C9E93_RS13285;Name=C9E93_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13285;old_locus_tag=C9E93_13625 NZ_PYJV01000078.1 Protein Homology CDS 31320 32186 . + 0 ID=cds-WP_000998796.1;Parent=gene-C9E93_RS13285;Dbxref=GenBank:WP_000998796.1;Name=WP_000998796.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9E93_RS13285;product=AraC family transcriptional regulator;protein_id=WP_000998796.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 32297 34555 . + . ID=gene-C9E93_RS13290;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9E93_RS13290;old_locus_tag=C9E93_13630 NZ_PYJV01000078.1 Protein Homology CDS 32297 34555 . + 0 ID=cds-WP_001281853.1;Parent=gene-C9E93_RS13290;Dbxref=GenBank:WP_001281853.1;Name=WP_001281853.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9E93_RS13290;product=DNA topoisomerase IV subunit A;protein_id=WP_001281853.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 34812 35549 . + . ID=gene-C9E93_RS13295;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9E93_RS13295;old_locus_tag=C9E93_13635 NZ_PYJV01000078.1 Protein Homology CDS 34812 35549 . + 0 ID=cds-WP_000965730.1;Parent=gene-C9E93_RS13295;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9E93_RS13295;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 35623 37035 . + . ID=gene-C9E93_RS13300;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9E93_RS13300;old_locus_tag=C9E93_13640 NZ_PYJV01000078.1 Protein Homology CDS 35623 37035 . + 0 ID=cds-WP_000010658.1;Parent=gene-C9E93_RS13300;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9E93_RS13300;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 37080 38387 . - . ID=gene-C9E93_RS13305;Name=C9E93_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13305;old_locus_tag=C9E93_13645 NZ_PYJV01000078.1 Protein Homology CDS 37080 38387 . - 0 ID=cds-WP_000345259.1;Parent=gene-C9E93_RS13305;Dbxref=GenBank:WP_000345259.1;Name=WP_000345259.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9E93_RS13305;product=TRAP transporter large permease;protein_id=WP_000345259.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 38398 38880 . - . ID=gene-C9E93_RS13310;Name=C9E93_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13310;old_locus_tag=C9E93_13650 NZ_PYJV01000078.1 Protein Homology CDS 38398 38880 . - 0 ID=cds-WP_001221828.1;Parent=gene-C9E93_RS13310;Dbxref=GenBank:WP_001221828.1;Name=WP_001221828.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9E93_RS13310;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 38922 39905 . - . ID=gene-C9E93_RS13315;Name=C9E93_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13315;old_locus_tag=C9E93_13655 NZ_PYJV01000078.1 Protein Homology CDS 38922 39905 . - 0 ID=cds-WP_000799367.1;Parent=gene-C9E93_RS13315;Dbxref=GenBank:WP_000799367.1;Name=WP_000799367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9E93_RS13315;product=TRAP transporter substrate-binding protein;protein_id=WP_000799367.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 40393 42564 . + . ID=gene-C9E93_RS13320;Name=C9E93_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13320;old_locus_tag=C9E93_13660 NZ_PYJV01000078.1 Protein Homology CDS 40393 42564 . + 0 ID=cds-WP_001626724.1;Parent=gene-C9E93_RS13320;Dbxref=GenBank:WP_001626724.1;Name=WP_001626724.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9E93_RS13320;product=YgiQ family radical SAM protein;protein_id=WP_001626724.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 42767 42961 . + . ID=gene-C9E93_RS13325;Name=C9E93_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13325;old_locus_tag=C9E93_13665 NZ_PYJV01000078.1 GeneMarkS-2+ CDS 42767 42961 . + 0 ID=cds-WP_000525382.1;Parent=gene-C9E93_RS13325;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS13325;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 43119 43574 . - . ID=gene-C9E93_RS13335;Name=C9E93_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13335;old_locus_tag=C9E93_13670 NZ_PYJV01000078.1 Protein Homology CDS 43119 43574 . - 0 ID=cds-WP_000128242.1;Parent=gene-C9E93_RS13335;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9E93_RS13335;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_PYJV01000078.1 RefSeq pseudogene 43619 45104 . - . ID=gene-C9E93_RS13340;Name=C9E93_RS13340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13340;old_locus_tag=C9E93_13675;pseudo=true NZ_PYJV01000078.1 Protein Homology CDS 43619 45104 . - 0 ID=cds-C9E93_RS13340;Parent=gene-C9E93_RS13340;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9E93_RS13340;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 45270 46097 . - . ID=gene-C9E93_RS13345;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9E93_RS13345;old_locus_tag=C9E93_13680 NZ_PYJV01000078.1 Protein Homology CDS 45270 46097 . - 0 ID=cds-WP_000013100.1;Parent=gene-C9E93_RS13345;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9E93_RS13345;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 46203 47366 . - . ID=gene-C9E93_RS13350;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9E93_RS13350;old_locus_tag=C9E93_13685 NZ_PYJV01000078.1 Protein Homology CDS 46203 47366 . - 0 ID=cds-WP_021000785.1;Parent=gene-C9E93_RS13350;Dbxref=GenBank:WP_021000785.1;Name=WP_021000785.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9E93_RS13350;product=alcohol dehydrogenase;protein_id=WP_021000785.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 47559 48458 . + . ID=gene-C9E93_RS13355;Name=C9E93_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13355;old_locus_tag=C9E93_13690 NZ_PYJV01000078.1 Protein Homology CDS 47559 48458 . + 0 ID=cds-WP_001078198.1;Parent=gene-C9E93_RS13355;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9E93_RS13355;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 48522 49181 . - . ID=gene-C9E93_RS13360;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=C9E93_RS13360;old_locus_tag=C9E93_13695 NZ_PYJV01000078.1 Protein Homology CDS 48522 49181 . - 0 ID=cds-WP_000268444.1;Parent=gene-C9E93_RS13360;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9E93_RS13360;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 49321 50508 . - . ID=gene-C9E93_RS13365;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9E93_RS13365;old_locus_tag=C9E93_13700 NZ_PYJV01000078.1 Protein Homology CDS 49321 50508 . - 0 ID=cds-WP_001524032.1;Parent=gene-C9E93_RS13365;Dbxref=GenBank:WP_001524032.1;Name=WP_001524032.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9E93_RS13365;product=cystathionine beta-lyase;protein_id=WP_001524032.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 50760 51494 . + . ID=gene-C9E93_RS13370;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9E93_RS13370;old_locus_tag=C9E93_13710 NZ_PYJV01000078.1 Protein Homology CDS 50760 51494 . + 0 ID=cds-WP_000527859.1;Parent=gene-C9E93_RS13370;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9E93_RS13370;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 51501 51926 . + . ID=gene-C9E93_RS13375;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9E93_RS13375;old_locus_tag=C9E93_13715 NZ_PYJV01000078.1 Protein Homology CDS 51501 51926 . + 0 ID=cds-WP_001251476.1;Parent=gene-C9E93_RS13375;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9E93_RS13375;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 52039 52923 . - . ID=gene-C9E93_RS13380;Name=C9E93_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13380;old_locus_tag=C9E93_13720 NZ_PYJV01000078.1 Protein Homology CDS 52039 52923 . - 0 ID=cds-WP_000019032.1;Parent=gene-C9E93_RS13380;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9E93_RS13380;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 53047 53451 . - . ID=gene-C9E93_RS13385;Name=C9E93_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13385;old_locus_tag=C9E93_13725 NZ_PYJV01000078.1 Protein Homology CDS 53047 53451 . - 0 ID=cds-WP_000665657.1;Parent=gene-C9E93_RS13385;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9E93_RS13385;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 53438 53848 . - . ID=gene-C9E93_RS13390;Name=C9E93_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13390;old_locus_tag=C9E93_13730 NZ_PYJV01000078.1 Protein Homology CDS 53438 53848 . - 0 ID=cds-WP_000936440.1;Parent=gene-C9E93_RS13390;Dbxref=GenBank:WP_000936440.1;Name=WP_000936440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9E93_RS13390;product=hypothetical protein;protein_id=WP_000936440.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 53952 54455 . + . ID=gene-C9E93_RS13395;Name=C9E93_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13395;old_locus_tag=C9E93_13735 NZ_PYJV01000078.1 Protein Homology CDS 53952 54455 . + 0 ID=cds-WP_001532618.1;Parent=gene-C9E93_RS13395;Dbxref=GenBank:WP_001532618.1;Name=WP_001532618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=C9E93_RS13395;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001532618.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 54526 55020 . + . ID=gene-C9E93_RS13400;Name=C9E93_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13400;old_locus_tag=C9E93_13740 NZ_PYJV01000078.1 Protein Homology CDS 54526 55020 . + 0 ID=cds-WP_000439335.1;Parent=gene-C9E93_RS13400;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9E93_RS13400;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 55327 56970 . + . ID=gene-C9E93_RS13405;Name=C9E93_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13405;old_locus_tag=C9E93_13745 NZ_PYJV01000078.1 Protein Homology CDS 55327 56970 . + 0 ID=cds-WP_021000782.1;Parent=gene-C9E93_RS13405;Dbxref=GenBank:WP_021000782.1;Name=WP_021000782.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9E93_RS13405;product=methyl-accepting chemotaxis protein;protein_id=WP_021000782.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 57055 57342 . + . ID=gene-C9E93_RS13410;Name=C9E93_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13410;old_locus_tag=C9E93_13750 NZ_PYJV01000078.1 Protein Homology CDS 57055 57342 . + 0 ID=cds-WP_001059119.1;Parent=gene-C9E93_RS13410;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9E93_RS13410;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 57532 58650 . + . ID=gene-C9E93_RS13415;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9E93_RS13415;old_locus_tag=C9E93_13760 NZ_PYJV01000078.1 Protein Homology CDS 57532 58650 . + 0 ID=cds-WP_000145429.1;Parent=gene-C9E93_RS13415;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9E93_RS13415;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 58653 59639 . + . ID=gene-C9E93_RS13420;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9E93_RS13420;old_locus_tag=C9E93_13765 NZ_PYJV01000078.1 Protein Homology CDS 58653 59639 . + 0 ID=cds-WP_001081721.1;Parent=gene-C9E93_RS13420;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9E93_RS13420;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 59629 60807 . + . ID=gene-C9E93_RS13425;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9E93_RS13425;old_locus_tag=C9E93_13770 NZ_PYJV01000078.1 Protein Homology CDS 59629 60807 . + 0 ID=cds-WP_000017678.1;Parent=gene-C9E93_RS13425;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9E93_RS13425;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 60804 62507 . + . ID=gene-C9E93_RS13430;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9E93_RS13430;old_locus_tag=C9E93_13775 NZ_PYJV01000078.1 Protein Homology CDS 60804 62507 . + 0 ID=cds-WP_000083044.1;Parent=gene-C9E93_RS13430;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9E93_RS13430;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 62507 63001 . + . ID=gene-C9E93_RS13435;Name=C9E93_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13435;old_locus_tag=C9E93_13780 NZ_PYJV01000078.1 Protein Homology CDS 62507 63001 . + 0 ID=cds-WP_001221962.1;Parent=gene-C9E93_RS13435;Dbxref=GenBank:WP_001221962.1;Name=WP_001221962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9E93_RS13435;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221962.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 62994 63482 . + . ID=gene-C9E93_RS13440;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9E93_RS13440;old_locus_tag=C9E93_13785 NZ_PYJV01000078.1 Protein Homology CDS 62994 63482 . + 0 ID=cds-WP_000004951.1;Parent=gene-C9E93_RS13440;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9E93_RS13440;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 63475 63816 . + . ID=gene-C9E93_RS13445;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E93_RS13445;old_locus_tag=C9E93_13790 NZ_PYJV01000078.1 Protein Homology CDS 63475 63816 . + 0 ID=cds-WP_000544945.1;Parent=gene-C9E93_RS13445;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9E93_RS13445;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 63844 64092 . + . ID=gene-C9E93_RS13450;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9E93_RS13450;old_locus_tag=C9E93_13795 NZ_PYJV01000078.1 Protein Homology CDS 63844 64092 . + 0 ID=cds-WP_000334890.1;Parent=gene-C9E93_RS13450;Dbxref=GenBank:WP_000334890.1;Name=WP_000334890.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9E93_RS13450;product=hydrogenase maturation factor HybG;protein_id=WP_000334890.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 64168 65220 . + . ID=gene-C9E93_RS13455;Name=C9E93_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13455;old_locus_tag=C9E93_13800 NZ_PYJV01000078.1 Protein Homology CDS 64168 65220 . + 0 ID=cds-WP_135370022.1;Parent=gene-C9E93_RS13455;Dbxref=GenBank:WP_135370022.1;Name=WP_135370022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9E93_RS13455;product=ABC transporter substrate-binding protein;protein_id=WP_135370022.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 65220 65930 . + . ID=gene-C9E93_RS13460;Name=C9E93_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13460;old_locus_tag=C9E93_13805 NZ_PYJV01000078.1 Protein Homology CDS 65220 65930 . + 0 ID=cds-WP_001220943.1;Parent=gene-C9E93_RS13460;Dbxref=GenBank:WP_001220943.1;Name=WP_001220943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9E93_RS13460;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001220943.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 65998 66864 . - . ID=gene-C9E93_RS13465;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9E93_RS13465;old_locus_tag=C9E93_13810 NZ_PYJV01000078.1 Protein Homology CDS 65998 66864 . - 0 ID=cds-WP_000774852.1;Parent=gene-C9E93_RS13465;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9E93_RS13465;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 67091 68947 . + . ID=gene-C9E93_RS13470;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9E93_RS13470;old_locus_tag=C9E93_13815 NZ_PYJV01000078.1 Protein Homology CDS 67091 68947 . + 0 ID=cds-WP_135370021.1;Parent=gene-C9E93_RS13470;Dbxref=GenBank:WP_135370021.1;Name=WP_135370021.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9E93_RS13470;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_135370021.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 69617 70675 . + . ID=gene-C9E93_RS13480;Name=C9E93_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13480;old_locus_tag=C9E93_13825 NZ_PYJV01000078.1 Protein Homology CDS 69617 70675 . + 0 ID=cds-WP_000475245.1;Parent=gene-C9E93_RS13480;Dbxref=GenBank:WP_000475245.1;Name=WP_000475245.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9E93_RS13480;product=methyl-accepting chemotaxis protein;protein_id=WP_000475245.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 70975 72387 . - . ID=gene-C9E93_RS13485;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=C9E93_RS13485;old_locus_tag=C9E93_13830 NZ_PYJV01000078.1 Protein Homology CDS 70975 72387 . - 0 ID=cds-WP_135370020.1;Parent=gene-C9E93_RS13485;Dbxref=GenBank:WP_135370020.1;Name=WP_135370020.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9E93_RS13485;product=glucuronate isomerase;protein_id=WP_135370020.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 72399 73871 . - . ID=gene-C9E93_RS13490;Name=C9E93_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13490;old_locus_tag=C9E93_13835 NZ_PYJV01000078.1 Protein Homology CDS 72399 73871 . - 0 ID=cds-WP_001620029.1;Parent=gene-C9E93_RS13490;Dbxref=GenBank:WP_001620029.1;Name=WP_001620029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9E93_RS13490;product=fructuronate reductase;protein_id=WP_001620029.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 73982 75166 . - . ID=gene-C9E93_RS13495;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9E93_RS13495;old_locus_tag=C9E93_13840 NZ_PYJV01000078.1 Protein Homology CDS 73982 75166 . - 0 ID=cds-WP_000815487.1;Parent=gene-C9E93_RS13495;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9E93_RS13495;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 75571 76875 . + . ID=gene-C9E93_RS13505;Name=C9E93_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13505;old_locus_tag=C9E93_13850 NZ_PYJV01000078.1 Protein Homology CDS 75571 76875 . + 0 ID=cds-WP_000784371.1;Parent=gene-C9E93_RS13505;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9E93_RS13505;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 77271 78149 . + . ID=gene-C9E93_RS13510;Name=C9E93_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13510;old_locus_tag=C9E93_13855 NZ_PYJV01000078.1 Protein Homology CDS 77271 78149 . + 0 ID=cds-WP_023260164.1;Parent=gene-C9E93_RS13510;Dbxref=GenBank:WP_023260164.1;Name=WP_023260164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9E93_RS13510;product=carbon-nitrogen hydrolase family protein;protein_id=WP_023260164.1;transl_table=11 NZ_PYJV01000078.1 RefSeq gene 78188 79111 . + . ID=gene-C9E93_RS13515;Name=C9E93_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13515;old_locus_tag=C9E93_13860 NZ_PYJV01000078.1 Protein Homology CDS 78188 79111 . + 0 ID=cds-WP_000540892.1;Parent=gene-C9E93_RS13515;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9E93_RS13515;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11 ##sequence-region NZ_PYJV01000022.1 1 78566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000022.1 RefSeq region 1 78566 . + . ID=NZ_PYJV01000022.1:1..78566;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000022.1 RefSeq gene 137 925 . - . ID=gene-C9E93_RS02455;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9E93_RS02455;old_locus_tag=C9E93_02540 NZ_PYJV01000022.1 Protein Homology CDS 137 925 . - 0 ID=cds-WP_000533526.1;Parent=gene-C9E93_RS02455;Dbxref=GenBank:WP_000533526.1;Name=WP_000533526.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533526.1;locus_tag=C9E93_RS02455;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533526.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 1818 3326 . - . ID=gene-C9E93_RS02460;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9E93_RS02460;old_locus_tag=C9E93_02550 NZ_PYJV01000022.1 Protein Homology CDS 1818 3326 . - 0 ID=cds-WP_001018467.1;Parent=gene-C9E93_RS02460;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9E93_RS02460;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 3747 7709 . + . ID=gene-C9E93_RS02465;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9E93_RS02465;old_locus_tag=C9E93_02560 NZ_PYJV01000022.1 Protein Homology CDS 3747 7709 . + 0 ID=cds-WP_135370508.1;Parent=gene-C9E93_RS02465;Dbxref=GenBank:WP_135370508.1;Name=WP_135370508.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9E93_RS02465;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_135370508.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 7768 8163 . + . ID=gene-C9E93_RS02470;Name=C9E93_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02470;old_locus_tag=C9E93_02565 NZ_PYJV01000022.1 Protein Homology CDS 7768 8163 . + 0 ID=cds-WP_000821059.1;Parent=gene-C9E93_RS02470;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=C9E93_RS02470;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 8160 8798 . - . ID=gene-C9E93_RS02475;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9E93_RS02475;old_locus_tag=C9E93_02570 NZ_PYJV01000022.1 Protein Homology CDS 8160 8798 . - 0 ID=cds-WP_000083128.1;Parent=gene-C9E93_RS02475;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9E93_RS02475;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 8935 9102 . - . ID=gene-C9E93_RS02480;Name=C9E93_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02480;old_locus_tag=C9E93_02575 NZ_PYJV01000022.1 Protein Homology CDS 8935 9102 . - 0 ID=cds-WP_001273663.1;Parent=gene-C9E93_RS02480;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9E93_RS02480;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 9487 10083 . + . ID=gene-C9E93_RS02485;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9E93_RS02485;old_locus_tag=C9E93_02580 NZ_PYJV01000022.1 Protein Homology CDS 9487 10083 . + 0 ID=cds-WP_001062898.1;Parent=gene-C9E93_RS02485;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9E93_RS02485;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 10104 10331 . + . ID=gene-C9E93_RS02490;Name=C9E93_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02490;old_locus_tag=C9E93_02585 NZ_PYJV01000022.1 Protein Homology CDS 10104 10331 . + 0 ID=cds-WP_001143125.1;Parent=gene-C9E93_RS02490;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9E93_RS02490;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 10365 11606 . - . ID=gene-C9E93_RS02495;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9E93_RS02495;old_locus_tag=C9E93_02590 NZ_PYJV01000022.1 Protein Homology CDS 10365 11606 . - 0 ID=cds-WP_000749202.1;Parent=gene-C9E93_RS02495;Dbxref=GenBank:WP_000749202.1;Name=WP_000749202.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9E93_RS02495;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749202.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 11739 12245 . - . ID=gene-C9E93_RS02500;Name=C9E93_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02500;old_locus_tag=C9E93_02595 NZ_PYJV01000022.1 Protein Homology CDS 11739 12245 . - 0 ID=cds-WP_000729206.1;Parent=gene-C9E93_RS02500;Dbxref=GenBank:WP_000729206.1;Name=WP_000729206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9E93_RS02500;product=protein disulfide oxidoreductase;protein_id=WP_000729206.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 12235 12858 . - . ID=gene-C9E93_RS02505;Name=C9E93_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02505;old_locus_tag=C9E93_02600 NZ_PYJV01000022.1 Protein Homology CDS 12235 12858 . - 0 ID=cds-WP_000876687.1;Parent=gene-C9E93_RS02505;Dbxref=GenBank:WP_000876687.1;Name=WP_000876687.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9E93_RS02505;product=DsbA family protein;protein_id=WP_000876687.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 12855 14741 . - . ID=gene-C9E93_RS02510;Name=C9E93_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02510;old_locus_tag=C9E93_02605 NZ_PYJV01000022.1 Protein Homology CDS 12855 14741 . - 0 ID=cds-WP_135370507.1;Parent=gene-C9E93_RS02510;Dbxref=GenBank:WP_135370507.1;Name=WP_135370507.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9E93_RS02510;product=protein-disulfide reductase DsbD family protein;protein_id=WP_135370507.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 14790 15152 . - . ID=gene-C9E93_RS02515;Name=C9E93_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02515;old_locus_tag=C9E93_02610 NZ_PYJV01000022.1 Protein Homology CDS 14790 15152 . - 0 ID=cds-WP_001118902.1;Parent=gene-C9E93_RS02515;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9E93_RS02515;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 15388 16308 . + . ID=gene-C9E93_RS02520;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9E93_RS02520;old_locus_tag=C9E93_02620 NZ_PYJV01000022.1 Protein Homology CDS 15388 16308 . + 0 ID=cds-WP_000420603.1;Parent=gene-C9E93_RS02520;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9E93_RS02520;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 16308 16613 . + . ID=gene-C9E93_RS02525;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9E93_RS02525;old_locus_tag=C9E93_02625 NZ_PYJV01000022.1 Protein Homology CDS 16308 16613 . + 0 ID=cds-WP_001284251.1;Parent=gene-C9E93_RS02525;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=C9E93_RS02525;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 17267 17629 . + . ID=gene-C9E93_RS02535;Name=C9E93_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02535;old_locus_tag=C9E93_02635 NZ_PYJV01000022.1 Protein Homology CDS 17267 17629 . + 0 ID=cds-WP_001537781.1;Parent=gene-C9E93_RS02535;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9E93_RS02535;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 18037 18975 . - . ID=gene-C9E93_RS02540;Name=C9E93_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02540;old_locus_tag=C9E93_02640 NZ_PYJV01000022.1 Protein Homology CDS 18037 18975 . - 0 ID=cds-WP_000976561.1;Parent=gene-C9E93_RS02540;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9E93_RS02540;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 18989 19885 . - . ID=gene-C9E93_RS02545;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9E93_RS02545;old_locus_tag=C9E93_02645 NZ_PYJV01000022.1 Protein Homology CDS 18989 19885 . - 0 ID=cds-WP_000336602.1;Parent=gene-C9E93_RS02545;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9E93_RS02545;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 19895 21271 . - . ID=gene-C9E93_RS02550;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9E93_RS02550;old_locus_tag=C9E93_02650 NZ_PYJV01000022.1 Protein Homology CDS 19895 21271 . - 0 ID=cds-WP_017440944.1;Parent=gene-C9E93_RS02550;Dbxref=GenBank:WP_017440944.1;Name=WP_017440944.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9E93_RS02550;product=4-hydroxyphenylacetate permease;protein_id=WP_017440944.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 21343 22134 . - . ID=gene-C9E93_RS02555;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9E93_RS02555;old_locus_tag=C9E93_02655 NZ_PYJV01000022.1 Protein Homology CDS 21343 22134 . - 0 ID=cds-WP_135370626.1;Parent=gene-C9E93_RS02555;Dbxref=GenBank:WP_135370626.1;Name=WP_135370626.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9E93_RS02555;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_135370626.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 22145 22948 . - . ID=gene-C9E93_RS02560;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9E93_RS02560;old_locus_tag=C9E93_02660 NZ_PYJV01000022.1 Protein Homology CDS 22145 22948 . - 0 ID=cds-WP_000884795.1;Parent=gene-C9E93_RS02560;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9E93_RS02560;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 23093 23473 . - . ID=gene-C9E93_RS02565;Name=C9E93_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02565;old_locus_tag=C9E93_02665 NZ_PYJV01000022.1 Protein Homology CDS 23093 23473 . - 0 ID=cds-WP_001119857.1;Parent=gene-C9E93_RS02565;Dbxref=GenBank:WP_001119857.1;Name=WP_001119857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9E93_RS02565;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119857.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 23483 24334 . - . ID=gene-C9E93_RS02570;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9E93_RS02570;old_locus_tag=C9E93_02670 NZ_PYJV01000022.1 Protein Homology CDS 23483 24334 . - 0 ID=cds-WP_080233144.1;Parent=gene-C9E93_RS02570;Dbxref=GenBank:WP_080233144.1;Name=WP_080233144.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9E93_RS02570;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_080233144.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 24336 25802 . - . ID=gene-C9E93_RS02575;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9E93_RS02575;old_locus_tag=C9E93_02675 NZ_PYJV01000022.1 Protein Homology CDS 24336 25802 . - 0 ID=cds-WP_000723529.1;Parent=gene-C9E93_RS02575;Dbxref=GenBank:WP_000723529.1;Name=WP_000723529.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9E93_RS02575;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723529.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 25799 27088 . - . ID=gene-C9E93_RS02580;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9E93_RS02580;old_locus_tag=C9E93_02680 NZ_PYJV01000022.1 Protein Homology CDS 25799 27088 . - 0 ID=cds-WP_000679210.1;Parent=gene-C9E93_RS02580;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9E93_RS02580;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 27363 27803 . + . ID=gene-C9E93_RS02585;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9E93_RS02585;old_locus_tag=C9E93_02685 NZ_PYJV01000022.1 Protein Homology CDS 27363 27803 . + 0 ID=cds-WP_000543922.1;Parent=gene-C9E93_RS02585;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9E93_RS02585;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 28021 29583 . + . ID=gene-C9E93_RS02590;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9E93_RS02590;old_locus_tag=C9E93_02690 NZ_PYJV01000022.1 Protein Homology CDS 28021 29583 . + 0 ID=cds-WP_000801496.1;Parent=gene-C9E93_RS02590;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9E93_RS02590;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 29601 30113 . + . ID=gene-C9E93_RS02595;Name=C9E93_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02595;old_locus_tag=C9E93_02695 NZ_PYJV01000022.1 Protein Homology CDS 29601 30113 . + 0 ID=cds-WP_001195556.1;Parent=gene-C9E93_RS02595;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9E93_RS02595;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 30446 30856 . - . ID=gene-C9E93_RS02600;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9E93_RS02600;old_locus_tag=C9E93_02710 NZ_PYJV01000022.1 Protein Homology CDS 30446 30856 . - 0 ID=cds-WP_000833182.1;Parent=gene-C9E93_RS02600;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9E93_RS02600;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 30992 31672 . + . ID=gene-C9E93_RS02605;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=C9E93_RS02605;old_locus_tag=C9E93_02715 NZ_PYJV01000022.1 Protein Homology CDS 30992 31672 . + 0 ID=cds-WP_023258270.1;Parent=gene-C9E93_RS02605;Dbxref=GenBank:WP_023258270.1;Name=WP_023258270.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9E93_RS02605;product=response regulator transcription factor HprR;protein_id=WP_023258270.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 31665 33029 . + . ID=gene-C9E93_RS02610;Name=C9E93_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02610;old_locus_tag=C9E93_02720 NZ_PYJV01000022.1 Protein Homology CDS 31665 33029 . + 0 ID=cds-WP_000240026.1;Parent=gene-C9E93_RS02610;Dbxref=GenBank:WP_000240026.1;Name=WP_000240026.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9E93_RS02610;product=heavy metal sensor histidine kinase;protein_id=WP_000240026.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 33202 34671 . + . ID=gene-C9E93_RS02615;Name=C9E93_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02615;old_locus_tag=C9E93_02725 NZ_PYJV01000022.1 Protein Homology CDS 33202 34671 . + 0 ID=cds-WP_000760235.1;Parent=gene-C9E93_RS02615;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9E93_RS02615;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 34780 34890 . + . ID=gene-C9E93_RS02620;Name=C9E93_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02620;old_locus_tag=C9E93_02730 NZ_PYJV01000022.1 Protein Homology CDS 34780 34890 . + 0 ID=cds-WP_000174813.1;Parent=gene-C9E93_RS02620;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9E93_RS02620;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 34891 35061 . - . ID=gene-C9E93_RS02625;Name=C9E93_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02625;old_locus_tag=C9E93_02735 NZ_PYJV01000022.1 Protein Homology CDS 34891 35061 . - 0 ID=cds-WP_001111006.1;Parent=gene-C9E93_RS02625;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9E93_RS02625;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 35395 37080 . + . ID=gene-C9E93_RS02630;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=C9E93_RS02630;old_locus_tag=C9E93_02740 NZ_PYJV01000022.1 Protein Homology CDS 35395 37080 . + 0 ID=cds-WP_135370355.1;Parent=gene-C9E93_RS02630;Dbxref=GenBank:WP_135370355.1;Name=WP_135370355.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9E93_RS02630;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_135370355.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 37097 37438 . + . ID=gene-C9E93_RS02635;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9E93_RS02635;old_locus_tag=C9E93_02745 NZ_PYJV01000022.1 Protein Homology CDS 37097 37438 . + 0 ID=cds-WP_047607139.1;Parent=gene-C9E93_RS02635;Dbxref=GenBank:WP_047607139.1;Name=WP_047607139.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9E93_RS02635;product=type III secretion system chaperone SigE;protein_id=WP_047607139.1;transl_table=11 NZ_PYJV01000022.1 RefSeq pseudogene 37448 37769 . - . ID=gene-C9E93_RS23825;Name=C9E93_RS23825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23825;pseudo=true NZ_PYJV01000022.1 Protein Homology CDS 37448 37769 . - 0 ID=cds-C9E93_RS23825;Parent=gene-C9E93_RS23825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E93_RS23825;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 38420 39295 . + . ID=gene-C9E93_RS02640;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9E93_RS02640;old_locus_tag=C9E93_02750 NZ_PYJV01000022.1 Protein Homology CDS 38420 39295 . + 0 ID=cds-WP_135370168.1;Parent=gene-C9E93_RS02640;Dbxref=GenBank:WP_135370168.1;Name=WP_135370168.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9E93_RS02640;product=SPI-2 type III secretion system effector PipB;protein_id=WP_135370168.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 39517 40197 . + . ID=gene-C9E93_RS02645;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9E93_RS02645;old_locus_tag=C9E93_02755 NZ_PYJV01000022.1 Protein Homology CDS 39517 40197 . + 0 ID=cds-WP_031605209.1;Parent=gene-C9E93_RS02645;Dbxref=GenBank:WP_031605209.1;Name=WP_031605209.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9E93_RS02645;product=type III secretion system effector protease PipA;protein_id=WP_031605209.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 40334 40421 . - . ID=gene-C9E93_RS02650;Name=C9E93_RS02650;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS02650;old_locus_tag=C9E93_02760 NZ_PYJV01000022.1 tRNAscan-SE tRNA 40334 40421 . - . ID=rna-C9E93_RS02650;Parent=gene-C9E93_RS02650;anticodon=(pos:complement(40385..40387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02650;product=tRNA-Ser NZ_PYJV01000022.1 tRNAscan-SE exon 40334 40421 . - . ID=exon-C9E93_RS02650-1;Parent=rna-C9E93_RS02650;anticodon=(pos:complement(40385..40387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02650;product=tRNA-Ser NZ_PYJV01000022.1 RefSeq gene 40815 41474 . + . ID=gene-C9E93_RS02655;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9E93_RS02655;old_locus_tag=C9E93_02765 NZ_PYJV01000022.1 Protein Homology CDS 40815 41474 . + 0 ID=cds-WP_000374046.1;Parent=gene-C9E93_RS02655;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9E93_RS02655;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 41561 41890 . + . ID=gene-C9E93_RS02660;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=C9E93_RS02660;old_locus_tag=C9E93_02770 NZ_PYJV01000022.1 Protein Homology CDS 41561 41890 . + 0 ID=cds-WP_000904449.1;Parent=gene-C9E93_RS02660;Dbxref=GenBank:WP_000904449.1;Name=WP_000904449.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9E93_RS02660;product=sulfurtransferase TusE;protein_id=WP_000904449.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 41887 42168 . - . ID=gene-C9E93_RS02665;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9E93_RS02665;old_locus_tag=C9E93_02775 NZ_PYJV01000022.1 Protein Homology CDS 41887 42168 . - 0 ID=cds-WP_000072884.1;Parent=gene-C9E93_RS02665;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9E93_RS02665;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 42217 42996 . - . ID=gene-C9E93_RS02670;Name=C9E93_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02670;old_locus_tag=C9E93_02780 NZ_PYJV01000022.1 Protein Homology CDS 42217 42996 . - 0 ID=cds-WP_000548082.1;Parent=gene-C9E93_RS02670;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9E93_RS02670;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 43022 43570 . - . ID=gene-C9E93_RS02675;Name=C9E93_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02675;old_locus_tag=C9E93_02785 NZ_PYJV01000022.1 Protein Homology CDS 43022 43570 . - 0 ID=cds-WP_000859416.1;Parent=gene-C9E93_RS02675;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9E93_RS02675;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 43785 44996 . + . ID=gene-C9E93_RS02680;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9E93_RS02680;old_locus_tag=C9E93_02790 NZ_PYJV01000022.1 Protein Homology CDS 43785 44996 . + 0 ID=cds-WP_000140480.1;Parent=gene-C9E93_RS02680;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9E93_RS02680;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 45054 45371 . + . ID=gene-C9E93_RS02685;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9E93_RS02685;old_locus_tag=C9E93_02795 NZ_PYJV01000022.1 Protein Homology CDS 45054 45371 . + 0 ID=cds-WP_000561983.1;Parent=gene-C9E93_RS02685;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9E93_RS02685;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 45416 45829 . - . ID=gene-C9E93_RS02690;Name=C9E93_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02690;old_locus_tag=C9E93_02800 NZ_PYJV01000022.1 Protein Homology CDS 45416 45829 . - 0 ID=cds-WP_001537782.1;Parent=gene-C9E93_RS02690;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9E93_RS02690;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 46003 46665 . + . ID=gene-C9E93_RS02695;Name=C9E93_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02695;old_locus_tag=C9E93_02805 NZ_PYJV01000022.1 Protein Homology CDS 46003 46665 . + 0 ID=cds-WP_023201783.1;Parent=gene-C9E93_RS02695;Dbxref=GenBank:WP_023201783.1;Name=WP_023201783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9E93_RS02695;product=DUF2057 family protein;protein_id=WP_023201783.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 46760 47218 . + . ID=gene-C9E93_RS02700;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9E93_RS02700;old_locus_tag=C9E93_02810 NZ_PYJV01000022.1 Protein Homology CDS 46760 47218 . + 0 ID=cds-WP_000424187.1;Parent=gene-C9E93_RS02700;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9E93_RS02700;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 47254 49308 . - . ID=gene-C9E93_RS02705;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9E93_RS02705;old_locus_tag=C9E93_02815 NZ_PYJV01000022.1 Protein Homology CDS 47254 49308 . - 0 ID=cds-WP_135370441.1;Parent=gene-C9E93_RS02705;Dbxref=GenBank:WP_135370441.1;Name=WP_135370441.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9E93_RS02705;product=DNA helicase IV;protein_id=WP_135370441.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 49432 49878 . + . ID=gene-C9E93_RS02710;Name=C9E93_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02710;old_locus_tag=C9E93_02820 NZ_PYJV01000022.1 Protein Homology CDS 49432 49878 . + 0 ID=cds-WP_001261222.1;Parent=gene-C9E93_RS02710;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9E93_RS02710;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 49897 52050 . + . ID=gene-C9E93_RS02715;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9E93_RS02715;old_locus_tag=C9E93_02825 NZ_PYJV01000022.1 Protein Homology CDS 49897 52050 . + 0 ID=cds-WP_001726973.1;Parent=gene-C9E93_RS02715;Dbxref=GenBank:WP_001726973.1;Name=WP_001726973.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9E93_RS02715;product=YccS family putative transporter;protein_id=WP_001726973.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 52037 52642 . - . ID=gene-C9E93_RS02720;Name=C9E93_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02720;old_locus_tag=C9E93_02830 NZ_PYJV01000022.1 Protein Homology CDS 52037 52642 . - 0 ID=cds-WP_001202375.1;Parent=gene-C9E93_RS02720;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9E93_RS02720;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 52859 53368 . + . ID=gene-C9E93_RS02725;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=C9E93_RS02725;old_locus_tag=C9E93_02835 NZ_PYJV01000022.1 Protein Homology CDS 52859 53368 . + 0 ID=cds-WP_000288732.1;Parent=gene-C9E93_RS02725;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9E93_RS02725;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 53725 54777 . + . ID=gene-C9E93_RS02730;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9E93_RS02730;old_locus_tag=C9E93_02840 NZ_PYJV01000022.1 Protein Homology CDS 53725 54777 . + 0 ID=cds-WP_023259507.1;Parent=gene-C9E93_RS02730;Dbxref=GenBank:WP_023259507.1;Name=WP_023259507.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9E93_RS02730;product=porin OmpA;protein_id=WP_023259507.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 54849 55301 . - . ID=gene-C9E93_RS02735;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=C9E93_RS02735;old_locus_tag=C9E93_02845 NZ_PYJV01000022.1 Protein Homology CDS 54849 55301 . - 0 ID=cds-WP_000877172.1;Parent=gene-C9E93_RS02735;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9E93_RS02735;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 55487 57247 . + . ID=gene-C9E93_RS02740;Name=C9E93_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02740;old_locus_tag=C9E93_02850 NZ_PYJV01000022.1 Protein Homology CDS 55487 57247 . + 0 ID=cds-WP_000156458.1;Parent=gene-C9E93_RS02740;Dbxref=GenBank:WP_000156458.1;Name=WP_000156458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9E93_RS02740;product=AAA family ATPase;protein_id=WP_000156458.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 57316 57834 . + . ID=gene-C9E93_RS02745;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9E93_RS02745;old_locus_tag=C9E93_02855 NZ_PYJV01000022.1 Protein Homology CDS 57316 57834 . + 0 ID=cds-WP_000227928.1;Parent=gene-C9E93_RS02745;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9E93_RS02745;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 57934 58101 . - . ID=gene-C9E93_RS02750;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9E93_RS02750;old_locus_tag=C9E93_02860 NZ_PYJV01000022.1 Protein Homology CDS 57934 58101 . - 0 ID=cds-WP_001537784.1;Parent=gene-C9E93_RS02750;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9E93_RS02750;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 58357 58920 . - . ID=gene-C9E93_RS02755;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9E93_RS02755;old_locus_tag=C9E93_02865 NZ_PYJV01000022.1 Protein Homology CDS 58357 58920 . - 0 ID=cds-WP_000759136.1;Parent=gene-C9E93_RS02755;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9E93_RS02755;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 58917 60557 . - . ID=gene-C9E93_RS02760;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9E93_RS02760;old_locus_tag=C9E93_02870 NZ_PYJV01000022.1 Protein Homology CDS 58917 60557 . - 0 ID=cds-WP_000433414.1;Parent=gene-C9E93_RS02760;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9E93_RS02760;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 60562 61815 . - . ID=gene-C9E93_RS02765;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=C9E93_RS02765;old_locus_tag=C9E93_02875 NZ_PYJV01000022.1 Protein Homology CDS 60562 61815 . - 0 ID=cds-WP_135370442.1;Parent=gene-C9E93_RS02765;Dbxref=GenBank:WP_135370442.1;Name=WP_135370442.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9E93_RS02765;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_135370442.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 61830 63737 . - . ID=gene-C9E93_RS02770;Name=C9E93_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02770;old_locus_tag=C9E93_02880 NZ_PYJV01000022.1 Protein Homology CDS 61830 63737 . - 0 ID=cds-WP_080083250.1;Parent=gene-C9E93_RS02770;Dbxref=GenBank:WP_080083250.1;Name=WP_080083250.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9E93_RS02770;product=ABC transporter ATP-binding protein;protein_id=WP_080083250.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 63750 65858 . - . ID=gene-C9E93_RS02775;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=C9E93_RS02775;old_locus_tag=C9E93_02885 NZ_PYJV01000022.1 Protein Homology CDS 63750 65858 . - 0 ID=cds-WP_001086485.1;Parent=gene-C9E93_RS02775;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9E93_RS02775;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 65957 67066 . + . ID=gene-C9E93_RS02780;Name=C9E93_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02780;old_locus_tag=C9E93_02890 NZ_PYJV01000022.1 Protein Homology CDS 65957 67066 . + 0 ID=cds-WP_061382952.1;Parent=gene-C9E93_RS02780;Dbxref=GenBank:WP_061382952.1;Name=WP_061382952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9E93_RS02780;product=YcbX family protein;protein_id=WP_061382952.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 67063 67605 . - . ID=gene-C9E93_RS02785;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9E93_RS02785;old_locus_tag=C9E93_02895 NZ_PYJV01000022.1 Protein Homology CDS 67063 67605 . - 0 ID=cds-WP_001220671.1;Parent=gene-C9E93_RS02785;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9E93_RS02785;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 67771 68781 . - . ID=gene-C9E93_RS02790;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9E93_RS02790;old_locus_tag=C9E93_02900 NZ_PYJV01000022.1 Protein Homology CDS 67771 68781 . - 0 ID=cds-WP_000291723.1;Parent=gene-C9E93_RS02790;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9E93_RS02790;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 68989 71601 . - . ID=gene-C9E93_RS02795;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9E93_RS02795;old_locus_tag=C9E93_02905 NZ_PYJV01000022.1 Protein Homology CDS 68989 71601 . - 0 ID=cds-WP_135370443.1;Parent=gene-C9E93_RS02795;Dbxref=GenBank:WP_135370443.1;Name=WP_135370443.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9E93_RS02795;product=aminopeptidase N;protein_id=WP_135370443.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 71868 73070 . + . ID=gene-C9E93_RS02800;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9E93_RS02800;old_locus_tag=C9E93_02910 NZ_PYJV01000022.1 Protein Homology CDS 71868 73070 . + 0 ID=cds-WP_135370444.1;Parent=gene-C9E93_RS02800;Dbxref=GenBank:WP_135370444.1;Name=WP_135370444.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9E93_RS02800;product=nicotinate phosphoribosyltransferase;protein_id=WP_135370444.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 73151 74584 . - . ID=gene-C9E93_RS02805;Name=C9E93_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02805;old_locus_tag=C9E93_02915 NZ_PYJV01000022.1 Protein Homology CDS 73151 74584 . - 0 ID=cds-WP_135370445.1;Parent=gene-C9E93_RS02805;Dbxref=GenBank:WP_135370445.1;Name=WP_135370445.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=C9E93_RS02805;product=alanine/glycine:cation symporter family protein;protein_id=WP_135370445.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 74830 76044 . - . ID=gene-C9E93_RS02810;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9E93_RS02810;old_locus_tag=C9E93_02920 NZ_PYJV01000022.1 Protein Homology CDS 74830 76044 . - 0 ID=cds-WP_000544852.1;Parent=gene-C9E93_RS02810;Dbxref=GenBank:WP_000544852.1;Name=WP_000544852.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9E93_RS02810;product=diaminopropionate ammonia-lyase;protein_id=WP_000544852.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 76361 76822 . + . ID=gene-C9E93_RS02820;Name=C9E93_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02820;old_locus_tag=C9E93_02930 NZ_PYJV01000022.1 Protein Homology CDS 76361 76822 . + 0 ID=cds-WP_135370446.1;Parent=gene-C9E93_RS02820;Dbxref=GenBank:WP_135370446.1;Name=WP_135370446.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9E93_RS02820;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_135370446.1;transl_table=11 NZ_PYJV01000022.1 RefSeq gene 77023 78423 . + . ID=gene-C9E93_RS02825;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9E93_RS02825;old_locus_tag=C9E93_02935 NZ_PYJV01000022.1 Protein Homology CDS 77023 78423 . + 0 ID=cds-WP_000117867.1;Parent=gene-C9E93_RS02825;Dbxref=GenBank:WP_000117867.1;Name=WP_000117867.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9E93_RS02825;product=asparagine--tRNA ligase;protein_id=WP_000117867.1;transl_table=11 ##sequence-region NZ_PYJV01000079.1 1 78261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000079.1 RefSeq region 1 78261 . + . ID=NZ_PYJV01000079.1:1..78261;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000079.1 RefSeq pseudogene 269 484 . + . ID=gene-C9E93_RS13525;Name=C9E93_RS13525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13525;old_locus_tag=C9E93_13870;partial=true;pseudo=true;start_range=.,269 NZ_PYJV01000079.1 Protein Homology CDS 269 484 . + 0 ID=cds-C9E93_RS13525;Parent=gene-C9E93_RS13525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791210.1;locus_tag=C9E93_RS13525;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,269;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 557 1084 . - . ID=gene-C9E93_RS13530;Name=C9E93_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13530;old_locus_tag=C9E93_13875 NZ_PYJV01000079.1 Protein Homology CDS 557 1084 . - 0 ID=cds-WP_000971649.1;Parent=gene-C9E93_RS13530;Dbxref=GenBank:WP_000971649.1;Name=WP_000971649.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9E93_RS13530;product=GNAT family N-acetyltransferase;protein_id=WP_000971649.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 1081 1371 . - . ID=gene-C9E93_RS13535;Name=C9E93_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13535;old_locus_tag=C9E93_13880 NZ_PYJV01000079.1 Protein Homology CDS 1081 1371 . - 0 ID=cds-WP_000855694.1;Parent=gene-C9E93_RS13535;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9E93_RS13535;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000855694.1;transl_table=11 NZ_PYJV01000079.1 RefSeq pseudogene 1641 1841 . - . ID=gene-C9E93_RS13540;Name=C9E93_RS13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13540;old_locus_tag=C9E93_13885;partial=true;pseudo=true;start_range=.,1641 NZ_PYJV01000079.1 Protein Homology CDS 1641 1841 . - 0 ID=cds-C9E93_RS13540;Parent=gene-C9E93_RS13540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9E93_RS13540;partial=true;product=transposase;pseudo=true;start_range=.,1641;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 2082 2408 . + . ID=gene-C9E93_RS13545;Name=C9E93_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13545;old_locus_tag=C9E93_13890 NZ_PYJV01000079.1 Protein Homology CDS 2082 2408 . + 0 ID=cds-WP_050067855.1;Parent=gene-C9E93_RS13545;Dbxref=GenBank:WP_050067855.1;Name=WP_050067855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E93_RS13545;product=hypothetical protein;protein_id=WP_050067855.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 2681 3028 . - . ID=gene-C9E93_RS13550;Name=C9E93_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13550;old_locus_tag=C9E93_13895 NZ_PYJV01000079.1 Protein Homology CDS 2681 3028 . - 0 ID=cds-WP_077946802.1;Parent=gene-C9E93_RS13550;Dbxref=GenBank:WP_077946802.1;Name=WP_077946802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9E93_RS13550;product=DUF1493 family protein;protein_id=WP_077946802.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 3013 3462 . - . ID=gene-C9E93_RS13555;Name=C9E93_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13555;old_locus_tag=C9E93_13900 NZ_PYJV01000079.1 Protein Homology CDS 3013 3462 . - 0 ID=cds-WP_023201504.1;Parent=gene-C9E93_RS13555;Dbxref=GenBank:WP_023201504.1;Name=WP_023201504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9E93_RS13555;product=STM2901 family protein;protein_id=WP_023201504.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 3894 4337 . - . ID=gene-C9E93_RS13560;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9E93_RS13560;old_locus_tag=C9E93_13905 NZ_PYJV01000079.1 Protein Homology CDS 3894 4337 . - 0 ID=cds-WP_000715096.1;Parent=gene-C9E93_RS13560;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9E93_RS13560;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 4793 5443 . + . ID=gene-C9E93_RS13565;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9E93_RS13565;old_locus_tag=C9E93_13910 NZ_PYJV01000079.1 Protein Homology CDS 4793 5443 . + 0 ID=cds-WP_001674874.1;Parent=gene-C9E93_RS13565;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9E93_RS13565;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 5440 7128 . + . ID=gene-C9E93_RS13570;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9E93_RS13570;old_locus_tag=C9E93_13915 NZ_PYJV01000079.1 Protein Homology CDS 5440 7128 . + 0 ID=cds-WP_000848102.1;Parent=gene-C9E93_RS13570;Dbxref=GenBank:WP_000848102.1;Name=WP_000848102.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9E93_RS13570;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848102.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 7125 8243 . + . ID=gene-C9E93_RS13575;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9E93_RS13575;old_locus_tag=C9E93_13920 NZ_PYJV01000079.1 Protein Homology CDS 7125 8243 . + 0 ID=cds-WP_000612171.1;Parent=gene-C9E93_RS13575;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9E93_RS13575;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 8268 10325 . + . ID=gene-C9E93_RS13580;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9E93_RS13580;old_locus_tag=C9E93_13925 NZ_PYJV01000079.1 Protein Homology CDS 8268 10325 . + 0 ID=cds-WP_000927219.1;Parent=gene-C9E93_RS13580;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9E93_RS13580;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 10349 10756 . + . ID=gene-C9E93_RS13585;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9E93_RS13585;old_locus_tag=C9E93_13930 NZ_PYJV01000079.1 Protein Homology CDS 10349 10756 . + 0 ID=cds-WP_001164066.1;Parent=gene-C9E93_RS13585;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9E93_RS13585;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 10753 12048 . + . ID=gene-C9E93_RS13590;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9E93_RS13590;old_locus_tag=C9E93_13935 NZ_PYJV01000079.1 Protein Homology CDS 10753 12048 . + 0 ID=cds-WP_045342102.1;Parent=gene-C9E93_RS13590;Dbxref=GenBank:WP_045342102.1;Name=WP_045342102.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9E93_RS13590;product=SctN family type III secretion system ATPase InvC;protein_id=WP_045342102.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 12026 12469 . + . ID=gene-C9E93_RS13595;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9E93_RS13595;old_locus_tag=C9E93_13940 NZ_PYJV01000079.1 Protein Homology CDS 12026 12469 . + 0 ID=cds-WP_080190138.1;Parent=gene-C9E93_RS13595;Dbxref=GenBank:WP_080190138.1;Name=WP_080190138.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9E93_RS13595;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_080190138.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 12469 13479 . + . ID=gene-C9E93_RS13600;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9E93_RS13600;old_locus_tag=C9E93_13945 NZ_PYJV01000079.1 Protein Homology CDS 12469 13479 . + 0 ID=cds-WP_135370170.1;Parent=gene-C9E93_RS13600;Dbxref=GenBank:WP_135370170.1;Name=WP_135370170.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9E93_RS13600;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_135370170.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 13479 14390 . + . ID=gene-C9E93_RS13605;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9E93_RS13605;old_locus_tag=C9E93_13950 NZ_PYJV01000079.1 Protein Homology CDS 13479 14390 . + 0 ID=cds-WP_000058734.1;Parent=gene-C9E93_RS13605;Dbxref=GenBank:WP_000058734.1;Name=WP_000058734.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9E93_RS13605;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058734.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 14380 15054 . + . ID=gene-C9E93_RS13610;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9E93_RS13610;old_locus_tag=C9E93_13955 NZ_PYJV01000079.1 Protein Homology CDS 14380 15054 . + 0 ID=cds-WP_000526016.1;Parent=gene-C9E93_RS13610;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9E93_RS13610;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 15080 15340 . + . ID=gene-C9E93_RS13615;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9E93_RS13615;old_locus_tag=C9E93_13960 NZ_PYJV01000079.1 Protein Homology CDS 15080 15340 . + 0 ID=cds-WP_000342503.1;Parent=gene-C9E93_RS13615;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9E93_RS13615;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 15344 16135 . + . ID=gene-C9E93_RS13620;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9E93_RS13620;old_locus_tag=C9E93_13965 NZ_PYJV01000079.1 Protein Homology CDS 15344 16135 . + 0 ID=cds-WP_000498965.1;Parent=gene-C9E93_RS13620;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9E93_RS13620;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 16122 17192 . + . ID=gene-C9E93_RS13625;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9E93_RS13625;old_locus_tag=C9E93_13970 NZ_PYJV01000079.1 Protein Homology CDS 16122 17192 . + 0 ID=cds-WP_000097719.1;Parent=gene-C9E93_RS13625;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9E93_RS13625;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 17330 17827 . + . ID=gene-C9E93_RS13630;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9E93_RS13630;old_locus_tag=C9E93_13975 NZ_PYJV01000079.1 Protein Homology CDS 17330 17827 . + 0 ID=cds-WP_000386309.1;Parent=gene-C9E93_RS13630;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9E93_RS13630;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 17830 19611 . + . ID=gene-C9E93_RS13635;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9E93_RS13635;old_locus_tag=C9E93_13980 NZ_PYJV01000079.1 Protein Homology CDS 17830 19611 . + 0 ID=cds-WP_000245782.1;Parent=gene-C9E93_RS13635;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9E93_RS13635;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 19639 20868 . + . ID=gene-C9E93_RS13640;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9E93_RS13640;old_locus_tag=C9E93_13985 NZ_PYJV01000079.1 Protein Homology CDS 19639 20868 . + 0 ID=cds-WP_000909019.1;Parent=gene-C9E93_RS13640;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9E93_RS13640;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 20939 21970 . + . ID=gene-C9E93_RS13645;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9E93_RS13645;old_locus_tag=C9E93_13990 NZ_PYJV01000079.1 Protein Homology CDS 20939 21970 . + 0 ID=cds-WP_135370398.1;Parent=gene-C9E93_RS13645;Dbxref=GenBank:WP_135370398.1;Name=WP_135370398.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9E93_RS13645;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_135370398.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 21989 24046 . + . ID=gene-C9E93_RS13650;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9E93_RS13650;old_locus_tag=C9E93_13995 NZ_PYJV01000079.1 Protein Homology CDS 21989 24046 . + 0 ID=cds-WP_135370399.1;Parent=gene-C9E93_RS13650;Dbxref=GenBank:WP_135370399.1;Name=WP_135370399.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9E93_RS13650;product=SPI-1 type III secretion system effector SipA;protein_id=WP_135370399.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 24065 24313 . + . ID=gene-C9E93_RS13655;Name=C9E93_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13655;old_locus_tag=C9E93_14000 NZ_PYJV01000079.1 Protein Homology CDS 24065 24313 . + 0 ID=cds-WP_023227559.1;Parent=gene-C9E93_RS13655;Dbxref=GenBank:WP_023227559.1;Name=WP_023227559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055583.1;locus_tag=C9E93_RS13655;product=acyl carrier protein;protein_id=WP_023227559.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 24357 24617 . + . ID=gene-C9E93_RS13660;Name=C9E93_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13660;old_locus_tag=C9E93_14005 NZ_PYJV01000079.1 Protein Homology CDS 24357 24617 . + 0 ID=cds-WP_000692250.1;Parent=gene-C9E93_RS13660;Dbxref=GenBank:WP_000692250.1;Name=WP_000692250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9E93_RS13660;product=hypothetical protein;protein_id=WP_000692250.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 24644 25036 . + . ID=gene-C9E93_RS13665;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9E93_RS13665;old_locus_tag=C9E93_14010 NZ_PYJV01000079.1 Protein Homology CDS 24644 25036 . + 0 ID=cds-WP_001748715.1;Parent=gene-C9E93_RS13665;Dbxref=GenBank:WP_001748715.1;Name=WP_001748715.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9E93_RS13665;product=chaperone SicP;protein_id=WP_001748715.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 25023 26654 . + . ID=gene-C9E93_RS13670;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9E93_RS13670;old_locus_tag=C9E93_14015 NZ_PYJV01000079.1 Protein Homology CDS 25023 26654 . + 0 ID=cds-WP_135370400.1;Parent=gene-C9E93_RS13670;Dbxref=GenBank:WP_135370400.1;Name=WP_135370400.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9E93_RS13670;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_135370400.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 26708 27190 . - . ID=gene-C9E93_RS13675;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9E93_RS13675;old_locus_tag=C9E93_14020 NZ_PYJV01000079.1 Protein Homology CDS 26708 27190 . - 0 ID=cds-WP_000558930.1;Parent=gene-C9E93_RS13675;Dbxref=GenBank:WP_000558930.1;Name=WP_000558930.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9E93_RS13675;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558930.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 27208 28869 . - . ID=gene-C9E93_RS13680;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9E93_RS13680;old_locus_tag=C9E93_14025 NZ_PYJV01000079.1 Protein Homology CDS 27208 28869 . - 0 ID=cds-WP_001120085.1;Parent=gene-C9E93_RS13680;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9E93_RS13680;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 29958 30887 . - . ID=gene-C9E93_RS13685;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9E93_RS13685;old_locus_tag=C9E93_14030 NZ_PYJV01000079.1 Protein Homology CDS 29958 30887 . - 0 ID=cds-WP_000432702.1;Parent=gene-C9E93_RS13685;Dbxref=GenBank:WP_000432702.1;Name=WP_000432702.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9E93_RS13685;product=transcriptional regulator HilD;protein_id=WP_000432702.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 31203 32381 . + . ID=gene-C9E93_RS13690;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9E93_RS13690;old_locus_tag=C9E93_14035 NZ_PYJV01000079.1 Protein Homology CDS 31203 32381 . + 0 ID=cds-WP_135370401.1;Parent=gene-C9E93_RS13690;Dbxref=GenBank:WP_135370401.1;Name=WP_135370401.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9E93_RS13690;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_135370401.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 32406 32648 . + . ID=gene-C9E93_RS13695;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9E93_RS13695;old_locus_tag=C9E93_14040 NZ_PYJV01000079.1 Protein Homology CDS 32406 32648 . + 0 ID=cds-WP_000235229.1;Parent=gene-C9E93_RS13695;Dbxref=GenBank:WP_000235229.1;Name=WP_000235229.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9E93_RS13695;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235229.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 32667 32972 . + . ID=gene-C9E93_RS13700;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9E93_RS13700;old_locus_tag=C9E93_14045 NZ_PYJV01000079.1 Protein Homology CDS 32667 32972 . + 0 ID=cds-WP_000020431.1;Parent=gene-C9E93_RS13700;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9E93_RS13700;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 32969 33727 . + . ID=gene-C9E93_RS13705;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9E93_RS13705;old_locus_tag=C9E93_14050 NZ_PYJV01000079.1 Protein Homology CDS 32969 33727 . + 0 ID=cds-WP_000621238.1;Parent=gene-C9E93_RS13705;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9E93_RS13705;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 33699 34298 . + . ID=gene-C9E93_RS13710;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9E93_RS13710;old_locus_tag=C9E93_14055 NZ_PYJV01000079.1 Protein Homology CDS 33699 34298 . + 0 ID=cds-WP_001591231.1;Parent=gene-C9E93_RS13710;Dbxref=GenBank:WP_001591231.1;Name=WP_001591231.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9E93_RS13710;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001591231.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 34255 34926 . + . ID=gene-C9E93_RS13715;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9E93_RS13715;old_locus_tag=C9E93_14060 NZ_PYJV01000079.1 Protein Homology CDS 34255 34926 . + 0 ID=cds-WP_000916655.1;Parent=gene-C9E93_RS13715;Dbxref=GenBank:WP_000916655.1;Name=WP_000916655.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=C9E93_RS13715;product=type III secretion system linker protein OrgB;protein_id=WP_000916655.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 34942 35394 . + . ID=gene-C9E93_RS13720;Name=C9E93_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13720;old_locus_tag=C9E93_14065 NZ_PYJV01000079.1 Protein Homology CDS 34942 35394 . + 0 ID=cds-WP_000612184.1;Parent=gene-C9E93_RS13720;Dbxref=GenBank:WP_000612184.1;Name=WP_000612184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9E93_RS13720;product=type III secretion system effector protein OrgC;protein_id=WP_000612184.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 35739 36626 . + . ID=gene-C9E93_RS13725;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9E93_RS13725;old_locus_tag=C9E93_14070 NZ_PYJV01000079.1 Protein Homology CDS 35739 36626 . + 0 ID=cds-WP_000243998.1;Parent=gene-C9E93_RS13725;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9E93_RS13725;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 37010 37765 . + . ID=gene-C9E93_RS13730;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9E93_RS13730;old_locus_tag=C9E93_14080 NZ_PYJV01000079.1 Protein Homology CDS 37010 37765 . + 0 ID=cds-WP_017441148.1;Parent=gene-C9E93_RS13730;Dbxref=GenBank:WP_017441148.1;Name=WP_017441148.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9E93_RS13730;product=transcriptional regulator SprB;protein_id=WP_017441148.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 37926 38834 . + . ID=gene-C9E93_RS13735;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=C9E93_RS13735;old_locus_tag=C9E93_14085 NZ_PYJV01000079.1 Protein Homology CDS 37926 38834 . + 0 ID=cds-WP_077905364.1;Parent=gene-C9E93_RS13735;Dbxref=GenBank:WP_077905364.1;Name=WP_077905364.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=C9E93_RS13735;product=type III secretion system YopJ family effector AvrA;protein_id=WP_077905364.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 38933 39781 . - . ID=gene-C9E93_RS13740;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9E93_RS13740;old_locus_tag=C9E93_14090 NZ_PYJV01000079.1 Protein Homology CDS 38933 39781 . - 0 ID=cds-WP_000480209.1;Parent=gene-C9E93_RS13740;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9E93_RS13740;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 39772 40632 . - . ID=gene-C9E93_RS13745;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9E93_RS13745;old_locus_tag=C9E93_14095 NZ_PYJV01000079.1 Protein Homology CDS 39772 40632 . - 0 ID=cds-WP_001104336.1;Parent=gene-C9E93_RS13745;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9E93_RS13745;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 40629 41450 . - . ID=gene-C9E93_RS13750;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9E93_RS13750;old_locus_tag=C9E93_14100 NZ_PYJV01000079.1 Protein Homology CDS 40629 41450 . - 0 ID=cds-WP_000083153.1;Parent=gene-C9E93_RS13750;Dbxref=GenBank:WP_000083153.1;Name=WP_000083153.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9E93_RS13750;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083153.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 41447 42364 . - . ID=gene-C9E93_RS13755;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9E93_RS13755;old_locus_tag=C9E93_14105 NZ_PYJV01000079.1 Protein Homology CDS 41447 42364 . - 0 ID=cds-WP_000182930.1;Parent=gene-C9E93_RS13755;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9E93_RS13755;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 42546 42890 . + . ID=gene-C9E93_RS13760;Name=C9E93_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13760;old_locus_tag=C9E93_14110 NZ_PYJV01000079.1 Protein Homology CDS 42546 42890 . + 0 ID=cds-WP_045901655.1;Parent=gene-C9E93_RS13760;Dbxref=GenBank:WP_045901655.1;Name=WP_045901655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9E93_RS13760;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_045901655.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 42952 45030 . - . ID=gene-C9E93_RS13765;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E93_RS13765;old_locus_tag=C9E93_14115 NZ_PYJV01000079.1 Protein Homology CDS 42952 45030 . - 0 ID=cds-WP_000122692.1;Parent=gene-C9E93_RS13765;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9E93_RS13765;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 45249 46259 . - . ID=gene-C9E93_RS13770;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9E93_RS13770;old_locus_tag=C9E93_14120 NZ_PYJV01000079.1 Protein Homology CDS 45249 46259 . - 0 ID=cds-WP_001059962.1;Parent=gene-C9E93_RS13770;Dbxref=GenBank:WP_001059962.1;Name=WP_001059962.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9E93_RS13770;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059962.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 46256 47377 . - . ID=gene-C9E93_RS13775;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9E93_RS13775;old_locus_tag=C9E93_14125 NZ_PYJV01000079.1 Protein Homology CDS 46256 47377 . - 0 ID=cds-WP_001212958.1;Parent=gene-C9E93_RS13775;Dbxref=GenBank:WP_001212958.1;Name=WP_001212958.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9E93_RS13775;product=hydrogenase formation protein HypD;protein_id=WP_001212958.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 47377 47649 . - . ID=gene-C9E93_RS13780;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E93_RS13780;old_locus_tag=C9E93_14130 NZ_PYJV01000079.1 Protein Homology CDS 47377 47649 . - 0 ID=cds-WP_000334871.1;Parent=gene-C9E93_RS13780;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9E93_RS13780;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 47640 48512 . - . ID=gene-C9E93_RS13785;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9E93_RS13785;old_locus_tag=C9E93_14135 NZ_PYJV01000079.1 Protein Homology CDS 47640 48512 . - 0 ID=cds-WP_000337636.1;Parent=gene-C9E93_RS13785;Dbxref=GenBank:WP_000337636.1;Name=WP_000337636.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9E93_RS13785;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337636.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 48581 48937 . - . ID=gene-C9E93_RS13790;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E93_RS13790;old_locus_tag=C9E93_14140 NZ_PYJV01000079.1 Protein Homology CDS 48581 48937 . - 0 ID=cds-WP_000544461.1;Parent=gene-C9E93_RS13790;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9E93_RS13790;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 49147 49608 . + . ID=gene-C9E93_RS13800;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9E93_RS13800;old_locus_tag=C9E93_14150 NZ_PYJV01000079.1 Protein Homology CDS 49147 49608 . + 0 ID=cds-WP_000158075.1;Parent=gene-C9E93_RS13800;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9E93_RS13800;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 49754 50362 . + . ID=gene-C9E93_RS13805;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=C9E93_RS13805;old_locus_tag=C9E93_14155 NZ_PYJV01000079.1 Protein Homology CDS 49754 50362 . + 0 ID=cds-WP_001079164.1;Parent=gene-C9E93_RS13805;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9E93_RS13805;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 50362 52188 . + . ID=gene-C9E93_RS13810;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9E93_RS13810;old_locus_tag=C9E93_14160 NZ_PYJV01000079.1 Protein Homology CDS 50362 52188 . + 0 ID=cds-WP_114064068.1;Parent=gene-C9E93_RS13810;Dbxref=GenBank:WP_114064068.1;Name=WP_114064068.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9E93_RS13810;product=formate hydrogenlyase subunit 3;protein_id=WP_114064068.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 52191 53114 . + . ID=gene-C9E93_RS13815;Name=C9E93_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13815;old_locus_tag=C9E93_14165 NZ_PYJV01000079.1 Protein Homology CDS 52191 53114 . + 0 ID=cds-WP_000110563.1;Parent=gene-C9E93_RS13815;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9E93_RS13815;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 53132 54841 . + . ID=gene-C9E93_RS13820;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9E93_RS13820;old_locus_tag=C9E93_14170 NZ_PYJV01000079.1 Protein Homology CDS 53132 54841 . + 0 ID=cds-WP_001288155.1;Parent=gene-C9E93_RS13820;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9E93_RS13820;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 54851 55393 . + . ID=gene-C9E93_RS13825;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9E93_RS13825;old_locus_tag=C9E93_14175 NZ_PYJV01000079.1 Protein Homology CDS 54851 55393 . + 0 ID=cds-WP_000493767.1;Parent=gene-C9E93_RS13825;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9E93_RS13825;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 55393 56160 . + . ID=gene-C9E93_RS13830;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9E93_RS13830;old_locus_tag=C9E93_14180 NZ_PYJV01000079.1 Protein Homology CDS 55393 56160 . + 0 ID=cds-WP_000067419.1;Parent=gene-C9E93_RS13830;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9E93_RS13830;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 56157 56567 . + . ID=gene-C9E93_RS13835;Name=C9E93_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13835;old_locus_tag=C9E93_14185 NZ_PYJV01000079.1 Protein Homology CDS 56157 56567 . + 0 ID=cds-WP_000003725.1;Parent=gene-C9E93_RS13835;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9E93_RS13835;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 56560 57030 . + . ID=gene-C9E93_RS13840;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9E93_RS13840;old_locus_tag=C9E93_14190 NZ_PYJV01000079.1 Protein Homology CDS 56560 57030 . + 0 ID=cds-WP_000132992.1;Parent=gene-C9E93_RS13840;Dbxref=GenBank:WP_000132992.1;Name=WP_000132992.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9E93_RS13840;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132992.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 57057 57866 . + . ID=gene-C9E93_RS13845;Name=C9E93_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13845;old_locus_tag=C9E93_14195 NZ_PYJV01000079.1 Protein Homology CDS 57057 57866 . + 0 ID=cds-WP_023244857.1;Parent=gene-C9E93_RS13845;Dbxref=GenBank:WP_023244857.1;Name=WP_023244857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9E93_RS13845;product=hypothetical protein;protein_id=WP_023244857.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 58067 58612 . + . ID=gene-C9E93_RS13850;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9E93_RS13850;old_locus_tag=C9E93_14200 NZ_PYJV01000079.1 Protein Homology CDS 58067 58612 . + 0 ID=cds-WP_001078791.1;Parent=gene-C9E93_RS13850;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9E93_RS13850;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 58758 60998 . + . ID=gene-C9E93_RS13855;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9E93_RS13855;old_locus_tag=C9E93_14205 NZ_PYJV01000079.1 Protein Homology CDS 58758 60998 . + 0 ID=cds-WP_114064069.1;Parent=gene-C9E93_RS13855;Dbxref=GenBank:WP_114064069.1;Name=WP_114064069.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9E93_RS13855;product=carbamoyltransferase HypF;protein_id=WP_114064069.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 61095 62228 . - . ID=gene-C9E93_RS13860;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9E93_RS13860;old_locus_tag=C9E93_14210 NZ_PYJV01000079.1 Protein Homology CDS 61095 62228 . - 0 ID=cds-WP_001748723.1;Parent=gene-C9E93_RS13860;Dbxref=GenBank:WP_001748723.1;Name=WP_001748723.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9E93_RS13860;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_001748723.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 62225 63664 . - . ID=gene-C9E93_RS13865;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9E93_RS13865;old_locus_tag=C9E93_14215 NZ_PYJV01000079.1 Protein Homology CDS 62225 63664 . - 0 ID=cds-WP_000026012.1;Parent=gene-C9E93_RS13865;Dbxref=GenBank:WP_000026012.1;Name=WP_000026012.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9E93_RS13865;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026012.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 63850 65370 . + . ID=gene-C9E93_RS13870;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9E93_RS13870;old_locus_tag=C9E93_14220 NZ_PYJV01000079.1 Protein Homology CDS 63850 65370 . + 0 ID=cds-WP_114064070.1;Parent=gene-C9E93_RS13870;Dbxref=GenBank:WP_114064070.1;Name=WP_114064070.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9E93_RS13870;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_114064070.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 65367 66332 . - . ID=gene-C9E93_RS13875;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=C9E93_RS13875;old_locus_tag=C9E93_14225 NZ_PYJV01000079.1 Protein Homology CDS 65367 66332 . - 0 ID=cds-WP_001278201.1;Parent=gene-C9E93_RS13875;Dbxref=GenBank:WP_001278201.1;Name=WP_001278201.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9E93_RS13875;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278201.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 66325 67098 . - . ID=gene-C9E93_RS13880;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9E93_RS13880;old_locus_tag=C9E93_14230 NZ_PYJV01000079.1 Protein Homology CDS 66325 67098 . - 0 ID=cds-WP_000804536.1;Parent=gene-C9E93_RS13880;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9E93_RS13880;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 67296 67655 . - . ID=gene-C9E93_RS13885;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9E93_RS13885;old_locus_tag=C9E93_14235 NZ_PYJV01000079.1 Protein Homology CDS 67296 67655 . - 0 ID=cds-WP_000255198.1;Parent=gene-C9E93_RS13885;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9E93_RS13885;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 67732 68511 . - . ID=gene-C9E93_RS13890;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9E93_RS13890;old_locus_tag=C9E93_14240 NZ_PYJV01000079.1 Protein Homology CDS 67732 68511 . - 0 ID=cds-WP_001077372.1;Parent=gene-C9E93_RS13890;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9E93_RS13890;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 68523 68885 . - . ID=gene-C9E93_RS13895;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=C9E93_RS13895;old_locus_tag=C9E93_14245 NZ_PYJV01000079.1 Protein Homology CDS 68523 68885 . - 0 ID=cds-WP_000111555.1;Parent=gene-C9E93_RS13895;Dbxref=GenBank:WP_000111555.1;Name=WP_000111555.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9E93_RS13895;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111555.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 68897 69868 . - . ID=gene-C9E93_RS13900;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9E93_RS13900;old_locus_tag=C9E93_14250 NZ_PYJV01000079.1 Protein Homology CDS 68897 69868 . - 0 ID=cds-WP_000199033.1;Parent=gene-C9E93_RS13900;Dbxref=GenBank:WP_000199033.1;Name=WP_000199033.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9E93_RS13900;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199033.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 69865 70428 . - . ID=gene-C9E93_RS13905;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9E93_RS13905;old_locus_tag=C9E93_14255 NZ_PYJV01000079.1 Protein Homology CDS 69865 70428 . - 0 ID=cds-WP_000573335.1;Parent=gene-C9E93_RS13905;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9E93_RS13905;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 70682 71761 . + . ID=gene-C9E93_RS13910;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9E93_RS13910;old_locus_tag=C9E93_14260 NZ_PYJV01000079.1 Protein Homology CDS 70682 71761 . + 0 ID=cds-WP_135370402.1;Parent=gene-C9E93_RS13910;Dbxref=GenBank:WP_135370402.1;Name=WP_135370402.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9E93_RS13910;product=lytic murein transglycosylase B;protein_id=WP_135370402.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 71798 72043 . - . ID=gene-C9E93_RS23950;Name=C9E93_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23950;old_locus_tag=C9E93_14265 NZ_PYJV01000079.1 Protein Homology CDS 71798 72043 . - 0 ID=cds-WP_021000688.1;Parent=gene-C9E93_RS23950;Dbxref=GenBank:WP_021000688.1;Name=WP_021000688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9E93_RS23950;product=hypothetical protein;protein_id=WP_021000688.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 72239 72736 . + . ID=gene-C9E93_RS13920;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9E93_RS13920;old_locus_tag=C9E93_14270 NZ_PYJV01000079.1 Protein Homology CDS 72239 72736 . + 0 ID=cds-WP_000132239.1;Parent=gene-C9E93_RS13920;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9E93_RS13920;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 72821 73882 . + . ID=gene-C9E93_RS13925;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9E93_RS13925;old_locus_tag=C9E93_14275 NZ_PYJV01000079.1 Protein Homology CDS 72821 73882 . + 0 ID=cds-WP_000963152.1;Parent=gene-C9E93_RS13925;Dbxref=GenBank:WP_000963152.1;Name=WP_000963152.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9E93_RS13925;product=recombinase RecA;protein_id=WP_000963152.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 73998 74498 . + . ID=gene-C9E93_RS13930;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9E93_RS13930;old_locus_tag=C9E93_14280 NZ_PYJV01000079.1 Protein Homology CDS 73998 74498 . + 0 ID=cds-WP_001294863.1;Parent=gene-C9E93_RS13930;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9E93_RS13930;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 74734 77364 . + . ID=gene-C9E93_RS13940;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9E93_RS13940;old_locus_tag=C9E93_14290 NZ_PYJV01000079.1 Protein Homology CDS 74734 77364 . + 0 ID=cds-WP_135370403.1;Parent=gene-C9E93_RS13940;Dbxref=GenBank:WP_135370403.1;Name=WP_135370403.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9E93_RS13940;product=alanine--tRNA ligase;protein_id=WP_135370403.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 77599 77784 . + . ID=gene-C9E93_RS13945;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9E93_RS13945;old_locus_tag=C9E93_14295 NZ_PYJV01000079.1 Protein Homology CDS 77599 77784 . + 0 ID=cds-WP_000906486.1;Parent=gene-C9E93_RS13945;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9E93_RS13945;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_PYJV01000079.1 RefSeq gene 78088 78180 . + . ID=gene-C9E93_RS13950;Name=C9E93_RS13950;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13950;old_locus_tag=C9E93_14305 NZ_PYJV01000079.1 tRNAscan-SE tRNA 78088 78180 . + . ID=rna-C9E93_RS13950;Parent=gene-C9E93_RS13950;anticodon=(pos:78122..78124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13950;product=tRNA-Ser NZ_PYJV01000079.1 tRNAscan-SE exon 78088 78180 . + . ID=exon-C9E93_RS13950-1;Parent=rna-C9E93_RS13950;anticodon=(pos:78122..78124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13950;product=tRNA-Ser NZ_PYJV01000079.1 RefSeq gene 78184 78260 . + . ID=gene-C9E93_RS13955;Name=C9E93_RS13955;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13955;old_locus_tag=C9E93_14310 NZ_PYJV01000079.1 tRNAscan-SE tRNA 78184 78260 . + . ID=rna-C9E93_RS13955;Parent=gene-C9E93_RS13955;anticodon=(pos:78218..78220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13955;product=tRNA-Arg NZ_PYJV01000079.1 tRNAscan-SE exon 78184 78260 . + . ID=exon-C9E93_RS13955-1;Parent=rna-C9E93_RS13955;anticodon=(pos:78218..78220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13955;product=tRNA-Arg ##sequence-region NZ_PYJV01000099.1 1 76720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000099.1 RefSeq region 1 76720 . + . ID=NZ_PYJV01000099.1:1..76720;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000099.1 RefSeq pseudogene 755 1108 . - . ID=gene-C9E93_RS17940;Name=C9E93_RS17940;end_range=1108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS17940;old_locus_tag=C9E93_18405;partial=true;pseudo=true NZ_PYJV01000099.1 Protein Homology CDS 755 1108 . - 0 ID=cds-C9E93_RS17940;Parent=gene-C9E93_RS17940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=1108,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9E93_RS17940;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 1369 3669 . + . ID=gene-C9E93_RS17950;Name=C9E93_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17950;old_locus_tag=C9E93_18415 NZ_PYJV01000099.1 Protein Homology CDS 1369 3669 . + 0 ID=cds-WP_135370454.1;Parent=gene-C9E93_RS17950;Dbxref=GenBank:WP_135370454.1;Name=WP_135370454.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052938253.1;locus_tag=C9E93_RS17950;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_135370454.1;transl_table=11 NZ_PYJV01000099.1 RefSeq pseudogene 3703 3801 . + . ID=gene-C9E93_RS24210;Name=C9E93_RS24210;end_range=3801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24210;old_locus_tag=C9E93_18420;partial=true;pseudo=true;start_range=.,3703 NZ_PYJV01000099.1 Protein Homology CDS 3703 3801 . + 0 ID=cds-C9E93_RS24210;Parent=gene-C9E93_RS24210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E93_RS24210;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,3703;transl_table=11 NZ_PYJV01000099.1 RefSeq pseudogene 3811 4343 . + . ID=gene-C9E93_RS17960;Name=C9E93_RS17960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS17960;old_locus_tag=C9E93_18425;partial=true;pseudo=true;start_range=.,3811 NZ_PYJV01000099.1 Protein Homology CDS 3811 4343 . + 0 ID=cds-C9E93_RS17960;Parent=gene-C9E93_RS17960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E93_RS17960;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3811;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 4486 4626 . - . ID=gene-C9E93_RS17965;Name=C9E93_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17965;old_locus_tag=C9E93_18430 NZ_PYJV01000099.1 Protein Homology CDS 4486 4626 . - 0 ID=cds-WP_001576018.1;Parent=gene-C9E93_RS17965;Dbxref=GenBank:WP_001576018.1;Name=WP_001576018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9E93_RS17965;product=hypothetical protein;protein_id=WP_001576018.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 4792 5061 . - . ID=gene-C9E93_RS17970;Name=C9E93_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17970;old_locus_tag=C9E93_18435 NZ_PYJV01000099.1 Protein Homology CDS 4792 5061 . - 0 ID=cds-WP_077248370.1;Parent=gene-C9E93_RS17970;Dbxref=GenBank:WP_077248370.1;Name=WP_077248370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9E93_RS17970;product=hypothetical protein;protein_id=WP_077248370.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 5430 5849 . + . ID=gene-C9E93_RS17980;Name=C9E93_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17980;old_locus_tag=C9E93_18445 NZ_PYJV01000099.1 Protein Homology CDS 5430 5849 . + 0 ID=cds-WP_000354404.1;Parent=gene-C9E93_RS17980;Dbxref=GenBank:WP_000354404.1;Name=WP_000354404.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9E93_RS17980;product=GNAT family N-acetyltransferase;protein_id=WP_000354404.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 6237 6713 . - . ID=gene-C9E93_RS17985;Name=C9E93_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17985;old_locus_tag=C9E93_18450 NZ_PYJV01000099.1 Protein Homology CDS 6237 6713 . - 0 ID=cds-WP_135370453.1;Parent=gene-C9E93_RS17985;Dbxref=GenBank:WP_135370453.1;Name=WP_135370453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9E93_RS17985;product=hypothetical protein;protein_id=WP_135370453.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 7041 7436 . - . ID=gene-C9E93_RS17990;Name=C9E93_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17990;old_locus_tag=C9E93_18455 NZ_PYJV01000099.1 Protein Homology CDS 7041 7436 . - 0 ID=cds-WP_000422887.1;Parent=gene-C9E93_RS17990;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9E93_RS17990;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 8121 8843 . + . ID=gene-C9E93_RS17995;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9E93_RS17995;old_locus_tag=C9E93_18460 NZ_PYJV01000099.1 Protein Homology CDS 8121 8843 . + 0 ID=cds-WP_023223000.1;Parent=gene-C9E93_RS17995;Dbxref=GenBank:WP_023223000.1;Name=WP_023223000.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9E93_RS17995;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_023223000.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 9128 9292 . + . ID=gene-C9E93_RS18000;Name=C9E93_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18000;old_locus_tag=C9E93_18465 NZ_PYJV01000099.1 Protein Homology CDS 9128 9292 . + 0 ID=cds-WP_001134853.1;Parent=gene-C9E93_RS18000;Dbxref=GenBank:WP_001134853.1;Name=WP_001134853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9E93_RS18000;product=hypothetical protein;protein_id=WP_001134853.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 9283 9498 . + . ID=gene-C9E93_RS24095;Name=C9E93_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24095 NZ_PYJV01000099.1 Protein Homology CDS 9283 9498 . + 0 ID=cds-WP_024132346.1;Parent=gene-C9E93_RS24095;Dbxref=GenBank:WP_024132346.1;Name=WP_024132346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764306.1;locus_tag=C9E93_RS24095;product=hypothetical protein;protein_id=WP_024132346.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 9516 10166 . + . ID=gene-C9E93_RS18005;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9E93_RS18005;old_locus_tag=C9E93_18470 NZ_PYJV01000099.1 Protein Homology CDS 9516 10166 . + 0 ID=cds-WP_135370452.1;Parent=gene-C9E93_RS18005;Dbxref=GenBank:WP_135370452.1;Name=WP_135370452.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9E93_RS18005;product=protein-serine/threonine phosphatase;protein_id=WP_135370452.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 10185 10376 . - . ID=gene-C9E93_RS18010;Name=C9E93_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18010;old_locus_tag=C9E93_18475 NZ_PYJV01000099.1 Protein Homology CDS 10185 10376 . - 0 ID=cds-WP_000457838.1;Parent=gene-C9E93_RS18010;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9E93_RS18010;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 10487 10723 . - . ID=gene-C9E93_RS18015;Name=C9E93_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18015;old_locus_tag=C9E93_18480 NZ_PYJV01000099.1 Protein Homology CDS 10487 10723 . - 0 ID=cds-WP_024131108.1;Parent=gene-C9E93_RS18015;Dbxref=GenBank:WP_024131108.1;Name=WP_024131108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9E93_RS18015;product=YebV family protein;protein_id=WP_024131108.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 10841 12280 . - . ID=gene-C9E93_RS18020;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9E93_RS18020;old_locus_tag=C9E93_18485 NZ_PYJV01000099.1 Protein Homology CDS 10841 12280 . - 0 ID=cds-WP_135370451.1;Parent=gene-C9E93_RS18020;Dbxref=GenBank:WP_135370451.1;Name=WP_135370451.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9E93_RS18020;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_135370451.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 12358 14991 . - . ID=gene-C9E93_RS18025;Name=C9E93_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18025;old_locus_tag=C9E93_18490 NZ_PYJV01000099.1 Protein Homology CDS 12358 14991 . - 0 ID=cds-WP_001529852.1;Parent=gene-C9E93_RS18025;Dbxref=GenBank:WP_001529852.1;Name=WP_001529852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9E93_RS18025;product=PqiB family protein;protein_id=WP_001529852.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 14960 16243 . - . ID=gene-C9E93_RS18030;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9E93_RS18030;old_locus_tag=C9E93_18495 NZ_PYJV01000099.1 Protein Homology CDS 14960 16243 . - 0 ID=cds-WP_079826734.1;Parent=gene-C9E93_RS18030;Dbxref=GenBank:WP_079826734.1;Name=WP_079826734.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9E93_RS18030;product=membrane integrity lipid transport subunit YebS;protein_id=WP_079826734.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 16372 16869 . + . ID=gene-C9E93_RS18035;Name=C9E93_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18035;old_locus_tag=C9E93_18500 NZ_PYJV01000099.1 Protein Homology CDS 16372 16869 . + 0 ID=cds-WP_001518229.1;Parent=gene-C9E93_RS18035;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9E93_RS18035;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 16967 17653 . + . ID=gene-C9E93_RS18040;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9E93_RS18040;old_locus_tag=C9E93_18505 NZ_PYJV01000099.1 Protein Homology CDS 16967 17653 . + 0 ID=cds-WP_000431401.1;Parent=gene-C9E93_RS18040;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9E93_RS18040;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 17673 19721 . + . ID=gene-C9E93_RS18045;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=C9E93_RS18045;old_locus_tag=C9E93_18510 NZ_PYJV01000099.1 Protein Homology CDS 17673 19721 . + 0 ID=cds-WP_001091237.1;Parent=gene-C9E93_RS18045;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9E93_RS18045;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 19915 20796 . + . ID=gene-C9E93_RS18050;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9E93_RS18050;old_locus_tag=C9E93_18515 NZ_PYJV01000099.1 Protein Homology CDS 19915 20796 . + 0 ID=cds-WP_000984498.1;Parent=gene-C9E93_RS18050;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9E93_RS18050;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 20844 22217 . - . ID=gene-C9E93_RS18055;Name=C9E93_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18055;old_locus_tag=C9E93_18520 NZ_PYJV01000099.1 Protein Homology CDS 20844 22217 . - 0 ID=cds-WP_017441970.1;Parent=gene-C9E93_RS18055;Dbxref=GenBank:WP_017441970.1;Name=WP_017441970.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441970.1;locus_tag=C9E93_RS18055;product=MFS transporter;protein_id=WP_017441970.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 22393 23184 . + . ID=gene-C9E93_RS18060;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9E93_RS18060;old_locus_tag=C9E93_18525 NZ_PYJV01000099.1 Protein Homology CDS 22393 23184 . + 0 ID=cds-WP_001262197.1;Parent=gene-C9E93_RS18060;Dbxref=GenBank:WP_001262197.1;Name=WP_001262197.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9E93_RS18060;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262197.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 23396 23635 . - . ID=gene-C9E93_RS18065;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9E93_RS18065;old_locus_tag=C9E93_18530 NZ_PYJV01000099.1 Protein Homology CDS 23396 23635 . - 0 ID=cds-WP_001236777.1;Parent=gene-C9E93_RS18065;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9E93_RS18065;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 23793 23936 . + . ID=gene-C9E93_RS18070;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9E93_RS18070;old_locus_tag=C9E93_18535 NZ_PYJV01000099.1 Protein Homology CDS 23793 23936 . + 0 ID=cds-WP_000714547.1;Parent=gene-C9E93_RS18070;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9E93_RS18070;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 24007 24294 . + . ID=gene-C9E93_RS18075;Name=C9E93_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18075;old_locus_tag=C9E93_18540 NZ_PYJV01000099.1 Protein Homology CDS 24007 24294 . + 0 ID=cds-WP_001667129.1;Parent=gene-C9E93_RS18075;Dbxref=GenBank:WP_001667129.1;Name=WP_001667129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9E93_RS18075;product=YebO family protein;protein_id=WP_001667129.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 24943 25086 . + . ID=gene-C9E93_RS18080;Name=C9E93_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18080;old_locus_tag=C9E93_18545 NZ_PYJV01000099.1 Protein Homology CDS 24943 25086 . + 0 ID=cds-WP_001537930.1;Parent=gene-C9E93_RS18080;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9E93_RS18080;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 25099 25308 . + . ID=gene-C9E93_RS18085;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E93_RS18085;old_locus_tag=C9E93_18550 NZ_PYJV01000099.1 Protein Homology CDS 25099 25308 . + 0 ID=cds-WP_001062678.1;Parent=gene-C9E93_RS18085;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9E93_RS18085;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 25528 27273 . + . ID=gene-C9E93_RS18090;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E93_RS18090;old_locus_tag=C9E93_18555 NZ_PYJV01000099.1 Protein Homology CDS 25528 27273 . + 0 ID=cds-WP_000730317.1;Parent=gene-C9E93_RS18090;Dbxref=GenBank:WP_000730317.1;Name=WP_000730317.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9E93_RS18090;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730317.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 27339 28148 . + . ID=gene-C9E93_RS18095;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9E93_RS18095;old_locus_tag=C9E93_18560 NZ_PYJV01000099.1 Protein Homology CDS 27339 28148 . + 0 ID=cds-WP_023193489.1;Parent=gene-C9E93_RS18095;Dbxref=GenBank:WP_023193489.1;Name=WP_023193489.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9E93_RS18095;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_023193489.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 28145 28711 . - . ID=gene-C9E93_RS18100;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9E93_RS18100;old_locus_tag=C9E93_18565 NZ_PYJV01000099.1 Protein Homology CDS 28145 28711 . - 0 ID=cds-WP_001518359.1;Parent=gene-C9E93_RS18100;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9E93_RS18100;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_PYJV01000099.1 cmsearch riboswitch 28823 28924 . - . ID=id-NZ_PYJV01000099.1:28823..28924;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000099.1 RefSeq gene 29121 29579 . - . ID=gene-C9E93_RS18105;Name=C9E93_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18105;old_locus_tag=C9E93_18575 NZ_PYJV01000099.1 Protein Homology CDS 29121 29579 . - 0 ID=cds-WP_000156280.1;Parent=gene-C9E93_RS18105;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9E93_RS18105;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 29638 30489 . - . ID=gene-C9E93_RS18110;Name=C9E93_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18110;old_locus_tag=C9E93_18580 NZ_PYJV01000099.1 Protein Homology CDS 29638 30489 . - 0 ID=cds-WP_001518647.1;Parent=gene-C9E93_RS18110;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9E93_RS18110;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 30502 31302 . - . ID=gene-C9E93_RS18115;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9E93_RS18115;old_locus_tag=C9E93_18585 NZ_PYJV01000099.1 Protein Homology CDS 30502 31302 . - 0 ID=cds-WP_000406918.1;Parent=gene-C9E93_RS18115;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9E93_RS18115;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 31355 32323 . - . ID=gene-C9E93_RS18120;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9E93_RS18120;old_locus_tag=C9E93_18590 NZ_PYJV01000099.1 Protein Homology CDS 31355 32323 . - 0 ID=cds-WP_000150521.1;Parent=gene-C9E93_RS18120;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9E93_RS18120;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 32641 32808 . + . ID=gene-C9E93_RS24215;Name=C9E93_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24215 NZ_PYJV01000099.1 Protein Homology CDS 32641 32808 . + 0 ID=cds-WP_370739650.1;Parent=gene-C9E93_RS24215;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=C9E93_RS24215;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 32796 34355 . + . ID=gene-C9E93_RS18125;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=C9E93_RS18125;old_locus_tag=C9E93_18600 NZ_PYJV01000099.1 Protein Homology CDS 32796 34355 . + 0 ID=cds-WP_000421815.1;Parent=gene-C9E93_RS18125;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9E93_RS18125;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 34377 35978 . - . ID=gene-C9E93_RS18130;Name=C9E93_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18130;old_locus_tag=C9E93_18605 NZ_PYJV01000099.1 Protein Homology CDS 34377 35978 . - 0 ID=cds-WP_023238502.1;Parent=gene-C9E93_RS18130;Dbxref=GenBank:WP_023238502.1;Name=WP_023238502.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9E93_RS18130;product=EAL domain-containing protein;protein_id=WP_023238502.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 36116 37480 . - . ID=gene-C9E93_RS18135;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9E93_RS18135;old_locus_tag=C9E93_18610 NZ_PYJV01000099.1 Protein Homology CDS 36116 37480 . - 0 ID=cds-WP_000624274.1;Parent=gene-C9E93_RS18135;Dbxref=GenBank:WP_000624274.1;Name=WP_000624274.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9E93_RS18135;product=L-serine ammonia-lyase;protein_id=WP_000624274.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 37742 38320 . - . ID=gene-C9E93_RS18140;Name=C9E93_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18140;old_locus_tag=C9E93_18615 NZ_PYJV01000099.1 Protein Homology CDS 37742 38320 . - 0 ID=cds-WP_000381544.1;Parent=gene-C9E93_RS18140;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9E93_RS18140;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 38324 39688 . - . ID=gene-C9E93_RS18145;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9E93_RS18145;old_locus_tag=C9E93_18620 NZ_PYJV01000099.1 Protein Homology CDS 38324 39688 . - 0 ID=cds-WP_135370114.1;Parent=gene-C9E93_RS18145;Dbxref=GenBank:WP_135370114.1;Name=WP_135370114.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9E93_RS18145;product=aminodeoxychorismate synthase component 1;protein_id=WP_135370114.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 39769 39948 . + . ID=gene-C9E93_RS18150;Name=C9E93_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18150;old_locus_tag=C9E93_18625 NZ_PYJV01000099.1 Protein Homology CDS 39769 39948 . + 0 ID=cds-WP_000457328.1;Parent=gene-C9E93_RS18150;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9E93_RS18150;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 39954 40298 . - . ID=gene-C9E93_RS18155;Name=C9E93_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18155;old_locus_tag=C9E93_18630 NZ_PYJV01000099.1 Protein Homology CDS 39954 40298 . - 0 ID=cds-WP_135370113.1;Parent=gene-C9E93_RS18155;Dbxref=GenBank:WP_135370113.1;Name=WP_135370113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9E93_RS18155;product=RidA family protein;protein_id=WP_135370113.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 40429 42339 . + . ID=gene-C9E93_RS18160;Name=C9E93_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18160;old_locus_tag=C9E93_18635 NZ_PYJV01000099.1 Protein Homology CDS 40429 42339 . + 0 ID=cds-WP_000128807.1;Parent=gene-C9E93_RS18160;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9E93_RS18160;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 42397 43092 . + . ID=gene-C9E93_RS18165;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9E93_RS18165;old_locus_tag=C9E93_18640 NZ_PYJV01000099.1 Protein Homology CDS 42397 43092 . + 0 ID=cds-WP_001221014.1;Parent=gene-C9E93_RS18165;Dbxref=GenBank:WP_001221014.1;Name=WP_001221014.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9E93_RS18165;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 43164 43745 . + . ID=gene-C9E93_RS18170;Name=C9E93_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18170;old_locus_tag=C9E93_18645 NZ_PYJV01000099.1 Protein Homology CDS 43164 43745 . + 0 ID=cds-WP_135370112.1;Parent=gene-C9E93_RS18170;Dbxref=GenBank:WP_135370112.1;Name=WP_135370112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9E93_RS18170;product=Slp family lipoprotein;protein_id=WP_135370112.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 43950 45635 . + . ID=gene-C9E93_RS18175;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=C9E93_RS18175;old_locus_tag=C9E93_18655 NZ_PYJV01000099.1 Protein Homology CDS 43950 45635 . + 0 ID=cds-WP_001532413.1;Parent=gene-C9E93_RS18175;Dbxref=GenBank:WP_001532413.1;Name=WP_001532413.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9E93_RS18175;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_001532413.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 45708 46835 . + . ID=gene-C9E93_RS18180;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9E93_RS18180;old_locus_tag=C9E93_18660 NZ_PYJV01000099.1 Protein Homology CDS 45708 46835 . + 0 ID=cds-WP_001109135.1;Parent=gene-C9E93_RS18180;Dbxref=GenBank:WP_001109135.1;Name=WP_001109135.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9E93_RS18180;product=ribonuclease D;protein_id=WP_001109135.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 46957 47223 . - . ID=gene-C9E93_RS18185;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9E93_RS18185;old_locus_tag=C9E93_18665 NZ_PYJV01000099.1 Protein Homology CDS 46957 47223 . - 0 ID=cds-WP_001185666.1;Parent=gene-C9E93_RS18185;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9E93_RS18185;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 47227 48039 . - . ID=gene-C9E93_RS18190;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9E93_RS18190;old_locus_tag=C9E93_18670 NZ_PYJV01000099.1 Protein Homology CDS 47227 48039 . - 0 ID=cds-WP_135370111.1;Parent=gene-C9E93_RS18190;Dbxref=GenBank:WP_135370111.1;Name=WP_135370111.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9E93_RS18190;product=septum site-determining protein MinD;protein_id=WP_135370111.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 48063 48770 . - . ID=gene-C9E93_RS18195;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9E93_RS18195;old_locus_tag=C9E93_18675 NZ_PYJV01000099.1 Protein Homology CDS 48063 48770 . - 0 ID=cds-WP_000072527.1;Parent=gene-C9E93_RS18195;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9E93_RS18195;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 48896 49189 . + . ID=gene-C9E93_RS18200;Name=C9E93_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18200;old_locus_tag=C9E93_18680 NZ_PYJV01000099.1 Protein Homology CDS 48896 49189 . + 0 ID=cds-WP_001670513.1;Parent=gene-C9E93_RS18200;Dbxref=GenBank:WP_001670513.1;Name=WP_001670513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9E93_RS18200;product=YcgL domain-containing protein;protein_id=WP_001670513.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 49239 49898 . + . ID=gene-C9E93_RS18205;Name=C9E93_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18205;old_locus_tag=C9E93_18685 NZ_PYJV01000099.1 Protein Homology CDS 49239 49898 . + 0 ID=cds-WP_135370110.1;Parent=gene-C9E93_RS18205;Dbxref=GenBank:WP_135370110.1;Name=WP_135370110.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9E93_RS18205;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_135370110.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 49991 50437 . + . ID=gene-C9E93_RS18210;Name=C9E93_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18210;old_locus_tag=C9E93_18690 NZ_PYJV01000099.1 Protein Homology CDS 49991 50437 . + 0 ID=cds-WP_001285703.1;Parent=gene-C9E93_RS18210;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9E93_RS18210;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 50789 50926 . + . ID=gene-C9E93_RS18215;Name=C9E93_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18215;old_locus_tag=C9E93_18695 NZ_PYJV01000099.1 Protein Homology CDS 50789 50926 . + 0 ID=cds-WP_001519337.1;Parent=gene-C9E93_RS18215;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9E93_RS18215;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 51118 51291 . + . ID=gene-C9E93_RS18220;Name=C9E93_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18220;old_locus_tag=C9E93_18700 NZ_PYJV01000099.1 Protein Homology CDS 51118 51291 . + 0 ID=cds-WP_135370109.1;Parent=gene-C9E93_RS18220;Dbxref=GenBank:WP_135370109.1;Name=WP_135370109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9E93_RS18220;product=GnsA/GnsB family addiction module toxin;protein_id=WP_135370109.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 51363 51704 . - . ID=gene-C9E93_RS18225;Name=C9E93_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18225;old_locus_tag=C9E93_18705 NZ_PYJV01000099.1 Protein Homology CDS 51363 51704 . - 0 ID=cds-WP_000018967.1;Parent=gene-C9E93_RS18225;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9E93_RS18225;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 51813 52343 . - . ID=gene-C9E93_RS18230;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9E93_RS18230;old_locus_tag=C9E93_18710 NZ_PYJV01000099.1 Protein Homology CDS 51813 52343 . - 0 ID=cds-WP_000943475.1;Parent=gene-C9E93_RS18230;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9E93_RS18230;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 52485 54029 . - . ID=gene-C9E93_RS18235;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9E93_RS18235;old_locus_tag=C9E93_18715 NZ_PYJV01000099.1 Protein Homology CDS 52485 54029 . - 0 ID=cds-WP_000406446.1;Parent=gene-C9E93_RS18235;Dbxref=GenBank:WP_000406446.1;Name=WP_000406446.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9E93_RS18235;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406446.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 54249 54968 . + . ID=gene-C9E93_RS18240;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9E93_RS18240;old_locus_tag=C9E93_18720 NZ_PYJV01000099.1 Protein Homology CDS 54249 54968 . + 0 ID=cds-WP_000234826.1;Parent=gene-C9E93_RS18240;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9E93_RS18240;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 55015 56547 . - . ID=gene-C9E93_RS18245;Name=C9E93_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18245;old_locus_tag=C9E93_18725 NZ_PYJV01000099.1 Protein Homology CDS 55015 56547 . - 0 ID=cds-WP_050067660.1;Parent=gene-C9E93_RS18245;Dbxref=GenBank:WP_050067660.1;Name=WP_050067660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9E93_RS18245;product=SpoVR family protein;protein_id=WP_050067660.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 56870 58168 . + . ID=gene-C9E93_RS18250;Name=C9E93_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18250;old_locus_tag=C9E93_18730 NZ_PYJV01000099.1 Protein Homology CDS 56870 58168 . + 0 ID=cds-WP_001266937.1;Parent=gene-C9E93_RS18250;Dbxref=GenBank:WP_001266937.1;Name=WP_001266937.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9E93_RS18250;product=D-amino acid dehydrogenase;protein_id=WP_001266937.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 58182 59252 . + . ID=gene-C9E93_RS18255;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9E93_RS18255;old_locus_tag=C9E93_18735 NZ_PYJV01000099.1 Protein Homology CDS 58182 59252 . + 0 ID=cds-WP_135370108.1;Parent=gene-C9E93_RS18255;Dbxref=GenBank:WP_135370108.1;Name=WP_135370108.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9E93_RS18255;product=catabolic alanine racemase DadX;protein_id=WP_135370108.1;transl_table=11 NZ_PYJV01000099.1 RefSeq pseudogene 59285 59377 . + . ID=gene-C9E93_RS24220;Name=C9E93_RS24220;end_range=59377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24220;partial=true;pseudo=true NZ_PYJV01000099.1 Protein Homology CDS 59285 59377 . + 0 ID=cds-C9E93_RS24220;Parent=gene-C9E93_RS24220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=59377,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=C9E93_RS24220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000099.1 RefSeq pseudogene 59333 61048 . - . ID=gene-C9E93_RS18260;Name=C9E93_RS18260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS18260;old_locus_tag=C9E93_18740;partial=true;pseudo=true;start_range=.,59333 NZ_PYJV01000099.1 Protein Homology CDS 59333 61048 . - 0 ID=cds-C9E93_RS18260;Parent=gene-C9E93_RS18260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=C9E93_RS18260;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,59333;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 61145 62059 . - . ID=gene-C9E93_RS18265;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9E93_RS18265;old_locus_tag=C9E93_18745 NZ_PYJV01000099.1 Protein Homology CDS 61145 62059 . - 0 ID=cds-WP_135370107.1;Parent=gene-C9E93_RS18265;Dbxref=GenBank:WP_135370107.1;Name=WP_135370107.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9E93_RS18265;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_135370107.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 62230 62841 . + . ID=gene-C9E93_RS18270;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9E93_RS18270;old_locus_tag=C9E93_18750 NZ_PYJV01000099.1 Protein Homology CDS 62230 62841 . + 0 ID=cds-WP_000776974.1;Parent=gene-C9E93_RS18270;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9E93_RS18270;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 62855 63589 . - . ID=gene-C9E93_RS18275;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9E93_RS18275;old_locus_tag=C9E93_18755 NZ_PYJV01000099.1 Protein Homology CDS 62855 63589 . - 0 ID=cds-WP_080154496.1;Parent=gene-C9E93_RS18275;Dbxref=GenBank:WP_080154496.1;Name=WP_080154496.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9E93_RS18275;product=flagellar brake protein YcgR;protein_id=WP_080154496.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 63758 64012 . + . ID=gene-C9E93_RS18280;Name=C9E93_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18280;old_locus_tag=C9E93_18760 NZ_PYJV01000099.1 Protein Homology CDS 63758 64012 . + 0 ID=cds-WP_000511320.1;Parent=gene-C9E93_RS18280;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9E93_RS18280;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 64075 65787 . - . ID=gene-C9E93_RS18285;Name=C9E93_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18285;old_locus_tag=C9E93_18765 NZ_PYJV01000099.1 Protein Homology CDS 64075 65787 . - 0 ID=cds-WP_135370115.1;Parent=gene-C9E93_RS18285;Dbxref=GenBank:WP_135370115.1;Name=WP_135370115.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9E93_RS18285;product=alpha%2Calpha-trehalase;protein_id=WP_135370115.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 66001 67275 . - . ID=gene-C9E93_RS18290;Name=C9E93_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18290;old_locus_tag=C9E93_18770 NZ_PYJV01000099.1 Protein Homology CDS 66001 67275 . - 0 ID=cds-WP_001526439.1;Parent=gene-C9E93_RS18290;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9E93_RS18290;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 67670 67759 . - . ID=gene-C9E93_RS18295;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9E93_RS18295;old_locus_tag=C9E93_18775 NZ_PYJV01000099.1 Protein Homology CDS 67670 67759 . - 0 ID=cds-WP_000270301.1;Parent=gene-C9E93_RS18295;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9E93_RS18295;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 67772 68908 . - . ID=gene-C9E93_RS18300;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9E93_RS18300;old_locus_tag=C9E93_18780 NZ_PYJV01000099.1 Protein Homology CDS 67772 68908 . - 0 ID=cds-WP_000888110.1;Parent=gene-C9E93_RS18300;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9E93_RS18300;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 68920 70464 . - . ID=gene-C9E93_RS18305;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9E93_RS18305;old_locus_tag=C9E93_18785 NZ_PYJV01000099.1 Protein Homology CDS 68920 70464 . - 0 ID=cds-WP_000263613.1;Parent=gene-C9E93_RS18305;Dbxref=GenBank:WP_000263613.1;Name=WP_000263613.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9E93_RS18305;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263613.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 70539 71387 . - . ID=gene-C9E93_RS18310;Name=C9E93_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18310;old_locus_tag=C9E93_18790 NZ_PYJV01000099.1 Protein Homology CDS 70539 71387 . - 0 ID=cds-WP_000063377.1;Parent=gene-C9E93_RS18310;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9E93_RS18310;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 71384 71788 . - . ID=gene-C9E93_RS18315;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9E93_RS18315;old_locus_tag=C9E93_18795 NZ_PYJV01000099.1 Protein Homology CDS 71384 71788 . - 0 ID=cds-WP_023238495.1;Parent=gene-C9E93_RS18315;Dbxref=GenBank:WP_023238495.1;Name=WP_023238495.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9E93_RS18315;product=hydrogenase-1 operon protein HyaE;protein_id=WP_023238495.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 71778 72374 . - . ID=gene-C9E93_RS18320;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=C9E93_RS18320;old_locus_tag=C9E93_18800 NZ_PYJV01000099.1 Protein Homology CDS 71778 72374 . - 0 ID=cds-WP_000993799.1;Parent=gene-C9E93_RS18320;Dbxref=GenBank:WP_000993799.1;Name=WP_000993799.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9E93_RS18320;product=hydrogenase 1 maturation protease;protein_id=WP_000993799.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 72371 73102 . - . ID=gene-C9E93_RS18325;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9E93_RS18325;old_locus_tag=C9E93_18805 NZ_PYJV01000099.1 Protein Homology CDS 72371 73102 . - 0 ID=cds-WP_000147036.1;Parent=gene-C9E93_RS18325;Dbxref=GenBank:WP_000147036.1;Name=WP_000147036.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9E93_RS18325;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147036.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 73121 74914 . - . ID=gene-C9E93_RS18330;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9E93_RS18330;old_locus_tag=C9E93_18810 NZ_PYJV01000099.1 Protein Homology CDS 73121 74914 . - 0 ID=cds-WP_000070982.1;Parent=gene-C9E93_RS18330;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9E93_RS18330;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_PYJV01000099.1 RefSeq gene 74911 76029 . - . ID=gene-C9E93_RS18335;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=C9E93_RS18335;old_locus_tag=C9E93_18815 NZ_PYJV01000099.1 Protein Homology CDS 74911 76029 . - 0 ID=cds-WP_001058312.1;Parent=gene-C9E93_RS18335;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9E93_RS18335;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_PYJV01000099.1 RefSeq pseudogene 76378 76449 . - . ID=gene-C9E93_RS24225;Name=C9E93_RS24225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24225;partial=true;pseudo=true;start_range=.,76378 NZ_PYJV01000099.1 Protein Homology CDS 76378 76449 . - 0 ID=cds-C9E93_RS24225;Parent=gene-C9E93_RS24225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135374.1;locus_tag=C9E93_RS24225;partial=true;product=hypothetical protein;pseudo=true;start_range=.,76378;transl_table=11 ##sequence-region NZ_PYJV01000128.1 1 75328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000128.1 RefSeq region 1 75328 . + . ID=NZ_PYJV01000128.1:1..75328;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000128.1 RefSeq gene 1 268 . - . ID=gene-C9E93_RS23045;Name=C9E93_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23045;old_locus_tag=C9E93_23680;partial=true;start_range=.,1 NZ_PYJV01000128.1 Protein Homology CDS 1 268 . - 0 ID=cds-WP_135370273.1;Parent=gene-C9E93_RS23045;Dbxref=GenBank:WP_135370273.1;Name=WP_135370273.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=C9E93_RS23045;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_135370273.1;start_range=.,1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 274 1674 . - . ID=gene-C9E93_RS23050;Name=C9E93_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23050;old_locus_tag=C9E93_23685 NZ_PYJV01000128.1 Protein Homology CDS 274 1674 . - 0 ID=cds-WP_000724469.1;Parent=gene-C9E93_RS23050;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9E93_RS23050;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 1864 2496 . - . ID=gene-C9E93_RS23055;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9E93_RS23055;old_locus_tag=C9E93_23690 NZ_PYJV01000128.1 Protein Homology CDS 1864 2496 . - 0 ID=cds-WP_001041512.1;Parent=gene-C9E93_RS23055;Dbxref=GenBank:WP_001041512.1;Name=WP_001041512.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9E93_RS23055;product=molecular chaperone TorD;protein_id=WP_001041512.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 2489 5041 . - . ID=gene-C9E93_RS23060;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=C9E93_RS23060;old_locus_tag=C9E93_23695 NZ_PYJV01000128.1 Protein Homology CDS 2489 5041 . - 0 ID=cds-WP_135370272.1;Parent=gene-C9E93_RS23060;Dbxref=GenBank:WP_135370272.1;Name=WP_135370272.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9E93_RS23060;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_135370272.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 5031 6215 . - . ID=gene-C9E93_RS23065;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9E93_RS23065;old_locus_tag=C9E93_23700 NZ_PYJV01000128.1 Protein Homology CDS 5031 6215 . - 0 ID=cds-WP_001230254.1;Parent=gene-C9E93_RS23065;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9E93_RS23065;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 6345 7037 . + . ID=gene-C9E93_RS23070;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9E93_RS23070;old_locus_tag=C9E93_23705 NZ_PYJV01000128.1 Protein Homology CDS 6345 7037 . + 0 ID=cds-WP_001562512.1;Parent=gene-C9E93_RS23070;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9E93_RS23070;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 7010 8050 . - . ID=gene-C9E93_RS23075;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9E93_RS23075;old_locus_tag=C9E93_23710 NZ_PYJV01000128.1 Protein Homology CDS 7010 8050 . - 0 ID=cds-WP_135370271.1;Parent=gene-C9E93_RS23075;Dbxref=GenBank:WP_135370271.1;Name=WP_135370271.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9E93_RS23075;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_135370271.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 8130 10865 . + . ID=gene-C9E93_RS23080;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=C9E93_RS23080;old_locus_tag=C9E93_23715 NZ_PYJV01000128.1 Protein Homology CDS 8130 10865 . + 0 ID=cds-WP_135370270.1;Parent=gene-C9E93_RS23080;Dbxref=GenBank:WP_135370270.1;Name=WP_135370270.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9E93_RS23080;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_135370270.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 10891 12228 . - . ID=gene-C9E93_RS23085;Name=C9E93_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23085;old_locus_tag=C9E93_23720 NZ_PYJV01000128.1 Protein Homology CDS 10891 12228 . - 0 ID=cds-WP_000253524.1;Parent=gene-C9E93_RS23085;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=C9E93_RS23085;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 12313 13461 . - . ID=gene-C9E93_RS23090;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=C9E93_RS23090;old_locus_tag=C9E93_23725 NZ_PYJV01000128.1 Protein Homology CDS 12313 13461 . - 0 ID=cds-WP_000704735.1;Parent=gene-C9E93_RS23090;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=C9E93_RS23090;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 13458 14075 . - . ID=gene-C9E93_RS23095;Name=C9E93_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23095;old_locus_tag=C9E93_23730 NZ_PYJV01000128.1 Protein Homology CDS 13458 14075 . - 0 ID=cds-WP_001198741.1;Parent=gene-C9E93_RS23095;Dbxref=GenBank:WP_001198741.1;Name=WP_001198741.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=C9E93_RS23095;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198741.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 14059 14937 . - . ID=gene-C9E93_RS23100;Name=C9E93_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23100;old_locus_tag=C9E93_23735 NZ_PYJV01000128.1 Protein Homology CDS 14059 14937 . - 0 ID=cds-WP_000127129.1;Parent=gene-C9E93_RS23100;Dbxref=GenBank:WP_000127129.1;Name=WP_000127129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=C9E93_RS23100;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127129.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 14934 15623 . - . ID=gene-C9E93_RS23105;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=C9E93_RS23105;old_locus_tag=C9E93_23740 NZ_PYJV01000128.1 Protein Homology CDS 14934 15623 . - 0 ID=cds-WP_000174317.1;Parent=gene-C9E93_RS23105;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=C9E93_RS23105;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 15884 16729 . - . ID=gene-C9E93_RS23110;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9E93_RS23110;old_locus_tag=C9E93_23745 NZ_PYJV01000128.1 Protein Homology CDS 15884 16729 . - 0 ID=cds-WP_000985570.1;Parent=gene-C9E93_RS23110;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=C9E93_RS23110;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 17169 17861 . + . ID=gene-C9E93_RS23115;Name=C9E93_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23115;old_locus_tag=C9E93_23750 NZ_PYJV01000128.1 Protein Homology CDS 17169 17861 . + 0 ID=cds-WP_080194663.1;Parent=gene-C9E93_RS23115;Dbxref=GenBank:WP_080194663.1;Name=WP_080194663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=C9E93_RS23115;product=hypothetical protein;protein_id=WP_080194663.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 18212 20626 . - . ID=gene-C9E93_RS23120;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9E93_RS23120;old_locus_tag=C9E93_23755 NZ_PYJV01000128.1 Protein Homology CDS 18212 20626 . - 0 ID=cds-WP_000072047.1;Parent=gene-C9E93_RS23120;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9E93_RS23120;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 20655 21728 . - . ID=gene-C9E93_RS23125;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9E93_RS23125;old_locus_tag=C9E93_23760 NZ_PYJV01000128.1 Protein Homology CDS 20655 21728 . - 0 ID=cds-WP_000060081.1;Parent=gene-C9E93_RS23125;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9E93_RS23125;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 21876 22976 . - . ID=gene-C9E93_RS23130;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9E93_RS23130;old_locus_tag=C9E93_23765 NZ_PYJV01000128.1 Protein Homology CDS 21876 22976 . - 0 ID=cds-WP_000673474.1;Parent=gene-C9E93_RS23130;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9E93_RS23130;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 22981 24381 . - . ID=gene-C9E93_RS23135;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9E93_RS23135;old_locus_tag=C9E93_23770 NZ_PYJV01000128.1 Protein Homology CDS 22981 24381 . - 0 ID=cds-WP_000059093.1;Parent=gene-C9E93_RS23135;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9E93_RS23135;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 25042 25182 . + . ID=gene-C9E93_RS23140;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9E93_RS23140;old_locus_tag=C9E93_23775 NZ_PYJV01000128.1 Protein Homology CDS 25042 25182 . + 0 ID=cds-WP_000831330.1;Parent=gene-C9E93_RS23140;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9E93_RS23140;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 25199 25558 . + . ID=gene-C9E93_RS23145;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9E93_RS23145;old_locus_tag=C9E93_23780 NZ_PYJV01000128.1 Protein Homology CDS 25199 25558 . + 0 ID=cds-WP_000239725.1;Parent=gene-C9E93_RS23145;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9E93_RS23145;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 25522 25779 . + . ID=gene-C9E93_RS23150;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9E93_RS23150;old_locus_tag=C9E93_23785 NZ_PYJV01000128.1 Protein Homology CDS 25522 25779 . + 0 ID=cds-WP_001307474.1;Parent=gene-C9E93_RS23150;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9E93_RS23150;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 25782 27428 . + . ID=gene-C9E93_RS23155;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9E93_RS23155;old_locus_tag=C9E93_23790 NZ_PYJV01000128.1 Protein Homology CDS 25782 27428 . + 0 ID=cds-WP_000378283.1;Parent=gene-C9E93_RS23155;Dbxref=GenBank:WP_000378283.1;Name=WP_000378283.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9E93_RS23155;product=membrane protein insertase YidC;protein_id=WP_000378283.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 27570 28934 . + . ID=gene-C9E93_RS23160;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9E93_RS23160;old_locus_tag=C9E93_23795 NZ_PYJV01000128.1 Protein Homology CDS 27570 28934 . + 0 ID=cds-WP_000019081.1;Parent=gene-C9E93_RS23160;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9E93_RS23160;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 29117 30304 . + . ID=gene-C9E93_RS23165;Name=C9E93_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23165;old_locus_tag=C9E93_23800 NZ_PYJV01000128.1 Protein Homology CDS 29117 30304 . + 0 ID=cds-WP_135370314.1;Parent=gene-C9E93_RS23165;Dbxref=GenBank:WP_135370314.1;Name=WP_135370314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=C9E93_RS23165;product=MFS transporter;protein_id=WP_135370314.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 30273 31232 . + . ID=gene-C9E93_RS23170;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9E93_RS23170;old_locus_tag=C9E93_23805 NZ_PYJV01000128.1 Protein Homology CDS 30273 31232 . + 0 ID=cds-WP_000749366.1;Parent=gene-C9E93_RS23170;Dbxref=GenBank:WP_000749366.1;Name=WP_000749366.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9E93_RS23170;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749366.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 31390 32145 . + . ID=gene-C9E93_RS23175;Name=C9E93_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23175;old_locus_tag=C9E93_23810 NZ_PYJV01000128.1 Protein Homology CDS 31390 32145 . + 0 ID=cds-WP_135370313.1;Parent=gene-C9E93_RS23175;Dbxref=GenBank:WP_135370313.1;Name=WP_135370313.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9E93_RS23175;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_135370313.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 32145 32729 . + . ID=gene-C9E93_RS23180;Name=C9E93_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23180;old_locus_tag=C9E93_23815 NZ_PYJV01000128.1 Protein Homology CDS 32145 32729 . + 0 ID=cds-WP_076938353.1;Parent=gene-C9E93_RS23180;Dbxref=GenBank:WP_076938353.1;Name=WP_076938353.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541168.1;locus_tag=C9E93_RS23180;product=NADPH-dependent FMN reductase;protein_id=WP_076938353.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 32736 33161 . - . ID=gene-C9E93_RS23185;Name=C9E93_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23185;old_locus_tag=C9E93_23820 NZ_PYJV01000128.1 Protein Homology CDS 32736 33161 . - 0 ID=cds-WP_001747551.1;Parent=gene-C9E93_RS23185;Dbxref=GenBank:WP_001747551.1;Name=WP_001747551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747551.1;locus_tag=C9E93_RS23185;product=hypothetical protein;protein_id=WP_001747551.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 33207 34544 . - . ID=gene-C9E93_RS23190;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=C9E93_RS23190;old_locus_tag=C9E93_23825 NZ_PYJV01000128.1 Protein Homology CDS 33207 34544 . - 0 ID=cds-WP_001747550.1;Parent=gene-C9E93_RS23190;Dbxref=GenBank:WP_001747550.1;Name=WP_001747550.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9E93_RS23190;product=adenine permease AdeP;protein_id=WP_001747550.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 34713 35378 . + . ID=gene-C9E93_RS23195;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9E93_RS23195;old_locus_tag=C9E93_23830 NZ_PYJV01000128.1 Protein Homology CDS 34713 35378 . + 0 ID=cds-WP_135370312.1;Parent=gene-C9E93_RS23195;Dbxref=GenBank:WP_135370312.1;Name=WP_135370312.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9E93_RS23195;product=6-phosphogluconate phosphatase;protein_id=WP_135370312.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 35473 36198 . - . ID=gene-C9E93_RS23200;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9E93_RS23200;old_locus_tag=C9E93_23835 NZ_PYJV01000128.1 Protein Homology CDS 35473 36198 . - 0 ID=cds-WP_000377800.1;Parent=gene-C9E93_RS23200;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9E93_RS23200;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 36213 36986 . - . ID=gene-C9E93_RS23205;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9E93_RS23205;old_locus_tag=C9E93_23840 NZ_PYJV01000128.1 Protein Homology CDS 36213 36986 . - 0 ID=cds-WP_000063118.1;Parent=gene-C9E93_RS23205;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9E93_RS23205;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 37073 37963 . - . ID=gene-C9E93_RS23210;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9E93_RS23210;old_locus_tag=C9E93_23845 NZ_PYJV01000128.1 Protein Homology CDS 37073 37963 . - 0 ID=cds-WP_000212199.1;Parent=gene-C9E93_RS23210;Dbxref=GenBank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9E93_RS23210;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 37963 38922 . - . ID=gene-C9E93_RS23215;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9E93_RS23215;old_locus_tag=C9E93_23850 NZ_PYJV01000128.1 Protein Homology CDS 37963 38922 . - 0 ID=cds-WP_000741630.1;Parent=gene-C9E93_RS23215;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9E93_RS23215;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 39058 40098 . - . ID=gene-C9E93_RS23220;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9E93_RS23220;old_locus_tag=C9E93_23855 NZ_PYJV01000128.1 Protein Homology CDS 39058 40098 . - 0 ID=cds-WP_000867131.1;Parent=gene-C9E93_RS23220;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9E93_RS23220;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 40264 41637 . - . ID=gene-C9E93_RS23225;Name=C9E93_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23225;old_locus_tag=C9E93_23860 NZ_PYJV01000128.1 Protein Homology CDS 40264 41637 . - 0 ID=cds-WP_050067758.1;Parent=gene-C9E93_RS23225;Dbxref=GenBank:WP_050067758.1;Name=WP_050067758.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9E93_RS23225;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_050067758.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 41686 42504 . - . ID=gene-C9E93_RS23230;Name=C9E93_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23230;old_locus_tag=C9E93_23865 NZ_PYJV01000128.1 Protein Homology CDS 41686 42504 . - 0 ID=cds-WP_000166711.1;Parent=gene-C9E93_RS23230;Dbxref=GenBank:WP_000166711.1;Name=WP_000166711.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9E93_RS23230;product=shikimate 5-dehydrogenase;protein_id=WP_000166711.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 42599 44356 . + . ID=gene-C9E93_RS23235;Name=C9E93_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23235;old_locus_tag=C9E93_23870 NZ_PYJV01000128.1 Protein Homology CDS 42599 44356 . + 0 ID=cds-WP_108638642.1;Parent=gene-C9E93_RS23235;Dbxref=GenBank:WP_108638642.1;Name=WP_108638642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9E93_RS23235;product=SgrR family transcriptional regulator;protein_id=WP_108638642.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 44506 46335 . - . ID=gene-C9E93_RS23240;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9E93_RS23240;old_locus_tag=C9E93_23875 NZ_PYJV01000128.1 Protein Homology CDS 44506 46335 . - 0 ID=cds-WP_000334058.1;Parent=gene-C9E93_RS23240;Dbxref=GenBank:WP_000334058.1;Name=WP_000334058.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9E93_RS23240;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334058.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 46524 47894 . - . ID=gene-C9E93_RS23245;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9E93_RS23245;old_locus_tag=C9E93_23880 NZ_PYJV01000128.1 Protein Homology CDS 46524 47894 . - 0 ID=cds-WP_000934851.1;Parent=gene-C9E93_RS23245;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9E93_RS23245;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 48214 48912 . - . ID=gene-C9E93_RS23255;Name=C9E93_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23255;old_locus_tag=C9E93_23890 NZ_PYJV01000128.1 Protein Homology CDS 48214 48912 . - 0 ID=cds-WP_000009904.1;Parent=gene-C9E93_RS23255;Dbxref=GenBank:WP_000009904.1;Name=WP_000009904.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9E93_RS23255;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009904.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 49142 49561 . - . ID=gene-C9E93_RS23260;Name=C9E93_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23260;old_locus_tag=C9E93_23895 NZ_PYJV01000128.1 Protein Homology CDS 49142 49561 . - 0 ID=cds-WP_001251971.1;Parent=gene-C9E93_RS23260;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9E93_RS23260;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 49582 50964 . - . ID=gene-C9E93_RS23265;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9E93_RS23265;old_locus_tag=C9E93_23900 NZ_PYJV01000128.1 Protein Homology CDS 49582 50964 . - 0 ID=cds-WP_000190499.1;Parent=gene-C9E93_RS23265;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9E93_RS23265;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 50991 51854 . - . ID=gene-C9E93_RS23270;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9E93_RS23270;old_locus_tag=C9E93_23905 NZ_PYJV01000128.1 Protein Homology CDS 50991 51854 . - 0 ID=cds-WP_000896506.1;Parent=gene-C9E93_RS23270;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9E93_RS23270;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 51905 53446 . - . ID=gene-C9E93_RS23275;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9E93_RS23275;old_locus_tag=C9E93_23910 NZ_PYJV01000128.1 Protein Homology CDS 51905 53446 . - 0 ID=cds-WP_001176751.1;Parent=gene-C9E93_RS23275;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9E93_RS23275;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 53459 53992 . - . ID=gene-C9E93_RS23280;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9E93_RS23280;old_locus_tag=C9E93_23915 NZ_PYJV01000128.1 Protein Homology CDS 53459 53992 . - 0 ID=cds-WP_001288957.1;Parent=gene-C9E93_RS23280;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9E93_RS23280;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 54007 54477 . - . ID=gene-C9E93_RS23285;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9E93_RS23285;old_locus_tag=C9E93_23920 NZ_PYJV01000128.1 Protein Homology CDS 54007 54477 . - 0 ID=cds-WP_001052212.1;Parent=gene-C9E93_RS23285;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9E93_RS23285;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 54537 54776 . - . ID=gene-C9E93_RS23290;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9E93_RS23290;old_locus_tag=C9E93_23925 NZ_PYJV01000128.1 Protein Homology CDS 54537 54776 . - 0 ID=cds-WP_000429386.1;Parent=gene-C9E93_RS23290;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9E93_RS23290;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 54823 55638 . - . ID=gene-C9E93_RS23295;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9E93_RS23295;old_locus_tag=C9E93_23930 NZ_PYJV01000128.1 Protein Homology CDS 54823 55638 . - 0 ID=cds-WP_000135632.1;Parent=gene-C9E93_RS23295;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9E93_RS23295;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 55647 56027 . - . ID=gene-C9E93_RS23300;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9E93_RS23300;old_locus_tag=C9E93_23935 NZ_PYJV01000128.1 Protein Homology CDS 55647 56027 . - 0 ID=cds-WP_000116685.1;Parent=gene-C9E93_RS23300;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9E93_RS23300;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 56643 57266 . - . ID=gene-C9E93_RS23305;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9E93_RS23305;old_locus_tag=C9E93_23940 NZ_PYJV01000128.1 Protein Homology CDS 56643 57266 . - 0 ID=cds-WP_001519938.1;Parent=gene-C9E93_RS23305;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9E93_RS23305;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 57369 59258 . - . ID=gene-C9E93_RS23310;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9E93_RS23310;old_locus_tag=C9E93_23945 NZ_PYJV01000128.1 Protein Homology CDS 57369 59258 . - 0 ID=cds-WP_000499872.1;Parent=gene-C9E93_RS23310;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9E93_RS23310;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 59637 60080 . - . ID=gene-C9E93_RS23320;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9E93_RS23320;old_locus_tag=C9E93_23955 NZ_PYJV01000128.1 Protein Homology CDS 59637 60080 . - 0 ID=cds-WP_000763722.1;Parent=gene-C9E93_RS23320;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9E93_RS23320;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 60170 60628 . - . ID=gene-C9E93_RS23325;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9E93_RS23325;old_locus_tag=C9E93_23960 NZ_PYJV01000128.1 Protein Homology CDS 60170 60628 . - 0 ID=cds-WP_000433016.1;Parent=gene-C9E93_RS23325;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9E93_RS23325;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 60779 61771 . + . ID=gene-C9E93_RS23330;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9E93_RS23330;old_locus_tag=C9E93_23965 NZ_PYJV01000128.1 Protein Homology CDS 60779 61771 . + 0 ID=cds-WP_000845123.1;Parent=gene-C9E93_RS23330;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9E93_RS23330;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 61776 63227 . - . ID=gene-C9E93_RS23335;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9E93_RS23335;old_locus_tag=C9E93_23970 NZ_PYJV01000128.1 Protein Homology CDS 61776 63227 . - 0 ID=cds-WP_000956592.1;Parent=gene-C9E93_RS23335;Dbxref=GenBank:WP_000956592.1;Name=WP_000956592.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9E93_RS23335;product=ATPase RavA stimulator ViaA;protein_id=WP_000956592.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 63221 64717 . - . ID=gene-C9E93_RS23340;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=C9E93_RS23340;old_locus_tag=C9E93_23975 NZ_PYJV01000128.1 Protein Homology CDS 63221 64717 . - 0 ID=cds-WP_000940996.1;Parent=gene-C9E93_RS23340;Dbxref=GenBank:WP_000940996.1;Name=WP_000940996.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9E93_RS23340;product=ATPase RavA;protein_id=WP_000940996.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 65065 66933 . + . ID=gene-C9E93_RS23345;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9E93_RS23345;old_locus_tag=C9E93_23980 NZ_PYJV01000128.1 Protein Homology CDS 65065 66933 . + 0 ID=cds-WP_000102338.1;Parent=gene-C9E93_RS23345;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9E93_RS23345;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 67150 67569 . + . ID=gene-C9E93_RS23350;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9E93_RS23350;old_locus_tag=C9E93_23985 NZ_PYJV01000128.1 Protein Homology CDS 67150 67569 . + 0 ID=cds-WP_000715944.1;Parent=gene-C9E93_RS23350;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9E93_RS23350;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 67577 69082 . + . ID=gene-C9E93_RS23355;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9E93_RS23355;old_locus_tag=C9E93_23990 NZ_PYJV01000128.1 Protein Homology CDS 67577 69082 . + 0 ID=cds-WP_000339359.1;Parent=gene-C9E93_RS23355;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9E93_RS23355;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 69088 70053 . + . ID=gene-C9E93_RS23360;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9E93_RS23360;old_locus_tag=C9E93_23995 NZ_PYJV01000128.1 Protein Homology CDS 69088 70053 . + 0 ID=cds-WP_000211345.1;Parent=gene-C9E93_RS23360;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9E93_RS23360;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 70078 70968 . + . ID=gene-C9E93_RS23365;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9E93_RS23365;old_locus_tag=C9E93_24000 NZ_PYJV01000128.1 Protein Homology CDS 70078 70968 . + 0 ID=cds-WP_001056260.1;Parent=gene-C9E93_RS23365;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9E93_RS23365;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 71101 72030 . + . ID=gene-C9E93_RS23370;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E93_RS23370;old_locus_tag=C9E93_24005 NZ_PYJV01000128.1 Protein Homology CDS 71101 72030 . + 0 ID=cds-WP_000844730.1;Parent=gene-C9E93_RS23370;Dbxref=GenBank:WP_000844730.1;Name=WP_000844730.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9E93_RS23370;product=ribokinase;protein_id=WP_000844730.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 72034 73032 . + . ID=gene-C9E93_RS23375;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9E93_RS23375;old_locus_tag=C9E93_24010 NZ_PYJV01000128.1 Protein Homology CDS 72034 73032 . + 0 ID=cds-WP_000224487.1;Parent=gene-C9E93_RS23375;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9E93_RS23375;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 72998 74425 . - . ID=gene-C9E93_RS23380;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9E93_RS23380;old_locus_tag=C9E93_24015 NZ_PYJV01000128.1 Protein Homology CDS 72998 74425 . - 0 ID=cds-WP_000202071.1;Parent=gene-C9E93_RS23380;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9E93_RS23380;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_PYJV01000128.1 RefSeq gene 74437 75141 . - . ID=gene-C9E93_RS23385;Name=C9E93_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23385;old_locus_tag=C9E93_24020 NZ_PYJV01000128.1 Protein Homology CDS 74437 75141 . - 0 ID=cds-WP_001131144.1;Parent=gene-C9E93_RS23385;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9E93_RS23385;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 ##sequence-region NZ_PYJV01000008.1 1 73519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000008.1 RefSeq region 1 73519 . + . ID=NZ_PYJV01000008.1:1..73519;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000008.1 RefSeq gene 241 1215 . + . ID=gene-C9E93_RS00255;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9E93_RS00255;old_locus_tag=C9E93_00285 NZ_PYJV01000008.1 Protein Homology CDS 241 1215 . + 0 ID=cds-WP_000130728.1;Parent=gene-C9E93_RS00255;Dbxref=GenBank:WP_000130728.1;Name=WP_000130728.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9E93_RS00255;product=porphobilinogen synthase;protein_id=WP_000130728.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 1319 3205 . - . ID=gene-C9E93_RS00260;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=C9E93_RS00260;old_locus_tag=C9E93_00290 NZ_PYJV01000008.1 Protein Homology CDS 1319 3205 . - 0 ID=cds-WP_017465391.1;Parent=gene-C9E93_RS00260;Dbxref=GenBank:WP_017465391.1;Name=WP_017465391.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9E93_RS00260;product=propionate--CoA ligase;protein_id=WP_017465391.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 3246 4697 . - . ID=gene-C9E93_RS00265;Name=C9E93_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00265;old_locus_tag=C9E93_00295 NZ_PYJV01000008.1 Protein Homology CDS 3246 4697 . - 0 ID=cds-WP_135370318.1;Parent=gene-C9E93_RS00265;Dbxref=GenBank:WP_135370318.1;Name=WP_135370318.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9E93_RS00265;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_135370318.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 4737 5906 . - . ID=gene-C9E93_RS00270;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=C9E93_RS00270;old_locus_tag=C9E93_00300 NZ_PYJV01000008.1 Protein Homology CDS 4737 5906 . - 0 ID=cds-WP_000132749.1;Parent=gene-C9E93_RS00270;Dbxref=GenBank:WP_000132749.1;Name=WP_000132749.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9E93_RS00270;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132749.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 6029 6916 . - . ID=gene-C9E93_RS00275;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9E93_RS00275;old_locus_tag=C9E93_00305 NZ_PYJV01000008.1 Protein Homology CDS 6029 6916 . - 0 ID=cds-WP_000052225.1;Parent=gene-C9E93_RS00275;Dbxref=GenBank:WP_000052225.1;Name=WP_000052225.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=C9E93_RS00275;product=methylisocitrate lyase;protein_id=WP_000052225.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 7182 8807 . + . ID=gene-C9E93_RS00280;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9E93_RS00280;old_locus_tag=C9E93_00310 NZ_PYJV01000008.1 Protein Homology CDS 7182 8807 . + 0 ID=cds-WP_000205281.1;Parent=gene-C9E93_RS00280;Dbxref=GenBank:WP_000205281.1;Name=WP_000205281.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9E93_RS00280;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205281.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 8943 9218 . - . ID=gene-C9E93_RS00285;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9E93_RS00285;old_locus_tag=C9E93_00315 NZ_PYJV01000008.1 Protein Homology CDS 8943 9218 . - 0 ID=cds-WP_000848026.1;Parent=gene-C9E93_RS00285;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9E93_RS00285;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 9450 10082 . + . ID=gene-C9E93_RS00290;Name=C9E93_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00290;old_locus_tag=C9E93_00320 NZ_PYJV01000008.1 Protein Homology CDS 9450 10082 . + 0 ID=cds-WP_000433131.1;Parent=gene-C9E93_RS00290;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9E93_RS00290;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 10123 12231 . - . ID=gene-C9E93_RS00295;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9E93_RS00295;old_locus_tag=C9E93_00325 NZ_PYJV01000008.1 Protein Homology CDS 10123 12231 . - 0 ID=cds-WP_001127738.1;Parent=gene-C9E93_RS00295;Dbxref=GenBank:WP_001127738.1;Name=WP_001127738.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9E93_RS00295;product=ferrioxamine B receptor FoxA;protein_id=WP_001127738.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 12377 13381 . - . ID=gene-C9E93_RS00300;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=C9E93_RS00300;old_locus_tag=C9E93_00330 NZ_PYJV01000008.1 Protein Homology CDS 12377 13381 . - 0 ID=cds-WP_135370225.1;Parent=gene-C9E93_RS00300;Dbxref=GenBank:WP_135370225.1;Name=WP_135370225.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9E93_RS00300;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_135370225.1;transl_table=11 NZ_PYJV01000008.1 RefSeq pseudogene 13477 13669 . - . ID=gene-C9E93_RS23800;Name=C9E93_RS23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23800;pseudo=true NZ_PYJV01000008.1 Protein Homology CDS 13477 13669 . - 0 ID=cds-C9E93_RS23800;Parent=gene-C9E93_RS23800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=C9E93_RS23800;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 13588 13773 . - . ID=gene-C9E93_RS24025;Name=C9E93_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24025;old_locus_tag=C9E93_00335 NZ_PYJV01000008.1 Protein Homology CDS 13588 13773 . - 0 ID=cds-WP_305954967.1;Parent=gene-C9E93_RS24025;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=C9E93_RS24025;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 13719 14729 . - . ID=gene-C9E93_RS00310;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E93_RS00310;old_locus_tag=C9E93_00340 NZ_PYJV01000008.1 Protein Homology CDS 13719 14729 . - 0 ID=cds-WP_000151047.1;Parent=gene-C9E93_RS00310;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9E93_RS00310;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 14726 16129 . - . ID=gene-C9E93_RS00315;Name=C9E93_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00315;old_locus_tag=C9E93_00345 NZ_PYJV01000008.1 Protein Homology CDS 14726 16129 . - 0 ID=cds-WP_000393711.1;Parent=gene-C9E93_RS00315;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9E93_RS00315;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 16246 16347 . - . ID=gene-C9E93_RS00320;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9E93_RS00320;old_locus_tag=C9E93_00350 NZ_PYJV01000008.1 Protein Homology CDS 16246 16347 . - 0 ID=cds-WP_000934834.1;Parent=gene-C9E93_RS00320;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9E93_RS00320;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 16624 19596 . - . ID=gene-C9E93_RS00325;Name=C9E93_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00325;old_locus_tag=C9E93_00355 NZ_PYJV01000008.1 Protein Homology CDS 16624 19596 . - 0 ID=cds-WP_135370233.1;Parent=gene-C9E93_RS00325;Dbxref=GenBank:WP_135370233.1;Name=WP_135370233.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9E93_RS00325;product=type III restriction-modification system endonuclease;protein_id=WP_135370233.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 19606 21564 . - . ID=gene-C9E93_RS00330;Name=C9E93_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00330;old_locus_tag=C9E93_00360 NZ_PYJV01000008.1 Protein Homology CDS 19606 21564 . - 0 ID=cds-WP_023210782.1;Parent=gene-C9E93_RS00330;Dbxref=GenBank:WP_023210782.1;Name=WP_023210782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9E93_RS00330;product=site-specific DNA-methyltransferase;protein_id=WP_023210782.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 21753 23006 . - . ID=gene-C9E93_RS00335;Name=C9E93_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00335;old_locus_tag=C9E93_00365 NZ_PYJV01000008.1 Protein Homology CDS 21753 23006 . - 0 ID=cds-WP_000288503.1;Parent=gene-C9E93_RS00335;Dbxref=GenBank:WP_000288503.1;Name=WP_000288503.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9E93_RS00335;product=MFS transporter;protein_id=WP_000288503.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 23298 23492 . - . ID=gene-C9E93_RS00340;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9E93_RS00340;old_locus_tag=C9E93_00370 NZ_PYJV01000008.1 Protein Homology CDS 23298 23492 . - 0 ID=cds-WP_001159470.1;Parent=gene-C9E93_RS00340;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9E93_RS00340;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 23570 24034 . - . ID=gene-C9E93_RS00345;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9E93_RS00345;old_locus_tag=C9E93_00375 NZ_PYJV01000008.1 Protein Homology CDS 23570 24034 . - 0 ID=cds-WP_001020583.1;Parent=gene-C9E93_RS00345;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9E93_RS00345;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 24031 26334 . - . ID=gene-C9E93_RS00350;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9E93_RS00350;old_locus_tag=C9E93_00380 NZ_PYJV01000008.1 Protein Homology CDS 24031 26334 . - 0 ID=cds-WP_135370226.1;Parent=gene-C9E93_RS00350;Dbxref=GenBank:WP_135370226.1;Name=WP_135370226.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=C9E93_RS00350;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_135370226.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 26611 27837 . + . ID=gene-C9E93_RS00355;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9E93_RS00355;old_locus_tag=C9E93_00385 NZ_PYJV01000008.1 Protein Homology CDS 26611 27837 . + 0 ID=cds-WP_001254850.1;Parent=gene-C9E93_RS00355;Dbxref=GenBank:WP_001254850.1;Name=WP_001254850.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9E93_RS00355;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_001254850.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 27834 31001 . + . ID=gene-C9E93_RS00360;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=C9E93_RS00360;old_locus_tag=C9E93_00390 NZ_PYJV01000008.1 Protein Homology CDS 27834 31001 . + 0 ID=cds-WP_000673146.1;Parent=gene-C9E93_RS00360;Dbxref=GenBank:WP_000673146.1;Name=WP_000673146.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9E93_RS00360;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673146.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 31018 32475 . + . ID=gene-C9E93_RS00365;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=C9E93_RS00365;old_locus_tag=C9E93_00395 NZ_PYJV01000008.1 Protein Homology CDS 31018 32475 . + 0 ID=cds-WP_001543180.1;Parent=gene-C9E93_RS00365;Dbxref=GenBank:WP_001543180.1;Name=WP_001543180.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9E93_RS00365;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001543180.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 32545 32904 . - . ID=gene-C9E93_RS00370;Name=C9E93_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00370;old_locus_tag=C9E93_00400 NZ_PYJV01000008.1 Protein Homology CDS 32545 32904 . - 0 ID=cds-WP_000722978.1;Parent=gene-C9E93_RS00370;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9E93_RS00370;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 32962 33186 . - . ID=gene-C9E93_RS00375;Name=C9E93_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00375;old_locus_tag=C9E93_00405 NZ_PYJV01000008.1 Protein Homology CDS 32962 33186 . - 0 ID=cds-WP_000737125.1;Parent=gene-C9E93_RS00375;Dbxref=GenBank:WP_000737125.1;Name=WP_000737125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9E93_RS00375;product=membrane protein;protein_id=WP_000737125.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 33197 33838 . - . ID=gene-C9E93_RS00380;Name=C9E93_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00380;old_locus_tag=C9E93_00410 NZ_PYJV01000008.1 Protein Homology CDS 33197 33838 . - 0 ID=cds-WP_135370227.1;Parent=gene-C9E93_RS00380;Dbxref=GenBank:WP_135370227.1;Name=WP_135370227.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9E93_RS00380;product=helix-turn-helix transcriptional regulator;protein_id=WP_135370227.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 33982 34506 . - . ID=gene-C9E93_RS00385;Name=C9E93_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00385;old_locus_tag=C9E93_00415 NZ_PYJV01000008.1 Protein Homology CDS 33982 34506 . - 0 ID=cds-WP_000830239.1;Parent=gene-C9E93_RS00385;Dbxref=GenBank:WP_000830239.1;Name=WP_000830239.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9E93_RS00385;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830239.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 34906 35394 . - . ID=gene-C9E93_RS00390;Name=C9E93_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00390;old_locus_tag=C9E93_00420 NZ_PYJV01000008.1 Protein Homology CDS 34906 35394 . - 0 ID=cds-WP_000545419.1;Parent=gene-C9E93_RS00390;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9E93_RS00390;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 35367 36110 . - . ID=gene-C9E93_RS00395;Name=C9E93_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00395;old_locus_tag=C9E93_00425 NZ_PYJV01000008.1 Protein Homology CDS 35367 36110 . - 0 ID=cds-WP_000081377.1;Parent=gene-C9E93_RS00395;Dbxref=GenBank:WP_000081377.1;Name=WP_000081377.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9E93_RS00395;product=transcriptional regulator;protein_id=WP_000081377.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 36210 37784 . - . ID=gene-C9E93_RS00400;Name=C9E93_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00400;old_locus_tag=C9E93_00430 NZ_PYJV01000008.1 Protein Homology CDS 36210 37784 . - 0 ID=cds-WP_080110562.1;Parent=gene-C9E93_RS00400;Dbxref=GenBank:WP_080110562.1;Name=WP_080110562.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9E93_RS00400;product=EAL domain-containing protein;protein_id=WP_080110562.1;transl_table=11 NZ_PYJV01000008.1 RefSeq pseudogene 38286 38586 . - . ID=gene-C9E93_RS00405;Name=C9E93_RS00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00405;old_locus_tag=C9E93_00440;pseudo=true NZ_PYJV01000008.1 Protein Homology CDS 38286 38586 . - 0 ID=cds-C9E93_RS00405;Parent=gene-C9E93_RS00405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9E93_RS00405;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 38559 39293 . - . ID=gene-C9E93_RS00410;Name=C9E93_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00410;old_locus_tag=C9E93_00445 NZ_PYJV01000008.1 Protein Homology CDS 38559 39293 . - 0 ID=cds-WP_001005859.1;Parent=gene-C9E93_RS00410;Dbxref=GenBank:WP_001005859.1;Name=WP_001005859.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9E93_RS00410;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005859.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 39957 40493 . + . ID=gene-C9E93_RS00415;Name=C9E93_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00415;old_locus_tag=C9E93_00455 NZ_PYJV01000008.1 Protein Homology CDS 39957 40493 . + 0 ID=cds-WP_000062035.1;Parent=gene-C9E93_RS00415;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9E93_RS00415;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 40555 41316 . + . ID=gene-C9E93_RS00420;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9E93_RS00420;old_locus_tag=C9E93_00460 NZ_PYJV01000008.1 Protein Homology CDS 40555 41316 . + 0 ID=cds-WP_000781485.1;Parent=gene-C9E93_RS00420;Dbxref=GenBank:WP_000781485.1;Name=WP_000781485.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9E93_RS00420;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781485.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 41300 43861 . + . ID=gene-C9E93_RS00425;Name=C9E93_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00425;old_locus_tag=C9E93_00465 NZ_PYJV01000008.1 Protein Homology CDS 41300 43861 . + 0 ID=cds-WP_135370228.1;Parent=gene-C9E93_RS00425;Dbxref=GenBank:WP_135370228.1;Name=WP_135370228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9E93_RS00425;product=fimbrial outer membrane usher protein;protein_id=WP_135370228.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 43866 45191 . + . ID=gene-C9E93_RS00430;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9E93_RS00430;old_locus_tag=C9E93_00470 NZ_PYJV01000008.1 Protein Homology CDS 43866 45191 . + 0 ID=cds-WP_023221527.1;Parent=gene-C9E93_RS00430;Dbxref=GenBank:WP_023221527.1;Name=WP_023221527.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9E93_RS00430;product=fimbrial usher protein StbD;protein_id=WP_023221527.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 45157 45915 . + . ID=gene-C9E93_RS00435;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9E93_RS00435;old_locus_tag=C9E93_00475 NZ_PYJV01000008.1 Protein Homology CDS 45157 45915 . + 0 ID=cds-WP_001616202.1;Parent=gene-C9E93_RS00435;Dbxref=GenBank:WP_001616202.1;Name=WP_001616202.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9E93_RS00435;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001616202.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 45962 46360 . - . ID=gene-C9E93_RS00440;Name=C9E93_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00440;old_locus_tag=C9E93_00480 NZ_PYJV01000008.1 Protein Homology CDS 45962 46360 . - 0 ID=cds-WP_135370229.1;Parent=gene-C9E93_RS00440;Dbxref=GenBank:WP_135370229.1;Name=WP_135370229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9E93_RS00440;product=hypothetical protein;protein_id=WP_135370229.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 47051 47323 . + . ID=gene-C9E93_RS00445;Name=C9E93_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00445;old_locus_tag=C9E93_00485 NZ_PYJV01000008.1 Protein Homology CDS 47051 47323 . + 0 ID=cds-WP_001675688.1;Parent=gene-C9E93_RS00445;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9E93_RS00445;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 47268 48233 . - . ID=gene-C9E93_RS00450;Name=C9E93_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00450;old_locus_tag=C9E93_00490 NZ_PYJV01000008.1 Protein Homology CDS 47268 48233 . - 0 ID=cds-WP_000859023.1;Parent=gene-C9E93_RS00450;Dbxref=GenBank:WP_000859023.1;Name=WP_000859023.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9E93_RS00450;product=LysR family transcriptional regulator;protein_id=WP_000859023.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 48267 49181 . - . ID=gene-C9E93_RS00455;Name=C9E93_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00455;old_locus_tag=C9E93_00495 NZ_PYJV01000008.1 Protein Homology CDS 48267 49181 . - 0 ID=cds-WP_000105593.1;Parent=gene-C9E93_RS00455;Dbxref=GenBank:WP_000105593.1;Name=WP_000105593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9E93_RS00455;product=alpha/beta fold hydrolase;protein_id=WP_000105593.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 49181 50059 . - . ID=gene-C9E93_RS00460;Name=C9E93_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00460;old_locus_tag=C9E93_00500 NZ_PYJV01000008.1 Protein Homology CDS 49181 50059 . - 0 ID=cds-WP_135370230.1;Parent=gene-C9E93_RS00460;Dbxref=GenBank:WP_135370230.1;Name=WP_135370230.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9E93_RS00460;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_135370230.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 50074 50700 . - . ID=gene-C9E93_RS00465;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E93_RS00465;old_locus_tag=C9E93_00505 NZ_PYJV01000008.1 Protein Homology CDS 50074 50700 . - 0 ID=cds-WP_000379343.1;Parent=gene-C9E93_RS00465;Dbxref=GenBank:WP_000379343.1;Name=WP_000379343.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9E93_RS00465;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000379343.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 50702 52123 . - . ID=gene-C9E93_RS00470;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E93_RS00470;old_locus_tag=C9E93_00510 NZ_PYJV01000008.1 Protein Homology CDS 50702 52123 . - 0 ID=cds-WP_135370231.1;Parent=gene-C9E93_RS00470;Dbxref=GenBank:WP_135370231.1;Name=WP_135370231.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9E93_RS00470;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_135370231.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 52255 53493 . - . ID=gene-C9E93_RS00475;Name=C9E93_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00475;old_locus_tag=C9E93_00515 NZ_PYJV01000008.1 Protein Homology CDS 52255 53493 . - 0 ID=cds-WP_012543325.1;Parent=gene-C9E93_RS00475;Dbxref=GenBank:WP_012543325.1;Name=WP_012543325.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9E93_RS00475;product=MFS transporter;protein_id=WP_012543325.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 53834 54157 . - . ID=gene-C9E93_RS00480;Name=C9E93_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00480;old_locus_tag=C9E93_00520 NZ_PYJV01000008.1 Protein Homology CDS 53834 54157 . - 0 ID=cds-WP_001573898.1;Parent=gene-C9E93_RS00480;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9E93_RS00480;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_PYJV01000008.1 RefSeq pseudogene 54267 54342 . - . ID=gene-C9E93_RS24030;Name=C9E93_RS24030;end_range=54342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24030;old_locus_tag=C9E93_00525;partial=true;pseudo=true NZ_PYJV01000008.1 Protein Homology CDS 54267 54342 . - 1 ID=cds-C9E93_RS24030;Parent=gene-C9E93_RS24030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54342,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=C9E93_RS24030;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000008.1 RefSeq pseudogene 54343 54708 . - . ID=gene-C9E93_RS00490;Name=C9E93_RS00490;end_range=54708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00490;old_locus_tag=C9E93_00530;partial=true;pseudo=true;start_range=.,54343 NZ_PYJV01000008.1 Protein Homology CDS 54343 54708 . - 0 ID=cds-C9E93_RS00490;Parent=gene-C9E93_RS00490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=54708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=C9E93_RS00490;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,54343;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 54775 55779 . + . ID=gene-C9E93_RS00495;Name=C9E93_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00495;old_locus_tag=C9E93_00535 NZ_PYJV01000008.1 Protein Homology CDS 54775 55779 . + 0 ID=cds-WP_135370234.1;Parent=gene-C9E93_RS00495;Dbxref=GenBank:WP_135370234.1;Name=WP_135370234.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E93_RS00495;product=IS3 family transposase;protein_id=WP_135370234.1;transl_table=11 NZ_PYJV01000008.1 RefSeq pseudogene 55797 56051 . - . ID=gene-C9E93_RS00500;Name=C9E93_RS00500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00500;old_locus_tag=C9E93_00540;partial=true;pseudo=true;start_range=.,55797 NZ_PYJV01000008.1 Protein Homology CDS 55797 56051 . - 0 ID=cds-C9E93_RS00500;Parent=gene-C9E93_RS00500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=C9E93_RS00500;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,55797;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 56215 56290 . - . ID=gene-C9E93_RS00505;Name=C9E93_RS00505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00505;old_locus_tag=C9E93_00545 NZ_PYJV01000008.1 tRNAscan-SE tRNA 56215 56290 . - . ID=rna-C9E93_RS00505;Parent=gene-C9E93_RS00505;anticodon=(pos:complement(56255..56257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00505;product=tRNA-Thr NZ_PYJV01000008.1 tRNAscan-SE exon 56215 56290 . - . ID=exon-C9E93_RS00505-1;Parent=rna-C9E93_RS00505;anticodon=(pos:complement(56255..56257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00505;product=tRNA-Thr NZ_PYJV01000008.1 RefSeq gene 56406 57656 . - . ID=gene-C9E93_RS00510;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9E93_RS00510;old_locus_tag=C9E93_00550 NZ_PYJV01000008.1 Protein Homology CDS 56406 57656 . - 0 ID=cds-WP_135370232.1;Parent=gene-C9E93_RS00510;Dbxref=GenBank:WP_135370232.1;Name=WP_135370232.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9E93_RS00510;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_135370232.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 57668 58771 . - . ID=gene-C9E93_RS00515;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9E93_RS00515;old_locus_tag=C9E93_00555 NZ_PYJV01000008.1 Protein Homology CDS 57668 58771 . - 0 ID=cds-WP_001285275.1;Parent=gene-C9E93_RS00515;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9E93_RS00515;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 59054 60106 . + . ID=gene-C9E93_RS00520;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9E93_RS00520;old_locus_tag=C9E93_00560 NZ_PYJV01000008.1 Protein Homology CDS 59054 60106 . + 0 ID=cds-WP_001043667.1;Parent=gene-C9E93_RS00520;Dbxref=GenBank:WP_001043667.1;Name=WP_001043667.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9E93_RS00520;product=phosphoporin PhoE;protein_id=WP_001043667.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 60157 60558 . - . ID=gene-C9E93_RS00525;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9E93_RS00525;old_locus_tag=C9E93_00565 NZ_PYJV01000008.1 Protein Homology CDS 60157 60558 . - 0 ID=cds-WP_000174693.1;Parent=gene-C9E93_RS00525;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9E93_RS00525;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 60616 61860 . - . ID=gene-C9E93_RS00530;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=C9E93_RS00530;old_locus_tag=C9E93_00570 NZ_PYJV01000008.1 Protein Homology CDS 60616 61860 . - 0 ID=cds-WP_000189586.1;Parent=gene-C9E93_RS00530;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9E93_RS00530;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 61949 62407 . - . ID=gene-C9E93_RS00535;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9E93_RS00535;old_locus_tag=C9E93_00575 NZ_PYJV01000008.1 Protein Homology CDS 61949 62407 . - 0 ID=cds-WP_001292018.1;Parent=gene-C9E93_RS00535;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9E93_RS00535;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 62656 64113 . + . ID=gene-C9E93_RS00540;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9E93_RS00540;old_locus_tag=C9E93_00580 NZ_PYJV01000008.1 Protein Homology CDS 62656 64113 . + 0 ID=cds-WP_001292977.1;Parent=gene-C9E93_RS00540;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9E93_RS00540;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 64268 64882 . - . ID=gene-C9E93_RS00545;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9E93_RS00545;old_locus_tag=C9E93_00585 NZ_PYJV01000008.1 Protein Homology CDS 64268 64882 . - 0 ID=cds-WP_000602086.1;Parent=gene-C9E93_RS00545;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9E93_RS00545;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 64879 66018 . - . ID=gene-C9E93_RS00550;Name=C9E93_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00550;old_locus_tag=C9E93_00590 NZ_PYJV01000008.1 Protein Homology CDS 64879 66018 . - 0 ID=cds-WP_023193441.1;Parent=gene-C9E93_RS00550;Dbxref=GenBank:WP_023193441.1;Name=WP_023193441.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9E93_RS00550;product=RNA ligase RtcB family protein;protein_id=WP_023193441.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 66237 67292 . - . ID=gene-C9E93_RS00555;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9E93_RS00555;old_locus_tag=C9E93_00595 NZ_PYJV01000008.1 Protein Homology CDS 66237 67292 . - 0 ID=cds-WP_001226199.1;Parent=gene-C9E93_RS00555;Dbxref=GenBank:WP_001226199.1;Name=WP_001226199.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9E93_RS00555;product=DNA polymerase IV;protein_id=WP_001226199.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 67542 68282 . + . ID=gene-C9E93_RS00560;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9E93_RS00560;old_locus_tag=C9E93_00600 NZ_PYJV01000008.1 Protein Homology CDS 67542 68282 . + 0 ID=cds-WP_001225658.1;Parent=gene-C9E93_RS00560;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9E93_RS00560;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 68253 69020 . - . ID=gene-C9E93_RS00565;Name=C9E93_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00565;old_locus_tag=C9E93_00605 NZ_PYJV01000008.1 Protein Homology CDS 68253 69020 . - 0 ID=cds-WP_000333387.1;Parent=gene-C9E93_RS00565;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9E93_RS00565;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 69233 69811 . - . ID=gene-C9E93_RS00570;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9E93_RS00570;old_locus_tag=C9E93_00610 NZ_PYJV01000008.1 Protein Homology CDS 69233 69811 . - 0 ID=cds-WP_000284051.1;Parent=gene-C9E93_RS00570;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9E93_RS00570;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 70051 72495 . + . ID=gene-C9E93_RS00575;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9E93_RS00575;old_locus_tag=C9E93_00615 NZ_PYJV01000008.1 Protein Homology CDS 70051 72495 . + 0 ID=cds-WP_000973041.1;Parent=gene-C9E93_RS00575;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9E93_RS00575;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_PYJV01000008.1 RefSeq gene 72604 73371 . + . ID=gene-C9E93_RS00580;Name=C9E93_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00580;old_locus_tag=C9E93_00620 NZ_PYJV01000008.1 Protein Homology CDS 72604 73371 . + 0 ID=cds-WP_000015789.1;Parent=gene-C9E93_RS00580;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9E93_RS00580;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 ##sequence-region NZ_PYJV01000051.1 1 70754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000051.1 RefSeq region 1 70754 . + . ID=NZ_PYJV01000051.1:1..70754;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000051.1 RefSeq gene 316 1398 . + . ID=gene-C9E93_RS07830;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9E93_RS07830;old_locus_tag=C9E93_08060 NZ_PYJV01000051.1 Protein Homology CDS 316 1398 . + 0 ID=cds-WP_031605333.1;Parent=gene-C9E93_RS07830;Dbxref=GenBank:WP_031605333.1;Name=WP_031605333.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9E93_RS07830;product=porin OmpD;protein_id=WP_031605333.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 1542 1922 . + . ID=gene-C9E93_RS07835;Name=C9E93_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07835;old_locus_tag=C9E93_08065 NZ_PYJV01000051.1 Protein Homology CDS 1542 1922 . + 0 ID=cds-WP_014343841.1;Parent=gene-C9E93_RS07835;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9E93_RS07835;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 1947 3434 . - . ID=gene-C9E93_RS07840;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9E93_RS07840;old_locus_tag=C9E93_08070 NZ_PYJV01000051.1 Protein Homology CDS 1947 3434 . - 0 ID=cds-WP_126524112.1;Parent=gene-C9E93_RS07840;Dbxref=GenBank:WP_126524112.1;Name=WP_126524112.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9E93_RS07840;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_126524112.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 3552 4130 . + . ID=gene-C9E93_RS07845;Name=C9E93_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07845;old_locus_tag=C9E93_08075 NZ_PYJV01000051.1 Protein Homology CDS 3552 4130 . + 0 ID=cds-WP_000121044.1;Parent=gene-C9E93_RS07845;Dbxref=GenBank:WP_000121044.1;Name=WP_000121044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9E93_RS07845;product=TetR family transcriptional regulator;protein_id=WP_000121044.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 4344 5732 . + . ID=gene-C9E93_RS07850;Name=C9E93_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07850;old_locus_tag=C9E93_08080 NZ_PYJV01000051.1 Protein Homology CDS 4344 5732 . + 0 ID=cds-WP_000198255.1;Parent=gene-C9E93_RS07850;Dbxref=GenBank:WP_000198255.1;Name=WP_000198255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9E93_RS07850;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198255.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 5824 9564 . + . ID=gene-C9E93_RS07855;Name=C9E93_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07855;old_locus_tag=C9E93_08085 NZ_PYJV01000051.1 Protein Homology CDS 5824 9564 . + 0 ID=cds-WP_135370221.1;Parent=gene-C9E93_RS07855;Dbxref=GenBank:WP_135370221.1;Name=WP_135370221.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9E93_RS07855;product=nitrate reductase subunit alpha;protein_id=WP_135370221.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 9561 11105 . + . ID=gene-C9E93_RS07860;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E93_RS07860;old_locus_tag=C9E93_08090 NZ_PYJV01000051.1 Protein Homology CDS 9561 11105 . + 0 ID=cds-WP_000702591.1;Parent=gene-C9E93_RS07860;Dbxref=GenBank:WP_000702591.1;Name=WP_000702591.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9E93_RS07860;product=nitrate reductase subunit beta;protein_id=WP_000702591.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 11105 11800 . + . ID=gene-C9E93_RS07865;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9E93_RS07865;old_locus_tag=C9E93_08095 NZ_PYJV01000051.1 Protein Homology CDS 11105 11800 . + 0 ID=cds-WP_001166287.1;Parent=gene-C9E93_RS07865;Dbxref=GenBank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9E93_RS07865;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 11797 12477 . + . ID=gene-C9E93_RS07870;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E93_RS07870;old_locus_tag=C9E93_08100 NZ_PYJV01000051.1 Protein Homology CDS 11797 12477 . + 0 ID=cds-WP_000617106.1;Parent=gene-C9E93_RS07870;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9E93_RS07870;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 12583 13476 . + . ID=gene-C9E93_RS07875;Name=C9E93_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07875;old_locus_tag=C9E93_08105 NZ_PYJV01000051.1 Protein Homology CDS 12583 13476 . + 0 ID=cds-WP_135370222.1;Parent=gene-C9E93_RS07875;Dbxref=GenBank:WP_135370222.1;Name=WP_135370222.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9E93_RS07875;product=PhzF family isomerase;protein_id=WP_135370222.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 13512 14357 . - . ID=gene-C9E93_RS07880;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9E93_RS07880;old_locus_tag=C9E93_08110 NZ_PYJV01000051.1 Protein Homology CDS 13512 14357 . - 0 ID=cds-WP_061380083.1;Parent=gene-C9E93_RS07880;Dbxref=GenBank:WP_061380083.1;Name=WP_061380083.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9E93_RS07880;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_061380083.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 14641 15273 . - . ID=gene-C9E93_RS07890;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9E93_RS07890;old_locus_tag=C9E93_08120 NZ_PYJV01000051.1 Protein Homology CDS 14641 15273 . - 0 ID=cds-WP_135370224.1;Parent=gene-C9E93_RS07890;Dbxref=GenBank:WP_135370224.1;Name=WP_135370224.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9E93_RS07890;product=type III secretion system effector SteA;protein_id=WP_135370224.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 15786 17279 . + . ID=gene-C9E93_RS07900;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9E93_RS07900;old_locus_tag=C9E93_08130 NZ_PYJV01000051.1 Protein Homology CDS 15786 17279 . + 0 ID=cds-WP_000857110.1;Parent=gene-C9E93_RS07900;Dbxref=GenBank:WP_000857110.1;Name=WP_000857110.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9E93_RS07900;product=L-asparagine permease;protein_id=WP_000857110.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 17356 17577 . - . ID=gene-C9E93_RS07905;Name=C9E93_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07905;old_locus_tag=C9E93_08135 NZ_PYJV01000051.1 Protein Homology CDS 17356 17577 . - 0 ID=cds-WP_000732362.1;Parent=gene-C9E93_RS07905;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9E93_RS07905;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 17722 18783 . - . ID=gene-C9E93_RS07910;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=C9E93_RS07910;old_locus_tag=C9E93_08140 NZ_PYJV01000051.1 Protein Homology CDS 17722 18783 . - 0 ID=cds-WP_000550641.1;Parent=gene-C9E93_RS07910;Dbxref=GenBank:WP_000550641.1;Name=WP_000550641.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9E93_RS07910;product=7-bladed beta-propeller protein YncE;protein_id=WP_000550641.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 19047 21167 . + . ID=gene-C9E93_RS07915;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=C9E93_RS07915;old_locus_tag=C9E93_08145 NZ_PYJV01000051.1 Protein Homology CDS 19047 21167 . + 0 ID=cds-WP_135370679.1;Parent=gene-C9E93_RS07915;Dbxref=GenBank:WP_135370679.1;Name=WP_135370679.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9E93_RS07915;product=TonB-dependent receptor PqqU;protein_id=WP_135370679.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 21223 21888 . - . ID=gene-C9E93_RS07920;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9E93_RS07920;old_locus_tag=C9E93_08150 NZ_PYJV01000051.1 Protein Homology CDS 21223 21888 . - 0 ID=cds-WP_058214741.1;Parent=gene-C9E93_RS07920;Dbxref=GenBank:WP_058214741.1;Name=WP_058214741.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9E93_RS07920;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_058214741.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 22222 23259 . - . ID=gene-C9E93_RS07925;Name=C9E93_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07925;old_locus_tag=C9E93_08155 NZ_PYJV01000051.1 Protein Homology CDS 22222 23259 . - 0 ID=cds-WP_001522633.1;Parent=gene-C9E93_RS07925;Dbxref=GenBank:WP_001522633.1;Name=WP_001522633.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9E93_RS07925;product=NADP-dependent oxidoreductase;protein_id=WP_001522633.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 23471 23986 . + . ID=gene-C9E93_RS07930;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9E93_RS07930;old_locus_tag=C9E93_08160 NZ_PYJV01000051.1 Protein Homology CDS 23471 23986 . + 0 ID=cds-WP_000155373.1;Parent=gene-C9E93_RS07930;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9E93_RS07930;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 23986 24435 . + . ID=gene-C9E93_RS07935;Name=C9E93_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07935;old_locus_tag=C9E93_08165 NZ_PYJV01000051.1 Protein Homology CDS 23986 24435 . + 0 ID=cds-WP_001076571.1;Parent=gene-C9E93_RS07935;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9E93_RS07935;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 24440 24673 . - . ID=gene-C9E93_RS07940;Name=C9E93_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07940;old_locus_tag=C9E93_08170 NZ_PYJV01000051.1 Protein Homology CDS 24440 24673 . - 0 ID=cds-WP_000018720.1;Parent=gene-C9E93_RS07940;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9E93_RS07940;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 24897 26222 . + . ID=gene-C9E93_RS07945;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=C9E93_RS07945;old_locus_tag=C9E93_08175 NZ_PYJV01000051.1 Protein Homology CDS 24897 26222 . + 0 ID=cds-WP_135370680.1;Parent=gene-C9E93_RS07945;Dbxref=GenBank:WP_135370680.1;Name=WP_135370680.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9E93_RS07945;product=virulence-associated effector SrfA;protein_id=WP_135370680.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 26227 29208 . + . ID=gene-C9E93_RS07950;Name=C9E93_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07950;old_locus_tag=C9E93_08180 NZ_PYJV01000051.1 Protein Homology CDS 26227 29208 . + 0 ID=cds-WP_135370681.1;Parent=gene-C9E93_RS07950;Dbxref=GenBank:WP_135370681.1;Name=WP_135370681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=C9E93_RS07950;product=virulence factor SrfB;protein_id=WP_135370681.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 29205 31349 . + . ID=gene-C9E93_RS07955;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=C9E93_RS07955;old_locus_tag=C9E93_08185 NZ_PYJV01000051.1 Protein Homology CDS 29205 31349 . + 0 ID=cds-WP_135370682.1;Parent=gene-C9E93_RS07955;Dbxref=GenBank:WP_135370682.1;Name=WP_135370682.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9E93_RS07955;product=virulence-associated effector SrfC;protein_id=WP_135370682.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 31394 31567 . - . ID=gene-C9E93_RS07960;Name=C9E93_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07960;old_locus_tag=C9E93_08190 NZ_PYJV01000051.1 Protein Homology CDS 31394 31567 . - 0 ID=cds-WP_000171943.1;Parent=gene-C9E93_RS07960;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9E93_RS07960;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 31766 31861 . + . ID=gene-C9E93_RS07965;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9E93_RS07965;old_locus_tag=C9E93_08195 NZ_PYJV01000051.1 Protein Homology CDS 31766 31861 . + 0 ID=cds-WP_001103198.1;Parent=gene-C9E93_RS07965;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9E93_RS07965;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 31966 33411 . - . ID=gene-C9E93_RS07970;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9E93_RS07970;old_locus_tag=C9E93_08200 NZ_PYJV01000051.1 Protein Homology CDS 31966 33411 . - 0 ID=cds-WP_072276816.1;Parent=gene-C9E93_RS07970;Dbxref=GenBank:WP_072276816.1;Name=WP_072276816.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9E93_RS07970;product=aminobutyraldehyde dehydrogenase;protein_id=WP_072276816.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 33526 34950 . - . ID=gene-C9E93_RS07975;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=C9E93_RS07975;old_locus_tag=C9E93_08205 NZ_PYJV01000051.1 Protein Homology CDS 33526 34950 . - 0 ID=cds-WP_000760692.1;Parent=gene-C9E93_RS07975;Dbxref=GenBank:WP_000760692.1;Name=WP_000760692.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9E93_RS07975;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760692.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 35086 35856 . - . ID=gene-C9E93_RS07980;Name=C9E93_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07980;old_locus_tag=C9E93_08210 NZ_PYJV01000051.1 Protein Homology CDS 35086 35856 . - 0 ID=cds-WP_076735639.1;Parent=gene-C9E93_RS07980;Dbxref=GenBank:WP_076735639.1;Name=WP_076735639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9E93_RS07980;product=M15 family metallopeptidase;protein_id=WP_076735639.1;transl_table=11 NZ_PYJV01000051.1 RefSeq pseudogene 36116 36347 . - . ID=gene-C9E93_RS07985;Name=C9E93_RS07985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS07985;old_locus_tag=C9E93_08215;pseudo=true NZ_PYJV01000051.1 Protein Homology CDS 36116 36347 . - 0 ID=cds-C9E93_RS07985;Parent=gene-C9E93_RS07985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9E93_RS07985;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 36380 36778 . - . ID=gene-C9E93_RS07990;Name=ugtL;gbkey=Gene;gene=ugtL;gene_biotype=protein_coding;locus_tag=C9E93_RS07990;old_locus_tag=C9E93_08220 NZ_PYJV01000051.1 Protein Homology CDS 36380 36778 . - 0 ID=cds-WP_135370683.1;Parent=gene-C9E93_RS07990;Dbxref=GenBank:WP_135370683.1;Name=WP_135370683.1;gbkey=CDS;gene=ugtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9E93_RS07990;product=regulatory protein UgtL;protein_id=WP_135370683.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 37294 38244 . + . ID=gene-C9E93_RS07995;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9E93_RS07995;old_locus_tag=C9E93_08225 NZ_PYJV01000051.1 Protein Homology CDS 37294 38244 . + 0 ID=cds-WP_135370684.1;Parent=gene-C9E93_RS07995;Dbxref=GenBank:WP_135370684.1;Name=WP_135370684.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9E93_RS07995;product=SPI-2 type III secretion system effector SifB;protein_id=WP_135370684.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 38517 38747 . + . ID=gene-C9E93_RS08000;Name=C9E93_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08000;old_locus_tag=C9E93_08230 NZ_PYJV01000051.1 Protein Homology CDS 38517 38747 . + 0 ID=cds-WP_061380119.1;Parent=gene-C9E93_RS08000;Dbxref=GenBank:WP_061380119.1;Name=WP_061380119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9E93_RS08000;product=YncJ family protein;protein_id=WP_061380119.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 38748 40712 . - . ID=gene-C9E93_RS08005;Name=C9E93_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08005;old_locus_tag=C9E93_08235 NZ_PYJV01000051.1 Protein Homology CDS 38748 40712 . - 0 ID=cds-WP_135370685.1;Parent=gene-C9E93_RS08005;Dbxref=GenBank:WP_135370685.1;Name=WP_135370685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9E93_RS08005;product=peptidase U32 family protein;protein_id=WP_135370685.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 40791 41327 . - . ID=gene-C9E93_RS08010;Name=C9E93_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08010;old_locus_tag=C9E93_08240 NZ_PYJV01000051.1 Protein Homology CDS 40791 41327 . - 0 ID=cds-WP_000369543.1;Parent=gene-C9E93_RS08010;Dbxref=GenBank:WP_000369543.1;Name=WP_000369543.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9E93_RS08010;product=helix-turn-helix domain-containing protein;protein_id=WP_000369543.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 41419 42597 . + . ID=gene-C9E93_RS08015;Name=C9E93_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08015;old_locus_tag=C9E93_08245 NZ_PYJV01000051.1 Protein Homology CDS 41419 42597 . + 0 ID=cds-WP_135370686.1;Parent=gene-C9E93_RS08015;Dbxref=GenBank:WP_135370686.1;Name=WP_135370686.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9E93_RS08015;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_135370686.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 42651 43319 . - . ID=gene-C9E93_RS08020;Name=C9E93_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08020;old_locus_tag=C9E93_08250 NZ_PYJV01000051.1 Protein Homology CDS 42651 43319 . - 0 ID=cds-WP_001259023.1;Parent=gene-C9E93_RS08020;Dbxref=GenBank:WP_001259023.1;Name=WP_001259023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9E93_RS08020;product=DUF3313 domain-containing protein;protein_id=WP_001259023.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 43475 44071 . - . ID=gene-C9E93_RS08025;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9E93_RS08025;old_locus_tag=C9E93_08255 NZ_PYJV01000051.1 Protein Homology CDS 43475 44071 . - 0 ID=cds-WP_135370687.1;Parent=gene-C9E93_RS08025;Dbxref=GenBank:WP_135370687.1;Name=WP_135370687.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9E93_RS08025;product=tellurite resistance methyltransferase TehB;protein_id=WP_135370687.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 44058 45071 . - . ID=gene-C9E93_RS08030;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9E93_RS08030;old_locus_tag=C9E93_08260 NZ_PYJV01000051.1 Protein Homology CDS 44058 45071 . - 0 ID=cds-WP_001243996.1;Parent=gene-C9E93_RS08030;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9E93_RS08030;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 45178 46158 . + . ID=gene-C9E93_RS08035;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9E93_RS08035;old_locus_tag=C9E93_08265 NZ_PYJV01000051.1 Protein Homology CDS 45178 46158 . + 0 ID=cds-WP_001527770.1;Parent=gene-C9E93_RS08035;Dbxref=GenBank:WP_001527770.1;Name=WP_001527770.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9E93_RS08035;product=YdcK family protein;protein_id=WP_001527770.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 46155 46694 . - . ID=gene-C9E93_RS08040;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9E93_RS08040;old_locus_tag=C9E93_08270 NZ_PYJV01000051.1 Protein Homology CDS 46155 46694 . - 0 ID=cds-WP_000229306.1;Parent=gene-C9E93_RS08040;Dbxref=GenBank:WP_000229306.1;Name=WP_000229306.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9E93_RS08040;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229306.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 46911 48029 . + . ID=gene-C9E93_RS08045;Name=C9E93_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08045;old_locus_tag=C9E93_08275 NZ_PYJV01000051.1 Protein Homology CDS 46911 48029 . + 0 ID=cds-WP_135370688.1;Parent=gene-C9E93_RS08045;Dbxref=GenBank:WP_135370688.1;Name=WP_135370688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9E93_RS08045;product=M42 family metallopeptidase;protein_id=WP_135370688.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 48026 48307 . + . ID=gene-C9E93_RS08050;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9E93_RS08050;old_locus_tag=C9E93_08280 NZ_PYJV01000051.1 Protein Homology CDS 48026 48307 . + 0 ID=cds-WP_000976132.1;Parent=gene-C9E93_RS08050;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9E93_RS08050;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 48318 49631 . + . ID=gene-C9E93_RS08055;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=C9E93_RS08055;old_locus_tag=C9E93_08285 NZ_PYJV01000051.1 Protein Homology CDS 48318 49631 . + 0 ID=cds-WP_000460835.1;Parent=gene-C9E93_RS08055;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9E93_RS08055;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 49645 50451 . + . ID=gene-C9E93_RS08060;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9E93_RS08060;old_locus_tag=C9E93_08290 NZ_PYJV01000051.1 Protein Homology CDS 49645 50451 . + 0 ID=cds-WP_000118620.1;Parent=gene-C9E93_RS08060;Dbxref=GenBank:WP_000118620.1;Name=WP_000118620.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9E93_RS08060;product=BtpA family protein SgcQ;protein_id=WP_000118620.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 50583 51020 . + . ID=gene-C9E93_RS08065;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9E93_RS08065;old_locus_tag=C9E93_08295 NZ_PYJV01000051.1 Protein Homology CDS 50583 51020 . + 0 ID=cds-WP_000606454.1;Parent=gene-C9E93_RS08065;Dbxref=GenBank:WP_000606454.1;Name=WP_000606454.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9E93_RS08065;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606454.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 51032 51664 . + . ID=gene-C9E93_RS08070;Name=C9E93_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08070;old_locus_tag=C9E93_08300 NZ_PYJV01000051.1 Protein Homology CDS 51032 51664 . + 0 ID=cds-WP_135370689.1;Parent=gene-C9E93_RS08070;Dbxref=GenBank:WP_135370689.1;Name=WP_135370689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9E93_RS08070;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_135370689.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 51680 52471 . + . ID=gene-C9E93_RS08075;Name=C9E93_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08075;old_locus_tag=C9E93_08305 NZ_PYJV01000051.1 Protein Homology CDS 51680 52471 . + 0 ID=cds-WP_001670738.1;Parent=gene-C9E93_RS08075;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9E93_RS08075;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 52471 52908 . + . ID=gene-C9E93_RS08080;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9E93_RS08080;old_locus_tag=C9E93_08310 NZ_PYJV01000051.1 Protein Homology CDS 52471 52908 . + 0 ID=cds-WP_000354851.1;Parent=gene-C9E93_RS08080;Dbxref=GenBank:WP_000354851.1;Name=WP_000354851.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9E93_RS08080;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354851.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 53049 54302 . - . ID=gene-C9E93_RS08085;Name=C9E93_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08085;old_locus_tag=C9E93_08315 NZ_PYJV01000051.1 Protein Homology CDS 53049 54302 . - 0 ID=cds-WP_031605310.1;Parent=gene-C9E93_RS08085;Dbxref=GenBank:WP_031605310.1;Name=WP_031605310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=C9E93_RS08085;product=enolase C-terminal domain-like protein;protein_id=WP_031605310.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 54641 55408 . + . ID=gene-C9E93_RS08090;Name=C9E93_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08090;old_locus_tag=C9E93_08320 NZ_PYJV01000051.1 Protein Homology CDS 54641 55408 . + 0 ID=cds-WP_000125687.1;Parent=gene-C9E93_RS08090;Dbxref=GenBank:WP_000125687.1;Name=WP_000125687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=C9E93_RS08090;product=SDR family oxidoreductase;protein_id=WP_000125687.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 55492 56853 . + . ID=gene-C9E93_RS08095;Name=C9E93_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08095;old_locus_tag=C9E93_08325 NZ_PYJV01000051.1 Protein Homology CDS 55492 56853 . + 0 ID=cds-WP_000648129.1;Parent=gene-C9E93_RS08095;Dbxref=GenBank:WP_000648129.1;Name=WP_000648129.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=C9E93_RS08095;product=MFS transporter;protein_id=WP_000648129.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 56822 57913 . + . ID=gene-C9E93_RS08100;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9E93_RS08100;old_locus_tag=C9E93_08330 NZ_PYJV01000051.1 Protein Homology CDS 56822 57913 . + 0 ID=cds-WP_135369932.1;Parent=gene-C9E93_RS08100;Dbxref=GenBank:WP_135369932.1;Name=WP_135369932.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=C9E93_RS08100;product=L-idonate 5-dehydrogenase;protein_id=WP_135369932.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 58004 58723 . + . ID=gene-C9E93_RS08105;Name=C9E93_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08105;old_locus_tag=C9E93_08335 NZ_PYJV01000051.1 Protein Homology CDS 58004 58723 . + 0 ID=cds-WP_000023779.1;Parent=gene-C9E93_RS08105;Dbxref=GenBank:WP_000023779.1;Name=WP_000023779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=C9E93_RS08105;product=FadR/GntR family transcriptional regulator;protein_id=WP_000023779.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 58901 59476 . - . ID=gene-C9E93_RS08110;Name=C9E93_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08110;old_locus_tag=C9E93_08340 NZ_PYJV01000051.1 Protein Homology CDS 58901 59476 . - 0 ID=cds-WP_135369933.1;Parent=gene-C9E93_RS08110;Dbxref=GenBank:WP_135369933.1;Name=WP_135369933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9E93_RS08110;product=YceI family protein;protein_id=WP_135369933.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 59672 61327 . - . ID=gene-C9E93_RS08115;Name=C9E93_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08115;old_locus_tag=C9E93_08345 NZ_PYJV01000051.1 Protein Homology CDS 59672 61327 . - 0 ID=cds-WP_001081947.1;Parent=gene-C9E93_RS08115;Dbxref=GenBank:WP_001081947.1;Name=WP_001081947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9E93_RS08115;product=glucan biosynthesis protein D;protein_id=WP_001081947.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 61547 63055 . - . ID=gene-C9E93_RS08120;Name=C9E93_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08120;old_locus_tag=C9E93_08350 NZ_PYJV01000051.1 Protein Homology CDS 61547 63055 . - 0 ID=cds-WP_000933978.1;Parent=gene-C9E93_RS08120;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9E93_RS08120;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 63104 64447 . - . ID=gene-C9E93_RS08125;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=C9E93_RS08125;old_locus_tag=C9E93_08355 NZ_PYJV01000051.1 Protein Homology CDS 63104 64447 . - 0 ID=cds-WP_000024086.1;Parent=gene-C9E93_RS08125;Dbxref=GenBank:WP_000024086.1;Name=WP_000024086.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9E93_RS08125;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024086.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 64740 65663 . + . ID=gene-C9E93_RS08130;Name=C9E93_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08130;old_locus_tag=C9E93_08360 NZ_PYJV01000051.1 Protein Homology CDS 64740 65663 . + 0 ID=cds-WP_000414259.1;Parent=gene-C9E93_RS08130;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9E93_RS08130;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 65724 67349 . - . ID=gene-C9E93_RS08135;Name=C9E93_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08135;old_locus_tag=C9E93_08365 NZ_PYJV01000051.1 Protein Homology CDS 65724 67349 . - 0 ID=cds-WP_061372437.1;Parent=gene-C9E93_RS08135;Dbxref=GenBank:WP_061372437.1;Name=WP_061372437.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9E93_RS08135;product=methyl-accepting chemotaxis protein;protein_id=WP_061372437.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 67518 68636 . - . ID=gene-C9E93_RS08145;Name=C9E93_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08145;old_locus_tag=C9E93_08375 NZ_PYJV01000051.1 Protein Homology CDS 67518 68636 . - 0 ID=cds-WP_135370438.1;Parent=gene-C9E93_RS08145;Dbxref=GenBank:WP_135370438.1;Name=WP_135370438.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9E93_RS08145;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_135370438.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 68668 68943 . - . ID=gene-C9E93_RS08150;Name=C9E93_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08150;old_locus_tag=C9E93_08380 NZ_PYJV01000051.1 Protein Homology CDS 68668 68943 . - 0 ID=cds-WP_001120770.1;Parent=gene-C9E93_RS08150;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9E93_RS08150;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 69467 69868 . + . ID=gene-C9E93_RS08155;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9E93_RS08155;old_locus_tag=C9E93_08385 NZ_PYJV01000051.1 Protein Homology CDS 69467 69868 . + 0 ID=cds-WP_135370311.1;Parent=gene-C9E93_RS08155;Dbxref=GenBank:WP_135370311.1;Name=WP_135370311.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9E93_RS08155;product=type III secretion system effector SteB;protein_id=WP_135370311.1;transl_table=11 NZ_PYJV01000051.1 RefSeq gene 69991 70707 . - . ID=gene-C9E93_RS08160;Name=C9E93_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08160;old_locus_tag=C9E93_08390 NZ_PYJV01000051.1 Protein Homology CDS 69991 70707 . - 0 ID=cds-WP_001579849.1;Parent=gene-C9E93_RS08160;Dbxref=GenBank:WP_001579849.1;Name=WP_001579849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9E93_RS08160;product=hypothetical protein;protein_id=WP_001579849.1;transl_table=11 ##sequence-region NZ_PYJV01000024.1 1 168322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000024.1 RefSeq region 1 168322 . + . ID=NZ_PYJV01000024.1:1..168322;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000024.1 RefSeq gene 78 725 . - . ID=gene-C9E93_RS02835;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9E93_RS02835;old_locus_tag=C9E93_02945 NZ_PYJV01000024.1 Protein Homology CDS 78 725 . - 0 ID=cds-WP_135370628.1;Parent=gene-C9E93_RS02835;Dbxref=GenBank:WP_135370628.1;Name=WP_135370628.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9E93_RS02835;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_135370628.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 1454 2017 . + . ID=gene-C9E93_RS02845;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9E93_RS02845;old_locus_tag=C9E93_02955 NZ_PYJV01000024.1 Protein Homology CDS 1454 2017 . + 0 ID=cds-WP_000281868.1;Parent=gene-C9E93_RS02845;Dbxref=GenBank:WP_000281868.1;Name=WP_000281868.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9E93_RS02845;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281868.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 2210 2413 . - . ID=gene-C9E93_RS02850;Name=C9E93_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02850;old_locus_tag=C9E93_02960 NZ_PYJV01000024.1 Protein Homology CDS 2210 2413 . - 0 ID=cds-WP_115409496.1;Parent=gene-C9E93_RS02850;Dbxref=GenBank:WP_115409496.1;Name=WP_115409496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9E93_RS02850;product=DinI-like family protein;protein_id=WP_115409496.1;transl_table=11 NZ_PYJV01000024.1 RefSeq pseudogene 2407 2499 . - . ID=gene-C9E93_RS23830;Name=C9E93_RS23830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23830;partial=true;pseudo=true;start_range=.,2407 NZ_PYJV01000024.1 Protein Homology CDS 2407 2499 . - 0 ID=cds-C9E93_RS23830;Parent=gene-C9E93_RS23830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=C9E93_RS23830;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2407;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 2455 2531 . - . ID=gene-C9E93_RS02855;Name=C9E93_RS02855;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS02855;old_locus_tag=C9E93_02965 NZ_PYJV01000024.1 tRNAscan-SE tRNA 2455 2531 . - . ID=rna-C9E93_RS02855;Parent=gene-C9E93_RS02855;anticodon=(pos:complement(2495..2497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02855;product=tRNA-Pro NZ_PYJV01000024.1 tRNAscan-SE exon 2455 2531 . - . ID=exon-C9E93_RS02855-1;Parent=rna-C9E93_RS02855;anticodon=(pos:complement(2495..2497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02855;product=tRNA-Pro NZ_PYJV01000024.1 RefSeq gene 2605 4365 . - . ID=gene-C9E93_RS02860;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9E93_RS02860;old_locus_tag=C9E93_02970 NZ_PYJV01000024.1 Protein Homology CDS 2605 4365 . - 0 ID=cds-WP_000256153.1;Parent=gene-C9E93_RS02860;Dbxref=GenBank:WP_000256153.1;Name=WP_000256153.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9E93_RS02860;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256153.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 4397 4624 . - . ID=gene-C9E93_RS02865;Name=C9E93_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02865;old_locus_tag=C9E93_02975 NZ_PYJV01000024.1 Protein Homology CDS 4397 4624 . - 0 ID=cds-WP_001135904.1;Parent=gene-C9E93_RS02865;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9E93_RS02865;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 4804 5811 . + . ID=gene-C9E93_RS02870;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9E93_RS02870;old_locus_tag=C9E93_02980 NZ_PYJV01000024.1 Protein Homology CDS 4804 5811 . + 0 ID=cds-WP_045900582.1;Parent=gene-C9E93_RS02870;Dbxref=GenBank:WP_045900582.1;Name=WP_045900582.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9E93_RS02870;product=nucleoid-associated protein YejK;protein_id=WP_045900582.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 5839 6459 . + . ID=gene-C9E93_RS02875;Name=C9E93_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02875;old_locus_tag=C9E93_02985 NZ_PYJV01000024.1 Protein Homology CDS 5839 6459 . + 0 ID=cds-WP_000033432.1;Parent=gene-C9E93_RS02875;Dbxref=GenBank:WP_000033432.1;Name=WP_000033432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9E93_RS02875;product=hypothetical protein;protein_id=WP_000033432.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 6568 6852 . - . ID=gene-C9E93_RS02880;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9E93_RS02880;old_locus_tag=C9E93_02990 NZ_PYJV01000024.1 Protein Homology CDS 6568 6852 . - 0 ID=cds-WP_000494192.1;Parent=gene-C9E93_RS02880;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9E93_RS02880;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 6977 8737 . - . ID=gene-C9E93_RS02885;Name=C9E93_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02885;old_locus_tag=C9E93_02995 NZ_PYJV01000024.1 Protein Homology CDS 6977 8737 . - 0 ID=cds-WP_000578121.1;Parent=gene-C9E93_RS02885;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9E93_RS02885;product=DEAD/DEAH box helicase;protein_id=WP_000578121.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 8889 9584 . + . ID=gene-C9E93_RS02890;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9E93_RS02890;old_locus_tag=C9E93_03000 NZ_PYJV01000024.1 Protein Homology CDS 8889 9584 . + 0 ID=cds-WP_001234836.1;Parent=gene-C9E93_RS02890;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9E93_RS02890;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 9612 10802 . + . ID=gene-C9E93_RS02895;Name=C9E93_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02895;old_locus_tag=C9E93_03005 NZ_PYJV01000024.1 Protein Homology CDS 9612 10802 . + 0 ID=cds-WP_000213349.1;Parent=gene-C9E93_RS02895;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9E93_RS02895;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 11193 11537 . + . ID=gene-C9E93_RS02900;Name=C9E93_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02900;old_locus_tag=C9E93_03015 NZ_PYJV01000024.1 Protein Homology CDS 11193 11537 . + 0 ID=cds-WP_001094639.1;Parent=gene-C9E93_RS02900;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9E93_RS02900;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 11541 13130 . - . ID=gene-C9E93_RS02905;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=C9E93_RS02905;old_locus_tag=C9E93_03020 NZ_PYJV01000024.1 Protein Homology CDS 11541 13130 . - 0 ID=cds-WP_135370183.1;Parent=gene-C9E93_RS02905;Dbxref=GenBank:WP_135370183.1;Name=WP_135370183.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=C9E93_RS02905;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_135370183.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 13132 14157 . - . ID=gene-C9E93_RS02910;Name=C9E93_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02910;old_locus_tag=C9E93_03025 NZ_PYJV01000024.1 Protein Homology CDS 13132 14157 . - 0 ID=cds-WP_001137761.1;Parent=gene-C9E93_RS02910;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9E93_RS02910;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 14157 15251 . - . ID=gene-C9E93_RS02915;Name=C9E93_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02915;old_locus_tag=C9E93_03030 NZ_PYJV01000024.1 Protein Homology CDS 14157 15251 . - 0 ID=cds-WP_000501623.1;Parent=gene-C9E93_RS02915;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9E93_RS02915;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 15261 17066 . - . ID=gene-C9E93_RS02920;Name=C9E93_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02920;old_locus_tag=C9E93_03035 NZ_PYJV01000024.1 Protein Homology CDS 15261 17066 . - 0 ID=cds-WP_000561742.1;Parent=gene-C9E93_RS02920;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9E93_RS02920;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 17173 18729 . - . ID=gene-C9E93_RS02925;Name=C9E93_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02925;old_locus_tag=C9E93_03040 NZ_PYJV01000024.1 Protein Homology CDS 17173 18729 . - 0 ID=cds-WP_135370184.1;Parent=gene-C9E93_RS02925;Dbxref=GenBank:WP_135370184.1;Name=WP_135370184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9E93_RS02925;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135370184.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 19055 19627 . - . ID=gene-C9E93_RS02930;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9E93_RS02930;old_locus_tag=C9E93_03050 NZ_PYJV01000024.1 Protein Homology CDS 19055 19627 . - 0 ID=cds-WP_000241015.1;Parent=gene-C9E93_RS02930;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9E93_RS02930;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 20041 20760 . - . ID=gene-C9E93_RS02935;Name=C9E93_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02935;old_locus_tag=C9E93_03060 NZ_PYJV01000024.1 Protein Homology CDS 20041 20760 . - 0 ID=cds-WP_000178091.1;Parent=gene-C9E93_RS02935;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9E93_RS02935;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 20790 21776 . - . ID=gene-C9E93_RS02940;Name=C9E93_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02940;old_locus_tag=C9E93_03065 NZ_PYJV01000024.1 Protein Homology CDS 20790 21776 . - 0 ID=cds-WP_000169350.1;Parent=gene-C9E93_RS02940;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9E93_RS02940;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 21989 22561 . - . ID=gene-C9E93_RS02945;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9E93_RS02945;old_locus_tag=C9E93_03070 NZ_PYJV01000024.1 Protein Homology CDS 21989 22561 . - 0 ID=cds-WP_001136822.1;Parent=gene-C9E93_RS02945;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9E93_RS02945;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 22885 23139 . + . ID=gene-C9E93_RS02950;Name=C9E93_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02950;old_locus_tag=C9E93_03075 NZ_PYJV01000024.1 Protein Homology CDS 22885 23139 . + 0 ID=cds-WP_023209193.1;Parent=gene-C9E93_RS02950;Dbxref=GenBank:WP_023209193.1;Name=WP_023209193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9E93_RS02950;product=zinc/iron-chelating domain-containing protein;protein_id=WP_023209193.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 23527 23649 . + . ID=gene-C9E93_RS02955;Name=C9E93_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02955;old_locus_tag=C9E93_03080 NZ_PYJV01000024.1 Protein Homology CDS 23527 23649 . + 0 ID=cds-WP_001519564.1;Parent=gene-C9E93_RS02955;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9E93_RS02955;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 23651 24316 . + . ID=gene-C9E93_RS02960;Name=C9E93_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02960;old_locus_tag=C9E93_03085 NZ_PYJV01000024.1 Protein Homology CDS 23651 24316 . + 0 ID=cds-WP_135370516.1;Parent=gene-C9E93_RS02960;Dbxref=GenBank:WP_135370516.1;Name=WP_135370516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9E93_RS02960;product=GNVR domain-containing protein;protein_id=WP_135370516.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 24381 25562 . - . ID=gene-C9E93_RS02965;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9E93_RS02965;old_locus_tag=C9E93_03090 NZ_PYJV01000024.1 Protein Homology CDS 24381 25562 . - 0 ID=cds-WP_000551934.1;Parent=gene-C9E93_RS02965;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9E93_RS02965;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 25931 27061 . + . ID=gene-C9E93_RS02970;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9E93_RS02970;old_locus_tag=C9E93_03095 NZ_PYJV01000024.1 Protein Homology CDS 25931 27061 . + 0 ID=cds-WP_000487280.1;Parent=gene-C9E93_RS02970;Dbxref=GenBank:WP_000487280.1;Name=WP_000487280.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9E93_RS02970;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487280.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 27061 27999 . + . ID=gene-C9E93_RS02975;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9E93_RS02975;old_locus_tag=C9E93_03100 NZ_PYJV01000024.1 Protein Homology CDS 27061 27999 . + 0 ID=cds-WP_000091249.1;Parent=gene-C9E93_RS02975;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9E93_RS02975;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 28016 29698 . + . ID=gene-C9E93_RS02980;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=C9E93_RS02980;old_locus_tag=C9E93_03105 NZ_PYJV01000024.1 Protein Homology CDS 28016 29698 . + 0 ID=cds-WP_001749130.1;Parent=gene-C9E93_RS02980;Dbxref=GenBank:WP_001749130.1;Name=WP_001749130.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9E93_RS02980;product=PTS fructose transporter subunit IIBC;protein_id=WP_001749130.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 29763 30620 . - . ID=gene-C9E93_RS02985;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9E93_RS02985;old_locus_tag=C9E93_03110 NZ_PYJV01000024.1 Protein Homology CDS 29763 30620 . - 0 ID=cds-WP_000873906.1;Parent=gene-C9E93_RS02985;Dbxref=GenBank:WP_000873906.1;Name=WP_000873906.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9E93_RS02985;product=deoxyribonuclease IV;protein_id=WP_000873906.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 30699 31748 . - . ID=gene-C9E93_RS02990;Name=C9E93_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02990;old_locus_tag=C9E93_03115 NZ_PYJV01000024.1 Protein Homology CDS 30699 31748 . - 0 ID=cds-WP_000137966.1;Parent=gene-C9E93_RS02990;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9E93_RS02990;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 31869 32732 . + . ID=gene-C9E93_RS02995;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9E93_RS02995;old_locus_tag=C9E93_03120 NZ_PYJV01000024.1 Protein Homology CDS 31869 32732 . + 0 ID=cds-WP_000548316.1;Parent=gene-C9E93_RS02995;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9E93_RS02995;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 32922 34391 . + . ID=gene-C9E93_RS03000;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=C9E93_RS03000;old_locus_tag=C9E93_03125 NZ_PYJV01000024.1 Protein Homology CDS 32922 34391 . + 0 ID=cds-WP_000535000.1;Parent=gene-C9E93_RS03000;Dbxref=GenBank:WP_000535000.1;Name=WP_000535000.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9E93_RS03000;product=lysine-specific permease;protein_id=WP_000535000.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 34738 36729 . + . ID=gene-C9E93_RS03010;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9E93_RS03010;old_locus_tag=C9E93_03135 NZ_PYJV01000024.1 Protein Homology CDS 34738 36729 . + 0 ID=cds-WP_000488252.1;Parent=gene-C9E93_RS03010;Dbxref=GenBank:WP_000488252.1;Name=WP_000488252.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9E93_RS03010;product=catecholate siderophore receptor CirA;protein_id=WP_000488252.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 36773 38095 . - . ID=gene-C9E93_RS03015;Name=C9E93_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03015;old_locus_tag=C9E93_03140 NZ_PYJV01000024.1 Protein Homology CDS 36773 38095 . - 0 ID=cds-WP_000023807.1;Parent=gene-C9E93_RS03015;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9E93_RS03015;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 38128 39015 . - . ID=gene-C9E93_RS03020;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E93_RS03020;old_locus_tag=C9E93_03145 NZ_PYJV01000024.1 Protein Homology CDS 38128 39015 . - 0 ID=cds-WP_058108583.1;Parent=gene-C9E93_RS03020;Dbxref=GenBank:WP_058108583.1;Name=WP_058108583.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9E93_RS03020;product=phosphoserine phosphatase SerB;protein_id=WP_058108583.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 39232 40599 . + . ID=gene-C9E93_RS03025;Name=C9E93_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03025;old_locus_tag=C9E93_03150 NZ_PYJV01000024.1 Protein Homology CDS 39232 40599 . + 0 ID=cds-WP_023201132.1;Parent=gene-C9E93_RS03025;Dbxref=GenBank:WP_023201132.1;Name=WP_023201132.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9E93_RS03025;product=L-serine ammonia-lyase;protein_id=WP_023201132.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 40604 40993 . + . ID=gene-C9E93_RS03030;Name=C9E93_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03030;old_locus_tag=C9E93_03155 NZ_PYJV01000024.1 Protein Homology CDS 40604 40993 . + 0 ID=cds-WP_000876817.1;Parent=gene-C9E93_RS03030;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9E93_RS03030;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 40982 41839 . - . ID=gene-C9E93_RS03035;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9E93_RS03035;old_locus_tag=C9E93_03160 NZ_PYJV01000024.1 Protein Homology CDS 40982 41839 . - 0 ID=cds-WP_135370460.1;Parent=gene-C9E93_RS03035;Dbxref=GenBank:WP_135370460.1;Name=WP_135370460.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9E93_RS03035;product=S-formylglutathione hydrolase;protein_id=WP_135370460.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 42169 42837 . + . ID=gene-C9E93_RS03040;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9E93_RS03040;old_locus_tag=C9E93_03170 NZ_PYJV01000024.1 Protein Homology CDS 42169 42837 . + 0 ID=cds-WP_001139611.1;Parent=gene-C9E93_RS03040;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9E93_RS03040;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 42852 43994 . + . ID=gene-C9E93_RS03045;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=C9E93_RS03045;old_locus_tag=C9E93_03175 NZ_PYJV01000024.1 Protein Homology CDS 42852 43994 . + 0 ID=cds-WP_001518079.1;Parent=gene-C9E93_RS03045;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9E93_RS03045;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 44144 45166 . + . ID=gene-C9E93_RS03050;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9E93_RS03050;old_locus_tag=C9E93_03180 NZ_PYJV01000024.1 Protein Homology CDS 44144 45166 . + 0 ID=cds-WP_000628634.1;Parent=gene-C9E93_RS03050;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9E93_RS03050;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 45665 46663 . + . ID=gene-C9E93_RS03055;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=C9E93_RS03055;old_locus_tag=C9E93_03185 NZ_PYJV01000024.1 Protein Homology CDS 45665 46663 . + 0 ID=cds-WP_023238532.1;Parent=gene-C9E93_RS03055;Dbxref=GenBank:WP_023238532.1;Name=WP_023238532.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9E93_RS03055;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_023238532.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 46797 48317 . + . ID=gene-C9E93_RS03060;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=C9E93_RS03060;old_locus_tag=C9E93_03190 NZ_PYJV01000024.1 Protein Homology CDS 46797 48317 . + 0 ID=cds-WP_000535913.1;Parent=gene-C9E93_RS03060;Dbxref=GenBank:WP_000535913.1;Name=WP_000535913.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9E93_RS03060;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535913.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 48333 49343 . + . ID=gene-C9E93_RS03065;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9E93_RS03065;old_locus_tag=C9E93_03195 NZ_PYJV01000024.1 Protein Homology CDS 48333 49343 . + 0 ID=cds-WP_001275101.1;Parent=gene-C9E93_RS03065;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9E93_RS03065;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 49418 50653 . - . ID=gene-C9E93_RS03070;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9E93_RS03070;old_locus_tag=C9E93_03200 NZ_PYJV01000024.1 Protein Homology CDS 49418 50653 . - 0 ID=cds-WP_000956095.1;Parent=gene-C9E93_RS03070;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9E93_RS03070;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 50647 51888 . - . ID=gene-C9E93_RS03075;Name=C9E93_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03075;old_locus_tag=C9E93_03205 NZ_PYJV01000024.1 Protein Homology CDS 50647 51888 . - 0 ID=cds-WP_135370461.1;Parent=gene-C9E93_RS03075;Dbxref=GenBank:WP_135370461.1;Name=WP_135370461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9E93_RS03075;product=NAD(P)-dependent oxidoreductase;protein_id=WP_135370461.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 52093 52338 . - . ID=gene-C9E93_RS03080;Name=C9E93_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03080;old_locus_tag=C9E93_03210 NZ_PYJV01000024.1 Protein Homology CDS 52093 52338 . - 0 ID=cds-WP_000605187.1;Parent=gene-C9E93_RS03080;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9E93_RS03080;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 52335 53054 . - . ID=gene-C9E93_RS03085;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9E93_RS03085;old_locus_tag=C9E93_03215 NZ_PYJV01000024.1 Protein Homology CDS 52335 53054 . - 0 ID=cds-WP_000920081.1;Parent=gene-C9E93_RS03085;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9E93_RS03085;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 53231 54115 . - . ID=gene-C9E93_RS03090;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9E93_RS03090;old_locus_tag=C9E93_03220 NZ_PYJV01000024.1 Protein Homology CDS 53231 54115 . - 0 ID=cds-WP_000553526.1;Parent=gene-C9E93_RS03090;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9E93_RS03090;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 54269 54964 . - . ID=gene-C9E93_RS03095;Name=C9E93_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03095;old_locus_tag=C9E93_03225 NZ_PYJV01000024.1 Protein Homology CDS 54269 54964 . - 0 ID=cds-WP_135370462.1;Parent=gene-C9E93_RS03095;Dbxref=GenBank:WP_135370462.1;Name=WP_135370462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9E93_RS03095;product=CidB/LrgB family autolysis modulator;protein_id=WP_135370462.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 54961 55359 . - . ID=gene-C9E93_RS03100;Name=C9E93_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03100;old_locus_tag=C9E93_03230 NZ_PYJV01000024.1 Protein Homology CDS 54961 55359 . - 0 ID=cds-WP_000045719.1;Parent=gene-C9E93_RS03100;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9E93_RS03100;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 55491 56399 . - . ID=gene-C9E93_RS03105;Name=C9E93_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03105;old_locus_tag=C9E93_03235 NZ_PYJV01000024.1 Protein Homology CDS 55491 56399 . - 0 ID=cds-WP_000024658.1;Parent=gene-C9E93_RS03105;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9E93_RS03105;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 56525 57883 . + . ID=gene-C9E93_RS03110;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=C9E93_RS03110;old_locus_tag=C9E93_03240 NZ_PYJV01000024.1 Protein Homology CDS 56525 57883 . + 0 ID=cds-WP_023201136.1;Parent=gene-C9E93_RS03110;Dbxref=GenBank:WP_023201136.1;Name=WP_023201136.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9E93_RS03110;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_023201136.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 57895 58932 . + . ID=gene-C9E93_RS03115;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9E93_RS03115;old_locus_tag=C9E93_03245 NZ_PYJV01000024.1 Protein Homology CDS 57895 58932 . + 0 ID=cds-WP_001289857.1;Parent=gene-C9E93_RS03115;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9E93_RS03115;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 58950 59651 . + . ID=gene-C9E93_RS03120;Name=C9E93_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03120;old_locus_tag=C9E93_03250 NZ_PYJV01000024.1 Protein Homology CDS 58950 59651 . + 0 ID=cds-WP_000170621.1;Parent=gene-C9E93_RS03120;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9E93_RS03120;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 59660 60304 . + . ID=gene-C9E93_RS03125;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9E93_RS03125;old_locus_tag=C9E93_03255 NZ_PYJV01000024.1 Protein Homology CDS 59660 60304 . + 0 ID=cds-WP_000781195.1;Parent=gene-C9E93_RS03125;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9E93_RS03125;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 60319 61512 . + . ID=gene-C9E93_RS03130;Name=C9E93_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03130;old_locus_tag=C9E93_03260 NZ_PYJV01000024.1 Protein Homology CDS 60319 61512 . + 0 ID=cds-WP_000150103.1;Parent=gene-C9E93_RS03130;Dbxref=GenBank:WP_000150103.1;Name=WP_000150103.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9E93_RS03130;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150103.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 61621 62559 . + . ID=gene-C9E93_RS03135;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=C9E93_RS03135;old_locus_tag=C9E93_03265 NZ_PYJV01000024.1 Protein Homology CDS 61621 62559 . + 0 ID=cds-WP_001264832.1;Parent=gene-C9E93_RS03135;Dbxref=GenBank:WP_001264832.1;Name=WP_001264832.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9E93_RS03135;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264832.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 62617 62700 . - . ID=gene-C9E93_RS24055;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=C9E93_RS24055;old_locus_tag=C9E93_03270 NZ_PYJV01000024.1 Protein Homology CDS 62617 62700 . - 0 ID=cds-WP_000698460.1;Parent=gene-C9E93_RS24055;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=C9E93_RS24055;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 63018 64454 . + . ID=gene-C9E93_RS03145;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9E93_RS03145;old_locus_tag=C9E93_03275 NZ_PYJV01000024.1 Protein Homology CDS 63018 64454 . + 0 ID=cds-WP_001081457.1;Parent=gene-C9E93_RS03145;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9E93_RS03145;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 64520 65281 . + . ID=gene-C9E93_RS03150;Name=C9E93_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03150;old_locus_tag=C9E93_03280 NZ_PYJV01000024.1 Protein Homology CDS 64520 65281 . + 0 ID=cds-WP_000169608.1;Parent=gene-C9E93_RS03150;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9E93_RS03150;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 65330 65899 . - . ID=gene-C9E93_RS03155;Name=C9E93_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03155;old_locus_tag=C9E93_03285 NZ_PYJV01000024.1 Protein Homology CDS 65330 65899 . - 0 ID=cds-WP_001523476.1;Parent=gene-C9E93_RS03155;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9E93_RS03155;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 66058 66645 . + . ID=gene-C9E93_RS03160;Name=C9E93_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03160;old_locus_tag=C9E93_03290 NZ_PYJV01000024.1 Protein Homology CDS 66058 66645 . + 0 ID=cds-WP_001017057.1;Parent=gene-C9E93_RS03160;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9E93_RS03160;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 66811 67758 . + . ID=gene-C9E93_RS03165;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9E93_RS03165;old_locus_tag=C9E93_03300 NZ_PYJV01000024.1 Protein Homology CDS 66811 67758 . + 0 ID=cds-WP_000911555.1;Parent=gene-C9E93_RS03165;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9E93_RS03165;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 67817 69547 . - . ID=gene-C9E93_RS03170;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9E93_RS03170;old_locus_tag=C9E93_03305 NZ_PYJV01000024.1 Protein Homology CDS 67817 69547 . - 0 ID=cds-WP_135370463.1;Parent=gene-C9E93_RS03170;Dbxref=GenBank:WP_135370463.1;Name=WP_135370463.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9E93_RS03170;product=D-lactate dehydrogenase;protein_id=WP_135370463.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 69814 72111 . + . ID=gene-C9E93_RS03175;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9E93_RS03175;old_locus_tag=C9E93_03310 NZ_PYJV01000024.1 Protein Homology CDS 69814 72111 . + 0 ID=cds-WP_000871554.1;Parent=gene-C9E93_RS03175;Dbxref=GenBank:WP_000871554.1;Name=WP_000871554.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9E93_RS03175;product=beta-glucosidase BglX;protein_id=WP_000871554.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 72292 73209 . + . ID=gene-C9E93_RS03180;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=C9E93_RS03180;old_locus_tag=C9E93_03315 NZ_PYJV01000024.1 Protein Homology CDS 72292 73209 . + 0 ID=cds-WP_000155876.1;Parent=gene-C9E93_RS03180;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9E93_RS03180;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 73213 74382 . + . ID=gene-C9E93_RS03185;Name=C9E93_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03185;old_locus_tag=C9E93_03320 NZ_PYJV01000024.1 Protein Homology CDS 73213 74382 . + 0 ID=cds-WP_001278121.1;Parent=gene-C9E93_RS03185;Dbxref=GenBank:WP_001278121.1;Name=WP_001278121.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9E93_RS03185;product=ABC transporter permease;protein_id=WP_001278121.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 74375 75322 . + . ID=gene-C9E93_RS03190;Name=C9E93_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03190;old_locus_tag=C9E93_03325 NZ_PYJV01000024.1 Protein Homology CDS 74375 75322 . + 0 ID=cds-WP_135370464.1;Parent=gene-C9E93_RS03190;Dbxref=GenBank:WP_135370464.1;Name=WP_135370464.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9E93_RS03190;product=ABC transporter ATP-binding protein;protein_id=WP_135370464.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 75306 76037 . + . ID=gene-C9E93_RS03195;Name=C9E93_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03195;old_locus_tag=C9E93_03330 NZ_PYJV01000024.1 Protein Homology CDS 75306 76037 . + 0 ID=cds-WP_000824854.1;Parent=gene-C9E93_RS03195;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9E93_RS03195;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 76018 76125 . - . ID=gene-C9E93_RS03200;Name=C9E93_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03200;old_locus_tag=C9E93_03335 NZ_PYJV01000024.1 Protein Homology CDS 76018 76125 . - 0 ID=cds-WP_001261696.1;Parent=gene-C9E93_RS03200;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9E93_RS03200;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 76185 76916 . - . ID=gene-C9E93_RS03205;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9E93_RS03205;old_locus_tag=C9E93_03340 NZ_PYJV01000024.1 Protein Homology CDS 76185 76916 . - 0 ID=cds-WP_001240418.1;Parent=gene-C9E93_RS03205;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9E93_RS03205;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 77139 78824 . + . ID=gene-C9E93_RS03210;Name=C9E93_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03210;old_locus_tag=C9E93_03345 NZ_PYJV01000024.1 Protein Homology CDS 77139 78824 . + 0 ID=cds-WP_000272850.1;Parent=gene-C9E93_RS03210;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9E93_RS03210;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 78821 79540 . + . ID=gene-C9E93_RS03215;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9E93_RS03215;old_locus_tag=C9E93_03350 NZ_PYJV01000024.1 Protein Homology CDS 78821 79540 . + 0 ID=cds-WP_000598637.1;Parent=gene-C9E93_RS03215;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9E93_RS03215;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 79587 80054 . + . ID=gene-C9E93_RS03220;Name=C9E93_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03220;old_locus_tag=C9E93_03355 NZ_PYJV01000024.1 Protein Homology CDS 79587 80054 . + 0 ID=cds-WP_000950413.1;Parent=gene-C9E93_RS03220;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9E93_RS03220;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 80111 80641 . - . ID=gene-C9E93_RS03225;Name=C9E93_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03225;old_locus_tag=C9E93_03360 NZ_PYJV01000024.1 Protein Homology CDS 80111 80641 . - 0 ID=cds-WP_135370465.1;Parent=gene-C9E93_RS03225;Dbxref=GenBank:WP_135370465.1;Name=WP_135370465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9E93_RS03225;product=YehR family lipoprotein;protein_id=WP_135370465.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 80813 81271 . - . ID=gene-C9E93_RS03230;Name=C9E93_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03230;old_locus_tag=C9E93_03365 NZ_PYJV01000024.1 Protein Homology CDS 80813 81271 . - 0 ID=cds-WP_000703137.1;Parent=gene-C9E93_RS03230;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9E93_RS03230;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 81512 83545 . - . ID=gene-C9E93_RS03235;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9E93_RS03235;old_locus_tag=C9E93_03370 NZ_PYJV01000024.1 Protein Homology CDS 81512 83545 . - 0 ID=cds-WP_000195334.1;Parent=gene-C9E93_RS03235;Dbxref=GenBank:WP_000195334.1;Name=WP_000195334.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9E93_RS03235;product=methionine--tRNA ligase;protein_id=WP_000195334.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 83710 84819 . + . ID=gene-C9E93_RS03240;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9E93_RS03240;old_locus_tag=C9E93_03375 NZ_PYJV01000024.1 Protein Homology CDS 83710 84819 . + 0 ID=cds-WP_001005424.1;Parent=gene-C9E93_RS03240;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9E93_RS03240;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 85097 85378 . + . ID=gene-C9E93_RS03245;Name=C9E93_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03245;old_locus_tag=C9E93_03380 NZ_PYJV01000024.1 Protein Homology CDS 85097 85378 . + 0 ID=cds-WP_135370039.1;Parent=gene-C9E93_RS03245;Dbxref=GenBank:WP_135370039.1;Name=WP_135370039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=C9E93_RS03245;product=DUF2574 family protein;protein_id=WP_135370039.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 85657 86190 . + . ID=gene-C9E93_RS03250;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=C9E93_RS03250;old_locus_tag=C9E93_03385 NZ_PYJV01000024.1 Protein Homology CDS 85657 86190 . + 0 ID=cds-WP_135370040.1;Parent=gene-C9E93_RS03250;Dbxref=GenBank:WP_135370040.1;Name=WP_135370040.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=C9E93_RS03250;product=fimbrial protein YehD;protein_id=WP_135370040.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 86252 86932 . + . ID=gene-C9E93_RS03255;Name=C9E93_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03255;old_locus_tag=C9E93_03390 NZ_PYJV01000024.1 Protein Homology CDS 86252 86932 . + 0 ID=cds-WP_023232020.1;Parent=gene-C9E93_RS03255;Dbxref=GenBank:WP_023232020.1;Name=WP_023232020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=C9E93_RS03255;product=fimbrial assembly chaperone;protein_id=WP_023232020.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 86961 89447 . + . ID=gene-C9E93_RS03260;Name=C9E93_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03260;old_locus_tag=C9E93_03395 NZ_PYJV01000024.1 Protein Homology CDS 86961 89447 . + 0 ID=cds-WP_023232019.1;Parent=gene-C9E93_RS03260;Dbxref=GenBank:WP_023232019.1;Name=WP_023232019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=C9E93_RS03260;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023232019.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 89463 90485 . + . ID=gene-C9E93_RS03265;Name=C9E93_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03265;old_locus_tag=C9E93_03400 NZ_PYJV01000024.1 Protein Homology CDS 89463 90485 . + 0 ID=cds-WP_048348881.1;Parent=gene-C9E93_RS03265;Dbxref=GenBank:WP_048348881.1;Name=WP_048348881.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=C9E93_RS03265;product=fimbrial protein;protein_id=WP_048348881.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 90529 90843 . - . ID=gene-C9E93_RS03270;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9E93_RS03270;old_locus_tag=C9E93_03405 NZ_PYJV01000024.1 Protein Homology CDS 90529 90843 . - 0 ID=cds-WP_000837534.1;Parent=gene-C9E93_RS03270;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9E93_RS03270;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_PYJV01000024.1 cmsearch riboswitch 91125 91221 . + . ID=id-NZ_PYJV01000024.1:91125..91221;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000024.1 RefSeq gene 91253 92050 . + . ID=gene-C9E93_RS03275;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9E93_RS03275;old_locus_tag=C9E93_03410 NZ_PYJV01000024.1 Protein Homology CDS 91253 92050 . + 0 ID=cds-WP_039519582.1;Parent=gene-C9E93_RS03275;Dbxref=GenBank:WP_039519582.1;Name=WP_039519582.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9E93_RS03275;product=hydroxyethylthiazole kinase;protein_id=WP_039519582.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 92037 92837 . + . ID=gene-C9E93_RS03280;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9E93_RS03280;old_locus_tag=C9E93_03415 NZ_PYJV01000024.1 Protein Homology CDS 92037 92837 . + 0 ID=cds-WP_001188957.1;Parent=gene-C9E93_RS03280;Dbxref=GenBank:WP_001188957.1;Name=WP_001188957.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9E93_RS03280;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188957.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 92873 93619 . + . ID=gene-C9E93_RS03285;Name=C9E93_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03285;old_locus_tag=C9E93_03420 NZ_PYJV01000024.1 Protein Homology CDS 92873 93619 . + 0 ID=cds-WP_000434062.1;Parent=gene-C9E93_RS03285;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9E93_RS03285;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 93593 94558 . - . ID=gene-C9E93_RS03290;Name=C9E93_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03290;old_locus_tag=C9E93_03425 NZ_PYJV01000024.1 Protein Homology CDS 93593 94558 . - 0 ID=cds-WP_135370041.1;Parent=gene-C9E93_RS03290;Dbxref=GenBank:WP_135370041.1;Name=WP_135370041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9E93_RS03290;product=PfkB family carbohydrate kinase;protein_id=WP_135370041.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 94555 95559 . - . ID=gene-C9E93_RS03295;Name=C9E93_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03295;old_locus_tag=C9E93_03430 NZ_PYJV01000024.1 Protein Homology CDS 94555 95559 . - 0 ID=cds-WP_000642793.1;Parent=gene-C9E93_RS03295;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9E93_RS03295;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 95556 96827 . - . ID=gene-C9E93_RS03300;Name=C9E93_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03300;old_locus_tag=C9E93_03435 NZ_PYJV01000024.1 Protein Homology CDS 95556 96827 . - 0 ID=cds-WP_000858692.1;Parent=gene-C9E93_RS03300;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9E93_RS03300;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 97081 98133 . + . ID=gene-C9E93_RS03305;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9E93_RS03305;old_locus_tag=C9E93_03440 NZ_PYJV01000024.1 Protein Homology CDS 97081 98133 . + 0 ID=cds-WP_000129590.1;Parent=gene-C9E93_RS03305;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9E93_RS03305;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 98186 99085 . - . ID=gene-C9E93_RS03310;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9E93_RS03310;old_locus_tag=C9E93_03445 NZ_PYJV01000024.1 Protein Homology CDS 98186 99085 . - 0 ID=cds-WP_001273393.1;Parent=gene-C9E93_RS03310;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9E93_RS03310;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 99650 99985 . + . ID=gene-C9E93_RS03315;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9E93_RS03315;old_locus_tag=C9E93_03450 NZ_PYJV01000024.1 Protein Homology CDS 99650 99985 . + 0 ID=cds-WP_006497691.1;Parent=gene-C9E93_RS03315;Dbxref=GenBank:WP_006497691.1;Name=WP_006497691.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9E93_RS03315;product=type III secretion system effector SteD;protein_id=WP_006497691.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 100107 100523 . + . ID=gene-C9E93_RS03320;Name=C9E93_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03320;old_locus_tag=C9E93_03455 NZ_PYJV01000024.1 Protein Homology CDS 100107 100523 . + 0 ID=cds-WP_001555792.1;Parent=gene-C9E93_RS03320;Dbxref=GenBank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9E93_RS03320;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 100559 101605 . - . ID=gene-C9E93_RS03325;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9E93_RS03325;old_locus_tag=C9E93_03460 NZ_PYJV01000024.1 Protein Homology CDS 100559 101605 . - 0 ID=cds-WP_135400584.1;Parent=gene-C9E93_RS03325;Dbxref=GenBank:WP_135400584.1;Name=WP_135400584.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9E93_RS03325;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_135400584.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 102057 103418 . - . ID=gene-C9E93_RS03330;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=C9E93_RS03330;old_locus_tag=C9E93_03465 NZ_PYJV01000024.1 Protein Homology CDS 102057 103418 . - 0 ID=cds-WP_001517981.1;Parent=gene-C9E93_RS03330;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9E93_RS03330;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_001517981.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 103534 105645 . - . ID=gene-C9E93_RS03335;Name=C9E93_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03335;old_locus_tag=C9E93_03470 NZ_PYJV01000024.1 Protein Homology CDS 103534 105645 . - 0 ID=cds-WP_135370431.1;Parent=gene-C9E93_RS03335;Dbxref=GenBank:WP_135370431.1;Name=WP_135370431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9E93_RS03335;product=DUF4034 domain-containing protein;protein_id=WP_135370431.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 105656 106372 . - . ID=gene-C9E93_RS03340;Name=C9E93_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03340;old_locus_tag=C9E93_03475 NZ_PYJV01000024.1 Protein Homology CDS 105656 106372 . - 0 ID=cds-WP_000498586.1;Parent=gene-C9E93_RS03340;Dbxref=GenBank:WP_000498586.1;Name=WP_000498586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9E93_RS03340;product=DUF1266 domain-containing protein;protein_id=WP_000498586.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 106372 107574 . - . ID=gene-C9E93_RS03345;Name=C9E93_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03345;old_locus_tag=C9E93_03480 NZ_PYJV01000024.1 Protein Homology CDS 106372 107574 . - 0 ID=cds-WP_167851648.1;Parent=gene-C9E93_RS03345;Dbxref=GenBank:WP_167851648.1;Name=WP_167851648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9E93_RS03345;product=cytoplasmic protein;protein_id=WP_167851648.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 107844 108566 . - . ID=gene-C9E93_RS03355;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=C9E93_RS03355;old_locus_tag=C9E93_03490 NZ_PYJV01000024.1 Protein Homology CDS 107844 108566 . - 0 ID=cds-WP_000137854.1;Parent=gene-C9E93_RS03355;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9E93_RS03355;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 108563 109966 . - . ID=gene-C9E93_RS03360;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9E93_RS03360;old_locus_tag=C9E93_03495 NZ_PYJV01000024.1 Protein Homology CDS 108563 109966 . - 0 ID=cds-WP_000870073.1;Parent=gene-C9E93_RS03360;Dbxref=GenBank:WP_000870073.1;Name=WP_000870073.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9E93_RS03360;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870073.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 109966 111378 . - . ID=gene-C9E93_RS03365;Name=C9E93_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03365;old_locus_tag=C9E93_03500 NZ_PYJV01000024.1 Protein Homology CDS 109966 111378 . - 0 ID=cds-WP_000137818.1;Parent=gene-C9E93_RS03365;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9E93_RS03365;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 111375 114455 . - . ID=gene-C9E93_RS03370;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9E93_RS03370;old_locus_tag=C9E93_03505 NZ_PYJV01000024.1 Protein Homology CDS 111375 114455 . - 0 ID=cds-WP_020839224.1;Parent=gene-C9E93_RS03370;Dbxref=GenBank:WP_020839224.1;Name=WP_020839224.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9E93_RS03370;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_020839224.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 114456 117578 . - . ID=gene-C9E93_RS03375;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=C9E93_RS03375;old_locus_tag=C9E93_03510 NZ_PYJV01000024.1 Protein Homology CDS 114456 117578 . - 0 ID=cds-WP_135370397.1;Parent=gene-C9E93_RS03375;Dbxref=GenBank:WP_135370397.1;Name=WP_135370397.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9E93_RS03375;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_135370397.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 117578 118819 . - . ID=gene-C9E93_RS03380;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=C9E93_RS03380;old_locus_tag=C9E93_03515 NZ_PYJV01000024.1 Protein Homology CDS 117578 118819 . - 0 ID=cds-WP_000678819.1;Parent=gene-C9E93_RS03380;Dbxref=GenBank:WP_000678819.1;Name=WP_000678819.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9E93_RS03380;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678819.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 119102 119161 . + . ID=gene-C9E93_RS03385;Name=C9E93_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03385 NZ_PYJV01000024.1 Protein Homology CDS 119102 119161 . + 0 ID=cds-WP_105887528.1;Parent=gene-C9E93_RS03385;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9E93_RS03385;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 119260 120612 . - . ID=gene-C9E93_RS03390;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9E93_RS03390;old_locus_tag=C9E93_03520 NZ_PYJV01000024.1 Protein Homology CDS 119260 120612 . - 0 ID=cds-WP_000469628.1;Parent=gene-C9E93_RS03390;Dbxref=GenBank:WP_000469628.1;Name=WP_000469628.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9E93_RS03390;product=molecular chaperone;protein_id=WP_000469628.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 120746 121615 . + . ID=gene-C9E93_RS03395;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9E93_RS03395;old_locus_tag=C9E93_03530 NZ_PYJV01000024.1 Protein Homology CDS 120746 121615 . + 0 ID=cds-WP_000494703.1;Parent=gene-C9E93_RS03395;Dbxref=GenBank:WP_000494703.1;Name=WP_000494703.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9E93_RS03395;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494703.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 121583 124573 . - . ID=gene-C9E93_RS03400;Name=C9E93_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03400;old_locus_tag=C9E93_03535 NZ_PYJV01000024.1 Protein Homology CDS 121583 124573 . - 0 ID=cds-WP_135370396.1;Parent=gene-C9E93_RS03400;Dbxref=GenBank:WP_135370396.1;Name=WP_135370396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9E93_RS03400;product=MASE1 domain-containing protein;protein_id=WP_135370396.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 124904 125545 . + . ID=gene-C9E93_RS03405;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9E93_RS03405;old_locus_tag=C9E93_03540 NZ_PYJV01000024.1 Protein Homology CDS 124904 125545 . + 0 ID=cds-WP_000132082.1;Parent=gene-C9E93_RS03405;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9E93_RS03405;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 125636 126217 . + . ID=gene-C9E93_RS03410;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9E93_RS03410;old_locus_tag=C9E93_03545 NZ_PYJV01000024.1 Protein Homology CDS 125636 126217 . + 0 ID=cds-WP_001234783.1;Parent=gene-C9E93_RS03410;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9E93_RS03410;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 126256 128112 . + . ID=gene-C9E93_RS03415;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9E93_RS03415;old_locus_tag=C9E93_03550 NZ_PYJV01000024.1 Protein Homology CDS 126256 128112 . + 0 ID=cds-WP_023206604.1;Parent=gene-C9E93_RS03415;Dbxref=GenBank:WP_023206604.1;Name=WP_023206604.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9E93_RS03415;product=outer membrane assembly protein AsmA;protein_id=WP_023206604.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 128198 129778 . - . ID=gene-C9E93_RS03420;Name=C9E93_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03420;old_locus_tag=C9E93_03555 NZ_PYJV01000024.1 Protein Homology CDS 128198 129778 . - 0 ID=cds-WP_000454713.1;Parent=gene-C9E93_RS03420;Dbxref=GenBank:WP_000454713.1;Name=WP_000454713.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9E93_RS03420;product=TerC family protein;protein_id=WP_000454713.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 130453 131592 . + . ID=gene-C9E93_RS03425;Name=C9E93_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03425;old_locus_tag=C9E93_03565 NZ_PYJV01000024.1 Protein Homology CDS 130453 131592 . + 0 ID=cds-WP_000978077.1;Parent=gene-C9E93_RS03425;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9E93_RS03425;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 131598 132047 . + . ID=gene-C9E93_RS03430;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9E93_RS03430;old_locus_tag=C9E93_03570 NZ_PYJV01000024.1 Protein Homology CDS 131598 132047 . + 0 ID=cds-WP_000482224.1;Parent=gene-C9E93_RS03430;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9E93_RS03430;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 132044 134203 . + . ID=gene-C9E93_RS03435;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9E93_RS03435;old_locus_tag=C9E93_03575 NZ_PYJV01000024.1 Protein Homology CDS 132044 134203 . + 0 ID=cds-WP_135370395.1;Parent=gene-C9E93_RS03435;Dbxref=GenBank:WP_135370395.1;Name=WP_135370395.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9E93_RS03435;product=tyrosine-protein kinase Wzc;protein_id=WP_135370395.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 134290 135132 . + . ID=gene-C9E93_RS03440;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9E93_RS03440;old_locus_tag=C9E93_03580 NZ_PYJV01000024.1 Protein Homology CDS 134290 135132 . + 0 ID=cds-WP_000205695.1;Parent=gene-C9E93_RS03440;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9E93_RS03440;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 135135 135623 . + . ID=gene-C9E93_RS03445;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=C9E93_RS03445;old_locus_tag=C9E93_03585 NZ_PYJV01000024.1 Protein Homology CDS 135135 135623 . + 0 ID=cds-WP_000888724.1;Parent=gene-C9E93_RS03445;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=C9E93_RS03445;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 135620 136837 . + . ID=gene-C9E93_RS03450;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9E93_RS03450;old_locus_tag=C9E93_03590 NZ_PYJV01000024.1 Protein Homology CDS 135620 136837 . + 0 ID=cds-WP_135370394.1;Parent=gene-C9E93_RS03450;Dbxref=GenBank:WP_135370394.1;Name=WP_135370394.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9E93_RS03450;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_135370394.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 136812 138026 . + . ID=gene-C9E93_RS03455;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9E93_RS03455;old_locus_tag=C9E93_03595 NZ_PYJV01000024.1 Protein Homology CDS 136812 138026 . + 0 ID=cds-WP_000091397.1;Parent=gene-C9E93_RS03455;Dbxref=GenBank:WP_000091397.1;Name=WP_000091397.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9E93_RS03455;product=colanic acid polymerase WcaD;protein_id=WP_000091397.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 138039 138785 . + . ID=gene-C9E93_RS03460;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9E93_RS03460;old_locus_tag=C9E93_03600 NZ_PYJV01000024.1 Protein Homology CDS 138039 138785 . + 0 ID=cds-WP_135370393.1;Parent=gene-C9E93_RS03460;Dbxref=GenBank:WP_135370393.1;Name=WP_135370393.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9E93_RS03460;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_135370393.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 138801 139355 . + . ID=gene-C9E93_RS03465;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9E93_RS03465;old_locus_tag=C9E93_03605 NZ_PYJV01000024.1 Protein Homology CDS 138801 139355 . + 0 ID=cds-WP_001153603.1;Parent=gene-C9E93_RS03465;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9E93_RS03465;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 139379 140500 . + . ID=gene-C9E93_RS03470;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9E93_RS03470;old_locus_tag=C9E93_03610 NZ_PYJV01000024.1 Protein Homology CDS 139379 140500 . + 0 ID=cds-WP_000048160.1;Parent=gene-C9E93_RS03470;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9E93_RS03470;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 140503 141468 . + . ID=gene-C9E93_RS03475;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=C9E93_RS03475;old_locus_tag=C9E93_03615 NZ_PYJV01000024.1 Protein Homology CDS 140503 141468 . + 0 ID=cds-WP_001041701.1;Parent=gene-C9E93_RS03475;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9E93_RS03475;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 141471 141944 . + . ID=gene-C9E93_RS03480;Name=C9E93_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03480;old_locus_tag=C9E93_03620 NZ_PYJV01000024.1 Protein Homology CDS 141471 141944 . + 0 ID=cds-WP_023245290.1;Parent=gene-C9E93_RS03480;Dbxref=GenBank:WP_023245290.1;Name=WP_023245290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=C9E93_RS03480;product=GDP-mannose mannosyl hydrolase;protein_id=WP_023245290.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 141941 143164 . + . ID=gene-C9E93_RS03485;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=C9E93_RS03485;old_locus_tag=C9E93_03625 NZ_PYJV01000024.1 Protein Homology CDS 141941 143164 . + 0 ID=cds-WP_000699652.1;Parent=gene-C9E93_RS03485;Dbxref=GenBank:WP_000699652.1;Name=WP_000699652.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9E93_RS03485;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699652.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 143161 144603 . + . ID=gene-C9E93_RS03490;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9E93_RS03490;old_locus_tag=C9E93_03630 NZ_PYJV01000024.1 Protein Homology CDS 143161 144603 . + 0 ID=cds-WP_103106940.1;Parent=gene-C9E93_RS03490;Dbxref=GenBank:WP_103106940.1;Name=WP_103106940.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9E93_RS03490;product=mannose-1-phosphate guanyltransferase;protein_id=WP_103106940.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 144714 146084 . + . ID=gene-C9E93_RS03495;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=C9E93_RS03495;old_locus_tag=C9E93_03635 NZ_PYJV01000024.1 Protein Homology CDS 144714 146084 . + 0 ID=cds-WP_135370392.1;Parent=gene-C9E93_RS03495;Dbxref=GenBank:WP_135370392.1;Name=WP_135370392.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9E93_RS03495;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_135370392.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 146138 147532 . + . ID=gene-C9E93_RS03500;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS03500;old_locus_tag=C9E93_03640 NZ_PYJV01000024.1 Protein Homology CDS 146138 147532 . + 0 ID=cds-WP_000183163.1;Parent=gene-C9E93_RS03500;Dbxref=GenBank:WP_000183163.1;Name=WP_000183163.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9E93_RS03500;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183163.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 147634 149112 . + . ID=gene-C9E93_RS03505;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9E93_RS03505;old_locus_tag=C9E93_03645 NZ_PYJV01000024.1 Protein Homology CDS 147634 149112 . + 0 ID=cds-WP_000058681.1;Parent=gene-C9E93_RS03505;Dbxref=GenBank:WP_000058681.1;Name=WP_000058681.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9E93_RS03505;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058681.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 149134 150414 . + . ID=gene-C9E93_RS03510;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9E93_RS03510;old_locus_tag=C9E93_03650 NZ_PYJV01000024.1 Protein Homology CDS 149134 150414 . + 0 ID=cds-WP_000770895.1;Parent=gene-C9E93_RS03510;Dbxref=GenBank:WP_000770895.1;Name=WP_000770895.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9E93_RS03510;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770895.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 150411 151631 . + . ID=gene-C9E93_RS03515;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9E93_RS03515;old_locus_tag=C9E93_03655 NZ_PYJV01000024.1 Protein Homology CDS 150411 151631 . + 0 ID=cds-WP_069722191.1;Parent=gene-C9E93_RS03515;Dbxref=GenBank:WP_069722191.1;Name=WP_069722191.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9E93_RS03515;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_069722191.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 151642 153045 . + . ID=gene-C9E93_RS03520;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9E93_RS03520;old_locus_tag=C9E93_03660 NZ_PYJV01000024.1 Protein Homology CDS 151642 153045 . + 0 ID=cds-WP_023224545.1;Parent=gene-C9E93_RS03520;Dbxref=GenBank:WP_023224545.1;Name=WP_023224545.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9E93_RS03520;product=colanic acid biosynthesis protein WcaM;protein_id=WP_023224545.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 153223 154116 . + . ID=gene-C9E93_RS03525;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9E93_RS03525;old_locus_tag=C9E93_03665 NZ_PYJV01000024.1 Protein Homology CDS 153223 154116 . + 0 ID=cds-WP_109273138.1;Parent=gene-C9E93_RS03525;Dbxref=GenBank:WP_109273138.1;Name=WP_109273138.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9E93_RS03525;product=GalU regulator GalF;protein_id=WP_109273138.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 154492 155577 . + . ID=gene-C9E93_RS03530;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9E93_RS03530;old_locus_tag=C9E93_03670 NZ_PYJV01000024.1 Protein Homology CDS 154492 155577 . + 0 ID=cds-WP_135370391.1;Parent=gene-C9E93_RS03530;Dbxref=GenBank:WP_135370391.1;Name=WP_135370391.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=C9E93_RS03530;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_135370391.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 155577 156476 . + . ID=gene-C9E93_RS03535;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=C9E93_RS03535;old_locus_tag=C9E93_03675 NZ_PYJV01000024.1 Protein Homology CDS 155577 156476 . + 0 ID=cds-WP_001023662.1;Parent=gene-C9E93_RS03535;Dbxref=GenBank:WP_001023662.1;Name=WP_001023662.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=C9E93_RS03535;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023662.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 156524 157402 . + . ID=gene-C9E93_RS03540;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9E93_RS03540;old_locus_tag=C9E93_03680 NZ_PYJV01000024.1 Protein Homology CDS 156524 157402 . + 0 ID=cds-WP_126523980.1;Parent=gene-C9E93_RS03540;Dbxref=GenBank:WP_126523980.1;Name=WP_126523980.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=C9E93_RS03540;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_126523980.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 157403 157954 . + . ID=gene-C9E93_RS03545;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=C9E93_RS03545;old_locus_tag=C9E93_03685 NZ_PYJV01000024.1 Protein Homology CDS 157403 157954 . + 0 ID=cds-WP_077914013.1;Parent=gene-C9E93_RS03545;Dbxref=GenBank:WP_077914013.1;Name=WP_077914013.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=C9E93_RS03545;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_077914013.1;transl_table=11 NZ_PYJV01000024.1 RefSeq pseudogene 157960 158953 . + . ID=gene-C9E93_RS03550;Name=C9E93_RS03550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03550;old_locus_tag=C9E93_03690;pseudo=true NZ_PYJV01000024.1 Protein Homology CDS 157960 158953 . + 0 ID=cds-C9E93_RS03550;Parent=gene-C9E93_RS03550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=C9E93_RS03550;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 158950 159723 . + . ID=gene-C9E93_RS03555;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=C9E93_RS03555;old_locus_tag=C9E93_03695 NZ_PYJV01000024.1 Protein Homology CDS 158950 159723 . + 0 ID=cds-WP_000648783.1;Parent=gene-C9E93_RS03555;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=C9E93_RS03555;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 159728 160807 . + . ID=gene-C9E93_RS03560;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=C9E93_RS03560;old_locus_tag=C9E93_03700 NZ_PYJV01000024.1 Protein Homology CDS 159728 160807 . + 0 ID=cds-WP_135370390.1;Parent=gene-C9E93_RS03560;Dbxref=GenBank:WP_135370390.1;Name=WP_135370390.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9E93_RS03560;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_135370390.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 160834 162147 . + . ID=gene-C9E93_RS03565;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=C9E93_RS03565;old_locus_tag=C9E93_03705 NZ_PYJV01000024.1 Protein Homology CDS 160834 162147 . + 0 ID=cds-WP_000126351.1;Parent=gene-C9E93_RS03565;Dbxref=GenBank:WP_000126351.1;Name=WP_000126351.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=C9E93_RS03565;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126351.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 162182 163021 . + . ID=gene-C9E93_RS03570;Name=rfbS;gbkey=Gene;gene=rfbS;gene_biotype=protein_coding;locus_tag=C9E93_RS03570;old_locus_tag=C9E93_03710 NZ_PYJV01000024.1 Protein Homology CDS 162182 163021 . + 0 ID=cds-WP_109187938.1;Parent=gene-C9E93_RS03570;Dbxref=GenBank:WP_109187938.1;Name=WP_109187938.1;gbkey=CDS;gene=rfbS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=C9E93_RS03570;product=CDP-paratose synthase;protein_id=WP_109187938.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 163018 164034 . + . ID=gene-C9E93_RS03575;Name=rfbE;gbkey=Gene;gene=rfbE;gene_biotype=protein_coding;locus_tag=C9E93_RS03575;old_locus_tag=C9E93_03715 NZ_PYJV01000024.1 Protein Homology CDS 163018 164034 . + 0 ID=cds-WP_000770933.1;Parent=gene-C9E93_RS03575;Dbxref=GenBank:WP_000770933.1;Name=WP_000770933.1;gbkey=CDS;gene=rfbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=C9E93_RS03575;product=CDP-paratose 2-epimerase;protein_id=WP_000770933.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 164105 165403 . + . ID=gene-C9E93_RS03580;Name=C9E93_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03580;old_locus_tag=C9E93_03720 NZ_PYJV01000024.1 Protein Homology CDS 164105 165403 . + 0 ID=cds-WP_001729037.1;Parent=gene-C9E93_RS03580;Dbxref=GenBank:WP_001729037.1;Name=WP_001729037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=C9E93_RS03580;product=MATE family efflux transporter;protein_id=WP_001729037.1;transl_table=11 NZ_PYJV01000024.1 RefSeq gene 165405 166406 . + . ID=gene-C9E93_RS03585;Name=C9E93_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03585;old_locus_tag=C9E93_03725 NZ_PYJV01000024.1 Protein Homology CDS 165405 166406 . + 0 ID=cds-WP_135400585.1;Parent=gene-C9E93_RS03585;Dbxref=GenBank:WP_135400585.1;Name=WP_135400585.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=C9E93_RS03585;product=glycosyltransferase family 2 protein;protein_id=WP_135400585.1;transl_table=11 NZ_PYJV01000024.1 RefSeq pseudogene 167007 168142 . + . ID=gene-C9E93_RS03590;Name=C9E93_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03590;old_locus_tag=C9E93_03730;pseudo=true NZ_PYJV01000024.1 Protein Homology CDS 167007 168142 . + 0 ID=cds-C9E93_RS03590;Parent=gene-C9E93_RS03590;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=C9E93_RS03590;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000055.1 1 68866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000055.1 RefSeq region 1 68866 . + . ID=NZ_PYJV01000055.1:1..68866;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000055.1 RefSeq gene 298 1041 . + . ID=gene-C9E93_RS08260;Name=C9E93_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08260;old_locus_tag=C9E93_08490 NZ_PYJV01000055.1 Protein Homology CDS 298 1041 . + 0 ID=cds-WP_135370084.1;Parent=gene-C9E93_RS08260;Dbxref=GenBank:WP_135370084.1;Name=WP_135370084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=C9E93_RS08260;product=DUF4261 domain-containing protein;protein_id=WP_135370084.1;transl_table=11 NZ_PYJV01000055.1 RefSeq pseudogene 1070 1801 . - . ID=gene-C9E93_RS08265;Name=C9E93_RS08265;end_range=1801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS08265;old_locus_tag=C9E93_08495;partial=true;pseudo=true NZ_PYJV01000055.1 Protein Homology CDS 1070 1801 . - 0 ID=cds-C9E93_RS08265;Parent=gene-C9E93_RS08265;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=1801,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=C9E93_RS08265;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 NZ_PYJV01000055.1 RefSeq pseudogene 1792 1875 . + . ID=gene-C9E93_RS24165;Name=C9E93_RS24165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24165;partial=true;pseudo=true;start_range=.,1792 NZ_PYJV01000055.1 Protein Homology CDS 1792 1875 . + 0 ID=cds-C9E93_RS24165;Parent=gene-C9E93_RS24165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=C9E93_RS24165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1792;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 1997 3262 . - . ID=gene-C9E93_RS08270;Name=C9E93_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08270;old_locus_tag=C9E93_08500 NZ_PYJV01000055.1 Protein Homology CDS 1997 3262 . - 0 ID=cds-WP_017465720.1;Parent=gene-C9E93_RS08270;Dbxref=GenBank:WP_017465720.1;Name=WP_017465720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9E93_RS08270;product=DUF1479 domain-containing protein;protein_id=WP_017465720.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 3524 4333 . + . ID=gene-C9E93_RS08275;Name=C9E93_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08275;old_locus_tag=C9E93_08505 NZ_PYJV01000055.1 Protein Homology CDS 3524 4333 . + 0 ID=cds-WP_000217910.1;Parent=gene-C9E93_RS08275;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9E93_RS08275;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 4411 6843 . - . ID=gene-C9E93_RS08280;Name=C9E93_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08280;old_locus_tag=C9E93_08510 NZ_PYJV01000055.1 Protein Homology CDS 4411 6843 . - 0 ID=cds-WP_135370079.1;Parent=gene-C9E93_RS08280;Dbxref=GenBank:WP_135370079.1;Name=WP_135370079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9E93_RS08280;product=glycyl radical protein;protein_id=WP_135370079.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 6849 7748 . - . ID=gene-C9E93_RS08285;Name=C9E93_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08285;old_locus_tag=C9E93_08515 NZ_PYJV01000055.1 Protein Homology CDS 6849 7748 . - 0 ID=cds-WP_000576947.1;Parent=gene-C9E93_RS08285;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9E93_RS08285;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 8026 8775 . - . ID=gene-C9E93_RS08290;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9E93_RS08290;old_locus_tag=C9E93_08520 NZ_PYJV01000055.1 Protein Homology CDS 8026 8775 . - 0 ID=cds-WP_000829280.1;Parent=gene-C9E93_RS08290;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9E93_RS08290;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 8775 10010 . - . ID=gene-C9E93_RS08295;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9E93_RS08295;old_locus_tag=C9E93_08525 NZ_PYJV01000055.1 Protein Homology CDS 8775 10010 . - 0 ID=cds-WP_000395790.1;Parent=gene-C9E93_RS08295;Dbxref=GenBank:WP_000395790.1;Name=WP_000395790.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9E93_RS08295;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395790.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 10213 11154 . + . ID=gene-C9E93_RS08300;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9E93_RS08300;old_locus_tag=C9E93_08530 NZ_PYJV01000055.1 Protein Homology CDS 10213 11154 . + 0 ID=cds-WP_001030503.1;Parent=gene-C9E93_RS08300;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9E93_RS08300;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 11165 13036 . + . ID=gene-C9E93_RS08305;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9E93_RS08305;old_locus_tag=C9E93_08535 NZ_PYJV01000055.1 Protein Homology CDS 11165 13036 . + 0 ID=cds-WP_135370080.1;Parent=gene-C9E93_RS08305;Dbxref=GenBank:WP_135370080.1;Name=WP_135370080.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9E93_RS08305;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_135370080.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 13069 14607 . + . ID=gene-C9E93_RS08310;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9E93_RS08310;old_locus_tag=C9E93_08540 NZ_PYJV01000055.1 Protein Homology CDS 13069 14607 . + 0 ID=cds-WP_000191440.1;Parent=gene-C9E93_RS08310;Dbxref=GenBank:WP_000191440.1;Name=WP_000191440.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9E93_RS08310;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191440.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 14668 15588 . + . ID=gene-C9E93_RS08315;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9E93_RS08315;old_locus_tag=C9E93_08545 NZ_PYJV01000055.1 Protein Homology CDS 14668 15588 . + 0 ID=cds-WP_000936066.1;Parent=gene-C9E93_RS08315;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9E93_RS08315;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 15591 16502 . + . ID=gene-C9E93_RS08320;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9E93_RS08320;old_locus_tag=C9E93_08550 NZ_PYJV01000055.1 Protein Homology CDS 15591 16502 . + 0 ID=cds-WP_001236024.1;Parent=gene-C9E93_RS08320;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9E93_RS08320;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 16593 17918 . - . ID=gene-C9E93_RS08325;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9E93_RS08325;old_locus_tag=C9E93_08555 NZ_PYJV01000055.1 Protein Homology CDS 16593 17918 . - 0 ID=cds-WP_000073313.1;Parent=gene-C9E93_RS08325;Dbxref=GenBank:WP_000073313.1;Name=WP_000073313.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9E93_RS08325;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073313.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 18149 18532 . + . ID=gene-C9E93_RS08330;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9E93_RS08330;old_locus_tag=C9E93_08560 NZ_PYJV01000055.1 Protein Homology CDS 18149 18532 . + 0 ID=cds-WP_071055290.1;Parent=gene-C9E93_RS08330;Dbxref=GenBank:WP_071055290.1;Name=WP_071055290.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9E93_RS08330;product=biofilm formation regulator BssR;protein_id=WP_071055290.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 18650 19771 . + . ID=gene-C9E93_RS08335;Name=C9E93_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08335;old_locus_tag=C9E93_08565 NZ_PYJV01000055.1 Protein Homology CDS 18650 19771 . + 0 ID=cds-WP_017441945.1;Parent=gene-C9E93_RS08335;Dbxref=GenBank:WP_017441945.1;Name=WP_017441945.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=C9E93_RS08335;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_017441945.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 19768 20394 . - . ID=gene-C9E93_RS08340;Name=C9E93_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08340;old_locus_tag=C9E93_08570 NZ_PYJV01000055.1 Protein Homology CDS 19768 20394 . - 0 ID=cds-WP_135370081.1;Parent=gene-C9E93_RS08340;Dbxref=GenBank:WP_135370081.1;Name=WP_135370081.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9E93_RS08340;product=glutathione S-transferase family protein;protein_id=WP_135370081.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 20638 21840 . + . ID=gene-C9E93_RS08345;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9E93_RS08345;old_locus_tag=C9E93_08575 NZ_PYJV01000055.1 Protein Homology CDS 20638 21840 . + 0 ID=cds-WP_135370082.1;Parent=gene-C9E93_RS08345;Dbxref=GenBank:WP_135370082.1;Name=WP_135370082.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9E93_RS08345;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_135370082.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 21885 22643 . - . ID=gene-C9E93_RS08350;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9E93_RS08350;old_locus_tag=C9E93_08580 NZ_PYJV01000055.1 Protein Homology CDS 21885 22643 . - 0 ID=cds-WP_000450101.1;Parent=gene-C9E93_RS08350;Dbxref=GenBank:WP_000450101.1;Name=WP_000450101.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9E93_RS08350;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450101.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 22715 23323 . - . ID=gene-C9E93_RS08355;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9E93_RS08355;old_locus_tag=C9E93_08585 NZ_PYJV01000055.1 Protein Homology CDS 22715 23323 . - 0 ID=cds-WP_001531378.1;Parent=gene-C9E93_RS08355;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9E93_RS08355;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 23636 24868 . + . ID=gene-C9E93_RS08360;Name=C9E93_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08360;old_locus_tag=C9E93_08590 NZ_PYJV01000055.1 Protein Homology CDS 23636 24868 . + 0 ID=cds-WP_001181284.1;Parent=gene-C9E93_RS08360;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9E93_RS08360;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 24922 25737 . - . ID=gene-C9E93_RS08365;Name=C9E93_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08365;old_locus_tag=C9E93_08595 NZ_PYJV01000055.1 Protein Homology CDS 24922 25737 . - 0 ID=cds-WP_001617070.1;Parent=gene-C9E93_RS08365;Dbxref=GenBank:WP_001617070.1;Name=WP_001617070.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9E93_RS08365;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001617070.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 25734 26945 . - . ID=gene-C9E93_RS08370;Name=C9E93_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08370;old_locus_tag=C9E93_08600 NZ_PYJV01000055.1 Protein Homology CDS 25734 26945 . - 0 ID=cds-WP_000217430.1;Parent=gene-C9E93_RS08370;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9E93_RS08370;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 27113 27673 . + . ID=gene-C9E93_RS08375;Name=C9E93_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08375;old_locus_tag=C9E93_08605 NZ_PYJV01000055.1 Protein Homology CDS 27113 27673 . + 0 ID=cds-WP_000661880.1;Parent=gene-C9E93_RS08375;Dbxref=GenBank:WP_000661880.1;Name=WP_000661880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661880.1;locus_tag=C9E93_RS08375;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661880.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 27850 29535 . - . ID=gene-C9E93_RS08385;Name=C9E93_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08385;old_locus_tag=C9E93_08615 NZ_PYJV01000055.1 Protein Homology CDS 27850 29535 . - 0 ID=cds-WP_001024853.1;Parent=gene-C9E93_RS08385;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9E93_RS08385;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 29806 30183 . + . ID=gene-C9E93_RS08390;Name=C9E93_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08390;old_locus_tag=C9E93_08625 NZ_PYJV01000055.1 Protein Homology CDS 29806 30183 . + 0 ID=cds-WP_000680850.1;Parent=gene-C9E93_RS08390;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9E93_RS08390;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 30215 30478 . - . ID=gene-C9E93_RS08395;Name=C9E93_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08395;old_locus_tag=C9E93_08630 NZ_PYJV01000055.1 Protein Homology CDS 30215 30478 . - 0 ID=cds-WP_000495513.1;Parent=gene-C9E93_RS08395;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9E93_RS08395;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 30648 30938 . + . ID=gene-C9E93_RS08400;Name=C9E93_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08400;old_locus_tag=C9E93_08635 NZ_PYJV01000055.1 Protein Homology CDS 30648 30938 . + 0 ID=cds-WP_001259131.1;Parent=gene-C9E93_RS08400;Dbxref=GenBank:WP_001259131.1;Name=WP_001259131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9E93_RS08400;product=YbjC family protein;protein_id=WP_001259131.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 30922 31644 . + . ID=gene-C9E93_RS08405;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9E93_RS08405;old_locus_tag=C9E93_08640 NZ_PYJV01000055.1 Protein Homology CDS 30922 31644 . + 0 ID=cds-WP_000075300.1;Parent=gene-C9E93_RS08405;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9E93_RS08405;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 31702 32604 . + . ID=gene-C9E93_RS08410;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9E93_RS08410;old_locus_tag=C9E93_08645 NZ_PYJV01000055.1 Protein Homology CDS 31702 32604 . + 0 ID=cds-WP_000684361.1;Parent=gene-C9E93_RS08410;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9E93_RS08410;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 32701 33177 . + . ID=gene-C9E93_RS08415;Name=C9E93_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08415;old_locus_tag=C9E93_08650 NZ_PYJV01000055.1 Protein Homology CDS 32701 33177 . + 0 ID=cds-WP_000624813.1;Parent=gene-C9E93_RS08415;Dbxref=GenBank:WP_000624813.1;Name=WP_000624813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9E93_RS08415;product=YbjN domain-containing protein;protein_id=WP_000624813.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 33526 34638 . + . ID=gene-C9E93_RS08420;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9E93_RS08420;old_locus_tag=C9E93_08655 NZ_PYJV01000055.1 Protein Homology CDS 33526 34638 . + 0 ID=cds-WP_000125769.1;Parent=gene-C9E93_RS08420;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9E93_RS08420;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 34726 35859 . + . ID=gene-C9E93_RS08425;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9E93_RS08425;old_locus_tag=C9E93_08660 NZ_PYJV01000055.1 Protein Homology CDS 34726 35859 . + 0 ID=cds-WP_135370083.1;Parent=gene-C9E93_RS08425;Dbxref=GenBank:WP_135370083.1;Name=WP_135370083.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9E93_RS08425;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_135370083.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 35869 36822 . + . ID=gene-C9E93_RS08430;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9E93_RS08430;old_locus_tag=C9E93_08665 NZ_PYJV01000055.1 Protein Homology CDS 35869 36822 . + 0 ID=cds-WP_000105453.1;Parent=gene-C9E93_RS08430;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9E93_RS08430;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 36819 37664 . + . ID=gene-C9E93_RS08435;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9E93_RS08435;old_locus_tag=C9E93_08670 NZ_PYJV01000055.1 Protein Homology CDS 36819 37664 . + 0 ID=cds-WP_001061629.1;Parent=gene-C9E93_RS08435;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9E93_RS08435;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 37738 38211 . + . ID=gene-C9E93_RS08440;Name=C9E93_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08440;old_locus_tag=C9E93_08675 NZ_PYJV01000055.1 Protein Homology CDS 37738 38211 . + 0 ID=cds-WP_000505788.1;Parent=gene-C9E93_RS08440;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9E93_RS08440;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 38254 39381 . + . ID=gene-C9E93_RS08445;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9E93_RS08445;old_locus_tag=C9E93_08680 NZ_PYJV01000055.1 Protein Homology CDS 38254 39381 . + 0 ID=cds-WP_001149792.1;Parent=gene-C9E93_RS08445;Dbxref=GenBank:WP_001149792.1;Name=WP_001149792.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9E93_RS08445;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149792.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 39676 41019 . + . ID=gene-C9E93_RS08450;Name=C9E93_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08450;old_locus_tag=C9E93_08685 NZ_PYJV01000055.1 Protein Homology CDS 39676 41019 . + 0 ID=cds-WP_000399323.1;Parent=gene-C9E93_RS08450;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9E93_RS08450;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 41049 41369 . + . ID=gene-C9E93_RS08455;Name=C9E93_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08455;old_locus_tag=C9E93_08690 NZ_PYJV01000055.1 Protein Homology CDS 41049 41369 . + 0 ID=cds-WP_000655399.1;Parent=gene-C9E93_RS08455;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9E93_RS08455;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 41379 42866 . + . ID=gene-C9E93_RS08460;Name=C9E93_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08460;old_locus_tag=C9E93_08695 NZ_PYJV01000055.1 Protein Homology CDS 41379 42866 . + 0 ID=cds-WP_000644020.1;Parent=gene-C9E93_RS08460;Dbxref=GenBank:WP_000644020.1;Name=WP_000644020.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9E93_RS08460;product=sulfatase;protein_id=WP_000644020.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 43085 43816 . - . ID=gene-C9E93_RS08465;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9E93_RS08465;old_locus_tag=C9E93_08705 NZ_PYJV01000055.1 Protein Homology CDS 43085 43816 . - 0 ID=cds-WP_000737538.1;Parent=gene-C9E93_RS08465;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9E93_RS08465;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 44053 44721 . - . ID=gene-C9E93_RS08470;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9E93_RS08470;old_locus_tag=C9E93_08710 NZ_PYJV01000055.1 Protein Homology CDS 44053 44721 . - 0 ID=cds-WP_000895396.1;Parent=gene-C9E93_RS08470;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9E93_RS08470;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 44721 45437 . - . ID=gene-C9E93_RS08475;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9E93_RS08475;old_locus_tag=C9E93_08715 NZ_PYJV01000055.1 Protein Homology CDS 44721 45437 . - 0 ID=cds-WP_001001677.1;Parent=gene-C9E93_RS08475;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9E93_RS08475;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 45444 46175 . - . ID=gene-C9E93_RS08480;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=C9E93_RS08480;old_locus_tag=C9E93_08720 NZ_PYJV01000055.1 Protein Homology CDS 45444 46175 . - 0 ID=cds-WP_000756586.1;Parent=gene-C9E93_RS08480;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9E93_RS08480;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 46193 46921 . - . ID=gene-C9E93_RS08485;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9E93_RS08485;old_locus_tag=C9E93_08725 NZ_PYJV01000055.1 Protein Homology CDS 46193 46921 . - 0 ID=cds-WP_000027186.1;Parent=gene-C9E93_RS08485;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9E93_RS08485;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 47151 47666 . - . ID=gene-C9E93_RS08490;Name=C9E93_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08490;old_locus_tag=C9E93_08730 NZ_PYJV01000055.1 Protein Homology CDS 47151 47666 . - 0 ID=cds-WP_001270724.1;Parent=gene-C9E93_RS08490;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9E93_RS08490;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 47794 48117 . + . ID=gene-C9E93_RS08495;Name=C9E93_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08495;old_locus_tag=C9E93_08735 NZ_PYJV01000055.1 Protein Homology CDS 47794 48117 . + 0 ID=cds-WP_001160725.1;Parent=gene-C9E93_RS08495;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E93_RS08495;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 48114 48944 . + . ID=gene-C9E93_RS08500;Name=C9E93_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08500;old_locus_tag=C9E93_08740 NZ_PYJV01000055.1 Protein Homology CDS 48114 48944 . + 0 ID=cds-WP_000645850.1;Parent=gene-C9E93_RS08500;Dbxref=GenBank:WP_000645850.1;Name=WP_000645850.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9E93_RS08500;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 48941 49954 . - . ID=gene-C9E93_RS08505;Name=C9E93_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08505;old_locus_tag=C9E93_08745 NZ_PYJV01000055.1 Protein Homology CDS 48941 49954 . - 0 ID=cds-WP_000866903.1;Parent=gene-C9E93_RS08505;Dbxref=GenBank:WP_000866903.1;Name=WP_000866903.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9E93_RS08505;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866903.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 50050 51483 . - . ID=gene-C9E93_RS08510;Name=C9E93_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08510;old_locus_tag=C9E93_08750 NZ_PYJV01000055.1 Protein Homology CDS 50050 51483 . - 0 ID=cds-WP_135370308.1;Parent=gene-C9E93_RS08510;Dbxref=GenBank:WP_135370308.1;Name=WP_135370308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9E93_RS08510;product=SDR family oxidoreductase;protein_id=WP_135370308.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 51494 52495 . - . ID=gene-C9E93_RS08515;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=C9E93_RS08515;old_locus_tag=C9E93_08755 NZ_PYJV01000055.1 Protein Homology CDS 51494 52495 . - 0 ID=cds-WP_000566346.1;Parent=gene-C9E93_RS08515;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9E93_RS08515;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 52534 54252 . - . ID=gene-C9E93_RS08520;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=C9E93_RS08520;old_locus_tag=C9E93_08760 NZ_PYJV01000055.1 Protein Homology CDS 52534 54252 . - 0 ID=cds-WP_000815324.1;Parent=gene-C9E93_RS08520;Dbxref=GenBank:WP_000815324.1;Name=WP_000815324.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9E93_RS08520;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815324.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 54410 55378 . - . ID=gene-C9E93_RS08525;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9E93_RS08525;old_locus_tag=C9E93_08765 NZ_PYJV01000055.1 Protein Homology CDS 54410 55378 . - 0 ID=cds-WP_023216393.1;Parent=gene-C9E93_RS08525;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9E93_RS08525;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 55390 57042 . - . ID=gene-C9E93_RS08530;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9E93_RS08530;old_locus_tag=C9E93_08770 NZ_PYJV01000055.1 Protein Homology CDS 55390 57042 . - 0 ID=cds-WP_135370307.1;Parent=gene-C9E93_RS08530;Dbxref=GenBank:WP_135370307.1;Name=WP_135370307.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9E93_RS08530;product=hydroxylamine reductase;protein_id=WP_135370307.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 57186 58085 . - . ID=gene-C9E93_RS08535;Name=C9E93_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08535;old_locus_tag=C9E93_08775 NZ_PYJV01000055.1 Protein Homology CDS 57186 58085 . - 0 ID=cds-WP_000491118.1;Parent=gene-C9E93_RS08535;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9E93_RS08535;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 58287 59945 . + . ID=gene-C9E93_RS08540;Name=C9E93_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08540;old_locus_tag=C9E93_08785 NZ_PYJV01000055.1 Protein Homology CDS 58287 59945 . + 0 ID=cds-WP_000599763.1;Parent=gene-C9E93_RS08540;Dbxref=GenBank:WP_000599763.1;Name=WP_000599763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9E93_RS08540;product=ATP-dependent endonuclease;protein_id=WP_000599763.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 59942 60892 . - . ID=gene-C9E93_RS08545;Name=C9E93_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08545;old_locus_tag=C9E93_08790 NZ_PYJV01000055.1 Protein Homology CDS 59942 60892 . - 0 ID=cds-WP_135370267.1;Parent=gene-C9E93_RS08545;Dbxref=GenBank:WP_135370267.1;Name=WP_135370267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9E93_RS08545;product=VirK/YbjX family protein;protein_id=WP_135370267.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 61038 62156 . + . ID=gene-C9E93_RS08550;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=C9E93_RS08550;old_locus_tag=C9E93_08795 NZ_PYJV01000055.1 Protein Homology CDS 61038 62156 . + 0 ID=cds-WP_001523024.1;Parent=gene-C9E93_RS08550;Dbxref=GenBank:WP_001523024.1;Name=WP_001523024.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9E93_RS08550;product=macrolide transporter subunit MacA;protein_id=WP_001523024.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 62153 64099 . + . ID=gene-C9E93_RS08555;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9E93_RS08555;old_locus_tag=C9E93_08800 NZ_PYJV01000055.1 Protein Homology CDS 62153 64099 . + 0 ID=cds-WP_135400605.1;Parent=gene-C9E93_RS08555;Dbxref=GenBank:WP_135400605.1;Name=WP_135400605.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9E93_RS08555;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_135400605.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 64229 64450 . - . ID=gene-C9E93_RS08560;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9E93_RS08560;old_locus_tag=C9E93_08810 NZ_PYJV01000055.1 Protein Homology CDS 64229 64450 . - 0 ID=cds-WP_000447499.1;Parent=gene-C9E93_RS08560;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9E93_RS08560;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 64601 64678 . + . ID=gene-C9E93_RS23695;Name=C9E93_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23695 NZ_PYJV01000055.1 Protein Homology CDS 64601 64678 . + 0 ID=cds-WP_212742690.1;Parent=gene-C9E93_RS23695;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9E93_RS23695;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 64774 65094 . + . ID=gene-C9E93_RS08565;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9E93_RS08565;old_locus_tag=C9E93_08815 NZ_PYJV01000055.1 Protein Homology CDS 64774 65094 . + 0 ID=cds-WP_000520789.1;Parent=gene-C9E93_RS08565;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9E93_RS08565;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 65125 67401 . + . ID=gene-C9E93_RS08570;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9E93_RS08570;old_locus_tag=C9E93_08820 NZ_PYJV01000055.1 Protein Homology CDS 65125 67401 . + 0 ID=cds-WP_000934064.1;Parent=gene-C9E93_RS08570;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9E93_RS08570;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_PYJV01000055.1 RefSeq gene 67614 67811 . - . ID=gene-C9E93_RS08575;Name=C9E93_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08575;old_locus_tag=C9E93_08825 NZ_PYJV01000055.1 Protein Homology CDS 67614 67811 . - 0 ID=cds-WP_001117984.1;Parent=gene-C9E93_RS08575;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=C9E93_RS08575;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_PYJV01000055.1 RefSeq pseudogene 67973 68326 . - . ID=gene-C9E93_RS08580;Name=C9E93_RS08580;end_range=68326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS08580;old_locus_tag=C9E93_08830;partial=true;pseudo=true NZ_PYJV01000055.1 Protein Homology CDS 67973 68326 . - 0 ID=cds-C9E93_RS08580;Parent=gene-C9E93_RS08580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=68326,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=C9E93_RS08580;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000047.1 1 65428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000047.1 RefSeq region 1 65428 . + . ID=NZ_PYJV01000047.1:1..65428;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000047.1 RefSeq gene 246 1847 . + . ID=gene-C9E93_RS07100;Name=C9E93_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07100;old_locus_tag=C9E93_07320 NZ_PYJV01000047.1 Protein Homology CDS 246 1847 . + 0 ID=cds-WP_135370078.1;Parent=gene-C9E93_RS07100;Dbxref=GenBank:WP_135370078.1;Name=WP_135370078.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9E93_RS07100;product=EAL domain-containing protein;protein_id=WP_135370078.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 1835 2158 . - . ID=gene-C9E93_RS07105;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9E93_RS07105;old_locus_tag=C9E93_07325 NZ_PYJV01000047.1 Protein Homology CDS 1835 2158 . - 0 ID=cds-WP_000019483.1;Parent=gene-C9E93_RS07105;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9E93_RS07105;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 2245 2703 . + . ID=gene-C9E93_RS07110;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9E93_RS07110;old_locus_tag=C9E93_07330 NZ_PYJV01000047.1 Protein Homology CDS 2245 2703 . + 0 ID=cds-WP_000412686.1;Parent=gene-C9E93_RS07110;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9E93_RS07110;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 2996 3664 . + . ID=gene-C9E93_RS07115;Name=C9E93_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07115;old_locus_tag=C9E93_07335 NZ_PYJV01000047.1 Protein Homology CDS 2996 3664 . + 0 ID=cds-WP_000958575.1;Parent=gene-C9E93_RS07115;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9E93_RS07115;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 4011 5360 . + . ID=gene-C9E93_RS07120;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=C9E93_RS07120;old_locus_tag=C9E93_07345 NZ_PYJV01000047.1 Protein Homology CDS 4011 5360 . + 0 ID=cds-WP_135370077.1;Parent=gene-C9E93_RS07120;Dbxref=GenBank:WP_135370077.1;Name=WP_135370077.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9E93_RS07120;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_135370077.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 5510 7156 . + . ID=gene-C9E93_RS07130;Name=C9E93_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07130;old_locus_tag=C9E93_07355 NZ_PYJV01000047.1 Protein Homology CDS 5510 7156 . + 0 ID=cds-WP_000402189.1;Parent=gene-C9E93_RS07130;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9E93_RS07130;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 7251 8138 . - . ID=gene-C9E93_RS07135;Name=C9E93_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07135;old_locus_tag=C9E93_07360 NZ_PYJV01000047.1 Protein Homology CDS 7251 8138 . - 0 ID=cds-WP_000354962.1;Parent=gene-C9E93_RS07135;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9E93_RS07135;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 8242 8652 . + . ID=gene-C9E93_RS07140;Name=C9E93_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07140;old_locus_tag=C9E93_07365 NZ_PYJV01000047.1 Protein Homology CDS 8242 8652 . + 0 ID=cds-WP_000257347.1;Parent=gene-C9E93_RS07140;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9E93_RS07140;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 8645 9334 . + . ID=gene-C9E93_RS07145;Name=C9E93_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07145;old_locus_tag=C9E93_07370 NZ_PYJV01000047.1 Protein Homology CDS 8645 9334 . + 0 ID=cds-WP_001067096.1;Parent=gene-C9E93_RS07145;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9E93_RS07145;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 9373 11022 . - . ID=gene-C9E93_RS07150;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9E93_RS07150;old_locus_tag=C9E93_07375 NZ_PYJV01000047.1 Protein Homology CDS 9373 11022 . - 0 ID=cds-WP_000832536.1;Parent=gene-C9E93_RS07150;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9E93_RS07150;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 11019 11333 . - . ID=gene-C9E93_RS07155;Name=C9E93_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07155;old_locus_tag=C9E93_07380 NZ_PYJV01000047.1 Protein Homology CDS 11019 11333 . - 0 ID=cds-WP_000999620.1;Parent=gene-C9E93_RS07155;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9E93_RS07155;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 11573 13531 . - . ID=gene-C9E93_RS07160;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9E93_RS07160;old_locus_tag=C9E93_07390 NZ_PYJV01000047.1 Protein Homology CDS 11573 13531 . - 0 ID=cds-WP_000083871.1;Parent=gene-C9E93_RS07160;Dbxref=GenBank:WP_000083871.1;Name=WP_000083871.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9E93_RS07160;product=acetate--CoA ligase;protein_id=WP_000083871.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 13963 15399 . + . ID=gene-C9E93_RS07165;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9E93_RS07165;old_locus_tag=C9E93_07400 NZ_PYJV01000047.1 Protein Homology CDS 13963 15399 . + 0 ID=cds-WP_000101776.1;Parent=gene-C9E93_RS07165;Dbxref=GenBank:WP_000101776.1;Name=WP_000101776.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9E93_RS07165;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101776.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 15444 16010 . + . ID=gene-C9E93_RS07170;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9E93_RS07170;old_locus_tag=C9E93_07405 NZ_PYJV01000047.1 Protein Homology CDS 15444 16010 . + 0 ID=cds-WP_000115065.1;Parent=gene-C9E93_RS07170;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9E93_RS07170;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 16007 16678 . + . ID=gene-C9E93_RS07175;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9E93_RS07175;old_locus_tag=C9E93_07410 NZ_PYJV01000047.1 Protein Homology CDS 16007 16678 . + 0 ID=cds-WP_058111201.1;Parent=gene-C9E93_RS07175;Dbxref=GenBank:WP_058111201.1;Name=WP_058111201.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9E93_RS07175;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_058111201.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 16675 17631 . + . ID=gene-C9E93_RS07180;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9E93_RS07180;old_locus_tag=C9E93_07415 NZ_PYJV01000047.1 Protein Homology CDS 16675 17631 . + 0 ID=cds-WP_135370076.1;Parent=gene-C9E93_RS07180;Dbxref=GenBank:WP_135370076.1;Name=WP_135370076.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9E93_RS07180;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_135370076.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 17624 19846 . + . ID=gene-C9E93_RS07185;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=C9E93_RS07185;old_locus_tag=C9E93_07420 NZ_PYJV01000047.1 Protein Homology CDS 17624 19846 . + 0 ID=cds-WP_135370075.1;Parent=gene-C9E93_RS07185;Dbxref=GenBank:WP_135370075.1;Name=WP_135370075.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E93_RS07185;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_135370075.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 19843 20463 . + . ID=gene-C9E93_RS07190;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9E93_RS07190;old_locus_tag=C9E93_07425 NZ_PYJV01000047.1 Protein Homology CDS 19843 20463 . + 0 ID=cds-WP_000083223.1;Parent=gene-C9E93_RS07190;Dbxref=GenBank:WP_000083223.1;Name=WP_000083223.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9E93_RS07190;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083223.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 20808 22118 . + . ID=gene-C9E93_RS07195;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9E93_RS07195;old_locus_tag=C9E93_07430 NZ_PYJV01000047.1 Protein Homology CDS 20808 22118 . + 0 ID=cds-WP_000793278.1;Parent=gene-C9E93_RS07195;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9E93_RS07195;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 22276 22965 . - . ID=gene-C9E93_RS07200;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=C9E93_RS07200;old_locus_tag=C9E93_07435 NZ_PYJV01000047.1 Protein Homology CDS 22276 22965 . - 0 ID=cds-WP_106805890.1;Parent=gene-C9E93_RS07200;Dbxref=GenBank:WP_106805890.1;Name=WP_106805890.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9E93_RS07200;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_106805890.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 23142 25289 . - . ID=gene-C9E93_RS07205;Name=C9E93_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07205;old_locus_tag=C9E93_07440 NZ_PYJV01000047.1 Protein Homology CDS 23142 25289 . - 0 ID=cds-WP_011233236.1;Parent=gene-C9E93_RS07205;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9E93_RS07205;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:complement(24870..24872)%2Caa:Sec);transl_table=11 NZ_PYJV01000047.1 RefSeq gene 25644 26552 . - . ID=gene-C9E93_RS07210;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9E93_RS07210;old_locus_tag=C9E93_07445 NZ_PYJV01000047.1 Protein Homology CDS 25644 26552 . - 0 ID=cds-WP_106805891.1;Parent=gene-C9E93_RS07210;Dbxref=GenBank:WP_106805891.1;Name=WP_106805891.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9E93_RS07210;product=lipid A hydroxylase LpxO;protein_id=WP_106805891.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 26730 27635 . - . ID=gene-C9E93_RS07215;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=C9E93_RS07215;old_locus_tag=C9E93_07450 NZ_PYJV01000047.1 Protein Homology CDS 26730 27635 . - 0 ID=cds-WP_031605711.1;Parent=gene-C9E93_RS07215;Dbxref=GenBank:WP_031605711.1;Name=WP_031605711.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907525.1;locus_tag=C9E93_RS07215;product=allose kinase;protein_id=WP_031605711.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 27619 28314 . - . ID=gene-C9E93_RS07220;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=C9E93_RS07220;old_locus_tag=C9E93_07455 NZ_PYJV01000047.1 Protein Homology CDS 27619 28314 . - 0 ID=cds-WP_031605712.1;Parent=gene-C9E93_RS07220;Dbxref=GenBank:WP_031605712.1;Name=WP_031605712.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=C9E93_RS07220;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_031605712.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 28325 29305 . - . ID=gene-C9E93_RS07225;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=C9E93_RS07225;old_locus_tag=C9E93_07460 NZ_PYJV01000047.1 Protein Homology CDS 28325 29305 . - 0 ID=cds-WP_031605713.1;Parent=gene-C9E93_RS07225;Dbxref=GenBank:WP_031605713.1;Name=WP_031605713.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9E93_RS07225;product=D-allose ABC transporter permease;protein_id=WP_031605713.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 29284 30816 . - . ID=gene-C9E93_RS07230;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=C9E93_RS07230;old_locus_tag=C9E93_07465 NZ_PYJV01000047.1 Protein Homology CDS 29284 30816 . - 0 ID=cds-WP_031605714.1;Parent=gene-C9E93_RS07230;Dbxref=GenBank:WP_031605714.1;Name=WP_031605714.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=C9E93_RS07230;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_031605714.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 30936 31877 . - . ID=gene-C9E93_RS07235;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=C9E93_RS07235;old_locus_tag=C9E93_07470 NZ_PYJV01000047.1 Protein Homology CDS 30936 31877 . - 0 ID=cds-WP_031605715.1;Parent=gene-C9E93_RS07235;Dbxref=GenBank:WP_031605715.1;Name=WP_031605715.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9E93_RS07235;product=D-allose transporter substrate-binding protein;protein_id=WP_031605715.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 31940 32830 . - . ID=gene-C9E93_RS07240;Name=C9E93_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07240;old_locus_tag=C9E93_07475 NZ_PYJV01000047.1 Protein Homology CDS 31940 32830 . - 0 ID=cds-WP_031605717.1;Parent=gene-C9E93_RS07240;Dbxref=GenBank:WP_031605717.1;Name=WP_031605717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=C9E93_RS07240;product=MurR/RpiR family transcriptional regulator;protein_id=WP_031605717.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 33190 33639 . + . ID=gene-C9E93_RS07245;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=C9E93_RS07245;old_locus_tag=C9E93_07480 NZ_PYJV01000047.1 Protein Homology CDS 33190 33639 . + 0 ID=cds-WP_031605719.1;Parent=gene-C9E93_RS07245;Dbxref=GenBank:WP_031605719.1;Name=WP_031605719.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=C9E93_RS07245;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_031605719.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 33769 34212 . - . ID=gene-C9E93_RS07250;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9E93_RS07250;old_locus_tag=C9E93_07485 NZ_PYJV01000047.1 Protein Homology CDS 33769 34212 . - 0 ID=cds-WP_001131303.1;Parent=gene-C9E93_RS07250;Dbxref=GenBank:WP_001131303.1;Name=WP_001131303.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9E93_RS07250;product=VOC family metalloprotein YjdN;protein_id=WP_001131303.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 34332 34667 . - . ID=gene-C9E93_RS07255;Name=C9E93_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07255;old_locus_tag=C9E93_07490 NZ_PYJV01000047.1 Protein Homology CDS 34332 34667 . - 0 ID=cds-WP_000056482.1;Parent=gene-C9E93_RS07255;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=C9E93_RS07255;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 35135 36637 . + . ID=gene-C9E93_RS07260;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9E93_RS07260;old_locus_tag=C9E93_07495 NZ_PYJV01000047.1 Protein Homology CDS 35135 36637 . + 0 ID=cds-WP_000919710.1;Parent=gene-C9E93_RS07260;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9E93_RS07260;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 36707 36796 . + . ID=gene-C9E93_RS07265;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9E93_RS07265;old_locus_tag=C9E93_07500 NZ_PYJV01000047.1 Protein Homology CDS 36707 36796 . + 0 ID=cds-WP_000844399.1;Parent=gene-C9E93_RS07265;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9E93_RS07265;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 36804 37874 . - . ID=gene-C9E93_RS07270;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9E93_RS07270;old_locus_tag=C9E93_07505 NZ_PYJV01000047.1 Protein Homology CDS 36804 37874 . - 0 ID=cds-WP_001212189.1;Parent=gene-C9E93_RS07270;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9E93_RS07270;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 37884 38552 . - . ID=gene-C9E93_RS07275;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9E93_RS07275;old_locus_tag=C9E93_07510 NZ_PYJV01000047.1 Protein Homology CDS 37884 38552 . - 0 ID=cds-WP_000697899.1;Parent=gene-C9E93_RS07275;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9E93_RS07275;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 38549 40192 . - . ID=gene-C9E93_RS07280;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9E93_RS07280;old_locus_tag=C9E93_07515 NZ_PYJV01000047.1 Protein Homology CDS 38549 40192 . - 0 ID=cds-WP_050068061.1;Parent=gene-C9E93_RS07280;Dbxref=GenBank:WP_050068061.1;Name=WP_050068061.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9E93_RS07280;product=phosphoethanolamine transferase EptA;protein_id=WP_050068061.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 40326 41663 . - . ID=gene-C9E93_RS07285;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9E93_RS07285;old_locus_tag=C9E93_07520 NZ_PYJV01000047.1 Protein Homology CDS 40326 41663 . - 0 ID=cds-WP_000093130.1;Parent=gene-C9E93_RS07285;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9E93_RS07285;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 41803 42564 . - . ID=gene-C9E93_RS07290;Name=C9E93_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07290;old_locus_tag=C9E93_07525 NZ_PYJV01000047.1 Protein Homology CDS 41803 42564 . - 0 ID=cds-WP_001217083.1;Parent=gene-C9E93_RS07290;Dbxref=GenBank:WP_001217083.1;Name=WP_001217083.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9E93_RS07290;product=AraC family transcriptional regulator;protein_id=WP_001217083.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 42862 45129 . - . ID=gene-C9E93_RS07295;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9E93_RS07295;old_locus_tag=C9E93_07530 NZ_PYJV01000047.1 Protein Homology CDS 42862 45129 . - 0 ID=cds-WP_001542850.1;Parent=gene-C9E93_RS07295;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9E93_RS07295;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 45362 46294 . - . ID=gene-C9E93_RS07300;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9E93_RS07300;old_locus_tag=C9E93_07535 NZ_PYJV01000047.1 Protein Homology CDS 45362 46294 . - 0 ID=cds-WP_071692107.1;Parent=gene-C9E93_RS07300;Dbxref=GenBank:WP_071692107.1;Name=WP_071692107.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9E93_RS07300;product=transcriptional regulator MelR;protein_id=WP_071692107.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 46563 47918 . + . ID=gene-C9E93_RS07305;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9E93_RS07305;old_locus_tag=C9E93_07540 NZ_PYJV01000047.1 Protein Homology CDS 46563 47918 . + 0 ID=cds-WP_020437593.1;Parent=gene-C9E93_RS07305;Dbxref=GenBank:WP_020437593.1;Name=WP_020437593.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9E93_RS07305;product=alpha-galactosidase;protein_id=WP_020437593.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 48002 49432 . + . ID=gene-C9E93_RS07310;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9E93_RS07310;old_locus_tag=C9E93_07545 NZ_PYJV01000047.1 Protein Homology CDS 48002 49432 . + 0 ID=cds-WP_000028070.1;Parent=gene-C9E93_RS07310;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9E93_RS07310;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 49530 51176 . - . ID=gene-C9E93_RS07315;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=C9E93_RS07315;old_locus_tag=C9E93_07550 NZ_PYJV01000047.1 Protein Homology CDS 49530 51176 . - 0 ID=cds-WP_000037190.1;Parent=gene-C9E93_RS07315;Dbxref=GenBank:WP_000037190.1;Name=WP_000037190.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=C9E93_RS07315;product=class I fumarate hydratase FumA;protein_id=WP_000037190.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 51272 52612 . - . ID=gene-C9E93_RS07320;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=C9E93_RS07320;old_locus_tag=C9E93_07555 NZ_PYJV01000047.1 Protein Homology CDS 51272 52612 . - 0 ID=cds-WP_000899149.1;Parent=gene-C9E93_RS07320;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9E93_RS07320;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 52759 53025 . - . ID=gene-C9E93_RS07325;Name=C9E93_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07325;old_locus_tag=C9E93_07560 NZ_PYJV01000047.1 Protein Homology CDS 52759 53025 . - 0 ID=cds-WP_001584204.1;Parent=gene-C9E93_RS07325;Dbxref=GenBank:WP_001584204.1;Name=WP_001584204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9E93_RS07325;product=hypothetical protein;protein_id=WP_001584204.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 53342 54061 . - . ID=gene-C9E93_RS07330;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9E93_RS07330;old_locus_tag=C9E93_07565 NZ_PYJV01000047.1 Protein Homology CDS 53342 54061 . - 0 ID=cds-WP_000611307.1;Parent=gene-C9E93_RS07330;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9E93_RS07330;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 54058 55689 . - . ID=gene-C9E93_RS07335;Name=C9E93_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07335;old_locus_tag=C9E93_07570 NZ_PYJV01000047.1 Protein Homology CDS 54058 55689 . - 0 ID=cds-WP_135370017.1;Parent=gene-C9E93_RS07335;Dbxref=GenBank:WP_135370017.1;Name=WP_135370017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9E93_RS07335;product=sensor histidine kinase;protein_id=WP_135370017.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 56045 58474 . + . ID=gene-C9E93_RS07340;Name=C9E93_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07340;old_locus_tag=C9E93_07575 NZ_PYJV01000047.1 Protein Homology CDS 56045 58474 . + 0 ID=cds-WP_167851644.1;Parent=gene-C9E93_RS07340;Dbxref=GenBank:WP_167851644.1;Name=WP_167851644.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9E93_RS07340;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_167851644.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 58488 59114 . + . ID=gene-C9E93_RS07345;Name=C9E93_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07345;old_locus_tag=C9E93_07580 NZ_PYJV01000047.1 Protein Homology CDS 58488 59114 . + 0 ID=cds-WP_000816143.1;Parent=gene-C9E93_RS07345;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9E93_RS07345;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 59107 59880 . + . ID=gene-C9E93_RS07350;Name=C9E93_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07350;old_locus_tag=C9E93_07585 NZ_PYJV01000047.1 Protein Homology CDS 59107 59880 . + 0 ID=cds-WP_000544929.1;Parent=gene-C9E93_RS07350;Dbxref=GenBank:WP_000544929.1;Name=WP_000544929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9E93_RS07350;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544929.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 59955 60548 . + . ID=gene-C9E93_RS07355;Name=C9E93_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07355;old_locus_tag=C9E93_07590 NZ_PYJV01000047.1 Protein Homology CDS 59955 60548 . + 0 ID=cds-WP_369597816.1;Parent=gene-C9E93_RS07355;Dbxref=GenBank:WP_369597816.1;Name=WP_369597816.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=C9E93_RS07355;product=TorD/DmsD family molecular chaperone;protein_id=WP_369597816.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 60632 62032 . - . ID=gene-C9E93_RS07360;Name=C9E93_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07360;old_locus_tag=C9E93_07595 NZ_PYJV01000047.1 Protein Homology CDS 60632 62032 . - 0 ID=cds-WP_135370247.1;Parent=gene-C9E93_RS07360;Dbxref=GenBank:WP_135370247.1;Name=WP_135370247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9E93_RS07360;product=CBM96 family carbohydrate-binding protein;protein_id=WP_135370247.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 62336 63241 . + . ID=gene-C9E93_RS07365;Name=C9E93_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07365;old_locus_tag=C9E93_07600 NZ_PYJV01000047.1 Protein Homology CDS 62336 63241 . + 0 ID=cds-WP_001268195.1;Parent=gene-C9E93_RS07365;Dbxref=GenBank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9E93_RS07365;product=SdiA-regulated domain-containing protein;protein_id=WP_001268195.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 63536 63973 . - . ID=gene-C9E93_RS07370;Name=C9E93_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07370;old_locus_tag=C9E93_07605 NZ_PYJV01000047.1 Protein Homology CDS 63536 63973 . - 0 ID=cds-WP_220703807.1;Parent=gene-C9E93_RS07370;Dbxref=GenBank:WP_220703807.1;Name=WP_220703807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9E93_RS07370;product=Ig-like domain-containing protein;protein_id=WP_220703807.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 63975 64217 . + . ID=gene-C9E93_RS07380;Name=C9E93_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07380;old_locus_tag=C9E93_07615 NZ_PYJV01000047.1 Protein Homology CDS 63975 64217 . + 0 ID=cds-WP_255121241.1;Parent=gene-C9E93_RS07380;Dbxref=GenBank:WP_255121241.1;Name=WP_255121241.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=C9E93_RS07380;product=ATP-binding cassette domain-containing protein;protein_id=WP_255121241.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 64210 64497 . - . ID=gene-C9E93_RS07385;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9E93_RS07385;old_locus_tag=C9E93_07620 NZ_PYJV01000047.1 Protein Homology CDS 64210 64497 . - 0 ID=cds-WP_001541332.1;Parent=gene-C9E93_RS07385;Dbxref=GenBank:WP_001541332.1;Name=WP_001541332.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9E93_RS07385;product=transcriptional regulator RtsB;protein_id=WP_001541332.1;transl_table=11 NZ_PYJV01000047.1 RefSeq gene 64494 65369 . - . ID=gene-C9E93_RS07390;Name=C9E93_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07390;old_locus_tag=C9E93_07625 NZ_PYJV01000047.1 Protein Homology CDS 64494 65369 . - 0 ID=cds-WP_000921674.1;Parent=gene-C9E93_RS07390;Dbxref=GenBank:WP_000921674.1;Name=WP_000921674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9E93_RS07390;product=AraC family transcriptional regulator;protein_id=WP_000921674.1;transl_table=11 ##sequence-region NZ_PYJV01000057.1 1 64664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000057.1 RefSeq region 1 64664 . + . ID=NZ_PYJV01000057.1:1..64664;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000057.1 RefSeq gene 1 341 . + . ID=gene-C9E93_RS08725;Name=C9E93_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08725;old_locus_tag=C9E93_08970;partial=true;start_range=.,1 NZ_PYJV01000057.1 Protein Homology CDS 1 341 . + 2 ID=cds-WP_135400606.1;Parent=gene-C9E93_RS08725;Dbxref=GenBank:WP_135400606.1;Name=WP_135400606.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=C9E93_RS08725;partial=true;product=AAA family ATPase;protein_id=WP_135400606.1;start_range=.,1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 334 1338 . + . ID=gene-C9E93_RS08730;Name=C9E93_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08730;old_locus_tag=C9E93_08975 NZ_PYJV01000057.1 Protein Homology CDS 334 1338 . + 0 ID=cds-WP_052932362.1;Parent=gene-C9E93_RS08730;Dbxref=GenBank:WP_052932362.1;Name=WP_052932362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025844.6;locus_tag=C9E93_RS08730;product=DUF4435 domain-containing protein;protein_id=WP_052932362.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 1631 1855 . - . ID=gene-C9E93_RS08735;Name=C9E93_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08735;old_locus_tag=C9E93_08980 NZ_PYJV01000057.1 Protein Homology CDS 1631 1855 . - 0 ID=cds-WP_079802006.1;Parent=gene-C9E93_RS08735;Dbxref=GenBank:WP_079802006.1;Name=WP_079802006.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686456.1;locus_tag=C9E93_RS08735;product=helix-turn-helix domain-containing protein;protein_id=WP_079802006.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 1938 2168 . - . ID=gene-C9E93_RS08740;Name=C9E93_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08740;old_locus_tag=C9E93_08985 NZ_PYJV01000057.1 Protein Homology CDS 1938 2168 . - 0 ID=cds-WP_079802007.1;Parent=gene-C9E93_RS08740;Dbxref=GenBank:WP_079802007.1;Name=WP_079802007.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737277.1;locus_tag=C9E93_RS08740;product=helix-turn-helix domain-containing protein;protein_id=WP_079802007.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 2272 2547 . + . ID=gene-C9E93_RS08745;Name=C9E93_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08745;old_locus_tag=C9E93_08990 NZ_PYJV01000057.1 Protein Homology CDS 2272 2547 . + 0 ID=cds-WP_079802008.1;Parent=gene-C9E93_RS08745;Dbxref=GenBank:WP_079802008.1;Name=WP_079802008.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074456.1;locus_tag=C9E93_RS08745;product=helix-turn-helix domain-containing protein;protein_id=WP_079802008.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 2660 3181 . + . ID=gene-C9E93_RS08750;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9E93_RS08750;old_locus_tag=C9E93_08995 NZ_PYJV01000057.1 Protein Homology CDS 2660 3181 . + 0 ID=cds-WP_079802009.1;Parent=gene-C9E93_RS08750;Dbxref=GenBank:WP_079802009.1;Name=WP_079802009.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461677.1;locus_tag=C9E93_RS08750;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_079802009.1;transl_table=11 NZ_PYJV01000057.1 RefSeq pseudogene 3178 3556 . + . ID=gene-C9E93_RS23585;Name=C9E93_RS23585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23585;pseudo=true NZ_PYJV01000057.1 Protein Homology CDS 3178 3556 . + 0 ID=cds-C9E93_RS23585;Parent=gene-C9E93_RS23585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461678.1;locus_tag=C9E93_RS23585;product=PTS glucitol/sorbitol transporter subunit IIA;pseudo=true;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 3607 4533 . + . ID=gene-C9E93_RS08765;Name=C9E93_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08765;old_locus_tag=C9E93_09005 NZ_PYJV01000057.1 Protein Homology CDS 3607 4533 . + 0 ID=cds-WP_254866044.1;Parent=gene-C9E93_RS08765;Dbxref=GenBank:WP_254866044.1;Name=WP_254866044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077267.1;locus_tag=C9E93_RS08765;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_254866044.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 4544 5560 . + . ID=gene-C9E93_RS08770;Name=C9E93_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08770;old_locus_tag=C9E93_09010 NZ_PYJV01000057.1 Protein Homology CDS 4544 5560 . + 0 ID=cds-WP_135400608.1;Parent=gene-C9E93_RS08770;Dbxref=GenBank:WP_135400608.1;Name=WP_135400608.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737272.1;locus_tag=C9E93_RS08770;product=Gfo/Idh/MocA family protein;protein_id=WP_135400608.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 5596 6141 . - . ID=gene-C9E93_RS08775;Name=C9E93_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08775;old_locus_tag=C9E93_09015 NZ_PYJV01000057.1 Protein Homology CDS 5596 6141 . - 0 ID=cds-WP_052932368.1;Parent=gene-C9E93_RS08775;Dbxref=GenBank:WP_052932368.1;Name=WP_052932368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718702.1;locus_tag=C9E93_RS08775;product=hypothetical protein;protein_id=WP_052932368.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 6156 7196 . - . ID=gene-C9E93_RS08780;Name=C9E93_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08780;old_locus_tag=C9E93_09020 NZ_PYJV01000057.1 Protein Homology CDS 6156 7196 . - 0 ID=cds-WP_079802011.1;Parent=gene-C9E93_RS08780;Dbxref=GenBank:WP_079802011.1;Name=WP_079802011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617192.1;locus_tag=C9E93_RS08780;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_079802011.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 7392 7610 . - . ID=gene-C9E93_RS08785;Name=C9E93_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08785;old_locus_tag=C9E93_09025 NZ_PYJV01000057.1 Protein Homology CDS 7392 7610 . - 0 ID=cds-WP_072103759.1;Parent=gene-C9E93_RS08785;Dbxref=GenBank:WP_072103759.1;Name=WP_072103759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9E93_RS08785;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_072103759.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 8166 8474 . - . ID=gene-C9E93_RS08790;Name=C9E93_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08790;old_locus_tag=C9E93_09030 NZ_PYJV01000057.1 Protein Homology CDS 8166 8474 . - 0 ID=cds-WP_001199743.1;Parent=gene-C9E93_RS08790;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=C9E93_RS08790;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 8477 8716 . - . ID=gene-C9E93_RS08795;Name=C9E93_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08795;old_locus_tag=C9E93_09035 NZ_PYJV01000057.1 Protein Homology CDS 8477 8716 . - 0 ID=cds-WP_000016244.1;Parent=gene-C9E93_RS08795;Dbxref=GenBank:WP_000016244.1;Name=WP_000016244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=C9E93_RS08795;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000016244.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 8829 9077 . - . ID=gene-C9E93_RS08800;Name=C9E93_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08800;old_locus_tag=C9E93_09040 NZ_PYJV01000057.1 Protein Homology CDS 8829 9077 . - 0 ID=cds-WP_050068098.1;Parent=gene-C9E93_RS08800;Dbxref=GenBank:WP_050068098.1;Name=WP_050068098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=C9E93_RS08800;product=CopG family ribbon-helix-helix protein;protein_id=WP_050068098.1;transl_table=11 NZ_PYJV01000057.1 RefSeq pseudogene 9154 9462 . - . ID=gene-C9E93_RS08805;Name=C9E93_RS08805;end_range=9462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS08805;old_locus_tag=C9E93_09045;partial=true;pseudo=true NZ_PYJV01000057.1 Protein Homology CDS 9154 9462 . - 0 ID=cds-C9E93_RS08805;Parent=gene-C9E93_RS08805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=C9E93_RS08805;partial=true;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000057.1 RefSeq pseudogene 9482 10459 . - . ID=gene-C9E93_RS08810;Name=C9E93_RS08810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS08810;old_locus_tag=C9E93_09050;pseudo=true NZ_PYJV01000057.1 Protein Homology CDS 9482 10459 . - 0 ID=cds-C9E93_RS08810;Parent=gene-C9E93_RS08810;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041206064.1;locus_tag=C9E93_RS08810;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 10909 10993 . - . ID=gene-C9E93_RS08815;Name=C9E93_RS08815;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS08815;old_locus_tag=C9E93_09055 NZ_PYJV01000057.1 tRNAscan-SE tRNA 10909 10993 . - . ID=rna-C9E93_RS08815;Parent=gene-C9E93_RS08815;anticodon=(pos:complement(10957..10959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS08815;product=tRNA-Leu NZ_PYJV01000057.1 tRNAscan-SE exon 10909 10993 . - . ID=exon-C9E93_RS08815-1;Parent=rna-C9E93_RS08815;anticodon=(pos:complement(10957..10959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS08815;product=tRNA-Leu NZ_PYJV01000057.1 RefSeq gene 11216 12235 . + . ID=gene-C9E93_RS08820;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=C9E93_RS08820;old_locus_tag=C9E93_09060 NZ_PYJV01000057.1 Protein Homology CDS 11216 12235 . + 0 ID=cds-WP_135370098.1;Parent=gene-C9E93_RS08820;Dbxref=GenBank:WP_135370098.1;Name=WP_135370098.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9E93_RS08820;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_135370098.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 12263 12793 . - . ID=gene-C9E93_RS08825;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9E93_RS08825;old_locus_tag=C9E93_09065 NZ_PYJV01000057.1 Protein Homology CDS 12263 12793 . - 0 ID=cds-WP_000896756.1;Parent=gene-C9E93_RS08825;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9E93_RS08825;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 13010 14041 . + . ID=gene-C9E93_RS08830;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9E93_RS08830;old_locus_tag=C9E93_09070 NZ_PYJV01000057.1 Protein Homology CDS 13010 14041 . + 0 ID=cds-WP_023204850.1;Parent=gene-C9E93_RS08830;Dbxref=GenBank:WP_023204850.1;Name=WP_023204850.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9E93_RS08830;product=L-idonate 5-dehydrogenase;protein_id=WP_023204850.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 14066 14830 . + . ID=gene-C9E93_RS08835;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9E93_RS08835;old_locus_tag=C9E93_09075 NZ_PYJV01000057.1 Protein Homology CDS 14066 14830 . + 0 ID=cds-WP_000998684.1;Parent=gene-C9E93_RS08835;Dbxref=GenBank:WP_000998684.1;Name=WP_000998684.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9E93_RS08835;product=gluconate 5-dehydrogenase;protein_id=WP_000998684.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 14892 16211 . + . ID=gene-C9E93_RS08840;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9E93_RS08840;old_locus_tag=C9E93_09080 NZ_PYJV01000057.1 Protein Homology CDS 14892 16211 . + 0 ID=cds-WP_001128356.1;Parent=gene-C9E93_RS08840;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9E93_RS08840;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 16275 17273 . + . ID=gene-C9E93_RS08845;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=C9E93_RS08845;old_locus_tag=C9E93_09085 NZ_PYJV01000057.1 Protein Homology CDS 16275 17273 . + 0 ID=cds-WP_001244065.1;Parent=gene-C9E93_RS08845;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9E93_RS08845;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 17490 18572 . - . ID=gene-C9E93_RS08850;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9E93_RS08850;old_locus_tag=C9E93_09090 NZ_PYJV01000057.1 Protein Homology CDS 17490 18572 . - 0 ID=cds-WP_001182242.1;Parent=gene-C9E93_RS08850;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9E93_RS08850;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 18572 19672 . - . ID=gene-C9E93_RS08855;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9E93_RS08855;old_locus_tag=C9E93_09095 NZ_PYJV01000057.1 Protein Homology CDS 18572 19672 . - 0 ID=cds-WP_000584132.1;Parent=gene-C9E93_RS08855;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9E93_RS08855;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 19736 19786 . - . ID=gene-C9E93_RS23700;Name=C9E93_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23700 NZ_PYJV01000057.1 Protein Homology CDS 19736 19786 . - 0 ID=cds-WP_212724070.1;Parent=gene-C9E93_RS23700;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9E93_RS23700;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 20067 21578 . + . ID=gene-C9E93_RS08865;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9E93_RS08865;old_locus_tag=C9E93_09110 NZ_PYJV01000057.1 Protein Homology CDS 20067 21578 . + 0 ID=cds-WP_000397158.1;Parent=gene-C9E93_RS08865;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9E93_RS08865;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 21715 22158 . + . ID=gene-C9E93_RS08870;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9E93_RS08870;old_locus_tag=C9E93_09115 NZ_PYJV01000057.1 Protein Homology CDS 21715 22158 . + 0 ID=cds-WP_001523689.1;Parent=gene-C9E93_RS08870;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9E93_RS08870;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 22158 25013 . + . ID=gene-C9E93_RS08875;Name=C9E93_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08875;old_locus_tag=C9E93_09120 NZ_PYJV01000057.1 Protein Homology CDS 22158 25013 . + 0 ID=cds-WP_064043035.1;Parent=gene-C9E93_RS08875;Dbxref=GenBank:WP_064043035.1;Name=WP_064043035.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9E93_RS08875;product=valine--tRNA ligase;protein_id=WP_064043035.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 25155 26342 . - . ID=gene-C9E93_RS08880;Name=C9E93_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08880;old_locus_tag=C9E93_09125 NZ_PYJV01000057.1 Protein Homology CDS 25155 26342 . - 0 ID=cds-WP_001066974.1;Parent=gene-C9E93_RS08880;Dbxref=GenBank:WP_001066974.1;Name=WP_001066974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9E93_RS08880;product=YjgN family protein;protein_id=WP_001066974.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 26537 27040 . + . ID=gene-C9E93_RS08885;Name=C9E93_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08885;old_locus_tag=C9E93_09130 NZ_PYJV01000057.1 Protein Homology CDS 26537 27040 . + 0 ID=cds-WP_001519079.1;Parent=gene-C9E93_RS08885;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9E93_RS08885;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 27147 27635 . + . ID=gene-C9E93_RS08890;Name=C9E93_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08890;old_locus_tag=C9E93_09135 NZ_PYJV01000057.1 Protein Homology CDS 27147 27635 . + 0 ID=cds-WP_000826193.1;Parent=gene-C9E93_RS08890;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9E93_RS08890;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 27869 28681 . - . ID=gene-C9E93_RS08895;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9E93_RS08895;old_locus_tag=C9E93_09140 NZ_PYJV01000057.1 Protein Homology CDS 27869 28681 . - 0 ID=cds-WP_135370332.1;Parent=gene-C9E93_RS08895;Dbxref=GenBank:WP_135370332.1;Name=WP_135370332.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9E93_RS08895;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_135370332.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 28693 29109 . - . ID=gene-C9E93_RS08900;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9E93_RS08900;old_locus_tag=C9E93_09145 NZ_PYJV01000057.1 Protein Homology CDS 28693 29109 . - 0 ID=cds-WP_000002940.1;Parent=gene-C9E93_RS08900;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9E93_RS08900;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 29210 29305 . + . ID=gene-C9E93_RS24170;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=C9E93_RS24170 NZ_PYJV01000057.1 Protein Homology CDS 29210 29305 . + 0 ID=cds-WP_223148976.1;Parent=gene-C9E93_RS24170;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=C9E93_RS24170;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 29275 30279 . + . ID=gene-C9E93_RS08905;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E93_RS08905;old_locus_tag=C9E93_09150 NZ_PYJV01000057.1 Protein Homology CDS 29275 30279 . + 0 ID=cds-WP_000103041.1;Parent=gene-C9E93_RS08905;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9E93_RS08905;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 30353 30805 . - . ID=gene-C9E93_RS08910;Name=C9E93_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08910;old_locus_tag=C9E93_09155 NZ_PYJV01000057.1 Protein Homology CDS 30353 30805 . - 0 ID=cds-WP_023194706.1;Parent=gene-C9E93_RS08910;Dbxref=GenBank:WP_023194706.1;Name=WP_023194706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9E93_RS08910;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023194706.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 31481 32701 . + . ID=gene-C9E93_RS08920;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E93_RS08920;old_locus_tag=C9E93_09165 NZ_PYJV01000057.1 Protein Homology CDS 31481 32701 . + 0 ID=cds-WP_000410846.1;Parent=gene-C9E93_RS08920;Dbxref=GenBank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9E93_RS08920;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 32712 33644 . + . ID=gene-C9E93_RS08925;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9E93_RS08925;old_locus_tag=C9E93_09170 NZ_PYJV01000057.1 Protein Homology CDS 32712 33644 . + 0 ID=cds-WP_000428751.1;Parent=gene-C9E93_RS08925;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9E93_RS08925;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 33756 34760 . + . ID=gene-C9E93_RS08930;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E93_RS08930;old_locus_tag=C9E93_09175 NZ_PYJV01000057.1 Protein Homology CDS 33756 34760 . + 0 ID=cds-WP_000237031.1;Parent=gene-C9E93_RS08930;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9E93_RS08930;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 34816 36219 . + . ID=gene-C9E93_RS08935;Name=C9E93_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08935;old_locus_tag=C9E93_09180 NZ_PYJV01000057.1 Protein Homology CDS 34816 36219 . + 0 ID=cds-WP_000514424.1;Parent=gene-C9E93_RS08935;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9E93_RS08935;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 36406 36894 . + . ID=gene-C9E93_RS08940;Name=C9E93_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08940;old_locus_tag=C9E93_09185 NZ_PYJV01000057.1 Protein Homology CDS 36406 36894 . + 0 ID=cds-WP_000666051.1;Parent=gene-C9E93_RS08940;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9E93_RS08940;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_PYJV01000057.1 RefSeq pseudogene 36864 37005 . - . ID=gene-C9E93_RS08945;Name=C9E93_RS08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS08945;old_locus_tag=C9E93_09190;pseudo=true NZ_PYJV01000057.1 Protein Homology CDS 36864 37005 . - 0 ID=cds-C9E93_RS08945;Parent=gene-C9E93_RS08945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9E93_RS08945;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000057.1 RefSeq pseudogene 36985 37085 . + . ID=gene-C9E93_RS08950;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=pseudogene;locus_tag=C9E93_RS08950;old_locus_tag=C9E93_09195;pseudo=true NZ_PYJV01000057.1 Protein Homology CDS 36985 37085 . + 0 ID=cds-C9E93_RS08950;Parent=gene-C9E93_RS08950;Note=frameshifted;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9E93_RS08950;product=pyr operon leader peptide;pseudo=true;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 37121 38056 . + . ID=gene-C9E93_RS08955;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9E93_RS08955;old_locus_tag=C9E93_09200 NZ_PYJV01000057.1 Protein Homology CDS 37121 38056 . + 0 ID=cds-WP_000013055.1;Parent=gene-C9E93_RS08955;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9E93_RS08955;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 38069 38530 . + . ID=gene-C9E93_RS08960;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9E93_RS08960;old_locus_tag=C9E93_09205 NZ_PYJV01000057.1 Protein Homology CDS 38069 38530 . + 0 ID=cds-WP_000148567.1;Parent=gene-C9E93_RS08960;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9E93_RS08960;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 38607 38993 . + . ID=gene-C9E93_RS08965;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9E93_RS08965;old_locus_tag=C9E93_09210 NZ_PYJV01000057.1 Protein Homology CDS 38607 38993 . + 0 ID=cds-WP_000047544.1;Parent=gene-C9E93_RS08965;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9E93_RS08965;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 39068 39514 . + . ID=gene-C9E93_RS08970;Name=C9E93_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08970;old_locus_tag=C9E93_09215 NZ_PYJV01000057.1 Protein Homology CDS 39068 39514 . + 0 ID=cds-WP_135370582.1;Parent=gene-C9E93_RS08970;Dbxref=GenBank:WP_135370582.1;Name=WP_135370582.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=C9E93_RS08970;product=transposase;protein_id=WP_135370582.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 39630 42338 . - . ID=gene-C9E93_RS08975;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E93_RS08975;old_locus_tag=C9E93_09220 NZ_PYJV01000057.1 Protein Homology CDS 39630 42338 . - 0 ID=cds-WP_000920862.1;Parent=gene-C9E93_RS08975;Dbxref=GenBank:WP_000920862.1;Name=WP_000920862.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9E93_RS08975;product=magnesium-translocating P-type ATPase;protein_id=WP_000920862.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 42479 42577 . - . ID=gene-C9E93_RS24065;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=C9E93_RS24065 NZ_PYJV01000057.1 Protein Homology CDS 42479 42577 . - 0 ID=cds-WP_105789234.1;Parent=gene-C9E93_RS24065;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=C9E93_RS24065;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 42722 43669 . + . ID=gene-C9E93_RS08985;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9E93_RS08985;old_locus_tag=C9E93_09225 NZ_PYJV01000057.1 Protein Homology CDS 42722 43669 . + 0 ID=cds-WP_001181297.1;Parent=gene-C9E93_RS08985;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9E93_RS08985;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 43807 45225 . + . ID=gene-C9E93_RS08990;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9E93_RS08990;old_locus_tag=C9E93_09230 NZ_PYJV01000057.1 Protein Homology CDS 43807 45225 . + 0 ID=cds-WP_023232255.1;Parent=gene-C9E93_RS08990;Dbxref=GenBank:WP_023232255.1;Name=WP_023232255.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9E93_RS08990;product=PTS trehalose transporter subunit IIBC;protein_id=WP_023232255.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 45275 46927 . + . ID=gene-C9E93_RS08995;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9E93_RS08995;old_locus_tag=C9E93_09235 NZ_PYJV01000057.1 Protein Homology CDS 45275 46927 . + 0 ID=cds-WP_058331429.1;Parent=gene-C9E93_RS08995;Dbxref=GenBank:WP_058331429.1;Name=WP_058331429.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9E93_RS08995;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_058331429.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 47336 49474 . + . ID=gene-C9E93_RS09000;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9E93_RS09000;old_locus_tag=C9E93_09240 NZ_PYJV01000057.1 Protein Homology CDS 47336 49474 . + 0 ID=cds-WP_000187818.1;Parent=gene-C9E93_RS09000;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9E93_RS09000;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 49595 50059 . + . ID=gene-C9E93_RS09005;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9E93_RS09005;old_locus_tag=C9E93_09245 NZ_PYJV01000057.1 Protein Homology CDS 49595 50059 . + 0 ID=cds-WP_020898293.1;Parent=gene-C9E93_RS09005;Dbxref=GenBank:WP_020898293.1;Name=WP_020898293.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9E93_RS09005;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_020898293.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 50063 50347 . - . ID=gene-C9E93_RS09010;Name=C9E93_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09010;old_locus_tag=C9E93_09250 NZ_PYJV01000057.1 Protein Homology CDS 50063 50347 . - 0 ID=cds-WP_000220578.1;Parent=gene-C9E93_RS09010;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9E93_RS09010;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 50337 50579 . - . ID=gene-C9E93_RS09015;Name=C9E93_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09015;old_locus_tag=C9E93_09255 NZ_PYJV01000057.1 Protein Homology CDS 50337 50579 . - 0 ID=cds-WP_000212724.1;Parent=gene-C9E93_RS09015;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9E93_RS09015;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 50657 52570 . - . ID=gene-C9E93_RS09020;Name=C9E93_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09020;old_locus_tag=C9E93_09260 NZ_PYJV01000057.1 Protein Homology CDS 50657 52570 . - 0 ID=cds-WP_001212131.1;Parent=gene-C9E93_RS09020;Dbxref=GenBank:WP_001212131.1;Name=WP_001212131.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9E93_RS09020;product=BglG family transcription antiterminator;protein_id=WP_001212131.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 52587 53327 . - . ID=gene-C9E93_RS09025;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E93_RS09025;old_locus_tag=C9E93_09265 NZ_PYJV01000057.1 Protein Homology CDS 52587 53327 . - 0 ID=cds-WP_080087689.1;Parent=gene-C9E93_RS09025;Dbxref=GenBank:WP_080087689.1;Name=WP_080087689.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9E93_RS09025;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_080087689.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 53324 54442 . - . ID=gene-C9E93_RS09030;Name=C9E93_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09030;old_locus_tag=C9E93_09270 NZ_PYJV01000057.1 Protein Homology CDS 53324 54442 . - 0 ID=cds-WP_135370581.1;Parent=gene-C9E93_RS09030;Dbxref=GenBank:WP_135370581.1;Name=WP_135370581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9E93_RS09030;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_135370581.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 54426 55559 . - . ID=gene-C9E93_RS09035;Name=C9E93_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09035;old_locus_tag=C9E93_09275 NZ_PYJV01000057.1 Protein Homology CDS 54426 55559 . - 0 ID=cds-WP_135370580.1;Parent=gene-C9E93_RS09035;Dbxref=GenBank:WP_135370580.1;Name=WP_135370580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9E93_RS09035;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_135370580.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 55618 56262 . - . ID=gene-C9E93_RS09040;Name=C9E93_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09040;old_locus_tag=C9E93_09280 NZ_PYJV01000057.1 Protein Homology CDS 55618 56262 . - 0 ID=cds-WP_000392127.1;Parent=gene-C9E93_RS09040;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9E93_RS09040;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 56274 57050 . - . ID=gene-C9E93_RS09045;Name=C9E93_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09045;old_locus_tag=C9E93_09285 NZ_PYJV01000057.1 Protein Homology CDS 56274 57050 . - 0 ID=cds-WP_000478578.1;Parent=gene-C9E93_RS09045;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9E93_RS09045;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 57073 57375 . - . ID=gene-C9E93_RS09050;Name=C9E93_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09050;old_locus_tag=C9E93_09290 NZ_PYJV01000057.1 Protein Homology CDS 57073 57375 . - 0 ID=cds-WP_000975187.1;Parent=gene-C9E93_RS09050;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9E93_RS09050;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 57375 57737 . - . ID=gene-C9E93_RS09055;Name=C9E93_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09055;old_locus_tag=C9E93_09295 NZ_PYJV01000057.1 Protein Homology CDS 57375 57737 . - 0 ID=cds-WP_000435389.1;Parent=gene-C9E93_RS09055;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9E93_RS09055;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 57748 58086 . - . ID=gene-C9E93_RS09060;Name=C9E93_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09060;old_locus_tag=C9E93_09300 NZ_PYJV01000057.1 Protein Homology CDS 57748 58086 . - 0 ID=cds-WP_135370579.1;Parent=gene-C9E93_RS09060;Dbxref=GenBank:WP_135370579.1;Name=WP_135370579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9E93_RS09060;product=glycine dehydrogenase;protein_id=WP_135370579.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 58364 58750 . - . ID=gene-C9E93_RS09065;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9E93_RS09065;old_locus_tag=C9E93_09305 NZ_PYJV01000057.1 Protein Homology CDS 58364 58750 . - 0 ID=cds-WP_001232231.1;Parent=gene-C9E93_RS09065;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9E93_RS09065;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 58849 60201 . - . ID=gene-C9E93_RS09070;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=C9E93_RS09070;old_locus_tag=C9E93_09310 NZ_PYJV01000057.1 Protein Homology CDS 58849 60201 . - 0 ID=cds-WP_000852994.1;Parent=gene-C9E93_RS09070;Dbxref=GenBank:WP_000852994.1;Name=WP_000852994.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9E93_RS09070;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 60297 60848 . + . ID=gene-C9E93_RS09075;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=C9E93_RS09075;old_locus_tag=C9E93_09315 NZ_PYJV01000057.1 Protein Homology CDS 60297 60848 . + 0 ID=cds-WP_000166287.1;Parent=gene-C9E93_RS09075;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9E93_RS09075;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 60955 62328 . - . ID=gene-C9E93_RS09085;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9E93_RS09085;old_locus_tag=C9E93_09320 NZ_PYJV01000057.1 Protein Homology CDS 60955 62328 . - 0 ID=cds-WP_001219832.1;Parent=gene-C9E93_RS09085;Dbxref=GenBank:WP_001219832.1;Name=WP_001219832.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=C9E93_RS09085;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219832.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 62503 63501 . + . ID=gene-C9E93_RS09090;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9E93_RS09090;old_locus_tag=C9E93_09325 NZ_PYJV01000057.1 Protein Homology CDS 62503 63501 . + 0 ID=cds-WP_000853764.1;Parent=gene-C9E93_RS09090;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9E93_RS09090;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_PYJV01000057.1 RefSeq gene 63728 64258 . + . ID=gene-C9E93_RS09095;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9E93_RS09095;old_locus_tag=C9E93_09330 NZ_PYJV01000057.1 Protein Homology CDS 63728 64258 . + 0 ID=cds-WP_000055079.1;Parent=gene-C9E93_RS09095;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9E93_RS09095;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 ##sequence-region NZ_PYJV01000074.1 1 60437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000074.1 RefSeq region 1 60437 . + . ID=NZ_PYJV01000074.1:1..60437;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000074.1 RefSeq gene 121 687 . - . ID=gene-C9E93_RS12690;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9E93_RS12690;old_locus_tag=C9E93_13000 NZ_PYJV01000074.1 Protein Homology CDS 121 687 . - 0 ID=cds-WP_023993926.1;Parent=gene-C9E93_RS12690;Dbxref=GenBank:WP_023993926.1;Name=WP_023993926.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9E93_RS12690;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_023993926.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 877 1908 . + . ID=gene-C9E93_RS12695;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9E93_RS12695;old_locus_tag=C9E93_13005 NZ_PYJV01000074.1 Protein Homology CDS 877 1908 . + 0 ID=cds-WP_000594017.1;Parent=gene-C9E93_RS12695;Dbxref=GenBank:WP_000594017.1;Name=WP_000594017.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9E93_RS12695;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594017.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 1901 2554 . + . ID=gene-C9E93_RS12700;Name=C9E93_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12700;old_locus_tag=C9E93_13010 NZ_PYJV01000074.1 Protein Homology CDS 1901 2554 . + 0 ID=cds-WP_001287486.1;Parent=gene-C9E93_RS12700;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9E93_RS12700;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 2593 3408 . + . ID=gene-C9E93_RS12705;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9E93_RS12705;old_locus_tag=C9E93_13015 NZ_PYJV01000074.1 Protein Homology CDS 2593 3408 . + 0 ID=cds-WP_135370573.1;Parent=gene-C9E93_RS12705;Dbxref=GenBank:WP_135370573.1;Name=WP_135370573.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9E93_RS12705;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_135370573.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 3527 3931 . + . ID=gene-C9E93_RS12710;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9E93_RS12710;old_locus_tag=C9E93_13020 NZ_PYJV01000074.1 Protein Homology CDS 3527 3931 . + 0 ID=cds-WP_001202315.1;Parent=gene-C9E93_RS12710;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9E93_RS12710;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 3928 4635 . + . ID=gene-C9E93_RS12715;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9E93_RS12715;old_locus_tag=C9E93_13025 NZ_PYJV01000074.1 Protein Homology CDS 3928 4635 . + 0 ID=cds-WP_000093988.1;Parent=gene-C9E93_RS12715;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9E93_RS12715;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 4746 6464 . + . ID=gene-C9E93_RS12720;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9E93_RS12720;old_locus_tag=C9E93_13030 NZ_PYJV01000074.1 Protein Homology CDS 4746 6464 . + 0 ID=cds-WP_001260688.1;Parent=gene-C9E93_RS12720;Dbxref=GenBank:WP_001260688.1;Name=WP_001260688.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9E93_RS12720;product=proline--tRNA ligase;protein_id=WP_001260688.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 6538 7239 . - . ID=gene-C9E93_RS12725;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9E93_RS12725;old_locus_tag=C9E93_13035 NZ_PYJV01000074.1 Protein Homology CDS 6538 7239 . - 0 ID=cds-WP_000252575.1;Parent=gene-C9E93_RS12725;Dbxref=GenBank:WP_000252575.1;Name=WP_000252575.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9E93_RS12725;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252575.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 7271 7693 . - . ID=gene-C9E93_RS12730;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9E93_RS12730;old_locus_tag=C9E93_13040 NZ_PYJV01000074.1 Protein Homology CDS 7271 7693 . - 0 ID=cds-WP_000560527.1;Parent=gene-C9E93_RS12730;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9E93_RS12730;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 7690 8235 . - . ID=gene-C9E93_RS12735;Name=C9E93_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12735;old_locus_tag=C9E93_13045 NZ_PYJV01000074.1 Protein Homology CDS 7690 8235 . - 0 ID=cds-WP_001185319.1;Parent=gene-C9E93_RS12735;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9E93_RS12735;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 8433 8633 . + . ID=gene-C9E93_RS12740;Name=C9E93_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12740;old_locus_tag=C9E93_13050 NZ_PYJV01000074.1 Protein Homology CDS 8433 8633 . + 0 ID=cds-WP_001518678.1;Parent=gene-C9E93_RS12740;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9E93_RS12740;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 8620 8880 . + . ID=gene-C9E93_RS12745;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9E93_RS12745;old_locus_tag=C9E93_13055 NZ_PYJV01000074.1 Protein Homology CDS 8620 8880 . + 0 ID=cds-WP_000062330.1;Parent=gene-C9E93_RS12745;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9E93_RS12745;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 8964 10256 . - . ID=gene-C9E93_RS12750;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9E93_RS12750;old_locus_tag=C9E93_13060 NZ_PYJV01000074.1 Protein Homology CDS 8964 10256 . - 0 ID=cds-WP_000210056.1;Parent=gene-C9E93_RS12750;Dbxref=GenBank:WP_000210056.1;Name=WP_000210056.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9E93_RS12750;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210056.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 10319 10708 . - . ID=gene-C9E93_RS12755;Name=C9E93_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12755;old_locus_tag=C9E93_13065 NZ_PYJV01000074.1 Protein Homology CDS 10319 10708 . - 0 ID=cds-WP_000901086.1;Parent=gene-C9E93_RS12755;Dbxref=GenBank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9E93_RS12755;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 10764 12905 . - . ID=gene-C9E93_RS12760;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9E93_RS12760;old_locus_tag=C9E93_13070 NZ_PYJV01000074.1 Protein Homology CDS 10764 12905 . - 0 ID=cds-WP_135370574.1;Parent=gene-C9E93_RS12760;Dbxref=GenBank:WP_135370574.1;Name=WP_135370574.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9E93_RS12760;product=lysine decarboxylase LdcC;protein_id=WP_135370574.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 12981 14744 . - . ID=gene-C9E93_RS12765;Name=C9E93_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12765;old_locus_tag=C9E93_13075 NZ_PYJV01000074.1 Protein Homology CDS 12981 14744 . - 0 ID=cds-WP_000524168.1;Parent=gene-C9E93_RS12765;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9E93_RS12765;product=chitinase;protein_id=WP_000524168.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 14924 15883 . - . ID=gene-C9E93_RS12770;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9E93_RS12770;old_locus_tag=C9E93_13080 NZ_PYJV01000074.1 Protein Homology CDS 14924 15883 . - 0 ID=cds-WP_000055753.1;Parent=gene-C9E93_RS12770;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9E93_RS12770;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 15896 19378 . - . ID=gene-C9E93_RS12775;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9E93_RS12775;old_locus_tag=C9E93_13085 NZ_PYJV01000074.1 Protein Homology CDS 15896 19378 . - 0 ID=cds-WP_001294818.1;Parent=gene-C9E93_RS12775;Dbxref=GenBank:WP_001294818.1;Name=WP_001294818.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=C9E93_RS12775;product=DNA polymerase III subunit alpha;protein_id=WP_001294818.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 19402 19998 . - . ID=gene-C9E93_RS12780;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9E93_RS12780;old_locus_tag=C9E93_13090 NZ_PYJV01000074.1 Protein Homology CDS 19402 19998 . - 0 ID=cds-WP_000569412.1;Parent=gene-C9E93_RS12780;Dbxref=GenBank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9E93_RS12780;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 19995 21143 . - . ID=gene-C9E93_RS12785;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9E93_RS12785;old_locus_tag=C9E93_13095 NZ_PYJV01000074.1 Protein Homology CDS 19995 21143 . - 0 ID=cds-WP_135370575.1;Parent=gene-C9E93_RS12785;Dbxref=GenBank:WP_135370575.1;Name=WP_135370575.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9E93_RS12785;product=lipid-A-disaccharide synthase;protein_id=WP_135370575.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 21143 21931 . - . ID=gene-C9E93_RS12790;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9E93_RS12790;old_locus_tag=C9E93_13100 NZ_PYJV01000074.1 Protein Homology CDS 21143 21931 . - 0 ID=cds-WP_000565950.1;Parent=gene-C9E93_RS12790;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9E93_RS12790;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 21935 22390 . - . ID=gene-C9E93_RS12795;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9E93_RS12795;old_locus_tag=C9E93_13105 NZ_PYJV01000074.1 Protein Homology CDS 21935 22390 . - 0 ID=cds-WP_000210741.1;Parent=gene-C9E93_RS12795;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9E93_RS12795;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 22496 23521 . - . ID=gene-C9E93_RS12800;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9E93_RS12800;old_locus_tag=C9E93_13110 NZ_PYJV01000074.1 Protein Homology CDS 22496 23521 . - 0 ID=cds-WP_001139265.1;Parent=gene-C9E93_RS12800;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9E93_RS12800;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 23525 24010 . - . ID=gene-C9E93_RS12805;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9E93_RS12805;old_locus_tag=C9E93_13115 NZ_PYJV01000074.1 Protein Homology CDS 23525 24010 . - 0 ID=cds-WP_000758966.1;Parent=gene-C9E93_RS12805;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9E93_RS12805;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 24133 26544 . - . ID=gene-C9E93_RS12810;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9E93_RS12810;old_locus_tag=C9E93_13120 NZ_PYJV01000074.1 Protein Homology CDS 24133 26544 . - 0 ID=cds-WP_001240922.1;Parent=gene-C9E93_RS12810;Dbxref=GenBank:WP_001240922.1;Name=WP_001240922.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=C9E93_RS12810;product=outer membrane protein assembly factor BamA;protein_id=WP_001240922.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 26576 27928 . - . ID=gene-C9E93_RS12815;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9E93_RS12815;old_locus_tag=C9E93_13125 NZ_PYJV01000074.1 Protein Homology CDS 26576 27928 . - 0 ID=cds-WP_000949017.1;Parent=gene-C9E93_RS12815;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9E93_RS12815;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 27940 28797 . - . ID=gene-C9E93_RS12820;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9E93_RS12820;old_locus_tag=C9E93_13130 NZ_PYJV01000074.1 Protein Homology CDS 27940 28797 . - 0 ID=cds-WP_000922422.1;Parent=gene-C9E93_RS12820;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9E93_RS12820;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 28810 29568 . - . ID=gene-C9E93_RS12825;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9E93_RS12825;old_locus_tag=C9E93_13135 NZ_PYJV01000074.1 Protein Homology CDS 28810 29568 . - 0 ID=cds-WP_000947413.1;Parent=gene-C9E93_RS12825;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9E93_RS12825;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 29881 31077 . - . ID=gene-C9E93_RS12830;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=C9E93_RS12830;old_locus_tag=C9E93_13145 NZ_PYJV01000074.1 Protein Homology CDS 29881 31077 . - 0 ID=cds-WP_000811905.1;Parent=gene-C9E93_RS12830;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9E93_RS12830;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 31218 31775 . - . ID=gene-C9E93_RS12835;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9E93_RS12835;old_locus_tag=C9E93_13150 NZ_PYJV01000074.1 Protein Homology CDS 31218 31775 . - 0 ID=cds-WP_000622423.1;Parent=gene-C9E93_RS12835;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9E93_RS12835;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 31922 32647 . - . ID=gene-C9E93_RS12840;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9E93_RS12840;old_locus_tag=C9E93_13155 NZ_PYJV01000074.1 Protein Homology CDS 31922 32647 . - 0 ID=cds-WP_000224567.1;Parent=gene-C9E93_RS12840;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9E93_RS12840;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 32792 33643 . - . ID=gene-C9E93_RS12845;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9E93_RS12845;old_locus_tag=C9E93_13160 NZ_PYJV01000074.1 Protein Homology CDS 32792 33643 . - 0 ID=cds-WP_000808106.1;Parent=gene-C9E93_RS12845;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9E93_RS12845;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 33901 34626 . - . ID=gene-C9E93_RS12850;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9E93_RS12850;old_locus_tag=C9E93_13170 NZ_PYJV01000074.1 Protein Homology CDS 33901 34626 . - 0 ID=cds-WP_000246886.1;Parent=gene-C9E93_RS12850;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9E93_RS12850;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 34975 36702 . + . ID=gene-C9E93_RS12855;Name=C9E93_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12855;old_locus_tag=C9E93_13175 NZ_PYJV01000074.1 GeneMarkS-2+ CDS 34975 36702 . + 0 ID=cds-WP_024157446.1;Parent=gene-C9E93_RS12855;Dbxref=GenBank:WP_024157446.1;Name=WP_024157446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS12855;product=hypothetical protein;protein_id=WP_024157446.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 36836 37630 . + . ID=gene-C9E93_RS12860;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9E93_RS12860;old_locus_tag=C9E93_13180 NZ_PYJV01000074.1 Protein Homology CDS 36836 37630 . + 0 ID=cds-WP_001018214.1;Parent=gene-C9E93_RS12860;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9E93_RS12860;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 37868 40540 . + . ID=gene-C9E93_RS12865;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9E93_RS12865;old_locus_tag=C9E93_13190 NZ_PYJV01000074.1 Protein Homology CDS 37868 40540 . + 0 ID=cds-WP_135370576.1;Parent=gene-C9E93_RS12865;Dbxref=GenBank:WP_135370576.1;Name=WP_135370576.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9E93_RS12865;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_135370576.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 40570 41394 . + . ID=gene-C9E93_RS12870;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9E93_RS12870;old_locus_tag=C9E93_13195 NZ_PYJV01000074.1 Protein Homology CDS 40570 41394 . + 0 ID=cds-WP_001186673.1;Parent=gene-C9E93_RS12870;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9E93_RS12870;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 41431 42732 . - . ID=gene-C9E93_RS12875;Name=C9E93_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12875;old_locus_tag=C9E93_13200 NZ_PYJV01000074.1 Protein Homology CDS 41431 42732 . - 0 ID=cds-WP_000017195.1;Parent=gene-C9E93_RS12875;Dbxref=GenBank:WP_000017195.1;Name=WP_000017195.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9E93_RS12875;product=MFS transporter;protein_id=WP_000017195.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 42979 43365 . + . ID=gene-C9E93_RS12880;Name=C9E93_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12880;old_locus_tag=C9E93_13205 NZ_PYJV01000074.1 Protein Homology CDS 42979 43365 . + 0 ID=cds-WP_000272193.1;Parent=gene-C9E93_RS12880;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9E93_RS12880;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 43454 44611 . - . ID=gene-C9E93_RS12885;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9E93_RS12885;old_locus_tag=C9E93_13210 NZ_PYJV01000074.1 Protein Homology CDS 43454 44611 . - 0 ID=cds-WP_000929458.1;Parent=gene-C9E93_RS12885;Dbxref=GenBank:WP_000929458.1;Name=WP_000929458.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9E93_RS12885;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929458.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 44764 46191 . - . ID=gene-C9E93_RS12890;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9E93_RS12890;old_locus_tag=C9E93_13215 NZ_PYJV01000074.1 Protein Homology CDS 44764 46191 . - 0 ID=cds-WP_000753958.1;Parent=gene-C9E93_RS12890;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9E93_RS12890;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 46321 47838 . - . ID=gene-C9E93_RS12895;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9E93_RS12895;old_locus_tag=C9E93_13220 NZ_PYJV01000074.1 Protein Homology CDS 46321 47838 . - 0 ID=cds-WP_000146450.1;Parent=gene-C9E93_RS12895;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9E93_RS12895;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 47923 48621 . + . ID=gene-C9E93_RS12900;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9E93_RS12900;old_locus_tag=C9E93_13225 NZ_PYJV01000074.1 Protein Homology CDS 47923 48621 . + 0 ID=cds-WP_000689824.1;Parent=gene-C9E93_RS12900;Dbxref=GenBank:WP_000689824.1;Name=WP_000689824.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9E93_RS12900;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689824.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 48614 49414 . + . ID=gene-C9E93_RS12905;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9E93_RS12905;old_locus_tag=C9E93_13230 NZ_PYJV01000074.1 Protein Homology CDS 48614 49414 . + 0 ID=cds-WP_080232360.1;Parent=gene-C9E93_RS12905;Dbxref=GenBank:WP_080232360.1;Name=WP_080232360.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9E93_RS12905;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_080232360.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 49451 50074 . + . ID=gene-C9E93_RS12910;Name=C9E93_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12910;old_locus_tag=C9E93_13235 NZ_PYJV01000074.1 Protein Homology CDS 49451 50074 . + 0 ID=cds-WP_000964234.1;Parent=gene-C9E93_RS12910;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9E93_RS12910;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 50175 50519 . - . ID=gene-C9E93_RS12915;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9E93_RS12915;old_locus_tag=C9E93_13240 NZ_PYJV01000074.1 Protein Homology CDS 50175 50519 . - 0 ID=cds-WP_001278668.1;Parent=gene-C9E93_RS12915;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9E93_RS12915;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 50601 52022 . - . ID=gene-C9E93_RS12920;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9E93_RS12920;old_locus_tag=C9E93_13245 NZ_PYJV01000074.1 Protein Homology CDS 50601 52022 . - 0 ID=cds-WP_000845430.1;Parent=gene-C9E93_RS12920;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9E93_RS12920;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 52192 53472 . + . ID=gene-C9E93_RS12925;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9E93_RS12925;old_locus_tag=C9E93_13250 NZ_PYJV01000074.1 Protein Homology CDS 52192 53472 . + 0 ID=cds-WP_000045262.1;Parent=gene-C9E93_RS12925;Dbxref=GenBank:WP_000045262.1;Name=WP_000045262.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9E93_RS12925;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045262.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 53580 54419 . - . ID=gene-C9E93_RS12930;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9E93_RS12930;old_locus_tag=C9E93_13255 NZ_PYJV01000074.1 Protein Homology CDS 53580 54419 . - 0 ID=cds-WP_000691868.1;Parent=gene-C9E93_RS12930;Dbxref=GenBank:WP_000691868.1;Name=WP_000691868.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9E93_RS12930;product=fimbrial adhesin StfH;protein_id=WP_000691868.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 54419 54949 . - . ID=gene-C9E93_RS12935;Name=C9E93_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12935;old_locus_tag=C9E93_13260 NZ_PYJV01000074.1 Protein Homology CDS 54419 54949 . - 0 ID=cds-WP_000239536.1;Parent=gene-C9E93_RS12935;Dbxref=GenBank:WP_000239536.1;Name=WP_000239536.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9E93_RS12935;product=fimbrial protein;protein_id=WP_000239536.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 54949 55425 . - . ID=gene-C9E93_RS12940;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9E93_RS12940;old_locus_tag=C9E93_13265 NZ_PYJV01000074.1 Protein Homology CDS 54949 55425 . - 0 ID=cds-WP_000737995.1;Parent=gene-C9E93_RS12940;Dbxref=GenBank:WP_000737995.1;Name=WP_000737995.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725047.1;locus_tag=C9E93_RS12940;product=fimbrial minor subunit StfF;protein_id=WP_000737995.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 55422 55934 . - . ID=gene-C9E93_RS12945;Name=C9E93_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12945;old_locus_tag=C9E93_13270 NZ_PYJV01000074.1 Protein Homology CDS 55422 55934 . - 0 ID=cds-WP_001250314.1;Parent=gene-C9E93_RS12945;Dbxref=GenBank:WP_001250314.1;Name=WP_001250314.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9E93_RS12945;product=fimbrial protein;protein_id=WP_001250314.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 55953 56705 . - . ID=gene-C9E93_RS12950;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9E93_RS12950;old_locus_tag=C9E93_13275 NZ_PYJV01000074.1 Protein Homology CDS 55953 56705 . - 0 ID=cds-WP_000982728.1;Parent=gene-C9E93_RS12950;Dbxref=GenBank:WP_000982728.1;Name=WP_000982728.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9E93_RS12950;product=fimbrial chaperone StfD;protein_id=WP_000982728.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 56723 59380 . - . ID=gene-C9E93_RS12955;Name=C9E93_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12955;old_locus_tag=C9E93_13280 NZ_PYJV01000074.1 Protein Homology CDS 56723 59380 . - 0 ID=cds-WP_135370577.1;Parent=gene-C9E93_RS12955;Dbxref=GenBank:WP_135370577.1;Name=WP_135370577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9E93_RS12955;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135370577.1;transl_table=11 NZ_PYJV01000074.1 RefSeq gene 59466 60026 . - . ID=gene-C9E93_RS12960;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=C9E93_RS12960;old_locus_tag=C9E93_13285 NZ_PYJV01000074.1 Protein Homology CDS 59466 60026 . - 0 ID=cds-WP_135370578.1;Parent=gene-C9E93_RS12960;Dbxref=GenBank:WP_135370578.1;Name=WP_135370578.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9E93_RS12960;product=fimbrial major subunit StfA;protein_id=WP_135370578.1;transl_table=11 ##sequence-region NZ_PYJV01000028.1 1 59251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000028.1 RefSeq region 1 59251 . + . ID=NZ_PYJV01000028.1:1..59251;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000028.1 RefSeq gene 1 1156 . - . ID=gene-C9E93_RS03980;Name=C9E93_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03980;old_locus_tag=C9E93_04130;partial=true;start_range=.,1 NZ_PYJV01000028.1 Protein Homology CDS 1 1156 . - 0 ID=cds-WP_135400588.1;Parent=gene-C9E93_RS03980;Dbxref=GenBank:WP_135400588.1;Name=WP_135400588.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668046.1;locus_tag=C9E93_RS03980;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_135400588.1;start_range=.,1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 1213 2205 . - . ID=gene-C9E93_RS03985;Name=C9E93_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03985;old_locus_tag=C9E93_04135 NZ_PYJV01000028.1 Protein Homology CDS 1213 2205 . - 0 ID=cds-WP_135370065.1;Parent=gene-C9E93_RS03985;Dbxref=GenBank:WP_135370065.1;Name=WP_135370065.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9E93_RS03985;product=transketolase family protein;protein_id=WP_135370065.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 2205 3050 . - . ID=gene-C9E93_RS03990;Name=C9E93_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03990;old_locus_tag=C9E93_04140 NZ_PYJV01000028.1 Protein Homology CDS 2205 3050 . - 0 ID=cds-WP_000784292.1;Parent=gene-C9E93_RS03990;Dbxref=GenBank:WP_000784292.1;Name=WP_000784292.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=C9E93_RS03990;product=transketolase;protein_id=WP_000784292.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 3064 3813 . - . ID=gene-C9E93_RS03995;Name=C9E93_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03995;old_locus_tag=C9E93_04145 NZ_PYJV01000028.1 Protein Homology CDS 3064 3813 . - 0 ID=cds-WP_135370066.1;Parent=gene-C9E93_RS03995;Dbxref=GenBank:WP_135370066.1;Name=WP_135370066.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=C9E93_RS03995;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_135370066.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 3864 5195 . - . ID=gene-C9E93_RS04000;Name=C9E93_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04000;old_locus_tag=C9E93_04150 NZ_PYJV01000028.1 Protein Homology CDS 3864 5195 . - 0 ID=cds-WP_001518324.1;Parent=gene-C9E93_RS04000;Dbxref=GenBank:WP_001518324.1;Name=WP_001518324.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=C9E93_RS04000;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 5534 6457 . + . ID=gene-C9E93_RS04005;Name=C9E93_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04005;old_locus_tag=C9E93_04155 NZ_PYJV01000028.1 Protein Homology CDS 5534 6457 . + 0 ID=cds-WP_001075547.1;Parent=gene-C9E93_RS04005;Dbxref=GenBank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=C9E93_RS04005;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 6531 7205 . + . ID=gene-C9E93_RS04010;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9E93_RS04010;old_locus_tag=C9E93_04160 NZ_PYJV01000028.1 Protein Homology CDS 6531 7205 . + 0 ID=cds-WP_001025254.1;Parent=gene-C9E93_RS04010;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9E93_RS04010;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 7205 8200 . + . ID=gene-C9E93_RS04015;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9E93_RS04015;old_locus_tag=C9E93_04165 NZ_PYJV01000028.1 Protein Homology CDS 7205 8200 . + 0 ID=cds-WP_000743436.1;Parent=gene-C9E93_RS04015;Dbxref=GenBank:WP_000743436.1;Name=WP_000743436.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9E93_RS04015;product=secretion protein HlyD;protein_id=WP_000743436.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 8193 9929 . + . ID=gene-C9E93_RS04020;Name=C9E93_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04020;old_locus_tag=C9E93_04170 NZ_PYJV01000028.1 Protein Homology CDS 8193 9929 . + 0 ID=cds-WP_001287616.1;Parent=gene-C9E93_RS04020;Dbxref=GenBank:WP_001287616.1;Name=WP_001287616.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9E93_RS04020;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287616.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 9922 11052 . + . ID=gene-C9E93_RS04025;Name=C9E93_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04025;old_locus_tag=C9E93_04175 NZ_PYJV01000028.1 Protein Homology CDS 9922 11052 . + 0 ID=cds-WP_000045762.1;Parent=gene-C9E93_RS04025;Dbxref=GenBank:WP_000045762.1;Name=WP_000045762.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9E93_RS04025;product=ABC transporter permease;protein_id=WP_000045762.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 11168 12274 . + . ID=gene-C9E93_RS04030;Name=C9E93_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04030;old_locus_tag=C9E93_04180 NZ_PYJV01000028.1 Protein Homology CDS 11168 12274 . + 0 ID=cds-WP_000469050.1;Parent=gene-C9E93_RS04030;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9E93_RS04030;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 12236 12646 . - . ID=gene-C9E93_RS04035;Name=C9E93_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04035;old_locus_tag=C9E93_04185 NZ_PYJV01000028.1 Protein Homology CDS 12236 12646 . - 0 ID=cds-WP_000871970.1;Parent=gene-C9E93_RS04035;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9E93_RS04035;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 12779 13537 . + . ID=gene-C9E93_RS04040;Name=C9E93_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04040;old_locus_tag=C9E93_04190 NZ_PYJV01000028.1 Protein Homology CDS 12779 13537 . + 0 ID=cds-WP_000192039.1;Parent=gene-C9E93_RS04040;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9E93_RS04040;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 13534 14775 . + . ID=gene-C9E93_RS04045;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9E93_RS04045;old_locus_tag=C9E93_04195 NZ_PYJV01000028.1 Protein Homology CDS 13534 14775 . + 0 ID=cds-WP_000649639.1;Parent=gene-C9E93_RS04045;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9E93_RS04045;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 14775 15737 . + . ID=gene-C9E93_RS04050;Name=C9E93_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04050;old_locus_tag=C9E93_04200 NZ_PYJV01000028.1 Protein Homology CDS 14775 15737 . + 0 ID=cds-WP_001129817.1;Parent=gene-C9E93_RS04050;Dbxref=GenBank:WP_001129817.1;Name=WP_001129817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9E93_RS04050;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129817.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 15740 16300 . - . ID=gene-C9E93_RS04055;Name=C9E93_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04055;old_locus_tag=C9E93_04205 NZ_PYJV01000028.1 Protein Homology CDS 15740 16300 . - 0 ID=cds-WP_001052197.1;Parent=gene-C9E93_RS04055;Dbxref=GenBank:WP_001052197.1;Name=WP_001052197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9E93_RS04055;product=hypothetical protein;protein_id=WP_001052197.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 16308 16916 . - . ID=gene-C9E93_RS04060;Name=C9E93_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04060;old_locus_tag=C9E93_04210 NZ_PYJV01000028.1 Protein Homology CDS 16308 16916 . - 0 ID=cds-WP_077905247.1;Parent=gene-C9E93_RS04060;Dbxref=GenBank:WP_077905247.1;Name=WP_077905247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9E93_RS04060;product=hypothetical protein;protein_id=WP_077905247.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 16940 17647 . - . ID=gene-C9E93_RS04065;Name=C9E93_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04065;old_locus_tag=C9E93_04215 NZ_PYJV01000028.1 Protein Homology CDS 16940 17647 . - 0 ID=cds-WP_135370067.1;Parent=gene-C9E93_RS04065;Dbxref=GenBank:WP_135370067.1;Name=WP_135370067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9E93_RS04065;product=Bax inhibitor-1 family protein;protein_id=WP_135370067.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 17793 18497 . - . ID=gene-C9E93_RS04070;Name=C9E93_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04070;old_locus_tag=C9E93_04225 NZ_PYJV01000028.1 Protein Homology CDS 17793 18497 . - 0 ID=cds-WP_000373611.1;Parent=gene-C9E93_RS04070;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9E93_RS04070;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 18545 18997 . - . ID=gene-C9E93_RS04075;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9E93_RS04075;old_locus_tag=C9E93_04230 NZ_PYJV01000028.1 Protein Homology CDS 18545 18997 . - 0 ID=cds-WP_000545202.1;Parent=gene-C9E93_RS04075;Dbxref=GenBank:WP_000545202.1;Name=WP_000545202.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9E93_RS04075;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545202.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 18999 19244 . - . ID=gene-C9E93_RS04080;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9E93_RS04080;old_locus_tag=C9E93_04235 NZ_PYJV01000028.1 Protein Homology CDS 18999 19244 . - 0 ID=cds-WP_000598599.1;Parent=gene-C9E93_RS04080;Dbxref=GenBank:WP_000598599.1;Name=WP_000598599.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9E93_RS04080;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598599.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 19237 19722 . - . ID=gene-C9E93_RS04085;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9E93_RS04085;old_locus_tag=C9E93_04240 NZ_PYJV01000028.1 Protein Homology CDS 19237 19722 . - 0 ID=cds-WP_000080894.1;Parent=gene-C9E93_RS04085;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9E93_RS04085;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 19725 20237 . - . ID=gene-C9E93_RS04090;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9E93_RS04090;old_locus_tag=C9E93_04245 NZ_PYJV01000028.1 Protein Homology CDS 19725 20237 . - 0 ID=cds-WP_000084604.1;Parent=gene-C9E93_RS04090;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9E93_RS04090;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 20259 21248 . - . ID=gene-C9E93_RS04095;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9E93_RS04095;old_locus_tag=C9E93_04250 NZ_PYJV01000028.1 Protein Homology CDS 20259 21248 . - 0 ID=cds-WP_000168180.1;Parent=gene-C9E93_RS04095;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9E93_RS04095;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_PYJV01000028.1 cmsearch riboswitch 21236 21380 . - . ID=id-NZ_PYJV01000028.1:21236..21380;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000028.1 RefSeq gene 21645 22553 . + . ID=gene-C9E93_RS04100;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9E93_RS04100;old_locus_tag=C9E93_04255 NZ_PYJV01000028.1 Protein Homology CDS 21645 22553 . + 0 ID=cds-WP_135370068.1;Parent=gene-C9E93_RS04100;Dbxref=GenBank:WP_135370068.1;Name=WP_135370068.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9E93_RS04100;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_135370068.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 22648 24912 . - . ID=gene-C9E93_RS04105;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=C9E93_RS04105;old_locus_tag=C9E93_04260 NZ_PYJV01000028.1 Protein Homology CDS 22648 24912 . - 0 ID=cds-WP_135370069.1;Parent=gene-C9E93_RS04105;Dbxref=GenBank:WP_135370069.1;Name=WP_135370069.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523006.1;locus_tag=C9E93_RS04105;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_135370069.1;transl_table=11 NZ_PYJV01000028.1 RefSeq pseudogene 24920 25094 . - . ID=gene-C9E93_RS23850;Name=C9E93_RS23850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23850;pseudo=true NZ_PYJV01000028.1 Protein Homology CDS 24920 25094 . - 0 ID=cds-C9E93_RS23850;Parent=gene-C9E93_RS23850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9E93_RS23850;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 25401 27422 . - . ID=gene-C9E93_RS04110;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9E93_RS04110;old_locus_tag=C9E93_04265 NZ_PYJV01000028.1 Protein Homology CDS 25401 27422 . - 0 ID=cds-WP_000042502.1;Parent=gene-C9E93_RS04110;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9E93_RS04110;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 28074 28760 . - . ID=gene-C9E93_RS04120;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E93_RS04120;old_locus_tag=C9E93_04275 NZ_PYJV01000028.1 Protein Homology CDS 28074 28760 . - 0 ID=cds-WP_135370070.1;Parent=gene-C9E93_RS04120;Dbxref=GenBank:WP_135370070.1;Name=WP_135370070.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9E93_RS04120;product=dethiobiotin synthase;protein_id=WP_135370070.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 28753 29508 . - . ID=gene-C9E93_RS04125;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9E93_RS04125;old_locus_tag=C9E93_04280 NZ_PYJV01000028.1 Protein Homology CDS 28753 29508 . - 0 ID=cds-WP_000079911.1;Parent=gene-C9E93_RS04125;Dbxref=GenBank:WP_000079911.1;Name=WP_000079911.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9E93_RS04125;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079911.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 29492 30649 . - . ID=gene-C9E93_RS04130;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9E93_RS04130;old_locus_tag=C9E93_04285 NZ_PYJV01000028.1 Protein Homology CDS 29492 30649 . - 0 ID=cds-WP_023245007.1;Parent=gene-C9E93_RS04130;Dbxref=GenBank:WP_023245007.1;Name=WP_023245007.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9E93_RS04130;product=8-amino-7-oxononanoate synthase;protein_id=WP_023245007.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 30646 31686 . - . ID=gene-C9E93_RS04135;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9E93_RS04135;old_locus_tag=C9E93_04290 NZ_PYJV01000028.1 Protein Homology CDS 30646 31686 . - 0 ID=cds-WP_000090727.1;Parent=gene-C9E93_RS04135;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9E93_RS04135;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 31773 33062 . + . ID=gene-C9E93_RS04140;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9E93_RS04140;old_locus_tag=C9E93_04295 NZ_PYJV01000028.1 Protein Homology CDS 31773 33062 . + 0 ID=cds-WP_000205514.1;Parent=gene-C9E93_RS04140;Dbxref=GenBank:WP_000205514.1;Name=WP_000205514.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9E93_RS04140;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205514.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 33120 33596 . + . ID=gene-C9E93_RS04145;Name=C9E93_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04145;old_locus_tag=C9E93_04300 NZ_PYJV01000028.1 Protein Homology CDS 33120 33596 . + 0 ID=cds-WP_000767403.1;Parent=gene-C9E93_RS04145;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9E93_RS04145;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 33681 35201 . - . ID=gene-C9E93_RS04150;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9E93_RS04150;old_locus_tag=C9E93_04305 NZ_PYJV01000028.1 Protein Homology CDS 33681 35201 . - 0 ID=cds-WP_135370071.1;Parent=gene-C9E93_RS04150;Dbxref=GenBank:WP_135370071.1;Name=WP_135370071.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9E93_RS04150;product=histidine ammonia-lyase;protein_id=WP_135370071.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 35203 36888 . - . ID=gene-C9E93_RS04155;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9E93_RS04155;old_locus_tag=C9E93_04310 NZ_PYJV01000028.1 Protein Homology CDS 35203 36888 . - 0 ID=cds-WP_001115209.1;Parent=gene-C9E93_RS04155;Dbxref=GenBank:WP_001115209.1;Name=WP_001115209.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9E93_RS04155;product=urocanate hydratase;protein_id=WP_001115209.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 37085 37810 . - . ID=gene-C9E93_RS04160;Name=C9E93_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04160;old_locus_tag=C9E93_04315 NZ_PYJV01000028.1 Protein Homology CDS 37085 37810 . - 0 ID=cds-WP_000287413.1;Parent=gene-C9E93_RS04160;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9E93_RS04160;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 37855 38796 . - . ID=gene-C9E93_RS04165;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9E93_RS04165;old_locus_tag=C9E93_04320 NZ_PYJV01000028.1 Protein Homology CDS 37855 38796 . - 0 ID=cds-WP_001616913.1;Parent=gene-C9E93_RS04165;Dbxref=GenBank:WP_001616913.1;Name=WP_001616913.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9E93_RS04165;product=formimidoylglutamase;protein_id=WP_001616913.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 38793 40016 . - . ID=gene-C9E93_RS04170;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9E93_RS04170;old_locus_tag=C9E93_04325 NZ_PYJV01000028.1 Protein Homology CDS 38793 40016 . - 0 ID=cds-WP_135370073.1;Parent=gene-C9E93_RS04170;Dbxref=GenBank:WP_135370073.1;Name=WP_135370073.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9E93_RS04170;product=imidazolonepropionase;protein_id=WP_135370073.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 40254 41537 . + . ID=gene-C9E93_RS04175;Name=C9E93_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04175;old_locus_tag=C9E93_04330 NZ_PYJV01000028.1 Protein Homology CDS 40254 41537 . + 0 ID=cds-WP_001094766.1;Parent=gene-C9E93_RS04175;Dbxref=GenBank:WP_001094766.1;Name=WP_001094766.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9E93_RS04175;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094766.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 41681 42676 . - . ID=gene-C9E93_RS04180;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=C9E93_RS04180;old_locus_tag=C9E93_04335 NZ_PYJV01000028.1 Protein Homology CDS 41681 42676 . - 0 ID=cds-WP_135370072.1;Parent=gene-C9E93_RS04180;Dbxref=GenBank:WP_135370072.1;Name=WP_135370072.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9E93_RS04180;product=6-phosphogluconolactonase;protein_id=WP_135370072.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 42840 43658 . + . ID=gene-C9E93_RS04185;Name=C9E93_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04185;old_locus_tag=C9E93_04340 NZ_PYJV01000028.1 Protein Homology CDS 42840 43658 . + 0 ID=cds-WP_023196373.1;Parent=gene-C9E93_RS04185;Dbxref=GenBank:WP_023196373.1;Name=WP_023196373.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9E93_RS04185;product=pyridoxal phosphatase;protein_id=WP_023196373.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 43659 44717 . - . ID=gene-C9E93_RS04190;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9E93_RS04190;old_locus_tag=C9E93_04345 NZ_PYJV01000028.1 Protein Homology CDS 43659 44717 . - 0 ID=cds-WP_000891710.1;Parent=gene-C9E93_RS04190;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9E93_RS04190;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 44720 45409 . - . ID=gene-C9E93_RS04195;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9E93_RS04195;old_locus_tag=C9E93_04350 NZ_PYJV01000028.1 Protein Homology CDS 44720 45409 . - 0 ID=cds-WP_000604026.1;Parent=gene-C9E93_RS04195;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9E93_RS04195;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 45409 46182 . - . ID=gene-C9E93_RS04200;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9E93_RS04200;old_locus_tag=C9E93_04355 NZ_PYJV01000028.1 Protein Homology CDS 45409 46182 . - 0 ID=cds-WP_000951416.1;Parent=gene-C9E93_RS04200;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9E93_RS04200;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 46349 46498 . - . ID=gene-C9E93_RS04205;Name=C9E93_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04205;old_locus_tag=C9E93_04360 NZ_PYJV01000028.1 Protein Homology CDS 46349 46498 . - 0 ID=cds-WP_000891513.1;Parent=gene-C9E93_RS04205;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9E93_RS04205;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 46627 47415 . + . ID=gene-C9E93_RS04210;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9E93_RS04210;old_locus_tag=C9E93_04365 NZ_PYJV01000028.1 Protein Homology CDS 46627 47415 . + 0 ID=cds-WP_001147416.1;Parent=gene-C9E93_RS04210;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9E93_RS04210;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 47483 48958 . + . ID=gene-C9E93_RS04215;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9E93_RS04215;old_locus_tag=C9E93_04370 NZ_PYJV01000028.1 Protein Homology CDS 47483 48958 . + 0 ID=cds-WP_000096931.1;Parent=gene-C9E93_RS04215;Dbxref=GenBank:WP_000096931.1;Name=WP_000096931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9E93_RS04215;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096931.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 49129 50037 . + . ID=gene-C9E93_RS04220;Name=C9E93_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04220;old_locus_tag=C9E93_04375 NZ_PYJV01000028.1 Protein Homology CDS 49129 50037 . + 0 ID=cds-WP_000885513.1;Parent=gene-C9E93_RS04220;Dbxref=GenBank:WP_000885513.1;Name=WP_000885513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9E93_RS04220;product=DUF2167 domain-containing protein;protein_id=WP_000885513.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 50260 51276 . + . ID=gene-C9E93_RS04225;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9E93_RS04225;old_locus_tag=C9E93_04380 NZ_PYJV01000028.1 Protein Homology CDS 50260 51276 . + 0 ID=cds-WP_001265465.1;Parent=gene-C9E93_RS04225;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9E93_RS04225;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 51287 52333 . + . ID=gene-C9E93_RS04230;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9E93_RS04230;old_locus_tag=C9E93_04385 NZ_PYJV01000028.1 Protein Homology CDS 51287 52333 . + 0 ID=cds-WP_000187471.1;Parent=gene-C9E93_RS04230;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9E93_RS04230;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 52336 53484 . + . ID=gene-C9E93_RS04235;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9E93_RS04235;old_locus_tag=C9E93_04390 NZ_PYJV01000028.1 Protein Homology CDS 52336 53484 . + 0 ID=cds-WP_001049366.1;Parent=gene-C9E93_RS04235;Dbxref=GenBank:WP_001049366.1;Name=WP_001049366.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9E93_RS04235;product=galactokinase;protein_id=WP_001049366.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 53478 54518 . + . ID=gene-C9E93_RS04240;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9E93_RS04240;old_locus_tag=C9E93_04395 NZ_PYJV01000028.1 Protein Homology CDS 53478 54518 . + 0 ID=cds-WP_000931428.1;Parent=gene-C9E93_RS04240;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9E93_RS04240;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 54742 55494 . + . ID=gene-C9E93_RS04245;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9E93_RS04245;old_locus_tag=C9E93_04405 NZ_PYJV01000028.1 Protein Homology CDS 54742 55494 . + 0 ID=cds-WP_000301554.1;Parent=gene-C9E93_RS04245;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9E93_RS04245;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 55585 56361 . - . ID=gene-C9E93_RS04250;Name=C9E93_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04250;old_locus_tag=C9E93_04410 NZ_PYJV01000028.1 Protein Homology CDS 55585 56361 . - 0 ID=cds-WP_001214709.1;Parent=gene-C9E93_RS04250;Dbxref=GenBank:WP_001214709.1;Name=WP_001214709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9E93_RS04250;product=ABC transporter ATP-binding protein;protein_id=WP_001214709.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 56361 57440 . - . ID=gene-C9E93_RS04255;Name=C9E93_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04255;old_locus_tag=C9E93_04415 NZ_PYJV01000028.1 Protein Homology CDS 56361 57440 . - 0 ID=cds-WP_000128337.1;Parent=gene-C9E93_RS04255;Dbxref=GenBank:WP_000128337.1;Name=WP_000128337.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9E93_RS04255;product=FecCD family ABC transporter permease;protein_id=WP_000128337.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 57820 58518 . - . ID=gene-C9E93_RS04260;Name=C9E93_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04260;old_locus_tag=C9E93_04420 NZ_PYJV01000028.1 Protein Homology CDS 57820 58518 . - 0 ID=cds-WP_001005993.1;Parent=gene-C9E93_RS04260;Dbxref=GenBank:WP_001005993.1;Name=WP_001005993.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9E93_RS04260;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005993.1;transl_table=11 NZ_PYJV01000028.1 RefSeq gene 58637 59251 . - . ID=gene-C9E93_RS04265;Name=C9E93_RS04265;end_range=59251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04265;old_locus_tag=C9E93_04425;partial=true NZ_PYJV01000028.1 Protein Homology CDS 58637 59251 . - 0 ID=cds-WP_135400589.1;Parent=gene-C9E93_RS04265;Dbxref=GenBank:WP_135400589.1;Name=WP_135400589.1;Ontology_term=GO:0006814,GO:0016829;end_range=59251,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=C9E93_RS04265;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135400589.1;transl_table=11 ##sequence-region NZ_PYJV01000096.1 1 54601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000096.1 RefSeq region 1 54601 . + . ID=NZ_PYJV01000096.1:1..54601;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000096.1 RefSeq gene 424 1224 . + . ID=gene-C9E93_RS17430;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9E93_RS17430;old_locus_tag=C9E93_17895 NZ_PYJV01000096.1 Protein Homology CDS 424 1224 . + 0 ID=cds-WP_000210451.1;Parent=gene-C9E93_RS17430;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9E93_RS17430;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 1452 3089 . + . ID=gene-C9E93_RS17435;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9E93_RS17435;old_locus_tag=C9E93_17900 NZ_PYJV01000096.1 Protein Homology CDS 1452 3089 . + 0 ID=cds-WP_000210863.1;Parent=gene-C9E93_RS17435;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9E93_RS17435;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 3172 4470 . + . ID=gene-C9E93_RS17440;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9E93_RS17440;old_locus_tag=C9E93_17905 NZ_PYJV01000096.1 Protein Homology CDS 3172 4470 . + 0 ID=cds-WP_000036734.1;Parent=gene-C9E93_RS17440;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9E93_RS17440;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 4606 5277 . + . ID=gene-C9E93_RS17445;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9E93_RS17445;old_locus_tag=C9E93_17910 NZ_PYJV01000096.1 Protein Homology CDS 4606 5277 . + 0 ID=cds-WP_001199961.1;Parent=gene-C9E93_RS17445;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9E93_RS17445;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_PYJV01000096.1 RefSeq direct_repeat 5574 7063 . + . ID=id-NZ_PYJV01000096.1:5574..7063;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5574..5602;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_PYJV01000096.1 RefSeq gene 7222 8019 . + . ID=gene-C9E93_RS17450;Name=C9E93_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17450;old_locus_tag=C9E93_17915 NZ_PYJV01000096.1 Protein Homology CDS 7222 8019 . + 0 ID=cds-WP_135370031.1;Parent=gene-C9E93_RS17450;Dbxref=GenBank:WP_135370031.1;Name=WP_135370031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9E93_RS17450;product=MBL fold metallo-hydrolase;protein_id=WP_135370031.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 8107 8469 . - . ID=gene-C9E93_RS17455;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9E93_RS17455;old_locus_tag=C9E93_17920 NZ_PYJV01000096.1 Protein Homology CDS 8107 8469 . - 0 ID=cds-WP_000108313.1;Parent=gene-C9E93_RS17455;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9E93_RS17455;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 8893 10692 . + . ID=gene-C9E93_RS17465;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9E93_RS17465;old_locus_tag=C9E93_17930 NZ_PYJV01000096.1 Protein Homology CDS 8893 10692 . + 0 ID=cds-WP_023204597.1;Parent=gene-C9E93_RS17465;Dbxref=GenBank:WP_023204597.1;Name=WP_023204597.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9E93_RS17465;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_023204597.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 10692 12404 . + . ID=gene-C9E93_RS17470;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9E93_RS17470;old_locus_tag=C9E93_17935 NZ_PYJV01000096.1 Protein Homology CDS 10692 12404 . + 0 ID=cds-WP_135370030.1;Parent=gene-C9E93_RS17470;Dbxref=GenBank:WP_135370030.1;Name=WP_135370030.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9E93_RS17470;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_135370030.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 12480 13214 . + . ID=gene-C9E93_RS17480;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9E93_RS17480;old_locus_tag=C9E93_17945 NZ_PYJV01000096.1 Protein Homology CDS 12480 13214 . + 0 ID=cds-WP_135370029.1;Parent=gene-C9E93_RS17480;Dbxref=GenBank:WP_135370029.1;Name=WP_135370029.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9E93_RS17480;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_135370029.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 13302 14255 . - . ID=gene-C9E93_RS17485;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9E93_RS17485;old_locus_tag=C9E93_17950 NZ_PYJV01000096.1 Protein Homology CDS 13302 14255 . - 0 ID=cds-WP_135370028.1;Parent=gene-C9E93_RS17485;Dbxref=GenBank:WP_135370028.1;Name=WP_135370028.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=C9E93_RS17485;product=SPI-1 type III secretion system effector SopD;protein_id=WP_135370028.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 14699 17362 . + . ID=gene-C9E93_RS17495;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=C9E93_RS17495;old_locus_tag=C9E93_17960 NZ_PYJV01000096.1 Protein Homology CDS 14699 17362 . + 0 ID=cds-WP_135370539.1;Parent=gene-C9E93_RS17495;Dbxref=GenBank:WP_135370539.1;Name=WP_135370539.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=C9E93_RS17495;product=CRISPR-associated helicase Cas3';protein_id=WP_135370539.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 17374 18933 . + . ID=gene-C9E93_RS17500;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=C9E93_RS17500;old_locus_tag=C9E93_17965 NZ_PYJV01000096.1 Protein Homology CDS 17374 18933 . + 0 ID=cds-WP_000368586.1;Parent=gene-C9E93_RS17500;Dbxref=GenBank:WP_000368586.1;Name=WP_000368586.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9E93_RS17500;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000368586.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 18930 19478 . + . ID=gene-C9E93_RS17505;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=C9E93_RS17505;old_locus_tag=C9E93_17970 NZ_PYJV01000096.1 Protein Homology CDS 18930 19478 . + 0 ID=cds-WP_020839113.1;Parent=gene-C9E93_RS17505;Dbxref=GenBank:WP_020839113.1;Name=WP_020839113.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540805.1;locus_tag=C9E93_RS17505;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_020839113.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 19492 20550 . + . ID=gene-C9E93_RS17510;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9E93_RS17510;old_locus_tag=C9E93_17975 NZ_PYJV01000096.1 Protein Homology CDS 19492 20550 . + 0 ID=cds-WP_001591403.1;Parent=gene-C9E93_RS17510;Dbxref=GenBank:WP_001591403.1;Name=WP_001591403.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=C9E93_RS17510;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001591403.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 20561 21307 . + . ID=gene-C9E93_RS17515;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9E93_RS17515;old_locus_tag=C9E93_17980 NZ_PYJV01000096.1 Protein Homology CDS 20561 21307 . + 0 ID=cds-WP_023236955.1;Parent=gene-C9E93_RS17515;Dbxref=GenBank:WP_023236955.1;Name=WP_023236955.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=C9E93_RS17515;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_023236955.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 21289 21939 . + . ID=gene-C9E93_RS17520;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9E93_RS17520;old_locus_tag=C9E93_17985 NZ_PYJV01000096.1 Protein Homology CDS 21289 21939 . + 0 ID=cds-WP_135370540.1;Parent=gene-C9E93_RS17520;Dbxref=GenBank:WP_135370540.1;Name=WP_135370540.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=C9E93_RS17520;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_135370540.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 21936 22856 . + . ID=gene-C9E93_RS17525;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9E93_RS17525;old_locus_tag=C9E93_17990 NZ_PYJV01000096.1 Protein Homology CDS 21936 22856 . + 0 ID=cds-WP_061383858.1;Parent=gene-C9E93_RS17525;Dbxref=GenBank:WP_061383858.1;Name=WP_061383858.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=C9E93_RS17525;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_061383858.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 22856 23149 . + . ID=gene-C9E93_RS17530;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9E93_RS17530;old_locus_tag=C9E93_17995 NZ_PYJV01000096.1 Protein Homology CDS 22856 23149 . + 0 ID=cds-WP_023201007.1;Parent=gene-C9E93_RS17530;Dbxref=GenBank:WP_023201007.1;Name=WP_023201007.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=C9E93_RS17530;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_023201007.1;transl_table=11 NZ_PYJV01000096.1 RefSeq direct_repeat 23246 24982 . + . ID=id-NZ_PYJV01000096.1:23246..24982;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=23246..23274;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_PYJV01000096.1 RefSeq gene 24997 26043 . - . ID=gene-C9E93_RS17535;Name=C9E93_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17535;old_locus_tag=C9E93_18000 NZ_PYJV01000096.1 Protein Homology CDS 24997 26043 . - 0 ID=cds-WP_000490481.1;Parent=gene-C9E93_RS17535;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9E93_RS17535;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 26294 27202 . + . ID=gene-C9E93_RS17540;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9E93_RS17540;old_locus_tag=C9E93_18005 NZ_PYJV01000096.1 Protein Homology CDS 26294 27202 . + 0 ID=cds-WP_000372384.1;Parent=gene-C9E93_RS17540;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9E93_RS17540;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 27212 28651 . + . ID=gene-C9E93_RS17545;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9E93_RS17545;old_locus_tag=C9E93_18010 NZ_PYJV01000096.1 Protein Homology CDS 27212 28651 . + 0 ID=cds-WP_135370497.1;Parent=gene-C9E93_RS17545;Dbxref=GenBank:WP_135370497.1;Name=WP_135370497.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9E93_RS17545;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_135370497.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 28638 29243 . + . ID=gene-C9E93_RS17550;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9E93_RS17550;old_locus_tag=C9E93_18015 NZ_PYJV01000096.1 Protein Homology CDS 28638 29243 . + 0 ID=cds-WP_001173663.1;Parent=gene-C9E93_RS17550;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9E93_RS17550;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 29294 29617 . + . ID=gene-C9E93_RS17555;Name=C9E93_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17555;old_locus_tag=C9E93_18020 NZ_PYJV01000096.1 Protein Homology CDS 29294 29617 . + 0 ID=cds-WP_001537530.1;Parent=gene-C9E93_RS17555;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=C9E93_RS17555;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 29808 30119 . + . ID=gene-C9E93_RS17560;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9E93_RS17560;old_locus_tag=C9E93_18025 NZ_PYJV01000096.1 Protein Homology CDS 29808 30119 . + 0 ID=cds-WP_000517480.1;Parent=gene-C9E93_RS17560;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9E93_RS17560;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 30138 30848 . + . ID=gene-C9E93_RS17565;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9E93_RS17565;old_locus_tag=C9E93_18030 NZ_PYJV01000096.1 Protein Homology CDS 30138 30848 . + 0 ID=cds-WP_000741649.1;Parent=gene-C9E93_RS17565;Dbxref=GenBank:WP_000741649.1;Name=WP_000741649.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9E93_RS17565;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741649.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 30848 31327 . + . ID=gene-C9E93_RS17570;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9E93_RS17570;old_locus_tag=C9E93_18035 NZ_PYJV01000096.1 Protein Homology CDS 30848 31327 . + 0 ID=cds-WP_001219245.1;Parent=gene-C9E93_RS17570;Dbxref=GenBank:WP_001219245.1;Name=WP_001219245.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9E93_RS17570;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219245.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 31324 32373 . + . ID=gene-C9E93_RS17575;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9E93_RS17575;old_locus_tag=C9E93_18040 NZ_PYJV01000096.1 Protein Homology CDS 31324 32373 . + 0 ID=cds-WP_000134246.1;Parent=gene-C9E93_RS17575;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9E93_RS17575;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 32354 33115 . + . ID=gene-C9E93_RS17580;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9E93_RS17580;old_locus_tag=C9E93_18045 NZ_PYJV01000096.1 Protein Homology CDS 32354 33115 . + 0 ID=cds-WP_001221537.1;Parent=gene-C9E93_RS17580;Dbxref=GenBank:WP_001221537.1;Name=WP_001221537.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9E93_RS17580;product=5'/3'-nucleotidase SurE;protein_id=WP_001221537.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 33109 33735 . + . ID=gene-C9E93_RS17585;Name=C9E93_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17585;old_locus_tag=C9E93_18050 NZ_PYJV01000096.1 Protein Homology CDS 33109 33735 . + 0 ID=cds-WP_000253545.1;Parent=gene-C9E93_RS17585;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9E93_RS17585;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 33874 34032 . - . ID=gene-C9E93_RS23975;Name=C9E93_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23975 NZ_PYJV01000096.1 Protein Homology CDS 33874 34032 . - 0 ID=cds-WP_223148970.1;Parent=gene-C9E93_RS23975;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9E93_RS23975;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 33962 35044 . + . ID=gene-C9E93_RS17590;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9E93_RS17590;old_locus_tag=C9E93_18055 NZ_PYJV01000096.1 Protein Homology CDS 33962 35044 . + 0 ID=cds-WP_223149274.1;Parent=gene-C9E93_RS17590;Dbxref=GenBank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9E93_RS17590;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 35107 36099 . + . ID=gene-C9E93_RS17595;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9E93_RS17595;old_locus_tag=C9E93_18060 NZ_PYJV01000096.1 Protein Homology CDS 35107 36099 . + 0 ID=cds-WP_000081498.1;Parent=gene-C9E93_RS17595;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9E93_RS17595;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 36144 36380 . - . ID=gene-C9E93_RS17600;Name=C9E93_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17600;old_locus_tag=C9E93_18065 NZ_PYJV01000096.1 Protein Homology CDS 36144 36380 . - 0 ID=cds-WP_126523873.1;Parent=gene-C9E93_RS17600;Dbxref=GenBank:WP_126523873.1;Name=WP_126523873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9E93_RS17600;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_126523873.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 36391 37818 . - . ID=gene-C9E93_RS17605;Name=C9E93_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17605;old_locus_tag=C9E93_18070 NZ_PYJV01000096.1 Protein Homology CDS 36391 37818 . - 0 ID=cds-WP_000863168.1;Parent=gene-C9E93_RS17605;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9E93_RS17605;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 37818 38411 . - . ID=gene-C9E93_RS17610;Name=C9E93_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17610;old_locus_tag=C9E93_18075 NZ_PYJV01000096.1 Protein Homology CDS 37818 38411 . - 0 ID=cds-WP_001237180.1;Parent=gene-C9E93_RS17610;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9E93_RS17610;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 38582 38986 . + . ID=gene-C9E93_RS17615;Name=C9E93_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17615;old_locus_tag=C9E93_18080 NZ_PYJV01000096.1 Protein Homology CDS 38582 38986 . + 0 ID=cds-WP_000423338.1;Parent=gene-C9E93_RS17615;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9E93_RS17615;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 39005 39769 . - . ID=gene-C9E93_RS17620;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9E93_RS17620;old_locus_tag=C9E93_18085 NZ_PYJV01000096.1 Protein Homology CDS 39005 39769 . - 0 ID=cds-WP_000613178.1;Parent=gene-C9E93_RS17620;Dbxref=GenBank:WP_000613178.1;Name=WP_000613178.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9E93_RS17620;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613178.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 39966 40889 . + . ID=gene-C9E93_RS17625;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=C9E93_RS17625;old_locus_tag=C9E93_18090 NZ_PYJV01000096.1 Protein Homology CDS 39966 40889 . + 0 ID=cds-WP_135370496.1;Parent=gene-C9E93_RS17625;Dbxref=GenBank:WP_135370496.1;Name=WP_135370496.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9E93_RS17625;product=L-threonate dehydrogenase;protein_id=WP_135370496.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 40883 42145 . + . ID=gene-C9E93_RS17630;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=C9E93_RS17630;old_locus_tag=C9E93_18095 NZ_PYJV01000096.1 Protein Homology CDS 40883 42145 . + 0 ID=cds-WP_001534269.1;Parent=gene-C9E93_RS17630;Dbxref=GenBank:WP_001534269.1;Name=WP_001534269.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9E93_RS17630;product=3-oxo-tetronate kinase;protein_id=WP_001534269.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 42142 42780 . + . ID=gene-C9E93_RS17635;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=C9E93_RS17635;old_locus_tag=C9E93_18100 NZ_PYJV01000096.1 Protein Homology CDS 42142 42780 . + 0 ID=cds-WP_000153636.1;Parent=gene-C9E93_RS17635;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9E93_RS17635;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_000153636.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 42785 43561 . + . ID=gene-C9E93_RS17640;Name=C9E93_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17640;old_locus_tag=C9E93_18105 NZ_PYJV01000096.1 Protein Homology CDS 42785 43561 . + 0 ID=cds-WP_001136942.1;Parent=gene-C9E93_RS17640;Dbxref=GenBank:WP_001136942.1;Name=WP_001136942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9E93_RS17640;product=HPr family phosphocarrier protein;protein_id=WP_001136942.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 43601 44551 . + . ID=gene-C9E93_RS17645;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=C9E93_RS17645;old_locus_tag=C9E93_18110 NZ_PYJV01000096.1 Protein Homology CDS 43601 44551 . + 0 ID=cds-WP_135370495.1;Parent=gene-C9E93_RS17645;Dbxref=GenBank:WP_135370495.1;Name=WP_135370495.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9E93_RS17645;product=D-erythronate dehydrogenase;protein_id=WP_135370495.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 44548 46044 . + . ID=gene-C9E93_RS17650;Name=C9E93_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17650;old_locus_tag=C9E93_18115 NZ_PYJV01000096.1 Protein Homology CDS 44548 46044 . + 0 ID=cds-WP_000202725.1;Parent=gene-C9E93_RS17650;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9E93_RS17650;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 46086 47018 . - . ID=gene-C9E93_RS17655;Name=C9E93_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17655;old_locus_tag=C9E93_18120 NZ_PYJV01000096.1 Protein Homology CDS 46086 47018 . - 0 ID=cds-WP_000216305.1;Parent=gene-C9E93_RS17655;Dbxref=GenBank:WP_000216305.1;Name=WP_000216305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=C9E93_RS17655;product=LysR family transcriptional regulator;protein_id=WP_000216305.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 47106 48314 . + . ID=gene-C9E93_RS17660;Name=C9E93_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17660;old_locus_tag=C9E93_18125 NZ_PYJV01000096.1 Protein Homology CDS 47106 48314 . + 0 ID=cds-WP_135370494.1;Parent=gene-C9E93_RS17660;Dbxref=GenBank:WP_135370494.1;Name=WP_135370494.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=C9E93_RS17660;product=MFS transporter;protein_id=WP_135370494.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 48311 48691 . + . ID=gene-C9E93_RS17665;Name=C9E93_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17665;old_locus_tag=C9E93_18130 NZ_PYJV01000096.1 Protein Homology CDS 48311 48691 . + 0 ID=cds-WP_001070459.1;Parent=gene-C9E93_RS17665;Dbxref=GenBank:WP_001070459.1;Name=WP_001070459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9E93_RS17665;product=DUF4440 domain-containing protein;protein_id=WP_001070459.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 48747 51314 . - . ID=gene-C9E93_RS17670;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9E93_RS17670;old_locus_tag=C9E93_18135 NZ_PYJV01000096.1 Protein Homology CDS 48747 51314 . - 0 ID=cds-WP_001005807.1;Parent=gene-C9E93_RS17670;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9E93_RS17670;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11 NZ_PYJV01000096.1 RefSeq pseudogene 51473 51871 . + . ID=gene-C9E93_RS17675;Name=C9E93_RS17675;end_range=51871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS17675;old_locus_tag=C9E93_18140;partial=true;pseudo=true NZ_PYJV01000096.1 Protein Homology CDS 51473 51871 . + 0 ID=cds-C9E93_RS17675;Parent=gene-C9E93_RS17675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=51871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9E93_RS17675;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_PYJV01000096.1 RefSeq pseudogene 52071 52301 . + . ID=gene-C9E93_RS17680;Name=C9E93_RS17680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS17680;old_locus_tag=C9E93_18145;partial=true;pseudo=true;start_range=.,52071 NZ_PYJV01000096.1 Protein Homology CDS 52071 52301 . + 0 ID=cds-C9E93_RS17680;Parent=gene-C9E93_RS17680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=C9E93_RS17680;partial=true;product=hypothetical protein;pseudo=true;start_range=.,52071;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 52458 53126 . + . ID=gene-C9E93_RS17685;Name=C9E93_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17685;old_locus_tag=C9E93_18150 NZ_PYJV01000096.1 Protein Homology CDS 52458 53126 . + 0 ID=cds-WP_135370492.1;Parent=gene-C9E93_RS17685;Dbxref=GenBank:WP_135370492.1;Name=WP_135370492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=C9E93_RS17685;product=hypothetical protein;protein_id=WP_135370492.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 53153 53647 . + . ID=gene-C9E93_RS17690;Name=C9E93_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17690;old_locus_tag=C9E93_18155 NZ_PYJV01000096.1 Protein Homology CDS 53153 53647 . + 0 ID=cds-WP_000424944.1;Parent=gene-C9E93_RS17690;Dbxref=GenBank:WP_000424944.1;Name=WP_000424944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=C9E93_RS17690;product=hypothetical protein;protein_id=WP_000424944.1;transl_table=11 NZ_PYJV01000096.1 RefSeq gene 53892 54548 . - . ID=gene-C9E93_RS17695;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9E93_RS17695;old_locus_tag=C9E93_18160 NZ_PYJV01000096.1 Protein Homology CDS 53892 54548 . - 0 ID=cds-WP_000420451.1;Parent=gene-C9E93_RS17695;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9E93_RS17695;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11 ##sequence-region NZ_PYJV01000115.1 1 53539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000115.1 RefSeq region 1 53539 . + . ID=NZ_PYJV01000115.1:1..53539;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000115.1 RefSeq gene 558 1190 . + . ID=gene-C9E93_RS20840;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9E93_RS20840;old_locus_tag=C9E93_21385 NZ_PYJV01000115.1 Protein Homology CDS 558 1190 . + 0 ID=cds-WP_135370288.1;Parent=gene-C9E93_RS20840;Dbxref=GenBank:WP_135370288.1;Name=WP_135370288.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9E93_RS20840;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_135370288.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 1236 1754 . - . ID=gene-C9E93_RS20845;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9E93_RS20845;old_locus_tag=C9E93_21390 NZ_PYJV01000115.1 Protein Homology CDS 1236 1754 . - 0 ID=cds-WP_000577507.1;Parent=gene-C9E93_RS20845;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9E93_RS20845;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 1764 2771 . - . ID=gene-C9E93_RS20850;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9E93_RS20850;old_locus_tag=C9E93_21395 NZ_PYJV01000115.1 Protein Homology CDS 1764 2771 . - 0 ID=cds-WP_000708662.1;Parent=gene-C9E93_RS20850;Dbxref=GenBank:WP_000708662.1;Name=WP_000708662.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9E93_RS20850;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708662.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 2786 5398 . - . ID=gene-C9E93_RS20855;Name=C9E93_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20855;old_locus_tag=C9E93_21400 NZ_PYJV01000115.1 Protein Homology CDS 2786 5398 . - 0 ID=cds-WP_135370287.1;Parent=gene-C9E93_RS20855;Dbxref=GenBank:WP_135370287.1;Name=WP_135370287.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9E93_RS20855;product=fimbrial biogenesis usher protein;protein_id=WP_135370287.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 5429 6121 . - . ID=gene-C9E93_RS20860;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9E93_RS20860;old_locus_tag=C9E93_21405 NZ_PYJV01000115.1 Protein Homology CDS 5429 6121 . - 0 ID=cds-WP_135400641.1;Parent=gene-C9E93_RS20860;Dbxref=GenBank:WP_135400641.1;Name=WP_135400641.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9E93_RS20860;product=type 1 fimbria chaperone FimC;protein_id=WP_135400641.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 6165 6698 . - . ID=gene-C9E93_RS20865;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9E93_RS20865;old_locus_tag=C9E93_21410 NZ_PYJV01000115.1 Protein Homology CDS 6165 6698 . - 0 ID=cds-WP_135370531.1;Parent=gene-C9E93_RS20865;Dbxref=GenBank:WP_135370531.1;Name=WP_135370531.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9E93_RS20865;product=type 1 fimbrial protein subunit FimI;protein_id=WP_135370531.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 6773 7330 . - . ID=gene-C9E93_RS20870;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9E93_RS20870;old_locus_tag=C9E93_21415 NZ_PYJV01000115.1 Protein Homology CDS 6773 7330 . - 0 ID=cds-WP_135370532.1;Parent=gene-C9E93_RS20870;Dbxref=GenBank:WP_135370532.1;Name=WP_135370532.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9E93_RS20870;product=type 1 fimbrial protein subunit FimA;protein_id=WP_135370532.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 7877 8743 . + . ID=gene-C9E93_RS20880;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9E93_RS20880;old_locus_tag=C9E93_21425 NZ_PYJV01000115.1 Protein Homology CDS 7877 8743 . + 0 ID=cds-WP_000729165.1;Parent=gene-C9E93_RS20880;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9E93_RS20880;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 8745 8957 . + . ID=gene-C9E93_RS20885;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9E93_RS20885;old_locus_tag=C9E93_21430 NZ_PYJV01000115.1 Protein Homology CDS 8745 8957 . + 0 ID=cds-WP_000190280.1;Parent=gene-C9E93_RS20885;Dbxref=GenBank:WP_000190280.1;Name=WP_000190280.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9E93_RS20885;product=ribosome-associated protein YbcJ;protein_id=WP_000190280.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 9084 9629 . + . ID=gene-C9E93_RS20890;Name=C9E93_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20890;old_locus_tag=C9E93_21435 NZ_PYJV01000115.1 Protein Homology CDS 9084 9629 . + 0 ID=cds-WP_001143571.1;Parent=gene-C9E93_RS20890;Dbxref=GenBank:WP_001143571.1;Name=WP_001143571.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=C9E93_RS20890;product=metal-dependent hydrolase;protein_id=WP_001143571.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 9622 10059 . + . ID=gene-C9E93_RS20895;Name=C9E93_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20895;old_locus_tag=C9E93_21440 NZ_PYJV01000115.1 Protein Homology CDS 9622 10059 . + 0 ID=cds-WP_001038573.1;Parent=gene-C9E93_RS20895;Dbxref=GenBank:WP_001038573.1;Name=WP_001038573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=C9E93_RS20895;product=STM0539 family protein;protein_id=WP_001038573.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 10056 10880 . + . ID=gene-C9E93_RS20900;Name=C9E93_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20900;old_locus_tag=C9E93_21445 NZ_PYJV01000115.1 Protein Homology CDS 10056 10880 . + 0 ID=cds-WP_000819123.1;Parent=gene-C9E93_RS20900;Dbxref=GenBank:WP_000819123.1;Name=WP_000819123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=C9E93_RS20900;product=DUF2145 domain-containing protein;protein_id=WP_000819123.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 10924 12309 . - . ID=gene-C9E93_RS20905;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9E93_RS20905;old_locus_tag=C9E93_21450 NZ_PYJV01000115.1 Protein Homology CDS 10924 12309 . - 0 ID=cds-WP_000912376.1;Parent=gene-C9E93_RS20905;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9E93_RS20905;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 12482 12976 . + . ID=gene-C9E93_RS20910;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9E93_RS20910;old_locus_tag=C9E93_21455 NZ_PYJV01000115.1 Protein Homology CDS 12482 12976 . + 0 ID=cds-WP_000255991.1;Parent=gene-C9E93_RS20910;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9E93_RS20910;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 12979 13701 . + . ID=gene-C9E93_RS20915;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9E93_RS20915;old_locus_tag=C9E93_21460 NZ_PYJV01000115.1 Protein Homology CDS 12979 13701 . + 0 ID=cds-WP_039589637.1;Parent=gene-C9E93_RS20915;Dbxref=GenBank:WP_039589637.1;Name=WP_039589637.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9E93_RS20915;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_039589637.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 13819 14328 . + . ID=gene-C9E93_RS20920;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9E93_RS20920;old_locus_tag=C9E93_21470 NZ_PYJV01000115.1 Protein Homology CDS 13819 14328 . + 0 ID=cds-WP_000098736.1;Parent=gene-C9E93_RS20920;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9E93_RS20920;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 14325 15392 . + . ID=gene-C9E93_RS20925;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9E93_RS20925;old_locus_tag=C9E93_21475 NZ_PYJV01000115.1 Protein Homology CDS 14325 15392 . + 0 ID=cds-WP_000815603.1;Parent=gene-C9E93_RS20925;Dbxref=GenBank:WP_000815603.1;Name=WP_000815603.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9E93_RS20925;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815603.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 15433 16326 . - . ID=gene-C9E93_RS20930;Name=C9E93_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20930;old_locus_tag=C9E93_21480 NZ_PYJV01000115.1 Protein Homology CDS 15433 16326 . - 0 ID=cds-WP_000855344.1;Parent=gene-C9E93_RS20930;Dbxref=GenBank:WP_000855344.1;Name=WP_000855344.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9E93_RS20930;product=carbamate kinase;protein_id=WP_000855344.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 16330 17139 . - . ID=gene-C9E93_RS20935;Name=C9E93_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20935;old_locus_tag=C9E93_21485 NZ_PYJV01000115.1 Protein Homology CDS 16330 17139 . - 0 ID=cds-WP_000821191.1;Parent=gene-C9E93_RS20935;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9E93_RS20935;product=DUF2877 domain-containing protein;protein_id=WP_000821191.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 17151 18410 . - . ID=gene-C9E93_RS20940;Name=C9E93_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20940;old_locus_tag=C9E93_21490 NZ_PYJV01000115.1 Protein Homology CDS 17151 18410 . - 0 ID=cds-WP_061379746.1;Parent=gene-C9E93_RS20940;Dbxref=GenBank:WP_061379746.1;Name=WP_061379746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9E93_RS20940;product=DUF1116 domain-containing protein;protein_id=WP_061379746.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 18420 20084 . - . ID=gene-C9E93_RS20945;Name=C9E93_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20945;old_locus_tag=C9E93_21495 NZ_PYJV01000115.1 Protein Homology CDS 18420 20084 . - 0 ID=cds-WP_000580909.1;Parent=gene-C9E93_RS20945;Dbxref=GenBank:WP_000580909.1;Name=WP_000580909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9E93_RS20945;product=acyl-CoA synthetase FdrA;protein_id=WP_000580909.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 20400 21449 . + . ID=gene-C9E93_RS20950;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=C9E93_RS20950;old_locus_tag=C9E93_21500 NZ_PYJV01000115.1 Protein Homology CDS 20400 21449 . + 0 ID=cds-WP_135369993.1;Parent=gene-C9E93_RS20950;Dbxref=GenBank:WP_135369993.1;Name=WP_135369993.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=C9E93_RS20950;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_135369993.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 21471 22706 . + . ID=gene-C9E93_RS20955;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=C9E93_RS20955;old_locus_tag=C9E93_21505 NZ_PYJV01000115.1 Protein Homology CDS 21471 22706 . + 0 ID=cds-WP_000589769.1;Parent=gene-C9E93_RS20955;Dbxref=GenBank:WP_000589769.1;Name=WP_000589769.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9E93_RS20955;product=allantoate deiminase;protein_id=WP_000589769.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 22717 23502 . + . ID=gene-C9E93_RS20960;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=C9E93_RS20960;old_locus_tag=C9E93_21510 NZ_PYJV01000115.1 Protein Homology CDS 22717 23502 . + 0 ID=cds-WP_000540985.1;Parent=gene-C9E93_RS20960;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=C9E93_RS20960;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 23582 24730 . - . ID=gene-C9E93_RS20965;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=C9E93_RS20965;old_locus_tag=C9E93_21515 NZ_PYJV01000115.1 Protein Homology CDS 23582 24730 . - 0 ID=cds-WP_135369994.1;Parent=gene-C9E93_RS20965;Dbxref=GenBank:WP_135369994.1;Name=WP_135369994.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706330.1;locus_tag=C9E93_RS20965;product=glycerate 3-kinase;protein_id=WP_135369994.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 24753 26051 . - . ID=gene-C9E93_RS20970;Name=C9E93_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20970;old_locus_tag=C9E93_21520 NZ_PYJV01000115.1 Protein Homology CDS 24753 26051 . - 0 ID=cds-WP_000484505.1;Parent=gene-C9E93_RS20970;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9E93_RS20970;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 26110 27471 . - . ID=gene-C9E93_RS20975;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=C9E93_RS20975;old_locus_tag=C9E93_21525 NZ_PYJV01000115.1 Protein Homology CDS 26110 27471 . - 0 ID=cds-WP_000006865.1;Parent=gene-C9E93_RS20975;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=C9E93_RS20975;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 27550 29004 . - . ID=gene-C9E93_RS20980;Name=C9E93_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20980;old_locus_tag=C9E93_21530 NZ_PYJV01000115.1 Protein Homology CDS 27550 29004 . - 0 ID=cds-WP_000401063.1;Parent=gene-C9E93_RS20980;Dbxref=GenBank:WP_000401063.1;Name=WP_000401063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9E93_RS20980;product=allantoin transporter;protein_id=WP_000401063.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 29100 30347 . - . ID=gene-C9E93_RS20985;Name=C9E93_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20985;old_locus_tag=C9E93_21535 NZ_PYJV01000115.1 Protein Homology CDS 29100 30347 . - 0 ID=cds-WP_000005070.1;Parent=gene-C9E93_RS20985;Dbxref=GenBank:WP_000005070.1;Name=WP_000005070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=C9E93_RS20985;product=MFS transporter;protein_id=WP_000005070.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 30413 31291 . - . ID=gene-C9E93_RS20990;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=C9E93_RS20990;old_locus_tag=C9E93_21540 NZ_PYJV01000115.1 Protein Homology CDS 30413 31291 . - 0 ID=cds-WP_000765815.1;Parent=gene-C9E93_RS20990;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9E93_RS20990;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 31392 32168 . - . ID=gene-C9E93_RS20995;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=C9E93_RS20995;old_locus_tag=C9E93_21545 NZ_PYJV01000115.1 Protein Homology CDS 31392 32168 . - 0 ID=cds-WP_000943591.1;Parent=gene-C9E93_RS20995;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9E93_RS20995;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 32181 33962 . - . ID=gene-C9E93_RS21000;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9E93_RS21000;old_locus_tag=C9E93_21550 NZ_PYJV01000115.1 Protein Homology CDS 32181 33962 . - 0 ID=cds-WP_001096865.1;Parent=gene-C9E93_RS21000;Dbxref=GenBank:WP_001096865.1;Name=WP_001096865.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9E93_RS21000;product=glyoxylate carboligase;protein_id=WP_001096865.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 34047 34865 . - . ID=gene-C9E93_RS21005;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=C9E93_RS21005;old_locus_tag=C9E93_21555 NZ_PYJV01000115.1 Protein Homology CDS 34047 34865 . - 0 ID=cds-WP_000141265.1;Parent=gene-C9E93_RS21005;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9E93_RS21005;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 34944 35426 . - . ID=gene-C9E93_RS21010;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=C9E93_RS21010;old_locus_tag=C9E93_21560 NZ_PYJV01000115.1 Protein Homology CDS 34944 35426 . - 0 ID=cds-WP_000764659.1;Parent=gene-C9E93_RS21010;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9E93_RS21010;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 35653 36579 . + . ID=gene-C9E93_RS21015;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=C9E93_RS21015;old_locus_tag=C9E93_21565 NZ_PYJV01000115.1 Protein Homology CDS 35653 36579 . + 0 ID=cds-WP_000460169.1;Parent=gene-C9E93_RS21015;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9E93_RS21015;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 36649 37743 . + . ID=gene-C9E93_RS21020;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=C9E93_RS21020;old_locus_tag=C9E93_21570 NZ_PYJV01000115.1 Protein Homology CDS 36649 37743 . + 0 ID=cds-WP_061372184.1;Parent=gene-C9E93_RS21020;Dbxref=GenBank:WP_061372184.1;Name=WP_061372184.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9E93_RS21020;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_061372184.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 37772 38431 . - . ID=gene-C9E93_RS21025;Name=C9E93_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21025;old_locus_tag=C9E93_21575 NZ_PYJV01000115.1 Protein Homology CDS 37772 38431 . - 0 ID=cds-WP_000342247.1;Parent=gene-C9E93_RS21025;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9E93_RS21025;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 38424 39440 . - . ID=gene-C9E93_RS21030;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9E93_RS21030;old_locus_tag=C9E93_21580 NZ_PYJV01000115.1 Protein Homology CDS 38424 39440 . - 0 ID=cds-WP_000569660.1;Parent=gene-C9E93_RS21030;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9E93_RS21030;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 39477 40307 . - . ID=gene-C9E93_RS21035;Name=C9E93_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21035;old_locus_tag=C9E93_21585 NZ_PYJV01000115.1 Protein Homology CDS 39477 40307 . - 0 ID=cds-WP_135369951.1;Parent=gene-C9E93_RS21035;Dbxref=GenBank:WP_135369951.1;Name=WP_135369951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9E93_RS21035;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_135369951.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 40564 41697 . - . ID=gene-C9E93_RS21040;Name=C9E93_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21040;old_locus_tag=C9E93_21590 NZ_PYJV01000115.1 Protein Homology CDS 40564 41697 . - 0 ID=cds-WP_000152862.1;Parent=gene-C9E93_RS21040;Dbxref=GenBank:WP_000152862.1;Name=WP_000152862.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9E93_RS21040;product=porin;protein_id=WP_000152862.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 41884 44298 . - . ID=gene-C9E93_RS21045;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=C9E93_RS21045;old_locus_tag=C9E93_21595 NZ_PYJV01000115.1 Protein Homology CDS 41884 44298 . - 0 ID=cds-WP_135369952.1;Parent=gene-C9E93_RS21045;Dbxref=GenBank:WP_135369952.1;Name=WP_135369952.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9E93_RS21045;product=putative ABC transporter permease subunit YbbP;protein_id=WP_135369952.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 44295 44981 . - . ID=gene-C9E93_RS21050;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=C9E93_RS21050;old_locus_tag=C9E93_21600 NZ_PYJV01000115.1 Protein Homology CDS 44295 44981 . - 0 ID=cds-WP_001110598.1;Parent=gene-C9E93_RS21050;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9E93_RS21050;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 44952 45566 . + . ID=gene-C9E93_RS21055;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9E93_RS21055;old_locus_tag=C9E93_21605 NZ_PYJV01000115.1 Protein Homology CDS 44952 45566 . + 0 ID=cds-WP_001010574.1;Parent=gene-C9E93_RS21055;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9E93_RS21055;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 45721 46491 . + . ID=gene-C9E93_RS21060;Name=C9E93_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21060;old_locus_tag=C9E93_21610 NZ_PYJV01000115.1 Protein Homology CDS 45721 46491 . + 0 ID=cds-WP_001172802.1;Parent=gene-C9E93_RS21060;Dbxref=GenBank:WP_001172802.1;Name=WP_001172802.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9E93_RS21060;product=SDR family oxidoreductase;protein_id=WP_001172802.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 46551 47405 . + . ID=gene-C9E93_RS21065;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9E93_RS21065;old_locus_tag=C9E93_21615 NZ_PYJV01000115.1 Protein Homology CDS 46551 47405 . + 0 ID=cds-WP_000116060.1;Parent=gene-C9E93_RS21065;Dbxref=GenBank:WP_000116060.1;Name=WP_000116060.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9E93_RS21065;product=chaperedoxin;protein_id=WP_000116060.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 47491 48270 . - . ID=gene-C9E93_RS21070;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9E93_RS21070;old_locus_tag=C9E93_21620 NZ_PYJV01000115.1 Protein Homology CDS 47491 48270 . - 0 ID=cds-WP_001002130.1;Parent=gene-C9E93_RS21070;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9E93_RS21070;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 48257 48934 . - . ID=gene-C9E93_RS21075;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=C9E93_RS21075;old_locus_tag=C9E93_21625 NZ_PYJV01000115.1 Protein Homology CDS 48257 48934 . - 0 ID=cds-WP_000140188.1;Parent=gene-C9E93_RS21075;Dbxref=GenBank:WP_000140188.1;Name=WP_000140188.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9E93_RS21075;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140188.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 49081 49998 . + . ID=gene-C9E93_RS21080;Name=C9E93_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21080;old_locus_tag=C9E93_21630 NZ_PYJV01000115.1 Protein Homology CDS 49081 49998 . + 0 ID=cds-WP_000906146.1;Parent=gene-C9E93_RS21080;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9E93_RS21080;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 49995 50447 . + . ID=gene-C9E93_RS21085;Name=C9E93_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21085;old_locus_tag=C9E93_21635 NZ_PYJV01000115.1 Protein Homology CDS 49995 50447 . + 0 ID=cds-WP_000561177.1;Parent=gene-C9E93_RS21085;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9E93_RS21085;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 50448 50864 . - . ID=gene-C9E93_RS21090;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9E93_RS21090;old_locus_tag=C9E93_21640 NZ_PYJV01000115.1 Protein Homology CDS 50448 50864 . - 0 ID=cds-WP_001026760.1;Parent=gene-C9E93_RS21090;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9E93_RS21090;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_PYJV01000115.1 RefSeq gene 50974 53475 . + . ID=gene-C9E93_RS21095;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9E93_RS21095;old_locus_tag=C9E93_21645 NZ_PYJV01000115.1 Protein Homology CDS 50974 53475 . + 0 ID=cds-WP_000083909.1;Parent=gene-C9E93_RS21095;Dbxref=GenBank:WP_000083909.1;Name=WP_000083909.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9E93_RS21095;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083909.1;transl_table=11 ##sequence-region NZ_PYJV01000098.1 1 50696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000098.1 RefSeq region 1 50696 . + . ID=NZ_PYJV01000098.1:1..50696;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000098.1 RefSeq gene 204 794 . + . ID=gene-C9E93_RS17720;Name=C9E93_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17720;old_locus_tag=C9E93_18185 NZ_PYJV01000098.1 Protein Homology CDS 204 794 . + 0 ID=cds-WP_135370637.1;Parent=gene-C9E93_RS17720;Dbxref=GenBank:WP_135370637.1;Name=WP_135370637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=C9E93_RS17720;product=fimbrial protein;protein_id=WP_135370637.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 914 3403 . + . ID=gene-C9E93_RS17725;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9E93_RS17725;old_locus_tag=C9E93_18190 NZ_PYJV01000098.1 Protein Homology CDS 914 3403 . + 0 ID=cds-WP_135370636.1;Parent=gene-C9E93_RS17725;Dbxref=GenBank:WP_135370636.1;Name=WP_135370636.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9E93_RS17725;product=fimbrial outer membrane usher protein StdB;protein_id=WP_135370636.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 3444 4187 . + . ID=gene-C9E93_RS17730;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9E93_RS17730;old_locus_tag=C9E93_18195 NZ_PYJV01000098.1 Protein Homology CDS 3444 4187 . + 0 ID=cds-WP_080159976.1;Parent=gene-C9E93_RS17730;Dbxref=GenBank:WP_080159976.1;Name=WP_080159976.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9E93_RS17730;product=fimbrial biogenesis chaperone StdC;protein_id=WP_080159976.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 4184 5257 . + . ID=gene-C9E93_RS17735;Name=C9E93_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17735;old_locus_tag=C9E93_18200 NZ_PYJV01000098.1 Protein Homology CDS 4184 5257 . + 0 ID=cds-WP_047606484.1;Parent=gene-C9E93_RS17735;Dbxref=GenBank:WP_047606484.1;Name=WP_047606484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9E93_RS17735;product=membrane protein;protein_id=WP_047606484.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 5401 5913 . + . ID=gene-C9E93_RS17740;Name=C9E93_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17740;old_locus_tag=C9E93_18205 NZ_PYJV01000098.1 Protein Homology CDS 5401 5913 . + 0 ID=cds-WP_080232011.1;Parent=gene-C9E93_RS17740;Dbxref=GenBank:WP_080232011.1;Name=WP_080232011.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=C9E93_RS17740;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_080232011.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 5900 6658 . + . ID=gene-C9E93_RS17745;Name=C9E93_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17745;old_locus_tag=C9E93_18210 NZ_PYJV01000098.1 Protein Homology CDS 5900 6658 . + 0 ID=cds-WP_023232680.1;Parent=gene-C9E93_RS17745;Dbxref=GenBank:WP_023232680.1;Name=WP_023232680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9E93_RS17745;product=hypothetical protein;protein_id=WP_023232680.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 6863 7711 . - . ID=gene-C9E93_RS17750;Name=C9E93_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17750;old_locus_tag=C9E93_18215 NZ_PYJV01000098.1 Protein Homology CDS 6863 7711 . - 0 ID=cds-WP_000503687.1;Parent=gene-C9E93_RS17750;Dbxref=GenBank:WP_000503687.1;Name=WP_000503687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9E93_RS17750;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000503687.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 7834 8106 . + . ID=gene-C9E93_RS17755;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9E93_RS17755;old_locus_tag=C9E93_18220 NZ_PYJV01000098.1 Protein Homology CDS 7834 8106 . + 0 ID=cds-WP_000019953.1;Parent=gene-C9E93_RS17755;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9E93_RS17755;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 8137 9366 . - . ID=gene-C9E93_RS17760;Name=C9E93_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17760;old_locus_tag=C9E93_18225 NZ_PYJV01000098.1 Protein Homology CDS 8137 9366 . - 0 ID=cds-WP_000036824.1;Parent=gene-C9E93_RS17760;Dbxref=GenBank:WP_000036824.1;Name=WP_000036824.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9E93_RS17760;product=amino acid permease;protein_id=WP_000036824.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 9508 9963 . - . ID=gene-C9E93_RS17765;Name=C9E93_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17765;old_locus_tag=C9E93_18230 NZ_PYJV01000098.1 Protein Homology CDS 9508 9963 . - 0 ID=cds-WP_017465480.1;Parent=gene-C9E93_RS17765;Dbxref=GenBank:WP_017465480.1;Name=WP_017465480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9E93_RS17765;product=multidrug/biocide efflux PACE transporter;protein_id=WP_017465480.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 10067 10930 . + . ID=gene-C9E93_RS17770;Name=C9E93_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17770;old_locus_tag=C9E93_18235 NZ_PYJV01000098.1 Protein Homology CDS 10067 10930 . + 0 ID=cds-WP_017465481.1;Parent=gene-C9E93_RS17770;Dbxref=GenBank:WP_017465481.1;Name=WP_017465481.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9E93_RS17770;product=LysR family transcriptional regulator;protein_id=WP_017465481.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 11053 12231 . + . ID=gene-C9E93_RS17775;Name=C9E93_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17775;old_locus_tag=C9E93_18240 NZ_PYJV01000098.1 Protein Homology CDS 11053 12231 . + 0 ID=cds-WP_000665977.1;Parent=gene-C9E93_RS17775;Dbxref=GenBank:WP_000665977.1;Name=WP_000665977.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9E93_RS17775;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665977.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 12660 13496 . + . ID=gene-C9E93_RS17785;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=C9E93_RS17785;old_locus_tag=C9E93_18250 NZ_PYJV01000098.1 Protein Homology CDS 12660 13496 . + 0 ID=cds-WP_000383270.1;Parent=gene-C9E93_RS17785;Dbxref=GenBank:WP_000383270.1;Name=WP_000383270.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9E93_RS17785;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383270.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 13553 14314 . + . ID=gene-C9E93_RS17790;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9E93_RS17790;old_locus_tag=C9E93_18255 NZ_PYJV01000098.1 Protein Homology CDS 13553 14314 . + 0 ID=cds-WP_000602490.1;Parent=gene-C9E93_RS17790;Dbxref=GenBank:WP_000602490.1;Name=WP_000602490.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9E93_RS17790;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602490.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 14668 16086 . + . ID=gene-C9E93_RS17795;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9E93_RS17795;old_locus_tag=C9E93_18260 NZ_PYJV01000098.1 Protein Homology CDS 14668 16086 . + 0 ID=cds-WP_000253650.1;Parent=gene-C9E93_RS17795;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9E93_RS17795;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 16199 16906 . + . ID=gene-C9E93_RS17800;Name=C9E93_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17800;old_locus_tag=C9E93_18265 NZ_PYJV01000098.1 Protein Homology CDS 16199 16906 . + 0 ID=cds-WP_135370635.1;Parent=gene-C9E93_RS17800;Dbxref=GenBank:WP_135370635.1;Name=WP_135370635.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9E93_RS17800;product=aspartate/glutamate racemase;protein_id=WP_135370635.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 16878 17813 . - . ID=gene-C9E93_RS17805;Name=C9E93_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17805;old_locus_tag=C9E93_18270 NZ_PYJV01000098.1 Protein Homology CDS 16878 17813 . - 0 ID=cds-WP_000741798.1;Parent=gene-C9E93_RS17805;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9E93_RS17805;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 17931 19193 . + . ID=gene-C9E93_RS17810;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9E93_RS17810;old_locus_tag=C9E93_18275 NZ_PYJV01000098.1 Protein Homology CDS 17931 19193 . + 0 ID=cds-WP_000056587.1;Parent=gene-C9E93_RS17810;Dbxref=GenBank:WP_000056587.1;Name=WP_000056587.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9E93_RS17810;product=diaminopimelate decarboxylase;protein_id=WP_000056587.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 19203 20225 . - . ID=gene-C9E93_RS17815;Name=C9E93_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17815;old_locus_tag=C9E93_18280 NZ_PYJV01000098.1 Protein Homology CDS 19203 20225 . - 0 ID=cds-WP_000968338.1;Parent=gene-C9E93_RS17815;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9E93_RS17815;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 20236 21264 . - . ID=gene-C9E93_RS17820;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9E93_RS17820;old_locus_tag=C9E93_18285 NZ_PYJV01000098.1 Protein Homology CDS 20236 21264 . - 0 ID=cds-WP_080249409.1;Parent=gene-C9E93_RS17820;Dbxref=GenBank:WP_080249409.1;Name=WP_080249409.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9E93_RS17820;product=HTH-type transcriptional regulator GalR;protein_id=WP_080249409.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 21857 24016 . + . ID=gene-C9E93_RS17835;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=C9E93_RS17835;old_locus_tag=C9E93_18300 NZ_PYJV01000098.1 Protein Homology CDS 21857 24016 . + 0 ID=cds-WP_000896101.1;Parent=gene-C9E93_RS17835;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9E93_RS17835;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 24009 25211 . + . ID=gene-C9E93_RS17840;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9E93_RS17840;old_locus_tag=C9E93_18305 NZ_PYJV01000098.1 Protein Homology CDS 24009 25211 . + 0 ID=cds-WP_000004686.1;Parent=gene-C9E93_RS17840;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9E93_RS17840;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 25298 26338 . - . ID=gene-C9E93_RS17845;Name=C9E93_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17845;old_locus_tag=C9E93_18310 NZ_PYJV01000098.1 Protein Homology CDS 25298 26338 . - 0 ID=cds-WP_000558960.1;Parent=gene-C9E93_RS17845;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9E93_RS17845;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 26529 26747 . - . ID=gene-C9E93_RS17850;Name=C9E93_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17850;old_locus_tag=C9E93_18315 NZ_PYJV01000098.1 Protein Homology CDS 26529 26747 . - 0 ID=cds-WP_000758662.1;Parent=gene-C9E93_RS17850;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9E93_RS17850;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 26918 27631 . - . ID=gene-C9E93_RS17855;Name=C9E93_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17855;old_locus_tag=C9E93_18320 NZ_PYJV01000098.1 Protein Homology CDS 26918 27631 . - 0 ID=cds-WP_000895635.1;Parent=gene-C9E93_RS17855;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9E93_RS17855;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 27813 28508 . - . ID=gene-C9E93_RS17860;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=C9E93_RS17860;old_locus_tag=C9E93_18325 NZ_PYJV01000098.1 Protein Homology CDS 27813 28508 . - 0 ID=cds-WP_001274930.1;Parent=gene-C9E93_RS17860;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9E93_RS17860;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 29191 29721 . + . ID=gene-C9E93_RS17865;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9E93_RS17865;old_locus_tag=C9E93_18330 NZ_PYJV01000098.1 Protein Homology CDS 29191 29721 . + 0 ID=cds-WP_000564481.1;Parent=gene-C9E93_RS17865;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9E93_RS17865;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 29734 31980 . + . ID=gene-C9E93_RS17870;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E93_RS17870;old_locus_tag=C9E93_18335 NZ_PYJV01000098.1 Protein Homology CDS 29734 31980 . + 0 ID=cds-WP_000957888.1;Parent=gene-C9E93_RS17870;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9E93_RS17870;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 32196 33071 . + . ID=gene-C9E93_RS17875;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9E93_RS17875;old_locus_tag=C9E93_18340 NZ_PYJV01000098.1 Protein Homology CDS 32196 33071 . + 0 ID=cds-WP_000204645.1;Parent=gene-C9E93_RS17875;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9E93_RS17875;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 33078 33872 . + . ID=gene-C9E93_RS17880;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=C9E93_RS17880;old_locus_tag=C9E93_18345 NZ_PYJV01000098.1 Protein Homology CDS 33078 33872 . + 0 ID=cds-WP_000816247.1;Parent=gene-C9E93_RS17880;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9E93_RS17880;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 34057 34527 . + . ID=gene-C9E93_RS17890;Name=C9E93_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17890;old_locus_tag=C9E93_18355 NZ_PYJV01000098.1 Protein Homology CDS 34057 34527 . + 0 ID=cds-WP_000744668.1;Parent=gene-C9E93_RS17890;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9E93_RS17890;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 34518 35081 . + . ID=gene-C9E93_RS17895;Name=C9E93_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17895;old_locus_tag=C9E93_18360 NZ_PYJV01000098.1 Protein Homology CDS 34518 35081 . + 0 ID=cds-WP_000029153.1;Parent=gene-C9E93_RS17895;Dbxref=GenBank:WP_000029153.1;Name=WP_000029153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9E93_RS17895;product=prepilin peptidase-dependent protein;protein_id=WP_000029153.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 35078 35485 . + . ID=gene-C9E93_RS17900;Name=C9E93_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17900;old_locus_tag=C9E93_18365 NZ_PYJV01000098.1 Protein Homology CDS 35078 35485 . + 0 ID=cds-WP_001078532.1;Parent=gene-C9E93_RS17900;Dbxref=GenBank:WP_001078532.1;Name=WP_001078532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9E93_RS17900;product=DUF2509 family protein;protein_id=WP_001078532.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 35470 35790 . + . ID=gene-C9E93_RS17905;Name=C9E93_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17905;old_locus_tag=C9E93_18370 NZ_PYJV01000098.1 Protein Homology CDS 35470 35790 . + 0 ID=cds-WP_000019291.1;Parent=gene-C9E93_RS17905;Dbxref=GenBank:WP_000019291.1;Name=WP_000019291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9E93_RS17905;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019291.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 35806 39177 . + . ID=gene-C9E93_RS17910;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9E93_RS17910;old_locus_tag=C9E93_18375 NZ_PYJV01000098.1 Protein Homology CDS 35806 39177 . + 0 ID=cds-WP_000946832.1;Parent=gene-C9E93_RS17910;Dbxref=GenBank:WP_000946832.1;Name=WP_000946832.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9E93_RS17910;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946832.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 39355 42243 . + . ID=gene-C9E93_RS17915;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9E93_RS17915;old_locus_tag=C9E93_18380 NZ_PYJV01000098.1 Protein Homology CDS 39355 42243 . + 0 ID=cds-WP_135370634.1;Parent=gene-C9E93_RS17915;Dbxref=GenBank:WP_135370634.1;Name=WP_135370634.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9E93_RS17915;product=pitrilysin;protein_id=WP_135370634.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 42236 45781 . + . ID=gene-C9E93_RS17920;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9E93_RS17920;old_locus_tag=C9E93_18385 NZ_PYJV01000098.1 Protein Homology CDS 42236 45781 . + 0 ID=cds-WP_135370633.1;Parent=gene-C9E93_RS17920;Dbxref=GenBank:WP_135370633.1;Name=WP_135370633.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9E93_RS17920;product=exodeoxyribonuclease V subunit beta;protein_id=WP_135370633.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 45778 47613 . + . ID=gene-C9E93_RS17925;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9E93_RS17925;old_locus_tag=C9E93_18390 NZ_PYJV01000098.1 Protein Homology CDS 45778 47613 . + 0 ID=cds-WP_135370632.1;Parent=gene-C9E93_RS17925;Dbxref=GenBank:WP_135370632.1;Name=WP_135370632.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=C9E93_RS17925;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_135370632.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 47716 49047 . - . ID=gene-C9E93_RS17930;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9E93_RS17930;old_locus_tag=C9E93_18395 NZ_PYJV01000098.1 Protein Homology CDS 47716 49047 . - 0 ID=cds-WP_000588964.1;Parent=gene-C9E93_RS17930;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9E93_RS17930;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_PYJV01000098.1 RefSeq gene 49280 50533 . + . ID=gene-C9E93_RS17935;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9E93_RS17935;old_locus_tag=C9E93_18400 NZ_PYJV01000098.1 Protein Homology CDS 49280 50533 . + 0 ID=cds-WP_000011919.1;Parent=gene-C9E93_RS17935;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9E93_RS17935;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 ##sequence-region NZ_PYJV01000033.1 1 50302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000033.1 RefSeq region 1 50302 . + . ID=NZ_PYJV01000033.1:1..50302;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000033.1 RefSeq gene 204 319 . + . ID=gene-C9E93_RS04785;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E93_RS04785;old_locus_tag=C9E93_04955 NZ_PYJV01000033.1 cmsearch rRNA 204 319 . + . ID=rna-C9E93_RS04785;Parent=gene-C9E93_RS04785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS04785;product=5S ribosomal RNA NZ_PYJV01000033.1 cmsearch exon 204 319 . + . ID=exon-C9E93_RS04785-1;Parent=rna-C9E93_RS04785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS04785;product=5S ribosomal RNA NZ_PYJV01000033.1 RefSeq gene 622 1137 . - . ID=gene-C9E93_RS04795;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9E93_RS04795;old_locus_tag=C9E93_04965 NZ_PYJV01000033.1 Protein Homology CDS 622 1137 . - 0 ID=cds-WP_010989085.1;Parent=gene-C9E93_RS04795;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9E93_RS04795;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 1134 1718 . - . ID=gene-C9E93_RS04800;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9E93_RS04800;old_locus_tag=C9E93_04970 NZ_PYJV01000033.1 Protein Homology CDS 1134 1718 . - 0 ID=cds-WP_079903158.1;Parent=gene-C9E93_RS04800;Dbxref=GenBank:WP_079903158.1;Name=WP_079903158.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9E93_RS04800;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_079903158.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 1788 2057 . + . ID=gene-C9E93_RS04805;Name=C9E93_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04805;old_locus_tag=C9E93_04975 NZ_PYJV01000033.1 Protein Homology CDS 1788 2057 . + 0 ID=cds-WP_135370274.1;Parent=gene-C9E93_RS04805;Dbxref=GenBank:WP_135370274.1;Name=WP_135370274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9E93_RS04805;product=YihD family protein;protein_id=WP_135370274.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 2134 3120 . + . ID=gene-C9E93_RS04810;Name=C9E93_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04810;old_locus_tag=C9E93_04980 NZ_PYJV01000033.1 Protein Homology CDS 2134 3120 . + 0 ID=cds-WP_001583726.1;Parent=gene-C9E93_RS04810;Dbxref=GenBank:WP_001583726.1;Name=WP_001583726.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9E93_RS04810;product=serine/threonine protein kinase;protein_id=WP_001583726.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 3137 3760 . + . ID=gene-C9E93_RS04815;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9E93_RS04815;old_locus_tag=C9E93_04985 NZ_PYJV01000033.1 Protein Homology CDS 3137 3760 . + 0 ID=cds-WP_000725364.1;Parent=gene-C9E93_RS04815;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9E93_RS04815;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 3773 4681 . - . ID=gene-C9E93_RS04820;Name=C9E93_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04820;old_locus_tag=C9E93_04990 NZ_PYJV01000033.1 Protein Homology CDS 3773 4681 . - 0 ID=cds-WP_135370275.1;Parent=gene-C9E93_RS04820;Dbxref=GenBank:WP_135370275.1;Name=WP_135370275.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=C9E93_RS04820;product=acyltransferase;protein_id=WP_135370275.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 5069 7855 . + . ID=gene-C9E93_RS04830;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9E93_RS04830;old_locus_tag=C9E93_05000 NZ_PYJV01000033.1 Protein Homology CDS 5069 7855 . + 0 ID=cds-WP_000249972.1;Parent=gene-C9E93_RS04830;Dbxref=GenBank:WP_000249972.1;Name=WP_000249972.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9E93_RS04830;product=DNA polymerase I;protein_id=WP_000249972.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 8022 8069 . + . ID=gene-C9E93_RS24145;Name=C9E93_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24145 NZ_PYJV01000033.1 Protein Homology CDS 8022 8069 . + 0 ID=cds-WP_071892919.1;Parent=gene-C9E93_RS24145;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=C9E93_RS24145;product=spot 42 RNA%2C inhibition of DNA synthesis;protein_id=WP_071892919.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 8190 8822 . - . ID=gene-C9E93_RS04835;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9E93_RS04835;old_locus_tag=C9E93_05005 NZ_PYJV01000033.1 Protein Homology CDS 8190 8822 . - 0 ID=cds-WP_000183327.1;Parent=gene-C9E93_RS04835;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9E93_RS04835;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 9062 9286 . + . ID=gene-C9E93_RS04840;Name=C9E93_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04840;old_locus_tag=C9E93_05010 NZ_PYJV01000033.1 Protein Homology CDS 9062 9286 . + 0 ID=cds-WP_001541209.1;Parent=gene-C9E93_RS04840;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9E93_RS04840;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 9405 9920 . + . ID=gene-C9E93_RS04845;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9E93_RS04845;old_locus_tag=C9E93_05015 NZ_PYJV01000033.1 Protein Homology CDS 9405 9920 . + 0 ID=cds-WP_000743292.1;Parent=gene-C9E93_RS04845;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9E93_RS04845;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 10109 11482 . + . ID=gene-C9E93_RS04850;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9E93_RS04850;old_locus_tag=C9E93_05020 NZ_PYJV01000033.1 Protein Homology CDS 10109 11482 . + 0 ID=cds-WP_000003528.1;Parent=gene-C9E93_RS04850;Dbxref=GenBank:WP_000003528.1;Name=WP_000003528.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9E93_RS04850;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003528.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 11572 11682 . - . ID=gene-C9E93_RS04855;Name=C9E93_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04855;old_locus_tag=C9E93_05025 NZ_PYJV01000033.1 Protein Homology CDS 11572 11682 . - 0 ID=cds-WP_001578131.1;Parent=gene-C9E93_RS04855;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9E93_RS04855;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 11795 13204 . - . ID=gene-C9E93_RS04860;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9E93_RS04860;old_locus_tag=C9E93_05030 NZ_PYJV01000033.1 Protein Homology CDS 11795 13204 . - 0 ID=cds-WP_135370276.1;Parent=gene-C9E93_RS04860;Dbxref=GenBank:WP_135370276.1;Name=WP_135370276.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9E93_RS04860;product=nitrogen regulation protein NR(I);protein_id=WP_135370276.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 13213 14262 . - . ID=gene-C9E93_RS04865;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9E93_RS04865;old_locus_tag=C9E93_05035 NZ_PYJV01000033.1 Protein Homology CDS 13213 14262 . - 0 ID=cds-WP_000146194.1;Parent=gene-C9E93_RS04865;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9E93_RS04865;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 14537 15946 . - . ID=gene-C9E93_RS04875;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9E93_RS04875;old_locus_tag=C9E93_05045 NZ_PYJV01000033.1 Protein Homology CDS 14537 15946 . - 0 ID=cds-WP_001271699.1;Parent=gene-C9E93_RS04875;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9E93_RS04875;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 16322 18145 . + . ID=gene-C9E93_RS04880;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9E93_RS04880;old_locus_tag=C9E93_05055 NZ_PYJV01000033.1 Protein Homology CDS 16322 18145 . + 0 ID=cds-WP_000572064.1;Parent=gene-C9E93_RS04880;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9E93_RS04880;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 18200 18934 . - . ID=gene-C9E93_RS04885;Name=C9E93_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04885;old_locus_tag=C9E93_05060 NZ_PYJV01000033.1 Protein Homology CDS 18200 18934 . - 0 ID=cds-WP_135370277.1;Parent=gene-C9E93_RS04885;Dbxref=GenBank:WP_135370277.1;Name=WP_135370277.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9E93_RS04885;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_135370277.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 18919 19797 . - . ID=gene-C9E93_RS04890;Name=C9E93_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04890;old_locus_tag=C9E93_05065 NZ_PYJV01000033.1 Protein Homology CDS 18919 19797 . - 0 ID=cds-WP_080190212.1;Parent=gene-C9E93_RS04890;Dbxref=GenBank:WP_080190212.1;Name=WP_080190212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9E93_RS04890;product=STM4011 family radical SAM protein;protein_id=WP_080190212.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 19794 21035 . - . ID=gene-C9E93_RS04895;Name=C9E93_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04895;old_locus_tag=C9E93_05070 NZ_PYJV01000033.1 Protein Homology CDS 19794 21035 . - 0 ID=cds-WP_135370278.1;Parent=gene-C9E93_RS04895;Dbxref=GenBank:WP_135370278.1;Name=WP_135370278.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9E93_RS04895;product=STM4012 family radical SAM protein;protein_id=WP_135370278.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 21037 21912 . - . ID=gene-C9E93_RS04900;Name=C9E93_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04900;old_locus_tag=C9E93_05075 NZ_PYJV01000033.1 Protein Homology CDS 21037 21912 . - 0 ID=cds-WP_135370279.1;Parent=gene-C9E93_RS04900;Dbxref=GenBank:WP_135370279.1;Name=WP_135370279.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9E93_RS04900;product=STM4013/SEN3800 family hydrolase;protein_id=WP_135370279.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 21905 22930 . - . ID=gene-C9E93_RS04905;Name=C9E93_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04905;old_locus_tag=C9E93_05080 NZ_PYJV01000033.1 Protein Homology CDS 21905 22930 . - 0 ID=cds-WP_000337354.1;Parent=gene-C9E93_RS04905;Dbxref=GenBank:WP_000337354.1;Name=WP_000337354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9E93_RS04905;product=STM4014 family protein;protein_id=WP_000337354.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 22943 23791 . - . ID=gene-C9E93_RS04910;Name=C9E93_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04910;old_locus_tag=C9E93_05085 NZ_PYJV01000033.1 Protein Homology CDS 22943 23791 . - 0 ID=cds-WP_135370280.1;Parent=gene-C9E93_RS04910;Dbxref=GenBank:WP_135370280.1;Name=WP_135370280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9E93_RS04910;product=STM4015 family protein;protein_id=WP_135370280.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 23948 24640 . - . ID=gene-C9E93_RS04915;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9E93_RS04915;old_locus_tag=C9E93_05090 NZ_PYJV01000033.1 Protein Homology CDS 23948 24640 . - 0 ID=cds-WP_000838831.1;Parent=gene-C9E93_RS04915;Dbxref=GenBank:WP_000838831.1;Name=WP_000838831.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9E93_RS04915;product=porin OmpL;protein_id=WP_000838831.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 24708 26126 . - . ID=gene-C9E93_RS04920;Name=C9E93_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04920;old_locus_tag=C9E93_05095 NZ_PYJV01000033.1 Protein Homology CDS 24708 26126 . - 0 ID=cds-WP_001112785.1;Parent=gene-C9E93_RS04920;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9E93_RS04920;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 26172 27554 . - . ID=gene-C9E93_RS04925;Name=C9E93_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04925;old_locus_tag=C9E93_05100 NZ_PYJV01000033.1 Protein Homology CDS 26172 27554 . - 0 ID=cds-WP_000084233.1;Parent=gene-C9E93_RS04925;Dbxref=GenBank:WP_000084233.1;Name=WP_000084233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=C9E93_RS04925;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 27600 29636 . - . ID=gene-C9E93_RS04930;Name=C9E93_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04930;old_locus_tag=C9E93_05105 NZ_PYJV01000033.1 Protein Homology CDS 27600 29636 . - 0 ID=cds-WP_135370281.1;Parent=gene-C9E93_RS04930;Dbxref=GenBank:WP_135370281.1;Name=WP_135370281.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9E93_RS04930;product=alpha-glucosidase;protein_id=WP_135370281.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 29760 30635 . - . ID=gene-C9E93_RS04935;Name=C9E93_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04935;old_locus_tag=C9E93_05110 NZ_PYJV01000033.1 Protein Homology CDS 29760 30635 . - 0 ID=cds-WP_135370282.1;Parent=gene-C9E93_RS04935;Dbxref=GenBank:WP_135370282.1;Name=WP_135370282.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9E93_RS04935;product=sulfite exporter TauE/SafE family protein;protein_id=WP_135370282.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 30724 31626 . - . ID=gene-C9E93_RS04940;Name=C9E93_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04940;old_locus_tag=C9E93_05115 NZ_PYJV01000033.1 Protein Homology CDS 30724 31626 . - 0 ID=cds-WP_024131638.1;Parent=gene-C9E93_RS04940;Dbxref=GenBank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=C9E93_RS04940;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 31698 32939 . - . ID=gene-C9E93_RS04945;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9E93_RS04945;old_locus_tag=C9E93_05120 NZ_PYJV01000033.1 Protein Homology CDS 31698 32939 . - 0 ID=cds-WP_000870940.1;Parent=gene-C9E93_RS04945;Dbxref=GenBank:WP_000870940.1;Name=WP_000870940.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=C9E93_RS04945;product=sulfoquinovose isomerase;protein_id=WP_000870940.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 32955 33833 . - . ID=gene-C9E93_RS04950;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=C9E93_RS04950;old_locus_tag=C9E93_05125 NZ_PYJV01000033.1 Protein Homology CDS 32955 33833 . - 0 ID=cds-WP_001067412.1;Parent=gene-C9E93_RS04950;Dbxref=GenBank:WP_001067412.1;Name=WP_001067412.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9E93_RS04950;product=sulfofructosephosphate aldolase;protein_id=WP_001067412.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 33856 34752 . - . ID=gene-C9E93_RS04955;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9E93_RS04955;old_locus_tag=C9E93_05130 NZ_PYJV01000033.1 Protein Homology CDS 33856 34752 . - 0 ID=cds-WP_023242402.1;Parent=gene-C9E93_RS04955;Dbxref=GenBank:WP_023242402.1;Name=WP_023242402.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9E93_RS04955;product=sulfolactaldehyde 3-reductase;protein_id=WP_023242402.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 34917 35813 . + . ID=gene-C9E93_RS04960;Name=C9E93_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04960;old_locus_tag=C9E93_05135 NZ_PYJV01000033.1 Protein Homology CDS 34917 35813 . + 0 ID=cds-WP_001651900.1;Parent=gene-C9E93_RS04960;Dbxref=GenBank:WP_001651900.1;Name=WP_001651900.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9E93_RS04960;product=sugar kinase;protein_id=WP_001651900.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 35847 36650 . + . ID=gene-C9E93_RS04965;Name=C9E93_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04965;old_locus_tag=C9E93_05140 NZ_PYJV01000033.1 Protein Homology CDS 35847 36650 . + 0 ID=cds-WP_000059693.1;Parent=gene-C9E93_RS04965;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9E93_RS04965;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 36841 37440 . + . ID=gene-C9E93_RS04970;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9E93_RS04970;old_locus_tag=C9E93_05145 NZ_PYJV01000033.1 Protein Homology CDS 36841 37440 . + 0 ID=cds-WP_000965695.1;Parent=gene-C9E93_RS04970;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9E93_RS04970;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 37434 38306 . + . ID=gene-C9E93_RS04975;Name=C9E93_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04975;old_locus_tag=C9E93_05150 NZ_PYJV01000033.1 Protein Homology CDS 37434 38306 . + 0 ID=cds-WP_000921423.1;Parent=gene-C9E93_RS04975;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9E93_RS04975;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 38303 38740 . + . ID=gene-C9E93_RS04980;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9E93_RS04980;old_locus_tag=C9E93_05155 NZ_PYJV01000033.1 Protein Homology CDS 38303 38740 . + 0 ID=cds-WP_000560969.1;Parent=gene-C9E93_RS04980;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9E93_RS04980;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 38785 39726 . + . ID=gene-C9E93_RS04985;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9E93_RS04985;old_locus_tag=C9E93_05160 NZ_PYJV01000033.1 Protein Homology CDS 38785 39726 . + 0 ID=cds-WP_001518251.1;Parent=gene-C9E93_RS04985;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9E93_RS04985;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 39741 40187 . - . ID=gene-C9E93_RS04990;Name=C9E93_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04990;old_locus_tag=C9E93_05165 NZ_PYJV01000033.1 Protein Homology CDS 39741 40187 . - 0 ID=cds-WP_080111132.1;Parent=gene-C9E93_RS04990;Dbxref=GenBank:WP_080111132.1;Name=WP_080111132.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=C9E93_RS04990;product=helix-turn-helix domain-containing protein;protein_id=WP_080111132.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 40184 40495 . - . ID=gene-C9E93_RS04995;Name=C9E93_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS04995;old_locus_tag=C9E93_05170 NZ_PYJV01000033.1 Protein Homology CDS 40184 40495 . - 0 ID=cds-WP_000558163.1;Parent=gene-C9E93_RS04995;Dbxref=GenBank:WP_000558163.1;Name=WP_000558163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9E93_RS04995;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558163.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 40581 41510 . - . ID=gene-C9E93_RS05000;Name=C9E93_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05000;old_locus_tag=C9E93_05175 NZ_PYJV01000033.1 Protein Homology CDS 40581 41510 . - 0 ID=cds-WP_135370283.1;Parent=gene-C9E93_RS05000;Dbxref=GenBank:WP_135370283.1;Name=WP_135370283.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9E93_RS05000;product=alpha/beta hydrolase;protein_id=WP_135370283.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 41715 41957 . + . ID=gene-C9E93_RS05005;Name=C9E93_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05005;old_locus_tag=C9E93_05180 NZ_PYJV01000033.1 Protein Homology CDS 41715 41957 . + 0 ID=cds-WP_001523745.1;Parent=gene-C9E93_RS05005;Dbxref=GenBank:WP_001523745.1;Name=WP_001523745.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224335.1;locus_tag=C9E93_RS05005;product=CopG family transcriptional regulator;protein_id=WP_001523745.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 41957 42331 . + . ID=gene-C9E93_RS05010;Name=C9E93_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05010;old_locus_tag=C9E93_05185 NZ_PYJV01000033.1 Protein Homology CDS 41957 42331 . + 0 ID=cds-WP_000238494.1;Parent=gene-C9E93_RS05010;Dbxref=GenBank:WP_000238494.1;Name=WP_000238494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121821.1;locus_tag=C9E93_RS05010;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000238494.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 42369 43298 . - . ID=gene-C9E93_RS05015;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9E93_RS05015;old_locus_tag=C9E93_05190 NZ_PYJV01000033.1 Protein Homology CDS 42369 43298 . - 0 ID=cds-WP_000027730.1;Parent=gene-C9E93_RS05015;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9E93_RS05015;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 43295 43930 . - . ID=gene-C9E93_RS05020;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=C9E93_RS05020;old_locus_tag=C9E93_05195 NZ_PYJV01000033.1 Protein Homology CDS 43295 43930 . - 0 ID=cds-WP_000829025.1;Parent=gene-C9E93_RS05020;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9E93_RS05020;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 43927 44829 . - . ID=gene-C9E93_RS05025;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E93_RS05025;old_locus_tag=C9E93_05200 NZ_PYJV01000033.1 Protein Homology CDS 43927 44829 . - 0 ID=cds-WP_000331361.1;Parent=gene-C9E93_RS05025;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9E93_RS05025;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 44842 47892 . - . ID=gene-C9E93_RS05030;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E93_RS05030;old_locus_tag=C9E93_05205 NZ_PYJV01000033.1 Protein Homology CDS 44842 47892 . - 0 ID=cds-WP_077248424.1;Parent=gene-C9E93_RS05030;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9E93_RS05030;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:complement(47305..47307)%2Caa:Sec);transl_table=11 NZ_PYJV01000033.1 RefSeq gene 48087 48923 . + . ID=gene-C9E93_RS05035;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9E93_RS05035;old_locus_tag=C9E93_05210 NZ_PYJV01000033.1 Protein Homology CDS 48087 48923 . + 0 ID=cds-WP_001059744.1;Parent=gene-C9E93_RS05035;Dbxref=GenBank:WP_001059744.1;Name=WP_001059744.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9E93_RS05035;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059744.1;transl_table=11 NZ_PYJV01000033.1 RefSeq gene 49191 50222 . - . ID=gene-C9E93_RS05040;Name=C9E93_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05040;old_locus_tag=C9E93_05215 NZ_PYJV01000033.1 Protein Homology CDS 49191 50222 . - 0 ID=cds-WP_000710967.1;Parent=gene-C9E93_RS05040;Dbxref=GenBank:WP_000710967.1;Name=WP_000710967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9E93_RS05040;product=YiiG family protein;protein_id=WP_000710967.1;transl_table=11 ##sequence-region NZ_PYJV01000017.1 1 47784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000017.1 RefSeq region 1 47784 . + . ID=NZ_PYJV01000017.1:1..47784;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000017.1 RefSeq gene 5 1168 . + . ID=gene-C9E93_RS01880;Name=C9E93_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01880;old_locus_tag=C9E93_01960 NZ_PYJV01000017.1 Protein Homology CDS 5 1168 . + 0 ID=cds-WP_000977208.1;Parent=gene-C9E93_RS01880;Dbxref=GenBank:WP_000977208.1;Name=WP_000977208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9E93_RS01880;product=metallo-dependent hydrolase;protein_id=WP_000977208.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 1165 2373 . + . ID=gene-C9E93_RS01885;Name=C9E93_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01885;old_locus_tag=C9E93_01965 NZ_PYJV01000017.1 Protein Homology CDS 1165 2373 . + 0 ID=cds-WP_117380604.1;Parent=gene-C9E93_RS01885;Dbxref=GenBank:WP_117380604.1;Name=WP_117380604.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9E93_RS01885;product=MFS transporter;protein_id=WP_117380604.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 2427 2771 . - . ID=gene-C9E93_RS01890;Name=C9E93_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01890;old_locus_tag=C9E93_01970 NZ_PYJV01000017.1 Protein Homology CDS 2427 2771 . - 0 ID=cds-WP_001219167.1;Parent=gene-C9E93_RS01890;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9E93_RS01890;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 2774 6553 . - . ID=gene-C9E93_RS01895;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9E93_RS01895;old_locus_tag=C9E93_01975 NZ_PYJV01000017.1 Protein Homology CDS 2774 6553 . - 0 ID=cds-WP_135369969.1;Parent=gene-C9E93_RS01895;Dbxref=GenBank:WP_135369969.1;Name=WP_135369969.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9E93_RS01895;product=autotransporter assembly complex protein TamB;protein_id=WP_135369969.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 6550 8283 . - . ID=gene-C9E93_RS01900;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9E93_RS01900;old_locus_tag=C9E93_01980 NZ_PYJV01000017.1 Protein Homology CDS 6550 8283 . - 0 ID=cds-WP_001120230.1;Parent=gene-C9E93_RS01900;Dbxref=GenBank:WP_001120230.1;Name=WP_001120230.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9E93_RS01900;product=autotransporter assembly complex protein TamA;protein_id=WP_001120230.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 8496 9134 . + . ID=gene-C9E93_RS01905;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9E93_RS01905;old_locus_tag=C9E93_01985 NZ_PYJV01000017.1 Protein Homology CDS 8496 9134 . + 0 ID=cds-WP_135369970.1;Parent=gene-C9E93_RS01905;Dbxref=GenBank:WP_135369970.1;Name=WP_135369970.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9E93_RS01905;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_135369970.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 9317 10660 . + . ID=gene-C9E93_RS01910;Name=C9E93_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01910;old_locus_tag=C9E93_01990 NZ_PYJV01000017.1 Protein Homology CDS 9317 10660 . + 0 ID=cds-WP_000934972.1;Parent=gene-C9E93_RS01910;Dbxref=GenBank:WP_000934972.1;Name=WP_000934972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9E93_RS01910;product=hemolysin family protein;protein_id=WP_000934972.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 10745 10951 . - . ID=gene-C9E93_RS01915;Name=C9E93_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01915;old_locus_tag=C9E93_01995 NZ_PYJV01000017.1 Protein Homology CDS 10745 10951 . - 0 ID=cds-WP_000689229.1;Parent=gene-C9E93_RS01915;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9E93_RS01915;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 11278 11835 . + . ID=gene-C9E93_RS01925;Name=C9E93_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01925;old_locus_tag=C9E93_02005 NZ_PYJV01000017.1 Protein Homology CDS 11278 11835 . + 0 ID=cds-WP_000175301.1;Parent=gene-C9E93_RS01925;Dbxref=GenBank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9E93_RS01925;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 11825 12565 . - . ID=gene-C9E93_RS01930;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9E93_RS01930;old_locus_tag=C9E93_02010 NZ_PYJV01000017.1 Protein Homology CDS 11825 12565 . - 0 ID=cds-WP_000893398.1;Parent=gene-C9E93_RS01930;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9E93_RS01930;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 12833 14776 . + . ID=gene-C9E93_RS01940;Name=C9E93_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01940;old_locus_tag=C9E93_02020 NZ_PYJV01000017.1 Protein Homology CDS 12833 14776 . + 0 ID=cds-WP_135369972.1;Parent=gene-C9E93_RS01940;Dbxref=GenBank:WP_135369972.1;Name=WP_135369972.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9E93_RS01940;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_135369972.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 14834 15220 . - . ID=gene-C9E93_RS01945;Name=C9E93_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01945;old_locus_tag=C9E93_02025 NZ_PYJV01000017.1 Protein Homology CDS 14834 15220 . - 0 ID=cds-WP_001201295.1;Parent=gene-C9E93_RS01945;Dbxref=GenBank:WP_001201295.1;Name=WP_001201295.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9E93_RS01945;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201295.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 15308 16156 . + . ID=gene-C9E93_RS01950;Name=C9E93_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01950;old_locus_tag=C9E93_02030 NZ_PYJV01000017.1 Protein Homology CDS 15308 16156 . + 0 ID=cds-WP_094889049.1;Parent=gene-C9E93_RS01950;Dbxref=GenBank:WP_094889049.1;Name=WP_094889049.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9E93_RS01950;product=SDR family oxidoreductase;protein_id=WP_094889049.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 16237 17202 . + . ID=gene-C9E93_RS01955;Name=C9E93_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01955;old_locus_tag=C9E93_02035 NZ_PYJV01000017.1 Protein Homology CDS 16237 17202 . + 0 ID=cds-WP_000623290.1;Parent=gene-C9E93_RS01955;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9E93_RS01955;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 17305 17967 . + . ID=gene-C9E93_RS01960;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9E93_RS01960;old_locus_tag=C9E93_02040 NZ_PYJV01000017.1 Protein Homology CDS 17305 17967 . + 0 ID=cds-WP_000331471.1;Parent=gene-C9E93_RS01960;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9E93_RS01960;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 18079 19488 . - . ID=gene-C9E93_RS01965;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=C9E93_RS01965;old_locus_tag=C9E93_02045 NZ_PYJV01000017.1 Protein Homology CDS 18079 19488 . - 0 ID=cds-WP_000228322.1;Parent=gene-C9E93_RS01965;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9E93_RS01965;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 19784 20404 . - . ID=gene-C9E93_RS01970;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9E93_RS01970;old_locus_tag=C9E93_02050 NZ_PYJV01000017.1 Protein Homology CDS 19784 20404 . - 0 ID=cds-WP_000235161.1;Parent=gene-C9E93_RS01970;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9E93_RS01970;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 20624 21259 . + . ID=gene-C9E93_RS01975;Name=C9E93_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01975;old_locus_tag=C9E93_02060 NZ_PYJV01000017.1 Protein Homology CDS 20624 21259 . + 0 ID=cds-WP_135400581.1;Parent=gene-C9E93_RS01975;Dbxref=GenBank:WP_135400581.1;Name=WP_135400581.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9E93_RS01975;product=OapA family protein;protein_id=WP_135400581.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 21243 21890 . - . ID=gene-C9E93_RS01980;Name=C9E93_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01980;old_locus_tag=C9E93_02065 NZ_PYJV01000017.1 Protein Homology CDS 21243 21890 . - 0 ID=cds-WP_058113164.1;Parent=gene-C9E93_RS01980;Dbxref=GenBank:WP_058113164.1;Name=WP_058113164.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=C9E93_RS01980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_058113164.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 22104 22895 . + . ID=gene-C9E93_RS01985;Name=C9E93_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01985;old_locus_tag=C9E93_02070 NZ_PYJV01000017.1 Protein Homology CDS 22104 22895 . + 0 ID=cds-WP_079775582.1;Parent=gene-C9E93_RS01985;Dbxref=GenBank:WP_079775582.1;Name=WP_079775582.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=C9E93_RS01985;product=3-ketoacyl-ACP reductase;protein_id=WP_079775582.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 22905 23750 . + . ID=gene-C9E93_RS01990;Name=C9E93_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01990;old_locus_tag=C9E93_02075 NZ_PYJV01000017.1 Protein Homology CDS 22905 23750 . + 0 ID=cds-WP_058113162.1;Parent=gene-C9E93_RS01990;Dbxref=GenBank:WP_058113162.1;Name=WP_058113162.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=C9E93_RS01990;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_058113162.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 23760 24536 . + . ID=gene-C9E93_RS01995;Name=C9E93_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01995;old_locus_tag=C9E93_02080 NZ_PYJV01000017.1 Protein Homology CDS 23760 24536 . + 0 ID=cds-WP_048590422.1;Parent=gene-C9E93_RS01995;Dbxref=GenBank:WP_048590422.1;Name=WP_048590422.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=C9E93_RS01995;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_048590422.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 24547 26088 . + . ID=gene-C9E93_RS02000;Name=C9E93_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02000;old_locus_tag=C9E93_02085 NZ_PYJV01000017.1 Protein Homology CDS 24547 26088 . + 0 ID=cds-WP_079775581.1;Parent=gene-C9E93_RS02000;Dbxref=GenBank:WP_079775581.1;Name=WP_079775581.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=C9E93_RS02000;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_079775581.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 26085 28160 . + . ID=gene-C9E93_RS02005;Name=C9E93_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02005;old_locus_tag=C9E93_02090 NZ_PYJV01000017.1 Protein Homology CDS 26085 28160 . + 0 ID=cds-WP_135400582.1;Parent=gene-C9E93_RS02005;Dbxref=GenBank:WP_135400582.1;Name=WP_135400582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080364.1;locus_tag=C9E93_RS02005;product=FAD-dependent oxidoreductase;protein_id=WP_135400582.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 28211 29488 . + . ID=gene-C9E93_RS02010;Name=C9E93_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02010;old_locus_tag=C9E93_02095 NZ_PYJV01000017.1 Protein Homology CDS 28211 29488 . + 0 ID=cds-WP_048590425.1;Parent=gene-C9E93_RS02010;Dbxref=GenBank:WP_048590425.1;Name=WP_048590425.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007671403.1;locus_tag=C9E93_RS02010;product=MFS transporter;protein_id=WP_048590425.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 29528 30463 . - . ID=gene-C9E93_RS02015;Name=C9E93_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02015;old_locus_tag=C9E93_02100 NZ_PYJV01000017.1 Protein Homology CDS 29528 30463 . - 0 ID=cds-WP_135400583.1;Parent=gene-C9E93_RS02015;Dbxref=GenBank:WP_135400583.1;Name=WP_135400583.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381081.1;locus_tag=C9E93_RS02015;product=DMT family transporter;protein_id=WP_135400583.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 30611 31060 . - . ID=gene-C9E93_RS02020;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9E93_RS02020;old_locus_tag=C9E93_02105 NZ_PYJV01000017.1 Protein Homology CDS 30611 31060 . - 0 ID=cds-WP_001196065.1;Parent=gene-C9E93_RS02020;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9E93_RS02020;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 31102 31329 . - . ID=gene-C9E93_RS02025;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9E93_RS02025;old_locus_tag=C9E93_02110 NZ_PYJV01000017.1 Protein Homology CDS 31102 31329 . - 0 ID=cds-WP_000135199.1;Parent=gene-C9E93_RS02025;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9E93_RS02025;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 31334 31648 . - . ID=gene-C9E93_RS02030;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9E93_RS02030;old_locus_tag=C9E93_02115 NZ_PYJV01000017.1 Protein Homology CDS 31334 31648 . - 0 ID=cds-WP_001519453.1;Parent=gene-C9E93_RS02030;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9E93_RS02030;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 31655 32050 . - . ID=gene-C9E93_RS02035;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9E93_RS02035;old_locus_tag=C9E93_02120 NZ_PYJV01000017.1 Protein Homology CDS 31655 32050 . - 0 ID=cds-WP_001216673.1;Parent=gene-C9E93_RS02035;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9E93_RS02035;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 32437 32712 . + . ID=gene-C9E93_RS02040;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9E93_RS02040;old_locus_tag=C9E93_02125 NZ_PYJV01000017.1 Protein Homology CDS 32437 32712 . + 0 ID=cds-WP_000466074.1;Parent=gene-C9E93_RS02040;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9E93_RS02040;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 32765 33322 . - . ID=gene-C9E93_RS02045;Name=C9E93_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02045;old_locus_tag=C9E93_02130 NZ_PYJV01000017.1 Protein Homology CDS 32765 33322 . - 0 ID=cds-WP_000026294.1;Parent=gene-C9E93_RS02045;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9E93_RS02045;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 33410 34096 . - . ID=gene-C9E93_RS02050;Name=C9E93_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02050;old_locus_tag=C9E93_02135 NZ_PYJV01000017.1 Protein Homology CDS 33410 34096 . - 0 ID=cds-WP_001170771.1;Parent=gene-C9E93_RS02050;Dbxref=GenBank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9E93_RS02050;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 34096 34950 . - . ID=gene-C9E93_RS02055;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9E93_RS02055;old_locus_tag=C9E93_02140 NZ_PYJV01000017.1 Protein Homology CDS 34096 34950 . - 0 ID=cds-WP_000949530.1;Parent=gene-C9E93_RS02055;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9E93_RS02055;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 34960 35610 . - . ID=gene-C9E93_RS02060;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E93_RS02060;old_locus_tag=C9E93_02145 NZ_PYJV01000017.1 Protein Homology CDS 34960 35610 . - 0 ID=cds-WP_000056761.1;Parent=gene-C9E93_RS02060;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9E93_RS02060;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 35624 36088 . - . ID=gene-C9E93_RS02065;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9E93_RS02065;old_locus_tag=C9E93_02150 NZ_PYJV01000017.1 Protein Homology CDS 35624 36088 . - 0 ID=cds-WP_000776531.1;Parent=gene-C9E93_RS02065;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9E93_RS02065;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 36098 36403 . - . ID=gene-C9E93_RS02070;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9E93_RS02070;old_locus_tag=C9E93_02155 NZ_PYJV01000017.1 Protein Homology CDS 36098 36403 . - 0 ID=cds-WP_000218362.1;Parent=gene-C9E93_RS02070;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=C9E93_RS02070;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 36419 37816 . - . ID=gene-C9E93_RS02075;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9E93_RS02075;old_locus_tag=C9E93_02160 NZ_PYJV01000017.1 Protein Homology CDS 36419 37816 . - 0 ID=cds-WP_000404876.1;Parent=gene-C9E93_RS02075;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9E93_RS02075;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 38179 39243 . + . ID=gene-C9E93_RS02080;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=C9E93_RS02080;old_locus_tag=C9E93_02165 NZ_PYJV01000017.1 Protein Homology CDS 38179 39243 . + 0 ID=cds-WP_000049161.1;Parent=gene-C9E93_RS02080;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9E93_RS02080;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 39348 40103 . + . ID=gene-C9E93_RS02085;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9E93_RS02085;old_locus_tag=C9E93_02170 NZ_PYJV01000017.1 Protein Homology CDS 39348 40103 . + 0 ID=cds-WP_000133618.1;Parent=gene-C9E93_RS02085;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9E93_RS02085;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 40100 40849 . - . ID=gene-C9E93_RS02090;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9E93_RS02090;old_locus_tag=C9E93_02175 NZ_PYJV01000017.1 Protein Homology CDS 40100 40849 . - 0 ID=cds-WP_000560303.1;Parent=gene-C9E93_RS02090;Dbxref=GenBank:WP_000560303.1;Name=WP_000560303.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9E93_RS02090;product=esterase;protein_id=WP_000560303.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 41033 41362 . + . ID=gene-C9E93_RS02095;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9E93_RS02095;old_locus_tag=C9E93_02180 NZ_PYJV01000017.1 Protein Homology CDS 41033 41362 . + 0 ID=cds-WP_080169957.1;Parent=gene-C9E93_RS02095;Dbxref=GenBank:WP_080169957.1;Name=WP_080169957.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9E93_RS02095;product=biofilm peroxide resistance protein BsmA;protein_id=WP_080169957.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 41493 41768 . + . ID=gene-C9E93_RS02100;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9E93_RS02100;old_locus_tag=C9E93_02185 NZ_PYJV01000017.1 Protein Homology CDS 41493 41768 . + 0 ID=cds-WP_001518964.1;Parent=gene-C9E93_RS02100;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9E93_RS02100;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 41813 43435 . - . ID=gene-C9E93_RS02105;Name=C9E93_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02105;old_locus_tag=C9E93_02190 NZ_PYJV01000017.1 Protein Homology CDS 41813 43435 . - 0 ID=cds-WP_000118979.1;Parent=gene-C9E93_RS02105;Dbxref=GenBank:WP_000118979.1;Name=WP_000118979.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9E93_RS02105;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118979.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 43520 44683 . - . ID=gene-C9E93_RS02110;Name=C9E93_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02110;old_locus_tag=C9E93_02195 NZ_PYJV01000017.1 Protein Homology CDS 43520 44683 . - 0 ID=cds-WP_000943948.1;Parent=gene-C9E93_RS02110;Dbxref=GenBank:WP_000943948.1;Name=WP_000943948.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9E93_RS02110;product=glutathionylspermidine synthase family protein;protein_id=WP_000943948.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 44686 45324 . - . ID=gene-C9E93_RS02115;Name=C9E93_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02115;old_locus_tag=C9E93_02200 NZ_PYJV01000017.1 Protein Homology CDS 44686 45324 . - 0 ID=cds-WP_135370317.1;Parent=gene-C9E93_RS02115;Dbxref=GenBank:WP_135370317.1;Name=WP_135370317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9E93_RS02115;product=DUF1190 domain-containing protein;protein_id=WP_135370317.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 45334 45732 . - . ID=gene-C9E93_RS02120;Name=C9E93_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02120;old_locus_tag=C9E93_02205 NZ_PYJV01000017.1 Protein Homology CDS 45334 45732 . - 0 ID=cds-WP_000547737.1;Parent=gene-C9E93_RS02120;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9E93_RS02120;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 45750 46433 . - . ID=gene-C9E93_RS02125;Name=C9E93_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02125;old_locus_tag=C9E93_02210 NZ_PYJV01000017.1 Protein Homology CDS 45750 46433 . - 0 ID=cds-WP_000090294.1;Parent=gene-C9E93_RS02125;Dbxref=GenBank:WP_000090294.1;Name=WP_000090294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9E93_RS02125;product=YjfK family protein;protein_id=WP_000090294.1;transl_table=11 NZ_PYJV01000017.1 RefSeq pseudogene 46556 46657 . - . ID=gene-C9E93_RS23820;Name=C9E93_RS23820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23820;partial=true;pseudo=true;start_range=.,46556 NZ_PYJV01000017.1 Protein Homology CDS 46556 46657 . - 0 ID=cds-C9E93_RS23820;Parent=gene-C9E93_RS23820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9E93_RS23820;partial=true;product=hypothetical protein;pseudo=true;start_range=.,46556;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 46657 47355 . - . ID=gene-C9E93_RS02130;Name=C9E93_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02130;old_locus_tag=C9E93_02215 NZ_PYJV01000017.1 Protein Homology CDS 46657 47355 . - 0 ID=cds-WP_000511981.1;Parent=gene-C9E93_RS02130;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9E93_RS02130;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_PYJV01000017.1 RefSeq gene 47370 47774 . - . ID=gene-C9E93_RS02135;Name=C9E93_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02135;old_locus_tag=C9E93_02220 NZ_PYJV01000017.1 Protein Homology CDS 47370 47774 . - 0 ID=cds-WP_000312605.1;Parent=gene-C9E93_RS02135;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9E93_RS02135;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 ##sequence-region NZ_PYJV01000085.1 1 130659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000085.1 RefSeq region 1 130659 . + . ID=NZ_PYJV01000085.1:1..130659;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000085.1 RefSeq gene 99 173 . + . ID=gene-C9E93_RS14920;Name=C9E93_RS14920;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS14920;old_locus_tag=C9E93_15300 NZ_PYJV01000085.1 tRNAscan-SE tRNA 99 173 . + . ID=rna-C9E93_RS14920;Parent=gene-C9E93_RS14920;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14920;product=tRNA-Gln NZ_PYJV01000085.1 tRNAscan-SE exon 99 173 . + . ID=exon-C9E93_RS14920-1;Parent=rna-C9E93_RS14920;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14920;product=tRNA-Gln NZ_PYJV01000085.1 RefSeq gene 304 1479 . - . ID=gene-C9E93_RS14925;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=C9E93_RS14925;old_locus_tag=C9E93_15305 NZ_PYJV01000085.1 Protein Homology CDS 304 1479 . - 0 ID=cds-WP_135369968.1;Parent=gene-C9E93_RS14925;Dbxref=GenBank:WP_135369968.1;Name=WP_135369968.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9E93_RS14925;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_135369968.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 1623 3047 . + . ID=gene-C9E93_RS14930;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9E93_RS14930;old_locus_tag=C9E93_15310 NZ_PYJV01000085.1 Protein Homology CDS 1623 3047 . + 0 ID=cds-WP_001519200.1;Parent=gene-C9E93_RS14930;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9E93_RS14930;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 3252 4298 . + . ID=gene-C9E93_RS14935;Name=C9E93_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14935;old_locus_tag=C9E93_15315 NZ_PYJV01000085.1 Protein Homology CDS 3252 4298 . + 0 ID=cds-WP_001018045.1;Parent=gene-C9E93_RS14935;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9E93_RS14935;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 4295 4768 . + . ID=gene-C9E93_RS14940;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9E93_RS14940;old_locus_tag=C9E93_15320 NZ_PYJV01000085.1 Protein Homology CDS 4295 4768 . + 0 ID=cds-WP_000084477.1;Parent=gene-C9E93_RS14940;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9E93_RS14940;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 4926 5804 . + . ID=gene-C9E93_RS14945;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9E93_RS14945;old_locus_tag=C9E93_15325 NZ_PYJV01000085.1 Protein Homology CDS 4926 5804 . + 0 ID=cds-WP_001278615.1;Parent=gene-C9E93_RS14945;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9E93_RS14945;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 5824 7362 . + . ID=gene-C9E93_RS14950;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9E93_RS14950;old_locus_tag=C9E93_15330 NZ_PYJV01000085.1 Protein Homology CDS 5824 7362 . + 0 ID=cds-WP_076936424.1;Parent=gene-C9E93_RS14950;Dbxref=GenBank:WP_076936424.1;Name=WP_076936424.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9E93_RS14950;product=apolipoprotein N-acyltransferase;protein_id=WP_076936424.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 7780 8688 . + . ID=gene-C9E93_RS14955;Name=C9E93_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14955;old_locus_tag=C9E93_15335 NZ_PYJV01000085.1 Protein Homology CDS 7780 8688 . + 0 ID=cds-WP_001518176.1;Parent=gene-C9E93_RS14955;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9E93_RS14955;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 8848 9588 . + . ID=gene-C9E93_RS14960;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=C9E93_RS14960;old_locus_tag=C9E93_15340 NZ_PYJV01000085.1 Protein Homology CDS 8848 9588 . + 0 ID=cds-WP_000020930.1;Parent=gene-C9E93_RS14960;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9E93_RS14960;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 9588 10262 . + . ID=gene-C9E93_RS14965;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9E93_RS14965;old_locus_tag=C9E93_15345 NZ_PYJV01000085.1 Protein Homology CDS 9588 10262 . + 0 ID=cds-WP_000272799.1;Parent=gene-C9E93_RS14965;Dbxref=GenBank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9E93_RS14965;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 10262 10987 . + . ID=gene-C9E93_RS14970;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9E93_RS14970;old_locus_tag=C9E93_15350 NZ_PYJV01000085.1 Protein Homology CDS 10262 10987 . + 0 ID=cds-WP_000631369.1;Parent=gene-C9E93_RS14970;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9E93_RS14970;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 11104 12039 . + . ID=gene-C9E93_RS14975;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9E93_RS14975;old_locus_tag=C9E93_15355 NZ_PYJV01000085.1 Protein Homology CDS 11104 12039 . + 0 ID=cds-WP_135369967.1;Parent=gene-C9E93_RS14975;Dbxref=GenBank:WP_135369967.1;Name=WP_135369967.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9E93_RS14975;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_135369967.1;transl_table=11 NZ_PYJV01000085.1 RefSeq pseudogene 12071 13309 . + . ID=gene-C9E93_RS14980;Name=C9E93_RS14980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS14980;old_locus_tag=C9E93_15360;pseudo=true NZ_PYJV01000085.1 Protein Homology CDS 12071 13309 . + 0 ID=cds-C9E93_RS14980;Parent=gene-C9E93_RS14980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9E93_RS14980;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 13385 15064 . + . ID=gene-C9E93_RS14985;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=C9E93_RS14985;old_locus_tag=C9E93_15365 NZ_PYJV01000085.1 Protein Homology CDS 13385 15064 . + 0 ID=cds-WP_135369966.1;Parent=gene-C9E93_RS14985;Dbxref=GenBank:WP_135369966.1;Name=WP_135369966.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9E93_RS14985;product=molecular chaperone HscC;protein_id=WP_135369966.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 15086 16558 . - . ID=gene-C9E93_RS14990;Name=C9E93_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14990;old_locus_tag=C9E93_15370 NZ_PYJV01000085.1 Protein Homology CDS 15086 16558 . - 0 ID=cds-WP_021000065.1;Parent=gene-C9E93_RS14990;Dbxref=GenBank:WP_021000065.1;Name=WP_021000065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9E93_RS14990;product=J domain-containing protein;protein_id=WP_021000065.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 16555 17250 . - . ID=gene-C9E93_RS14995;Name=C9E93_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14995;old_locus_tag=C9E93_15375 NZ_PYJV01000085.1 Protein Homology CDS 16555 17250 . - 0 ID=cds-WP_000356622.1;Parent=gene-C9E93_RS14995;Dbxref=GenBank:WP_000356622.1;Name=WP_000356622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9E93_RS14995;product=DUF1266 domain-containing protein;protein_id=WP_000356622.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 17262 18695 . - . ID=gene-C9E93_RS15000;Name=C9E93_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15000;old_locus_tag=C9E93_15380 NZ_PYJV01000085.1 Protein Homology CDS 17262 18695 . - 0 ID=cds-WP_135369965.1;Parent=gene-C9E93_RS15000;Dbxref=GenBank:WP_135369965.1;Name=WP_135369965.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9E93_RS15000;product=J domain-containing protein;protein_id=WP_135369965.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 18692 19399 . - . ID=gene-C9E93_RS15005;Name=C9E93_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15005;old_locus_tag=C9E93_15385 NZ_PYJV01000085.1 Protein Homology CDS 18692 19399 . - 0 ID=cds-WP_023137867.1;Parent=gene-C9E93_RS15005;Dbxref=GenBank:WP_023137867.1;Name=WP_023137867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9E93_RS15005;product=DUF1266 domain-containing protein;protein_id=WP_023137867.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 19524 20519 . + . ID=gene-C9E93_RS15010;Name=C9E93_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15010;old_locus_tag=C9E93_15390 NZ_PYJV01000085.1 Protein Homology CDS 19524 20519 . + 0 ID=cds-WP_135369964.1;Parent=gene-C9E93_RS15010;Dbxref=GenBank:WP_135369964.1;Name=WP_135369964.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9E93_RS15010;product=tetratricopeptide repeat protein;protein_id=WP_135369964.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 20558 21031 . - . ID=gene-C9E93_RS15015;Name=C9E93_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15015;old_locus_tag=C9E93_15395 NZ_PYJV01000085.1 Protein Homology CDS 20558 21031 . - 0 ID=cds-WP_001044884.1;Parent=gene-C9E93_RS15015;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9E93_RS15015;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 21124 23052 . - . ID=gene-C9E93_RS15020;Name=C9E93_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15020;old_locus_tag=C9E93_15400 NZ_PYJV01000085.1 Protein Homology CDS 21124 23052 . - 0 ID=cds-WP_135369963.1;Parent=gene-C9E93_RS15020;Dbxref=GenBank:WP_135369963.1;Name=WP_135369963.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9E93_RS15020;product=sigma-54 interaction domain-containing protein;protein_id=WP_135369963.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 23120 24073 . - . ID=gene-C9E93_RS15025;Name=C9E93_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15025;old_locus_tag=C9E93_15405 NZ_PYJV01000085.1 Protein Homology CDS 23120 24073 . - 0 ID=cds-WP_000694477.1;Parent=gene-C9E93_RS15025;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9E93_RS15025;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 24123 25295 . - . ID=gene-C9E93_RS15030;Name=C9E93_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15030;old_locus_tag=C9E93_15410 NZ_PYJV01000085.1 Protein Homology CDS 24123 25295 . - 0 ID=cds-WP_001670689.1;Parent=gene-C9E93_RS15030;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9E93_RS15030;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 25312 25653 . - . ID=gene-C9E93_RS15035;Name=C9E93_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15035;old_locus_tag=C9E93_15415 NZ_PYJV01000085.1 Protein Homology CDS 25312 25653 . - 0 ID=cds-WP_001574029.1;Parent=gene-C9E93_RS15035;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9E93_RS15035;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 25890 28472 . + . ID=gene-C9E93_RS15040;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9E93_RS15040;old_locus_tag=C9E93_15420 NZ_PYJV01000085.1 Protein Homology CDS 25890 28472 . + 0 ID=cds-WP_001157916.1;Parent=gene-C9E93_RS15040;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9E93_RS15040;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 28487 29077 . + . ID=gene-C9E93_RS15045;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9E93_RS15045;old_locus_tag=C9E93_15425 NZ_PYJV01000085.1 Protein Homology CDS 28487 29077 . + 0 ID=cds-WP_001269950.1;Parent=gene-C9E93_RS15045;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9E93_RS15045;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 29077 30108 . + . ID=gene-C9E93_RS15050;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9E93_RS15050;old_locus_tag=C9E93_15430 NZ_PYJV01000085.1 Protein Homology CDS 29077 30108 . + 0 ID=cds-WP_000620491.1;Parent=gene-C9E93_RS15050;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9E93_RS15050;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 30110 30751 . + . ID=gene-C9E93_RS15055;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9E93_RS15055;old_locus_tag=C9E93_15435 NZ_PYJV01000085.1 Protein Homology CDS 30110 30751 . + 0 ID=cds-WP_001518902.1;Parent=gene-C9E93_RS15055;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9E93_RS15055;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 30726 31820 . - . ID=gene-C9E93_RS15060;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9E93_RS15060;old_locus_tag=C9E93_15440 NZ_PYJV01000085.1 Protein Homology CDS 30726 31820 . - 0 ID=cds-WP_135369962.1;Parent=gene-C9E93_RS15060;Dbxref=GenBank:WP_135369962.1;Name=WP_135369962.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9E93_RS15060;product=threonine-phosphate decarboxylase CobD;protein_id=WP_135369962.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 31917 32525 . + . ID=gene-C9E93_RS15065;Name=C9E93_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15065;old_locus_tag=C9E93_15445 NZ_PYJV01000085.1 Protein Homology CDS 31917 32525 . + 0 ID=cds-WP_001523290.1;Parent=gene-C9E93_RS15065;Dbxref=GenBank:WP_001523290.1;Name=WP_001523290.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9E93_RS15065;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001523290.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 32854 33171 . + . ID=gene-C9E93_RS15070;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9E93_RS15070;old_locus_tag=C9E93_15450 NZ_PYJV01000085.1 Protein Homology CDS 32854 33171 . + 0 ID=cds-WP_001161670.1;Parent=gene-C9E93_RS15070;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9E93_RS15070;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 33175 33642 . + . ID=gene-C9E93_RS15075;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=C9E93_RS15075;old_locus_tag=C9E93_15455 NZ_PYJV01000085.1 Protein Homology CDS 33175 33642 . + 0 ID=cds-WP_000776107.1;Parent=gene-C9E93_RS15075;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9E93_RS15075;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 33673 35574 . + . ID=gene-C9E93_RS15080;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E93_RS15080;old_locus_tag=C9E93_15460 NZ_PYJV01000085.1 Protein Homology CDS 33673 35574 . + 0 ID=cds-WP_000828700.1;Parent=gene-C9E93_RS15080;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9E93_RS15080;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 35577 36689 . + . ID=gene-C9E93_RS15085;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9E93_RS15085;old_locus_tag=C9E93_15465 NZ_PYJV01000085.1 Protein Homology CDS 35577 36689 . + 0 ID=cds-WP_000131713.1;Parent=gene-C9E93_RS15085;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9E93_RS15085;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 36700 37833 . + . ID=gene-C9E93_RS15090;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9E93_RS15090;old_locus_tag=C9E93_15470 NZ_PYJV01000085.1 Protein Homology CDS 36700 37833 . + 0 ID=cds-WP_023258554.1;Parent=gene-C9E93_RS15090;Dbxref=GenBank:WP_023258554.1;Name=WP_023258554.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9E93_RS15090;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_023258554.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 37973 39184 . + . ID=gene-C9E93_RS15095;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9E93_RS15095;old_locus_tag=C9E93_15475 NZ_PYJV01000085.1 Protein Homology CDS 37973 39184 . + 0 ID=cds-WP_000858711.1;Parent=gene-C9E93_RS15095;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9E93_RS15095;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 39293 39556 . + . ID=gene-C9E93_RS15100;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9E93_RS15100;old_locus_tag=C9E93_15480 NZ_PYJV01000085.1 Protein Homology CDS 39293 39556 . + 0 ID=cds-WP_000850547.1;Parent=gene-C9E93_RS15100;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9E93_RS15100;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 39656 40297 . + . ID=gene-C9E93_RS15105;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9E93_RS15105;old_locus_tag=C9E93_15485 NZ_PYJV01000085.1 Protein Homology CDS 39656 40297 . + 0 ID=cds-WP_135369961.1;Parent=gene-C9E93_RS15105;Dbxref=GenBank:WP_135369961.1;Name=WP_135369961.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9E93_RS15105;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_135369961.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 40599 41552 . + . ID=gene-C9E93_RS15110;Name=C9E93_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15110;old_locus_tag=C9E93_15490 NZ_PYJV01000085.1 Protein Homology CDS 40599 41552 . + 0 ID=cds-WP_001282817.1;Parent=gene-C9E93_RS15110;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9E93_RS15110;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 41758 42723 . + . ID=gene-C9E93_RS15115;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9E93_RS15115;old_locus_tag=C9E93_15495 NZ_PYJV01000085.1 Protein Homology CDS 41758 42723 . + 0 ID=cds-WP_000042640.1;Parent=gene-C9E93_RS15115;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9E93_RS15115;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 42809 43012 . - . ID=gene-C9E93_RS15120;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9E93_RS15120;old_locus_tag=C9E93_15500 NZ_PYJV01000085.1 Protein Homology CDS 42809 43012 . - 0 ID=cds-WP_000503938.1;Parent=gene-C9E93_RS15120;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9E93_RS15120;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 43141 43929 . - . ID=gene-C9E93_RS15125;Name=C9E93_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15125;old_locus_tag=C9E93_15505 NZ_PYJV01000085.1 Protein Homology CDS 43141 43929 . - 0 ID=cds-WP_135369960.1;Parent=gene-C9E93_RS15125;Dbxref=GenBank:WP_135369960.1;Name=WP_135369960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9E93_RS15125;product=deaminated glutathione amidase;protein_id=WP_135369960.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 44020 44403 . + . ID=gene-C9E93_RS15130;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9E93_RS15130;old_locus_tag=C9E93_15510 NZ_PYJV01000085.1 Protein Homology CDS 44020 44403 . + 0 ID=cds-WP_000939753.1;Parent=gene-C9E93_RS15130;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9E93_RS15130;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 44461 44670 . - . ID=gene-C9E93_RS15135;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E93_RS15135;old_locus_tag=C9E93_15515 NZ_PYJV01000085.1 Protein Homology CDS 44461 44670 . - 0 ID=cds-WP_000034826.1;Parent=gene-C9E93_RS15135;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=C9E93_RS15135;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 44858 45430 . - . ID=gene-C9E93_RS15140;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9E93_RS15140;old_locus_tag=C9E93_15520 NZ_PYJV01000085.1 Protein Homology CDS 44858 45430 . - 0 ID=cds-WP_001637197.1;Parent=gene-C9E93_RS15140;Dbxref=GenBank:WP_001637197.1;Name=WP_001637197.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9E93_RS15140;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001637197.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 45807 47192 . + . ID=gene-C9E93_RS15145;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9E93_RS15145;old_locus_tag=C9E93_15525 NZ_PYJV01000085.1 Protein Homology CDS 45807 47192 . + 0 ID=cds-WP_135369959.1;Parent=gene-C9E93_RS15145;Dbxref=GenBank:WP_135369959.1;Name=WP_135369959.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958620.1;locus_tag=C9E93_RS15145;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_135369959.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 47246 47926 . - . ID=gene-C9E93_RS15150;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9E93_RS15150;old_locus_tag=C9E93_15530 NZ_PYJV01000085.1 Protein Homology CDS 47246 47926 . - 0 ID=cds-WP_000138786.1;Parent=gene-C9E93_RS15150;Dbxref=GenBank:WP_000138786.1;Name=WP_000138786.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9E93_RS15150;product=two-component response regulator DpiA;protein_id=WP_000138786.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 47895 49556 . - . ID=gene-C9E93_RS15155;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9E93_RS15155;old_locus_tag=C9E93_15535 NZ_PYJV01000085.1 Protein Homology CDS 47895 49556 . - 0 ID=cds-WP_023228680.1;Parent=gene-C9E93_RS15155;Dbxref=GenBank:WP_023228680.1;Name=WP_023228680.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9E93_RS15155;product=sensor histidine kinase DpiB;protein_id=WP_023228680.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 49941 51017 . + . ID=gene-C9E93_RS15160;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E93_RS15160;old_locus_tag=C9E93_15545 NZ_PYJV01000085.1 Protein Homology CDS 49941 51017 . + 0 ID=cds-WP_000467874.1;Parent=gene-C9E93_RS15160;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9E93_RS15160;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 51014 51310 . + . ID=gene-C9E93_RS15165;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E93_RS15165;old_locus_tag=C9E93_15550 NZ_PYJV01000085.1 Protein Homology CDS 51014 51310 . + 0 ID=cds-WP_000700679.1;Parent=gene-C9E93_RS15165;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9E93_RS15165;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 51307 52215 . + . ID=gene-C9E93_RS15170;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E93_RS15170;old_locus_tag=C9E93_15555 NZ_PYJV01000085.1 Protein Homology CDS 51307 52215 . + 0 ID=cds-WP_000622342.1;Parent=gene-C9E93_RS15170;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9E93_RS15170;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 52225 53754 . + . ID=gene-C9E93_RS15175;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E93_RS15175;old_locus_tag=C9E93_15560 NZ_PYJV01000085.1 Protein Homology CDS 52225 53754 . + 0 ID=cds-WP_023258281.1;Parent=gene-C9E93_RS15175;Dbxref=GenBank:WP_023258281.1;Name=WP_023258281.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9E93_RS15175;product=citrate lyase subunit alpha;protein_id=WP_023258281.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 53758 54309 . + . ID=gene-C9E93_RS15180;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E93_RS15180;old_locus_tag=C9E93_15565 NZ_PYJV01000085.1 Protein Homology CDS 53758 54309 . + 0 ID=cds-WP_135369958.1;Parent=gene-C9E93_RS15180;Dbxref=GenBank:WP_135369958.1;Name=WP_135369958.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9E93_RS15180;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369958.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 54281 55177 . + . ID=gene-C9E93_RS15185;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E93_RS15185;old_locus_tag=C9E93_15570 NZ_PYJV01000085.1 Protein Homology CDS 54281 55177 . + 0 ID=cds-WP_000982655.1;Parent=gene-C9E93_RS15185;Dbxref=GenBank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9E93_RS15185;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 55215 56678 . + . ID=gene-C9E93_RS15190;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9E93_RS15190;old_locus_tag=C9E93_15575 NZ_PYJV01000085.1 Protein Homology CDS 55215 56678 . + 0 ID=cds-WP_000059029.1;Parent=gene-C9E93_RS15190;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9E93_RS15190;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 56788 57594 . + . ID=gene-C9E93_RS15195;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=C9E93_RS15195;old_locus_tag=C9E93_15580 NZ_PYJV01000085.1 Protein Homology CDS 56788 57594 . + 0 ID=cds-WP_135369957.1;Parent=gene-C9E93_RS15195;Dbxref=GenBank:WP_135369957.1;Name=WP_135369957.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9E93_RS15195;product=ribonuclease I;protein_id=WP_135369957.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 57829 58239 . + . ID=gene-C9E93_RS15200;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9E93_RS15200;old_locus_tag=C9E93_15590 NZ_PYJV01000085.1 Protein Homology CDS 57829 58239 . + 0 ID=cds-WP_000089748.1;Parent=gene-C9E93_RS15200;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9E93_RS15200;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 58322 59560 . - . ID=gene-C9E93_RS15205;Name=C9E93_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15205;old_locus_tag=C9E93_15595 NZ_PYJV01000085.1 Protein Homology CDS 58322 59560 . - 0 ID=cds-WP_000646115.1;Parent=gene-C9E93_RS15205;Dbxref=GenBank:WP_000646115.1;Name=WP_000646115.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9E93_RS15205;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646115.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 59783 60211 . + . ID=gene-C9E93_RS15210;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9E93_RS15210;old_locus_tag=C9E93_15600 NZ_PYJV01000085.1 Protein Homology CDS 59783 60211 . + 0 ID=cds-WP_000278499.1;Parent=gene-C9E93_RS15210;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9E93_RS15210;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 60279 61046 . - . ID=gene-C9E93_RS15215;Name=C9E93_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15215;old_locus_tag=C9E93_15605 NZ_PYJV01000085.1 Protein Homology CDS 60279 61046 . - 0 ID=cds-WP_135369955.1;Parent=gene-C9E93_RS15215;Dbxref=GenBank:WP_135369955.1;Name=WP_135369955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9E93_RS15215;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369955.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 61046 61603 . - . ID=gene-C9E93_RS15220;Name=C9E93_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15220;old_locus_tag=C9E93_15610 NZ_PYJV01000085.1 Protein Homology CDS 61046 61603 . - 0 ID=cds-WP_001250381.1;Parent=gene-C9E93_RS15220;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9E93_RS15220;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 61600 63879 . - . ID=gene-C9E93_RS15225;Name=C9E93_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15225;old_locus_tag=C9E93_15615 NZ_PYJV01000085.1 Protein Homology CDS 61600 63879 . - 0 ID=cds-WP_135369954.1;Parent=gene-C9E93_RS15225;Dbxref=GenBank:WP_135369954.1;Name=WP_135369954.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9E93_RS15225;product=molybdopterin-dependent oxidoreductase;protein_id=WP_135369954.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 63872 64432 . - . ID=gene-C9E93_RS15230;Name=C9E93_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15230;old_locus_tag=C9E93_15620 NZ_PYJV01000085.1 Protein Homology CDS 63872 64432 . - 0 ID=cds-WP_000377444.1;Parent=gene-C9E93_RS15230;Dbxref=GenBank:WP_000377444.1;Name=WP_000377444.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9E93_RS15230;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377444.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 64765 66330 . - . ID=gene-C9E93_RS15235;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9E93_RS15235;old_locus_tag=C9E93_15625 NZ_PYJV01000085.1 Protein Homology CDS 64765 66330 . - 0 ID=cds-WP_000887644.1;Parent=gene-C9E93_RS15235;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9E93_RS15235;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 66572 67135 . - . ID=gene-C9E93_RS15240;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9E93_RS15240;old_locus_tag=C9E93_15630 NZ_PYJV01000085.1 Protein Homology CDS 66572 67135 . - 0 ID=cds-WP_000052802.1;Parent=gene-C9E93_RS15240;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9E93_RS15240;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 67576 68322 . + . ID=gene-C9E93_RS15245;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9E93_RS15245;old_locus_tag=C9E93_15635 NZ_PYJV01000085.1 Protein Homology CDS 67576 68322 . + 0 ID=cds-WP_000597122.1;Parent=gene-C9E93_RS15245;Dbxref=GenBank:WP_000597122.1;Name=WP_000597122.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9E93_RS15245;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597122.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 68639 69541 . + . ID=gene-C9E93_RS15250;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=C9E93_RS15250;old_locus_tag=C9E93_15645 NZ_PYJV01000085.1 Protein Homology CDS 68639 69541 . + 0 ID=cds-WP_000002497.1;Parent=gene-C9E93_RS15250;Dbxref=GenBank:WP_000002497.1;Name=WP_000002497.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9E93_RS15250;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002497.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 69707 70942 . + . ID=gene-C9E93_RS15255;Name=C9E93_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15255;old_locus_tag=C9E93_15650 NZ_PYJV01000085.1 Protein Homology CDS 69707 70942 . + 0 ID=cds-WP_000118139.1;Parent=gene-C9E93_RS15255;Dbxref=GenBank:WP_000118139.1;Name=WP_000118139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9E93_RS15255;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118139.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 70915 71532 . + . ID=gene-C9E93_RS15260;Name=C9E93_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15260;old_locus_tag=C9E93_15655 NZ_PYJV01000085.1 Protein Homology CDS 70915 71532 . + 0 ID=cds-WP_001164756.1;Parent=gene-C9E93_RS15260;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9E93_RS15260;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 71533 72693 . - . ID=gene-C9E93_RS15265;Name=C9E93_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15265;old_locus_tag=C9E93_15660 NZ_PYJV01000085.1 Protein Homology CDS 71533 72693 . - 0 ID=cds-WP_001245592.1;Parent=gene-C9E93_RS15265;Dbxref=GenBank:WP_001245592.1;Name=WP_001245592.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9E93_RS15265;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245592.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 72820 73908 . + . ID=gene-C9E93_RS15270;Name=C9E93_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15270;old_locus_tag=C9E93_15665 NZ_PYJV01000085.1 Protein Homology CDS 72820 73908 . + 0 ID=cds-WP_023238689.1;Parent=gene-C9E93_RS15270;Dbxref=GenBank:WP_023238689.1;Name=WP_023238689.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9E93_RS15270;product=oxidoreductase;protein_id=WP_023238689.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 73944 74141 . - . ID=gene-C9E93_RS15275;Name=C9E93_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15275;old_locus_tag=C9E93_15670 NZ_PYJV01000085.1 Protein Homology CDS 73944 74141 . - 0 ID=cds-WP_000460619.1;Parent=gene-C9E93_RS15275;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9E93_RS15275;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 74205 76310 . - . ID=gene-C9E93_RS15280;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9E93_RS15280;old_locus_tag=C9E93_15675 NZ_PYJV01000085.1 Protein Homology CDS 74205 76310 . - 0 ID=cds-WP_135370368.1;Parent=gene-C9E93_RS15280;Dbxref=GenBank:WP_135370368.1;Name=WP_135370368.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9E93_RS15280;product=pyruvate/proton symporter CstA;protein_id=WP_135370368.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 76492 76905 . - . ID=gene-C9E93_RS15285;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9E93_RS15285;old_locus_tag=C9E93_15680 NZ_PYJV01000085.1 Protein Homology CDS 76492 76905 . - 0 ID=cds-WP_000637966.1;Parent=gene-C9E93_RS15285;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9E93_RS15285;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 76908 77663 . - . ID=gene-C9E93_RS15290;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9E93_RS15290;old_locus_tag=C9E93_15685 NZ_PYJV01000085.1 Protein Homology CDS 76908 77663 . - 0 ID=cds-WP_135370367.1;Parent=gene-C9E93_RS15290;Dbxref=GenBank:WP_135370367.1;Name=WP_135370367.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9E93_RS15290;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_135370367.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 77663 78520 . - . ID=gene-C9E93_RS15295;Name=C9E93_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15295;old_locus_tag=C9E93_15690 NZ_PYJV01000085.1 Protein Homology CDS 77663 78520 . - 0 ID=cds-WP_001007166.1;Parent=gene-C9E93_RS15295;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9E93_RS15295;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 78534 80144 . - . ID=gene-C9E93_RS15300;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9E93_RS15300;old_locus_tag=C9E93_15695 NZ_PYJV01000085.1 Protein Homology CDS 78534 80144 . - 0 ID=cds-WP_023182270.1;Parent=gene-C9E93_RS15300;Dbxref=GenBank:WP_023182270.1;Name=WP_023182270.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9E93_RS15300;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_023182270.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 80154 81329 . - . ID=gene-C9E93_RS15305;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=C9E93_RS15305;old_locus_tag=C9E93_15700 NZ_PYJV01000085.1 Protein Homology CDS 80154 81329 . - 0 ID=cds-WP_000367601.1;Parent=gene-C9E93_RS15305;Dbxref=GenBank:WP_000367601.1;Name=WP_000367601.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9E93_RS15305;product=isochorismate synthase EntC;protein_id=WP_000367601.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 81638 82594 . + . ID=gene-C9E93_RS15310;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9E93_RS15310;old_locus_tag=C9E93_15705 NZ_PYJV01000085.1 Protein Homology CDS 81638 82594 . + 0 ID=cds-WP_001238992.1;Parent=gene-C9E93_RS15310;Dbxref=GenBank:WP_001238992.1;Name=WP_001238992.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9E93_RS15310;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238992.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 82657 83901 . - . ID=gene-C9E93_RS15315;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9E93_RS15315;old_locus_tag=C9E93_15710 NZ_PYJV01000085.1 Protein Homology CDS 82657 83901 . - 0 ID=cds-WP_001081663.1;Parent=gene-C9E93_RS15315;Dbxref=GenBank:WP_001081663.1;Name=WP_001081663.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9E93_RS15315;product=enterobactin transporter EntS;protein_id=WP_001081663.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 84012 85019 . + . ID=gene-C9E93_RS15320;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9E93_RS15320;old_locus_tag=C9E93_15715 NZ_PYJV01000085.1 Protein Homology CDS 84012 85019 . + 0 ID=cds-WP_001277879.1;Parent=gene-C9E93_RS15320;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9E93_RS15320;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 85019 86008 . + . ID=gene-C9E93_RS15325;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9E93_RS15325;old_locus_tag=C9E93_15720 NZ_PYJV01000085.1 Protein Homology CDS 85019 86008 . + 0 ID=cds-WP_000480055.1;Parent=gene-C9E93_RS15325;Dbxref=GenBank:WP_000480055.1;Name=WP_000480055.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9E93_RS15325;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480055.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 86005 86799 . + . ID=gene-C9E93_RS15330;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9E93_RS15330;old_locus_tag=C9E93_15725 NZ_PYJV01000085.1 Protein Homology CDS 86005 86799 . + 0 ID=cds-WP_127172957.1;Parent=gene-C9E93_RS15330;Dbxref=GenBank:WP_127172957.1;Name=WP_127172957.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9E93_RS15330;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_127172957.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 86853 87989 . - . ID=gene-C9E93_RS15335;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9E93_RS15335;old_locus_tag=C9E93_15730 NZ_PYJV01000085.1 Protein Homology CDS 86853 87989 . - 0 ID=cds-WP_001139585.1;Parent=gene-C9E93_RS15335;Dbxref=GenBank:WP_001139585.1;Name=WP_001139585.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9E93_RS15335;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139585.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 88239 92123 . - . ID=gene-C9E93_RS15340;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9E93_RS15340;old_locus_tag=C9E93_15735 NZ_PYJV01000085.1 Protein Homology CDS 88239 92123 . - 0 ID=cds-WP_135370366.1;Parent=gene-C9E93_RS15340;Dbxref=GenBank:WP_135370366.1;Name=WP_135370366.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9E93_RS15340;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_135370366.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 92120 92338 . - . ID=gene-C9E93_RS15345;Name=C9E93_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15345;old_locus_tag=C9E93_15740 NZ_PYJV01000085.1 Protein Homology CDS 92120 92338 . - 0 ID=cds-WP_000396006.1;Parent=gene-C9E93_RS15345;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9E93_RS15345;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 92369 93583 . - . ID=gene-C9E93_RS15350;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9E93_RS15350;old_locus_tag=C9E93_15745 NZ_PYJV01000085.1 Protein Homology CDS 92369 93583 . - 0 ID=cds-WP_135370370.1;Parent=gene-C9E93_RS15350;Dbxref=GenBank:WP_135370370.1;Name=WP_135370370.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9E93_RS15350;product=enterochelin esterase;protein_id=WP_135370370.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 93772 96027 . + . ID=gene-C9E93_RS15355;Name=C9E93_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15355;old_locus_tag=C9E93_15750 NZ_PYJV01000085.1 Protein Homology CDS 93772 96027 . + 0 ID=cds-WP_001539399.1;Parent=gene-C9E93_RS15355;Dbxref=GenBank:WP_001539399.1;Name=WP_001539399.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9E93_RS15355;product=TonB-dependent siderophore receptor;protein_id=WP_001539399.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 96073 96777 . + . ID=gene-C9E93_RS15360;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9E93_RS15360;old_locus_tag=C9E93_15755 NZ_PYJV01000085.1 Protein Homology CDS 96073 96777 . + 0 ID=cds-WP_135370138.1;Parent=gene-C9E93_RS15360;Dbxref=GenBank:WP_135370138.1;Name=WP_135370138.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9E93_RS15360;product=enterobactin synthase subunit EntD;protein_id=WP_135370138.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 96789 97907 . + . ID=gene-C9E93_RS15365;Name=C9E93_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15365;old_locus_tag=C9E93_15760 NZ_PYJV01000085.1 Protein Homology CDS 96789 97907 . + 0 ID=cds-WP_001196910.1;Parent=gene-C9E93_RS15365;Dbxref=GenBank:WP_001196910.1;Name=WP_001196910.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9E93_RS15365;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196910.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 97974 98222 . + . ID=gene-C9E93_RS15370;Name=C9E93_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15370;old_locus_tag=C9E93_15765 NZ_PYJV01000085.1 Protein Homology CDS 97974 98222 . + 0 ID=cds-WP_000682497.1;Parent=gene-C9E93_RS15370;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9E93_RS15370;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 98228 98569 . - . ID=gene-C9E93_RS15375;Name=C9E93_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15375;old_locus_tag=C9E93_15770 NZ_PYJV01000085.1 Protein Homology CDS 98228 98569 . - 0 ID=cds-WP_000155631.1;Parent=gene-C9E93_RS15375;Dbxref=GenBank:WP_000155631.1;Name=WP_000155631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9E93_RS15375;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155631.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 98858 99439 . + . ID=gene-C9E93_RS15380;Name=C9E93_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15380;old_locus_tag=C9E93_15775 NZ_PYJV01000085.1 Protein Homology CDS 98858 99439 . + 0 ID=cds-WP_000113609.1;Parent=gene-C9E93_RS15380;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9E93_RS15380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 99439 99807 . + . ID=gene-C9E93_RS15385;Name=C9E93_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15385;old_locus_tag=C9E93_15780 NZ_PYJV01000085.1 Protein Homology CDS 99439 99807 . + 0 ID=cds-WP_135370139.1;Parent=gene-C9E93_RS15385;Dbxref=GenBank:WP_135370139.1;Name=WP_135370139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9E93_RS15385;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_135370139.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 99904 100557 . + . ID=gene-C9E93_RS15390;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9E93_RS15390;old_locus_tag=C9E93_15785 NZ_PYJV01000085.1 Protein Homology CDS 99904 100557 . + 0 ID=cds-WP_001529050.1;Parent=gene-C9E93_RS15390;Dbxref=GenBank:WP_001529050.1;Name=WP_001529050.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9E93_RS15390;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_001529050.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 100757 101206 . + . ID=gene-C9E93_RS15395;Name=C9E93_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15395;old_locus_tag=C9E93_15790 NZ_PYJV01000085.1 Protein Homology CDS 100757 101206 . + 0 ID=cds-WP_001216659.1;Parent=gene-C9E93_RS15395;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=C9E93_RS15395;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 101184 101654 . + . ID=gene-C9E93_RS15400;Name=C9E93_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15400;old_locus_tag=C9E93_15795 NZ_PYJV01000085.1 Protein Homology CDS 101184 101654 . + 0 ID=cds-WP_000594177.1;Parent=gene-C9E93_RS15400;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=C9E93_RS15400;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 101669 102412 . + . ID=gene-C9E93_RS15405;Name=C9E93_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15405;old_locus_tag=C9E93_15800 NZ_PYJV01000085.1 Protein Homology CDS 101669 102412 . + 0 ID=cds-WP_000927522.1;Parent=gene-C9E93_RS15405;Dbxref=GenBank:WP_000927522.1;Name=WP_000927522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=C9E93_RS15405;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927522.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 102415 103269 . + . ID=gene-C9E93_RS15410;Name=C9E93_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15410;old_locus_tag=C9E93_15805 NZ_PYJV01000085.1 Protein Homology CDS 102415 103269 . + 0 ID=cds-WP_000005802.1;Parent=gene-C9E93_RS15410;Dbxref=GenBank:WP_000005802.1;Name=WP_000005802.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=C9E93_RS15410;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000005802.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 103302 104345 . + . ID=gene-C9E93_RS15415;Name=C9E93_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15415;old_locus_tag=C9E93_15810 NZ_PYJV01000085.1 Protein Homology CDS 103302 104345 . + 0 ID=cds-WP_023139453.1;Parent=gene-C9E93_RS15415;Dbxref=GenBank:WP_023139453.1;Name=WP_023139453.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9E93_RS15415;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_023139453.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 104412 105398 . + . ID=gene-C9E93_RS15420;Name=C9E93_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15420;old_locus_tag=C9E93_15815 NZ_PYJV01000085.1 Protein Homology CDS 104412 105398 . + 0 ID=cds-WP_000109360.1;Parent=gene-C9E93_RS15420;Dbxref=GenBank:WP_000109360.1;Name=WP_000109360.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=C9E93_RS15420;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 105526 108255 . - . ID=gene-C9E93_RS15425;Name=C9E93_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15425;old_locus_tag=C9E93_15820 NZ_PYJV01000085.1 Protein Homology CDS 105526 108255 . - 0 ID=cds-WP_001031467.1;Parent=gene-C9E93_RS15425;Dbxref=GenBank:WP_001031467.1;Name=WP_001031467.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9E93_RS15425;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001031467.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 108422 110392 . - . ID=gene-C9E93_RS15430;Name=C9E93_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15430;old_locus_tag=C9E93_15825 NZ_PYJV01000085.1 Protein Homology CDS 108422 110392 . - 0 ID=cds-WP_135370140.1;Parent=gene-C9E93_RS15430;Dbxref=GenBank:WP_135370140.1;Name=WP_135370140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9E93_RS15430;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135370140.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 110703 111950 . + . ID=gene-C9E93_RS15435;Name=C9E93_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15435;old_locus_tag=C9E93_15835 NZ_PYJV01000085.1 Protein Homology CDS 110703 111950 . + 0 ID=cds-WP_001156965.1;Parent=gene-C9E93_RS15435;Dbxref=GenBank:WP_001156965.1;Name=WP_001156965.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9E93_RS15435;product=mechanosensitive ion channel family protein;protein_id=WP_001156965.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 111992 113386 . - . ID=gene-C9E93_RS15440;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=C9E93_RS15440;old_locus_tag=C9E93_15840 NZ_PYJV01000085.1 Protein Homology CDS 111992 113386 . - 0 ID=cds-WP_023993241.1;Parent=gene-C9E93_RS15440;Dbxref=GenBank:WP_023993241.1;Name=WP_023993241.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9E93_RS15440;product=phenylalanine transporter;protein_id=WP_023993241.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 113712 114887 . + . ID=gene-C9E93_RS15445;Name=C9E93_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15445;old_locus_tag=C9E93_15845 NZ_PYJV01000085.1 Protein Homology CDS 113712 114887 . + 0 ID=cds-WP_135370141.1;Parent=gene-C9E93_RS15445;Dbxref=GenBank:WP_135370141.1;Name=WP_135370141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9E93_RS15445;product=DnaJ family molecular chaperone;protein_id=WP_135370141.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 114990 115550 . - . ID=gene-C9E93_RS15450;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9E93_RS15450;old_locus_tag=C9E93_15850 NZ_PYJV01000085.1 Protein Homology CDS 114990 115550 . - 0 ID=cds-WP_000362177.1;Parent=gene-C9E93_RS15450;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9E93_RS15450;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 115563 115799 . - . ID=gene-C9E93_RS15455;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9E93_RS15455;old_locus_tag=C9E93_15855 NZ_PYJV01000085.1 Protein Homology CDS 115563 115799 . - 0 ID=cds-WP_000922170.1;Parent=gene-C9E93_RS15455;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9E93_RS15455;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 115956 117281 . - . ID=gene-C9E93_RS15460;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9E93_RS15460;old_locus_tag=C9E93_15865 NZ_PYJV01000085.1 Protein Homology CDS 115956 117281 . - 0 ID=cds-WP_135370142.1;Parent=gene-C9E93_RS15460;Dbxref=GenBank:WP_135370142.1;Name=WP_135370142.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9E93_RS15460;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_135370142.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 117497 118351 . + . ID=gene-C9E93_RS15465;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9E93_RS15465;old_locus_tag=C9E93_15870 NZ_PYJV01000085.1 Protein Homology CDS 117497 118351 . + 0 ID=cds-WP_135370143.1;Parent=gene-C9E93_RS15465;Dbxref=GenBank:WP_135370143.1;Name=WP_135370143.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9E93_RS15465;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_135370143.1;transl_table=11 NZ_PYJV01000085.1 RefSeq pseudogene 118402 118503 . - . ID=gene-C9E93_RS15470;Name=C9E93_RS15470;end_range=118503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS15470;old_locus_tag=C9E93_15875;partial=true;pseudo=true NZ_PYJV01000085.1 Protein Homology CDS 118402 118503 . - 0 ID=cds-C9E93_RS15470;Parent=gene-C9E93_RS15470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=118503,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=C9E93_RS15470;partial=true;product=cation transporter;pseudo=true;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 119075 120283 . + . ID=gene-C9E93_RS15475;Name=C9E93_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15475;old_locus_tag=C9E93_15880 NZ_PYJV01000085.1 Protein Homology CDS 119075 120283 . + 0 ID=cds-WP_135370388.1;Parent=gene-C9E93_RS15475;Dbxref=GenBank:WP_135370388.1;Name=WP_135370388.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987851.1;locus_tag=C9E93_RS15475;product=tyrosine-type recombinase/integrase;protein_id=WP_135370388.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 120290 120460 . - . ID=gene-C9E93_RS23605;Name=C9E93_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23605 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 120290 120460 . - 0 ID=cds-WP_167851636.1;Parent=gene-C9E93_RS23605;Dbxref=GenBank:WP_167851636.1;Name=WP_167851636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23605;product=hypothetical protein;protein_id=WP_167851636.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 120560 120916 . - . ID=gene-C9E93_RS15480;Name=C9E93_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15480;old_locus_tag=C9E93_15885 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 120560 120916 . - 0 ID=cds-WP_135370387.1;Parent=gene-C9E93_RS15480;Dbxref=GenBank:WP_135370387.1;Name=WP_135370387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15480;product=hypothetical protein;protein_id=WP_135370387.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 121232 121408 . - . ID=gene-C9E93_RS23610;Name=C9E93_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23610 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 121232 121408 . - 0 ID=cds-WP_167851637.1;Parent=gene-C9E93_RS23610;Dbxref=GenBank:WP_167851637.1;Name=WP_167851637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23610;product=hypothetical protein;protein_id=WP_167851637.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 121398 121727 . - . ID=gene-C9E93_RS15490;Name=C9E93_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15490;old_locus_tag=C9E93_15895 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 121398 121727 . - 0 ID=cds-WP_135370385.1;Parent=gene-C9E93_RS15490;Dbxref=GenBank:WP_135370385.1;Name=WP_135370385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15490;product=hypothetical protein;protein_id=WP_135370385.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 121961 122164 . - . ID=gene-C9E93_RS15495;Name=C9E93_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15495;old_locus_tag=C9E93_15900 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 121961 122164 . - 0 ID=cds-WP_135370384.1;Parent=gene-C9E93_RS15495;Dbxref=GenBank:WP_135370384.1;Name=WP_135370384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15495;product=hypothetical protein;protein_id=WP_135370384.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 122161 122475 . - . ID=gene-C9E93_RS15500;Name=C9E93_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15500;old_locus_tag=C9E93_15905 NZ_PYJV01000085.1 Protein Homology CDS 122161 122475 . - 0 ID=cds-WP_135370383.1;Parent=gene-C9E93_RS15500;Dbxref=GenBank:WP_135370383.1;Name=WP_135370383.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024804.6;locus_tag=C9E93_RS15500;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135370383.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 123023 123439 . - . ID=gene-C9E93_RS15505;Name=C9E93_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15505 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 123023 123439 . - 0 ID=cds-WP_135370382.1;Parent=gene-C9E93_RS15505;Dbxref=GenBank:WP_135370382.1;Name=WP_135370382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15505;product=hypothetical protein;protein_id=WP_135370382.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 123393 123845 . - . ID=gene-C9E93_RS15510;Name=C9E93_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15510;old_locus_tag=C9E93_15920 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 123393 123845 . - 0 ID=cds-WP_135370381.1;Parent=gene-C9E93_RS15510;Dbxref=GenBank:WP_135370381.1;Name=WP_135370381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15510;product=hypothetical protein;protein_id=WP_135370381.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 124065 124376 . - . ID=gene-C9E93_RS24090;Name=C9E93_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24090;old_locus_tag=C9E93_15925 NZ_PYJV01000085.1 Protein Homology CDS 124065 124376 . - 0 ID=cds-WP_135370380.1;Parent=gene-C9E93_RS24090;Dbxref=GenBank:WP_135370380.1;Name=WP_135370380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028096.6;locus_tag=C9E93_RS24090;product=Ref family recombination enhancement nuclease;protein_id=WP_135370380.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 124366 124599 . - . ID=gene-C9E93_RS15520;Name=C9E93_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15520;old_locus_tag=C9E93_15930 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 124366 124599 . - 0 ID=cds-WP_135370379.1;Parent=gene-C9E93_RS15520;Dbxref=GenBank:WP_135370379.1;Name=WP_135370379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15520;product=hypothetical protein;protein_id=WP_135370379.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 124677 124853 . - . ID=gene-C9E93_RS23615;Name=C9E93_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23615 NZ_PYJV01000085.1 Protein Homology CDS 124677 124853 . - 0 ID=cds-WP_167851638.1;Parent=gene-C9E93_RS23615;Dbxref=GenBank:WP_167851638.1;Name=WP_167851638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113099.1;locus_tag=C9E93_RS23615;product=hypothetical protein;protein_id=WP_167851638.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 124932 125564 . - . ID=gene-C9E93_RS15525;Name=C9E93_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15525;old_locus_tag=C9E93_15935 NZ_PYJV01000085.1 Protein Homology CDS 124932 125564 . - 0 ID=cds-WP_135370378.1;Parent=gene-C9E93_RS15525;Dbxref=GenBank:WP_135370378.1;Name=WP_135370378.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094050.1;locus_tag=C9E93_RS15525;product=recombinase family protein;protein_id=WP_135370378.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 125746 126156 . - . ID=gene-C9E93_RS15530;Name=C9E93_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15530;old_locus_tag=C9E93_15940 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 125746 126156 . - 0 ID=cds-WP_135370377.1;Parent=gene-C9E93_RS15530;Dbxref=GenBank:WP_135370377.1;Name=WP_135370377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15530;product=hypothetical protein;protein_id=WP_135370377.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 126404 127063 . - . ID=gene-C9E93_RS15535;Name=C9E93_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15535;old_locus_tag=C9E93_15945 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 126404 127063 . - 0 ID=cds-WP_135370376.1;Parent=gene-C9E93_RS15535;Dbxref=GenBank:WP_135370376.1;Name=WP_135370376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15535;product=hypothetical protein;protein_id=WP_135370376.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 127060 128211 . - . ID=gene-C9E93_RS15540;Name=C9E93_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15540;old_locus_tag=C9E93_15950 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 127060 128211 . - 0 ID=cds-WP_135370375.1;Parent=gene-C9E93_RS15540;Dbxref=GenBank:WP_135370375.1;Name=WP_135370375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15540;product=hypothetical protein;protein_id=WP_135370375.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 128793 129605 . - . ID=gene-C9E93_RS15545;Name=C9E93_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15545;old_locus_tag=C9E93_15955 NZ_PYJV01000085.1 Protein Homology CDS 128793 129605 . - 0 ID=cds-WP_135370374.1;Parent=gene-C9E93_RS15545;Dbxref=GenBank:WP_135370374.1;Name=WP_135370374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046467.2;locus_tag=C9E93_RS15545;product=phage baseplate protein;protein_id=WP_135370374.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 129595 129843 . - . ID=gene-C9E93_RS15550;Name=C9E93_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15550;old_locus_tag=C9E93_15960 NZ_PYJV01000085.1 GeneMarkS-2+ CDS 129595 129843 . - 0 ID=cds-WP_023182302.1;Parent=gene-C9E93_RS15550;Dbxref=GenBank:WP_023182302.1;Name=WP_023182302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS15550;product=hypothetical protein;protein_id=WP_023182302.1;transl_table=11 NZ_PYJV01000085.1 RefSeq gene 129830 130438 . - . ID=gene-C9E93_RS15555;Name=C9E93_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15555;old_locus_tag=C9E93_15965 NZ_PYJV01000085.1 Protein Homology CDS 129830 130438 . - 0 ID=cds-WP_135370373.1;Parent=gene-C9E93_RS15555;Dbxref=GenBank:WP_135370373.1;Name=WP_135370373.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049196.2;locus_tag=C9E93_RS15555;product=phage adaptor protein;protein_id=WP_135370373.1;transl_table=11 ##sequence-region NZ_PYJV01000126.1 1 47747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000126.1 RefSeq region 1 47747 . + . ID=NZ_PYJV01000126.1:1..47747;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000126.1 RefSeq gene 1 757 . + . ID=gene-C9E93_RS22815;Name=C9E93_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22815;old_locus_tag=C9E93_23445;partial=true;start_range=.,1 NZ_PYJV01000126.1 Protein Homology CDS 1 757 . + 1 ID=cds-WP_234901049.1;Parent=gene-C9E93_RS22815;Dbxref=GenBank:WP_234901049.1;Name=WP_234901049.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E93_RS22815;partial=true;product=GntR family transcriptional regulator;protein_id=WP_234901049.1;start_range=.,1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 840 1568 . + . ID=gene-C9E93_RS22820;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9E93_RS22820;old_locus_tag=C9E93_23450 NZ_PYJV01000126.1 Protein Homology CDS 840 1568 . + 0 ID=cds-WP_001091009.1;Parent=gene-C9E93_RS22820;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9E93_RS22820;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 1924 4209 . + . ID=gene-C9E93_RS22825;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9E93_RS22825;old_locus_tag=C9E93_23455 NZ_PYJV01000126.1 Protein Homology CDS 1924 4209 . + 0 ID=cds-WP_135370243.1;Parent=gene-C9E93_RS22825;Dbxref=GenBank:WP_135370243.1;Name=WP_135370243.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9E93_RS22825;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_135370243.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 4322 5452 . + . ID=gene-C9E93_RS22830;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9E93_RS22830;old_locus_tag=C9E93_23460 NZ_PYJV01000126.1 Protein Homology CDS 4322 5452 . + 0 ID=cds-WP_000332026.1;Parent=gene-C9E93_RS22830;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9E93_RS22830;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 5452 5706 . + . ID=gene-C9E93_RS22835;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9E93_RS22835;old_locus_tag=C9E93_23465 NZ_PYJV01000126.1 Protein Homology CDS 5452 5706 . + 0 ID=cds-WP_000533921.1;Parent=gene-C9E93_RS22835;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9E93_RS22835;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 5708 6898 . - . ID=gene-C9E93_RS22840;Name=C9E93_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22840;old_locus_tag=C9E93_23470 NZ_PYJV01000126.1 Protein Homology CDS 5708 6898 . - 0 ID=cds-WP_135370242.1;Parent=gene-C9E93_RS22840;Dbxref=GenBank:WP_135370242.1;Name=WP_135370242.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9E93_RS22840;product=MFS transporter;protein_id=WP_135370242.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 7060 7938 . + . ID=gene-C9E93_RS22845;Name=C9E93_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22845;old_locus_tag=C9E93_23475 NZ_PYJV01000126.1 Protein Homology CDS 7060 7938 . + 0 ID=cds-WP_000176719.1;Parent=gene-C9E93_RS22845;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9E93_RS22845;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 8054 9124 . - . ID=gene-C9E93_RS22850;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9E93_RS22850;old_locus_tag=C9E93_23480 NZ_PYJV01000126.1 Protein Homology CDS 8054 9124 . - 0 ID=cds-WP_000858952.1;Parent=gene-C9E93_RS22850;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9E93_RS22850;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 9129 10487 . - . ID=gene-C9E93_RS22855;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9E93_RS22855;old_locus_tag=C9E93_23485 NZ_PYJV01000126.1 Protein Homology CDS 9129 10487 . - 0 ID=cds-WP_000948739.1;Parent=gene-C9E93_RS22855;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9E93_RS22855;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 10760 12388 . + . ID=gene-C9E93_RS22860;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9E93_RS22860;old_locus_tag=C9E93_23490 NZ_PYJV01000126.1 Protein Homology CDS 10760 12388 . + 0 ID=cds-WP_135370517.1;Parent=gene-C9E93_RS22860;Dbxref=GenBank:WP_135370517.1;Name=WP_135370517.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9E93_RS22860;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_135370517.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 12378 13637 . + . ID=gene-C9E93_RS22865;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9E93_RS22865;old_locus_tag=C9E93_23495 NZ_PYJV01000126.1 Protein Homology CDS 12378 13637 . + 0 ID=cds-WP_000667152.1;Parent=gene-C9E93_RS22865;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9E93_RS22865;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 13634 14824 . + . ID=gene-C9E93_RS22870;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9E93_RS22870;old_locus_tag=C9E93_23500 NZ_PYJV01000126.1 Protein Homology CDS 13634 14824 . + 0 ID=cds-WP_001285726.1;Parent=gene-C9E93_RS22870;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9E93_RS22870;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 15249 16271 . + . ID=gene-C9E93_RS22880;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9E93_RS22880;old_locus_tag=C9E93_23510 NZ_PYJV01000126.1 Protein Homology CDS 15249 16271 . + 0 ID=cds-WP_135400647.1;Parent=gene-C9E93_RS22880;Dbxref=GenBank:WP_135400647.1;Name=WP_135400647.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9E93_RS22880;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_135400647.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 16505 16681 . - . ID=gene-C9E93_RS22885;Name=C9E93_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22885;old_locus_tag=C9E93_23520 NZ_PYJV01000126.1 Protein Homology CDS 16505 16681 . - 0 ID=cds-WP_001112764.1;Parent=gene-C9E93_RS22885;Dbxref=GenBank:WP_001112764.1;Name=WP_001112764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9E93_RS22885;product=hypothetical protein;protein_id=WP_001112764.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 16687 17490 . - . ID=gene-C9E93_RS22890;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9E93_RS22890;old_locus_tag=C9E93_23525 NZ_PYJV01000126.1 Protein Homology CDS 16687 17490 . - 0 ID=cds-WP_135370424.1;Parent=gene-C9E93_RS22890;Dbxref=GenBank:WP_135370424.1;Name=WP_135370424.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9E93_RS22890;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_135370424.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 17516 18805 . - . ID=gene-C9E93_RS22895;Name=C9E93_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22895;old_locus_tag=C9E93_23530 NZ_PYJV01000126.1 Protein Homology CDS 17516 18805 . - 0 ID=cds-WP_000028931.1;Parent=gene-C9E93_RS22895;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9E93_RS22895;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 18861 20066 . - . ID=gene-C9E93_RS22900;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=C9E93_RS22900;old_locus_tag=C9E93_23535 NZ_PYJV01000126.1 Protein Homology CDS 18861 20066 . - 0 ID=cds-WP_001530644.1;Parent=gene-C9E93_RS22900;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9E93_RS22900;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 20080 20862 . - . ID=gene-C9E93_RS22905;Name=C9E93_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22905;old_locus_tag=C9E93_23540 NZ_PYJV01000126.1 Protein Homology CDS 20080 20862 . - 0 ID=cds-WP_021000541.1;Parent=gene-C9E93_RS22905;Dbxref=GenBank:WP_021000541.1;Name=WP_021000541.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9E93_RS22905;product=IclR family transcriptional regulator;protein_id=WP_021000541.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 21112 22308 . - . ID=gene-C9E93_RS22910;Name=C9E93_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22910;old_locus_tag=C9E93_23545 NZ_PYJV01000126.1 Protein Homology CDS 21112 22308 . - 0 ID=cds-WP_000935683.1;Parent=gene-C9E93_RS22910;Dbxref=GenBank:WP_000935683.1;Name=WP_000935683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9E93_RS22910;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935683.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 22423 22965 . - . ID=gene-C9E93_RS22915;Name=C9E93_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22915;old_locus_tag=C9E93_23550 NZ_PYJV01000126.1 Protein Homology CDS 22423 22965 . - 0 ID=cds-WP_001670658.1;Parent=gene-C9E93_RS22915;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9E93_RS22915;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 23244 23669 . + . ID=gene-C9E93_RS22920;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9E93_RS22920;old_locus_tag=C9E93_23555 NZ_PYJV01000126.1 Protein Homology CDS 23244 23669 . + 0 ID=cds-WP_001249902.1;Parent=gene-C9E93_RS22920;Dbxref=GenBank:WP_001249902.1;Name=WP_001249902.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9E93_RS22920;product=nucleoside triphosphatase NudI;protein_id=WP_001249902.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 23714 24319 . - . ID=gene-C9E93_RS22925;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9E93_RS22925;old_locus_tag=C9E93_23560 NZ_PYJV01000126.1 Protein Homology CDS 23714 24319 . - 0 ID=cds-WP_000879258.1;Parent=gene-C9E93_RS22925;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9E93_RS22925;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 24618 25757 . + . ID=gene-C9E93_RS22930;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9E93_RS22930;old_locus_tag=C9E93_23565 NZ_PYJV01000126.1 Protein Homology CDS 24618 25757 . + 0 ID=cds-WP_001279284.1;Parent=gene-C9E93_RS22930;Dbxref=GenBank:WP_001279284.1;Name=WP_001279284.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9E93_RS22930;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279284.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 25760 26743 . + . ID=gene-C9E93_RS22935;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9E93_RS22935;old_locus_tag=C9E93_23570 NZ_PYJV01000126.1 Protein Homology CDS 25760 26743 . + 0 ID=cds-WP_000458893.1;Parent=gene-C9E93_RS22935;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9E93_RS22935;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 26740 28722 . + . ID=gene-C9E93_RS22940;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9E93_RS22940;old_locus_tag=C9E93_23575 NZ_PYJV01000126.1 Protein Homology CDS 26740 28722 . + 0 ID=cds-WP_135370621.1;Parent=gene-C9E93_RS22940;Dbxref=GenBank:WP_135370621.1;Name=WP_135370621.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9E93_RS22940;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_135370621.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 28719 29618 . + . ID=gene-C9E93_RS22945;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9E93_RS22945;old_locus_tag=C9E93_23580 NZ_PYJV01000126.1 Protein Homology CDS 28719 29618 . + 0 ID=cds-WP_000169766.1;Parent=gene-C9E93_RS22945;Dbxref=GenBank:WP_000169766.1;Name=WP_000169766.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9E93_RS22945;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169766.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 29615 31261 . + . ID=gene-C9E93_RS22950;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9E93_RS22950;old_locus_tag=C9E93_23585 NZ_PYJV01000126.1 Protein Homology CDS 29615 31261 . + 0 ID=cds-WP_000978038.1;Parent=gene-C9E93_RS22950;Dbxref=GenBank:WP_000978038.1;Name=WP_000978038.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9E93_RS22950;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978038.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 31258 31593 . + . ID=gene-C9E93_RS22955;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9E93_RS22955;old_locus_tag=C9E93_23590 NZ_PYJV01000126.1 Protein Homology CDS 31258 31593 . + 0 ID=cds-WP_000580688.1;Parent=gene-C9E93_RS22955;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9E93_RS22955;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 31593 31970 . + . ID=gene-C9E93_RS22960;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=C9E93_RS22960;old_locus_tag=C9E93_23595 NZ_PYJV01000126.1 Protein Homology CDS 31593 31970 . + 0 ID=cds-WP_000538696.1;Parent=gene-C9E93_RS22960;Dbxref=GenBank:WP_000538696.1;Name=WP_000538696.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9E93_RS22960;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538696.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 31965 32222 . - . ID=gene-C9E93_RS22965;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9E93_RS22965;old_locus_tag=C9E93_23600 NZ_PYJV01000126.1 Protein Homology CDS 31965 32222 . - 0 ID=cds-WP_000455132.1;Parent=gene-C9E93_RS22965;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9E93_RS22965;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 32320 33687 . - . ID=gene-C9E93_RS22970;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9E93_RS22970;old_locus_tag=C9E93_23605 NZ_PYJV01000126.1 Protein Homology CDS 32320 33687 . - 0 ID=cds-WP_135370622.1;Parent=gene-C9E93_RS22970;Dbxref=GenBank:WP_135370622.1;Name=WP_135370622.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9E93_RS22970;product=o-succinylbenzoate--CoA ligase;protein_id=WP_135370622.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 33684 34646 . - . ID=gene-C9E93_RS22975;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9E93_RS22975;old_locus_tag=C9E93_23610 NZ_PYJV01000126.1 Protein Homology CDS 33684 34646 . - 0 ID=cds-WP_001255560.1;Parent=gene-C9E93_RS22975;Dbxref=GenBank:WP_001255560.1;Name=WP_001255560.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9E93_RS22975;product=o-succinylbenzoate synthase;protein_id=WP_001255560.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 34646 35503 . - . ID=gene-C9E93_RS22980;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9E93_RS22980;old_locus_tag=C9E93_23615 NZ_PYJV01000126.1 Protein Homology CDS 34646 35503 . - 0 ID=cds-WP_000640013.1;Parent=gene-C9E93_RS22980;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9E93_RS22980;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 35518 36276 . - . ID=gene-C9E93_RS22985;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=C9E93_RS22985;old_locus_tag=C9E93_23620 NZ_PYJV01000126.1 Protein Homology CDS 35518 36276 . - 0 ID=cds-WP_024155126.1;Parent=gene-C9E93_RS22985;Dbxref=GenBank:WP_024155126.1;Name=WP_024155126.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9E93_RS22985;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_024155126.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 36273 37943 . - . ID=gene-C9E93_RS22990;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9E93_RS22990;old_locus_tag=C9E93_23625 NZ_PYJV01000126.1 Protein Homology CDS 36273 37943 . - 0 ID=cds-WP_000116382.1;Parent=gene-C9E93_RS22990;Dbxref=GenBank:WP_000116382.1;Name=WP_000116382.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9E93_RS22990;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116382.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 38029 39324 . - . ID=gene-C9E93_RS22995;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9E93_RS22995;old_locus_tag=C9E93_23630 NZ_PYJV01000126.1 Protein Homology CDS 38029 39324 . - 0 ID=cds-WP_135370623.1;Parent=gene-C9E93_RS22995;Dbxref=GenBank:WP_135370623.1;Name=WP_135370623.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9E93_RS22995;product=isochorismate synthase MenF;protein_id=WP_135370623.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 39425 39730 . - . ID=gene-C9E93_RS23000;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9E93_RS23000;old_locus_tag=C9E93_23635 NZ_PYJV01000126.1 Protein Homology CDS 39425 39730 . - 0 ID=cds-WP_001522308.1;Parent=gene-C9E93_RS23000;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9E93_RS23000;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 39785 40246 . - . ID=gene-C9E93_RS23005;Name=C9E93_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23005;old_locus_tag=C9E93_23640 NZ_PYJV01000126.1 Protein Homology CDS 39785 40246 . - 0 ID=cds-WP_000568155.1;Parent=gene-C9E93_RS23005;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9E93_RS23005;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 40307 41224 . + . ID=gene-C9E93_RS23010;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9E93_RS23010;old_locus_tag=C9E93_23645 NZ_PYJV01000126.1 Protein Homology CDS 40307 41224 . + 0 ID=cds-WP_135370624.1;Parent=gene-C9E93_RS23010;Dbxref=GenBank:WP_135370624.1;Name=WP_135370624.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9E93_RS23010;product=ribonuclease BN;protein_id=WP_135370624.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 41290 42291 . + . ID=gene-C9E93_RS23015;Name=C9E93_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23015;old_locus_tag=C9E93_23650 NZ_PYJV01000126.1 Protein Homology CDS 41290 42291 . + 0 ID=cds-WP_000368558.1;Parent=gene-C9E93_RS23015;Dbxref=GenBank:WP_000368558.1;Name=WP_000368558.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9E93_RS23015;product=chemotaxis protein;protein_id=WP_000368558.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 42332 44128 . - . ID=gene-C9E93_RS23020;Name=C9E93_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23020;old_locus_tag=C9E93_23655 NZ_PYJV01000126.1 Protein Homology CDS 42332 44128 . - 0 ID=cds-WP_135400648.1;Parent=gene-C9E93_RS23020;Dbxref=GenBank:WP_135400648.1;Name=WP_135400648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9E93_RS23020;product=vWA domain-containing protein;protein_id=WP_135400648.1;transl_table=11 NZ_PYJV01000126.1 RefSeq gene 44848 47747 . - . ID=gene-C9E93_RS23030;Name=C9E93_RS23030;end_range=47747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23030;old_locus_tag=C9E93_23665;partial=true NZ_PYJV01000126.1 Protein Homology CDS 44848 47747 . - 2 ID=cds-WP_135400649.1;Parent=gene-C9E93_RS23030;Dbxref=GenBank:WP_135400649.1;Name=WP_135400649.1;Ontology_term=GO:0019867;end_range=47747,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9E93_RS23030;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135400649.1;transl_table=11 ##sequence-region NZ_PYJV01000021.1 1 47448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000021.1 RefSeq region 1 47448 . + . ID=NZ_PYJV01000021.1:1..47448;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000021.1 RefSeq gene 131 628 . + . ID=gene-C9E93_RS02160;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9E93_RS02160;old_locus_tag=C9E93_02245 NZ_PYJV01000021.1 Protein Homology CDS 131 628 . + 0 ID=cds-WP_000920613.1;Parent=gene-C9E93_RS02160;Dbxref=GenBank:WP_000920613.1;Name=WP_000920613.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9E93_RS02160;product=non-heme ferritin;protein_id=WP_000920613.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 674 913 . - . ID=gene-C9E93_RS02165;Name=C9E93_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02165;old_locus_tag=C9E93_02250 NZ_PYJV01000021.1 Protein Homology CDS 674 913 . - 0 ID=cds-WP_076741631.1;Parent=gene-C9E93_RS02165;Dbxref=GenBank:WP_076741631.1;Name=WP_076741631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9E93_RS02165;product=YecH family metal-binding protein;protein_id=WP_076741631.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 1140 2351 . + . ID=gene-C9E93_RS02170;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=C9E93_RS02170;old_locus_tag=C9E93_02255 NZ_PYJV01000021.1 Protein Homology CDS 1140 2351 . + 0 ID=cds-WP_001562965.1;Parent=gene-C9E93_RS02170;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9E93_RS02170;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 2426 3091 . - . ID=gene-C9E93_RS02175;Name=C9E93_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02175;old_locus_tag=C9E93_02260 NZ_PYJV01000021.1 Protein Homology CDS 2426 3091 . - 0 ID=cds-WP_000781521.1;Parent=gene-C9E93_RS02175;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9E93_RS02175;product=YecA/YgfB family protein;protein_id=WP_000781521.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 3329 3655 . - . ID=gene-C9E93_RS02180;Name=C9E93_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02180;old_locus_tag=C9E93_02265 NZ_PYJV01000021.1 Protein Homology CDS 3329 3655 . - 0 ID=cds-WP_000240837.1;Parent=gene-C9E93_RS02180;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9E93_RS02180;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 3868 5307 . - . ID=gene-C9E93_RS02185;Name=C9E93_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02185;old_locus_tag=C9E93_02270 NZ_PYJV01000021.1 Protein Homology CDS 3868 5307 . - 0 ID=cds-WP_135370595.1;Parent=gene-C9E93_RS02185;Dbxref=GenBank:WP_135370595.1;Name=WP_135370595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9E93_RS02185;product=SH3 domain-containing C40 family peptidase;protein_id=WP_135370595.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 5521 5853 . - . ID=gene-C9E93_RS02190;Name=C9E93_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02190;old_locus_tag=C9E93_02275 NZ_PYJV01000021.1 Protein Homology CDS 5521 5853 . - 0 ID=cds-WP_023209714.1;Parent=gene-C9E93_RS02190;Dbxref=GenBank:WP_023209714.1;Name=WP_023209714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9E93_RS02190;product=hypothetical protein;protein_id=WP_023209714.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 6103 6189 . - . ID=gene-C9E93_RS02195;Name=C9E93_RS02195;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS02195;old_locus_tag=C9E93_02280 NZ_PYJV01000021.1 tRNAscan-SE tRNA 6103 6189 . - . ID=rna-C9E93_RS02195;Parent=gene-C9E93_RS02195;anticodon=(pos:complement(6153..6155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02195;product=tRNA-Leu NZ_PYJV01000021.1 tRNAscan-SE exon 6103 6189 . - . ID=exon-C9E93_RS02195-1;Parent=rna-C9E93_RS02195;anticodon=(pos:complement(6153..6155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02195;product=tRNA-Leu NZ_PYJV01000021.1 RefSeq gene 6201 6274 . - . ID=gene-C9E93_RS02200;Name=C9E93_RS02200;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS02200;old_locus_tag=C9E93_02285 NZ_PYJV01000021.1 tRNAscan-SE tRNA 6201 6274 . - . ID=rna-C9E93_RS02200;Parent=gene-C9E93_RS02200;anticodon=(pos:complement(6240..6242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02200;product=tRNA-Cys NZ_PYJV01000021.1 tRNAscan-SE exon 6201 6274 . - . ID=exon-C9E93_RS02200-1;Parent=rna-C9E93_RS02200;anticodon=(pos:complement(6240..6242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02200;product=tRNA-Cys NZ_PYJV01000021.1 RefSeq gene 6326 6401 . - . ID=gene-C9E93_RS02205;Name=C9E93_RS02205;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS02205;old_locus_tag=C9E93_02290 NZ_PYJV01000021.1 tRNAscan-SE tRNA 6326 6401 . - . ID=rna-C9E93_RS02205;Parent=gene-C9E93_RS02205;anticodon=(pos:complement(6366..6368));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02205;product=tRNA-Gly NZ_PYJV01000021.1 tRNAscan-SE exon 6326 6401 . - . ID=exon-C9E93_RS02205-1;Parent=rna-C9E93_RS02205;anticodon=(pos:complement(6366..6368));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS02205;product=tRNA-Gly NZ_PYJV01000021.1 RefSeq gene 6553 7101 . - . ID=gene-C9E93_RS02210;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9E93_RS02210;old_locus_tag=C9E93_02295 NZ_PYJV01000021.1 Protein Homology CDS 6553 7101 . - 0 ID=cds-WP_001160192.1;Parent=gene-C9E93_RS02210;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9E93_RS02210;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 7158 8990 . - . ID=gene-C9E93_RS02215;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9E93_RS02215;old_locus_tag=C9E93_02300 NZ_PYJV01000021.1 Protein Homology CDS 7158 8990 . - 0 ID=cds-WP_023254656.1;Parent=gene-C9E93_RS02215;Dbxref=GenBank:WP_023254656.1;Name=WP_023254656.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9E93_RS02215;product=excinuclease ABC subunit UvrC;protein_id=WP_023254656.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 8987 9643 . - . ID=gene-C9E93_RS02220;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9E93_RS02220;old_locus_tag=C9E93_02305 NZ_PYJV01000021.1 Protein Homology CDS 8987 9643 . - 0 ID=cds-WP_000611323.1;Parent=gene-C9E93_RS02220;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9E93_RS02220;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 9955 10110 . + . ID=gene-C9E93_RS02225;Name=C9E93_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02225;old_locus_tag=C9E93_02310 NZ_PYJV01000021.1 Protein Homology CDS 9955 10110 . + 0 ID=cds-WP_000546186.1;Parent=gene-C9E93_RS02225;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9E93_RS02225;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 10107 10331 . + . ID=gene-C9E93_RS02230;Name=C9E93_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02230;old_locus_tag=C9E93_02315 NZ_PYJV01000021.1 Protein Homology CDS 10107 10331 . + 0 ID=cds-WP_000106483.1;Parent=gene-C9E93_RS02230;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9E93_RS02230;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 10398 11120 . - . ID=gene-C9E93_RS02235;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9E93_RS02235;old_locus_tag=C9E93_02320 NZ_PYJV01000021.1 Protein Homology CDS 10398 11120 . - 0 ID=cds-WP_001157172.1;Parent=gene-C9E93_RS02235;Dbxref=GenBank:WP_001157172.1;Name=WP_001157172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9E93_RS02235;product=transcriptional regulator SdiA;protein_id=WP_001157172.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 11353 12105 . - . ID=gene-C9E93_RS02240;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=C9E93_RS02240;old_locus_tag=C9E93_02325 NZ_PYJV01000021.1 Protein Homology CDS 11353 12105 . - 0 ID=cds-WP_001273033.1;Parent=gene-C9E93_RS02240;Dbxref=GenBank:WP_001273033.1;Name=WP_001273033.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9E93_RS02240;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273033.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 12102 12770 . - . ID=gene-C9E93_RS02245;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9E93_RS02245;old_locus_tag=C9E93_02330 NZ_PYJV01000021.1 Protein Homology CDS 12102 12770 . - 0 ID=cds-WP_001158238.1;Parent=gene-C9E93_RS02245;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9E93_RS02245;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 12791 13777 . - . ID=gene-C9E93_RS02250;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=C9E93_RS02250;old_locus_tag=C9E93_02335 NZ_PYJV01000021.1 Protein Homology CDS 12791 13777 . - 0 ID=cds-WP_001128188.1;Parent=gene-C9E93_RS02250;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9E93_RS02250;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 13931 14731 . - . ID=gene-C9E93_RS02255;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9E93_RS02255;old_locus_tag=C9E93_02340 NZ_PYJV01000021.1 Protein Homology CDS 13931 14731 . - 0 ID=cds-WP_000761634.1;Parent=gene-C9E93_RS02255;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9E93_RS02255;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 14878 15429 . - . ID=gene-C9E93_RS02260;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9E93_RS02260;old_locus_tag=C9E93_02345 NZ_PYJV01000021.1 Protein Homology CDS 14878 15429 . - 0 ID=cds-WP_000218080.1;Parent=gene-C9E93_RS02260;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9E93_RS02260;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 15488 16207 . - . ID=gene-C9E93_RS02265;Name=C9E93_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02265;old_locus_tag=C9E93_02350 NZ_PYJV01000021.1 Protein Homology CDS 15488 16207 . - 0 ID=cds-WP_001087453.1;Parent=gene-C9E93_RS02265;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9E93_RS02265;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 16404 17609 . - . ID=gene-C9E93_RS02270;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9E93_RS02270;old_locus_tag=C9E93_02355 NZ_PYJV01000021.1 Protein Homology CDS 16404 17609 . - 0 ID=cds-WP_135370440.1;Parent=gene-C9E93_RS02270;Dbxref=GenBank:WP_135370440.1;Name=WP_135370440.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9E93_RS02270;product=flagellin lysine-N-methylase;protein_id=WP_135370440.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 17688 19205 . - . ID=gene-C9E93_RS02275;Name=C9E93_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02275;old_locus_tag=C9E93_02360 NZ_PYJV01000021.1 Protein Homology CDS 17688 19205 . - 0 ID=cds-WP_080111220.1;Parent=gene-C9E93_RS02275;Dbxref=GenBank:WP_080111220.1;Name=WP_080111220.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=C9E93_RS02275;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_080111220.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 19223 19462 . - . ID=gene-C9E93_RS02280;Name=C9E93_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02280;old_locus_tag=C9E93_02365 NZ_PYJV01000021.1 GeneMarkS-2+ CDS 19223 19462 . - 0 ID=cds-WP_001141165.1;Parent=gene-C9E93_RS02280;Dbxref=GenBank:WP_001141165.1;Name=WP_001141165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS02280;product=hypothetical protein;protein_id=WP_001141165.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 19461 20867 . + . ID=gene-C9E93_RS02285;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9E93_RS02285;old_locus_tag=C9E93_02370 NZ_PYJV01000021.1 Protein Homology CDS 19461 20867 . + 0 ID=cds-WP_079966998.1;Parent=gene-C9E93_RS02285;Dbxref=GenBank:WP_079966998.1;Name=WP_079966998.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9E93_RS02285;product=flagellar filament capping protein FliD;protein_id=WP_079966998.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 20882 21289 . + . ID=gene-C9E93_RS02290;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9E93_RS02290;old_locus_tag=C9E93_02375 NZ_PYJV01000021.1 Protein Homology CDS 20882 21289 . + 0 ID=cds-WP_000287760.1;Parent=gene-C9E93_RS02290;Dbxref=GenBank:WP_000287760.1;Name=WP_000287760.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9E93_RS02290;product=flagellar export chaperone FliS;protein_id=WP_000287760.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 21289 21657 . + . ID=gene-C9E93_RS02295;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9E93_RS02295;old_locus_tag=C9E93_02380 NZ_PYJV01000021.1 Protein Homology CDS 21289 21657 . + 0 ID=cds-WP_000204899.1;Parent=gene-C9E93_RS02295;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9E93_RS02295;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 21729 23213 . + . ID=gene-C9E93_RS02300;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9E93_RS02300;old_locus_tag=C9E93_02385 NZ_PYJV01000021.1 Protein Homology CDS 21729 23213 . + 0 ID=cds-WP_080111219.1;Parent=gene-C9E93_RS02300;Dbxref=GenBank:WP_080111219.1;Name=WP_080111219.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9E93_RS02300;product=alpha-amylase;protein_id=WP_080111219.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 23253 23666 . - . ID=gene-C9E93_RS02305;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=C9E93_RS02305;old_locus_tag=C9E93_02390 NZ_PYJV01000021.1 Protein Homology CDS 23253 23666 . - 0 ID=cds-WP_000754694.1;Parent=gene-C9E93_RS02305;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=C9E93_RS02305;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 23852 25057 . + . ID=gene-C9E93_RS02310;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9E93_RS02310;old_locus_tag=C9E93_02395 NZ_PYJV01000021.1 Protein Homology CDS 23852 25057 . + 0 ID=cds-WP_001519382.1;Parent=gene-C9E93_RS02310;Dbxref=GenBank:WP_001519382.1;Name=WP_001519382.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9E93_RS02310;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001519382.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 25054 25287 . + . ID=gene-C9E93_RS02315;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9E93_RS02315;old_locus_tag=C9E93_02400 NZ_PYJV01000021.1 Protein Homology CDS 25054 25287 . + 0 ID=cds-WP_000790504.1;Parent=gene-C9E93_RS02315;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9E93_RS02315;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 25552 25938 . + . ID=gene-C9E93_RS02320;Name=C9E93_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02320;old_locus_tag=C9E93_02405 NZ_PYJV01000021.1 Protein Homology CDS 25552 25938 . + 0 ID=cds-WP_135370550.1;Parent=gene-C9E93_RS02320;Dbxref=GenBank:WP_135370550.1;Name=WP_135370550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9E93_RS02320;product=hypothetical protein;protein_id=WP_135370550.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 26058 26372 . - . ID=gene-C9E93_RS02325;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9E93_RS02325;old_locus_tag=C9E93_02410 NZ_PYJV01000021.1 Protein Homology CDS 26058 26372 . - 0 ID=cds-WP_000719039.1;Parent=gene-C9E93_RS02325;Dbxref=GenBank:WP_000719039.1;Name=WP_000719039.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9E93_RS02325;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719039.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 26589 28271 . + . ID=gene-C9E93_RS02330;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9E93_RS02330;old_locus_tag=C9E93_02415 NZ_PYJV01000021.1 Protein Homology CDS 26589 28271 . + 0 ID=cds-WP_135370545.1;Parent=gene-C9E93_RS02330;Dbxref=GenBank:WP_135370545.1;Name=WP_135370545.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9E93_RS02330;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_135370545.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 28264 29259 . + . ID=gene-C9E93_RS02335;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9E93_RS02335;old_locus_tag=C9E93_02420 NZ_PYJV01000021.1 Protein Homology CDS 28264 29259 . + 0 ID=cds-WP_000067735.1;Parent=gene-C9E93_RS02335;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9E93_RS02335;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 29252 29959 . + . ID=gene-C9E93_RS02340;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9E93_RS02340;old_locus_tag=C9E93_02425 NZ_PYJV01000021.1 Protein Homology CDS 29252 29959 . + 0 ID=cds-WP_000064158.1;Parent=gene-C9E93_RS02340;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9E93_RS02340;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 29959 31329 . + . ID=gene-C9E93_RS02345;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9E93_RS02345;old_locus_tag=C9E93_02430 NZ_PYJV01000021.1 Protein Homology CDS 29959 31329 . + 0 ID=cds-WP_000213257.1;Parent=gene-C9E93_RS02345;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9E93_RS02345;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 31351 31794 . + . ID=gene-C9E93_RS02350;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9E93_RS02350;old_locus_tag=C9E93_02435 NZ_PYJV01000021.1 Protein Homology CDS 31351 31794 . + 0 ID=cds-WP_000046981.1;Parent=gene-C9E93_RS02350;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9E93_RS02350;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 31791 33014 . + . ID=gene-C9E93_RS02355;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=C9E93_RS02355;old_locus_tag=C9E93_02440 NZ_PYJV01000021.1 Protein Homology CDS 31791 33014 . + 0 ID=cds-WP_039590423.1;Parent=gene-C9E93_RS02355;Dbxref=GenBank:WP_039590423.1;Name=WP_039590423.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9E93_RS02355;product=flagellar hook length control protein FliK;protein_id=WP_039590423.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 33119 33586 . + . ID=gene-C9E93_RS02360;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9E93_RS02360;old_locus_tag=C9E93_02445 NZ_PYJV01000021.1 Protein Homology CDS 33119 33586 . + 0 ID=cds-WP_000132169.1;Parent=gene-C9E93_RS02360;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9E93_RS02360;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 33591 34595 . + . ID=gene-C9E93_RS02365;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9E93_RS02365;old_locus_tag=C9E93_02450 NZ_PYJV01000021.1 Protein Homology CDS 33591 34595 . + 0 ID=cds-WP_000502811.1;Parent=gene-C9E93_RS02365;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9E93_RS02365;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 34592 35005 . + . ID=gene-C9E93_RS02370;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9E93_RS02370;old_locus_tag=C9E93_02455 NZ_PYJV01000021.1 Protein Homology CDS 34592 35005 . + 0 ID=cds-WP_001282111.1;Parent=gene-C9E93_RS02370;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9E93_RS02370;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 35005 35382 . + . ID=gene-C9E93_RS02375;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9E93_RS02375;old_locus_tag=C9E93_02460 NZ_PYJV01000021.1 Protein Homology CDS 35005 35382 . + 0 ID=cds-WP_000978276.1;Parent=gene-C9E93_RS02375;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9E93_RS02375;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 35382 36119 . + . ID=gene-C9E93_RS02380;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9E93_RS02380;old_locus_tag=C9E93_02465 NZ_PYJV01000021.1 Protein Homology CDS 35382 36119 . + 0 ID=cds-WP_001253414.1;Parent=gene-C9E93_RS02380;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9E93_RS02380;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 36129 36398 . + . ID=gene-C9E93_RS02385;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9E93_RS02385;old_locus_tag=C9E93_02470 NZ_PYJV01000021.1 Protein Homology CDS 36129 36398 . + 0 ID=cds-WP_000187355.1;Parent=gene-C9E93_RS02385;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9E93_RS02385;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 36407 37201 . + . ID=gene-C9E93_RS02390;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9E93_RS02390;old_locus_tag=C9E93_02475 NZ_PYJV01000021.1 Protein Homology CDS 36407 37201 . + 0 ID=cds-WP_000616953.1;Parent=gene-C9E93_RS02390;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9E93_RS02390;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 37483 38106 . + . ID=gene-C9E93_RS02395;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9E93_RS02395;old_locus_tag=C9E93_02480 NZ_PYJV01000021.1 Protein Homology CDS 37483 38106 . + 0 ID=cds-WP_135370546.1;Parent=gene-C9E93_RS02395;Dbxref=GenBank:WP_135370546.1;Name=WP_135370546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9E93_RS02395;product=transcriptional regulator RcsA;protein_id=WP_135370546.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 38145 38339 . - . ID=gene-C9E93_RS02400;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9E93_RS02400;old_locus_tag=C9E93_02485 NZ_PYJV01000021.1 Protein Homology CDS 38145 38339 . - 0 ID=cds-WP_000867218.1;Parent=gene-C9E93_RS02400;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9E93_RS02400;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 38468 38695 . + . ID=gene-C9E93_RS02405;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9E93_RS02405;old_locus_tag=C9E93_02490 NZ_PYJV01000021.1 Protein Homology CDS 38468 38695 . + 0 ID=cds-WP_000844798.1;Parent=gene-C9E93_RS02405;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9E93_RS02405;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 39005 39820 . + . ID=gene-C9E93_RS02410;Name=C9E93_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02410;old_locus_tag=C9E93_02495 NZ_PYJV01000021.1 Protein Homology CDS 39005 39820 . + 0 ID=cds-WP_135370547.1;Parent=gene-C9E93_RS02410;Dbxref=GenBank:WP_135370547.1;Name=WP_135370547.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9E93_RS02410;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_135370547.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 39799 41511 . - . ID=gene-C9E93_RS02415;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9E93_RS02415;old_locus_tag=C9E93_02500 NZ_PYJV01000021.1 Protein Homology CDS 39799 41511 . - 0 ID=cds-WP_023221082.1;Parent=gene-C9E93_RS02415;Dbxref=GenBank:WP_023221082.1;Name=WP_023221082.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9E93_RS02415;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_023221082.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 41676 41861 . - . ID=gene-C9E93_RS02420;Name=C9E93_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02420;old_locus_tag=C9E93_02505 NZ_PYJV01000021.1 Protein Homology CDS 41676 41861 . - 0 ID=cds-WP_001521741.1;Parent=gene-C9E93_RS02420;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9E93_RS02420;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 41938 42855 . - . ID=gene-C9E93_RS02425;Name=C9E93_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02425;old_locus_tag=C9E93_02510 NZ_PYJV01000021.1 Protein Homology CDS 41938 42855 . - 0 ID=cds-WP_085920526.1;Parent=gene-C9E93_RS02425;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9E93_RS02425;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 43025 43945 . + . ID=gene-C9E93_RS02430;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9E93_RS02430;old_locus_tag=C9E93_02515 NZ_PYJV01000021.1 Protein Homology CDS 43025 43945 . + 0 ID=cds-WP_135370548.1;Parent=gene-C9E93_RS02430;Dbxref=GenBank:WP_135370548.1;Name=WP_135370548.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9E93_RS02430;product=drug/metabolite exporter YedA;protein_id=WP_135370548.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 43934 44404 . - . ID=gene-C9E93_RS02435;Name=C9E93_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02435;old_locus_tag=C9E93_02520 NZ_PYJV01000021.1 Protein Homology CDS 43934 44404 . - 0 ID=cds-WP_000785978.1;Parent=gene-C9E93_RS02435;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9E93_RS02435;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 44385 45815 . - . ID=gene-C9E93_RS02440;Name=C9E93_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02440;old_locus_tag=C9E93_02525 NZ_PYJV01000021.1 Protein Homology CDS 44385 45815 . - 0 ID=cds-WP_001157305.1;Parent=gene-C9E93_RS02440;Dbxref=GenBank:WP_001157305.1;Name=WP_001157305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9E93_RS02440;product=DNA cytosine methyltransferase;protein_id=WP_001157305.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 45889 46584 . - . ID=gene-C9E93_RS02445;Name=C9E93_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS02445;old_locus_tag=C9E93_02530 NZ_PYJV01000021.1 Protein Homology CDS 45889 46584 . - 0 ID=cds-WP_135370549.1;Parent=gene-C9E93_RS02445;Dbxref=GenBank:WP_135370549.1;Name=WP_135370549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9E93_RS02445;product=phosphohydrolase;protein_id=WP_135370549.1;transl_table=11 NZ_PYJV01000021.1 RefSeq gene 46664 46975 . - . ID=gene-C9E93_RS02450;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9E93_RS02450;old_locus_tag=C9E93_02535 NZ_PYJV01000021.1 Protein Homology CDS 46664 46975 . - 0 ID=cds-WP_072202292.1;Parent=gene-C9E93_RS02450;Dbxref=GenBank:WP_072202292.1;Name=WP_072202292.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=C9E93_RS02450;product=cell division protein DrpB;protein_id=WP_072202292.1;transl_table=11 ##sequence-region NZ_PYJV01000122.1 1 43613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000122.1 RefSeq region 1 43613 . + . ID=NZ_PYJV01000122.1:1..43613;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000122.1 RefSeq gene 104 775 . + . ID=gene-C9E93_RS21925;Name=C9E93_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21925;old_locus_tag=C9E93_22500 NZ_PYJV01000122.1 Protein Homology CDS 104 775 . + 0 ID=cds-WP_000811635.1;Parent=gene-C9E93_RS21925;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9E93_RS21925;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 1114 1659 . + . ID=gene-C9E93_RS21930;Name=C9E93_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21930;old_locus_tag=C9E93_22505 NZ_PYJV01000122.1 Protein Homology CDS 1114 1659 . + 0 ID=cds-WP_000482235.1;Parent=gene-C9E93_RS21930;Dbxref=GenBank:WP_000482235.1;Name=WP_000482235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9E93_RS21930;product=fimbrial protein;protein_id=WP_000482235.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 1729 2412 . + . ID=gene-C9E93_RS21935;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E93_RS21935;old_locus_tag=C9E93_22510 NZ_PYJV01000122.1 Protein Homology CDS 1729 2412 . + 0 ID=cds-WP_000680512.1;Parent=gene-C9E93_RS21935;Dbxref=GenBank:WP_000680512.1;Name=WP_000680512.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9E93_RS21935;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680512.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 2458 4995 . + . ID=gene-C9E93_RS21940;Name=C9E93_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21940;old_locus_tag=C9E93_22515 NZ_PYJV01000122.1 Protein Homology CDS 2458 4995 . + 0 ID=cds-WP_001160707.1;Parent=gene-C9E93_RS21940;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9E93_RS21940;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 5013 5570 . + . ID=gene-C9E93_RS21945;Name=C9E93_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21945;old_locus_tag=C9E93_22520 NZ_PYJV01000122.1 Protein Homology CDS 5013 5570 . + 0 ID=cds-WP_094889037.1;Parent=gene-C9E93_RS21945;Dbxref=GenBank:WP_094889037.1;Name=WP_094889037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9E93_RS21945;product=fimbrial protein;protein_id=WP_094889037.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 5611 6696 . + . ID=gene-C9E93_RS21950;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9E93_RS21950;old_locus_tag=C9E93_22525 NZ_PYJV01000122.1 Protein Homology CDS 5611 6696 . + 0 ID=cds-WP_023250198.1;Parent=gene-C9E93_RS21950;Dbxref=GenBank:WP_023250198.1;Name=WP_023250198.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9E93_RS21950;product=fimbrial major subunit SthE;protein_id=WP_023250198.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 6754 8103 . - . ID=gene-C9E93_RS21955;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=C9E93_RS21955;old_locus_tag=C9E93_22530 NZ_PYJV01000122.1 Protein Homology CDS 6754 8103 . - 0 ID=cds-WP_000920384.1;Parent=gene-C9E93_RS21955;Dbxref=GenBank:WP_000920384.1;Name=WP_000920384.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=C9E93_RS21955;product=cell envelope integrity protein CreD;protein_id=WP_000920384.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 8161 9585 . - . ID=gene-C9E93_RS21960;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9E93_RS21960;old_locus_tag=C9E93_22535 NZ_PYJV01000122.1 Protein Homology CDS 8161 9585 . - 0 ID=cds-WP_135370430.1;Parent=gene-C9E93_RS21960;Dbxref=GenBank:WP_135370430.1;Name=WP_135370430.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9E93_RS21960;product=two-component system sensor histidine kinase CreC;protein_id=WP_135370430.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 9585 10274 . - . ID=gene-C9E93_RS21965;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9E93_RS21965;old_locus_tag=C9E93_22540 NZ_PYJV01000122.1 Protein Homology CDS 9585 10274 . - 0 ID=cds-WP_001187049.1;Parent=gene-C9E93_RS21965;Dbxref=GenBank:WP_001187049.1;Name=WP_001187049.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9E93_RS21965;product=two-component system response regulator CreB;protein_id=WP_001187049.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 10287 10760 . - . ID=gene-C9E93_RS21970;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9E93_RS21970;old_locus_tag=C9E93_22545 NZ_PYJV01000122.1 Protein Homology CDS 10287 10760 . - 0 ID=cds-WP_000875811.1;Parent=gene-C9E93_RS21970;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9E93_RS21970;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 10972 11841 . + . ID=gene-C9E93_RS21975;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9E93_RS21975;old_locus_tag=C9E93_22550 NZ_PYJV01000122.1 Protein Homology CDS 10972 11841 . + 0 ID=cds-WP_000371685.1;Parent=gene-C9E93_RS21975;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9E93_RS21975;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 11838 12485 . - . ID=gene-C9E93_RS21980;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9E93_RS21980;old_locus_tag=C9E93_22555 NZ_PYJV01000122.1 Protein Homology CDS 11838 12485 . - 0 ID=cds-WP_000942363.1;Parent=gene-C9E93_RS21980;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9E93_RS21980;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 12534 13049 . + . ID=gene-C9E93_RS21985;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9E93_RS21985;old_locus_tag=C9E93_22560 NZ_PYJV01000122.1 Protein Homology CDS 12534 13049 . + 0 ID=cds-WP_000554311.1;Parent=gene-C9E93_RS21985;Dbxref=GenBank:WP_000554311.1;Name=WP_000554311.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9E93_RS21985;product=inosine/xanthosine triphosphatase;protein_id=WP_000554311.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 13151 13477 . - . ID=gene-C9E93_RS21990;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9E93_RS21990;old_locus_tag=C9E93_22565 NZ_PYJV01000122.1 Protein Homology CDS 13151 13477 . - 0 ID=cds-WP_000192003.1;Parent=gene-C9E93_RS21990;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9E93_RS21990;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 13535 15472 . - . ID=gene-C9E93_RS21995;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9E93_RS21995;old_locus_tag=C9E93_22570 NZ_PYJV01000122.1 Protein Homology CDS 13535 15472 . - 0 ID=cds-WP_001584412.1;Parent=gene-C9E93_RS21995;Dbxref=GenBank:WP_001584412.1;Name=WP_001584412.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=C9E93_RS21995;product=murein transglycosylase;protein_id=WP_001584412.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 15681 17348 . + . ID=gene-C9E93_RS22000;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9E93_RS22000;old_locus_tag=C9E93_22580 NZ_PYJV01000122.1 Protein Homology CDS 15681 17348 . + 0 ID=cds-WP_000046770.1;Parent=gene-C9E93_RS22000;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9E93_RS22000;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 17466 18698 . - . ID=gene-C9E93_RS22005;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9E93_RS22005;old_locus_tag=C9E93_22585 NZ_PYJV01000122.1 Protein Homology CDS 17466 18698 . - 0 ID=cds-WP_001519486.1;Parent=gene-C9E93_RS22005;Dbxref=GenBank:WP_001519486.1;Name=WP_001519486.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9E93_RS22005;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001519486.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 18849 20231 . - . ID=gene-C9E93_RS22010;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9E93_RS22010;old_locus_tag=C9E93_22590 NZ_PYJV01000122.1 Protein Homology CDS 18849 20231 . - 0 ID=cds-WP_001029710.1;Parent=gene-C9E93_RS22010;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9E93_RS22010;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 20315 21283 . - . ID=gene-C9E93_RS22015;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E93_RS22015;old_locus_tag=C9E93_22595 NZ_PYJV01000122.1 Protein Homology CDS 20315 21283 . - 0 ID=cds-WP_001132983.1;Parent=gene-C9E93_RS22015;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9E93_RS22015;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 21400 22044 . + . ID=gene-C9E93_RS22025;Name=C9E93_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22025;old_locus_tag=C9E93_22605 NZ_PYJV01000122.1 Protein Homology CDS 21400 22044 . + 0 ID=cds-WP_000090067.1;Parent=gene-C9E93_RS22025;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9E93_RS22025;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 22078 23094 . + . ID=gene-C9E93_RS22030;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9E93_RS22030;old_locus_tag=C9E93_22610 NZ_PYJV01000122.1 Protein Homology CDS 22078 23094 . + 0 ID=cds-WP_135400643.1;Parent=gene-C9E93_RS22030;Dbxref=GenBank:WP_135400643.1;Name=WP_135400643.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9E93_RS22030;product=lipoate--protein ligase LplA;protein_id=WP_135400643.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 23407 24096 . + . ID=gene-C9E93_RS22035;Name=C9E93_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22035;old_locus_tag=C9E93_22615 NZ_PYJV01000122.1 Protein Homology CDS 23407 24096 . + 0 ID=cds-WP_080181055.1;Parent=gene-C9E93_RS22035;Dbxref=GenBank:WP_080181055.1;Name=WP_080181055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=C9E93_RS22035;product=DUF1120 domain-containing protein;protein_id=WP_080181055.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 24144 24833 . + . ID=gene-C9E93_RS22040;Name=C9E93_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22040;old_locus_tag=C9E93_22620 NZ_PYJV01000122.1 Protein Homology CDS 24144 24833 . + 0 ID=cds-WP_000722275.1;Parent=gene-C9E93_RS22040;Dbxref=GenBank:WP_000722275.1;Name=WP_000722275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=C9E93_RS22040;product=DUF1120 domain-containing protein;protein_id=WP_000722275.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 24911 25618 . + . ID=gene-C9E93_RS22045;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=C9E93_RS22045;old_locus_tag=C9E93_22625 NZ_PYJV01000122.1 Protein Homology CDS 24911 25618 . + 0 ID=cds-WP_135370427.1;Parent=gene-C9E93_RS22045;Dbxref=GenBank:WP_135370427.1;Name=WP_135370427.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=C9E93_RS22045;product=fimbrial biogenesis chaperone StjC;protein_id=WP_135370427.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 25632 28040 . + . ID=gene-C9E93_RS22050;Name=C9E93_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22050;old_locus_tag=C9E93_22630 NZ_PYJV01000122.1 Protein Homology CDS 25632 28040 . + 0 ID=cds-WP_024798854.1;Parent=gene-C9E93_RS22050;Dbxref=GenBank:WP_024798854.1;Name=WP_024798854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=C9E93_RS22050;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_024798854.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 28037 28609 . + . ID=gene-C9E93_RS22055;Name=C9E93_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22055;old_locus_tag=C9E93_22635 NZ_PYJV01000122.1 Protein Homology CDS 28037 28609 . + 0 ID=cds-WP_000841604.1;Parent=gene-C9E93_RS22055;Dbxref=GenBank:WP_000841604.1;Name=WP_000841604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=C9E93_RS22055;product=outer membrane protein;protein_id=WP_000841604.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 28647 29366 . - . ID=gene-C9E93_RS22060;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9E93_RS22060;old_locus_tag=C9E93_22640 NZ_PYJV01000122.1 Protein Homology CDS 28647 29366 . - 0 ID=cds-WP_000224870.1;Parent=gene-C9E93_RS22060;Dbxref=GenBank:WP_000224870.1;Name=WP_000224870.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9E93_RS22060;product=purine-nucleoside phosphorylase;protein_id=WP_000224870.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 29576 30799 . - . ID=gene-C9E93_RS22065;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9E93_RS22065;old_locus_tag=C9E93_22645 NZ_PYJV01000122.1 Protein Homology CDS 29576 30799 . - 0 ID=cds-WP_000816454.1;Parent=gene-C9E93_RS22065;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9E93_RS22065;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 30851 32173 . - . ID=gene-C9E93_RS22070;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9E93_RS22070;old_locus_tag=C9E93_22650 NZ_PYJV01000122.1 Protein Homology CDS 30851 32173 . - 0 ID=cds-WP_000477838.1;Parent=gene-C9E93_RS22070;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9E93_RS22070;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 32297 33076 . - . ID=gene-C9E93_RS22075;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9E93_RS22075;old_locus_tag=C9E93_22655 NZ_PYJV01000122.1 Protein Homology CDS 32297 33076 . - 0 ID=cds-WP_001519713.1;Parent=gene-C9E93_RS22075;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9E93_RS22075;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 33336 34886 . + . ID=gene-C9E93_RS22080;Name=C9E93_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22080;old_locus_tag=C9E93_22660 NZ_PYJV01000122.1 Protein Homology CDS 33336 34886 . + 0 ID=cds-WP_001111671.1;Parent=gene-C9E93_RS22080;Dbxref=GenBank:WP_001111671.1;Name=WP_001111671.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9E93_RS22080;product=YjjI family glycine radical enzyme;protein_id=WP_001111671.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 34858 35721 . + . ID=gene-C9E93_RS22085;Name=C9E93_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22085;old_locus_tag=C9E93_22665 NZ_PYJV01000122.1 Protein Homology CDS 34858 35721 . + 0 ID=cds-WP_001064940.1;Parent=gene-C9E93_RS22085;Dbxref=GenBank:WP_001064940.1;Name=WP_001064940.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9E93_RS22085;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064940.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 35754 36527 . - . ID=gene-C9E93_RS22090;Name=C9E93_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22090;old_locus_tag=C9E93_22670 NZ_PYJV01000122.1 Protein Homology CDS 35754 36527 . - 0 ID=cds-WP_000119005.1;Parent=gene-C9E93_RS22090;Dbxref=GenBank:WP_000119005.1;Name=WP_000119005.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9E93_RS22090;product=metal-dependent hydrolase;protein_id=WP_000119005.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 36524 37597 . - . ID=gene-C9E93_RS22095;Name=C9E93_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22095;old_locus_tag=C9E93_22675 NZ_PYJV01000122.1 Protein Homology CDS 36524 37597 . - 0 ID=cds-WP_000531546.1;Parent=gene-C9E93_RS22095;Dbxref=GenBank:WP_000531546.1;Name=WP_000531546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9E93_RS22095;product=patatin-like phospholipase family protein;protein_id=WP_000531546.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 37721 37882 . - . ID=gene-C9E93_RS22100;Name=C9E93_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22100;old_locus_tag=C9E93_22680 NZ_PYJV01000122.1 Protein Homology CDS 37721 37882 . - 0 ID=cds-WP_000490276.1;Parent=gene-C9E93_RS22100;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9E93_RS22100;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 38011 38628 . - . ID=gene-C9E93_RS22105;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E93_RS22105;old_locus_tag=C9E93_22685 NZ_PYJV01000122.1 Protein Homology CDS 38011 38628 . - 0 ID=cds-WP_000178963.1;Parent=gene-C9E93_RS22105;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9E93_RS22105;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 39030 40619 . - . ID=gene-C9E93_RS22110;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9E93_RS22110;old_locus_tag=C9E93_22690 NZ_PYJV01000122.1 Protein Homology CDS 39030 40619 . - 0 ID=cds-WP_000175966.1;Parent=gene-C9E93_RS22110;Dbxref=GenBank:WP_000175966.1;Name=WP_000175966.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9E93_RS22110;product=peptide chain release factor 3;protein_id=WP_000175966.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 40711 41388 . - . ID=gene-C9E93_RS22115;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9E93_RS22115;old_locus_tag=C9E93_22695 NZ_PYJV01000122.1 Protein Homology CDS 40711 41388 . - 0 ID=cds-WP_000870686.1;Parent=gene-C9E93_RS22115;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9E93_RS22115;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 41410 41856 . - . ID=gene-C9E93_RS22120;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9E93_RS22120;old_locus_tag=C9E93_22700 NZ_PYJV01000122.1 Protein Homology CDS 41410 41856 . - 0 ID=cds-WP_001092438.1;Parent=gene-C9E93_RS22120;Dbxref=GenBank:WP_001092438.1;Name=WP_001092438.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9E93_RS22120;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092438.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 41801 42238 . - . ID=gene-C9E93_RS22125;Name=C9E93_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22125;old_locus_tag=C9E93_22705 NZ_PYJV01000122.1 Protein Homology CDS 41801 42238 . - 0 ID=cds-WP_000203996.1;Parent=gene-C9E93_RS22125;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9E93_RS22125;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_PYJV01000122.1 RefSeq gene 42341 43369 . + . ID=gene-C9E93_RS22130;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9E93_RS22130;old_locus_tag=C9E93_22710 NZ_PYJV01000122.1 Protein Homology CDS 42341 43369 . + 0 ID=cds-WP_001272273.1;Parent=gene-C9E93_RS22130;Dbxref=GenBank:WP_001272273.1;Name=WP_001272273.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9E93_RS22130;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272273.1;transl_table=11 ##sequence-region NZ_PYJV01000066.1 1 43252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000066.1 RefSeq region 1 43252 . + . ID=NZ_PYJV01000066.1:1..43252;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000066.1 RefSeq gene 1 337 . - . ID=gene-C9E93_RS10625;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9E93_RS10625;old_locus_tag=C9E93_10890;partial=true;start_range=.,1 NZ_PYJV01000066.1 Protein Homology CDS 1 337 . - 0 ID=cds-WP_031608497.1;Parent=gene-C9E93_RS10625;Dbxref=GenBank:WP_031608497.1;Name=WP_031608497.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=C9E93_RS10625;partial=true;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_031608497.1;start_range=.,1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 444 1055 . + . ID=gene-C9E93_RS10630;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9E93_RS10630;old_locus_tag=C9E93_10895 NZ_PYJV01000066.1 Protein Homology CDS 444 1055 . + 0 ID=cds-WP_001272784.1;Parent=gene-C9E93_RS10630;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9E93_RS10630;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_PYJV01000066.1 RefSeq pseudogene 1039 1182 . + . ID=gene-C9E93_RS23590;Name=C9E93_RS23590;end_range=1182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23590;partial=true;pseudo=true;start_range=.,1039 NZ_PYJV01000066.1 Protein Homology CDS 1039 1182 . + 0 ID=cds-C9E93_RS23590;Parent=gene-C9E93_RS23590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=1182,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9E93_RS23590;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,1039;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 1305 2318 . - . ID=gene-C9E93_RS10640;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9E93_RS10640;old_locus_tag=C9E93_10905 NZ_PYJV01000066.1 Protein Homology CDS 1305 2318 . - 0 ID=cds-WP_001264391.1;Parent=gene-C9E93_RS10640;Dbxref=GenBank:WP_001264391.1;Name=WP_001264391.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9E93_RS10640;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264391.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 2546 2761 . + . ID=gene-C9E93_RS10645;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9E93_RS10645;old_locus_tag=C9E93_10910 NZ_PYJV01000066.1 Protein Homology CDS 2546 2761 . + 0 ID=cds-WP_001144069.1;Parent=gene-C9E93_RS10645;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9E93_RS10645;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 2997 4742 . + . ID=gene-C9E93_RS10650;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9E93_RS10650;old_locus_tag=C9E93_10915 NZ_PYJV01000066.1 Protein Homology CDS 2997 4742 . + 0 ID=cds-WP_000918865.1;Parent=gene-C9E93_RS10650;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9E93_RS10650;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 4757 6739 . + . ID=gene-C9E93_RS10655;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9E93_RS10655;old_locus_tag=C9E93_10920 NZ_PYJV01000066.1 Protein Homology CDS 4757 6739 . + 0 ID=cds-WP_001120159.1;Parent=gene-C9E93_RS10655;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9E93_RS10655;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 6799 7362 . + . ID=gene-C9E93_RS10660;Name=C9E93_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10660;old_locus_tag=C9E93_10925 NZ_PYJV01000066.1 Protein Homology CDS 6799 7362 . + 0 ID=cds-WP_001183951.1;Parent=gene-C9E93_RS10660;Dbxref=GenBank:WP_001183951.1;Name=WP_001183951.1;Ontology_term=GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183949.1;locus_tag=C9E93_RS10660;product=NADAR family protein;protein_id=WP_001183951.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 7419 7925 . - . ID=gene-C9E93_RS10665;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9E93_RS10665;old_locus_tag=C9E93_10930 NZ_PYJV01000066.1 Protein Homology CDS 7419 7925 . - 0 ID=cds-WP_000237780.1;Parent=gene-C9E93_RS10665;Dbxref=GenBank:WP_000237780.1;Name=WP_000237780.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9E93_RS10665;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237780.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 8051 8126 . + . ID=gene-C9E93_RS10670;Name=C9E93_RS10670;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS10670;old_locus_tag=C9E93_10935 NZ_PYJV01000066.1 tRNAscan-SE tRNA 8051 8126 . + . ID=rna-C9E93_RS10670;Parent=gene-C9E93_RS10670;anticodon=(pos:8084..8086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS10670;product=tRNA-Ile NZ_PYJV01000066.1 tRNAscan-SE exon 8051 8126 . + . ID=exon-C9E93_RS10670-1;Parent=rna-C9E93_RS10670;anticodon=(pos:8084..8086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS10670;product=tRNA-Ile NZ_PYJV01000066.1 RefSeq gene 8206 8973 . - . ID=gene-C9E93_RS10675;Name=C9E93_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10675;old_locus_tag=C9E93_10940 NZ_PYJV01000066.1 Protein Homology CDS 8206 8973 . - 0 ID=cds-WP_135370036.1;Parent=gene-C9E93_RS10675;Dbxref=GenBank:WP_135370036.1;Name=WP_135370036.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9E93_RS10675;product=siderophore-interacting protein;protein_id=WP_135370036.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 9204 9851 . + . ID=gene-C9E93_RS10680;Name=C9E93_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10680;old_locus_tag=C9E93_10945 NZ_PYJV01000066.1 Protein Homology CDS 9204 9851 . + 0 ID=cds-WP_000983434.1;Parent=gene-C9E93_RS10680;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9E93_RS10680;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 9848 11416 . - . ID=gene-C9E93_RS10685;Name=C9E93_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10685;old_locus_tag=C9E93_10950 NZ_PYJV01000066.1 Protein Homology CDS 9848 11416 . - 0 ID=cds-WP_000478462.1;Parent=gene-C9E93_RS10685;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9E93_RS10685;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 11804 13324 . - . ID=gene-C9E93_RS10690;Name=C9E93_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10690;old_locus_tag=C9E93_10955 NZ_PYJV01000066.1 Protein Homology CDS 11804 13324 . - 0 ID=cds-WP_135370304.1;Parent=gene-C9E93_RS10690;Dbxref=GenBank:WP_135370304.1;Name=WP_135370304.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9E93_RS10690;product=methyl-accepting chemotaxis protein;protein_id=WP_135370304.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 13754 15133 . + . ID=gene-C9E93_RS10695;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=C9E93_RS10695;old_locus_tag=C9E93_10965 NZ_PYJV01000066.1 Protein Homology CDS 13754 15133 . + 0 ID=cds-WP_001520281.1;Parent=gene-C9E93_RS10695;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=C9E93_RS10695;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 15304 17322 . + . ID=gene-C9E93_RS10700;Name=C9E93_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10700;old_locus_tag=C9E93_10970 NZ_PYJV01000066.1 Protein Homology CDS 15304 17322 . + 0 ID=cds-WP_135370305.1;Parent=gene-C9E93_RS10700;Dbxref=GenBank:WP_135370305.1;Name=WP_135370305.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9E93_RS10700;product=oxidoreductase;protein_id=WP_135370305.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 17403 18539 . - . ID=gene-C9E93_RS10705;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9E93_RS10705;old_locus_tag=C9E93_10975 NZ_PYJV01000066.1 Protein Homology CDS 17403 18539 . - 0 ID=cds-WP_000019989.1;Parent=gene-C9E93_RS10705;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9E93_RS10705;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 18625 19122 . + . ID=gene-C9E93_RS10710;Name=C9E93_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10710;old_locus_tag=C9E93_10980 NZ_PYJV01000066.1 Protein Homology CDS 18625 19122 . + 0 ID=cds-WP_000202966.1;Parent=gene-C9E93_RS10710;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9E93_RS10710;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 19274 19966 . + . ID=gene-C9E93_RS10715;Name=C9E93_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10715;old_locus_tag=C9E93_10985 NZ_PYJV01000066.1 Protein Homology CDS 19274 19966 . + 0 ID=cds-WP_000951045.1;Parent=gene-C9E93_RS10715;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9E93_RS10715;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 20055 21053 . + . ID=gene-C9E93_RS10720;Name=C9E93_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10720;old_locus_tag=C9E93_10990 NZ_PYJV01000066.1 Protein Homology CDS 20055 21053 . + 0 ID=cds-WP_115276167.1;Parent=gene-C9E93_RS10720;Dbxref=GenBank:WP_115276167.1;Name=WP_115276167.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9E93_RS10720;product=Gfo/Idh/MocA family protein;protein_id=WP_115276167.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 21323 22291 . + . ID=gene-C9E93_RS10725;Name=C9E93_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10725;old_locus_tag=C9E93_10995 NZ_PYJV01000066.1 Protein Homology CDS 21323 22291 . + 0 ID=cds-WP_001098833.1;Parent=gene-C9E93_RS10725;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9E93_RS10725;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 22546 23790 . + . ID=gene-C9E93_RS10730;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9E93_RS10730;old_locus_tag=C9E93_11000 NZ_PYJV01000066.1 Protein Homology CDS 22546 23790 . + 0 ID=cds-WP_000235363.1;Parent=gene-C9E93_RS10730;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9E93_RS10730;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 24240 24902 . + . ID=gene-C9E93_RS10735;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9E93_RS10735;old_locus_tag=C9E93_11010 NZ_PYJV01000066.1 Protein Homology CDS 24240 24902 . + 0 ID=cds-WP_000422143.1;Parent=gene-C9E93_RS10735;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9E93_RS10735;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 24906 25289 . + . ID=gene-C9E93_RS10740;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9E93_RS10740;old_locus_tag=C9E93_11015 NZ_PYJV01000066.1 Protein Homology CDS 24906 25289 . + 0 ID=cds-WP_000917516.1;Parent=gene-C9E93_RS10740;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9E93_RS10740;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 25435 25803 . + . ID=gene-C9E93_RS10745;Name=C9E93_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10745;old_locus_tag=C9E93_11020 NZ_PYJV01000066.1 Protein Homology CDS 25435 25803 . + 0 ID=cds-WP_000877300.1;Parent=gene-C9E93_RS10745;Dbxref=GenBank:WP_000877300.1;Name=WP_000877300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9E93_RS10745;product=DUF1090 domain-containing protein;protein_id=WP_000877300.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 25845 26150 . + . ID=gene-C9E93_RS10750;Name=C9E93_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10750;old_locus_tag=C9E93_11025 NZ_PYJV01000066.1 Protein Homology CDS 25845 26150 . + 0 ID=cds-WP_000031219.1;Parent=gene-C9E93_RS10750;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9E93_RS10750;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 26153 26551 . + . ID=gene-C9E93_RS10755;Name=C9E93_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10755;old_locus_tag=C9E93_11030 NZ_PYJV01000066.1 Protein Homology CDS 26153 26551 . + 0 ID=cds-WP_000785626.1;Parent=gene-C9E93_RS10755;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9E93_RS10755;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 26548 26847 . + . ID=gene-C9E93_RS10760;Name=C9E93_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10760;old_locus_tag=C9E93_11035 NZ_PYJV01000066.1 Protein Homology CDS 26548 26847 . + 0 ID=cds-WP_000095496.1;Parent=gene-C9E93_RS10760;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9E93_RS10760;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 27085 27477 . + . ID=gene-C9E93_RS10765;Name=C9E93_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10765;old_locus_tag=C9E93_11040 NZ_PYJV01000066.1 Protein Homology CDS 27085 27477 . + 0 ID=cds-WP_001592732.1;Parent=gene-C9E93_RS10765;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9E93_RS10765;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 27545 28531 . + . ID=gene-C9E93_RS10770;Name=C9E93_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10770;old_locus_tag=C9E93_11045 NZ_PYJV01000066.1 Protein Homology CDS 27545 28531 . + 0 ID=cds-WP_023221320.1;Parent=gene-C9E93_RS10770;Dbxref=GenBank:WP_023221320.1;Name=WP_023221320.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9E93_RS10770;product=glutathione S-transferase family protein;protein_id=WP_023221320.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 28655 29020 . + . ID=gene-C9E93_RS10775;Name=C9E93_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10775;old_locus_tag=C9E93_11050 NZ_PYJV01000066.1 Protein Homology CDS 28655 29020 . + 0 ID=cds-WP_000384139.1;Parent=gene-C9E93_RS10775;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9E93_RS10775;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 29059 29955 . - . ID=gene-C9E93_RS10780;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS10780;old_locus_tag=C9E93_11055 NZ_PYJV01000066.1 Protein Homology CDS 29059 29955 . - 0 ID=cds-WP_001041026.1;Parent=gene-C9E93_RS10780;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9E93_RS10780;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 30060 30761 . + . ID=gene-C9E93_RS10785;Name=C9E93_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10785;old_locus_tag=C9E93_11060 NZ_PYJV01000066.1 Protein Homology CDS 30060 30761 . + 0 ID=cds-WP_135370026.1;Parent=gene-C9E93_RS10785;Dbxref=GenBank:WP_135370026.1;Name=WP_135370026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9E93_RS10785;product=pirin family protein;protein_id=WP_135370026.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 30785 30949 . + . ID=gene-C9E93_RS10790;Name=C9E93_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10790;old_locus_tag=C9E93_11065 NZ_PYJV01000066.1 Protein Homology CDS 30785 30949 . + 0 ID=cds-WP_023253911.1;Parent=gene-C9E93_RS10790;Dbxref=GenBank:WP_023253911.1;Name=WP_023253911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9E93_RS10790;product=hypothetical protein;protein_id=WP_023253911.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 31062 32372 . - . ID=gene-C9E93_RS10795;Name=C9E93_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10795;old_locus_tag=C9E93_11070 NZ_PYJV01000066.1 Protein Homology CDS 31062 32372 . - 0 ID=cds-WP_135370027.1;Parent=gene-C9E93_RS10795;Dbxref=GenBank:WP_135370027.1;Name=WP_135370027.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9E93_RS10795;product=L-cysteine desulfidase family protein;protein_id=WP_135370027.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 32398 33729 . - . ID=gene-C9E93_RS10800;Name=C9E93_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10800;old_locus_tag=C9E93_11075 NZ_PYJV01000066.1 Protein Homology CDS 32398 33729 . - 0 ID=cds-WP_000443189.1;Parent=gene-C9E93_RS10800;Dbxref=GenBank:WP_000443189.1;Name=WP_000443189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9E93_RS10800;product=amino acid permease;protein_id=WP_000443189.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 34044 35408 . - . ID=gene-C9E93_RS10805;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=C9E93_RS10805;old_locus_tag=C9E93_11080 NZ_PYJV01000066.1 Protein Homology CDS 34044 35408 . - 0 ID=cds-WP_000622075.1;Parent=gene-C9E93_RS10805;Dbxref=GenBank:WP_000622075.1;Name=WP_000622075.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9E93_RS10805;product=L-serine ammonia-lyase;protein_id=WP_000622075.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 35478 37772 . - . ID=gene-C9E93_RS10810;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E93_RS10810;old_locus_tag=C9E93_11085 NZ_PYJV01000066.1 Protein Homology CDS 35478 37772 . - 0 ID=cds-WP_000867313.1;Parent=gene-C9E93_RS10810;Dbxref=GenBank:WP_000867313.1;Name=WP_000867313.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9E93_RS10810;product=formate C-acetyltransferase;protein_id=WP_000867313.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 37806 39014 . - . ID=gene-C9E93_RS10815;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=C9E93_RS10815;old_locus_tag=C9E93_11090 NZ_PYJV01000066.1 Protein Homology CDS 37806 39014 . - 0 ID=cds-WP_135370365.1;Parent=gene-C9E93_RS10815;Dbxref=GenBank:WP_135370365.1;Name=WP_135370365.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9E93_RS10815;product=propionate kinase;protein_id=WP_135370365.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 39081 40412 . - . ID=gene-C9E93_RS10820;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=C9E93_RS10820;old_locus_tag=C9E93_11095 NZ_PYJV01000066.1 Protein Homology CDS 39081 40412 . - 0 ID=cds-WP_000108129.1;Parent=gene-C9E93_RS10820;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9E93_RS10820;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 40433 41422 . - . ID=gene-C9E93_RS10825;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9E93_RS10825;old_locus_tag=C9E93_11100 NZ_PYJV01000066.1 Protein Homology CDS 40433 41422 . - 0 ID=cds-WP_000548368.1;Parent=gene-C9E93_RS10825;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9E93_RS10825;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 41520 42458 . - . ID=gene-C9E93_RS10830;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9E93_RS10830;old_locus_tag=C9E93_11105 NZ_PYJV01000066.1 Protein Homology CDS 41520 42458 . - 0 ID=cds-WP_001094907.1;Parent=gene-C9E93_RS10830;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9E93_RS10830;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_PYJV01000066.1 RefSeq gene 42999 43252 . - . ID=gene-C9E93_RS23730;Name=C9E93_RS23730;end_range=43252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23730;old_locus_tag=C9E93_11115;partial=true NZ_PYJV01000066.1 GeneMarkS-2+ CDS 42999 43252 . - 2 ID=cds-WP_217804932.1;Parent=gene-C9E93_RS23730;Dbxref=GenBank:WP_217804932.1;Name=WP_217804932.1;end_range=43252,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23730;partial=true;product=hypothetical protein;protein_id=WP_217804932.1;transl_table=11 ##sequence-region NZ_PYJV01000050.1 1 42554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000050.1 RefSeq region 1 42554 . + . ID=NZ_PYJV01000050.1:1..42554;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000050.1 RefSeq gene 86 322 . - . ID=gene-C9E93_RS07635;Name=C9E93_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07635;old_locus_tag=C9E93_07870 NZ_PYJV01000050.1 Protein Homology CDS 86 322 . - 0 ID=cds-WP_000941877.1;Parent=gene-C9E93_RS07635;Dbxref=GenBank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9E93_RS07635;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 573 1637 . + . ID=gene-C9E93_RS07640;Name=C9E93_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07640;old_locus_tag=C9E93_07875 NZ_PYJV01000050.1 Protein Homology CDS 573 1637 . + 0 ID=cds-WP_000211207.1;Parent=gene-C9E93_RS07640;Dbxref=GenBank:WP_000211207.1;Name=WP_000211207.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9E93_RS07640;product=GGDEF domain-containing protein;protein_id=WP_000211207.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 1758 2546 . + . ID=gene-C9E93_RS07645;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9E93_RS07645;old_locus_tag=C9E93_07880 NZ_PYJV01000050.1 Protein Homology CDS 1758 2546 . + 0 ID=cds-WP_135370426.1;Parent=gene-C9E93_RS07645;Dbxref=GenBank:WP_135370426.1;Name=WP_135370426.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9E93_RS07645;product=siderophore-iron reductase FhuF;protein_id=WP_135370426.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 2697 3155 . + . ID=gene-C9E93_RS07650;Name=C9E93_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07650;old_locus_tag=C9E93_07885 NZ_PYJV01000050.1 Protein Homology CDS 2697 3155 . + 0 ID=cds-WP_000058276.1;Parent=gene-C9E93_RS07650;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9E93_RS07650;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 3206 3880 . - . ID=gene-C9E93_RS07655;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9E93_RS07655;old_locus_tag=C9E93_07890 NZ_PYJV01000050.1 Protein Homology CDS 3206 3880 . - 0 ID=cds-WP_000431547.1;Parent=gene-C9E93_RS07655;Dbxref=GenBank:WP_000431547.1;Name=WP_000431547.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9E93_RS07655;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431547.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 3841 4566 . - . ID=gene-C9E93_RS07660;Name=C9E93_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07660;old_locus_tag=C9E93_07895 NZ_PYJV01000050.1 Protein Homology CDS 3841 4566 . - 0 ID=cds-WP_000936652.1;Parent=gene-C9E93_RS07660;Dbxref=GenBank:WP_000936652.1;Name=WP_000936652.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9E93_RS07660;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 5279 6055 . + . ID=gene-C9E93_RS07665;Name=C9E93_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07665;old_locus_tag=C9E93_07900 NZ_PYJV01000050.1 Protein Homology CDS 5279 6055 . + 0 ID=cds-WP_001747536.1;Parent=gene-C9E93_RS07665;Dbxref=GenBank:WP_001747536.1;Name=WP_001747536.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9E93_RS07665;product=threonine/serine ThrE exporter family protein;protein_id=WP_001747536.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 6046 6519 . + . ID=gene-C9E93_RS07670;Name=C9E93_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07670;old_locus_tag=C9E93_07905 NZ_PYJV01000050.1 Protein Homology CDS 6046 6519 . + 0 ID=cds-WP_000511329.1;Parent=gene-C9E93_RS07670;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9E93_RS07670;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 6612 7151 . + . ID=gene-C9E93_RS07675;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9E93_RS07675;old_locus_tag=C9E93_07910 NZ_PYJV01000050.1 Protein Homology CDS 6612 7151 . + 0 ID=cds-WP_000098573.1;Parent=gene-C9E93_RS07675;Dbxref=GenBank:WP_000098573.1;Name=WP_000098573.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9E93_RS07675;product=primosomal protein DnaT;protein_id=WP_000098573.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 7154 7891 . + . ID=gene-C9E93_RS07680;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9E93_RS07680;old_locus_tag=C9E93_07915 NZ_PYJV01000050.1 Protein Homology CDS 7154 7891 . + 0 ID=cds-WP_000799924.1;Parent=gene-C9E93_RS07680;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9E93_RS07680;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 7949 8410 . + . ID=gene-C9E93_RS07685;Name=C9E93_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07685;old_locus_tag=C9E93_07920 NZ_PYJV01000050.1 Protein Homology CDS 7949 8410 . + 0 ID=cds-WP_001090314.1;Parent=gene-C9E93_RS07685;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9E93_RS07685;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 8693 10984 . + . ID=gene-C9E93_RS07690;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9E93_RS07690;old_locus_tag=C9E93_07925 NZ_PYJV01000050.1 Protein Homology CDS 8693 10984 . + 0 ID=cds-WP_135370407.1;Parent=gene-C9E93_RS07690;Dbxref=GenBank:WP_135370407.1;Name=WP_135370407.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9E93_RS07690;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_135370407.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 11118 12128 . - . ID=gene-C9E93_RS07695;Name=C9E93_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07695;old_locus_tag=C9E93_07930 NZ_PYJV01000050.1 Protein Homology CDS 11118 12128 . - 0 ID=cds-WP_000900307.1;Parent=gene-C9E93_RS07695;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=C9E93_RS07695;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 12146 13207 . - . ID=gene-C9E93_RS07700;Name=C9E93_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07700;old_locus_tag=C9E93_07935 NZ_PYJV01000050.1 Protein Homology CDS 12146 13207 . - 0 ID=cds-WP_020898341.1;Parent=gene-C9E93_RS07700;Dbxref=GenBank:WP_020898341.1;Name=WP_020898341.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9E93_RS07700;product=SIS domain-containing protein;protein_id=WP_020898341.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 13220 14068 . - . ID=gene-C9E93_RS07705;Name=C9E93_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07705;old_locus_tag=C9E93_07940 NZ_PYJV01000050.1 Protein Homology CDS 13220 14068 . - 0 ID=cds-WP_000178065.1;Parent=gene-C9E93_RS07705;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=C9E93_RS07705;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 14046 14825 . - . ID=gene-C9E93_RS07710;Name=C9E93_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07710;old_locus_tag=C9E93_07945 NZ_PYJV01000050.1 Protein Homology CDS 14046 14825 . - 0 ID=cds-WP_000228866.1;Parent=gene-C9E93_RS07710;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9E93_RS07710;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 14851 15312 . - . ID=gene-C9E93_RS07715;Name=C9E93_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07715;old_locus_tag=C9E93_07950 NZ_PYJV01000050.1 Protein Homology CDS 14851 15312 . - 0 ID=cds-WP_000634729.1;Parent=gene-C9E93_RS07715;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9E93_RS07715;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 15327 15749 . - . ID=gene-C9E93_RS07720;Name=C9E93_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07720;old_locus_tag=C9E93_07955 NZ_PYJV01000050.1 Protein Homology CDS 15327 15749 . - 0 ID=cds-WP_000820693.1;Parent=gene-C9E93_RS07720;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9E93_RS07720;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 15851 18616 . - . ID=gene-C9E93_RS07725;Name=C9E93_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07725;old_locus_tag=C9E93_07960 NZ_PYJV01000050.1 Protein Homology CDS 15851 18616 . - 0 ID=cds-WP_001224204.1;Parent=gene-C9E93_RS07725;Dbxref=GenBank:WP_001224204.1;Name=WP_001224204.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9E93_RS07725;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001224204.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 18939 20600 . - . ID=gene-C9E93_RS07735;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9E93_RS07735;old_locus_tag=C9E93_07965 NZ_PYJV01000050.1 Protein Homology CDS 18939 20600 . - 0 ID=cds-WP_000919511.1;Parent=gene-C9E93_RS07735;Dbxref=GenBank:WP_000919511.1;Name=WP_000919511.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9E93_RS07735;product=methyl-accepting chemotaxis protein;protein_id=WP_000919511.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 20967 23117 . + . ID=gene-C9E93_RS07740;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9E93_RS07740;old_locus_tag=C9E93_07970 NZ_PYJV01000050.1 Protein Homology CDS 20967 23117 . + 0 ID=cds-WP_000379929.1;Parent=gene-C9E93_RS07740;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9E93_RS07740;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 23212 23415 . + . ID=gene-C9E93_RS07745;Name=C9E93_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07745;old_locus_tag=C9E93_07975 NZ_PYJV01000050.1 Protein Homology CDS 23212 23415 . + 0 ID=cds-WP_000460616.1;Parent=gene-C9E93_RS07745;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9E93_RS07745;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 23426 24382 . + . ID=gene-C9E93_RS07750;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9E93_RS07750;old_locus_tag=C9E93_07980 NZ_PYJV01000050.1 Protein Homology CDS 23426 24382 . + 0 ID=cds-WP_000187835.1;Parent=gene-C9E93_RS07750;Dbxref=GenBank:WP_000187835.1;Name=WP_000187835.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9E93_RS07750;product=GTPase;protein_id=WP_000187835.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 24498 25466 . - . ID=gene-C9E93_RS07755;Name=C9E93_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07755;old_locus_tag=C9E93_07985 NZ_PYJV01000050.1 Protein Homology CDS 24498 25466 . - 0 ID=cds-WP_135370406.1;Parent=gene-C9E93_RS07755;Dbxref=GenBank:WP_135370406.1;Name=WP_135370406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9E93_RS07755;product=hypothetical protein;protein_id=WP_135370406.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 25608 28037 . + . ID=gene-C9E93_RS07760;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=C9E93_RS07760;old_locus_tag=C9E93_07990 NZ_PYJV01000050.1 Protein Homology CDS 25608 28037 . + 0 ID=cds-WP_000774451.1;Parent=gene-C9E93_RS07760;Dbxref=GenBank:WP_000774451.1;Name=WP_000774451.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9E93_RS07760;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_000774451.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 28108 29577 . + . ID=gene-C9E93_RS07765;Name=C9E93_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07765;old_locus_tag=C9E93_07995 NZ_PYJV01000050.1 Protein Homology CDS 28108 29577 . + 0 ID=cds-WP_080204212.1;Parent=gene-C9E93_RS07765;Dbxref=GenBank:WP_080204212.1;Name=WP_080204212.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=C9E93_RS07765;product=N-6 DNA methylase;protein_id=WP_080204212.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 29577 31367 . + . ID=gene-C9E93_RS07770;Name=C9E93_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07770;old_locus_tag=C9E93_08000 NZ_PYJV01000050.1 Protein Homology CDS 29577 31367 . + 0 ID=cds-WP_135370405.1;Parent=gene-C9E93_RS07770;Dbxref=GenBank:WP_135370405.1;Name=WP_135370405.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110089.1;locus_tag=C9E93_RS07770;product=restriction endonuclease subunit S;protein_id=WP_135370405.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 31584 31904 . + . ID=gene-C9E93_RS07775;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9E93_RS07775;old_locus_tag=C9E93_08005 NZ_PYJV01000050.1 Protein Homology CDS 31584 31904 . + 0 ID=cds-WP_031605810.1;Parent=gene-C9E93_RS07775;Dbxref=GenBank:WP_031605810.1;Name=WP_031605810.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=C9E93_RS07775;product=endoribonuclease SymE;protein_id=WP_031605810.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 31949 33802 . - . ID=gene-C9E93_RS07780;Name=C9E93_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07780;old_locus_tag=C9E93_08010 NZ_PYJV01000050.1 Protein Homology CDS 31949 33802 . - 0 ID=cds-WP_000102839.1;Parent=gene-C9E93_RS07780;Dbxref=GenBank:WP_000102839.1;Name=WP_000102839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9E93_RS07780;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_000102839.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 33938 34858 . + . ID=gene-C9E93_RS07785;Name=C9E93_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07785;old_locus_tag=C9E93_08015 NZ_PYJV01000050.1 Protein Homology CDS 33938 34858 . + 0 ID=cds-WP_115409739.1;Parent=gene-C9E93_RS07785;Dbxref=GenBank:WP_115409739.1;Name=WP_115409739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9E93_RS07785;product=DUF5655 domain-containing protein;protein_id=WP_115409739.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 34935 35099 . - . ID=gene-C9E93_RS07790;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=C9E93_RS07790;old_locus_tag=C9E93_08020 NZ_PYJV01000050.1 Protein Homology CDS 34935 35099 . - 0 ID=cds-WP_000397917.1;Parent=gene-C9E93_RS07790;Dbxref=GenBank:WP_000397917.1;Name=WP_000397917.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9E93_RS07790;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397917.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 35066 35209 . + . ID=gene-C9E93_RS07795;Name=C9E93_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07795;old_locus_tag=C9E93_08025 NZ_PYJV01000050.1 Protein Homology CDS 35066 35209 . + 0 ID=cds-WP_031605808.1;Parent=gene-C9E93_RS07795;Dbxref=GenBank:WP_031605808.1;Name=WP_031605808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9E93_RS07795;product=hypothetical protein;protein_id=WP_031605808.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 35304 36674 . - . ID=gene-C9E93_RS07800;Name=C9E93_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07800;old_locus_tag=C9E93_08030 NZ_PYJV01000050.1 Protein Homology CDS 35304 36674 . - 0 ID=cds-WP_135370404.1;Parent=gene-C9E93_RS07800;Dbxref=GenBank:WP_135370404.1;Name=WP_135370404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9E93_RS07800;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135370404.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 36855 37820 . - . ID=gene-C9E93_RS07805;Name=C9E93_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07805;old_locus_tag=C9E93_08035 NZ_PYJV01000050.1 Protein Homology CDS 36855 37820 . - 0 ID=cds-WP_000749991.1;Parent=gene-C9E93_RS07805;Dbxref=GenBank:WP_000749991.1;Name=WP_000749991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9E93_RS07805;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749991.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 38299 39540 . + . ID=gene-C9E93_RS07810;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9E93_RS07810;old_locus_tag=C9E93_08040 NZ_PYJV01000050.1 Protein Homology CDS 38299 39540 . + 0 ID=cds-WP_001188918.1;Parent=gene-C9E93_RS07810;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9E93_RS07810;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 39627 40898 . + . ID=gene-C9E93_RS07815;Name=C9E93_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07815;old_locus_tag=C9E93_08045 NZ_PYJV01000050.1 Protein Homology CDS 39627 40898 . + 0 ID=cds-WP_001033033.1;Parent=gene-C9E93_RS07815;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9E93_RS07815;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11 NZ_PYJV01000050.1 RefSeq gene 41118 42302 . + . ID=gene-C9E93_RS07820;Name=C9E93_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07820;old_locus_tag=C9E93_08050 NZ_PYJV01000050.1 Protein Homology CDS 41118 42302 . + 0 ID=cds-WP_023237583.1;Parent=gene-C9E93_RS07820;Dbxref=GenBank:WP_023237583.1;Name=WP_023237583.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9E93_RS07820;product=MFS transporter;protein_id=WP_023237583.1;transl_table=11 ##sequence-region NZ_PYJV01000044.1 1 42402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000044.1 RefSeq region 1 42402 . + . ID=NZ_PYJV01000044.1:1..42402;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000044.1 RefSeq gene 180 1829 . - . ID=gene-C9E93_RS06690;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9E93_RS06690;old_locus_tag=C9E93_06910 NZ_PYJV01000044.1 Protein Homology CDS 180 1829 . - 0 ID=cds-WP_000790024.1;Parent=gene-C9E93_RS06690;Dbxref=GenBank:WP_000790024.1;Name=WP_000790024.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9E93_RS06690;product=glucose-6-phosphate isomerase;protein_id=WP_000790024.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 2174 3523 . + . ID=gene-C9E93_RS06695;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E93_RS06695;old_locus_tag=C9E93_06915 NZ_PYJV01000044.1 Protein Homology CDS 2174 3523 . + 0 ID=cds-WP_000136400.1;Parent=gene-C9E93_RS06695;Dbxref=GenBank:WP_000136400.1;Name=WP_000136400.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9E93_RS06695;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136400.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 3654 4001 . - . ID=gene-C9E93_RS06700;Name=C9E93_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06700;old_locus_tag=C9E93_06920 NZ_PYJV01000044.1 Protein Homology CDS 3654 4001 . - 0 ID=cds-WP_000615248.1;Parent=gene-C9E93_RS06700;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9E93_RS06700;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 4577 4864 . + . ID=gene-C9E93_RS06705;Name=C9E93_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06705;old_locus_tag=C9E93_06925 NZ_PYJV01000044.1 Protein Homology CDS 4577 4864 . + 0 ID=cds-WP_001226440.1;Parent=gene-C9E93_RS06705;Dbxref=GenBank:WP_001226440.1;Name=WP_001226440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9E93_RS06705;product=putative holin;protein_id=WP_001226440.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 4867 5472 . + . ID=gene-C9E93_RS06710;Name=C9E93_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06710;old_locus_tag=C9E93_06930 NZ_PYJV01000044.1 Protein Homology CDS 4867 5472 . + 0 ID=cds-WP_001270438.1;Parent=gene-C9E93_RS06710;Dbxref=GenBank:WP_001270438.1;Name=WP_001270438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9E93_RS06710;product=lytic transglycosylase domain-containing protein;protein_id=WP_001270438.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 5485 5799 . + . ID=gene-C9E93_RS06715;Name=C9E93_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06715;old_locus_tag=C9E93_06935 NZ_PYJV01000044.1 Protein Homology CDS 5485 5799 . + 0 ID=cds-WP_000777266.1;Parent=gene-C9E93_RS06715;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9E93_RS06715;product=membrane protein;protein_id=WP_000777266.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 5959 6414 . + . ID=gene-C9E93_RS06720;Name=C9E93_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06720;old_locus_tag=C9E93_06940 NZ_PYJV01000044.1 Protein Homology CDS 5959 6414 . + 0 ID=cds-WP_135369992.1;Parent=gene-C9E93_RS06720;Dbxref=GenBank:WP_135369992.1;Name=WP_135369992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9E93_RS06720;product=Gp37 family protein;protein_id=WP_135369992.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 6411 6608 . + . ID=gene-C9E93_RS06725;Name=C9E93_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06725;old_locus_tag=C9E93_06945 NZ_PYJV01000044.1 Protein Homology CDS 6411 6608 . + 0 ID=cds-WP_080212881.1;Parent=gene-C9E93_RS06725;Dbxref=GenBank:WP_080212881.1;Name=WP_080212881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9E93_RS06725;product=hypothetical protein;protein_id=WP_080212881.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 6598 8025 . + . ID=gene-C9E93_RS06730;Name=C9E93_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06730;old_locus_tag=C9E93_06950 NZ_PYJV01000044.1 Protein Homology CDS 6598 8025 . + 0 ID=cds-WP_135369991.1;Parent=gene-C9E93_RS06730;Dbxref=GenBank:WP_135369991.1;Name=WP_135369991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=C9E93_RS06730;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_135369991.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 8025 8549 . + . ID=gene-C9E93_RS06735;Name=C9E93_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06735;old_locus_tag=C9E93_06955 NZ_PYJV01000044.1 Protein Homology CDS 8025 8549 . + 0 ID=cds-WP_135369990.1;Parent=gene-C9E93_RS06735;Dbxref=GenBank:WP_135369990.1;Name=WP_135369990.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9E93_RS06735;product=phage major tail tube protein;protein_id=WP_135369990.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 8601 8918 . + . ID=gene-C9E93_RS06740;Name=C9E93_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06740;old_locus_tag=C9E93_06960 NZ_PYJV01000044.1 Protein Homology CDS 8601 8918 . + 0 ID=cds-WP_001003640.1;Parent=gene-C9E93_RS06740;Dbxref=GenBank:WP_001003640.1;Name=WP_001003640.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9E93_RS06740;product=phage tail assembly protein;protein_id=WP_001003640.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 8878 9006 . + . ID=gene-C9E93_RS06745;Name=C9E93_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06745;old_locus_tag=C9E93_06965 NZ_PYJV01000044.1 Protein Homology CDS 8878 9006 . + 0 ID=cds-WP_135369989.1;Parent=gene-C9E93_RS06745;Dbxref=GenBank:WP_135369989.1;Name=WP_135369989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9E93_RS06745;product=GpE family phage tail protein;protein_id=WP_135369989.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 9100 11454 . + . ID=gene-C9E93_RS06750;Name=C9E93_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06750;old_locus_tag=C9E93_06970 NZ_PYJV01000044.1 Protein Homology CDS 9100 11454 . + 0 ID=cds-WP_135369988.1;Parent=gene-C9E93_RS06750;Dbxref=GenBank:WP_135369988.1;Name=WP_135369988.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9E93_RS06750;product=phage tail tape measure protein;protein_id=WP_135369988.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 11454 12407 . + . ID=gene-C9E93_RS06755;Name=C9E93_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06755;old_locus_tag=C9E93_06975 NZ_PYJV01000044.1 Protein Homology CDS 11454 12407 . + 0 ID=cds-WP_000271425.1;Parent=gene-C9E93_RS06755;Dbxref=GenBank:WP_000271425.1;Name=WP_000271425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9E93_RS06755;product=phage tail protein;protein_id=WP_000271425.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 12407 12616 . + . ID=gene-C9E93_RS06760;Name=C9E93_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06760;old_locus_tag=C9E93_06980 NZ_PYJV01000044.1 Protein Homology CDS 12407 12616 . + 0 ID=cds-WP_001269716.1;Parent=gene-C9E93_RS06760;Dbxref=GenBank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9E93_RS06760;product=tail protein X;protein_id=WP_001269716.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 12604 13647 . + . ID=gene-C9E93_RS06765;Name=C9E93_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06765;old_locus_tag=C9E93_06985 NZ_PYJV01000044.1 Protein Homology CDS 12604 13647 . + 0 ID=cds-WP_135369987.1;Parent=gene-C9E93_RS06765;Dbxref=GenBank:WP_135369987.1;Name=WP_135369987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9E93_RS06765;product=phage late control D family protein;protein_id=WP_135369987.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 13657 14379 . + . ID=gene-C9E93_RS06770;Name=C9E93_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06770;old_locus_tag=C9E93_06990 NZ_PYJV01000044.1 Protein Homology CDS 13657 14379 . + 0 ID=cds-WP_135369986.1;Parent=gene-C9E93_RS06770;Dbxref=GenBank:WP_135369986.1;Name=WP_135369986.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9E93_RS06770;product=phage baseplate assembly protein V;protein_id=WP_135369986.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 14706 15068 . + . ID=gene-C9E93_RS06780;Name=C9E93_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06780;old_locus_tag=C9E93_07000 NZ_PYJV01000044.1 Protein Homology CDS 14706 15068 . + 0 ID=cds-WP_000593184.1;Parent=gene-C9E93_RS06780;Dbxref=GenBank:WP_000593184.1;Name=WP_000593184.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9E93_RS06780;product=GtrA family protein;protein_id=WP_000593184.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 15065 15994 . + . ID=gene-C9E93_RS06785;Name=C9E93_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06785;old_locus_tag=C9E93_07005 NZ_PYJV01000044.1 Protein Homology CDS 15065 15994 . + 0 ID=cds-WP_023137582.1;Parent=gene-C9E93_RS06785;Dbxref=GenBank:WP_023137582.1;Name=WP_023137582.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9E93_RS06785;product=glycosyltransferase family 2 protein;protein_id=WP_023137582.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 15994 17541 . + . ID=gene-C9E93_RS06790;Name=C9E93_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06790;old_locus_tag=C9E93_07010 NZ_PYJV01000044.1 Protein Homology CDS 15994 17541 . + 0 ID=cds-WP_135369985.1;Parent=gene-C9E93_RS06790;Dbxref=GenBank:WP_135369985.1;Name=WP_135369985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9E93_RS06790;product=DUF6056 family protein;protein_id=WP_135369985.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 17705 18064 . + . ID=gene-C9E93_RS06795;Name=C9E93_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06795;old_locus_tag=C9E93_07015 NZ_PYJV01000044.1 Protein Homology CDS 17705 18064 . + 0 ID=cds-WP_001093502.1;Parent=gene-C9E93_RS06795;Dbxref=GenBank:WP_001093502.1;Name=WP_001093502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9E93_RS06795;product=GPW/gp25 family protein;protein_id=WP_001093502.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 18055 19170 . + . ID=gene-C9E93_RS06800;Name=C9E93_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06800;old_locus_tag=C9E93_07020 NZ_PYJV01000044.1 Protein Homology CDS 18055 19170 . + 0 ID=cds-WP_135369984.1;Parent=gene-C9E93_RS06800;Dbxref=GenBank:WP_135369984.1;Name=WP_135369984.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9E93_RS06800;product=baseplate assembly protein;protein_id=WP_135369984.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 19163 19795 . + . ID=gene-C9E93_RS06805;Name=C9E93_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06805;old_locus_tag=C9E93_07025 NZ_PYJV01000044.1 Protein Homology CDS 19163 19795 . + 0 ID=cds-WP_000359503.1;Parent=gene-C9E93_RS06805;Dbxref=GenBank:WP_000359503.1;Name=WP_000359503.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9E93_RS06805;product=phage tail protein I;protein_id=WP_000359503.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 19798 21567 . + . ID=gene-C9E93_RS06810;Name=C9E93_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06810;old_locus_tag=C9E93_07030 NZ_PYJV01000044.1 Protein Homology CDS 19798 21567 . + 0 ID=cds-WP_135369983.1;Parent=gene-C9E93_RS06810;Dbxref=GenBank:WP_135369983.1;Name=WP_135369983.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894561.1;locus_tag=C9E93_RS06810;product=tail fiber protein;protein_id=WP_135369983.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 21572 22177 . + . ID=gene-C9E93_RS06815;Name=C9E93_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06815;old_locus_tag=C9E93_07035 NZ_PYJV01000044.1 Protein Homology CDS 21572 22177 . + 0 ID=cds-WP_135369982.1;Parent=gene-C9E93_RS06815;Dbxref=GenBank:WP_135369982.1;Name=WP_135369982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463064.1;locus_tag=C9E93_RS06815;product=DUF4376 domain-containing protein;protein_id=WP_135369982.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 22174 22629 . + . ID=gene-C9E93_RS06820;Name=C9E93_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06820;old_locus_tag=C9E93_07040 NZ_PYJV01000044.1 Protein Homology CDS 22174 22629 . + 0 ID=cds-WP_023203255.1;Parent=gene-C9E93_RS06820;Dbxref=GenBank:WP_023203255.1;Name=WP_023203255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9E93_RS06820;product=hypothetical protein;protein_id=WP_023203255.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 22881 23171 . + . ID=gene-C9E93_RS06825;Name=C9E93_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06825;old_locus_tag=C9E93_07045 NZ_PYJV01000044.1 Protein Homology CDS 22881 23171 . + 0 ID=cds-WP_135369981.1;Parent=gene-C9E93_RS06825;Dbxref=GenBank:WP_135369981.1;Name=WP_135369981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9E93_RS06825;product=hypothetical protein;protein_id=WP_135369981.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 23368 24096 . + . ID=gene-C9E93_RS06830;Name=C9E93_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06830;old_locus_tag=C9E93_07050 NZ_PYJV01000044.1 Protein Homology CDS 23368 24096 . + 0 ID=cds-WP_023200869.1;Parent=gene-C9E93_RS06830;Dbxref=GenBank:WP_023200869.1;Name=WP_023200869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9E93_RS06830;product=hypothetical protein;protein_id=WP_023200869.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 24358 25299 . + . ID=gene-C9E93_RS06835;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9E93_RS06835;old_locus_tag=C9E93_07055 NZ_PYJV01000044.1 Protein Homology CDS 24358 25299 . + 0 ID=cds-WP_135370051.1;Parent=gene-C9E93_RS06835;Dbxref=GenBank:WP_135370051.1;Name=WP_135370051.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9E93_RS06835;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_135370051.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 25397 25669 . + . ID=gene-C9E93_RS06840;Name=C9E93_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06840;old_locus_tag=C9E93_07060 NZ_PYJV01000044.1 Protein Homology CDS 25397 25669 . + 0 ID=cds-WP_001207628.1;Parent=gene-C9E93_RS06840;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9E93_RS06840;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 25666 26535 . - . ID=gene-C9E93_RS06845;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9E93_RS06845;old_locus_tag=C9E93_07065 NZ_PYJV01000044.1 Protein Homology CDS 25666 26535 . - 0 ID=cds-WP_000954618.1;Parent=gene-C9E93_RS06845;Dbxref=GenBank:WP_000954618.1;Name=WP_000954618.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9E93_RS06845;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954618.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 26582 27121 . - . ID=gene-C9E93_RS06850;Name=C9E93_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06850;old_locus_tag=C9E93_07070 NZ_PYJV01000044.1 Protein Homology CDS 26582 27121 . - 0 ID=cds-WP_001096724.1;Parent=gene-C9E93_RS06850;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9E93_RS06850;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 27156 27257 . - . ID=gene-C9E93_RS06855;Name=C9E93_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06855;old_locus_tag=C9E93_07075 NZ_PYJV01000044.1 Protein Homology CDS 27156 27257 . - 0 ID=cds-WP_135370052.1;Parent=gene-C9E93_RS06855;Dbxref=GenBank:WP_135370052.1;Name=WP_135370052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9E93_RS06855;product=hypothetical protein;protein_id=WP_135370052.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 27329 28018 . + . ID=gene-C9E93_RS06860;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9E93_RS06860;old_locus_tag=C9E93_07080 NZ_PYJV01000044.1 Protein Homology CDS 27329 28018 . + 0 ID=cds-WP_000421776.1;Parent=gene-C9E93_RS06860;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9E93_RS06860;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 28094 29725 . - . ID=gene-C9E93_RS06865;Name=C9E93_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06865;old_locus_tag=C9E93_07085 NZ_PYJV01000044.1 Protein Homology CDS 28094 29725 . - 0 ID=cds-WP_000956811.1;Parent=gene-C9E93_RS06865;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9E93_RS06865;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 29992 33675 . - . ID=gene-C9E93_RS06870;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9E93_RS06870;old_locus_tag=C9E93_07090 NZ_PYJV01000044.1 Protein Homology CDS 29992 33675 . - 0 ID=cds-WP_135370053.1;Parent=gene-C9E93_RS06870;Dbxref=GenBank:WP_135370053.1;Name=WP_135370053.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9E93_RS06870;product=methionine synthase;protein_id=WP_135370053.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 33979 34803 . + . ID=gene-C9E93_RS06875;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9E93_RS06875;old_locus_tag=C9E93_07095 NZ_PYJV01000044.1 Protein Homology CDS 33979 34803 . + 0 ID=cds-WP_000226430.1;Parent=gene-C9E93_RS06875;Dbxref=GenBank:WP_000226430.1;Name=WP_000226430.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9E93_RS06875;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226430.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 34814 35221 . + . ID=gene-C9E93_RS06880;Name=C9E93_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06880;old_locus_tag=C9E93_07100 NZ_PYJV01000044.1 Protein Homology CDS 34814 35221 . + 0 ID=cds-WP_010989091.1;Parent=gene-C9E93_RS06880;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9E93_RS06880;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 35185 36936 . - . ID=gene-C9E93_RS06885;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9E93_RS06885;old_locus_tag=C9E93_07105 NZ_PYJV01000044.1 Protein Homology CDS 35185 36936 . - 0 ID=cds-WP_135370054.1;Parent=gene-C9E93_RS06885;Dbxref=GenBank:WP_135370054.1;Name=WP_135370054.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9E93_RS06885;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_135370054.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 37038 38342 . - . ID=gene-C9E93_RS06890;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9E93_RS06890;old_locus_tag=C9E93_07110 NZ_PYJV01000044.1 Protein Homology CDS 37038 38342 . - 0 ID=cds-WP_000857884.1;Parent=gene-C9E93_RS06890;Dbxref=GenBank:WP_000857884.1;Name=WP_000857884.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9E93_RS06890;product=isocitrate lyase;protein_id=WP_000857884.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 38374 39975 . - . ID=gene-C9E93_RS06895;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9E93_RS06895;old_locus_tag=C9E93_07115 NZ_PYJV01000044.1 Protein Homology CDS 38374 39975 . - 0 ID=cds-WP_001069371.1;Parent=gene-C9E93_RS06895;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9E93_RS06895;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 40244 41173 . - . ID=gene-C9E93_RS06900;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9E93_RS06900;old_locus_tag=C9E93_07120 NZ_PYJV01000044.1 Protein Homology CDS 40244 41173 . - 0 ID=cds-WP_001122767.1;Parent=gene-C9E93_RS06900;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9E93_RS06900;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 41330 41767 . + . ID=gene-C9E93_RS06905;Name=C9E93_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06905;old_locus_tag=C9E93_07125 NZ_PYJV01000044.1 Protein Homology CDS 41330 41767 . + 0 ID=cds-WP_000973248.1;Parent=gene-C9E93_RS06905;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9E93_RS06905;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_PYJV01000044.1 RefSeq gene 42062 42177 . - . ID=gene-C9E93_RS06910;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E93_RS06910;old_locus_tag=C9E93_07130 NZ_PYJV01000044.1 cmsearch rRNA 42062 42177 . - . ID=rna-C9E93_RS06910;Parent=gene-C9E93_RS06910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS06910;product=5S ribosomal RNA NZ_PYJV01000044.1 cmsearch exon 42062 42177 . - . ID=exon-C9E93_RS06910-1;Parent=rna-C9E93_RS06910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS06910;product=5S ribosomal RNA ##sequence-region NZ_PYJV01000049.1 1 41915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000049.1 RefSeq region 1 41915 . + . ID=NZ_PYJV01000049.1:1..41915;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000049.1 RefSeq gene 3 79 . + . ID=gene-C9E93_RS07400;Name=C9E93_RS07400;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS07400;old_locus_tag=C9E93_07635 NZ_PYJV01000049.1 tRNAscan-SE tRNA 3 79 . + . ID=rna-C9E93_RS07400;Parent=gene-C9E93_RS07400;anticodon=(pos:37..39);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS07400;product=tRNA-Arg NZ_PYJV01000049.1 tRNAscan-SE exon 3 79 . + . ID=exon-C9E93_RS07400-1;Parent=rna-C9E93_RS07400;anticodon=(pos:37..39);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS07400;product=tRNA-Arg NZ_PYJV01000049.1 RefSeq gene 450 1016 . + . ID=gene-C9E93_RS07405;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9E93_RS07405;old_locus_tag=C9E93_07640 NZ_PYJV01000049.1 Protein Homology CDS 450 1016 . + 0 ID=cds-WP_000271296.1;Parent=gene-C9E93_RS07405;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9E93_RS07405;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 1013 1438 . + . ID=gene-C9E93_RS07410;Name=C9E93_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07410;old_locus_tag=C9E93_07645 NZ_PYJV01000049.1 Protein Homology CDS 1013 1438 . + 0 ID=cds-WP_001279499.1;Parent=gene-C9E93_RS07410;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9E93_RS07410;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 1515 3071 . + . ID=gene-C9E93_RS07415;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9E93_RS07415;old_locus_tag=C9E93_07650 NZ_PYJV01000049.1 Protein Homology CDS 1515 3071 . + 0 ID=cds-WP_000611821.1;Parent=gene-C9E93_RS07415;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9E93_RS07415;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 3221 3736 . + . ID=gene-C9E93_RS07420;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9E93_RS07420;old_locus_tag=C9E93_07655 NZ_PYJV01000049.1 Protein Homology CDS 3221 3736 . + 0 ID=cds-WP_135370437.1;Parent=gene-C9E93_RS07420;Dbxref=GenBank:WP_135370437.1;Name=WP_135370437.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9E93_RS07420;product=S-ribosylhomocysteine lyase;protein_id=WP_135370437.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 4082 5452 . + . ID=gene-C9E93_RS07425;Name=C9E93_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07425;old_locus_tag=C9E93_07660 NZ_PYJV01000049.1 Protein Homology CDS 4082 5452 . + 0 ID=cds-WP_000645137.1;Parent=gene-C9E93_RS07425;Dbxref=GenBank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9E93_RS07425;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 5501 7039 . - . ID=gene-C9E93_RS07430;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9E93_RS07430;old_locus_tag=C9E93_07665 NZ_PYJV01000049.1 Protein Homology CDS 5501 7039 . - 0 ID=cds-WP_001187298.1;Parent=gene-C9E93_RS07430;Dbxref=GenBank:WP_001187298.1;Name=WP_001187298.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9E93_RS07430;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187298.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 7056 8228 . - . ID=gene-C9E93_RS07435;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9E93_RS07435;old_locus_tag=C9E93_07670 NZ_PYJV01000049.1 Protein Homology CDS 7056 8228 . - 0 ID=cds-WP_001275603.1;Parent=gene-C9E93_RS07435;Dbxref=GenBank:WP_001275603.1;Name=WP_001275603.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9E93_RS07435;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275603.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 8355 8885 . - . ID=gene-C9E93_RS07440;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9E93_RS07440;old_locus_tag=C9E93_07675 NZ_PYJV01000049.1 Protein Homology CDS 8355 8885 . - 0 ID=cds-WP_000378431.1;Parent=gene-C9E93_RS07440;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9E93_RS07440;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 9382 10566 . - . ID=gene-C9E93_RS07445;Name=C9E93_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07445;old_locus_tag=C9E93_07680 NZ_PYJV01000049.1 Protein Homology CDS 9382 10566 . - 0 ID=cds-WP_000165758.1;Parent=gene-C9E93_RS07445;Dbxref=GenBank:WP_000165758.1;Name=WP_000165758.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9E93_RS07445;product=MFS transporter;protein_id=WP_000165758.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 10731 11726 . - . ID=gene-C9E93_RS07450;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9E93_RS07450;old_locus_tag=C9E93_07685 NZ_PYJV01000049.1 Protein Homology CDS 10731 11726 . - 0 ID=cds-WP_135370533.1;Parent=gene-C9E93_RS07450;Dbxref=GenBank:WP_135370533.1;Name=WP_135370533.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9E93_RS07450;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_135370533.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 11796 12860 . - . ID=gene-C9E93_RS07455;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9E93_RS07455;old_locus_tag=C9E93_07690 NZ_PYJV01000049.1 Protein Homology CDS 11796 12860 . - 0 ID=cds-WP_000775015.1;Parent=gene-C9E93_RS07455;Dbxref=GenBank:WP_000775015.1;Name=WP_000775015.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9E93_RS07455;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775015.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 12853 14055 . - . ID=gene-C9E93_RS07460;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9E93_RS07460;old_locus_tag=C9E93_07695 NZ_PYJV01000049.1 Protein Homology CDS 12853 14055 . - 0 ID=cds-WP_000985529.1;Parent=gene-C9E93_RS07460;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9E93_RS07460;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 14410 15369 . - . ID=gene-C9E93_RS07470;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9E93_RS07470;old_locus_tag=C9E93_07705 NZ_PYJV01000049.1 Protein Homology CDS 14410 15369 . - 0 ID=cds-WP_000777903.1;Parent=gene-C9E93_RS07470;Dbxref=GenBank:WP_000777903.1;Name=WP_000777903.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9E93_RS07470;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777903.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 15380 17497 . - . ID=gene-C9E93_RS07475;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9E93_RS07475;old_locus_tag=C9E93_07710 NZ_PYJV01000049.1 Protein Homology CDS 15380 17497 . - 0 ID=cds-WP_440591218.1;Parent=gene-C9E93_RS07475;Dbxref=GenBank:WP_440591218.1;Name=WP_440591218.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=C9E93_RS07475;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_440591218.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 17497 17907 . - . ID=gene-C9E93_RS07480;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9E93_RS07480;old_locus_tag=C9E93_07715 NZ_PYJV01000049.1 Protein Homology CDS 17497 17907 . - 0 ID=cds-WP_135370535.1;Parent=gene-C9E93_RS07480;Dbxref=GenBank:WP_135370535.1;Name=WP_135370535.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9E93_RS07480;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_135370535.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 17904 18149 . - . ID=gene-C9E93_RS07485;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9E93_RS07485;old_locus_tag=C9E93_07720 NZ_PYJV01000049.1 Protein Homology CDS 17904 18149 . - 0 ID=cds-WP_000028870.1;Parent=gene-C9E93_RS07485;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9E93_RS07485;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 18421 18852 . - . ID=gene-C9E93_RS07495;Name=C9E93_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07495;old_locus_tag=C9E93_07730 NZ_PYJV01000049.1 Protein Homology CDS 18421 18852 . - 0 ID=cds-WP_000209816.1;Parent=gene-C9E93_RS07495;Dbxref=GenBank:WP_000209816.1;Name=WP_000209816.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9E93_RS07495;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209816.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 18941 20275 . + . ID=gene-C9E93_RS07500;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=C9E93_RS07500;old_locus_tag=C9E93_07735 NZ_PYJV01000049.1 Protein Homology CDS 18941 20275 . + 0 ID=cds-WP_135400603.1;Parent=gene-C9E93_RS07500;Dbxref=GenBank:WP_135400603.1;Name=WP_135400603.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9E93_RS07500;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_135400603.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 20359 20685 . - . ID=gene-C9E93_RS07505;Name=C9E93_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07505;old_locus_tag=C9E93_07740 NZ_PYJV01000049.1 Protein Homology CDS 20359 20685 . - 0 ID=cds-WP_001650455.1;Parent=gene-C9E93_RS07505;Dbxref=GenBank:WP_001650455.1;Name=WP_001650455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9E93_RS07505;product=DUF883 domain-containing protein;protein_id=WP_001650455.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 20847 21197 . + . ID=gene-C9E93_RS07510;Name=C9E93_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07510;old_locus_tag=C9E93_07745 NZ_PYJV01000049.1 Protein Homology CDS 20847 21197 . + 0 ID=cds-WP_000281304.1;Parent=gene-C9E93_RS07510;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9E93_RS07510;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 21232 21681 . - . ID=gene-C9E93_RS07515;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9E93_RS07515;old_locus_tag=C9E93_07750 NZ_PYJV01000049.1 Protein Homology CDS 21232 21681 . - 0 ID=cds-WP_000492669.1;Parent=gene-C9E93_RS07515;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9E93_RS07515;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 22380 22781 . + . ID=gene-C9E93_RS07525;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9E93_RS07525;old_locus_tag=C9E93_07760 NZ_PYJV01000049.1 Protein Homology CDS 22380 22781 . + 0 ID=cds-WP_001051100.1;Parent=gene-C9E93_RS07525;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9E93_RS07525;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 22871 23050 . - . ID=gene-C9E93_RS07530;Name=C9E93_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07530;old_locus_tag=C9E93_07765 NZ_PYJV01000049.1 Protein Homology CDS 22871 23050 . - 0 ID=cds-WP_000494942.1;Parent=gene-C9E93_RS07530;Dbxref=GenBank:WP_000494942.1;Name=WP_000494942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9E93_RS07530;product=hypothetical protein;protein_id=WP_000494942.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 23129 23656 . - . ID=gene-C9E93_RS07535;Name=C9E93_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07535;old_locus_tag=C9E93_07770 NZ_PYJV01000049.1 Protein Homology CDS 23129 23656 . - 0 ID=cds-WP_000022011.1;Parent=gene-C9E93_RS07535;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9E93_RS07535;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 23666 23965 . - . ID=gene-C9E93_RS07540;Name=C9E93_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07540;old_locus_tag=C9E93_07775 NZ_PYJV01000049.1 Protein Homology CDS 23666 23965 . - 0 ID=cds-WP_000137432.1;Parent=gene-C9E93_RS07540;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9E93_RS07540;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 24148 24306 . + . ID=gene-C9E93_RS07545;Name=C9E93_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07545;old_locus_tag=C9E93_07780 NZ_PYJV01000049.1 Protein Homology CDS 24148 24306 . + 0 ID=cds-WP_000508175.1;Parent=gene-C9E93_RS07545;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9E93_RS07545;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 24406 24855 . + . ID=gene-C9E93_RS07555;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9E93_RS07555;old_locus_tag=C9E93_07790 NZ_PYJV01000049.1 Protein Homology CDS 24406 24855 . + 0 ID=cds-WP_000522406.1;Parent=gene-C9E93_RS07555;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9E93_RS07555;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 24877 25554 . - . ID=gene-C9E93_RS07560;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9E93_RS07560;old_locus_tag=C9E93_07795 NZ_PYJV01000049.1 Protein Homology CDS 24877 25554 . - 0 ID=cds-WP_000126152.1;Parent=gene-C9E93_RS07560;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9E93_RS07560;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 25596 26996 . - . ID=gene-C9E93_RS07565;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9E93_RS07565;old_locus_tag=C9E93_07800 NZ_PYJV01000049.1 Protein Homology CDS 25596 26996 . - 0 ID=cds-WP_000531282.1;Parent=gene-C9E93_RS07565;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9E93_RS07565;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 27126 28409 . - . ID=gene-C9E93_RS07570;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9E93_RS07570;old_locus_tag=C9E93_07805 NZ_PYJV01000049.1 Protein Homology CDS 27126 28409 . - 0 ID=cds-WP_135370200.1;Parent=gene-C9E93_RS07570;Dbxref=GenBank:WP_135370200.1;Name=WP_135370200.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9E93_RS07570;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_135370200.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 28424 29872 . - . ID=gene-C9E93_RS07575;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9E93_RS07575;old_locus_tag=C9E93_07810 NZ_PYJV01000049.1 Protein Homology CDS 28424 29872 . - 0 ID=cds-WP_080204039.1;Parent=gene-C9E93_RS07575;Dbxref=GenBank:WP_080204039.1;Name=WP_080204039.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9E93_RS07575;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_080204039.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 29894 31162 . - . ID=gene-C9E93_RS07580;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9E93_RS07580;old_locus_tag=C9E93_07815 NZ_PYJV01000049.1 Protein Homology CDS 29894 31162 . - 0 ID=cds-WP_135370201.1;Parent=gene-C9E93_RS07580;Dbxref=GenBank:WP_135370201.1;Name=WP_135370201.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9E93_RS07580;product=L-2-hydroxyglutarate oxidase;protein_id=WP_135370201.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 31188 32165 . - . ID=gene-C9E93_RS07585;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9E93_RS07585;old_locus_tag=C9E93_07820 NZ_PYJV01000049.1 Protein Homology CDS 31188 32165 . - 0 ID=cds-WP_135370202.1;Parent=gene-C9E93_RS07585;Dbxref=GenBank:WP_135370202.1;Name=WP_135370202.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9E93_RS07585;product=glutarate dioxygenase GlaH;protein_id=WP_135370202.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 32468 33982 . - . ID=gene-C9E93_RS07590;Name=C9E93_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07590;old_locus_tag=C9E93_07825 NZ_PYJV01000049.1 Protein Homology CDS 32468 33982 . - 0 ID=cds-WP_000382035.1;Parent=gene-C9E93_RS07590;Dbxref=GenBank:WP_000382035.1;Name=WP_000382035.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9E93_RS07590;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 33993 34427 . - . ID=gene-C9E93_RS07595;Name=C9E93_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07595;old_locus_tag=C9E93_07830 NZ_PYJV01000049.1 Protein Homology CDS 33993 34427 . - 0 ID=cds-WP_001574835.1;Parent=gene-C9E93_RS07595;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9E93_RS07595;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 34439 35416 . - . ID=gene-C9E93_RS07600;Name=C9E93_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07600;old_locus_tag=C9E93_07835 NZ_PYJV01000049.1 Protein Homology CDS 34439 35416 . - 0 ID=cds-WP_000744416.1;Parent=gene-C9E93_RS07600;Dbxref=GenBank:WP_000744416.1;Name=WP_000744416.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9E93_RS07600;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744416.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 35571 36245 . + . ID=gene-C9E93_RS07605;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9E93_RS07605;old_locus_tag=C9E93_07840 NZ_PYJV01000049.1 Protein Homology CDS 35571 36245 . + 0 ID=cds-WP_001237934.1;Parent=gene-C9E93_RS07605;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9E93_RS07605;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 36232 37647 . + . ID=gene-C9E93_RS07610;Name=C9E93_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07610;old_locus_tag=C9E93_07845 NZ_PYJV01000049.1 Protein Homology CDS 36232 37647 . + 0 ID=cds-WP_000872338.1;Parent=gene-C9E93_RS07610;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9E93_RS07610;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 37780 38793 . + . ID=gene-C9E93_RS07615;Name=C9E93_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07615;old_locus_tag=C9E93_07850 NZ_PYJV01000049.1 Protein Homology CDS 37780 38793 . + 0 ID=cds-WP_135370203.1;Parent=gene-C9E93_RS07615;Dbxref=GenBank:WP_135370203.1;Name=WP_135370203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9E93_RS07615;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_135370203.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 39515 40411 . - . ID=gene-C9E93_RS07620;Name=C9E93_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07620;old_locus_tag=C9E93_07855 NZ_PYJV01000049.1 Protein Homology CDS 39515 40411 . - 0 ID=cds-WP_135370204.1;Parent=gene-C9E93_RS07620;Dbxref=GenBank:WP_135370204.1;Name=WP_135370204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9E93_RS07620;product=antimicrobial resistance protein Mig-14;protein_id=WP_135370204.1;transl_table=11 NZ_PYJV01000049.1 RefSeq gene 40705 41634 . - . ID=gene-C9E93_RS07630;Name=C9E93_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07630;old_locus_tag=C9E93_07865 NZ_PYJV01000049.1 Protein Homology CDS 40705 41634 . - 0 ID=cds-WP_135370205.1;Parent=gene-C9E93_RS07630;Dbxref=GenBank:WP_135370205.1;Name=WP_135370205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9E93_RS07630;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_135370205.1;transl_table=11 ##sequence-region NZ_PYJV01000004.1 1 40720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000004.1 RefSeq region 1 40720 . + . ID=NZ_PYJV01000004.1:1..40720;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000004.1 RefSeq gene 1 217 . + . ID=gene-C9E93_RS23645;Name=C9E93_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23645;partial=true;start_range=.,1 NZ_PYJV01000004.1 GeneMarkS-2+ CDS 1 217 . + 1 ID=cds-WP_206677757.1;Parent=gene-C9E93_RS23645;Dbxref=GenBank:WP_206677757.1;Name=WP_206677757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23645;partial=true;product=hypothetical protein;protein_id=WP_206677757.1;start_range=.,1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 147 767 . + . ID=gene-C9E93_RS00020;Name=C9E93_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00020;old_locus_tag=C9E93_00020 NZ_PYJV01000004.1 Protein Homology CDS 147 767 . + 0 ID=cds-WP_000877509.1;Parent=gene-C9E93_RS00020;Dbxref=GenBank:WP_000877509.1;Name=WP_000877509.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9E93_RS00020;product=YdcF family protein;protein_id=WP_000877509.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 811 3162 . + . ID=gene-C9E93_RS00025;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9E93_RS00025;old_locus_tag=C9E93_00025 NZ_PYJV01000004.1 Protein Homology CDS 811 3162 . + 0 ID=cds-WP_000035715.1;Parent=gene-C9E93_RS00025;Dbxref=GenBank:WP_000035715.1;Name=WP_000035715.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9E93_RS00025;product=DNA polymerase II;protein_id=WP_000035715.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 3336 6242 . + . ID=gene-C9E93_RS00030;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9E93_RS00030;old_locus_tag=C9E93_00030 NZ_PYJV01000004.1 Protein Homology CDS 3336 6242 . + 0 ID=cds-WP_001116966.1;Parent=gene-C9E93_RS00030;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9E93_RS00030;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 6254 6913 . + . ID=gene-C9E93_RS00035;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9E93_RS00035;old_locus_tag=C9E93_00035 NZ_PYJV01000004.1 Protein Homology CDS 6254 6913 . + 0 ID=cds-WP_000525198.1;Parent=gene-C9E93_RS00035;Dbxref=GenBank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9E93_RS00035;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 7008 7820 . - . ID=gene-C9E93_RS00040;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9E93_RS00040;old_locus_tag=C9E93_00040 NZ_PYJV01000004.1 Protein Homology CDS 7008 7820 . - 0 ID=cds-WP_001200595.1;Parent=gene-C9E93_RS00040;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9E93_RS00040;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 8074 10434 . + . ID=gene-C9E93_RS00045;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9E93_RS00045;old_locus_tag=C9E93_00045 NZ_PYJV01000004.1 Protein Homology CDS 8074 10434 . + 0 ID=cds-WP_135369916.1;Parent=gene-C9E93_RS00045;Dbxref=GenBank:WP_135369916.1;Name=WP_135369916.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9E93_RS00045;product=LPS assembly protein LptD;protein_id=WP_135369916.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 10488 11774 . + . ID=gene-C9E93_RS00050;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9E93_RS00050;old_locus_tag=C9E93_00050 NZ_PYJV01000004.1 Protein Homology CDS 10488 11774 . + 0 ID=cds-WP_000800482.1;Parent=gene-C9E93_RS00050;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9E93_RS00050;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 11774 12763 . + . ID=gene-C9E93_RS00055;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9E93_RS00055;old_locus_tag=C9E93_00055 NZ_PYJV01000004.1 Protein Homology CDS 11774 12763 . + 0 ID=cds-WP_000093001.1;Parent=gene-C9E93_RS00055;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9E93_RS00055;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 12760 13581 . + . ID=gene-C9E93_RS00060;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9E93_RS00060;old_locus_tag=C9E93_00060 NZ_PYJV01000004.1 Protein Homology CDS 12760 13581 . + 0 ID=cds-WP_001065397.1;Parent=gene-C9E93_RS00060;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9E93_RS00060;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 13584 13961 . + . ID=gene-C9E93_RS00065;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9E93_RS00065;old_locus_tag=C9E93_00065 NZ_PYJV01000004.1 Protein Homology CDS 13584 13961 . + 0 ID=cds-WP_000610894.1;Parent=gene-C9E93_RS00065;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9E93_RS00065;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 13972 14820 . + . ID=gene-C9E93_RS00070;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9E93_RS00070;old_locus_tag=C9E93_00070 NZ_PYJV01000004.1 Protein Homology CDS 13972 14820 . + 0 ID=cds-WP_000257211.1;Parent=gene-C9E93_RS00070;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9E93_RS00070;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 14926 15405 . - . ID=gene-C9E93_RS00075;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9E93_RS00075;old_locus_tag=C9E93_00075 NZ_PYJV01000004.1 Protein Homology CDS 14926 15405 . - 0 ID=cds-WP_000624379.1;Parent=gene-C9E93_RS00075;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9E93_RS00075;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 15604 17466 . - . ID=gene-C9E93_RS00080;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=C9E93_RS00080;old_locus_tag=C9E93_00085 NZ_PYJV01000004.1 Protein Homology CDS 15604 17466 . - 0 ID=cds-WP_135400574.1;Parent=gene-C9E93_RS00080;Dbxref=GenBank:WP_135400574.1;Name=WP_135400574.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9E93_RS00080;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_135400574.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 17459 17989 . - . ID=gene-C9E93_RS00085;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9E93_RS00085;old_locus_tag=C9E93_00090 NZ_PYJV01000004.1 Protein Homology CDS 17459 17989 . - 0 ID=cds-WP_000600706.1;Parent=gene-C9E93_RS00085;Dbxref=GenBank:WP_000600706.1;Name=WP_000600706.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9E93_RS00085;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600706.1;transl_table=11 NZ_PYJV01000004.1 RefSeq pseudogene 18111 18191 . + . ID=gene-C9E93_RS24120;Name=C9E93_RS24120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24120;old_locus_tag=C9E93_00095;partial=true;pseudo=true;start_range=.,18111 NZ_PYJV01000004.1 Protein Homology CDS 18111 18191 . + 0 ID=cds-C9E93_RS24120;Parent=gene-C9E93_RS24120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E93_RS24120;partial=true;product=hypothetical protein;pseudo=true;start_range=.,18111;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 18396 20285 . - . ID=gene-C9E93_RS00090;Name=C9E93_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00090;old_locus_tag=C9E93_00100 NZ_PYJV01000004.1 Protein Homology CDS 18396 20285 . - 0 ID=cds-WP_135369918.1;Parent=gene-C9E93_RS00090;Dbxref=GenBank:WP_135369918.1;Name=WP_135369918.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9E93_RS00090;product=sulfatase-like hydrolase/transferase;protein_id=WP_135369918.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 21183 21473 . + . ID=gene-C9E93_RS00095;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9E93_RS00095;old_locus_tag=C9E93_00110 NZ_PYJV01000004.1 Protein Homology CDS 21183 21473 . + 0 ID=cds-WP_135370102.1;Parent=gene-C9E93_RS00095;Dbxref=GenBank:WP_135370102.1;Name=WP_135370102.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9E93_RS00095;product=DUF1471 family virulence protein SrfN;protein_id=WP_135370102.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 21697 22113 . - . ID=gene-C9E93_RS00100;Name=C9E93_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00100;old_locus_tag=C9E93_00115 NZ_PYJV01000004.1 Protein Homology CDS 21697 22113 . - 0 ID=cds-WP_135370099.1;Parent=gene-C9E93_RS00100;Dbxref=GenBank:WP_135370099.1;Name=WP_135370099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9E93_RS00100;product=hypothetical protein;protein_id=WP_135370099.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 22393 22623 . - . ID=gene-C9E93_RS00105;Name=C9E93_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00105;old_locus_tag=C9E93_00120 NZ_PYJV01000004.1 Protein Homology CDS 22393 22623 . - 0 ID=cds-WP_001172089.1;Parent=gene-C9E93_RS00105;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9E93_RS00105;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 22712 24052 . - . ID=gene-C9E93_RS00110;Name=C9E93_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00110;old_locus_tag=C9E93_00125 NZ_PYJV01000004.1 Protein Homology CDS 22712 24052 . - 0 ID=cds-WP_001187057.1;Parent=gene-C9E93_RS00110;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9E93_RS00110;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 24199 24486 . - . ID=gene-C9E93_RS00115;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9E93_RS00115;old_locus_tag=C9E93_00130 NZ_PYJV01000004.1 Protein Homology CDS 24199 24486 . - 0 ID=cds-WP_000203736.1;Parent=gene-C9E93_RS00115;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9E93_RS00115;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 24483 25769 . - . ID=gene-C9E93_RS00120;Name=C9E93_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00120;old_locus_tag=C9E93_00135 NZ_PYJV01000004.1 Protein Homology CDS 24483 25769 . - 0 ID=cds-WP_023213706.1;Parent=gene-C9E93_RS00120;Dbxref=GenBank:WP_023213706.1;Name=WP_023213706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9E93_RS00120;product=FAD-dependent oxidoreductase;protein_id=WP_023213706.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 25819 26760 . - . ID=gene-C9E93_RS00125;Name=C9E93_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00125;old_locus_tag=C9E93_00140 NZ_PYJV01000004.1 Protein Homology CDS 25819 26760 . - 0 ID=cds-WP_001032189.1;Parent=gene-C9E93_RS00125;Dbxref=GenBank:WP_001032189.1;Name=WP_001032189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9E93_RS00125;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032189.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 26776 27546 . - . ID=gene-C9E93_RS00130;Name=C9E93_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00130;old_locus_tag=C9E93_00145 NZ_PYJV01000004.1 Protein Homology CDS 26776 27546 . - 0 ID=cds-WP_000692190.1;Parent=gene-C9E93_RS00130;Dbxref=GenBank:WP_000692190.1;Name=WP_000692190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9E93_RS00130;product=electron transfer flavoprotein FixA;protein_id=WP_000692190.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 28027 29544 . + . ID=gene-C9E93_RS00135;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9E93_RS00135;old_locus_tag=C9E93_00155 NZ_PYJV01000004.1 Protein Homology CDS 28027 29544 . + 0 ID=cds-WP_000787073.1;Parent=gene-C9E93_RS00135;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9E93_RS00135;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 29579 30721 . + . ID=gene-C9E93_RS00140;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9E93_RS00140;old_locus_tag=C9E93_00160 NZ_PYJV01000004.1 Protein Homology CDS 29579 30721 . + 0 ID=cds-WP_000347134.1;Parent=gene-C9E93_RS00140;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9E93_RS00140;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 30833 32050 . + . ID=gene-C9E93_RS00145;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9E93_RS00145;old_locus_tag=C9E93_00165 NZ_PYJV01000004.1 Protein Homology CDS 30833 32050 . + 0 ID=cds-WP_001016212.1;Parent=gene-C9E93_RS00145;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9E93_RS00145;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 32113 33666 . + . ID=gene-C9E93_RS00150;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9E93_RS00150;old_locus_tag=C9E93_00170 NZ_PYJV01000004.1 Protein Homology CDS 32113 33666 . + 0 ID=cds-WP_135370100.1;Parent=gene-C9E93_RS00150;Dbxref=GenBank:WP_135370100.1;Name=WP_135370100.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9E93_RS00150;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_135370100.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 33720 34505 . + . ID=gene-C9E93_RS00155;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9E93_RS00155;old_locus_tag=C9E93_00175 NZ_PYJV01000004.1 Protein Homology CDS 33720 34505 . + 0 ID=cds-WP_000004383.1;Parent=gene-C9E93_RS00155;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E93_RS00155;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 34615 35211 . + . ID=gene-C9E93_RS00160;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9E93_RS00160;old_locus_tag=C9E93_00180 NZ_PYJV01000004.1 Protein Homology CDS 34615 35211 . + 0 ID=cds-WP_000122864.1;Parent=gene-C9E93_RS00160;Dbxref=GenBank:WP_000122864.1;Name=WP_000122864.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9E93_RS00160;product=carnitine operon protein CaiE;protein_id=WP_000122864.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 35289 35684 . - . ID=gene-C9E93_RS00165;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9E93_RS00165;old_locus_tag=C9E93_00185 NZ_PYJV01000004.1 Protein Homology CDS 35289 35684 . - 0 ID=cds-WP_000333324.1;Parent=gene-C9E93_RS00165;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9E93_RS00165;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 35958 39185 . - . ID=gene-C9E93_RS00170;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9E93_RS00170;old_locus_tag=C9E93_00190 NZ_PYJV01000004.1 Protein Homology CDS 35958 39185 . - 0 ID=cds-WP_135370101.1;Parent=gene-C9E93_RS00170;Dbxref=GenBank:WP_135370101.1;Name=WP_135370101.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9E93_RS00170;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_135370101.1;transl_table=11 NZ_PYJV01000004.1 RefSeq gene 39204 40352 . - . ID=gene-C9E93_RS00175;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9E93_RS00175;old_locus_tag=C9E93_00195 NZ_PYJV01000004.1 Protein Homology CDS 39204 40352 . - 0 ID=cds-WP_020839606.1;Parent=gene-C9E93_RS00175;Dbxref=GenBank:WP_020839606.1;Name=WP_020839606.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9E93_RS00175;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_020839606.1;transl_table=11 ##sequence-region NZ_PYJV01000123.1 1 40252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000123.1 RefSeq region 1 40252 . + . ID=NZ_PYJV01000123.1:1..40252;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000123.1 RefSeq gene 109 786 . - . ID=gene-C9E93_RS22135;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=C9E93_RS22135;old_locus_tag=C9E93_22715 NZ_PYJV01000123.1 Protein Homology CDS 109 786 . - 0 ID=cds-WP_000186054.1;Parent=gene-C9E93_RS22135;Dbxref=GenBank:WP_000186054.1;Name=WP_000186054.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9E93_RS22135;product=two-component system response regulator KdpE;protein_id=WP_000186054.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 783 3467 . - . ID=gene-C9E93_RS22140;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9E93_RS22140;old_locus_tag=C9E93_22720 NZ_PYJV01000123.1 Protein Homology CDS 783 3467 . - 0 ID=cds-WP_135370448.1;Parent=gene-C9E93_RS22140;Dbxref=GenBank:WP_135370448.1;Name=WP_135370448.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9E93_RS22140;product=two-component system sensor histidine kinase KdpD;protein_id=WP_135370448.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 3464 4048 . - . ID=gene-C9E93_RS22145;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9E93_RS22145;old_locus_tag=C9E93_22725 NZ_PYJV01000123.1 Protein Homology CDS 3464 4048 . - 0 ID=cds-WP_080167250.1;Parent=gene-C9E93_RS22145;Dbxref=GenBank:WP_080167250.1;Name=WP_080167250.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9E93_RS22145;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_080167250.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 4057 6105 . - . ID=gene-C9E93_RS22150;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9E93_RS22150;old_locus_tag=C9E93_22730 NZ_PYJV01000123.1 Protein Homology CDS 4057 6105 . - 0 ID=cds-WP_000088033.1;Parent=gene-C9E93_RS22150;Dbxref=GenBank:WP_000088033.1;Name=WP_000088033.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9E93_RS22150;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088033.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 6126 7805 . - . ID=gene-C9E93_RS22155;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9E93_RS22155;old_locus_tag=C9E93_22735 NZ_PYJV01000123.1 Protein Homology CDS 6126 7805 . - 0 ID=cds-WP_000730078.1;Parent=gene-C9E93_RS22155;Dbxref=GenBank:WP_000730078.1;Name=WP_000730078.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9E93_RS22155;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730078.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 7805 7894 . - . ID=gene-C9E93_RS22160;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9E93_RS22160;old_locus_tag=C9E93_22740 NZ_PYJV01000123.1 Protein Homology CDS 7805 7894 . - 0 ID=cds-WP_001670793.1;Parent=gene-C9E93_RS22160;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9E93_RS22160;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 8231 8437 . + . ID=gene-C9E93_RS22165;Name=C9E93_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22165;old_locus_tag=C9E93_22745 NZ_PYJV01000123.1 Protein Homology CDS 8231 8437 . + 0 ID=cds-WP_000401437.1;Parent=gene-C9E93_RS22165;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9E93_RS22165;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 8549 9970 . + . ID=gene-C9E93_RS22170;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9E93_RS22170;old_locus_tag=C9E93_22750 NZ_PYJV01000123.1 Protein Homology CDS 8549 9970 . + 0 ID=cds-WP_001142022.1;Parent=gene-C9E93_RS22170;Dbxref=GenBank:WP_001142022.1;Name=WP_001142022.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9E93_RS22170;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142022.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 10009 11490 . - . ID=gene-C9E93_RS22175;Name=C9E93_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22175;old_locus_tag=C9E93_22755 NZ_PYJV01000123.1 Protein Homology CDS 10009 11490 . - 0 ID=cds-WP_001041123.1;Parent=gene-C9E93_RS22175;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9E93_RS22175;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 11819 12562 . + . ID=gene-C9E93_RS22180;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9E93_RS22180;old_locus_tag=C9E93_22765 NZ_PYJV01000123.1 Protein Homology CDS 11819 12562 . + 0 ID=cds-WP_135370182.1;Parent=gene-C9E93_RS22180;Dbxref=GenBank:WP_135370182.1;Name=WP_135370182.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9E93_RS22180;product=radiation resistance protein YbgI;protein_id=WP_135370182.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 12578 13234 . + . ID=gene-C9E93_RS22185;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9E93_RS22185;old_locus_tag=C9E93_22770 NZ_PYJV01000123.1 Protein Homology CDS 12578 13234 . + 0 ID=cds-WP_064012878.1;Parent=gene-C9E93_RS22185;Dbxref=GenBank:WP_064012878.1;Name=WP_064012878.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9E93_RS22185;product=5-oxoprolinase subunit PxpB;protein_id=WP_064012878.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 13228 14160 . + . ID=gene-C9E93_RS22190;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=C9E93_RS22190;old_locus_tag=C9E93_22775 NZ_PYJV01000123.1 Protein Homology CDS 13228 14160 . + 0 ID=cds-WP_000932043.1;Parent=gene-C9E93_RS22190;Dbxref=GenBank:WP_000932043.1;Name=WP_000932043.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9E93_RS22190;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932043.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 14150 14884 . + . ID=gene-C9E93_RS22195;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9E93_RS22195;old_locus_tag=C9E93_22780 NZ_PYJV01000123.1 Protein Homology CDS 14150 14884 . + 0 ID=cds-WP_001017922.1;Parent=gene-C9E93_RS22195;Dbxref=GenBank:WP_001017922.1;Name=WP_001017922.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9E93_RS22195;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017922.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 15006 15797 . + . ID=gene-C9E93_RS22200;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9E93_RS22200;old_locus_tag=C9E93_22785 NZ_PYJV01000123.1 Protein Homology CDS 15006 15797 . + 0 ID=cds-WP_001113967.1;Parent=gene-C9E93_RS22200;Dbxref=GenBank:WP_001113967.1;Name=WP_001113967.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9E93_RS22200;product=endonuclease VIII;protein_id=WP_001113967.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 15852 16898 . - . ID=gene-C9E93_RS22205;Name=C9E93_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22205;old_locus_tag=C9E93_22790 NZ_PYJV01000123.1 Protein Homology CDS 15852 16898 . - 0 ID=cds-WP_023218323.1;Parent=gene-C9E93_RS22205;Dbxref=GenBank:WP_023218323.1;Name=WP_023218323.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9E93_RS22205;product=AbrB family transcriptional regulator;protein_id=WP_023218323.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 17034 18317 . - . ID=gene-C9E93_RS22210;Name=C9E93_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS22210;old_locus_tag=C9E93_22795 NZ_PYJV01000123.1 Protein Homology CDS 17034 18317 . - 0 ID=cds-WP_000785811.1;Parent=gene-C9E93_RS22210;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9E93_RS22210;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 18543 18674 . - . ID=gene-C9E93_RS24235;Name=C9E93_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24235 NZ_PYJV01000123.1 Protein Homology CDS 18543 18674 . - 0 ID=cds-WP_418142699.1;Parent=gene-C9E93_RS24235;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=C9E93_RS24235;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 19057 19461 . + . ID=gene-C9E93_RS22215;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9E93_RS22215;old_locus_tag=C9E93_22810 NZ_PYJV01000123.1 Protein Homology CDS 19057 19461 . + 0 ID=cds-WP_000263340.1;Parent=gene-C9E93_RS22215;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9E93_RS22215;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 19455 19802 . + . ID=gene-C9E93_RS22220;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9E93_RS22220;old_locus_tag=C9E93_22815 NZ_PYJV01000123.1 Protein Homology CDS 19455 19802 . + 0 ID=cds-WP_000254356.1;Parent=gene-C9E93_RS22220;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9E93_RS22220;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 19802 21568 . + . ID=gene-C9E93_RS22225;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9E93_RS22225;old_locus_tag=C9E93_22820 NZ_PYJV01000123.1 Protein Homology CDS 19802 21568 . + 0 ID=cds-WP_000775561.1;Parent=gene-C9E93_RS22225;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9E93_RS22225;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 21585 22301 . + . ID=gene-C9E93_RS22230;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9E93_RS22230;old_locus_tag=C9E93_22825 NZ_PYJV01000123.1 Protein Homology CDS 21585 22301 . + 0 ID=cds-WP_001537859.1;Parent=gene-C9E93_RS22230;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9E93_RS22230;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 22827 25628 . + . ID=gene-C9E93_RS22235;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9E93_RS22235;old_locus_tag=C9E93_22830 NZ_PYJV01000123.1 Protein Homology CDS 22827 25628 . + 0 ID=cds-WP_001181500.1;Parent=gene-C9E93_RS22235;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9E93_RS22235;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 25643 26851 . + . ID=gene-C9E93_RS22240;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=C9E93_RS22240;old_locus_tag=C9E93_22835 NZ_PYJV01000123.1 Protein Homology CDS 25643 26851 . + 0 ID=cds-WP_000099858.1;Parent=gene-C9E93_RS22240;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9E93_RS22240;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 26993 28159 . + . ID=gene-C9E93_RS22245;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9E93_RS22245;old_locus_tag=C9E93_22840 NZ_PYJV01000123.1 Protein Homology CDS 26993 28159 . + 0 ID=cds-WP_001048590.1;Parent=gene-C9E93_RS22245;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9E93_RS22245;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 28159 29028 . + . ID=gene-C9E93_RS22250;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9E93_RS22250;old_locus_tag=C9E93_22845 NZ_PYJV01000123.1 Protein Homology CDS 28159 29028 . + 0 ID=cds-WP_000114631.1;Parent=gene-C9E93_RS22250;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9E93_RS22250;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 30611 32179 . + . ID=gene-C9E93_RS22255;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9E93_RS22255;old_locus_tag=C9E93_22855 NZ_PYJV01000123.1 Protein Homology CDS 30611 32179 . + 0 ID=cds-WP_000884369.1;Parent=gene-C9E93_RS22255;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9E93_RS22255;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 32195 33334 . + . ID=gene-C9E93_RS22260;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E93_RS22260;old_locus_tag=C9E93_22860 NZ_PYJV01000123.1 Protein Homology CDS 32195 33334 . + 0 ID=cds-WP_000568258.1;Parent=gene-C9E93_RS22260;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9E93_RS22260;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 33349 33462 . + . ID=gene-C9E93_RS22265;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=C9E93_RS22265;old_locus_tag=C9E93_22865 NZ_PYJV01000123.1 Protein Homology CDS 33349 33462 . + 0 ID=cds-WP_000270278.1;Parent=gene-C9E93_RS22265;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9E93_RS22265;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 33462 33755 . + . ID=gene-C9E93_RS22270;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9E93_RS22270;old_locus_tag=C9E93_22870 NZ_PYJV01000123.1 Protein Homology CDS 33462 33755 . + 0 ID=cds-WP_000148790.1;Parent=gene-C9E93_RS22270;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9E93_RS22270;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 33984 34388 . + . ID=gene-C9E93_RS22275;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9E93_RS22275;old_locus_tag=C9E93_22875 NZ_PYJV01000123.1 Protein Homology CDS 33984 34388 . + 0 ID=cds-WP_001046240.1;Parent=gene-C9E93_RS22275;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9E93_RS22275;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 34385 35077 . + . ID=gene-C9E93_RS22280;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9E93_RS22280;old_locus_tag=C9E93_22880 NZ_PYJV01000123.1 Protein Homology CDS 34385 35077 . + 0 ID=cds-WP_000131318.1;Parent=gene-C9E93_RS22280;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9E93_RS22280;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 35081 35509 . + . ID=gene-C9E93_RS22285;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9E93_RS22285;old_locus_tag=C9E93_22885 NZ_PYJV01000123.1 Protein Homology CDS 35081 35509 . + 0 ID=cds-WP_000124676.1;Parent=gene-C9E93_RS22285;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9E93_RS22285;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 35574 36752 . + . ID=gene-C9E93_RS22290;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9E93_RS22290;old_locus_tag=C9E93_22890 NZ_PYJV01000123.1 Protein Homology CDS 35574 36752 . + 0 ID=cds-WP_023136707.1;Parent=gene-C9E93_RS22290;Dbxref=GenBank:WP_023136707.1;Name=WP_023136707.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9E93_RS22290;product=cell envelope integrity protein TolA;protein_id=WP_023136707.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 36876 38168 . + . ID=gene-C9E93_RS22295;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9E93_RS22295;old_locus_tag=C9E93_22895 NZ_PYJV01000123.1 Protein Homology CDS 36876 38168 . + 0 ID=cds-WP_001562341.1;Parent=gene-C9E93_RS22295;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9E93_RS22295;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 38203 38727 . + . ID=gene-C9E93_RS22300;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9E93_RS22300;old_locus_tag=C9E93_22900 NZ_PYJV01000123.1 Protein Homology CDS 38203 38727 . + 0 ID=cds-WP_001176621.1;Parent=gene-C9E93_RS22300;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9E93_RS22300;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 38737 39525 . + . ID=gene-C9E93_RS22305;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9E93_RS22305;old_locus_tag=C9E93_22905 NZ_PYJV01000123.1 Protein Homology CDS 38737 39525 . + 0 ID=cds-WP_000097552.1;Parent=gene-C9E93_RS22305;Dbxref=GenBank:WP_000097552.1;Name=WP_000097552.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9E93_RS22305;product=cell division protein CpoB;protein_id=WP_000097552.1;transl_table=11 NZ_PYJV01000123.1 RefSeq gene 39690 39765 . + . ID=gene-C9E93_RS22310;Name=C9E93_RS22310;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS22310;old_locus_tag=C9E93_22910 NZ_PYJV01000123.1 tRNAscan-SE tRNA 39690 39765 . + . ID=rna-C9E93_RS22310;Parent=gene-C9E93_RS22310;anticodon=(pos:39723..39725);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22310;product=tRNA-Lys NZ_PYJV01000123.1 tRNAscan-SE exon 39690 39765 . + . ID=exon-C9E93_RS22310-1;Parent=rna-C9E93_RS22310;anticodon=(pos:39723..39725);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22310;product=tRNA-Lys NZ_PYJV01000123.1 RefSeq gene 39902 39977 . + . ID=gene-C9E93_RS22315;Name=C9E93_RS22315;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS22315;old_locus_tag=C9E93_22915 NZ_PYJV01000123.1 tRNAscan-SE tRNA 39902 39977 . + . ID=rna-C9E93_RS22315;Parent=gene-C9E93_RS22315;anticodon=(pos:39935..39937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22315;product=tRNA-Val NZ_PYJV01000123.1 tRNAscan-SE exon 39902 39977 . + . ID=exon-C9E93_RS22315-1;Parent=rna-C9E93_RS22315;anticodon=(pos:39935..39937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22315;product=tRNA-Val NZ_PYJV01000123.1 RefSeq gene 39981 40056 . + . ID=gene-C9E93_RS22320;Name=C9E93_RS22320;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS22320;old_locus_tag=C9E93_22920 NZ_PYJV01000123.1 tRNAscan-SE tRNA 39981 40056 . + . ID=rna-C9E93_RS22320;Parent=gene-C9E93_RS22320;anticodon=(pos:40014..40016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22320;product=tRNA-Lys NZ_PYJV01000123.1 tRNAscan-SE exon 39981 40056 . + . ID=exon-C9E93_RS22320-1;Parent=rna-C9E93_RS22320;anticodon=(pos:40014..40016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS22320;product=tRNA-Lys ##sequence-region NZ_PYJV01000061.1 1 39398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000061.1 RefSeq region 1 39398 . + . ID=NZ_PYJV01000061.1:1..39398;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000061.1 RefSeq gene 80 156 . - . ID=gene-C9E93_RS09785;Name=C9E93_RS09785;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09785;old_locus_tag=C9E93_10035 NZ_PYJV01000061.1 tRNAscan-SE tRNA 80 156 . - . ID=rna-C9E93_RS09785;Parent=gene-C9E93_RS09785;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09785;product=tRNA-Met NZ_PYJV01000061.1 tRNAscan-SE exon 80 156 . - . ID=exon-C9E93_RS09785-1;Parent=rna-C9E93_RS09785;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09785;product=tRNA-Met NZ_PYJV01000061.1 RefSeq gene 364 1461 . + . ID=gene-C9E93_RS09790;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9E93_RS09790;old_locus_tag=C9E93_10040 NZ_PYJV01000061.1 Protein Homology CDS 364 1461 . + 0 ID=cds-WP_000678626.1;Parent=gene-C9E93_RS09790;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9E93_RS09790;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 1570 2376 . + . ID=gene-C9E93_RS09795;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9E93_RS09795;old_locus_tag=C9E93_10045 NZ_PYJV01000061.1 Protein Homology CDS 1570 2376 . + 0 ID=cds-WP_000117742.1;Parent=gene-C9E93_RS09795;Dbxref=GenBank:WP_000117742.1;Name=WP_000117742.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9E93_RS09795;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117742.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 2428 3315 . - . ID=gene-C9E93_RS09800;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E93_RS09800;old_locus_tag=C9E93_10050 NZ_PYJV01000061.1 Protein Homology CDS 2428 3315 . - 0 ID=cds-WP_111742538.1;Parent=gene-C9E93_RS09800;Dbxref=GenBank:WP_111742538.1;Name=WP_111742538.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9E93_RS09800;product=EamA family transporter RarD;protein_id=WP_111742538.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 3615 4058 . - . ID=gene-C9E93_RS09805;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9E93_RS09805;old_locus_tag=C9E93_10055 NZ_PYJV01000061.1 Protein Homology CDS 3615 4058 . - 0 ID=cds-WP_000184195.1;Parent=gene-C9E93_RS09805;Dbxref=GenBank:WP_000184195.1;Name=WP_000184195.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=C9E93_RS09805;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184195.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 4058 5263 . - . ID=gene-C9E93_RS09810;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9E93_RS09810;old_locus_tag=C9E93_10060 NZ_PYJV01000061.1 Protein Homology CDS 4058 5263 . - 0 ID=cds-WP_000991056.1;Parent=gene-C9E93_RS09810;Dbxref=GenBank:WP_000991056.1;Name=WP_000991056.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9E93_RS09810;product=cysteine desulfurase CsdA;protein_id=WP_000991056.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 5456 5683 . + . ID=gene-C9E93_RS09815;Name=C9E93_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09815;old_locus_tag=C9E93_10065 NZ_PYJV01000061.1 Protein Homology CDS 5456 5683 . + 0 ID=cds-WP_000750393.1;Parent=gene-C9E93_RS09815;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9E93_RS09815;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 6030 6947 . + . ID=gene-C9E93_RS09820;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9E93_RS09820;old_locus_tag=C9E93_10070 NZ_PYJV01000061.1 Protein Homology CDS 6030 6947 . + 0 ID=cds-WP_000044409.1;Parent=gene-C9E93_RS09820;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9E93_RS09820;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 6966 7361 . + . ID=gene-C9E93_RS09825;Name=C9E93_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09825;old_locus_tag=C9E93_10075 NZ_PYJV01000061.1 Protein Homology CDS 6966 7361 . + 0 ID=cds-WP_000203913.1;Parent=gene-C9E93_RS09825;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9E93_RS09825;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 7354 8454 . + . ID=gene-C9E93_RS09830;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9E93_RS09830;old_locus_tag=C9E93_10080 NZ_PYJV01000061.1 Protein Homology CDS 7354 8454 . + 0 ID=cds-WP_001045494.1;Parent=gene-C9E93_RS09830;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9E93_RS09830;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 8513 9223 . - . ID=gene-C9E93_RS09835;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9E93_RS09835;old_locus_tag=C9E93_10085 NZ_PYJV01000061.1 Protein Homology CDS 8513 9223 . - 0 ID=cds-WP_000642330.1;Parent=gene-C9E93_RS09835;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9E93_RS09835;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 9281 9703 . - . ID=gene-C9E93_RS09840;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9E93_RS09840;old_locus_tag=C9E93_10090 NZ_PYJV01000061.1 Protein Homology CDS 9281 9703 . - 0 ID=cds-WP_000920848.1;Parent=gene-C9E93_RS09840;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9E93_RS09840;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 9705 11123 . - . ID=gene-C9E93_RS09845;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9E93_RS09845;old_locus_tag=C9E93_10095 NZ_PYJV01000061.1 Protein Homology CDS 9705 11123 . - 0 ID=cds-WP_135370631.1;Parent=gene-C9E93_RS09845;Dbxref=GenBank:WP_135370631.1;Name=WP_135370631.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9E93_RS09845;product=L-fuculokinase;protein_id=WP_135370631.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 11224 12999 . - . ID=gene-C9E93_RS09850;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9E93_RS09850;old_locus_tag=C9E93_10100 NZ_PYJV01000061.1 Protein Homology CDS 11224 12999 . - 0 ID=cds-WP_000724126.1;Parent=gene-C9E93_RS09850;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9E93_RS09850;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 13031 14347 . - . ID=gene-C9E93_RS09855;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E93_RS09855;old_locus_tag=C9E93_10105 NZ_PYJV01000061.1 Protein Homology CDS 13031 14347 . - 0 ID=cds-WP_000528625.1;Parent=gene-C9E93_RS09855;Dbxref=GenBank:WP_000528625.1;Name=WP_000528625.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9E93_RS09855;product=L-fucose:H+ symporter permease;protein_id=WP_000528625.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 14903 15550 . + . ID=gene-C9E93_RS09860;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9E93_RS09860;old_locus_tag=C9E93_10110 NZ_PYJV01000061.1 Protein Homology CDS 14903 15550 . + 0 ID=cds-WP_000440828.1;Parent=gene-C9E93_RS09860;Dbxref=GenBank:WP_000440828.1;Name=WP_000440828.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9E93_RS09860;product=L-fuculose-phosphate aldolase;protein_id=WP_000440828.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 15567 16715 . + . ID=gene-C9E93_RS09865;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E93_RS09865;old_locus_tag=C9E93_10115 NZ_PYJV01000061.1 Protein Homology CDS 15567 16715 . + 0 ID=cds-WP_000013565.1;Parent=gene-C9E93_RS09865;Dbxref=GenBank:WP_000013565.1;Name=WP_000013565.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9E93_RS09865;product=lactaldehyde reductase;protein_id=WP_000013565.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 16807 17562 . - . ID=gene-C9E93_RS09870;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9E93_RS09870;old_locus_tag=C9E93_10120 NZ_PYJV01000061.1 Protein Homology CDS 16807 17562 . - 0 ID=cds-WP_001519360.1;Parent=gene-C9E93_RS09870;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9E93_RS09870;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 17733 19100 . - . ID=gene-C9E93_RS09880;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=C9E93_RS09880;old_locus_tag=C9E93_10130 NZ_PYJV01000061.1 Protein Homology CDS 17733 19100 . - 0 ID=cds-WP_000626384.1;Parent=gene-C9E93_RS09880;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9E93_RS09880;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 19159 20448 . - . ID=gene-C9E93_RS09885;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9E93_RS09885;old_locus_tag=C9E93_10135 NZ_PYJV01000061.1 Protein Homology CDS 19159 20448 . - 0 ID=cds-WP_000450462.1;Parent=gene-C9E93_RS09885;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9E93_RS09885;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 21013 22377 . - . ID=gene-C9E93_RS09890;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9E93_RS09890;old_locus_tag=C9E93_10140 NZ_PYJV01000061.1 Protein Homology CDS 21013 22377 . - 0 ID=cds-WP_000627973.1;Parent=gene-C9E93_RS09890;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9E93_RS09890;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 22490 23338 . - . ID=gene-C9E93_RS09895;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9E93_RS09895;old_locus_tag=C9E93_10145 NZ_PYJV01000061.1 Protein Homology CDS 22490 23338 . - 0 ID=cds-WP_000100457.1;Parent=gene-C9E93_RS09895;Dbxref=GenBank:WP_000100457.1;Name=WP_000100457.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9E93_RS09895;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100457.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 23407 23952 . + . ID=gene-C9E93_RS09900;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9E93_RS09900;old_locus_tag=C9E93_10150 NZ_PYJV01000061.1 Protein Homology CDS 23407 23952 . + 0 ID=cds-WP_000343990.1;Parent=gene-C9E93_RS09900;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9E93_RS09900;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 24564 24893 . + . ID=gene-C9E93_RS09910;Name=C9E93_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09910;old_locus_tag=C9E93_10160 NZ_PYJV01000061.1 Protein Homology CDS 24564 24893 . + 0 ID=cds-WP_135370630.1;Parent=gene-C9E93_RS09910;Dbxref=GenBank:WP_135370630.1;Name=WP_135370630.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9E93_RS09910;product=YqcC family protein;protein_id=WP_135370630.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 24893 25675 . + . ID=gene-C9E93_RS09915;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9E93_RS09915;old_locus_tag=C9E93_10165 NZ_PYJV01000061.1 Protein Homology CDS 24893 25675 . + 0 ID=cds-WP_001619863.1;Parent=gene-C9E93_RS09915;Dbxref=GenBank:WP_001619863.1;Name=WP_001619863.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9E93_RS09915;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_001619863.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 25694 26143 . + . ID=gene-C9E93_RS09920;Name=C9E93_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09920;old_locus_tag=C9E93_10170 NZ_PYJV01000061.1 Protein Homology CDS 25694 26143 . + 0 ID=cds-WP_000807735.1;Parent=gene-C9E93_RS09920;Dbxref=GenBank:WP_000807735.1;Name=WP_000807735.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9E93_RS09920;product=flavodoxin;protein_id=WP_000807735.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 26292 26540 . - . ID=gene-C9E93_RS09925;Name=C9E93_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09925;old_locus_tag=C9E93_10175 NZ_PYJV01000061.1 GeneMarkS-2+ CDS 26292 26540 . - 0 ID=cds-WP_001531815.1;Parent=gene-C9E93_RS09925;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09925;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 26623 27981 . + . ID=gene-C9E93_RS09930;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9E93_RS09930;old_locus_tag=C9E93_10180 NZ_PYJV01000061.1 Protein Homology CDS 26623 27981 . + 0 ID=cds-WP_000097015.1;Parent=gene-C9E93_RS09930;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9E93_RS09930;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 27978 29318 . + . ID=gene-C9E93_RS09935;Name=C9E93_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09935;old_locus_tag=C9E93_10185 NZ_PYJV01000061.1 Protein Homology CDS 27978 29318 . + 0 ID=cds-WP_000211801.1;Parent=gene-C9E93_RS09935;Dbxref=GenBank:WP_000211801.1;Name=WP_000211801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9E93_RS09935;product=enolase C-terminal domain-like protein;protein_id=WP_000211801.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 29339 30679 . + . ID=gene-C9E93_RS09940;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9E93_RS09940;old_locus_tag=C9E93_10190 NZ_PYJV01000061.1 Protein Homology CDS 29339 30679 . + 0 ID=cds-WP_000107113.1;Parent=gene-C9E93_RS09940;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9E93_RS09940;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 30757 31899 . + . ID=gene-C9E93_RS09945;Name=C9E93_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09945;old_locus_tag=C9E93_10195 NZ_PYJV01000061.1 Protein Homology CDS 30757 31899 . + 0 ID=cds-WP_135370629.1;Parent=gene-C9E93_RS09945;Dbxref=GenBank:WP_135370629.1;Name=WP_135370629.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9E93_RS09945;product=glycerate kinase;protein_id=WP_135370629.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 31943 34699 . - . ID=gene-C9E93_RS09950;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9E93_RS09950;old_locus_tag=C9E93_10200 NZ_PYJV01000061.1 Protein Homology CDS 31943 34699 . - 0 ID=cds-WP_000186400.1;Parent=gene-C9E93_RS09950;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9E93_RS09950;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 34757 36052 . + . ID=gene-C9E93_RS09955;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9E93_RS09955;old_locus_tag=C9E93_10205 NZ_PYJV01000061.1 Protein Homology CDS 34757 36052 . + 0 ID=cds-WP_023232692.1;Parent=gene-C9E93_RS09955;Dbxref=GenBank:WP_023232692.1;Name=WP_023232692.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9E93_RS09955;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_023232692.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 36104 38338 . + . ID=gene-C9E93_RS09960;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9E93_RS09960;old_locus_tag=C9E93_10210 NZ_PYJV01000061.1 Protein Homology CDS 36104 38338 . + 0 ID=cds-WP_000226841.1;Parent=gene-C9E93_RS09960;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9E93_RS09960;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 38422 38778 . + . ID=gene-C9E93_RS09965;Name=C9E93_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09965;old_locus_tag=C9E93_10215 NZ_PYJV01000061.1 Protein Homology CDS 38422 38778 . + 0 ID=cds-WP_000480218.1;Parent=gene-C9E93_RS09965;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9E93_RS09965;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_PYJV01000061.1 RefSeq gene 38744 39040 . + . ID=gene-C9E93_RS09970;Name=C9E93_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09970;old_locus_tag=C9E93_10220 NZ_PYJV01000061.1 Protein Homology CDS 38744 39040 . + 0 ID=cds-WP_001626542.1;Parent=gene-C9E93_RS09970;Dbxref=GenBank:WP_001626542.1;Name=WP_001626542.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9E93_RS09970;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001626542.1;transl_table=11 NZ_PYJV01000061.1 RefSeq pseudogene 39059 39202 . - . ID=gene-C9E93_RS23880;Name=C9E93_RS23880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23880;old_locus_tag=C9E93_10225;partial=true;pseudo=true;start_range=.,39059 NZ_PYJV01000061.1 Protein Homology CDS 39059 39202 . - 0 ID=cds-C9E93_RS23880;Parent=gene-C9E93_RS23880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9E93_RS23880;partial=true;product=fimbrial protein;pseudo=true;start_range=.,39059;transl_table=11 ##sequence-region NZ_PYJV01000036.1 1 121092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000036.1 RefSeq region 1 121092 . + . ID=NZ_PYJV01000036.1:1..121092;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000036.1 RefSeq gene 247 507 . + . ID=gene-C9E93_RS05475;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9E93_RS05475;old_locus_tag=C9E93_05650 NZ_PYJV01000036.1 Protein Homology CDS 247 507 . + 0 ID=cds-WP_001518423.1;Parent=gene-C9E93_RS05475;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9E93_RS05475;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 856 1176 . + . ID=gene-C9E93_RS05480;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9E93_RS05480;old_locus_tag=C9E93_05655 NZ_PYJV01000036.1 Protein Homology CDS 856 1176 . + 0 ID=cds-WP_000705165.1;Parent=gene-C9E93_RS05480;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9E93_RS05480;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 1268 2380 . + . ID=gene-C9E93_RS05485;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9E93_RS05485;old_locus_tag=C9E93_05660 NZ_PYJV01000036.1 Protein Homology CDS 1268 2380 . + 0 ID=cds-WP_135370342.1;Parent=gene-C9E93_RS05485;Dbxref=GenBank:WP_135370342.1;Name=WP_135370342.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9E93_RS05485;product=diguanylate cyclase AdrA;protein_id=WP_135370342.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 2395 3204 . - . ID=gene-C9E93_RS05490;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9E93_RS05490;old_locus_tag=C9E93_05665 NZ_PYJV01000036.1 Protein Homology CDS 2395 3204 . - 0 ID=cds-WP_000412193.1;Parent=gene-C9E93_RS05490;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9E93_RS05490;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 3344 3799 . + . ID=gene-C9E93_RS05495;Name=C9E93_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05495;old_locus_tag=C9E93_05670 NZ_PYJV01000036.1 Protein Homology CDS 3344 3799 . + 0 ID=cds-WP_000158134.1;Parent=gene-C9E93_RS05495;Dbxref=GenBank:WP_000158134.1;Name=WP_000158134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9E93_RS05495;product=YaiI/YqxD family protein;protein_id=WP_000158134.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 3984 4529 . + . ID=gene-C9E93_RS05500;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9E93_RS05500;old_locus_tag=C9E93_05675 NZ_PYJV01000036.1 Protein Homology CDS 3984 4529 . + 0 ID=cds-WP_000983569.1;Parent=gene-C9E93_RS05500;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9E93_RS05500;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 4556 4747 . + . ID=gene-C9E93_RS05505;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9E93_RS05505;old_locus_tag=C9E93_05680 NZ_PYJV01000036.1 Protein Homology CDS 4556 4747 . + 0 ID=cds-WP_001143161.1;Parent=gene-C9E93_RS05505;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9E93_RS05505;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 4998 5675 . + . ID=gene-C9E93_RS05510;Name=C9E93_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05510;old_locus_tag=C9E93_05685 NZ_PYJV01000036.1 Protein Homology CDS 4998 5675 . + 0 ID=cds-WP_001276437.1;Parent=gene-C9E93_RS05510;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9E93_RS05510;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 5746 6030 . + . ID=gene-C9E93_RS05515;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9E93_RS05515;old_locus_tag=C9E93_05690 NZ_PYJV01000036.1 Protein Homology CDS 5746 6030 . + 0 ID=cds-WP_000941953.1;Parent=gene-C9E93_RS05515;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9E93_RS05515;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 6073 6984 . - . ID=gene-C9E93_RS05520;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9E93_RS05520;old_locus_tag=C9E93_05695 NZ_PYJV01000036.1 Protein Homology CDS 6073 6984 . - 0 ID=cds-WP_000964305.1;Parent=gene-C9E93_RS05520;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9E93_RS05520;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 7110 8018 . + . ID=gene-C9E93_RS05525;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=C9E93_RS05525;old_locus_tag=C9E93_05700 NZ_PYJV01000036.1 Protein Homology CDS 7110 8018 . + 0 ID=cds-WP_135370343.1;Parent=gene-C9E93_RS05525;Dbxref=GenBank:WP_135370343.1;Name=WP_135370343.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9E93_RS05525;product=fructokinase;protein_id=WP_135370343.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 8040 9212 . - . ID=gene-C9E93_RS05530;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=C9E93_RS05530;old_locus_tag=C9E93_05705 NZ_PYJV01000036.1 Protein Homology CDS 8040 9212 . - 0 ID=cds-WP_135370344.1;Parent=gene-C9E93_RS05530;Dbxref=GenBank:WP_135370344.1;Name=WP_135370344.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9E93_RS05530;product=MFS transporter AraJ;protein_id=WP_135370344.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 9385 12525 . - . ID=gene-C9E93_RS05535;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9E93_RS05535;old_locus_tag=C9E93_05710 NZ_PYJV01000036.1 Protein Homology CDS 9385 12525 . - 0 ID=cds-WP_135370345.1;Parent=gene-C9E93_RS05535;Dbxref=GenBank:WP_135370345.1;Name=WP_135370345.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9E93_RS05535;product=exonuclease subunit SbcC;protein_id=WP_135370345.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 12522 13724 . - . ID=gene-C9E93_RS05540;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9E93_RS05540;old_locus_tag=C9E93_05715 NZ_PYJV01000036.1 Protein Homology CDS 12522 13724 . - 0 ID=cds-WP_001221254.1;Parent=gene-C9E93_RS05540;Dbxref=GenBank:WP_001221254.1;Name=WP_001221254.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9E93_RS05540;product=exonuclease subunit SbcD;protein_id=WP_001221254.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 13939 14628 . + . ID=gene-C9E93_RS05545;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9E93_RS05545;old_locus_tag=C9E93_05720 NZ_PYJV01000036.1 Protein Homology CDS 13939 14628 . + 0 ID=cds-WP_000113921.1;Parent=gene-C9E93_RS05545;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9E93_RS05545;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 14698 15993 . + . ID=gene-C9E93_RS05550;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9E93_RS05550;old_locus_tag=C9E93_05725 NZ_PYJV01000036.1 Protein Homology CDS 14698 15993 . + 0 ID=cds-WP_000893642.1;Parent=gene-C9E93_RS05550;Dbxref=GenBank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9E93_RS05550;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 16402 17721 . + . ID=gene-C9E93_RS05555;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9E93_RS05555;old_locus_tag=C9E93_05730 NZ_PYJV01000036.1 Protein Homology CDS 16402 17721 . + 0 ID=cds-WP_000149625.1;Parent=gene-C9E93_RS05555;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9E93_RS05555;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 17796 19166 . + . ID=gene-C9E93_RS05560;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9E93_RS05560;old_locus_tag=C9E93_05735 NZ_PYJV01000036.1 Protein Homology CDS 17796 19166 . + 0 ID=cds-WP_001537837.1;Parent=gene-C9E93_RS05560;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9E93_RS05560;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 19328 21145 . + . ID=gene-C9E93_RS05565;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=C9E93_RS05565;old_locus_tag=C9E93_05740 NZ_PYJV01000036.1 Protein Homology CDS 19328 21145 . + 0 ID=cds-WP_135370346.1;Parent=gene-C9E93_RS05565;Dbxref=GenBank:WP_135370346.1;Name=WP_135370346.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9E93_RS05565;product=maltodextrin glucosidase;protein_id=WP_135370346.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 21217 21819 . - . ID=gene-C9E93_RS05570;Name=C9E93_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05570;old_locus_tag=C9E93_05745 NZ_PYJV01000036.1 Protein Homology CDS 21217 21819 . - 0 ID=cds-WP_000244731.1;Parent=gene-C9E93_RS05570;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9E93_RS05570;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 22029 22610 . - . ID=gene-C9E93_RS05575;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9E93_RS05575;old_locus_tag=C9E93_05750 NZ_PYJV01000036.1 Protein Homology CDS 22029 22610 . - 0 ID=cds-WP_001009858.1;Parent=gene-C9E93_RS05575;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9E93_RS05575;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 22704 23768 . + . ID=gene-C9E93_RS05580;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9E93_RS05580;old_locus_tag=C9E93_05755 NZ_PYJV01000036.1 Protein Homology CDS 22704 23768 . + 0 ID=cds-WP_001266530.1;Parent=gene-C9E93_RS05580;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9E93_RS05580;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 23965 25092 . + . ID=gene-C9E93_RS05585;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9E93_RS05585;old_locus_tag=C9E93_05765 NZ_PYJV01000036.1 Protein Homology CDS 23965 25092 . + 0 ID=cds-WP_000667305.1;Parent=gene-C9E93_RS05585;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9E93_RS05585;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 25115 25447 . + . ID=gene-C9E93_RS05590;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9E93_RS05590;old_locus_tag=C9E93_05770 NZ_PYJV01000036.1 Protein Homology CDS 25115 25447 . + 0 ID=cds-WP_000007628.1;Parent=gene-C9E93_RS05590;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9E93_RS05590;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 25475 27322 . + . ID=gene-C9E93_RS05595;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9E93_RS05595;old_locus_tag=C9E93_05775 NZ_PYJV01000036.1 Protein Homology CDS 25475 27322 . + 0 ID=cds-WP_000934811.1;Parent=gene-C9E93_RS05595;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9E93_RS05595;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 27333 28304 . + . ID=gene-C9E93_RS05600;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9E93_RS05600;old_locus_tag=C9E93_05780 NZ_PYJV01000036.1 Protein Homology CDS 27333 28304 . + 0 ID=cds-WP_000046629.1;Parent=gene-C9E93_RS05600;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9E93_RS05600;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 28449 28814 . + . ID=gene-C9E93_RS05605;Name=C9E93_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05605;old_locus_tag=C9E93_05785 NZ_PYJV01000036.1 Protein Homology CDS 28449 28814 . + 0 ID=cds-WP_000793035.1;Parent=gene-C9E93_RS05605;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=C9E93_RS05605;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 28840 29532 . + . ID=gene-C9E93_RS05610;Name=C9E93_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05610;old_locus_tag=C9E93_05790 NZ_PYJV01000036.1 Protein Homology CDS 28840 29532 . + 0 ID=cds-WP_023182339.1;Parent=gene-C9E93_RS05610;Dbxref=GenBank:WP_023182339.1;Name=WP_023182339.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=C9E93_RS05610;product=helix-turn-helix transcriptional regulator;protein_id=WP_023182339.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 29702 30049 . + . ID=gene-C9E93_RS05615;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9E93_RS05615;old_locus_tag=C9E93_05795 NZ_PYJV01000036.1 Protein Homology CDS 29702 30049 . + 0 ID=cds-WP_000974818.1;Parent=gene-C9E93_RS05615;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9E93_RS05615;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 30487 30594 . + . ID=gene-C9E93_RS05625;Name=C9E93_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05625 NZ_PYJV01000036.1 Protein Homology CDS 30487 30594 . + 0 ID=cds-WP_000176312.1;Parent=gene-C9E93_RS05625;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9E93_RS05625;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 30678 31541 . - . ID=gene-C9E93_RS05630;Name=C9E93_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05630;old_locus_tag=C9E93_05810 NZ_PYJV01000036.1 Protein Homology CDS 30678 31541 . - 0 ID=cds-WP_135370347.1;Parent=gene-C9E93_RS05630;Dbxref=GenBank:WP_135370347.1;Name=WP_135370347.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9E93_RS05630;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_135370347.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 31841 32380 . - . ID=gene-C9E93_RS05635;Name=C9E93_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05635;old_locus_tag=C9E93_05815 NZ_PYJV01000036.1 Protein Homology CDS 31841 32380 . - 0 ID=cds-WP_135370348.1;Parent=gene-C9E93_RS05635;Dbxref=GenBank:WP_135370348.1;Name=WP_135370348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9E93_RS05635;product=DUF3251 domain-containing protein;protein_id=WP_135370348.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 32532 32981 . + . ID=gene-C9E93_RS05640;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9E93_RS05640;old_locus_tag=C9E93_05820 NZ_PYJV01000036.1 Protein Homology CDS 32532 32981 . + 0 ID=cds-WP_000543533.1;Parent=gene-C9E93_RS05640;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9E93_RS05640;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 32985 34088 . + . ID=gene-C9E93_RS05645;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9E93_RS05645;old_locus_tag=C9E93_05825 NZ_PYJV01000036.1 Protein Homology CDS 32985 34088 . + 0 ID=cds-WP_001150216.1;Parent=gene-C9E93_RS05645;Dbxref=GenBank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9E93_RS05645;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 34177 34647 . + . ID=gene-C9E93_RS05650;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=C9E93_RS05650;old_locus_tag=C9E93_05830 NZ_PYJV01000036.1 Protein Homology CDS 34177 34647 . + 0 ID=cds-WP_001021372.1;Parent=gene-C9E93_RS05650;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9E93_RS05650;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 34668 35087 . + . ID=gene-C9E93_RS05655;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9E93_RS05655;old_locus_tag=C9E93_05835 NZ_PYJV01000036.1 Protein Homology CDS 34668 35087 . + 0 ID=cds-WP_000801129.1;Parent=gene-C9E93_RS05655;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9E93_RS05655;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 35169 36149 . + . ID=gene-C9E93_RS05660;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9E93_RS05660;old_locus_tag=C9E93_05840 NZ_PYJV01000036.1 Protein Homology CDS 35169 36149 . + 0 ID=cds-WP_000752133.1;Parent=gene-C9E93_RS05660;Dbxref=GenBank:WP_000752133.1;Name=WP_000752133.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9E93_RS05660;product=thiamine-phosphate kinase;protein_id=WP_000752133.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 36127 36642 . + . ID=gene-C9E93_RS05665;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9E93_RS05665;old_locus_tag=C9E93_05845 NZ_PYJV01000036.1 Protein Homology CDS 36127 36642 . + 0 ID=cds-WP_000154063.1;Parent=gene-C9E93_RS05665;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9E93_RS05665;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_PYJV01000036.1 RefSeq pseudogene 36647 36738 . - . ID=gene-C9E93_RS24150;Name=C9E93_RS24150;end_range=36738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24150;partial=true;pseudo=true;start_range=.,36647 NZ_PYJV01000036.1 Protein Homology CDS 36647 36738 . - 0 ID=cds-C9E93_RS24150;Parent=gene-C9E93_RS24150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=36738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E93_RS24150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,36647;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 36746 37720 . - . ID=gene-C9E93_RS05670;Name=C9E93_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05670;old_locus_tag=C9E93_05850 NZ_PYJV01000036.1 Protein Homology CDS 36746 37720 . - 0 ID=cds-WP_001199870.1;Parent=gene-C9E93_RS05670;Dbxref=GenBank:WP_001199870.1;Name=WP_001199870.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9E93_RS05670;product=aldo/keto reductase;protein_id=WP_001199870.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 37777 39639 . - . ID=gene-C9E93_RS05675;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9E93_RS05675;old_locus_tag=C9E93_05855 NZ_PYJV01000036.1 Protein Homology CDS 37777 39639 . - 0 ID=cds-WP_000006777.1;Parent=gene-C9E93_RS05675;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9E93_RS05675;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 39663 40562 . - . ID=gene-C9E93_RS05680;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9E93_RS05680;old_locus_tag=C9E93_05860 NZ_PYJV01000036.1 Protein Homology CDS 39663 40562 . - 0 ID=cds-WP_000348074.1;Parent=gene-C9E93_RS05680;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9E93_RS05680;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 40563 40805 . - . ID=gene-C9E93_RS05685;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9E93_RS05685;old_locus_tag=C9E93_05865 NZ_PYJV01000036.1 Protein Homology CDS 40563 40805 . - 0 ID=cds-WP_001124944.1;Parent=gene-C9E93_RS05685;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9E93_RS05685;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 41015 42463 . + . ID=gene-C9E93_RS05690;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9E93_RS05690;old_locus_tag=C9E93_05870 NZ_PYJV01000036.1 Protein Homology CDS 41015 42463 . + 0 ID=cds-WP_000668648.1;Parent=gene-C9E93_RS05690;Dbxref=GenBank:WP_000668648.1;Name=WP_000668648.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9E93_RS05690;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668648.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 42507 43304 . - . ID=gene-C9E93_RS05695;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9E93_RS05695;old_locus_tag=C9E93_05875 NZ_PYJV01000036.1 Protein Homology CDS 42507 43304 . - 0 ID=cds-WP_000909792.1;Parent=gene-C9E93_RS05695;Dbxref=GenBank:WP_000909792.1;Name=WP_000909792.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9E93_RS05695;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909792.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 43307 44167 . - . ID=gene-C9E93_RS05700;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9E93_RS05700;old_locus_tag=C9E93_05880 NZ_PYJV01000036.1 Protein Homology CDS 43307 44167 . - 0 ID=cds-WP_135370349.1;Parent=gene-C9E93_RS05700;Dbxref=GenBank:WP_135370349.1;Name=WP_135370349.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9E93_RS05700;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_135370349.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 44170 45279 . - . ID=gene-C9E93_RS05705;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9E93_RS05705;old_locus_tag=C9E93_05885 NZ_PYJV01000036.1 Protein Homology CDS 44170 45279 . - 0 ID=cds-WP_000928787.1;Parent=gene-C9E93_RS05705;Dbxref=GenBank:WP_000928787.1;Name=WP_000928787.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9E93_RS05705;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928787.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 45285 46298 . - . ID=gene-C9E93_RS05710;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9E93_RS05710;old_locus_tag=C9E93_05890 NZ_PYJV01000036.1 Protein Homology CDS 45285 46298 . - 0 ID=cds-WP_000778008.1;Parent=gene-C9E93_RS05710;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9E93_RS05710;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 46496 47215 . - . ID=gene-C9E93_RS05715;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9E93_RS05715;old_locus_tag=C9E93_05895 NZ_PYJV01000036.1 Protein Homology CDS 46496 47215 . - 0 ID=cds-WP_000836268.1;Parent=gene-C9E93_RS05715;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9E93_RS05715;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 47355 48458 . + . ID=gene-C9E93_RS05720;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9E93_RS05720;old_locus_tag=C9E93_05900 NZ_PYJV01000036.1 Protein Homology CDS 47355 48458 . + 0 ID=cds-WP_000203971.1;Parent=gene-C9E93_RS05720;Dbxref=GenBank:WP_000203971.1;Name=WP_000203971.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9E93_RS05720;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000203971.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 48468 49277 . + . ID=gene-C9E93_RS05725;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=C9E93_RS05725;old_locus_tag=C9E93_05905 NZ_PYJV01000036.1 Protein Homology CDS 48468 49277 . + 0 ID=cds-WP_001526311.1;Parent=gene-C9E93_RS05725;Dbxref=GenBank:WP_001526311.1;Name=WP_001526311.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9E93_RS05725;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001526311.1;transl_table=11 NZ_PYJV01000036.1 RefSeq pseudogene 49283 49365 . + . ID=gene-C9E93_RS24155;Name=C9E93_RS24155;end_range=49365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24155;partial=true;pseudo=true;start_range=.,49283 NZ_PYJV01000036.1 Protein Homology CDS 49283 49365 . + 0 ID=cds-C9E93_RS24155;Parent=gene-C9E93_RS24155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=49365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E93_RS24155;partial=true;product=hypothetical protein;pseudo=true;start_range=.,49283;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 49374 49964 . - . ID=gene-C9E93_RS05730;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9E93_RS05730;old_locus_tag=C9E93_05910 NZ_PYJV01000036.1 Protein Homology CDS 49374 49964 . - 0 ID=cds-WP_001275807.1;Parent=gene-C9E93_RS05730;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9E93_RS05730;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 49927 50838 . - . ID=gene-C9E93_RS05735;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9E93_RS05735;old_locus_tag=C9E93_05915 NZ_PYJV01000036.1 Protein Homology CDS 49927 50838 . - 0 ID=cds-WP_000705816.1;Parent=gene-C9E93_RS05735;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9E93_RS05735;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 50964 51455 . + . ID=gene-C9E93_RS05740;Name=C9E93_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05740;old_locus_tag=C9E93_05920 NZ_PYJV01000036.1 Protein Homology CDS 50964 51455 . + 0 ID=cds-WP_001138913.1;Parent=gene-C9E93_RS05740;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E93_RS05740;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 51502 52866 . - . ID=gene-C9E93_RS05745;Name=C9E93_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05745;old_locus_tag=C9E93_05925 NZ_PYJV01000036.1 Protein Homology CDS 51502 52866 . - 0 ID=cds-WP_001000938.1;Parent=gene-C9E93_RS05745;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9E93_RS05745;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 53392 54903 . + . ID=gene-C9E93_RS05755;Name=C9E93_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05755;old_locus_tag=C9E93_05935 NZ_PYJV01000036.1 Protein Homology CDS 53392 54903 . + 0 ID=cds-WP_135400598.1;Parent=gene-C9E93_RS05755;Dbxref=GenBank:WP_135400598.1;Name=WP_135400598.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9E93_RS05755;product=SEL1-like repeat protein;protein_id=WP_135400598.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 54915 56384 . + . ID=gene-C9E93_RS05760;Name=C9E93_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05760;old_locus_tag=C9E93_05940 NZ_PYJV01000036.1 Protein Homology CDS 54915 56384 . + 0 ID=cds-WP_135370094.1;Parent=gene-C9E93_RS05760;Dbxref=GenBank:WP_135370094.1;Name=WP_135370094.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524005.1;locus_tag=C9E93_RS05760;product=SEL1-like repeat protein;protein_id=WP_135370094.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 56432 57322 . - . ID=gene-C9E93_RS05765;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9E93_RS05765;old_locus_tag=C9E93_05945 NZ_PYJV01000036.1 Protein Homology CDS 56432 57322 . - 0 ID=cds-WP_000971352.1;Parent=gene-C9E93_RS05765;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9E93_RS05765;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 57334 57663 . - . ID=gene-C9E93_RS05770;Name=C9E93_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05770;old_locus_tag=C9E93_05950 NZ_PYJV01000036.1 Protein Homology CDS 57334 57663 . - 0 ID=cds-WP_000019878.1;Parent=gene-C9E93_RS05770;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9E93_RS05770;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 57663 58277 . - . ID=gene-C9E93_RS05775;Name=C9E93_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05775;old_locus_tag=C9E93_05955 NZ_PYJV01000036.1 Protein Homology CDS 57663 58277 . - 0 ID=cds-WP_000179833.1;Parent=gene-C9E93_RS05775;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9E93_RS05775;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 58267 60258 . - . ID=gene-C9E93_RS05780;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=C9E93_RS05780;old_locus_tag=C9E93_05960 NZ_PYJV01000036.1 Protein Homology CDS 58267 60258 . - 0 ID=cds-WP_000467158.1;Parent=gene-C9E93_RS05780;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9E93_RS05780;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 60269 61225 . - . ID=gene-C9E93_RS05785;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9E93_RS05785;old_locus_tag=C9E93_05965 NZ_PYJV01000036.1 Protein Homology CDS 60269 61225 . - 0 ID=cds-WP_001239448.1;Parent=gene-C9E93_RS05785;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9E93_RS05785;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 61678 63153 . - . ID=gene-C9E93_RS05790;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9E93_RS05790;old_locus_tag=C9E93_05970 NZ_PYJV01000036.1 Protein Homology CDS 61678 63153 . - 0 ID=cds-WP_135369953.1;Parent=gene-C9E93_RS05790;Dbxref=GenBank:WP_135369953.1;Name=WP_135369953.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9E93_RS05790;product=muropeptide MFS transporter AmpG;protein_id=WP_135369953.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 63197 63775 . - . ID=gene-C9E93_RS05795;Name=C9E93_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05795;old_locus_tag=C9E93_05975 NZ_PYJV01000036.1 Protein Homology CDS 63197 63775 . - 0 ID=cds-WP_001537832.1;Parent=gene-C9E93_RS05795;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9E93_RS05795;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 64079 64396 . + . ID=gene-C9E93_RS05800;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9E93_RS05800;old_locus_tag=C9E93_05985 NZ_PYJV01000036.1 Protein Homology CDS 64079 64396 . + 0 ID=cds-WP_000973433.1;Parent=gene-C9E93_RS05800;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9E93_RS05800;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 64743 66041 . + . ID=gene-C9E93_RS05810;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9E93_RS05810;old_locus_tag=C9E93_05995 NZ_PYJV01000036.1 Protein Homology CDS 64743 66041 . + 0 ID=cds-WP_001198406.1;Parent=gene-C9E93_RS05810;Dbxref=GenBank:WP_001198406.1;Name=WP_001198406.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9E93_RS05810;product=trigger factor;protein_id=WP_001198406.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 66288 66911 . + . ID=gene-C9E93_RS05815;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9E93_RS05815;old_locus_tag=C9E93_06000 NZ_PYJV01000036.1 Protein Homology CDS 66288 66911 . + 0 ID=cds-WP_000122257.1;Parent=gene-C9E93_RS05815;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9E93_RS05815;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 67163 68434 . + . ID=gene-C9E93_RS05820;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9E93_RS05820;old_locus_tag=C9E93_06005 NZ_PYJV01000036.1 Protein Homology CDS 67163 68434 . + 0 ID=cds-WP_000130314.1;Parent=gene-C9E93_RS05820;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9E93_RS05820;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 68620 70974 . + . ID=gene-C9E93_RS05825;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9E93_RS05825;old_locus_tag=C9E93_06010 NZ_PYJV01000036.1 Protein Homology CDS 68620 70974 . + 0 ID=cds-WP_001067723.1;Parent=gene-C9E93_RS05825;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9E93_RS05825;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 71165 71455 . + . ID=gene-C9E93_RS05830;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9E93_RS05830;old_locus_tag=C9E93_06015 NZ_PYJV01000036.1 Protein Homology CDS 71165 71455 . + 0 ID=cds-WP_254888479.1;Parent=gene-C9E93_RS05830;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9E93_RS05830;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 71746 73617 . + . ID=gene-C9E93_RS05835;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9E93_RS05835;old_locus_tag=C9E93_06020 NZ_PYJV01000036.1 Protein Homology CDS 71746 73617 . + 0 ID=cds-WP_000969434.1;Parent=gene-C9E93_RS05835;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9E93_RS05835;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 73767 74141 . + . ID=gene-C9E93_RS05840;Name=C9E93_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05840;old_locus_tag=C9E93_06025 NZ_PYJV01000036.1 Protein Homology CDS 73767 74141 . + 0 ID=cds-WP_000680322.1;Parent=gene-C9E93_RS05840;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9E93_RS05840;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 74245 74643 . + . ID=gene-C9E93_RS05845;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9E93_RS05845;old_locus_tag=C9E93_06030 NZ_PYJV01000036.1 Protein Homology CDS 74245 74643 . + 0 ID=cds-WP_001194543.1;Parent=gene-C9E93_RS05845;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9E93_RS05845;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 74749 75444 . - . ID=gene-C9E93_RS05850;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9E93_RS05850;old_locus_tag=C9E93_06035 NZ_PYJV01000036.1 Protein Homology CDS 74749 75444 . - 0 ID=cds-WP_000817201.1;Parent=gene-C9E93_RS05850;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9E93_RS05850;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 75509 77209 . - . ID=gene-C9E93_RS05855;Name=C9E93_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05855;old_locus_tag=C9E93_06040 NZ_PYJV01000036.1 Protein Homology CDS 75509 77209 . - 0 ID=cds-WP_001238174.1;Parent=gene-C9E93_RS05855;Dbxref=GenBank:WP_001238174.1;Name=WP_001238174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=C9E93_RS05855;product=SgrR family transcriptional regulator;protein_id=WP_001238174.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 77310 78128 . + . ID=gene-C9E93_RS05860;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9E93_RS05860;old_locus_tag=C9E93_06045 NZ_PYJV01000036.1 Protein Homology CDS 77310 78128 . + 0 ID=cds-WP_000113035.1;Parent=gene-C9E93_RS05860;Dbxref=GenBank:WP_000113035.1;Name=WP_000113035.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9E93_RS05860;product=HMP-PP phosphatase;protein_id=WP_000113035.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 78178 79233 . - . ID=gene-C9E93_RS05865;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9E93_RS05865;old_locus_tag=C9E93_06050 NZ_PYJV01000036.1 Protein Homology CDS 78178 79233 . - 0 ID=cds-WP_000987850.1;Parent=gene-C9E93_RS05865;Dbxref=GenBank:WP_000987850.1;Name=WP_000987850.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9E93_RS05865;product=cysteine desulfhydrase;protein_id=WP_000987850.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 79346 79804 . + . ID=gene-C9E93_RS05870;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9E93_RS05870;old_locus_tag=C9E93_06055 NZ_PYJV01000036.1 Protein Homology CDS 79346 79804 . + 0 ID=cds-WP_000884593.1;Parent=gene-C9E93_RS05870;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9E93_RS05870;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 79845 81617 . + . ID=gene-C9E93_RS05875;Name=C9E93_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05875;old_locus_tag=C9E93_06060 NZ_PYJV01000036.1 Protein Homology CDS 79845 81617 . + 0 ID=cds-WP_001235563.1;Parent=gene-C9E93_RS05875;Dbxref=GenBank:WP_001235563.1;Name=WP_001235563.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9E93_RS05875;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235563.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 81610 83391 . + . ID=gene-C9E93_RS05880;Name=C9E93_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05880;old_locus_tag=C9E93_06065 NZ_PYJV01000036.1 Protein Homology CDS 81610 83391 . + 0 ID=cds-WP_001256070.1;Parent=gene-C9E93_RS05880;Dbxref=GenBank:WP_001256070.1;Name=WP_001256070.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9E93_RS05880;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256070.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 83604 83942 . + . ID=gene-C9E93_RS05890;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9E93_RS05890;old_locus_tag=C9E93_06075 NZ_PYJV01000036.1 Protein Homology CDS 83604 83942 . + 0 ID=cds-WP_000780341.1;Parent=gene-C9E93_RS05890;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9E93_RS05890;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 83974 85260 . + . ID=gene-C9E93_RS05895;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9E93_RS05895;old_locus_tag=C9E93_06080 NZ_PYJV01000036.1 Protein Homology CDS 83974 85260 . + 0 ID=cds-WP_000684912.1;Parent=gene-C9E93_RS05895;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9E93_RS05895;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 85360 86220 . - . ID=gene-C9E93_RS05900;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9E93_RS05900;old_locus_tag=C9E93_06085 NZ_PYJV01000036.1 Protein Homology CDS 85360 86220 . - 0 ID=cds-WP_000084180.1;Parent=gene-C9E93_RS05900;Dbxref=GenBank:WP_000084180.1;Name=WP_000084180.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9E93_RS05900;product=acyl-CoA thioesterase II;protein_id=WP_000084180.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 86435 87004 . + . ID=gene-C9E93_RS05905;Name=C9E93_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05905;old_locus_tag=C9E93_06090 NZ_PYJV01000036.1 Protein Homology CDS 86435 87004 . + 0 ID=cds-WP_000779803.1;Parent=gene-C9E93_RS05905;Dbxref=GenBank:WP_000779803.1;Name=WP_000779803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9E93_RS05905;product=YbaY family lipoprotein;protein_id=WP_000779803.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 87037 87426 . - . ID=gene-C9E93_RS05910;Name=C9E93_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05910;old_locus_tag=C9E93_06095 NZ_PYJV01000036.1 Protein Homology CDS 87037 87426 . - 0 ID=cds-WP_000961285.1;Parent=gene-C9E93_RS05910;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9E93_RS05910;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 87511 87607 . + . ID=gene-C9E93_RS05915;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9E93_RS05915;old_locus_tag=C9E93_06100 NZ_PYJV01000036.1 cmsearch SRP_RNA 87511 87607 . + . ID=rna-C9E93_RS05915;Parent=gene-C9E93_RS05915;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05915;product=signal recognition particle sRNA small type NZ_PYJV01000036.1 cmsearch exon 87511 87607 . + . ID=exon-C9E93_RS05915-1;Parent=rna-C9E93_RS05915;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS05915;product=signal recognition particle sRNA small type NZ_PYJV01000036.1 RefSeq gene 87657 89207 . - . ID=gene-C9E93_RS05920;Name=C9E93_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05920;old_locus_tag=C9E93_06105 NZ_PYJV01000036.1 Protein Homology CDS 87657 89207 . - 0 ID=cds-WP_000213139.1;Parent=gene-C9E93_RS05920;Dbxref=GenBank:WP_000213139.1;Name=WP_000213139.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9E93_RS05920;product=EAL domain-containing protein;protein_id=WP_000213139.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 89432 89692 . + . ID=gene-C9E93_RS05925;Name=C9E93_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05925;old_locus_tag=C9E93_06110 NZ_PYJV01000036.1 Protein Homology CDS 89432 89692 . + 0 ID=cds-WP_000801415.1;Parent=gene-C9E93_RS05925;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9E93_RS05925;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 89698 89838 . + . ID=gene-C9E93_RS05930;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9E93_RS05930;old_locus_tag=C9E93_06115 NZ_PYJV01000036.1 Protein Homology CDS 89698 89838 . + 0 ID=cds-WP_001197749.1;Parent=gene-C9E93_RS05930;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9E93_RS05930;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 89894 90364 . - . ID=gene-C9E93_RS05935;Name=C9E93_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05935;old_locus_tag=C9E93_06120 NZ_PYJV01000036.1 Protein Homology CDS 89894 90364 . - 0 ID=cds-WP_000136181.1;Parent=gene-C9E93_RS05935;Dbxref=GenBank:WP_000136181.1;Name=WP_000136181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9E93_RS05935;product=YlaC family protein;protein_id=WP_000136181.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 90480 91031 . - . ID=gene-C9E93_RS05940;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9E93_RS05940;old_locus_tag=C9E93_06125 NZ_PYJV01000036.1 Protein Homology CDS 90480 91031 . - 0 ID=cds-WP_001278793.1;Parent=gene-C9E93_RS05940;Dbxref=GenBank:WP_001278793.1;Name=WP_001278793.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9E93_RS05940;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 91210 91428 . - . ID=gene-C9E93_RS05945;Name=C9E93_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05945;old_locus_tag=C9E93_06130 NZ_PYJV01000036.1 Protein Homology CDS 91210 91428 . - 0 ID=cds-WP_001280991.1;Parent=gene-C9E93_RS05945;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9E93_RS05945;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 91456 91830 . - . ID=gene-C9E93_RS05950;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9E93_RS05950;old_locus_tag=C9E93_06135 NZ_PYJV01000036.1 Protein Homology CDS 91456 91830 . - 0 ID=cds-WP_000344807.1;Parent=gene-C9E93_RS05950;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9E93_RS05950;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 92326 95475 . - . ID=gene-C9E93_RS05955;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=C9E93_RS05955;old_locus_tag=C9E93_06140 NZ_PYJV01000036.1 Protein Homology CDS 92326 95475 . - 0 ID=cds-WP_001132508.1;Parent=gene-C9E93_RS05955;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9E93_RS05955;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 95498 96691 . - . ID=gene-C9E93_RS05960;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9E93_RS05960;old_locus_tag=C9E93_06145 NZ_PYJV01000036.1 Protein Homology CDS 95498 96691 . - 0 ID=cds-WP_001039199.1;Parent=gene-C9E93_RS05960;Dbxref=GenBank:WP_001039199.1;Name=WP_001039199.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9E93_RS05960;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039199.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 96833 97486 . + . ID=gene-C9E93_RS05965;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9E93_RS05965;old_locus_tag=C9E93_06150 NZ_PYJV01000036.1 Protein Homology CDS 96833 97486 . + 0 ID=cds-WP_000101755.1;Parent=gene-C9E93_RS05965;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9E93_RS05965;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 97605 100967 . + . ID=gene-C9E93_RS05970;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9E93_RS05970;old_locus_tag=C9E93_06155 NZ_PYJV01000036.1 Protein Homology CDS 97605 100967 . + 0 ID=cds-WP_000178249.1;Parent=gene-C9E93_RS05970;Dbxref=GenBank:WP_000178249.1;Name=WP_000178249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9E93_RS05970;product=mechanosensitive channel MscK;protein_id=WP_000178249.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 101009 101944 . - . ID=gene-C9E93_RS05975;Name=C9E93_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05975;old_locus_tag=C9E93_06160 NZ_PYJV01000036.1 Protein Homology CDS 101009 101944 . - 0 ID=cds-WP_000440526.1;Parent=gene-C9E93_RS05975;Dbxref=GenBank:WP_000440526.1;Name=WP_000440526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9E93_RS05975;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440526.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 102014 102181 . - . ID=gene-C9E93_RS05980;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=C9E93_RS05980;old_locus_tag=C9E93_06165 NZ_PYJV01000036.1 Protein Homology CDS 102014 102181 . - 0 ID=cds-WP_000051161.1;Parent=gene-C9E93_RS05980;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9E93_RS05980;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 102195 102722 . - . ID=gene-C9E93_RS05985;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9E93_RS05985;old_locus_tag=C9E93_06170 NZ_PYJV01000036.1 Protein Homology CDS 102195 102722 . - 0 ID=cds-WP_001575715.1;Parent=gene-C9E93_RS05985;Dbxref=GenBank:WP_001575715.1;Name=WP_001575715.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9E93_RS05985;product=primosomal replication protein N'';protein_id=WP_001575715.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 102791 103168 . + . ID=gene-C9E93_RS05990;Name=C9E93_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS05990;old_locus_tag=C9E93_06175 NZ_PYJV01000036.1 Protein Homology CDS 102791 103168 . + 0 ID=cds-WP_001189860.1;Parent=gene-C9E93_RS05990;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9E93_RS05990;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 103321 103872 . + . ID=gene-C9E93_RS05995;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9E93_RS05995;old_locus_tag=C9E93_06185 NZ_PYJV01000036.1 Protein Homology CDS 103321 103872 . + 0 ID=cds-WP_000127352.1;Parent=gene-C9E93_RS05995;Dbxref=GenBank:WP_000127352.1;Name=WP_000127352.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9E93_RS05995;product=adenine phosphoribosyltransferase;protein_id=WP_000127352.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 103986 105914 . + . ID=gene-C9E93_RS06000;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=C9E93_RS06000;old_locus_tag=C9E93_06190 NZ_PYJV01000036.1 Protein Homology CDS 103986 105914 . + 0 ID=cds-WP_079942822.1;Parent=gene-C9E93_RS06000;Dbxref=GenBank:WP_079942822.1;Name=WP_079942822.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9E93_RS06000;product=DNA polymerase III subunit gamma/tau;protein_id=WP_079942822.1;transl_table=11 NZ_PYJV01000036.1 cmsearch sequence_feature 105247 105311 . + . ID=id-C9E93_RS06000;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS06000 NZ_PYJV01000036.1 RefSeq gene 105960 106289 . + . ID=gene-C9E93_RS06005;Name=C9E93_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06005;old_locus_tag=C9E93_06195 NZ_PYJV01000036.1 Protein Homology CDS 105960 106289 . + 0 ID=cds-WP_000467098.1;Parent=gene-C9E93_RS06005;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9E93_RS06005;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 106289 106894 . + . ID=gene-C9E93_RS06010;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9E93_RS06010;old_locus_tag=C9E93_06200 NZ_PYJV01000036.1 Protein Homology CDS 106289 106894 . + 0 ID=cds-WP_001195023.1;Parent=gene-C9E93_RS06010;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9E93_RS06010;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 107005 108879 . + . ID=gene-C9E93_RS06015;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9E93_RS06015;old_locus_tag=C9E93_06205 NZ_PYJV01000036.1 Protein Homology CDS 107005 108879 . + 0 ID=cds-WP_001523272.1;Parent=gene-C9E93_RS06015;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9E93_RS06015;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 109237 109881 . + . ID=gene-C9E93_RS06020;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9E93_RS06020;old_locus_tag=C9E93_06215 NZ_PYJV01000036.1 Protein Homology CDS 109237 109881 . + 0 ID=cds-WP_001220237.1;Parent=gene-C9E93_RS06020;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9E93_RS06020;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 110110 111072 . + . ID=gene-C9E93_RS06025;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9E93_RS06025;old_locus_tag=C9E93_06225 NZ_PYJV01000036.1 Protein Homology CDS 110110 111072 . + 0 ID=cds-WP_047605835.1;Parent=gene-C9E93_RS06025;Dbxref=GenBank:WP_047605835.1;Name=WP_047605835.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9E93_RS06025;product=ferrochelatase;protein_id=WP_047605835.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 111069 112040 . - . ID=gene-C9E93_RS06030;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9E93_RS06030;old_locus_tag=C9E93_06230 NZ_PYJV01000036.1 Protein Homology CDS 111069 112040 . - 0 ID=cds-WP_047605837.1;Parent=gene-C9E93_RS06030;Dbxref=GenBank:WP_047605837.1;Name=WP_047605837.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9E93_RS06030;product=acetyl esterase;protein_id=WP_047605837.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 112193 113497 . + . ID=gene-C9E93_RS06035;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=C9E93_RS06035;old_locus_tag=C9E93_06235 NZ_PYJV01000036.1 Protein Homology CDS 112193 113497 . + 0 ID=cds-WP_000671593.1;Parent=gene-C9E93_RS06035;Dbxref=GenBank:WP_000671593.1;Name=WP_000671593.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9E93_RS06035;product=inosine/guanosine kinase;protein_id=WP_000671593.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 113546 115222 . - . ID=gene-C9E93_RS06040;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=C9E93_RS06040;old_locus_tag=C9E93_06240 NZ_PYJV01000036.1 Protein Homology CDS 113546 115222 . - 0 ID=cds-WP_000546202.1;Parent=gene-C9E93_RS06040;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9E93_RS06040;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 115437 116657 . - . ID=gene-C9E93_RS06045;Name=C9E93_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06045;old_locus_tag=C9E93_06245 NZ_PYJV01000036.1 Protein Homology CDS 115437 116657 . - 0 ID=cds-WP_001251593.1;Parent=gene-C9E93_RS06045;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9E93_RS06045;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 116830 118482 . + . ID=gene-C9E93_RS06050;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9E93_RS06050;old_locus_tag=C9E93_06250 NZ_PYJV01000036.1 Protein Homology CDS 116830 118482 . + 0 ID=cds-WP_000670399.1;Parent=gene-C9E93_RS06050;Dbxref=GenBank:WP_000670399.1;Name=WP_000670399.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9E93_RS06050;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670399.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 118599 119078 . - . ID=gene-C9E93_RS06055;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9E93_RS06055;old_locus_tag=C9E93_06255 NZ_PYJV01000036.1 Protein Homology CDS 118599 119078 . - 0 ID=cds-WP_000186618.1;Parent=gene-C9E93_RS06055;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9E93_RS06055;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 119280 120074 . - . ID=gene-C9E93_RS06060;Name=C9E93_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06060;old_locus_tag=C9E93_06260 NZ_PYJV01000036.1 Protein Homology CDS 119280 120074 . - 0 ID=cds-WP_000421861.1;Parent=gene-C9E93_RS06060;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9E93_RS06060;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_PYJV01000036.1 RefSeq gene 120160 120987 . - . ID=gene-C9E93_RS06065;Name=C9E93_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06065;old_locus_tag=C9E93_06265 NZ_PYJV01000036.1 Protein Homology CDS 120160 120987 . - 0 ID=cds-WP_023243154.1;Parent=gene-C9E93_RS06065;Dbxref=GenBank:WP_023243154.1;Name=WP_023243154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9E93_RS06065;product=lysozyme inhibitor LprI family protein;protein_id=WP_023243154.1;transl_table=11 ##sequence-region NZ_PYJV01000046.1 1 38021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000046.1 RefSeq region 1 38021 . + . ID=NZ_PYJV01000046.1:1..38021;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000046.1 RefSeq gene 153 416 . + . ID=gene-C9E93_RS06930;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9E93_RS06930;old_locus_tag=C9E93_07150 NZ_PYJV01000046.1 Protein Homology CDS 153 416 . + 0 ID=cds-WP_000695693.1;Parent=gene-C9E93_RS06930;Dbxref=GenBank:WP_000695693.1;Name=WP_000695693.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9E93_RS06930;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695693.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 520 786 . + . ID=gene-C9E93_RS06935;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9E93_RS06935;old_locus_tag=C9E93_07155 NZ_PYJV01000046.1 Protein Homology CDS 520 786 . + 0 ID=cds-WP_000853277.1;Parent=gene-C9E93_RS06935;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9E93_RS06935;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 846 1118 . - . ID=gene-C9E93_RS06940;Name=C9E93_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06940;old_locus_tag=C9E93_07160 NZ_PYJV01000046.1 Protein Homology CDS 846 1118 . - 0 ID=cds-WP_001103887.1;Parent=gene-C9E93_RS06940;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9E93_RS06940;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 1290 3257 . - . ID=gene-C9E93_RS06945;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9E93_RS06945;old_locus_tag=C9E93_07165 NZ_PYJV01000046.1 Protein Homology CDS 1290 3257 . - 0 ID=cds-WP_020437906.1;Parent=gene-C9E93_RS06945;Dbxref=GenBank:WP_020437906.1;Name=WP_020437906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9E93_RS06945;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_020437906.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 3263 4195 . - . ID=gene-C9E93_RS06950;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9E93_RS06950;old_locus_tag=C9E93_07170 NZ_PYJV01000046.1 Protein Homology CDS 3263 4195 . - 0 ID=cds-WP_000855134.1;Parent=gene-C9E93_RS06950;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9E93_RS06950;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 4203 4406 . - . ID=gene-C9E93_RS06955;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9E93_RS06955;old_locus_tag=C9E93_07175 NZ_PYJV01000046.1 Protein Homology CDS 4203 4406 . - 0 ID=cds-WP_000051840.1;Parent=gene-C9E93_RS06955;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9E93_RS06955;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 4588 5517 . + . ID=gene-C9E93_RS06960;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9E93_RS06960;old_locus_tag=C9E93_07180 NZ_PYJV01000046.1 Protein Homology CDS 4588 5517 . + 0 ID=cds-WP_000440300.1;Parent=gene-C9E93_RS06960;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9E93_RS06960;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 5640 7085 . - . ID=gene-C9E93_RS06965;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9E93_RS06965;old_locus_tag=C9E93_07185 NZ_PYJV01000046.1 Protein Homology CDS 5640 7085 . - 0 ID=cds-WP_000055936.1;Parent=gene-C9E93_RS06965;Dbxref=GenBank:WP_000055936.1;Name=WP_000055936.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9E93_RS06965;product=metalloprotease TldD;protein_id=WP_000055936.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 7230 11030 . - . ID=gene-C9E93_RS06970;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=C9E93_RS06970;old_locus_tag=C9E93_07190 NZ_PYJV01000046.1 Protein Homology CDS 7230 11030 . - 0 ID=cds-WP_135370352.1;Parent=gene-C9E93_RS06970;Dbxref=GenBank:WP_135370352.1;Name=WP_135370352.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9E93_RS06970;product=AsmA2 domain-containing protein YhdP;protein_id=WP_135370352.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 11137 12606 . - . ID=gene-C9E93_RS06975;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=C9E93_RS06975;old_locus_tag=C9E93_07195 NZ_PYJV01000046.1 Protein Homology CDS 11137 12606 . - 0 ID=cds-WP_000123188.1;Parent=gene-C9E93_RS06975;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9E93_RS06975;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 12596 13189 . - . ID=gene-C9E93_RS06980;Name=C9E93_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06980;old_locus_tag=C9E93_07200 NZ_PYJV01000046.1 Protein Homology CDS 12596 13189 . - 0 ID=cds-WP_000210306.1;Parent=gene-C9E93_RS06980;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9E93_RS06980;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 13198 13686 . - . ID=gene-C9E93_RS06985;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9E93_RS06985;old_locus_tag=C9E93_07205 NZ_PYJV01000046.1 Protein Homology CDS 13198 13686 . - 0 ID=cds-WP_000179403.1;Parent=gene-C9E93_RS06985;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9E93_RS06985;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 13689 14741 . - . ID=gene-C9E93_RS06990;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9E93_RS06990;old_locus_tag=C9E93_07210 NZ_PYJV01000046.1 Protein Homology CDS 13689 14741 . - 0 ID=cds-WP_000802536.1;Parent=gene-C9E93_RS06990;Dbxref=GenBank:WP_000802536.1;Name=WP_000802536.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9E93_RS06990;product=rod shape-determining protein MreC;protein_id=WP_000802536.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 14806 15849 . - . ID=gene-C9E93_RS06995;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=C9E93_RS06995;old_locus_tag=C9E93_07215 NZ_PYJV01000046.1 Protein Homology CDS 14806 15849 . - 0 ID=cds-WP_000913396.1;Parent=gene-C9E93_RS06995;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9E93_RS06995;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 16157 18097 . - . ID=gene-C9E93_RS07005;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9E93_RS07005;old_locus_tag=C9E93_07230 NZ_PYJV01000046.1 Protein Homology CDS 16157 18097 . - 0 ID=cds-WP_001241381.1;Parent=gene-C9E93_RS07005;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9E93_RS07005;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 18301 19275 . + . ID=gene-C9E93_RS07010;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=C9E93_RS07010;old_locus_tag=C9E93_07235 NZ_PYJV01000046.1 Protein Homology CDS 18301 19275 . + 0 ID=cds-WP_001148246.1;Parent=gene-C9E93_RS07010;Dbxref=GenBank:WP_001148246.1;Name=WP_001148246.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9E93_RS07010;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148246.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 19388 20392 . + . ID=gene-C9E93_RS07015;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9E93_RS07015;old_locus_tag=C9E93_07240 NZ_PYJV01000046.1 Protein Homology CDS 19388 20392 . + 0 ID=cds-WP_000723876.1;Parent=gene-C9E93_RS07015;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9E93_RS07015;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 20393 20992 . + . ID=gene-C9E93_RS07020;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9E93_RS07020;old_locus_tag=C9E93_07245 NZ_PYJV01000046.1 Protein Homology CDS 20393 20992 . + 0 ID=cds-WP_001240053.1;Parent=gene-C9E93_RS07020;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9E93_RS07020;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 21385 21855 . + . ID=gene-C9E93_RS07025;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9E93_RS07025;old_locus_tag=C9E93_07250 NZ_PYJV01000046.1 Protein Homology CDS 21385 21855 . + 0 ID=cds-WP_000354626.1;Parent=gene-C9E93_RS07025;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9E93_RS07025;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 21866 23215 . + . ID=gene-C9E93_RS07030;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9E93_RS07030;old_locus_tag=C9E93_07255 NZ_PYJV01000046.1 Protein Homology CDS 21866 23215 . + 0 ID=cds-WP_000884627.1;Parent=gene-C9E93_RS07030;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9E93_RS07030;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 23324 23566 . + . ID=gene-C9E93_RS07035;Name=C9E93_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07035;old_locus_tag=C9E93_07260 NZ_PYJV01000046.1 Protein Homology CDS 23324 23566 . + 0 ID=cds-WP_000340016.1;Parent=gene-C9E93_RS07035;Dbxref=GenBank:WP_000340016.1;Name=WP_000340016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9E93_RS07035;product=YhdT family protein;protein_id=WP_000340016.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 23556 25007 . + . ID=gene-C9E93_RS07040;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9E93_RS07040;old_locus_tag=C9E93_07265 NZ_PYJV01000046.1 Protein Homology CDS 23556 25007 . + 0 ID=cds-WP_050067931.1;Parent=gene-C9E93_RS07040;Dbxref=GenBank:WP_050067931.1;Name=WP_050067931.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9E93_RS07040;product=sodium/pantothenate symporter;protein_id=WP_050067931.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 25019 25900 . + . ID=gene-C9E93_RS07045;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9E93_RS07045;old_locus_tag=C9E93_07270 NZ_PYJV01000046.1 Protein Homology CDS 25019 25900 . + 0 ID=cds-WP_001145849.1;Parent=gene-C9E93_RS07045;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9E93_RS07045;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 26562 27527 . + . ID=gene-C9E93_RS07055;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9E93_RS07055;old_locus_tag=C9E93_07275 NZ_PYJV01000046.1 Protein Homology CDS 26562 27527 . + 0 ID=cds-WP_001219664.1;Parent=gene-C9E93_RS07055;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9E93_RS07055;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 27553 27849 . + . ID=gene-C9E93_RS07060;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9E93_RS07060;old_locus_tag=C9E93_07280 NZ_PYJV01000046.1 Protein Homology CDS 27553 27849 . + 0 ID=cds-WP_000462905.1;Parent=gene-C9E93_RS07060;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9E93_RS07060;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 27935 28819 . + . ID=gene-C9E93_RS07065;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9E93_RS07065;old_locus_tag=C9E93_07285 NZ_PYJV01000046.1 Protein Homology CDS 27935 28819 . + 0 ID=cds-WP_000642611.1;Parent=gene-C9E93_RS07065;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9E93_RS07065;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 28902 29066 . + . ID=gene-C9E93_RS07070;Name=C9E93_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07070;old_locus_tag=C9E93_07290 NZ_PYJV01000046.1 Protein Homology CDS 28902 29066 . + 0 ID=cds-WP_000620015.1;Parent=gene-C9E93_RS07070;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9E93_RS07070;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 29217 31316 . + . ID=gene-C9E93_RS07075;Name=C9E93_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07075;old_locus_tag=C9E93_07295 NZ_PYJV01000046.1 Protein Homology CDS 29217 31316 . + 0 ID=cds-WP_080078167.1;Parent=gene-C9E93_RS07075;Dbxref=GenBank:WP_080078167.1;Name=WP_080078167.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9E93_RS07075;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_080078167.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 31319 31981 . - . ID=gene-C9E93_RS07080;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9E93_RS07080;old_locus_tag=C9E93_07300 NZ_PYJV01000046.1 Protein Homology CDS 31319 31981 . - 0 ID=cds-WP_001085721.1;Parent=gene-C9E93_RS07080;Dbxref=GenBank:WP_001085721.1;Name=WP_001085721.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9E93_RS07080;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085721.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 32395 33552 . + . ID=gene-C9E93_RS07085;Name=C9E93_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07085;old_locus_tag=C9E93_07305 NZ_PYJV01000046.1 Protein Homology CDS 32395 33552 . + 0 ID=cds-WP_000160383.1;Parent=gene-C9E93_RS07085;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9E93_RS07085;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 33564 36677 . + . ID=gene-C9E93_RS07090;Name=C9E93_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07090;old_locus_tag=C9E93_07310 NZ_PYJV01000046.1 Protein Homology CDS 33564 36677 . + 0 ID=cds-WP_001273283.1;Parent=gene-C9E93_RS07090;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9E93_RS07090;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 36914 37135 . + . ID=gene-C9E93_RS07095;Name=C9E93_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS07095;old_locus_tag=C9E93_07315 NZ_PYJV01000046.1 Protein Homology CDS 36914 37135 . + 0 ID=cds-WP_000825645.1;Parent=gene-C9E93_RS07095;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9E93_RS07095;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_PYJV01000046.1 RefSeq gene 37787 38021 . - . ID=gene-C9E93_RS23685;Name=C9E93_RS23685;end_range=38021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23685;partial=true NZ_PYJV01000046.1 GeneMarkS-2+ CDS 37787 38021 . - 1 ID=cds-WP_217810206.1;Parent=gene-C9E93_RS23685;Dbxref=GenBank:WP_217810206.1;Name=WP_217810206.1;end_range=38021,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23685;partial=true;product=hypothetical protein;protein_id=WP_217810206.1;transl_table=11 ##sequence-region NZ_PYJV01000121.1 1 36225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000121.1 RefSeq region 1 36225 . + . ID=NZ_PYJV01000121.1:1..36225;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000121.1 RefSeq gene 281 730 . + . ID=gene-C9E93_RS21755;Name=C9E93_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21755;old_locus_tag=C9E93_22330 NZ_PYJV01000121.1 Protein Homology CDS 281 730 . + 0 ID=cds-WP_001250364.1;Parent=gene-C9E93_RS21755;Dbxref=GenBank:WP_001250364.1;Name=WP_001250364.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9E93_RS21755;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001250364.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 830 1117 . - . ID=gene-C9E93_RS21760;Name=C9E93_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21760;old_locus_tag=C9E93_22335 NZ_PYJV01000121.1 Protein Homology CDS 830 1117 . - 0 ID=cds-WP_135370434.1;Parent=gene-C9E93_RS21760;Dbxref=GenBank:WP_135370434.1;Name=WP_135370434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9E93_RS21760;product=hypothetical protein;protein_id=WP_135370434.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 1156 2001 . - . ID=gene-C9E93_RS21765;Name=C9E93_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21765;old_locus_tag=C9E93_22340 NZ_PYJV01000121.1 Protein Homology CDS 1156 2001 . - 0 ID=cds-WP_000291399.1;Parent=gene-C9E93_RS21765;Dbxref=GenBank:WP_000291399.1;Name=WP_000291399.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9E93_RS21765;product=DsbA family protein;protein_id=WP_000291399.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 2066 2797 . - . ID=gene-C9E93_RS21770;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9E93_RS21770;old_locus_tag=C9E93_22345 NZ_PYJV01000121.1 Protein Homology CDS 2066 2797 . - 0 ID=cds-WP_077910634.1;Parent=gene-C9E93_RS21770;Dbxref=GenBank:WP_077910634.1;Name=WP_077910634.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9E93_RS21770;product=fimbrial chaperone BcfG;protein_id=WP_077910634.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 2763 3281 . - . ID=gene-C9E93_RS21775;Name=C9E93_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21775;old_locus_tag=C9E93_22350 NZ_PYJV01000121.1 Protein Homology CDS 2763 3281 . - 0 ID=cds-WP_064001172.1;Parent=gene-C9E93_RS21775;Dbxref=GenBank:WP_064001172.1;Name=WP_064001172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9E93_RS21775;product=fimbrial protein BcfF;protein_id=WP_064001172.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 3297 3842 . - . ID=gene-C9E93_RS21780;Name=C9E93_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21780;old_locus_tag=C9E93_22355 NZ_PYJV01000121.1 Protein Homology CDS 3297 3842 . - 0 ID=cds-WP_001082039.1;Parent=gene-C9E93_RS21780;Dbxref=GenBank:WP_001082039.1;Name=WP_001082039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9E93_RS21780;product=fimbrial protein BcfE;protein_id=WP_001082039.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 3843 4850 . - . ID=gene-C9E93_RS21785;Name=C9E93_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21785;old_locus_tag=C9E93_22360 NZ_PYJV01000121.1 Protein Homology CDS 3843 4850 . - 0 ID=cds-WP_000701245.1;Parent=gene-C9E93_RS21785;Dbxref=GenBank:WP_000701245.1;Name=WP_000701245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9E93_RS21785;product=fimbrial protein BcfD;protein_id=WP_000701245.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 4851 7472 . - . ID=gene-C9E93_RS21790;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9E93_RS21790;old_locus_tag=C9E93_22365 NZ_PYJV01000121.1 Protein Homology CDS 4851 7472 . - 0 ID=cds-WP_135370435.1;Parent=gene-C9E93_RS21790;Dbxref=GenBank:WP_135370435.1;Name=WP_135370435.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9E93_RS21790;product=fimbrial usher BcfC;protein_id=WP_135370435.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 7477 8163 . - . ID=gene-C9E93_RS21795;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9E93_RS21795;old_locus_tag=C9E93_22370 NZ_PYJV01000121.1 Protein Homology CDS 7477 8163 . - 0 ID=cds-WP_000739906.1;Parent=gene-C9E93_RS21795;Dbxref=GenBank:WP_000739906.1;Name=WP_000739906.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9E93_RS21795;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000739906.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 8264 8806 . - . ID=gene-C9E93_RS21800;Name=C9E93_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21800;old_locus_tag=C9E93_22375 NZ_PYJV01000121.1 Protein Homology CDS 8264 8806 . - 0 ID=cds-WP_000743357.1;Parent=gene-C9E93_RS21800;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9E93_RS21800;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 9236 9940 . - . ID=gene-C9E93_RS21805;Name=C9E93_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21805;old_locus_tag=C9E93_22380 NZ_PYJV01000121.1 Protein Homology CDS 9236 9940 . - 0 ID=cds-WP_000738619.1;Parent=gene-C9E93_RS21805;Dbxref=GenBank:WP_000738619.1;Name=WP_000738619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9E93_RS21805;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738619.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 10221 13217 . - . ID=gene-C9E93_RS21810;Name=C9E93_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21810;old_locus_tag=C9E93_22385 NZ_PYJV01000121.1 Protein Homology CDS 10221 13217 . - 0 ID=cds-WP_135370095.1;Parent=gene-C9E93_RS21810;Dbxref=GenBank:WP_135370095.1;Name=WP_135370095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9E93_RS21810;product=chitinase;protein_id=WP_135370095.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 13310 15415 . - . ID=gene-C9E93_RS21815;Name=C9E93_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21815;old_locus_tag=C9E93_22390 NZ_PYJV01000121.1 Protein Homology CDS 13310 15415 . - 0 ID=cds-WP_135370096.1;Parent=gene-C9E93_RS21815;Dbxref=GenBank:WP_135370096.1;Name=WP_135370096.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9E93_RS21815;product=glycosyl hydrolase family 18 protein;protein_id=WP_135370096.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 15796 16239 . + . ID=gene-C9E93_RS21820;Name=C9E93_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21820;old_locus_tag=C9E93_22395 NZ_PYJV01000121.1 Protein Homology CDS 15796 16239 . + 0 ID=cds-WP_000860681.1;Parent=gene-C9E93_RS21820;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9E93_RS21820;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 16256 16789 . + . ID=gene-C9E93_RS21825;Name=C9E93_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21825;old_locus_tag=C9E93_22400 NZ_PYJV01000121.1 Protein Homology CDS 16256 16789 . + 0 ID=cds-WP_001068132.1;Parent=gene-C9E93_RS21825;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9E93_RS21825;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 16850 17194 . - . ID=gene-C9E93_RS21830;Name=C9E93_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21830;old_locus_tag=C9E93_22405 NZ_PYJV01000121.1 Protein Homology CDS 16850 17194 . - 0 ID=cds-WP_000026889.1;Parent=gene-C9E93_RS21830;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9E93_RS21830;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 17321 18268 . - . ID=gene-C9E93_RS21835;Name=C9E93_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21835;old_locus_tag=C9E93_22410 NZ_PYJV01000121.1 Protein Homology CDS 17321 18268 . - 0 ID=cds-WP_000534911.1;Parent=gene-C9E93_RS21835;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9E93_RS21835;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 18549 19688 . - . ID=gene-C9E93_RS21840;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9E93_RS21840;old_locus_tag=C9E93_22415 NZ_PYJV01000121.1 Protein Homology CDS 18549 19688 . - 0 ID=cds-WP_001119009.1;Parent=gene-C9E93_RS21840;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9E93_RS21840;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 19774 21690 . - . ID=gene-C9E93_RS21845;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9E93_RS21845;old_locus_tag=C9E93_22420 NZ_PYJV01000121.1 Protein Homology CDS 19774 21690 . - 0 ID=cds-WP_000516126.1;Parent=gene-C9E93_RS21845;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9E93_RS21845;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 22038 22442 . + . ID=gene-C9E93_RS21850;Name=C9E93_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21850;old_locus_tag=C9E93_22425 NZ_PYJV01000121.1 Protein Homology CDS 22038 22442 . + 0 ID=cds-WP_001258093.1;Parent=gene-C9E93_RS21850;Dbxref=GenBank:WP_001258093.1;Name=WP_001258093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9E93_RS21850;product=DUF2541 family protein;protein_id=WP_001258093.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 22478 23191 . + . ID=gene-C9E93_RS21855;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9E93_RS21855;old_locus_tag=C9E93_22430 NZ_PYJV01000121.1 Protein Homology CDS 22478 23191 . + 0 ID=cds-WP_001103477.1;Parent=gene-C9E93_RS21855;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9E93_RS21855;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 23341 23907 . + . ID=gene-C9E93_RS21860;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9E93_RS21860;old_locus_tag=C9E93_22435 NZ_PYJV01000121.1 Protein Homology CDS 23341 23907 . + 0 ID=cds-WP_000528525.1;Parent=gene-C9E93_RS21860;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9E93_RS21860;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 23964 24554 . - . ID=gene-C9E93_RS21865;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9E93_RS21865;old_locus_tag=C9E93_22440 NZ_PYJV01000121.1 Protein Homology CDS 23964 24554 . - 0 ID=cds-WP_000380373.1;Parent=gene-C9E93_RS21865;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9E93_RS21865;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 24665 25618 . - . ID=gene-C9E93_RS21870;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E93_RS21870;old_locus_tag=C9E93_22445 NZ_PYJV01000121.1 Protein Homology CDS 24665 25618 . - 0 ID=cds-WP_000130175.1;Parent=gene-C9E93_RS21870;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9E93_RS21870;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 25887 27317 . + . ID=gene-C9E93_RS21875;Name=C9E93_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21875;old_locus_tag=C9E93_22450 NZ_PYJV01000121.1 Protein Homology CDS 25887 27317 . + 0 ID=cds-WP_001113807.1;Parent=gene-C9E93_RS21875;Dbxref=GenBank:WP_001113807.1;Name=WP_001113807.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9E93_RS21875;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113807.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 27396 28169 . + . ID=gene-C9E93_RS21880;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9E93_RS21880;old_locus_tag=C9E93_22455 NZ_PYJV01000121.1 Protein Homology CDS 27396 28169 . + 0 ID=cds-WP_000906175.1;Parent=gene-C9E93_RS21880;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9E93_RS21880;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 28263 29549 . - . ID=gene-C9E93_RS21885;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9E93_RS21885;old_locus_tag=C9E93_22460 NZ_PYJV01000121.1 Protein Homology CDS 28263 29549 . - 0 ID=cds-WP_000781110.1;Parent=gene-C9E93_RS21885;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9E93_RS21885;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 29553 30482 . - . ID=gene-C9E93_RS21890;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9E93_RS21890;old_locus_tag=C9E93_22465 NZ_PYJV01000121.1 Protein Homology CDS 29553 30482 . - 0 ID=cds-WP_000241685.1;Parent=gene-C9E93_RS21890;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9E93_RS21890;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 30484 32946 . - . ID=gene-C9E93_RS21895;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9E93_RS21895;old_locus_tag=C9E93_22470 NZ_PYJV01000121.1 Protein Homology CDS 30484 32946 . - 0 ID=cds-WP_001264677.1;Parent=gene-C9E93_RS21895;Dbxref=GenBank:WP_001264677.1;Name=WP_001264677.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9E93_RS21895;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264677.1;transl_table=11 NZ_PYJV01000121.1 cmsearch sequence_feature 32972 33092 . - . ID=id-NZ_PYJV01000121.1:32972..33092;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000121.1 RefSeq gene 33028 33093 . - . ID=gene-C9E93_RS21900;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9E93_RS21900;old_locus_tag=C9E93_22475 NZ_PYJV01000121.1 Protein Homology CDS 33028 33093 . - 0 ID=cds-WP_001575544.1;Parent=gene-C9E93_RS21900;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9E93_RS21900;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 33307 33993 . - . ID=gene-C9E93_RS21905;Name=C9E93_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21905;old_locus_tag=C9E93_22480 NZ_PYJV01000121.1 Protein Homology CDS 33307 33993 . - 0 ID=cds-WP_001266780.1;Parent=gene-C9E93_RS21905;Dbxref=GenBank:WP_001266780.1;Name=WP_001266780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=C9E93_RS21905;product=tRNA/rRNA methyltransferase;protein_id=WP_001266780.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 34393 34533 . - . ID=gene-C9E93_RS21910;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=C9E93_RS21910;old_locus_tag=C9E93_22485 NZ_PYJV01000121.1 Protein Homology CDS 34393 34533 . - 0 ID=cds-WP_001541509.1;Parent=gene-C9E93_RS21910;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9E93_RS21910;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 34629 35345 . + . ID=gene-C9E93_RS21915;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E93_RS21915;old_locus_tag=C9E93_22490 NZ_PYJV01000121.1 Protein Homology CDS 34629 35345 . + 0 ID=cds-WP_001194359.1;Parent=gene-C9E93_RS21915;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9E93_RS21915;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_PYJV01000121.1 RefSeq gene 35612 35926 . + . ID=gene-C9E93_RS21920;Name=C9E93_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21920;old_locus_tag=C9E93_22495 NZ_PYJV01000121.1 Protein Homology CDS 35612 35926 . + 0 ID=cds-WP_000749515.1;Parent=gene-C9E93_RS21920;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9E93_RS21920;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 ##sequence-region NZ_PYJV01000026.1 1 35492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000026.1 RefSeq region 1 35492 . + . ID=NZ_PYJV01000026.1:1..35492;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000026.1 RefSeq gene 412 654 . + . ID=gene-C9E93_RS03735;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9E93_RS03735;old_locus_tag=C9E93_03875 NZ_PYJV01000026.1 Protein Homology CDS 412 654 . + 0 ID=cds-WP_001541297.1;Parent=gene-C9E93_RS03735;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9E93_RS03735;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 718 1356 . + . ID=gene-C9E93_RS03740;Name=C9E93_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03740;old_locus_tag=C9E93_03880 NZ_PYJV01000026.1 Protein Homology CDS 718 1356 . + 0 ID=cds-WP_000824801.1;Parent=gene-C9E93_RS03740;Dbxref=GenBank:WP_000824801.1;Name=WP_000824801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9E93_RS03740;product=YjbF family lipoprotein;protein_id=WP_000824801.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 1353 2087 . + . ID=gene-C9E93_RS03745;Name=C9E93_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03745;old_locus_tag=C9E93_03885 NZ_PYJV01000026.1 Protein Homology CDS 1353 2087 . + 0 ID=cds-WP_000977960.1;Parent=gene-C9E93_RS03745;Dbxref=GenBank:WP_000977960.1;Name=WP_000977960.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9E93_RS03745;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977960.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 2087 4183 . + . ID=gene-C9E93_RS03750;Name=C9E93_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03750;old_locus_tag=C9E93_03890 NZ_PYJV01000026.1 Protein Homology CDS 2087 4183 . + 0 ID=cds-WP_000750804.1;Parent=gene-C9E93_RS03750;Dbxref=GenBank:WP_000750804.1;Name=WP_000750804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9E93_RS03750;product=YjbH domain-containing protein;protein_id=WP_000750804.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 4326 4736 . + . ID=gene-C9E93_RS03755;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9E93_RS03755;old_locus_tag=C9E93_03895 NZ_PYJV01000026.1 Protein Homology CDS 4326 4736 . + 0 ID=cds-WP_000982749.1;Parent=gene-C9E93_RS03755;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9E93_RS03755;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 4902 5792 . - . ID=gene-C9E93_RS03760;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9E93_RS03760;old_locus_tag=C9E93_03900 NZ_PYJV01000026.1 Protein Homology CDS 4902 5792 . - 0 ID=cds-WP_001252085.1;Parent=gene-C9E93_RS03760;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9E93_RS03760;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 5807 7351 . - . ID=gene-C9E93_RS03765;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9E93_RS03765;old_locus_tag=C9E93_03905 NZ_PYJV01000026.1 Protein Homology CDS 5807 7351 . - 0 ID=cds-WP_000382573.1;Parent=gene-C9E93_RS03765;Dbxref=GenBank:WP_000382573.1;Name=WP_000382573.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9E93_RS03765;product=maltose ABC transporter permease MalF;protein_id=WP_000382573.1;transl_table=11 NZ_PYJV01000026.1 RefSeq pseudogene 7394 7534 . + . ID=gene-C9E93_RS24140;Name=C9E93_RS24140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24140;partial=true;pseudo=true;start_range=.,7394 NZ_PYJV01000026.1 Protein Homology CDS 7394 7534 . + 0 ID=cds-C9E93_RS24140;Parent=gene-C9E93_RS24140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E93_RS24140;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7394;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 7483 8673 . - . ID=gene-C9E93_RS03770;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9E93_RS03770;old_locus_tag=C9E93_03910 NZ_PYJV01000026.1 Protein Homology CDS 7483 8673 . - 0 ID=cds-WP_000695415.1;Parent=gene-C9E93_RS03770;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9E93_RS03770;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 9035 10144 . + . ID=gene-C9E93_RS03775;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=C9E93_RS03775;old_locus_tag=C9E93_03915 NZ_PYJV01000026.1 Protein Homology CDS 9035 10144 . + 0 ID=cds-WP_079903433.1;Parent=gene-C9E93_RS03775;Dbxref=GenBank:WP_079903433.1;Name=WP_079903433.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9E93_RS03775;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_079903433.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 10233 11591 . + . ID=gene-C9E93_RS03780;Name=C9E93_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03780;old_locus_tag=C9E93_03920 NZ_PYJV01000026.1 Protein Homology CDS 10233 11591 . + 0 ID=cds-WP_000973678.1;Parent=gene-C9E93_RS03780;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9E93_RS03780;product=maltoporin;protein_id=WP_000973678.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 11755 12672 . + . ID=gene-C9E93_RS03785;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9E93_RS03785;old_locus_tag=C9E93_03925 NZ_PYJV01000026.1 Protein Homology CDS 11755 12672 . + 0 ID=cds-WP_000782497.1;Parent=gene-C9E93_RS03785;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=C9E93_RS03785;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 12853 13350 . + . ID=gene-C9E93_RS03790;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9E93_RS03790;old_locus_tag=C9E93_03930 NZ_PYJV01000026.1 Protein Homology CDS 12853 13350 . + 0 ID=cds-WP_000019219.1;Parent=gene-C9E93_RS03790;Dbxref=GenBank:WP_000019219.1;Name=WP_000019219.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9E93_RS03790;product=chorismate lyase;protein_id=WP_000019219.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 13364 14236 . + . ID=gene-C9E93_RS03795;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9E93_RS03795;old_locus_tag=C9E93_03935 NZ_PYJV01000026.1 Protein Homology CDS 13364 14236 . + 0 ID=cds-WP_000455249.1;Parent=gene-C9E93_RS03795;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9E93_RS03795;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 14335 16755 . - . ID=gene-C9E93_RS03800;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=C9E93_RS03800;old_locus_tag=C9E93_03940 NZ_PYJV01000026.1 Protein Homology CDS 14335 16755 . - 0 ID=cds-WP_000017360.1;Parent=gene-C9E93_RS03800;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9E93_RS03800;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 16926 17294 . + . ID=gene-C9E93_RS03805;Name=C9E93_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03805;old_locus_tag=C9E93_03945 NZ_PYJV01000026.1 Protein Homology CDS 16926 17294 . + 0 ID=cds-WP_000002900.1;Parent=gene-C9E93_RS03805;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9E93_RS03805;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 17403 18011 . + . ID=gene-C9E93_RS03810;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9E93_RS03810;old_locus_tag=C9E93_03950 NZ_PYJV01000026.1 Protein Homology CDS 17403 18011 . + 0 ID=cds-WP_000646079.1;Parent=gene-C9E93_RS03810;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9E93_RS03810;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 18190 19515 . + . ID=gene-C9E93_RS03815;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9E93_RS03815;old_locus_tag=C9E93_03955 NZ_PYJV01000026.1 Protein Homology CDS 18190 19515 . + 0 ID=cds-WP_001128116.1;Parent=gene-C9E93_RS03815;Dbxref=GenBank:WP_001128116.1;Name=WP_001128116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9E93_RS03815;product=MATE family efflux transporter DinF;protein_id=WP_001128116.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 19512 19625 . + . ID=gene-C9E93_RS03820;Name=C9E93_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03820;old_locus_tag=C9E93_03960 NZ_PYJV01000026.1 Protein Homology CDS 19512 19625 . + 0 ID=cds-WP_001575282.1;Parent=gene-C9E93_RS03820;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9E93_RS03820;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 19647 19856 . + . ID=gene-C9E93_RS03825;Name=C9E93_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03825;old_locus_tag=C9E93_03965 NZ_PYJV01000026.1 Protein Homology CDS 19647 19856 . + 0 ID=cds-WP_001030592.1;Parent=gene-C9E93_RS03825;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9E93_RS03825;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 19956 20471 . - . ID=gene-C9E93_RS03830;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9E93_RS03830;old_locus_tag=C9E93_03970 NZ_PYJV01000026.1 Protein Homology CDS 19956 20471 . - 0 ID=cds-WP_000416271.1;Parent=gene-C9E93_RS03830;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9E93_RS03830;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 20718 22028 . + . ID=gene-C9E93_RS03835;Name=C9E93_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03835;old_locus_tag=C9E93_03975 NZ_PYJV01000026.1 Protein Homology CDS 20718 22028 . + 0 ID=cds-WP_001039335.1;Parent=gene-C9E93_RS03835;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9E93_RS03835;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 22116 23114 . + . ID=gene-C9E93_RS03840;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9E93_RS03840;old_locus_tag=C9E93_03980 NZ_PYJV01000026.1 Protein Homology CDS 22116 23114 . + 0 ID=cds-WP_023250755.1;Parent=gene-C9E93_RS03840;Dbxref=GenBank:WP_023250755.1;Name=WP_023250755.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9E93_RS03840;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_023250755.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 23282 23524 . + . ID=gene-C9E93_RS03845;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9E93_RS03845;old_locus_tag=C9E93_03985 NZ_PYJV01000026.1 Protein Homology CDS 23282 23524 . + 0 ID=cds-WP_000891414.1;Parent=gene-C9E93_RS03845;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9E93_RS03845;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 23699 24682 . - . ID=gene-C9E93_RS03850;Name=C9E93_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03850;old_locus_tag=C9E93_03990 NZ_PYJV01000026.1 Protein Homology CDS 23699 24682 . - 0 ID=cds-WP_000235555.1;Parent=gene-C9E93_RS03850;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9E93_RS03850;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 24747 26162 . + . ID=gene-C9E93_RS03855;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9E93_RS03855;old_locus_tag=C9E93_03995 NZ_PYJV01000026.1 Protein Homology CDS 24747 26162 . + 0 ID=cds-WP_000918353.1;Parent=gene-C9E93_RS03855;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9E93_RS03855;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 26194 27273 . + . ID=gene-C9E93_RS03860;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9E93_RS03860;old_locus_tag=C9E93_04000 NZ_PYJV01000026.1 Protein Homology CDS 26194 27273 . + 0 ID=cds-WP_001147297.1;Parent=gene-C9E93_RS03860;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9E93_RS03860;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 27459 28652 . + . ID=gene-C9E93_RS03865;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9E93_RS03865;old_locus_tag=C9E93_04005 NZ_PYJV01000026.1 Protein Homology CDS 27459 28652 . + 0 ID=cds-WP_024797334.1;Parent=gene-C9E93_RS03865;Dbxref=GenBank:WP_024797334.1;Name=WP_024797334.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9E93_RS03865;product=aromatic amino acid transaminase;protein_id=WP_024797334.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 28839 29552 . + . ID=gene-C9E93_RS03870;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9E93_RS03870;old_locus_tag=C9E93_04015 NZ_PYJV01000026.1 Protein Homology CDS 28839 29552 . + 0 ID=cds-WP_000724435.1;Parent=gene-C9E93_RS03870;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9E93_RS03870;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 29681 30097 . + . ID=gene-C9E93_RS03875;Name=C9E93_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03875;old_locus_tag=C9E93_04020 NZ_PYJV01000026.1 Protein Homology CDS 29681 30097 . + 0 ID=cds-WP_000270393.1;Parent=gene-C9E93_RS03875;Dbxref=GenBank:WP_000270393.1;Name=WP_000270393.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9E93_RS03875;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270393.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 30100 30456 . + . ID=gene-C9E93_RS03880;Name=C9E93_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03880;old_locus_tag=C9E93_04025 NZ_PYJV01000026.1 Protein Homology CDS 30100 30456 . + 0 ID=cds-WP_000155665.1;Parent=gene-C9E93_RS03880;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9E93_RS03880;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 30457 30795 . - . ID=gene-C9E93_RS03885;Name=C9E93_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03885;old_locus_tag=C9E93_04030 NZ_PYJV01000026.1 Protein Homology CDS 30457 30795 . - 0 ID=cds-WP_021001024.1;Parent=gene-C9E93_RS03885;Dbxref=GenBank:WP_021001024.1;Name=WP_021001024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9E93_RS03885;product=hypothetical protein;protein_id=WP_021001024.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 30782 31237 . - . ID=gene-C9E93_RS03890;Name=C9E93_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03890;old_locus_tag=C9E93_04035 NZ_PYJV01000026.1 Protein Homology CDS 30782 31237 . - 0 ID=cds-WP_135370244.1;Parent=gene-C9E93_RS03890;Dbxref=GenBank:WP_135370244.1;Name=WP_135370244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9E93_RS03890;product=hypothetical protein;protein_id=WP_135370244.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 31369 34194 . - . ID=gene-C9E93_RS03895;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9E93_RS03895;old_locus_tag=C9E93_04040 NZ_PYJV01000026.1 Protein Homology CDS 31369 34194 . - 0 ID=cds-WP_000357725.1;Parent=gene-C9E93_RS03895;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9E93_RS03895;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_PYJV01000026.1 RefSeq gene 34442 34972 . + . ID=gene-C9E93_RS03905;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9E93_RS03905;old_locus_tag=C9E93_04050 NZ_PYJV01000026.1 Protein Homology CDS 34442 34972 . + 0 ID=cds-WP_000168322.1;Parent=gene-C9E93_RS03905;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9E93_RS03905;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 ##sequence-region NZ_PYJV01000043.1 1 34950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000043.1 RefSeq region 1 34950 . + . ID=NZ_PYJV01000043.1:1..34950;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000043.1 RefSeq gene 1 2766 . - . ID=gene-C9E93_RS06520;Name=C9E93_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06520;old_locus_tag=C9E93_06730;partial=true;start_range=.,1 NZ_PYJV01000043.1 Protein Homology CDS 1 2766 . - 0 ID=cds-WP_135370320.1;Parent=gene-C9E93_RS06520;Dbxref=GenBank:WP_135370320.1;Name=WP_135370320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9E93_RS06520;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_135370320.1;start_range=.,1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 2785 3231 . - . ID=gene-C9E93_RS06525;Name=C9E93_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06525;old_locus_tag=C9E93_06735 NZ_PYJV01000043.1 Protein Homology CDS 2785 3231 . - 0 ID=cds-WP_000375832.1;Parent=gene-C9E93_RS06525;Dbxref=GenBank:WP_000375832.1;Name=WP_000375832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=C9E93_RS06525;product=DcrB-related protein;protein_id=WP_000375832.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 3255 5444 . - . ID=gene-C9E93_RS06530;Name=C9E93_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06530;old_locus_tag=C9E93_06740 NZ_PYJV01000043.1 Protein Homology CDS 3255 5444 . - 0 ID=cds-WP_079958644.1;Parent=gene-C9E93_RS06530;Dbxref=GenBank:WP_079958644.1;Name=WP_079958644.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=C9E93_RS06530;product=type VI secretion system Vgr family protein;protein_id=WP_079958644.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 5841 6362 . - . ID=gene-C9E93_RS06535;Name=C9E93_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06535;old_locus_tag=C9E93_06750 NZ_PYJV01000043.1 Protein Homology CDS 5841 6362 . - 0 ID=cds-WP_000968384.1;Parent=gene-C9E93_RS06535;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9E93_RS06535;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 6386 6802 . - . ID=gene-C9E93_RS06540;Name=C9E93_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06540;old_locus_tag=C9E93_06755 NZ_PYJV01000043.1 Protein Homology CDS 6386 6802 . - 0 ID=cds-WP_000759645.1;Parent=gene-C9E93_RS06540;Dbxref=GenBank:WP_000759645.1;Name=WP_000759645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9E93_RS06540;product=DUF2195 family protein;protein_id=WP_000759645.1;transl_table=11 NZ_PYJV01000043.1 RefSeq pseudogene 6799 6920 . - . ID=gene-C9E93_RS23680;Name=C9E93_RS23680;end_range=6920,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23680;partial=true;pseudo=true NZ_PYJV01000043.1 Protein Homology CDS 6799 6920 . - 0 ID=cds-C9E93_RS23680;Parent=gene-C9E93_RS23680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=C9E93_RS23680;partial=true;product=TagF domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 6929 7390 . - . ID=gene-C9E93_RS06545;Name=C9E93_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06545;old_locus_tag=C9E93_06760 NZ_PYJV01000043.1 Protein Homology CDS 6929 7390 . - 0 ID=cds-WP_001684272.1;Parent=gene-C9E93_RS06545;Dbxref=GenBank:WP_001684272.1;Name=WP_001684272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9E93_RS06545;product=hypothetical protein;protein_id=WP_001684272.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 7375 7845 . - . ID=gene-C9E93_RS06550;Name=C9E93_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06550;old_locus_tag=C9E93_06765 NZ_PYJV01000043.1 Protein Homology CDS 7375 7845 . - 0 ID=cds-WP_079958645.1;Parent=gene-C9E93_RS06550;Dbxref=GenBank:WP_079958645.1;Name=WP_079958645.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9E93_RS06550;product=glucosaminidase domain-containing protein;protein_id=WP_079958645.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 7888 8655 . - . ID=gene-C9E93_RS06555;Name=C9E93_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06555;old_locus_tag=C9E93_06770 NZ_PYJV01000043.1 Protein Homology CDS 7888 8655 . - 0 ID=cds-WP_001254136.1;Parent=gene-C9E93_RS06555;Dbxref=GenBank:WP_001254136.1;Name=WP_001254136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=C9E93_RS06555;product=TagF domain-containing protein;protein_id=WP_001254136.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 8655 12524 . - . ID=gene-C9E93_RS06560;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9E93_RS06560;old_locus_tag=C9E93_06775 NZ_PYJV01000043.1 Protein Homology CDS 8655 12524 . - 0 ID=cds-WP_079958646.1;Parent=gene-C9E93_RS06560;Dbxref=GenBank:WP_079958646.1;Name=WP_079958646.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9E93_RS06560;product=Type VI secretion protein IcmF;protein_id=WP_079958646.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 12558 12989 . - . ID=gene-C9E93_RS06565;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=C9E93_RS06565;old_locus_tag=C9E93_06780 NZ_PYJV01000043.1 Protein Homology CDS 12558 12989 . - 0 ID=cds-WP_023166851.1;Parent=gene-C9E93_RS06565;Dbxref=GenBank:WP_023166851.1;Name=WP_023166851.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E93_RS06565;product=Shiga-like toxin A subunit SciR;protein_id=WP_023166851.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 13192 13965 . - . ID=gene-C9E93_RS06570;Name=C9E93_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06570;old_locus_tag=C9E93_06790 NZ_PYJV01000043.1 Protein Homology CDS 13192 13965 . - 0 ID=cds-WP_135369978.1;Parent=gene-C9E93_RS06570;Dbxref=GenBank:WP_135369978.1;Name=WP_135369978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9E93_RS06570;product=Rap1a/Tai family immunity protein;protein_id=WP_135369978.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 13970 15274 . - . ID=gene-C9E93_RS06575;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9E93_RS06575;old_locus_tag=C9E93_06795 NZ_PYJV01000043.1 Protein Homology CDS 13970 15274 . - 0 ID=cds-WP_000132483.1;Parent=gene-C9E93_RS06575;Dbxref=GenBank:WP_000132483.1;Name=WP_000132483.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9E93_RS06575;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132483.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 15271 16614 . - . ID=gene-C9E93_RS06580;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9E93_RS06580;old_locus_tag=C9E93_06800 NZ_PYJV01000043.1 Protein Homology CDS 15271 16614 . - 0 ID=cds-WP_000118732.1;Parent=gene-C9E93_RS06580;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9E93_RS06580;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 16618 17154 . - . ID=gene-C9E93_RS06585;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9E93_RS06585;old_locus_tag=C9E93_06805 NZ_PYJV01000043.1 Protein Homology CDS 16618 17154 . - 0 ID=cds-WP_135369977.1;Parent=gene-C9E93_RS06585;Dbxref=GenBank:WP_135369977.1;Name=WP_135369977.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E93_RS06585;product=type VI secretion system lipoprotein TssJ;protein_id=WP_135369977.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 17221 17706 . - . ID=gene-C9E93_RS06590;Name=C9E93_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06590;old_locus_tag=C9E93_06810 NZ_PYJV01000043.1 Protein Homology CDS 17221 17706 . - 0 ID=cds-WP_023251615.1;Parent=gene-C9E93_RS06590;Dbxref=GenBank:WP_023251615.1;Name=WP_023251615.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E93_RS06590;product=Hcp family type VI secretion system effector;protein_id=WP_023251615.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 17849 18232 . - . ID=gene-C9E93_RS06595;Name=C9E93_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06595;old_locus_tag=C9E93_06815 NZ_PYJV01000043.1 Protein Homology CDS 17849 18232 . - 0 ID=cds-WP_000379146.1;Parent=gene-C9E93_RS06595;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9E93_RS06595;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 18217 18702 . - . ID=gene-C9E93_RS06600;Name=C9E93_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06600;old_locus_tag=C9E93_06820 NZ_PYJV01000043.1 Protein Homology CDS 18217 18702 . - 0 ID=cds-WP_001081550.1;Parent=gene-C9E93_RS06600;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9E93_RS06600;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_PYJV01000043.1 RefSeq pseudogene 18745 18939 . - . ID=gene-C9E93_RS23865;Name=C9E93_RS23865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23865;partial=true;pseudo=true;start_range=.,18745 NZ_PYJV01000043.1 Protein Homology CDS 18745 18939 . - 0 ID=cds-C9E93_RS23865;Parent=gene-C9E93_RS23865;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E93_RS23865;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,18745;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 19006 19491 . - . ID=gene-C9E93_RS06605;Name=C9E93_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06605;old_locus_tag=C9E93_06825 NZ_PYJV01000043.1 Protein Homology CDS 19006 19491 . - 0 ID=cds-WP_000312802.1;Parent=gene-C9E93_RS06605;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E93_RS06605;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 19745 20191 . - . ID=gene-C9E93_RS06610;Name=C9E93_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06610;old_locus_tag=C9E93_06830 NZ_PYJV01000043.1 Protein Homology CDS 19745 20191 . - 0 ID=cds-WP_001651541.1;Parent=gene-C9E93_RS06610;Dbxref=GenBank:WP_001651541.1;Name=WP_001651541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=C9E93_RS06610;product=STY0301 family protein;protein_id=WP_001651541.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 20204 20386 . - . ID=gene-C9E93_RS06615;Name=C9E93_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06615;old_locus_tag=C9E93_06835 NZ_PYJV01000043.1 Protein Homology CDS 20204 20386 . - 0 ID=cds-WP_023236948.1;Parent=gene-C9E93_RS06615;Dbxref=GenBank:WP_023236948.1;Name=WP_023236948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033857.1;locus_tag=C9E93_RS06615;product=BPSL0067 family protein;protein_id=WP_023236948.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 20379 21887 . - . ID=gene-C9E93_RS06620;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9E93_RS06620;old_locus_tag=C9E93_06840 NZ_PYJV01000043.1 Protein Homology CDS 20379 21887 . - 0 ID=cds-WP_000013884.1;Parent=gene-C9E93_RS06620;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9E93_RS06620;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 21911 22453 . - . ID=gene-C9E93_RS06625;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9E93_RS06625;old_locus_tag=C9E93_06845 NZ_PYJV01000043.1 Protein Homology CDS 21911 22453 . - 0 ID=cds-WP_000996815.1;Parent=gene-C9E93_RS06625;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9E93_RS06625;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 22553 25192 . - . ID=gene-C9E93_RS06630;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=C9E93_RS06630;old_locus_tag=C9E93_06850 NZ_PYJV01000043.1 Protein Homology CDS 22553 25192 . - 0 ID=cds-WP_135370188.1;Parent=gene-C9E93_RS06630;Dbxref=GenBank:WP_135370188.1;Name=WP_135370188.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9E93_RS06630;product=type VI secretion system ATPase TssH;protein_id=WP_135370188.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 25560 26462 . + . ID=gene-C9E93_RS06635;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9E93_RS06635;old_locus_tag=C9E93_06855 NZ_PYJV01000043.1 Protein Homology CDS 25560 26462 . + 0 ID=cds-WP_001524811.1;Parent=gene-C9E93_RS06635;Dbxref=GenBank:WP_001524811.1;Name=WP_001524811.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9E93_RS06635;product=type VI secretion system-associated protein TagK;protein_id=WP_001524811.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 26449 27273 . + . ID=gene-C9E93_RS06640;Name=C9E93_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06640;old_locus_tag=C9E93_06860 NZ_PYJV01000043.1 Protein Homology CDS 26449 27273 . + 0 ID=cds-WP_135370513.1;Parent=gene-C9E93_RS06640;Dbxref=GenBank:WP_135370513.1;Name=WP_135370513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9E93_RS06640;product=type VI secretion system accessory protein TagJ;protein_id=WP_135370513.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 27270 27764 . + . ID=gene-C9E93_RS06645;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9E93_RS06645;old_locus_tag=C9E93_06865 NZ_PYJV01000043.1 Protein Homology CDS 27270 27764 . + 0 ID=cds-WP_000108007.1;Parent=gene-C9E93_RS06645;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9E93_RS06645;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 27780 29663 . + . ID=gene-C9E93_RS06650;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=C9E93_RS06650;old_locus_tag=C9E93_06870 NZ_PYJV01000043.1 Protein Homology CDS 27780 29663 . + 0 ID=cds-WP_000371506.1;Parent=gene-C9E93_RS06650;Dbxref=GenBank:WP_000371506.1;Name=WP_000371506.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9E93_RS06650;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371506.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 29660 30655 . + . ID=gene-C9E93_RS06655;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=C9E93_RS06655;old_locus_tag=C9E93_06875 NZ_PYJV01000043.1 Protein Homology CDS 29660 30655 . + 0 ID=cds-WP_079984679.1;Parent=gene-C9E93_RS06655;Dbxref=GenBank:WP_079984679.1;Name=WP_079984679.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=C9E93_RS06655;product=type VI secretion system baseplate subunit TssG;protein_id=WP_079984679.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 30666 31721 . + . ID=gene-C9E93_RS06660;Name=C9E93_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06660;old_locus_tag=C9E93_06880 NZ_PYJV01000043.1 Protein Homology CDS 30666 31721 . + 0 ID=cds-WP_000367619.1;Parent=gene-C9E93_RS06660;Dbxref=GenBank:WP_000367619.1;Name=WP_000367619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9E93_RS06660;product=ImpA family type VI secretion system protein;protein_id=WP_000367619.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 32045 32121 . - . ID=gene-C9E93_RS06665;Name=C9E93_RS06665;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS06665;old_locus_tag=C9E93_06885 NZ_PYJV01000043.1 tRNAscan-SE tRNA 32045 32121 . - . ID=rna-C9E93_RS06665;Parent=gene-C9E93_RS06665;anticodon=(pos:complement(32085..32087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS06665;product=tRNA-Asp NZ_PYJV01000043.1 tRNAscan-SE exon 32045 32121 . - . ID=exon-C9E93_RS06665-1;Parent=rna-C9E93_RS06665;anticodon=(pos:complement(32085..32087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS06665;product=tRNA-Asp NZ_PYJV01000043.1 RefSeq gene 32255 32986 . - . ID=gene-C9E93_RS06670;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9E93_RS06670;old_locus_tag=C9E93_06890 NZ_PYJV01000043.1 Protein Homology CDS 32255 32986 . - 0 ID=cds-WP_001670675.1;Parent=gene-C9E93_RS06670;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9E93_RS06670;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 33050 33517 . + . ID=gene-C9E93_RS06675;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9E93_RS06675;old_locus_tag=C9E93_06895 NZ_PYJV01000043.1 Protein Homology CDS 33050 33517 . + 0 ID=cds-WP_000917872.1;Parent=gene-C9E93_RS06675;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9E93_RS06675;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 33514 34236 . - . ID=gene-C9E93_RS06680;Name=C9E93_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06680;old_locus_tag=C9E93_06900 NZ_PYJV01000043.1 Protein Homology CDS 33514 34236 . - 0 ID=cds-WP_000801238.1;Parent=gene-C9E93_RS06680;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9E93_RS06680;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_PYJV01000043.1 RefSeq gene 34271 34950 . + . ID=gene-C9E93_RS06685;Name=gloB;end_range=34950,.;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9E93_RS06685;old_locus_tag=C9E93_06905;partial=true NZ_PYJV01000043.1 Protein Homology CDS 34271 34950 . + 0 ID=cds-WP_135400600.1;Parent=gene-C9E93_RS06685;Dbxref=GenBank:WP_135400600.1;Name=WP_135400600.1;Ontology_term=GO:0019243,GO:0004416;end_range=34950,.;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9E93_RS06685;partial=true;product=hydroxyacylglutathione hydrolase;protein_id=WP_135400600.1;transl_table=11 ##sequence-region NZ_PYJV01000093.1 1 33701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000093.1 RefSeq region 1 33701 . + . ID=NZ_PYJV01000093.1:1..33701;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000093.1 RefSeq gene 127 462 . - . ID=gene-C9E93_RS16715;Name=C9E93_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16715;old_locus_tag=C9E93_17145 NZ_PYJV01000093.1 Protein Homology CDS 127 462 . - 0 ID=cds-WP_000803229.1;Parent=gene-C9E93_RS16715;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9E93_RS16715;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 717 1355 . + . ID=gene-C9E93_RS16720;Name=C9E93_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16720;old_locus_tag=C9E93_17150 NZ_PYJV01000093.1 Protein Homology CDS 717 1355 . + 0 ID=cds-WP_000684804.1;Parent=gene-C9E93_RS16720;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9E93_RS16720;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 1534 2037 . - . ID=gene-C9E93_RS16725;Name=C9E93_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16725;old_locus_tag=C9E93_17155 NZ_PYJV01000093.1 Protein Homology CDS 1534 2037 . - 0 ID=cds-WP_000741707.1;Parent=gene-C9E93_RS16725;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9E93_RS16725;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 2588 3145 . + . ID=gene-C9E93_RS16730;Name=C9E93_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16730;old_locus_tag=C9E93_17160 NZ_PYJV01000093.1 Protein Homology CDS 2588 3145 . + 0 ID=cds-WP_000754798.1;Parent=gene-C9E93_RS16730;Dbxref=GenBank:WP_000754798.1;Name=WP_000754798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9E93_RS16730;product=DJ-1/PfpI family protein;protein_id=WP_000754798.1;transl_table=11 NZ_PYJV01000093.1 RefSeq pseudogene 3257 3437 . + . ID=gene-C9E93_RS16735;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9E93_RS16735;old_locus_tag=C9E93_17165;partial=true;pseudo=true;start_range=.,3257 NZ_PYJV01000093.1 Protein Homology CDS 3257 3437 . + 0 ID=cds-C9E93_RS16735;Parent=gene-C9E93_RS16735;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=C9E93_RS16735;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,3257;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 3660 4463 . + . ID=gene-C9E93_RS16740;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9E93_RS16740;old_locus_tag=C9E93_17170 NZ_PYJV01000093.1 Protein Homology CDS 3660 4463 . + 0 ID=cds-WP_000840114.1;Parent=gene-C9E93_RS16740;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9E93_RS16740;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 4438 5859 . + . ID=gene-C9E93_RS16745;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9E93_RS16745;old_locus_tag=C9E93_17175 NZ_PYJV01000093.1 Protein Homology CDS 4438 5859 . + 0 ID=cds-WP_000089042.1;Parent=gene-C9E93_RS16745;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9E93_RS16745;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 5877 6305 . - . ID=gene-C9E93_RS16750;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9E93_RS16750;old_locus_tag=C9E93_17180 NZ_PYJV01000093.1 Protein Homology CDS 5877 6305 . - 0 ID=cds-WP_000122606.1;Parent=gene-C9E93_RS16750;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9E93_RS16750;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 6302 6418 . - . ID=gene-C9E93_RS16755;Name=C9E93_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16755;old_locus_tag=C9E93_17185 NZ_PYJV01000093.1 Protein Homology CDS 6302 6418 . - 0 ID=cds-WP_001617301.1;Parent=gene-C9E93_RS16755;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9E93_RS16755;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 7101 7442 . + . ID=gene-C9E93_RS16760;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9E93_RS16760;old_locus_tag=C9E93_17190 NZ_PYJV01000093.1 Protein Homology CDS 7101 7442 . + 0 ID=cds-WP_001518146.1;Parent=gene-C9E93_RS16760;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9E93_RS16760;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 7439 8023 . + . ID=gene-C9E93_RS16765;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9E93_RS16765;old_locus_tag=C9E93_17195 NZ_PYJV01000093.1 Protein Homology CDS 7439 8023 . + 0 ID=cds-WP_000605987.1;Parent=gene-C9E93_RS16765;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9E93_RS16765;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 8147 9034 . + . ID=gene-C9E93_RS16770;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9E93_RS16770;old_locus_tag=C9E93_17200 NZ_PYJV01000093.1 Protein Homology CDS 8147 9034 . + 0 ID=cds-WP_000906312.1;Parent=gene-C9E93_RS16770;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9E93_RS16770;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 9031 9960 . + . ID=gene-C9E93_RS16775;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9E93_RS16775;old_locus_tag=C9E93_17205 NZ_PYJV01000093.1 Protein Homology CDS 9031 9960 . + 0 ID=cds-WP_000795653.1;Parent=gene-C9E93_RS16775;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9E93_RS16775;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 9965 11980 . + . ID=gene-C9E93_RS16780;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9E93_RS16780;old_locus_tag=C9E93_17210 NZ_PYJV01000093.1 Protein Homology CDS 9965 11980 . + 0 ID=cds-WP_017441851.1;Parent=gene-C9E93_RS16780;Dbxref=GenBank:WP_017441851.1;Name=WP_017441851.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9E93_RS16780;product=chemotaxis protein CheA;protein_id=WP_017441851.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 12001 12504 . + . ID=gene-C9E93_RS16785;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9E93_RS16785;old_locus_tag=C9E93_17215 NZ_PYJV01000093.1 Protein Homology CDS 12001 12504 . + 0 ID=cds-WP_000147295.1;Parent=gene-C9E93_RS16785;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9E93_RS16785;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 12741 14402 . + . ID=gene-C9E93_RS16790;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9E93_RS16790;old_locus_tag=C9E93_17220 NZ_PYJV01000093.1 Protein Homology CDS 12741 14402 . + 0 ID=cds-WP_000483267.1;Parent=gene-C9E93_RS16790;Dbxref=GenBank:WP_000483267.1;Name=WP_000483267.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9E93_RS16790;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483267.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 14556 15422 . + . ID=gene-C9E93_RS16795;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9E93_RS16795;old_locus_tag=C9E93_17225 NZ_PYJV01000093.1 Protein Homology CDS 14556 15422 . + 0 ID=cds-WP_000204362.1;Parent=gene-C9E93_RS16795;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9E93_RS16795;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 15419 16468 . + . ID=gene-C9E93_RS16800;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9E93_RS16800;old_locus_tag=C9E93_17230 NZ_PYJV01000093.1 Protein Homology CDS 15419 16468 . + 0 ID=cds-WP_000036392.1;Parent=gene-C9E93_RS16800;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9E93_RS16800;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 16486 16875 . + . ID=gene-C9E93_RS16805;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9E93_RS16805;old_locus_tag=C9E93_17235 NZ_PYJV01000093.1 Protein Homology CDS 16486 16875 . + 0 ID=cds-WP_000763861.1;Parent=gene-C9E93_RS16805;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9E93_RS16805;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 16886 17530 . + . ID=gene-C9E93_RS16810;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9E93_RS16810;old_locus_tag=C9E93_17240 NZ_PYJV01000093.1 Protein Homology CDS 16886 17530 . + 0 ID=cds-WP_000983586.1;Parent=gene-C9E93_RS16810;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9E93_RS16810;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 17724 18875 . + . ID=gene-C9E93_RS16815;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9E93_RS16815;old_locus_tag=C9E93_17245 NZ_PYJV01000093.1 Protein Homology CDS 17724 18875 . + 0 ID=cds-WP_135370542.1;Parent=gene-C9E93_RS16815;Dbxref=GenBank:WP_135370542.1;Name=WP_135370542.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9E93_RS16815;product=flagellar biosynthesis protein FlhB;protein_id=WP_135370542.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 18868 20946 . + . ID=gene-C9E93_RS16820;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E93_RS16820;old_locus_tag=C9E93_17250 NZ_PYJV01000093.1 Protein Homology CDS 18868 20946 . + 0 ID=cds-WP_117218672.1;Parent=gene-C9E93_RS16820;Dbxref=GenBank:WP_117218672.1;Name=WP_117218672.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9E93_RS16820;product=flagellar biosynthesis protein FlhA;protein_id=WP_117218672.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 20946 21338 . + . ID=gene-C9E93_RS16825;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=C9E93_RS16825;old_locus_tag=C9E93_17255 NZ_PYJV01000093.1 Protein Homology CDS 20946 21338 . + 0 ID=cds-WP_001233619.1;Parent=gene-C9E93_RS16825;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9E93_RS16825;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 21575 22714 . + . ID=gene-C9E93_RS16830;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=C9E93_RS16830;old_locus_tag=C9E93_17260 NZ_PYJV01000093.1 Protein Homology CDS 21575 22714 . + 0 ID=cds-WP_000989909.1;Parent=gene-C9E93_RS16830;Dbxref=GenBank:WP_000989909.1;Name=WP_000989909.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9E93_RS16830;product=beta-galactosidase BglB;protein_id=WP_000989909.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 22768 24639 . - . ID=gene-C9E93_RS16835;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E93_RS16835;old_locus_tag=C9E93_17265 NZ_PYJV01000093.1 Protein Homology CDS 22768 24639 . - 0 ID=cds-WP_135370541.1;Parent=gene-C9E93_RS16835;Dbxref=GenBank:WP_135370541.1;Name=WP_135370541.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9E93_RS16835;product=penicillin-binding protein 2;protein_id=WP_135370541.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 24828 26561 . - . ID=gene-C9E93_RS16840;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=C9E93_RS16840;old_locus_tag=C9E93_17270 NZ_PYJV01000093.1 Protein Homology CDS 24828 26561 . - 0 ID=cds-WP_001025360.1;Parent=gene-C9E93_RS16840;Dbxref=GenBank:WP_001025360.1;Name=WP_001025360.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9E93_RS16840;product=arginine--tRNA ligase;protein_id=WP_001025360.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 26798 27367 . + . ID=gene-C9E93_RS16845;Name=C9E93_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16845;old_locus_tag=C9E93_17275 NZ_PYJV01000093.1 Protein Homology CDS 26798 27367 . + 0 ID=cds-WP_080151241.1;Parent=gene-C9E93_RS16845;Dbxref=GenBank:WP_080151241.1;Name=WP_080151241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9E93_RS16845;product=VOC family protein;protein_id=WP_080151241.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 27387 28133 . + . ID=gene-C9E93_RS16850;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9E93_RS16850;old_locus_tag=C9E93_17280 NZ_PYJV01000093.1 Protein Homology CDS 27387 28133 . + 0 ID=cds-WP_001185779.1;Parent=gene-C9E93_RS16850;Dbxref=GenBank:WP_001185779.1;Name=WP_001185779.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9E93_RS16850;product=copper homeostasis protein CutC;protein_id=WP_001185779.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 28369 29340 . - . ID=gene-C9E93_RS16855;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9E93_RS16855;old_locus_tag=C9E93_17290 NZ_PYJV01000093.1 Protein Homology CDS 28369 29340 . - 0 ID=cds-WP_001648733.1;Parent=gene-C9E93_RS16855;Dbxref=GenBank:WP_001648733.1;Name=WP_001648733.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9E93_RS16855;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_001648733.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 29337 30080 . - . ID=gene-C9E93_RS16860;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9E93_RS16860;old_locus_tag=C9E93_17295 NZ_PYJV01000093.1 Protein Homology CDS 29337 30080 . - 0 ID=cds-WP_000019609.1;Parent=gene-C9E93_RS16860;Dbxref=GenBank:WP_000019609.1;Name=WP_000019609.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9E93_RS16860;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019609.1;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 30121 30516 . - . ID=gene-C9E93_RS16865;Name=C9E93_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16865;old_locus_tag=C9E93_17300 NZ_PYJV01000093.1 Protein Homology CDS 30121 30516 . - 0 ID=cds-WP_000252975.1;Parent=gene-C9E93_RS16865;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9E93_RS16865;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_PYJV01000093.1 RefSeq pseudogene 30569 30664 . - . ID=gene-C9E93_RS23970;Name=C9E93_RS23970;end_range=30664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23970;partial=true;pseudo=true NZ_PYJV01000093.1 Protein Homology CDS 30569 30664 . - 0 ID=cds-C9E93_RS23970;Parent=gene-C9E93_RS23970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E93_RS23970;partial=true;product=DUF72 domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000093.1 RefSeq pseudogene 30627 32704 . + . ID=gene-C9E93_RS16870;Name=C9E93_RS16870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16870;old_locus_tag=C9E93_17305;pseudo=true NZ_PYJV01000093.1 Protein Homology CDS 30627 32704 . + 0 ID=cds-C9E93_RS16870;Parent=gene-C9E93_RS16870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E93_RS16870;product=phage tail protein;pseudo=true;transl_table=11 NZ_PYJV01000093.1 RefSeq gene 32704 33288 . + . ID=gene-C9E93_RS16875;Name=C9E93_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16875;old_locus_tag=C9E93_17310 NZ_PYJV01000093.1 Protein Homology CDS 32704 33288 . + 0 ID=cds-WP_050067674.1;Parent=gene-C9E93_RS16875;Dbxref=GenBank:WP_050067674.1;Name=WP_050067674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9E93_RS16875;product=tail fiber assembly protein;protein_id=WP_050067674.1;transl_table=11 NZ_PYJV01000093.1 RefSeq pseudogene 33385 33585 . - . ID=gene-C9E93_RS16880;Name=C9E93_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS16880;old_locus_tag=C9E93_17315;pseudo=true NZ_PYJV01000093.1 Protein Homology CDS 33385 33585 . - 0 ID=cds-C9E93_RS16880;Parent=gene-C9E93_RS16880;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9E93_RS16880;product=PagK family vesicle-borne virulence factor;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000088.1 1 33098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000088.1 RefSeq region 1 33098 . + . ID=NZ_PYJV01000088.1:1..33098;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000088.1 RefSeq gene 330 1070 . + . ID=gene-C9E93_RS15575;Name=C9E93_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15575;old_locus_tag=C9E93_15985 NZ_PYJV01000088.1 Protein Homology CDS 330 1070 . + 0 ID=cds-WP_000727892.1;Parent=gene-C9E93_RS15575;Dbxref=GenBank:WP_000727892.1;Name=WP_000727892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9E93_RS15575;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727892.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 1132 1677 . - . ID=gene-C9E93_RS15580;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9E93_RS15580;old_locus_tag=C9E93_15990 NZ_PYJV01000088.1 Protein Homology CDS 1132 1677 . - 0 ID=cds-WP_001271546.1;Parent=gene-C9E93_RS15580;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9E93_RS15580;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 1784 2836 . + . ID=gene-C9E93_RS15585;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9E93_RS15585;old_locus_tag=C9E93_15995 NZ_PYJV01000088.1 Protein Homology CDS 1784 2836 . + 0 ID=cds-WP_000041945.1;Parent=gene-C9E93_RS15585;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9E93_RS15585;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 2929 3897 . + . ID=gene-C9E93_RS15590;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E93_RS15590;old_locus_tag=C9E93_16000 NZ_PYJV01000088.1 Protein Homology CDS 2929 3897 . + 0 ID=cds-WP_000934949.1;Parent=gene-C9E93_RS15590;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9E93_RS15590;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 3916 7242 . + . ID=gene-C9E93_RS15595;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9E93_RS15595;old_locus_tag=C9E93_16005 NZ_PYJV01000088.1 Protein Homology CDS 3916 7242 . + 0 ID=cds-WP_001236755.1;Parent=gene-C9E93_RS15595;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9E93_RS15595;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 7309 7623 . - . ID=gene-C9E93_RS15600;Name=C9E93_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15600;old_locus_tag=C9E93_16010 NZ_PYJV01000088.1 Protein Homology CDS 7309 7623 . - 0 ID=cds-WP_135370638.1;Parent=gene-C9E93_RS15600;Dbxref=GenBank:WP_135370638.1;Name=WP_135370638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=C9E93_RS15600;product=YjeO family protein;protein_id=WP_135370638.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 7675 9177 . - . ID=gene-C9E93_RS15605;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9E93_RS15605;old_locus_tag=C9E93_16015 NZ_PYJV01000088.1 Protein Homology CDS 7675 9177 . - 0 ID=cds-WP_000149876.1;Parent=gene-C9E93_RS15605;Dbxref=GenBank:WP_000149876.1;Name=WP_000149876.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9E93_RS15605;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149876.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 9403 10380 . - . ID=gene-C9E93_RS15610;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9E93_RS15610;old_locus_tag=C9E93_16020 NZ_PYJV01000088.1 Protein Homology CDS 9403 10380 . - 0 ID=cds-WP_000004797.1;Parent=gene-C9E93_RS15610;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9E93_RS15610;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 10703 12493 . + . ID=gene-C9E93_RS15615;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9E93_RS15615;old_locus_tag=C9E93_16025 NZ_PYJV01000088.1 Protein Homology CDS 10703 12493 . + 0 ID=cds-WP_001192954.1;Parent=gene-C9E93_RS15615;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9E93_RS15615;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 12486 13220 . + . ID=gene-C9E93_RS15620;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9E93_RS15620;old_locus_tag=C9E93_16030 NZ_PYJV01000088.1 Protein Homology CDS 12486 13220 . + 0 ID=cds-WP_000829509.1;Parent=gene-C9E93_RS15620;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9E93_RS15620;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 13231 13626 . + . ID=gene-C9E93_RS15625;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9E93_RS15625;old_locus_tag=C9E93_16035 NZ_PYJV01000088.1 Protein Homology CDS 13231 13626 . + 0 ID=cds-WP_000208749.1;Parent=gene-C9E93_RS15625;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9E93_RS15625;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 13637 13996 . + . ID=gene-C9E93_RS15630;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9E93_RS15630;old_locus_tag=C9E93_16040 NZ_PYJV01000088.1 Protein Homology CDS 13637 13996 . + 0 ID=cds-WP_000609650.1;Parent=gene-C9E93_RS15630;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9E93_RS15630;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 14108 14641 . + . ID=gene-C9E93_RS15635;Name=C9E93_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15635;old_locus_tag=C9E93_16045 NZ_PYJV01000088.1 Protein Homology CDS 14108 14641 . + 0 ID=cds-WP_001238398.1;Parent=gene-C9E93_RS15635;Dbxref=GenBank:WP_001238398.1;Name=WP_001238398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9E93_RS15635;product=lipocalin family protein;protein_id=WP_001238398.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 14658 14975 . - . ID=gene-C9E93_RS15640;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9E93_RS15640;old_locus_tag=C9E93_16050 NZ_PYJV01000088.1 Protein Homology CDS 14658 14975 . - 0 ID=cds-WP_000118469.1;Parent=gene-C9E93_RS15640;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9E93_RS15640;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 15231 15818 . + . ID=gene-C9E93_RS15645;Name=C9E93_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15645;old_locus_tag=C9E93_16055 NZ_PYJV01000088.1 Protein Homology CDS 15231 15818 . + 0 ID=cds-WP_000912959.1;Parent=gene-C9E93_RS15645;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9E93_RS15645;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 15849 15995 . - . ID=gene-C9E93_RS15650;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9E93_RS15650;old_locus_tag=C9E93_16060 NZ_PYJV01000088.1 Protein Homology CDS 15849 15995 . - 0 ID=cds-WP_000239598.1;Parent=gene-C9E93_RS15650;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9E93_RS15650;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 16103 16237 . - . ID=gene-C9E93_RS15660;Name=C9E93_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15660;old_locus_tag=C9E93_16070 NZ_PYJV01000088.1 Protein Homology CDS 16103 16237 . - 0 ID=cds-WP_000977687.1;Parent=gene-C9E93_RS15660;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9E93_RS15660;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 16298 16864 . - . ID=gene-C9E93_RS15665;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9E93_RS15665;old_locus_tag=C9E93_16075 NZ_PYJV01000088.1 Protein Homology CDS 16298 16864 . - 0 ID=cds-WP_000257282.1;Parent=gene-C9E93_RS15665;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9E93_RS15665;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 16905 17933 . + . ID=gene-C9E93_RS15670;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9E93_RS15670;old_locus_tag=C9E93_16080 NZ_PYJV01000088.1 Protein Homology CDS 16905 17933 . + 0 ID=cds-WP_000940484.1;Parent=gene-C9E93_RS15670;Dbxref=GenBank:WP_000940484.1;Name=WP_000940484.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9E93_RS15670;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940484.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 18215 19072 . + . ID=gene-C9E93_RS15675;Name=C9E93_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15675;old_locus_tag=C9E93_16085 NZ_PYJV01000088.1 Protein Homology CDS 18215 19072 . + 0 ID=cds-WP_135369976.1;Parent=gene-C9E93_RS15675;Dbxref=GenBank:WP_135369976.1;Name=WP_135369976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9E93_RS15675;product=YjeJ family protein;protein_id=WP_135369976.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 19120 19473 . - . ID=gene-C9E93_RS15680;Name=C9E93_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15680;old_locus_tag=C9E93_16090 NZ_PYJV01000088.1 Protein Homology CDS 19120 19473 . - 0 ID=cds-WP_000558210.1;Parent=gene-C9E93_RS15680;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9E93_RS15680;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 19717 21363 . - . ID=gene-C9E93_RS15685;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9E93_RS15685;old_locus_tag=C9E93_16095 NZ_PYJV01000088.1 Protein Homology CDS 19717 21363 . - 0 ID=cds-WP_000729126.1;Parent=gene-C9E93_RS15685;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9E93_RS15685;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 21407 21700 . - . ID=gene-C9E93_RS15690;Name=C9E93_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15690;old_locus_tag=C9E93_16100 NZ_PYJV01000088.1 Protein Homology CDS 21407 21700 . - 0 ID=cds-WP_000027827.1;Parent=gene-C9E93_RS15690;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9E93_RS15690;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 21976 23217 . + . ID=gene-C9E93_RS15695;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9E93_RS15695;old_locus_tag=C9E93_16105 NZ_PYJV01000088.1 Protein Homology CDS 21976 23217 . + 0 ID=cds-WP_023136358.1;Parent=gene-C9E93_RS15695;Dbxref=GenBank:WP_023136358.1;Name=WP_023136358.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9E93_RS15695;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023136358.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 23276 23752 . - . ID=gene-C9E93_RS15700;Name=C9E93_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15700;old_locus_tag=C9E93_16110 NZ_PYJV01000088.1 Protein Homology CDS 23276 23752 . - 0 ID=cds-WP_001267291.1;Parent=gene-C9E93_RS15700;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9E93_RS15700;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 24093 25529 . + . ID=gene-C9E93_RS15705;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9E93_RS15705;old_locus_tag=C9E93_16115 NZ_PYJV01000088.1 Protein Homology CDS 24093 25529 . + 0 ID=cds-WP_000069440.1;Parent=gene-C9E93_RS15705;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9E93_RS15705;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 25644 26945 . + . ID=gene-C9E93_RS15710;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9E93_RS15710;old_locus_tag=C9E93_16120 NZ_PYJV01000088.1 Protein Homology CDS 25644 26945 . + 0 ID=cds-WP_000637595.1;Parent=gene-C9E93_RS15710;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9E93_RS15710;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 27066 27413 . + . ID=gene-C9E93_RS15715;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9E93_RS15715;old_locus_tag=C9E93_16125 NZ_PYJV01000088.1 Protein Homology CDS 27066 27413 . + 0 ID=cds-WP_000887832.1;Parent=gene-C9E93_RS15715;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9E93_RS15715;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 27389 29092 . + . ID=gene-C9E93_RS15720;Name=C9E93_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15720;old_locus_tag=C9E93_16130 NZ_PYJV01000088.1 Protein Homology CDS 27389 29092 . + 0 ID=cds-WP_135369975.1;Parent=gene-C9E93_RS15720;Dbxref=GenBank:WP_135369975.1;Name=WP_135369975.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9E93_RS15720;product=protein-disulfide reductase DsbD;protein_id=WP_135369975.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 29129 29704 . + . ID=gene-C9E93_RS15725;Name=C9E93_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15725;old_locus_tag=C9E93_16135 NZ_PYJV01000088.1 Protein Homology CDS 29129 29704 . + 0 ID=cds-WP_001188504.1;Parent=gene-C9E93_RS15725;Dbxref=GenBank:WP_001188504.1;Name=WP_001188504.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9E93_RS15725;product=transcriptional regulator;protein_id=WP_001188504.1;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 29820 29895 . + . ID=gene-C9E93_RS15730;Name=C9E93_RS15730;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS15730;old_locus_tag=C9E93_16140 NZ_PYJV01000088.1 tRNAscan-SE tRNA 29820 29895 . + . ID=rna-C9E93_RS15730;Parent=gene-C9E93_RS15730;anticodon=(pos:29853..29855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15730;product=tRNA-Phe NZ_PYJV01000088.1 tRNAscan-SE exon 29820 29895 . + . ID=exon-C9E93_RS15730-1;Parent=rna-C9E93_RS15730;anticodon=(pos:29853..29855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS15730;product=tRNA-Phe NZ_PYJV01000088.1 RefSeq pseudogene 29974 30051 . - . ID=gene-C9E93_RS15735;Name=C9E93_RS15735;end_range=30051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS15735;old_locus_tag=C9E93_16145;partial=true;pseudo=true NZ_PYJV01000088.1 Protein Homology CDS 29974 30051 . - 0 ID=cds-C9E93_RS15735;Parent=gene-C9E93_RS15735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=C9E93_RS15735;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 30605 31357 . + . ID=gene-C9E93_RS15740;Name=C9E93_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15740;old_locus_tag=C9E93_16150 NZ_PYJV01000088.1 Protein Homology CDS 30605 31357 . + 0 ID=cds-WP_135369974.1;Parent=gene-C9E93_RS15740;Dbxref=GenBank:WP_135369974.1;Name=WP_135369974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9E93_RS15740;product=non-specific acid phosphatase;protein_id=WP_135369974.1;transl_table=11 NZ_PYJV01000088.1 RefSeq pseudogene 31500 32545 . + . ID=gene-C9E93_RS15745;Name=C9E93_RS15745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS15745;old_locus_tag=C9E93_16155;pseudo=true NZ_PYJV01000088.1 Protein Homology CDS 31500 32545 . + 0 ID=cds-C9E93_RS15745;Parent=gene-C9E93_RS15745;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E93_RS15745;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_PYJV01000088.1 RefSeq gene 32634 33098 . - . ID=gene-C9E93_RS15750;Name=C9E93_RS15750;end_range=33098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS15750;old_locus_tag=C9E93_16160;partial=true NZ_PYJV01000088.1 Protein Homology CDS 32634 33098 . - 0 ID=cds-WP_135369973.1;Parent=gene-C9E93_RS15750;Dbxref=GenBank:WP_135369973.1;Name=WP_135369973.1;end_range=33098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219494.1;locus_tag=C9E93_RS15750;partial=true;product=DUF1202 family protein;protein_id=WP_135369973.1;transl_table=11 ##sequence-region NZ_PYJV01000056.1 1 32778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000056.1 RefSeq region 1 32778 . + . ID=NZ_PYJV01000056.1:1..32778;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000056.1 RefSeq gene 453 1544 . + . ID=gene-C9E93_RS08590;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9E93_RS08590;old_locus_tag=C9E93_08840 NZ_PYJV01000056.1 Protein Homology CDS 453 1544 . + 0 ID=cds-WP_135370217.1;Parent=gene-C9E93_RS08590;Dbxref=GenBank:WP_135370217.1;Name=WP_135370217.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9E93_RS08590;product=porin OmpF;protein_id=WP_135370217.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 1729 2919 . + . ID=gene-C9E93_RS08595;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9E93_RS08595;old_locus_tag=C9E93_08845 NZ_PYJV01000056.1 Protein Homology CDS 1729 2919 . + 0 ID=cds-WP_061380411.1;Parent=gene-C9E93_RS08595;Dbxref=GenBank:WP_061380411.1;Name=WP_061380411.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9E93_RS08595;product=aspartate transaminase;protein_id=WP_061380411.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 2981 3628 . - . ID=gene-C9E93_RS08600;Name=C9E93_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08600;old_locus_tag=C9E93_08850 NZ_PYJV01000056.1 Protein Homology CDS 2981 3628 . - 0 ID=cds-WP_001109471.1;Parent=gene-C9E93_RS08600;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9E93_RS08600;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 3656 4204 . - . ID=gene-C9E93_RS08605;Name=C9E93_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08605;old_locus_tag=C9E93_08855 NZ_PYJV01000056.1 Protein Homology CDS 3656 4204 . - 0 ID=cds-WP_000357052.1;Parent=gene-C9E93_RS08605;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9E93_RS08605;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 4462 6309 . - . ID=gene-C9E93_RS08610;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9E93_RS08610;old_locus_tag=C9E93_08865 NZ_PYJV01000056.1 Protein Homology CDS 4462 6309 . - 0 ID=cds-WP_000925875.1;Parent=gene-C9E93_RS08610;Dbxref=GenBank:WP_000925875.1;Name=WP_000925875.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9E93_RS08610;product=L%2CD-transpeptidase;protein_id=WP_000925875.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 6654 11120 . - . ID=gene-C9E93_RS08620;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=C9E93_RS08620;old_locus_tag=C9E93_08870 NZ_PYJV01000056.1 Protein Homology CDS 6654 11120 . - 0 ID=cds-WP_023242430.1;Parent=gene-C9E93_RS08620;Dbxref=GenBank:WP_023242430.1;Name=WP_023242430.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9E93_RS08620;product=chromosome partition protein MukB;protein_id=WP_023242430.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 11120 11824 . - . ID=gene-C9E93_RS08625;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9E93_RS08625;old_locus_tag=C9E93_08875 NZ_PYJV01000056.1 Protein Homology CDS 11120 11824 . - 0 ID=cds-WP_000060025.1;Parent=gene-C9E93_RS08625;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9E93_RS08625;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 11805 13127 . - . ID=gene-C9E93_RS08630;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9E93_RS08630;old_locus_tag=C9E93_08880 NZ_PYJV01000056.1 Protein Homology CDS 11805 13127 . - 0 ID=cds-WP_001288828.1;Parent=gene-C9E93_RS08630;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9E93_RS08630;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 13120 13923 . - . ID=gene-C9E93_RS08635;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9E93_RS08635;old_locus_tag=C9E93_08885 NZ_PYJV01000056.1 Protein Homology CDS 13120 13923 . - 0 ID=cds-WP_001154025.1;Parent=gene-C9E93_RS08635;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9E93_RS08635;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 14059 14835 . + . ID=gene-C9E93_RS08640;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9E93_RS08640;old_locus_tag=C9E93_08890 NZ_PYJV01000056.1 Protein Homology CDS 14059 14835 . + 0 ID=cds-WP_135370218.1;Parent=gene-C9E93_RS08640;Dbxref=GenBank:WP_135370218.1;Name=WP_135370218.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9E93_RS08640;product=envelope biogenesis factor ElyC;protein_id=WP_135370218.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 14815 15708 . - . ID=gene-C9E93_RS08645;Name=C9E93_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08645;old_locus_tag=C9E93_08895 NZ_PYJV01000056.1 Protein Homology CDS 14815 15708 . - 0 ID=cds-WP_000436889.1;Parent=gene-C9E93_RS08645;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9E93_RS08645;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 15919 16665 . - . ID=gene-C9E93_RS08655;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9E93_RS08655;old_locus_tag=C9E93_08900 NZ_PYJV01000056.1 Protein Homology CDS 15919 16665 . - 0 ID=cds-WP_000011576.1;Parent=gene-C9E93_RS08655;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9E93_RS08655;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 16662 16844 . - . ID=gene-C9E93_RS08660;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9E93_RS08660;old_locus_tag=C9E93_08905 NZ_PYJV01000056.1 Protein Homology CDS 16662 16844 . - 0 ID=cds-WP_000350061.1;Parent=gene-C9E93_RS08660;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9E93_RS08660;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 16896 18128 . - . ID=gene-C9E93_RS08665;Name=C9E93_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08665;old_locus_tag=C9E93_08910 NZ_PYJV01000056.1 Protein Homology CDS 16896 18128 . - 0 ID=cds-WP_135370219.1;Parent=gene-C9E93_RS08665;Dbxref=GenBank:WP_135370219.1;Name=WP_135370219.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9E93_RS08665;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135370219.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 18172 19149 . - . ID=gene-C9E93_RS08670;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9E93_RS08670;old_locus_tag=C9E93_08915 NZ_PYJV01000056.1 Protein Homology CDS 18172 19149 . - 0 ID=cds-WP_000561679.1;Parent=gene-C9E93_RS08670;Dbxref=GenBank:WP_000561679.1;Name=WP_000561679.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9E93_RS08670;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561679.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 19146 20894 . - . ID=gene-C9E93_RS08675;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9E93_RS08675;old_locus_tag=C9E93_08920 NZ_PYJV01000056.1 Protein Homology CDS 19146 20894 . - 0 ID=cds-WP_000551246.1;Parent=gene-C9E93_RS08675;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9E93_RS08675;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 20931 23195 . - . ID=gene-C9E93_RS08680;Name=C9E93_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08680;old_locus_tag=C9E93_08925 NZ_PYJV01000056.1 Protein Homology CDS 20931 23195 . - 0 ID=cds-WP_135370220.1;Parent=gene-C9E93_RS08680;Dbxref=GenBank:WP_135370220.1;Name=WP_135370220.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9E93_RS08680;product=ComEC family protein;protein_id=WP_135370220.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 23425 23709 . - . ID=gene-C9E93_RS08685;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9E93_RS08685;old_locus_tag=C9E93_08930 NZ_PYJV01000056.1 Protein Homology CDS 23425 23709 . - 0 ID=cds-WP_000167332.1;Parent=gene-C9E93_RS08685;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9E93_RS08685;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 23865 25538 . - . ID=gene-C9E93_RS08690;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9E93_RS08690;old_locus_tag=C9E93_08935 NZ_PYJV01000056.1 Protein Homology CDS 23865 25538 . - 0 ID=cds-WP_000140324.1;Parent=gene-C9E93_RS08690;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9E93_RS08690;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 25652 26335 . - . ID=gene-C9E93_RS08695;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9E93_RS08695;old_locus_tag=C9E93_08940 NZ_PYJV01000056.1 Protein Homology CDS 25652 26335 . - 0 ID=cds-WP_000125007.1;Parent=gene-C9E93_RS08695;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9E93_RS08695;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 26508 27269 . - . ID=gene-C9E93_RS08700;Name=C9E93_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08700;old_locus_tag=C9E93_08945 NZ_PYJV01000056.1 Protein Homology CDS 26508 27269 . - 0 ID=cds-WP_000792301.1;Parent=gene-C9E93_RS08700;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9E93_RS08700;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 27412 28695 . - . ID=gene-C9E93_RS08705;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9E93_RS08705;old_locus_tag=C9E93_08950 NZ_PYJV01000056.1 Protein Homology CDS 27412 28695 . - 0 ID=cds-WP_061380416.1;Parent=gene-C9E93_RS08705;Dbxref=GenBank:WP_061380416.1;Name=WP_061380416.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9E93_RS08705;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_061380416.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 28766 29854 . - . ID=gene-C9E93_RS08710;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9E93_RS08710;old_locus_tag=C9E93_08955 NZ_PYJV01000056.1 Protein Homology CDS 28766 29854 . - 0 ID=cds-WP_000079590.1;Parent=gene-C9E93_RS08710;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9E93_RS08710;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 30040 30732 . - . ID=gene-C9E93_RS08715;Name=C9E93_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08715;old_locus_tag=C9E93_08960 NZ_PYJV01000056.1 Protein Homology CDS 30040 30732 . - 0 ID=cds-WP_000642866.1;Parent=gene-C9E93_RS08715;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9E93_RS08715;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11 NZ_PYJV01000056.1 RefSeq gene 30869 32629 . + . ID=gene-C9E93_RS08720;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=C9E93_RS08720;old_locus_tag=C9E93_08965 NZ_PYJV01000056.1 Protein Homology CDS 30869 32629 . + 0 ID=cds-WP_135370333.1;Parent=gene-C9E93_RS08720;Dbxref=GenBank:WP_135370333.1;Name=WP_135370333.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9E93_RS08720;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_135370333.1;transl_table=11 ##sequence-region NZ_PYJV01000042.1 1 32258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000042.1 RefSeq region 1 32258 . + . ID=NZ_PYJV01000042.1:1..32258;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000042.1 RefSeq gene 376 1965 . + . ID=gene-C9E93_RS06370;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9E93_RS06370;old_locus_tag=C9E93_06575 NZ_PYJV01000042.1 Protein Homology CDS 376 1965 . + 0 ID=cds-WP_135370296.1;Parent=gene-C9E93_RS06370;Dbxref=GenBank:WP_135370296.1;Name=WP_135370296.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9E93_RS06370;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_135370296.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 1977 3266 . + . ID=gene-C9E93_RS06375;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9E93_RS06375;old_locus_tag=C9E93_06580 NZ_PYJV01000042.1 Protein Homology CDS 1977 3266 . + 0 ID=cds-WP_135370297.1;Parent=gene-C9E93_RS06375;Dbxref=GenBank:WP_135370297.1;Name=WP_135370297.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9E93_RS06375;product=phosphoribosylamine--glycine ligase;protein_id=WP_135370297.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 3263 4588 . - . ID=gene-C9E93_RS06380;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=C9E93_RS06380;old_locus_tag=C9E93_06585 NZ_PYJV01000042.1 Protein Homology CDS 3263 4588 . - 0 ID=cds-WP_135370298.1;Parent=gene-C9E93_RS06380;Dbxref=GenBank:WP_135370298.1;Name=WP_135370298.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9E93_RS06380;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_135370298.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 4594 5991 . - . ID=gene-C9E93_RS06385;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9E93_RS06385;old_locus_tag=C9E93_06590 NZ_PYJV01000042.1 Protein Homology CDS 4594 5991 . - 0 ID=cds-WP_064044125.1;Parent=gene-C9E93_RS06385;Dbxref=GenBank:WP_064044125.1;Name=WP_064044125.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9E93_RS06385;product=two-component system sensor histidine kinase ZraS;protein_id=WP_064044125.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 6245 6700 . + . ID=gene-C9E93_RS06390;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9E93_RS06390;old_locus_tag=C9E93_06595 NZ_PYJV01000042.1 Protein Homology CDS 6245 6700 . + 0 ID=cds-WP_000828129.1;Parent=gene-C9E93_RS06390;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9E93_RS06390;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 6742 7434 . - . ID=gene-C9E93_RS06395;Name=C9E93_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06395;old_locus_tag=C9E93_06600 NZ_PYJV01000042.1 Protein Homology CDS 6742 7434 . - 0 ID=cds-WP_001083931.1;Parent=gene-C9E93_RS06395;Dbxref=GenBank:WP_001083931.1;Name=WP_001083931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9E93_RS06395;product=DUF1481 domain-containing protein;protein_id=WP_001083931.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 7446 7718 . - . ID=gene-C9E93_RS06400;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9E93_RS06400;old_locus_tag=C9E93_06605 NZ_PYJV01000042.1 Protein Homology CDS 7446 7718 . - 0 ID=cds-WP_001044509.1;Parent=gene-C9E93_RS06400;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9E93_RS06400;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 7905 8495 . - . ID=gene-C9E93_RS06405;Name=C9E93_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06405;old_locus_tag=C9E93_06610 NZ_PYJV01000042.1 Protein Homology CDS 7905 8495 . - 0 ID=cds-WP_000940092.1;Parent=gene-C9E93_RS06405;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9E93_RS06405;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 8537 9208 . - . ID=gene-C9E93_RS06410;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9E93_RS06410;old_locus_tag=C9E93_06615 NZ_PYJV01000042.1 Protein Homology CDS 8537 9208 . - 0 ID=cds-WP_000362359.1;Parent=gene-C9E93_RS06410;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9E93_RS06410;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 9218 10282 . - . ID=gene-C9E93_RS06415;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9E93_RS06415;old_locus_tag=C9E93_06620 NZ_PYJV01000042.1 Protein Homology CDS 9218 10282 . - 0 ID=cds-WP_000137619.1;Parent=gene-C9E93_RS06415;Dbxref=GenBank:WP_000137619.1;Name=WP_000137619.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9E93_RS06415;product=uroporphyrinogen decarboxylase;protein_id=WP_000137619.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 10323 11096 . - . ID=gene-C9E93_RS06420;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9E93_RS06420;old_locus_tag=C9E93_06625 NZ_PYJV01000042.1 Protein Homology CDS 10323 11096 . - 0 ID=cds-WP_000373960.1;Parent=gene-C9E93_RS06420;Dbxref=GenBank:WP_000373960.1;Name=WP_000373960.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9E93_RS06420;product=NAD(+) diphosphatase;protein_id=WP_000373960.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 11189 11677 . + . ID=gene-C9E93_RS06425;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9E93_RS06425;old_locus_tag=C9E93_06630 NZ_PYJV01000042.1 Protein Homology CDS 11189 11677 . + 0 ID=cds-WP_000934315.1;Parent=gene-C9E93_RS06425;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9E93_RS06425;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 12041 13936 . + . ID=gene-C9E93_RS06430;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9E93_RS06430;old_locus_tag=C9E93_06635 NZ_PYJV01000042.1 Protein Homology CDS 12041 13936 . + 0 ID=cds-WP_135370299.1;Parent=gene-C9E93_RS06430;Dbxref=GenBank:WP_135370299.1;Name=WP_135370299.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=C9E93_RS06430;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_135370299.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 13936 14571 . + . ID=gene-C9E93_RS06435;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9E93_RS06435;old_locus_tag=C9E93_06640 NZ_PYJV01000042.1 Protein Homology CDS 13936 14571 . + 0 ID=cds-WP_135370300.1;Parent=gene-C9E93_RS06435;Dbxref=GenBank:WP_135370300.1;Name=WP_135370300.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9E93_RS06435;product=thiamine phosphate synthase;protein_id=WP_135370300.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 14564 15322 . + . ID=gene-C9E93_RS06440;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=C9E93_RS06440;old_locus_tag=C9E93_06645 NZ_PYJV01000042.1 Protein Homology CDS 14564 15322 . + 0 ID=cds-WP_135370301.1;Parent=gene-C9E93_RS06440;Dbxref=GenBank:WP_135370301.1;Name=WP_135370301.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9E93_RS06440;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_135370301.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 15303 15503 . + . ID=gene-C9E93_RS06445;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9E93_RS06445;old_locus_tag=C9E93_06650 NZ_PYJV01000042.1 Protein Homology CDS 15303 15503 . + 0 ID=cds-WP_020838417.1;Parent=gene-C9E93_RS06445;Dbxref=GenBank:WP_020838417.1;Name=WP_020838417.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9E93_RS06445;product=sulfur carrier protein ThiS;protein_id=WP_020838417.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 15505 16275 . + . ID=gene-C9E93_RS06450;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9E93_RS06450;old_locus_tag=C9E93_06655 NZ_PYJV01000042.1 Protein Homology CDS 15505 16275 . + 0 ID=cds-WP_135370302.1;Parent=gene-C9E93_RS06450;Dbxref=GenBank:WP_135370302.1;Name=WP_135370302.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9E93_RS06450;product=thiazole synthase;protein_id=WP_135370302.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 16272 17405 . + . ID=gene-C9E93_RS06455;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9E93_RS06455;old_locus_tag=C9E93_06660 NZ_PYJV01000042.1 Protein Homology CDS 16272 17405 . + 0 ID=cds-WP_135370303.1;Parent=gene-C9E93_RS06455;Dbxref=GenBank:WP_135370303.1;Name=WP_135370303.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9E93_RS06455;product=2-iminoacetate synthase ThiH;protein_id=WP_135370303.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 17626 18654 . - . ID=gene-C9E93_RS06460;Name=C9E93_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06460;old_locus_tag=C9E93_06665 NZ_PYJV01000042.1 Protein Homology CDS 17626 18654 . - 0 ID=cds-WP_047607392.1;Parent=gene-C9E93_RS06460;Dbxref=GenBank:WP_047607392.1;Name=WP_047607392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=C9E93_RS06460;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_047607392.1;transl_table=11 NZ_PYJV01000042.1 RefSeq pseudogene 19035 19378 . + . ID=gene-C9E93_RS06470;Name=C9E93_RS06470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS06470;old_locus_tag=C9E93_06675;pseudo=true NZ_PYJV01000042.1 Protein Homology CDS 19035 19378 . + 0 ID=cds-C9E93_RS06470;Parent=gene-C9E93_RS06470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9E93_RS06470;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 19380 19706 . - . ID=gene-C9E93_RS06475;Name=C9E93_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06475;old_locus_tag=C9E93_06680 NZ_PYJV01000042.1 Protein Homology CDS 19380 19706 . - 0 ID=cds-WP_080095421.1;Parent=gene-C9E93_RS06475;Dbxref=GenBank:WP_080095421.1;Name=WP_080095421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=C9E93_RS06475;product=hypothetical protein;protein_id=WP_080095421.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 19748 23971 . - . ID=gene-C9E93_RS06480;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9E93_RS06480;old_locus_tag=C9E93_06685 NZ_PYJV01000042.1 Protein Homology CDS 19748 23971 . - 0 ID=cds-WP_000653965.1;Parent=gene-C9E93_RS06480;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9E93_RS06480;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 24048 28076 . - . ID=gene-C9E93_RS06485;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9E93_RS06485;old_locus_tag=C9E93_06690 NZ_PYJV01000042.1 Protein Homology CDS 24048 28076 . - 0 ID=cds-WP_000263105.1;Parent=gene-C9E93_RS06485;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9E93_RS06485;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 28394 28759 . - . ID=gene-C9E93_RS06490;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9E93_RS06490;old_locus_tag=C9E93_06695 NZ_PYJV01000042.1 Protein Homology CDS 28394 28759 . - 0 ID=cds-WP_000028882.1;Parent=gene-C9E93_RS06490;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9E93_RS06490;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 28826 29323 . - . ID=gene-C9E93_RS06495;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9E93_RS06495;old_locus_tag=C9E93_06700 NZ_PYJV01000042.1 Protein Homology CDS 28826 29323 . - 0 ID=cds-WP_001207203.1;Parent=gene-C9E93_RS06495;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9E93_RS06495;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 29743 30447 . - . ID=gene-C9E93_RS06500;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=C9E93_RS06500;old_locus_tag=C9E93_06710 NZ_PYJV01000042.1 Protein Homology CDS 29743 30447 . - 0 ID=cds-WP_001096676.1;Parent=gene-C9E93_RS06500;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9E93_RS06500;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 30451 30879 . - . ID=gene-C9E93_RS06505;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9E93_RS06505;old_locus_tag=C9E93_06715 NZ_PYJV01000042.1 Protein Homology CDS 30451 30879 . - 0 ID=cds-WP_001085926.1;Parent=gene-C9E93_RS06505;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9E93_RS06505;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 31037 31582 . - . ID=gene-C9E93_RS06510;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9E93_RS06510;old_locus_tag=C9E93_06720 NZ_PYJV01000042.1 Protein Homology CDS 31037 31582 . - 0 ID=cds-WP_001287521.1;Parent=gene-C9E93_RS06510;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9E93_RS06510;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_PYJV01000042.1 RefSeq gene 31584 31967 . - . ID=gene-C9E93_RS06515;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9E93_RS06515;old_locus_tag=C9E93_06725 NZ_PYJV01000042.1 Protein Homology CDS 31584 31967 . - 0 ID=cds-WP_001275691.1;Parent=gene-C9E93_RS06515;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9E93_RS06515;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 ##sequence-region NZ_PYJV01000105.1 1 31180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000105.1 RefSeq region 1 31180 . + . ID=NZ_PYJV01000105.1:1..31180;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000105.1 RefSeq gene 152 239 . - . ID=gene-C9E93_RS18485;Name=C9E93_RS18485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS18485;old_locus_tag=C9E93_18970 NZ_PYJV01000105.1 tRNAscan-SE tRNA 152 239 . - . ID=rna-C9E93_RS18485;Parent=gene-C9E93_RS18485;anticodon=(pos:complement(203..205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS18485;product=tRNA-Ser NZ_PYJV01000105.1 tRNAscan-SE exon 152 239 . - . ID=exon-C9E93_RS18485-1;Parent=rna-C9E93_RS18485;anticodon=(pos:complement(203..205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS18485;product=tRNA-Ser NZ_PYJV01000105.1 RefSeq gene 389 1066 . - . ID=gene-C9E93_RS18490;Name=C9E93_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18490;old_locus_tag=C9E93_18975 NZ_PYJV01000105.1 Protein Homology CDS 389 1066 . - 0 ID=cds-WP_000097897.1;Parent=gene-C9E93_RS18490;Dbxref=GenBank:WP_000097897.1;Name=WP_000097897.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9E93_RS18490;product=hydrolase;protein_id=WP_000097897.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 1086 1946 . - . ID=gene-C9E93_RS18495;Name=C9E93_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18495;old_locus_tag=C9E93_18980 NZ_PYJV01000105.1 Protein Homology CDS 1086 1946 . - 0 ID=cds-WP_023237948.1;Parent=gene-C9E93_RS18495;Dbxref=GenBank:WP_023237948.1;Name=WP_023237948.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9E93_RS18495;product=pirin family protein;protein_id=WP_023237948.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 2055 2966 . + . ID=gene-C9E93_RS18500;Name=C9E93_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18500;old_locus_tag=C9E93_18985 NZ_PYJV01000105.1 Protein Homology CDS 2055 2966 . + 0 ID=cds-WP_000597928.1;Parent=gene-C9E93_RS18500;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9E93_RS18500;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 3057 3275 . - . ID=gene-C9E93_RS18505;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9E93_RS18505;old_locus_tag=C9E93_18990 NZ_PYJV01000105.1 Protein Homology CDS 3057 3275 . - 0 ID=cds-WP_001040187.1;Parent=gene-C9E93_RS18505;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9E93_RS18505;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 3587 4291 . - . ID=gene-C9E93_RS18515;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9E93_RS18515;old_locus_tag=C9E93_19000 NZ_PYJV01000105.1 Protein Homology CDS 3587 4291 . - 0 ID=cds-WP_064001065.1;Parent=gene-C9E93_RS18515;Dbxref=GenBank:WP_064001065.1;Name=WP_064001065.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9E93_RS18515;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_064001065.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 4336 6057 . - . ID=gene-C9E93_RS18520;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9E93_RS18520;old_locus_tag=C9E93_19005 NZ_PYJV01000105.1 Protein Homology CDS 4336 6057 . - 0 ID=cds-WP_135370265.1;Parent=gene-C9E93_RS18520;Dbxref=GenBank:WP_135370265.1;Name=WP_135370265.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9E93_RS18520;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_135370265.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 6058 7824 . - . ID=gene-C9E93_RS18525;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9E93_RS18525;old_locus_tag=C9E93_19010 NZ_PYJV01000105.1 Protein Homology CDS 6058 7824 . - 0 ID=cds-WP_001044541.1;Parent=gene-C9E93_RS18525;Dbxref=GenBank:WP_001044541.1;Name=WP_001044541.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9E93_RS18525;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044541.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 7938 8906 . - . ID=gene-C9E93_RS18530;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9E93_RS18530;old_locus_tag=C9E93_19015 NZ_PYJV01000105.1 Protein Homology CDS 7938 8906 . - 0 ID=cds-WP_000537406.1;Parent=gene-C9E93_RS18530;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9E93_RS18530;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 9452 9946 . + . ID=gene-C9E93_RS18535;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9E93_RS18535;old_locus_tag=C9E93_19025 NZ_PYJV01000105.1 Protein Homology CDS 9452 9946 . + 0 ID=cds-WP_000228469.1;Parent=gene-C9E93_RS18535;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9E93_RS18535;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 10081 14064 . + . ID=gene-C9E93_RS18540;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=C9E93_RS18540;old_locus_tag=C9E93_19030 NZ_PYJV01000105.1 Protein Homology CDS 10081 14064 . + 0 ID=cds-WP_135400633.1;Parent=gene-C9E93_RS18540;Dbxref=GenBank:WP_135400633.1;Name=WP_135400633.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9E93_RS18540;product=DNA translocase FtsK;protein_id=WP_135400633.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 14207 14818 . + . ID=gene-C9E93_RS18545;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9E93_RS18545;old_locus_tag=C9E93_19035 NZ_PYJV01000105.1 Protein Homology CDS 14207 14818 . + 0 ID=cds-WP_001519746.1;Parent=gene-C9E93_RS18545;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9E93_RS18545;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 14828 16171 . + . ID=gene-C9E93_RS18550;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9E93_RS18550;old_locus_tag=C9E93_19040 NZ_PYJV01000105.1 Protein Homology CDS 14828 16171 . + 0 ID=cds-WP_135370310.1;Parent=gene-C9E93_RS18550;Dbxref=GenBank:WP_135370310.1;Name=WP_135370310.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9E93_RS18550;product=replication-associated recombination protein RarA;protein_id=WP_135370310.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 16430 17722 . + . ID=gene-C9E93_RS18555;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9E93_RS18555;old_locus_tag=C9E93_19050 NZ_PYJV01000105.1 Protein Homology CDS 16430 17722 . + 0 ID=cds-WP_000886697.1;Parent=gene-C9E93_RS18555;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9E93_RS18555;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 17959 20403 . + . ID=gene-C9E93_RS18560;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9E93_RS18560;old_locus_tag=C9E93_19055 NZ_PYJV01000105.1 Protein Homology CDS 17959 20403 . + 0 ID=cds-WP_000850250.1;Parent=gene-C9E93_RS18560;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9E93_RS18560;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 20414 21031 . + . ID=gene-C9E93_RS18565;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E93_RS18565;old_locus_tag=C9E93_19060 NZ_PYJV01000105.1 Protein Homology CDS 20414 21031 . + 0 ID=cds-WP_000213069.1-2;Parent=gene-C9E93_RS18565;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E93_RS18565;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 21033 21896 . + . ID=gene-C9E93_RS18570;Name=C9E93_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18570;old_locus_tag=C9E93_19065 NZ_PYJV01000105.1 Protein Homology CDS 21033 21896 . + 0 ID=cds-WP_000534681.1;Parent=gene-C9E93_RS18570;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9E93_RS18570;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 22246 23394 . + . ID=gene-C9E93_RS18575;Name=C9E93_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18575;old_locus_tag=C9E93_19070 NZ_PYJV01000105.1 Protein Homology CDS 22246 23394 . + 0 ID=cds-WP_000109278.1;Parent=gene-C9E93_RS18575;Dbxref=GenBank:WP_000109278.1;Name=WP_000109278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9E93_RS18575;product=MFS transporter;protein_id=WP_000109278.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 23612 25033 . + . ID=gene-C9E93_RS18580;Name=C9E93_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18580;old_locus_tag=C9E93_19075 NZ_PYJV01000105.1 Protein Homology CDS 23612 25033 . + 0 ID=cds-WP_001134264.1;Parent=gene-C9E93_RS18580;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9E93_RS18580;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 25326 26123 . - . ID=gene-C9E93_RS18585;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9E93_RS18585;old_locus_tag=C9E93_19080 NZ_PYJV01000105.1 Protein Homology CDS 25326 26123 . - 0 ID=cds-WP_000067928.1;Parent=gene-C9E93_RS18585;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9E93_RS18585;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_PYJV01000105.1 RefSeq pseudogene 26242 26567 . - . ID=gene-C9E93_RS23980;Name=C9E93_RS23980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23980;pseudo=true NZ_PYJV01000105.1 Protein Homology CDS 26242 26567 . - 0 ID=cds-C9E93_RS23980;Parent=gene-C9E93_RS23980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9E93_RS23980;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 26698 27651 . + . ID=gene-C9E93_RS18590;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9E93_RS18590;old_locus_tag=C9E93_19085 NZ_PYJV01000105.1 Protein Homology CDS 26698 27651 . + 0 ID=cds-WP_135370321.1;Parent=gene-C9E93_RS18590;Dbxref=GenBank:WP_135370321.1;Name=WP_135370321.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145575.1;locus_tag=C9E93_RS18590;product=type III secretion system effector SopD2;protein_id=WP_135370321.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 27723 30005 . - . ID=gene-C9E93_RS18595;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E93_RS18595;old_locus_tag=C9E93_19090 NZ_PYJV01000105.1 Protein Homology CDS 27723 30005 . - 0 ID=cds-WP_001292799.1;Parent=gene-C9E93_RS18595;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9E93_RS18595;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_PYJV01000105.1 RefSeq gene 30065 30922 . - . ID=gene-C9E93_RS18600;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9E93_RS18600;old_locus_tag=C9E93_19095 NZ_PYJV01000105.1 Protein Homology CDS 30065 30922 . - 0 ID=cds-WP_000642539.1;Parent=gene-C9E93_RS18600;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9E93_RS18600;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 ##sequence-region NZ_PYJV01000062.1 1 30349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000062.1 RefSeq region 1 30349 . + . ID=NZ_PYJV01000062.1:1..30349;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000062.1 RefSeq gene 109 1104 . + . ID=gene-C9E93_RS09980;Name=C9E93_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09980;old_locus_tag=C9E93_10230 NZ_PYJV01000062.1 Protein Homology CDS 109 1104 . + 0 ID=cds-WP_127173053.1;Parent=gene-C9E93_RS09980;Dbxref=GenBank:WP_127173053.1;Name=WP_127173053.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466218.1;locus_tag=C9E93_RS09980;product=LysR family transcriptional regulator;protein_id=WP_127173053.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 1121 1558 . - . ID=gene-C9E93_RS09985;Name=C9E93_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09985;old_locus_tag=C9E93_10235 NZ_PYJV01000062.1 Protein Homology CDS 1121 1558 . - 0 ID=cds-WP_000158344.1;Parent=gene-C9E93_RS09985;Dbxref=GenBank:WP_000158344.1;Name=WP_000158344.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=C9E93_RS09985;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000158344.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 2081 3799 . + . ID=gene-C9E93_RS09990;Name=C9E93_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09990;old_locus_tag=C9E93_10240 NZ_PYJV01000062.1 Protein Homology CDS 2081 3799 . + 0 ID=cds-WP_135370315.1;Parent=gene-C9E93_RS09990;Dbxref=GenBank:WP_135370315.1;Name=WP_135370315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=C9E93_RS09990;product=aryl-sulfate sulfotransferase;protein_id=WP_135370315.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 3845 5416 . - . ID=gene-C9E93_RS09995;Name=C9E93_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09995;old_locus_tag=C9E93_10245 NZ_PYJV01000062.1 Protein Homology CDS 3845 5416 . - 0 ID=cds-WP_000262866.1;Parent=gene-C9E93_RS09995;Dbxref=GenBank:WP_000262866.1;Name=WP_000262866.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=C9E93_RS09995;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262866.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 5515 6276 . - . ID=gene-C9E93_RS10000;Name=C9E93_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10000;old_locus_tag=C9E93_10250 NZ_PYJV01000062.1 Protein Homology CDS 5515 6276 . - 0 ID=cds-WP_000791534.1;Parent=gene-C9E93_RS10000;Dbxref=GenBank:WP_000791534.1;Name=WP_000791534.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=C9E93_RS10000;product=outer membrane protein OmpK;protein_id=WP_000791534.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 6871 8364 . + . ID=gene-C9E93_RS10005;Name=C9E93_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10005;old_locus_tag=C9E93_10255 NZ_PYJV01000062.1 Protein Homology CDS 6871 8364 . + 0 ID=cds-WP_000831886.1;Parent=gene-C9E93_RS10005;Dbxref=GenBank:WP_000831886.1;Name=WP_000831886.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9E93_RS10005;product=sulfatase family protein;protein_id=WP_000831886.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 8463 9653 . + . ID=gene-C9E93_RS10010;Name=C9E93_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10010;old_locus_tag=C9E93_10260 NZ_PYJV01000062.1 Protein Homology CDS 8463 9653 . + 0 ID=cds-WP_000971148.1;Parent=gene-C9E93_RS10010;Dbxref=GenBank:WP_000971148.1;Name=WP_000971148.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=C9E93_RS10010;product=anaerobic sulfatase maturase;protein_id=WP_000971148.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 9672 10934 . + . ID=gene-C9E93_RS10015;Name=C9E93_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10015;old_locus_tag=C9E93_10265 NZ_PYJV01000062.1 Protein Homology CDS 9672 10934 . + 0 ID=cds-WP_135370124.1;Parent=gene-C9E93_RS10015;Dbxref=GenBank:WP_135370124.1;Name=WP_135370124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055825.1;locus_tag=C9E93_RS10015;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_135370124.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 11052 12767 . + . ID=gene-C9E93_RS10020;Name=C9E93_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10020;old_locus_tag=C9E93_10270 NZ_PYJV01000062.1 Protein Homology CDS 11052 12767 . + 0 ID=cds-WP_135370125.1;Parent=gene-C9E93_RS10020;Dbxref=GenBank:WP_135370125.1;Name=WP_135370125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9E93_RS10020;product=aryl-sulfate sulfotransferase;protein_id=WP_135370125.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 12930 14096 . + . ID=gene-C9E93_RS10025;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9E93_RS10025;old_locus_tag=C9E93_10275 NZ_PYJV01000062.1 Protein Homology CDS 12930 14096 . + 0 ID=cds-WP_048591304.1;Parent=gene-C9E93_RS10025;Dbxref=GenBank:WP_048591304.1;Name=WP_048591304.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9E93_RS10025;product=Na+/H+ antiporter NhaA;protein_id=WP_048591304.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 14158 15057 . + . ID=gene-C9E93_RS10030;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9E93_RS10030;old_locus_tag=C9E93_10280 NZ_PYJV01000062.1 Protein Homology CDS 14158 15057 . + 0 ID=cds-WP_000062872.1;Parent=gene-C9E93_RS10030;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9E93_RS10030;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 15112 17151 . - . ID=gene-C9E93_RS10035;Name=C9E93_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10035;old_locus_tag=C9E93_10285 NZ_PYJV01000062.1 Protein Homology CDS 15112 17151 . - 0 ID=cds-WP_001647565.1;Parent=gene-C9E93_RS10035;Dbxref=GenBank:WP_001647565.1;Name=WP_001647565.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9E93_RS10035;product=glycoside hydrolase family 31 protein;protein_id=WP_001647565.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 17191 18564 . - . ID=gene-C9E93_RS10040;Name=C9E93_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10040;old_locus_tag=C9E93_10290 NZ_PYJV01000062.1 Protein Homology CDS 17191 18564 . - 0 ID=cds-WP_000099989.1;Parent=gene-C9E93_RS10040;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9E93_RS10040;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 19020 19283 . - . ID=gene-C9E93_RS10045;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9E93_RS10045;old_locus_tag=C9E93_10295 NZ_PYJV01000062.1 Protein Homology CDS 19020 19283 . - 0 ID=cds-WP_001518655.1;Parent=gene-C9E93_RS10045;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9E93_RS10045;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 19389 19604 . + . ID=gene-C9E93_RS10050;Name=C9E93_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10050;old_locus_tag=C9E93_10300 NZ_PYJV01000062.1 Protein Homology CDS 19389 19604 . + 0 ID=cds-WP_001726890.1;Parent=gene-C9E93_RS10050;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9E93_RS10050;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 19612 20550 . + . ID=gene-C9E93_RS10055;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9E93_RS10055;old_locus_tag=C9E93_10305 NZ_PYJV01000062.1 Protein Homology CDS 19612 20550 . + 0 ID=cds-WP_000767311.1;Parent=gene-C9E93_RS10055;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9E93_RS10055;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 20595 23429 . + . ID=gene-C9E93_RS10060;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9E93_RS10060;old_locus_tag=C9E93_10310 NZ_PYJV01000062.1 Protein Homology CDS 20595 23429 . + 0 ID=cds-WP_001674865.1;Parent=gene-C9E93_RS10060;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=C9E93_RS10060;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 23429 23929 . + . ID=gene-C9E93_RS10065;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9E93_RS10065;old_locus_tag=C9E93_10315 NZ_PYJV01000062.1 Protein Homology CDS 23429 23929 . + 0 ID=cds-WP_000042739.1;Parent=gene-C9E93_RS10065;Dbxref=GenBank:WP_000042739.1;Name=WP_000042739.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9E93_RS10065;product=signal peptidase II;protein_id=WP_000042739.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 24084 24533 . + . ID=gene-C9E93_RS10070;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9E93_RS10070;old_locus_tag=C9E93_10320 NZ_PYJV01000062.1 Protein Homology CDS 24084 24533 . + 0 ID=cds-WP_000047269.1;Parent=gene-C9E93_RS10070;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9E93_RS10070;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 24536 25486 . + . ID=gene-C9E93_RS10075;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9E93_RS10075;old_locus_tag=C9E93_10325 NZ_PYJV01000062.1 Protein Homology CDS 24536 25486 . + 0 ID=cds-WP_001166428.1;Parent=gene-C9E93_RS10075;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9E93_RS10075;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 25686 26888 . + . ID=gene-C9E93_RS10080;Name=C9E93_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10080;old_locus_tag=C9E93_10330 NZ_PYJV01000062.1 Protein Homology CDS 25686 26888 . + 0 ID=cds-WP_135370126.1;Parent=gene-C9E93_RS10080;Dbxref=GenBank:WP_135370126.1;Name=WP_135370126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9E93_RS10080;product=XAC2610-related protein;protein_id=WP_135370126.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 26904 27824 . + . ID=gene-C9E93_RS10085;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9E93_RS10085;old_locus_tag=C9E93_10335 NZ_PYJV01000062.1 Protein Homology CDS 26904 27824 . + 0 ID=cds-WP_135370127.1;Parent=gene-C9E93_RS10085;Dbxref=GenBank:WP_135370127.1;Name=WP_135370127.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9E93_RS10085;product=ribonucleoside hydrolase RihC;protein_id=WP_135370127.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 27846 28532 . - . ID=gene-C9E93_RS10090;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=C9E93_RS10090;old_locus_tag=C9E93_10340 NZ_PYJV01000062.1 Protein Homology CDS 27846 28532 . - 0 ID=cds-WP_000377406.1;Parent=gene-C9E93_RS10090;Dbxref=GenBank:WP_000377406.1;Name=WP_000377406.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9E93_RS10090;product=citrate response regulator transcription factor CitB;protein_id=WP_000377406.1;transl_table=11 NZ_PYJV01000062.1 RefSeq gene 28534 30153 . - . ID=gene-C9E93_RS10095;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=C9E93_RS10095;old_locus_tag=C9E93_10345 NZ_PYJV01000062.1 Protein Homology CDS 28534 30153 . - 0 ID=cds-WP_023216942.1;Parent=gene-C9E93_RS10095;Dbxref=GenBank:WP_023216942.1;Name=WP_023216942.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9E93_RS10095;product=citrate sensor histidine kinase CitA;protein_id=WP_023216942.1;transl_table=11 ##sequence-region NZ_PYJV01000059.1 1 119784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000059.1 RefSeq region 1 119784 . + . ID=NZ_PYJV01000059.1:1..119784;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000059.1 RefSeq gene 1 5560 . - . ID=gene-C9E93_RS09145;Name=C9E93_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09145;old_locus_tag=C9E93_09390;partial=true;start_range=.,1 NZ_PYJV01000059.1 Protein Homology CDS 1 5560 . - 0 ID=cds-WP_217810208.1;Parent=gene-C9E93_RS09145;Dbxref=GenBank:WP_217810208.1;Name=WP_217810208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747458.1;locus_tag=C9E93_RS09145;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_217810208.1;start_range=.,1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 6169 7626 . - . ID=gene-C9E93_RS09150;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=C9E93_RS09150;old_locus_tag=C9E93_09395 NZ_PYJV01000059.1 Protein Homology CDS 6169 7626 . - 0 ID=cds-WP_000156667.1;Parent=gene-C9E93_RS09150;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9E93_RS09150;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 7633 9162 . - . ID=gene-C9E93_RS09155;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9E93_RS09155;old_locus_tag=C9E93_09400 NZ_PYJV01000059.1 Protein Homology CDS 7633 9162 . - 0 ID=cds-WP_000926431.1;Parent=gene-C9E93_RS09155;Dbxref=GenBank:WP_000926431.1;Name=WP_000926431.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9E93_RS09155;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926431.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 9239 11080 . - . ID=gene-C9E93_RS09160;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9E93_RS09160;old_locus_tag=C9E93_09405 NZ_PYJV01000059.1 Protein Homology CDS 9239 11080 . - 0 ID=cds-WP_001056582.1;Parent=gene-C9E93_RS09160;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9E93_RS09160;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 11077 11379 . - . ID=gene-C9E93_RS09165;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9E93_RS09165;old_locus_tag=C9E93_09410 NZ_PYJV01000059.1 Protein Homology CDS 11077 11379 . - 0 ID=cds-WP_000612687.1;Parent=gene-C9E93_RS09165;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9E93_RS09165;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 11376 11930 . - . ID=gene-C9E93_RS09170;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9E93_RS09170;old_locus_tag=C9E93_09415 NZ_PYJV01000059.1 Protein Homology CDS 11376 11930 . - 0 ID=cds-WP_000393524.1;Parent=gene-C9E93_RS09170;Dbxref=GenBank:WP_000393524.1;Name=WP_000393524.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9E93_RS09170;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393524.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 11941 12483 . - . ID=gene-C9E93_RS09175;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9E93_RS09175;old_locus_tag=C9E93_09420 NZ_PYJV01000059.1 Protein Homology CDS 11941 12483 . - 0 ID=cds-WP_000172747.1;Parent=gene-C9E93_RS09175;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9E93_RS09175;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 12498 13475 . - . ID=gene-C9E93_RS09180;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9E93_RS09180;old_locus_tag=C9E93_09425 NZ_PYJV01000059.1 Protein Homology CDS 12498 13475 . - 0 ID=cds-WP_000118515.1;Parent=gene-C9E93_RS09180;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9E93_RS09180;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 13472 16198 . - . ID=gene-C9E93_RS09185;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=C9E93_RS09185;old_locus_tag=C9E93_09430 NZ_PYJV01000059.1 Protein Homology CDS 13472 16198 . - 0 ID=cds-WP_001518099.1;Parent=gene-C9E93_RS09185;Dbxref=GenBank:WP_001518099.1;Name=WP_001518099.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9E93_RS09185;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001518099.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 16229 17566 . - . ID=gene-C9E93_RS09190;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=C9E93_RS09190;old_locus_tag=C9E93_09435 NZ_PYJV01000059.1 Protein Homology CDS 16229 17566 . - 0 ID=cds-WP_000800048.1;Parent=gene-C9E93_RS09190;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9E93_RS09190;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 17563 18063 . - . ID=gene-C9E93_RS09195;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9E93_RS09195;old_locus_tag=C9E93_09440 NZ_PYJV01000059.1 Protein Homology CDS 17563 18063 . - 0 ID=cds-WP_000545038.1;Parent=gene-C9E93_RS09195;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9E93_RS09195;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 18066 19868 . - . ID=gene-C9E93_RS09200;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9E93_RS09200;old_locus_tag=C9E93_09445 NZ_PYJV01000059.1 Protein Homology CDS 18066 19868 . - 0 ID=cds-WP_000247855.1;Parent=gene-C9E93_RS09200;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9E93_RS09200;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 19955 20617 . - . ID=gene-C9E93_RS09205;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9E93_RS09205;old_locus_tag=C9E93_09450 NZ_PYJV01000059.1 Protein Homology CDS 19955 20617 . - 0 ID=cds-WP_000386728.1;Parent=gene-C9E93_RS09205;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9E93_RS09205;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 20633 21076 . - . ID=gene-C9E93_RS09210;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9E93_RS09210;old_locus_tag=C9E93_09455 NZ_PYJV01000059.1 Protein Homology CDS 20633 21076 . - 0 ID=cds-WP_000062993.1;Parent=gene-C9E93_RS09210;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9E93_RS09210;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 21471 21623 . - . ID=gene-C9E93_RS09215;Name=C9E93_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09215;old_locus_tag=C9E93_09460 NZ_PYJV01000059.1 Protein Homology CDS 21471 21623 . - 0 ID=cds-WP_001598667.1;Parent=gene-C9E93_RS09215;Dbxref=GenBank:WP_001598667.1;Name=WP_001598667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9E93_RS09215;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001598667.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 21703 22641 . - . ID=gene-C9E93_RS09220;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9E93_RS09220;old_locus_tag=C9E93_09465 NZ_PYJV01000059.1 Protein Homology CDS 21703 22641 . - 0 ID=cds-WP_000606288.1;Parent=gene-C9E93_RS09220;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9E93_RS09220;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 23573 24787 . + . ID=gene-C9E93_RS09230;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9E93_RS09230;old_locus_tag=C9E93_09475 NZ_PYJV01000059.1 Protein Homology CDS 23573 24787 . + 0 ID=cds-WP_000074540.1;Parent=gene-C9E93_RS09230;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9E93_RS09230;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 24881 25480 . + . ID=gene-C9E93_RS09235;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9E93_RS09235;old_locus_tag=C9E93_09480 NZ_PYJV01000059.1 Protein Homology CDS 24881 25480 . + 0 ID=cds-WP_000813882.1;Parent=gene-C9E93_RS09235;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9E93_RS09235;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 25586 27412 . - . ID=gene-C9E93_RS09240;Name=C9E93_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09240;old_locus_tag=C9E93_09485 NZ_PYJV01000059.1 Protein Homology CDS 25586 27412 . - 0 ID=cds-WP_001012856.1;Parent=gene-C9E93_RS09240;Dbxref=GenBank:WP_001012856.1;Name=WP_001012856.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9E93_RS09240;product=SLC13 family permease;protein_id=WP_001012856.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 27489 28166 . - . ID=gene-C9E93_RS09245;Name=C9E93_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09245;old_locus_tag=C9E93_09490 NZ_PYJV01000059.1 Protein Homology CDS 27489 28166 . - 0 ID=cds-WP_001555201.1;Parent=gene-C9E93_RS09245;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9E93_RS09245;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 28159 28653 . - . ID=gene-C9E93_RS09250;Name=C9E93_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09250;old_locus_tag=C9E93_09495 NZ_PYJV01000059.1 Protein Homology CDS 28159 28653 . - 0 ID=cds-WP_000426135.1;Parent=gene-C9E93_RS09250;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9E93_RS09250;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 28736 29191 . - . ID=gene-C9E93_RS09255;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9E93_RS09255;old_locus_tag=C9E93_09500 NZ_PYJV01000059.1 Protein Homology CDS 28736 29191 . - 0 ID=cds-WP_000106617.1;Parent=gene-C9E93_RS09255;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9E93_RS09255;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 29531 30733 . + . ID=gene-C9E93_RS09265;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9E93_RS09265;old_locus_tag=C9E93_09505 NZ_PYJV01000059.1 Protein Homology CDS 29531 30733 . + 0 ID=cds-WP_000095692.1;Parent=gene-C9E93_RS09265;Dbxref=GenBank:WP_000095692.1;Name=WP_000095692.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9E93_RS09265;product=acetate kinase;protein_id=WP_000095692.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 30810 32954 . + . ID=gene-C9E93_RS09270;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E93_RS09270;old_locus_tag=C9E93_09510 NZ_PYJV01000059.1 Protein Homology CDS 30810 32954 . + 0 ID=cds-WP_000086692.1;Parent=gene-C9E93_RS09270;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9E93_RS09270;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 33172 34692 . + . ID=gene-C9E93_RS09275;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9E93_RS09275;old_locus_tag=C9E93_09515 NZ_PYJV01000059.1 Protein Homology CDS 33172 34692 . + 0 ID=cds-WP_000117931.1;Parent=gene-C9E93_RS09275;Dbxref=GenBank:WP_000117931.1;Name=WP_000117931.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9E93_RS09275;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117931.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 34741 35694 . - . ID=gene-C9E93_RS09280;Name=C9E93_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09280;old_locus_tag=C9E93_09520 NZ_PYJV01000059.1 Protein Homology CDS 34741 35694 . - 0 ID=cds-WP_000593035.1;Parent=gene-C9E93_RS09280;Dbxref=GenBank:WP_000593035.1;Name=WP_000593035.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9E93_RS09280;product=transketolase family protein;protein_id=WP_000593035.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 35687 36517 . - . ID=gene-C9E93_RS09285;Name=C9E93_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09285;old_locus_tag=C9E93_09525 NZ_PYJV01000059.1 Protein Homology CDS 35687 36517 . - 0 ID=cds-WP_001103267.1;Parent=gene-C9E93_RS09285;Dbxref=GenBank:WP_001103267.1;Name=WP_001103267.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9E93_RS09285;product=transketolase;protein_id=WP_001103267.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 36514 37905 . - . ID=gene-C9E93_RS09290;Name=C9E93_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09290;old_locus_tag=C9E93_09530 NZ_PYJV01000059.1 Protein Homology CDS 36514 37905 . - 0 ID=cds-WP_001522266.1;Parent=gene-C9E93_RS09290;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9E93_RS09290;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 37926 38198 . - . ID=gene-C9E93_RS09295;Name=C9E93_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09295;old_locus_tag=C9E93_09535 NZ_PYJV01000059.1 Protein Homology CDS 37926 38198 . - 0 ID=cds-WP_000699818.1;Parent=gene-C9E93_RS09295;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9E93_RS09295;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 38279 38722 . - . ID=gene-C9E93_RS09300;Name=C9E93_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09300;old_locus_tag=C9E93_09540 NZ_PYJV01000059.1 Protein Homology CDS 38279 38722 . - 0 ID=cds-WP_000901809.1;Parent=gene-C9E93_RS09300;Dbxref=GenBank:WP_000901809.1;Name=WP_000901809.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9E93_RS09300;product=PTS sugar transporter subunit IIA;protein_id=WP_000901809.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 38975 39994 . + . ID=gene-C9E93_RS09310;Name=C9E93_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09310;old_locus_tag=C9E93_09550 NZ_PYJV01000059.1 Protein Homology CDS 38975 39994 . + 0 ID=cds-WP_000026949.1;Parent=gene-C9E93_RS09310;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9E93_RS09310;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 40000 40554 . - . ID=gene-C9E93_RS09315;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9E93_RS09315;old_locus_tag=C9E93_09555 NZ_PYJV01000059.1 Protein Homology CDS 40000 40554 . - 0 ID=cds-WP_000230215.1;Parent=gene-C9E93_RS09315;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9E93_RS09315;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 40611 41162 . - . ID=gene-C9E93_RS09320;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9E93_RS09320;old_locus_tag=C9E93_09560 NZ_PYJV01000059.1 Protein Homology CDS 40611 41162 . - 0 ID=cds-WP_000772458.1;Parent=gene-C9E93_RS09320;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9E93_RS09320;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 41218 41862 . - . ID=gene-C9E93_RS09325;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9E93_RS09325;old_locus_tag=C9E93_09565 NZ_PYJV01000059.1 Protein Homology CDS 41218 41862 . - 0 ID=cds-WP_000043010.1;Parent=gene-C9E93_RS09325;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9E93_RS09325;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 42005 42652 . + . ID=gene-C9E93_RS09330;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=C9E93_RS09330;old_locus_tag=C9E93_09570 NZ_PYJV01000059.1 Protein Homology CDS 42005 42652 . + 0 ID=cds-WP_000566562.1;Parent=gene-C9E93_RS09330;Dbxref=GenBank:WP_000566562.1;Name=WP_000566562.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9E93_RS09330;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566562.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 42778 43671 . + . ID=gene-C9E93_RS09335;Name=C9E93_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09335;old_locus_tag=C9E93_09575 NZ_PYJV01000059.1 Protein Homology CDS 42778 43671 . + 0 ID=cds-WP_001166274.1;Parent=gene-C9E93_RS09335;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9E93_RS09335;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 43723 44496 . - . ID=gene-C9E93_RS09340;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9E93_RS09340;old_locus_tag=C9E93_09580 NZ_PYJV01000059.1 Protein Homology CDS 43723 44496 . - 0 ID=cds-WP_001293591.1;Parent=gene-C9E93_RS09340;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9E93_RS09340;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 44510 45217 . - . ID=gene-C9E93_RS09345;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9E93_RS09345;old_locus_tag=C9E93_09585 NZ_PYJV01000059.1 Protein Homology CDS 44510 45217 . - 0 ID=cds-WP_000569771.1;Parent=gene-C9E93_RS09345;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9E93_RS09345;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 45214 45900 . - . ID=gene-C9E93_RS09350;Name=C9E93_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09350;old_locus_tag=C9E93_09590 NZ_PYJV01000059.1 Protein Homology CDS 45214 45900 . - 0 ID=cds-WP_000965498.1;Parent=gene-C9E93_RS09350;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9E93_RS09350;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 46081 46863 . - . ID=gene-C9E93_RS09355;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9E93_RS09355;old_locus_tag=C9E93_09595 NZ_PYJV01000059.1 Protein Homology CDS 46081 46863 . - 0 ID=cds-WP_000731868.1;Parent=gene-C9E93_RS09355;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9E93_RS09355;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 47101 47883 . - . ID=gene-C9E93_RS09360;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9E93_RS09360;old_locus_tag=C9E93_09600 NZ_PYJV01000059.1 Protein Homology CDS 47101 47883 . - 0 ID=cds-WP_000754423.1;Parent=gene-C9E93_RS09360;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9E93_RS09360;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 48172 48741 . - . ID=gene-C9E93_RS09370;Name=C9E93_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09370;old_locus_tag=C9E93_09610 NZ_PYJV01000059.1 Protein Homology CDS 48172 48741 . - 0 ID=cds-WP_000825682.1;Parent=gene-C9E93_RS09370;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9E93_RS09370;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 48768 50174 . - . ID=gene-C9E93_RS09375;Name=C9E93_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09375;old_locus_tag=C9E93_09615 NZ_PYJV01000059.1 Protein Homology CDS 48768 50174 . - 0 ID=cds-WP_135370504.1;Parent=gene-C9E93_RS09375;Dbxref=GenBank:WP_135370504.1;Name=WP_135370504.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9E93_RS09375;product=amino acid permease;protein_id=WP_135370504.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 50238 51341 . - . ID=gene-C9E93_RS09380;Name=C9E93_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09380;old_locus_tag=C9E93_09620 NZ_PYJV01000059.1 Protein Homology CDS 50238 51341 . - 0 ID=cds-WP_135370503.1;Parent=gene-C9E93_RS09380;Dbxref=GenBank:WP_135370503.1;Name=WP_135370503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9E93_RS09380;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_135370503.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 51343 52764 . - . ID=gene-C9E93_RS09385;Name=C9E93_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09385;old_locus_tag=C9E93_09625 NZ_PYJV01000059.1 Protein Homology CDS 51343 52764 . - 0 ID=cds-WP_000072512.1;Parent=gene-C9E93_RS09385;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9E93_RS09385;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 52855 54252 . - . ID=gene-C9E93_RS09390;Name=C9E93_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09390;old_locus_tag=C9E93_09630 NZ_PYJV01000059.1 Protein Homology CDS 52855 54252 . - 0 ID=cds-WP_000132306.1;Parent=gene-C9E93_RS09390;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9E93_RS09390;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 54463 55890 . + . ID=gene-C9E93_RS09395;Name=C9E93_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09395;old_locus_tag=C9E93_09635 NZ_PYJV01000059.1 Protein Homology CDS 54463 55890 . + 0 ID=cds-WP_000168929.1;Parent=gene-C9E93_RS09395;Dbxref=GenBank:WP_000168929.1;Name=WP_000168929.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9E93_RS09395;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168929.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 55926 57443 . - . ID=gene-C9E93_RS09400;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9E93_RS09400;old_locus_tag=C9E93_09640 NZ_PYJV01000059.1 Protein Homology CDS 55926 57443 . - 0 ID=cds-WP_000334205.1;Parent=gene-C9E93_RS09400;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9E93_RS09400;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 57481 57969 . - . ID=gene-C9E93_RS09405;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9E93_RS09405;old_locus_tag=C9E93_09645 NZ_PYJV01000059.1 Protein Homology CDS 57481 57969 . - 0 ID=cds-WP_000262102.1;Parent=gene-C9E93_RS09405;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9E93_RS09405;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 58280 58954 . - . ID=gene-C9E93_RS09410;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9E93_RS09410;old_locus_tag=C9E93_09650 NZ_PYJV01000059.1 Protein Homology CDS 58280 58954 . - 0 ID=cds-WP_000157035.1;Parent=gene-C9E93_RS09410;Dbxref=GenBank:WP_000157035.1;Name=WP_000157035.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9E93_RS09410;product=cell division protein DedD;protein_id=WP_000157035.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 58944 60212 . - . ID=gene-C9E93_RS09415;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9E93_RS09415;old_locus_tag=C9E93_09655 NZ_PYJV01000059.1 Protein Homology CDS 58944 60212 . - 0 ID=cds-WP_086811610.1;Parent=gene-C9E93_RS09415;Dbxref=GenBank:WP_086811610.1;Name=WP_086811610.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9E93_RS09415;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_086811610.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 60280 61194 . - . ID=gene-C9E93_RS09420;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9E93_RS09420;old_locus_tag=C9E93_09660 NZ_PYJV01000059.1 Protein Homology CDS 60280 61194 . - 0 ID=cds-WP_000118383.1;Parent=gene-C9E93_RS09420;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9E93_RS09420;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 61344 62003 . - . ID=gene-C9E93_RS09425;Name=C9E93_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09425;old_locus_tag=C9E93_09665 NZ_PYJV01000059.1 Protein Homology CDS 61344 62003 . - 0 ID=cds-WP_023205080.1;Parent=gene-C9E93_RS09425;Dbxref=GenBank:WP_023205080.1;Name=WP_023205080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9E93_RS09425;product=DedA family protein;protein_id=WP_023205080.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 62052 62864 . - . ID=gene-C9E93_RS09430;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9E93_RS09430;old_locus_tag=C9E93_09670 NZ_PYJV01000059.1 Protein Homology CDS 62052 62864 . - 0 ID=cds-WP_000016631.1;Parent=gene-C9E93_RS09430;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=C9E93_RS09430;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 62864 63877 . - . ID=gene-C9E93_RS09435;Name=C9E93_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09435;old_locus_tag=C9E93_09675 NZ_PYJV01000059.1 Protein Homology CDS 62864 63877 . - 0 ID=cds-WP_135370502.1;Parent=gene-C9E93_RS09435;Dbxref=GenBank:WP_135370502.1;Name=WP_135370502.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9E93_RS09435;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_135370502.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 63945 65081 . - . ID=gene-C9E93_RS09440;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9E93_RS09440;old_locus_tag=C9E93_09680 NZ_PYJV01000059.1 Protein Homology CDS 63945 65081 . - 0 ID=cds-WP_023203554.1;Parent=gene-C9E93_RS09440;Dbxref=GenBank:WP_023203554.1;Name=WP_023203554.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9E93_RS09440;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_023203554.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 65185 66186 . + . ID=gene-C9E93_RS09445;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9E93_RS09445;old_locus_tag=C9E93_09685 NZ_PYJV01000059.1 Protein Homology CDS 65185 66186 . + 0 ID=cds-WP_000553395.1;Parent=gene-C9E93_RS09445;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9E93_RS09445;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 66183 67361 . - . ID=gene-C9E93_RS09450;Name=C9E93_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09450;old_locus_tag=C9E93_09690 NZ_PYJV01000059.1 Protein Homology CDS 66183 67361 . - 0 ID=cds-WP_001533705.1;Parent=gene-C9E93_RS09450;Dbxref=GenBank:WP_001533705.1;Name=WP_001533705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9E93_RS09450;product=MFS transporter;protein_id=WP_001533705.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 67541 67915 . - . ID=gene-C9E93_RS09455;Name=C9E93_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09455;old_locus_tag=C9E93_09695 NZ_PYJV01000059.1 Protein Homology CDS 67541 67915 . - 0 ID=cds-WP_023138696.1;Parent=gene-C9E93_RS09455;Dbxref=GenBank:WP_023138696.1;Name=WP_023138696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9E93_RS09455;product=hypothetical protein;protein_id=WP_023138696.1;transl_table=11 NZ_PYJV01000059.1 RefSeq pseudogene 68088 68219 . + . ID=gene-C9E93_RS23710;Name=C9E93_RS23710;end_range=68219,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23710;old_locus_tag=C9E93_09700;partial=true;pseudo=true NZ_PYJV01000059.1 Protein Homology CDS 68088 68219 . + 0 ID=cds-C9E93_RS23710;Parent=gene-C9E93_RS23710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=68219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9E93_RS23710;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000059.1 RefSeq pseudogene 68165 68482 . + . ID=gene-C9E93_RS24175;Name=C9E93_RS24175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24175;old_locus_tag=C9E93_09705;partial=true;pseudo=true;start_range=.,68165 NZ_PYJV01000059.1 Protein Homology CDS 68165 68482 . + 0 ID=cds-C9E93_RS24175;Parent=gene-C9E93_RS24175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9E93_RS24175;partial=true;product=hypothetical protein;pseudo=true;start_range=.,68165;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 68482 69000 . + . ID=gene-C9E93_RS09470;Name=C9E93_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09470;old_locus_tag=C9E93_09710 NZ_PYJV01000059.1 Protein Homology CDS 68482 69000 . + 0 ID=cds-WP_000847540.1;Parent=gene-C9E93_RS09470;Dbxref=GenBank:WP_000847540.1;Name=WP_000847540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9E93_RS09470;product=YbjP/YqhG family protein;protein_id=WP_000847540.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 69067 69723 . - . ID=gene-C9E93_RS09475;Name=C9E93_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09475;old_locus_tag=C9E93_09715 NZ_PYJV01000059.1 Protein Homology CDS 69067 69723 . - 0 ID=cds-WP_135370501.1;Parent=gene-C9E93_RS09475;Dbxref=GenBank:WP_135370501.1;Name=WP_135370501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9E93_RS09475;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_135370501.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 69821 71035 . - . ID=gene-C9E93_RS09480;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9E93_RS09480;old_locus_tag=C9E93_09720 NZ_PYJV01000059.1 Protein Homology CDS 69821 71035 . - 0 ID=cds-WP_000817161.1;Parent=gene-C9E93_RS09480;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9E93_RS09480;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 71195 73195 . + . ID=gene-C9E93_RS09485;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9E93_RS09485;old_locus_tag=C9E93_09725 NZ_PYJV01000059.1 Protein Homology CDS 71195 73195 . + 0 ID=cds-WP_167851641.1;Parent=gene-C9E93_RS09485;Dbxref=GenBank:WP_167851641.1;Name=WP_167851641.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=C9E93_RS09485;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_167851641.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 73247 73522 . - . ID=gene-C9E93_RS09490;Name=C9E93_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09490;old_locus_tag=C9E93_09730 NZ_PYJV01000059.1 Protein Homology CDS 73247 73522 . - 0 ID=cds-WP_000559749.1;Parent=gene-C9E93_RS09490;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9E93_RS09490;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 73555 74103 . - . ID=gene-C9E93_RS09495;Name=C9E93_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09495;old_locus_tag=C9E93_09735 NZ_PYJV01000059.1 Protein Homology CDS 73555 74103 . - 0 ID=cds-WP_001089211.1;Parent=gene-C9E93_RS09495;Dbxref=GenBank:WP_001089211.1;Name=WP_001089211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9E93_RS09495;product=elongation factor P hydroxylase;protein_id=WP_001089211.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 74103 74912 . - . ID=gene-C9E93_RS09500;Name=C9E93_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09500;old_locus_tag=C9E93_09740 NZ_PYJV01000059.1 Protein Homology CDS 74103 74912 . - 0 ID=cds-WP_000368599.1;Parent=gene-C9E93_RS09500;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9E93_RS09500;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 74912 75736 . - . ID=gene-C9E93_RS09505;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9E93_RS09505;old_locus_tag=C9E93_09745 NZ_PYJV01000059.1 Protein Homology CDS 74912 75736 . - 0 ID=cds-WP_000750429.1;Parent=gene-C9E93_RS09505;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9E93_RS09505;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 75740 76825 . - . ID=gene-C9E93_RS09510;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9E93_RS09510;old_locus_tag=C9E93_09750 NZ_PYJV01000059.1 Protein Homology CDS 75740 76825 . - 0 ID=cds-WP_000918457.1;Parent=gene-C9E93_RS09510;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9E93_RS09510;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 76861 77793 . - . ID=gene-C9E93_RS09515;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9E93_RS09515;old_locus_tag=C9E93_09755 NZ_PYJV01000059.1 Protein Homology CDS 76861 77793 . - 0 ID=cds-WP_001619154.1;Parent=gene-C9E93_RS09515;Dbxref=GenBank:WP_001619154.1;Name=WP_001619154.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9E93_RS09515;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001619154.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 77959 78510 . + . ID=gene-C9E93_RS09520;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9E93_RS09520;old_locus_tag=C9E93_09760 NZ_PYJV01000059.1 Protein Homology CDS 77959 78510 . + 0 ID=cds-WP_127821155.1;Parent=gene-C9E93_RS09520;Dbxref=GenBank:WP_127821155.1;Name=WP_127821155.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9E93_RS09520;product=endonuclease SmrB;protein_id=WP_127821155.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 78610 79095 . - . ID=gene-C9E93_RS09525;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9E93_RS09525;old_locus_tag=C9E93_09765 NZ_PYJV01000059.1 Protein Homology CDS 78610 79095 . - 0 ID=cds-WP_050067773.1;Parent=gene-C9E93_RS09525;Dbxref=GenBank:WP_050067773.1;Name=WP_050067773.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9E93_RS09525;product=phosphohistidine phosphatase SixA;protein_id=WP_050067773.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 79304 81451 . - . ID=gene-C9E93_RS09530;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9E93_RS09530;old_locus_tag=C9E93_09770 NZ_PYJV01000059.1 Protein Homology CDS 79304 81451 . - 0 ID=cds-WP_135370499.1;Parent=gene-C9E93_RS09530;Dbxref=GenBank:WP_135370499.1;Name=WP_135370499.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9E93_RS09530;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_135370499.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 81451 82761 . - . ID=gene-C9E93_RS09535;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9E93_RS09535;old_locus_tag=C9E93_09775 NZ_PYJV01000059.1 Protein Homology CDS 81451 82761 . - 0 ID=cds-WP_001248126.1;Parent=gene-C9E93_RS09535;Dbxref=GenBank:WP_001248126.1;Name=WP_001248126.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9E93_RS09535;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248126.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 82939 83223 . - . ID=gene-C9E93_RS09540;Name=C9E93_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09540;old_locus_tag=C9E93_09780 NZ_PYJV01000059.1 Protein Homology CDS 82939 83223 . - 0 ID=cds-WP_000030904.1;Parent=gene-C9E93_RS09540;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9E93_RS09540;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 83594 84901 . + . ID=gene-C9E93_RS09545;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9E93_RS09545;old_locus_tag=C9E93_09785 NZ_PYJV01000059.1 Protein Homology CDS 83594 84901 . + 0 ID=cds-WP_001518618.1;Parent=gene-C9E93_RS09545;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9E93_RS09545;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 84962 85717 . - . ID=gene-C9E93_RS09550;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9E93_RS09550;old_locus_tag=C9E93_09790 NZ_PYJV01000059.1 Protein Homology CDS 84962 85717 . - 0 ID=cds-WP_000776787.1;Parent=gene-C9E93_RS09550;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9E93_RS09550;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 86006 86947 . + . ID=gene-C9E93_RS09555;Name=C9E93_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09555;old_locus_tag=C9E93_09795 NZ_PYJV01000059.1 Protein Homology CDS 86006 86947 . + 0 ID=cds-WP_000377769.1;Parent=gene-C9E93_RS09555;Dbxref=GenBank:WP_000377769.1;Name=WP_000377769.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9E93_RS09555;product=formate/nitrite transporter family protein;protein_id=WP_000377769.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 87023 87097 . + . ID=gene-C9E93_RS09560;Name=C9E93_RS09560;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09560;old_locus_tag=C9E93_09800 NZ_PYJV01000059.1 tRNAscan-SE tRNA 87023 87097 . + . ID=rna-C9E93_RS09560;Parent=gene-C9E93_RS09560;anticodon=(pos:87056..87058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09560;product=tRNA-Arg NZ_PYJV01000059.1 tRNAscan-SE exon 87023 87097 . + . ID=exon-C9E93_RS09560-1;Parent=rna-C9E93_RS09560;anticodon=(pos:87056..87058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09560;product=tRNA-Arg NZ_PYJV01000059.1 RefSeq pseudogene 87199 88391 . + . ID=gene-C9E93_RS09565;Name=C9E93_RS09565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS09565;old_locus_tag=C9E93_09805;pseudo=true NZ_PYJV01000059.1 Protein Homology CDS 87199 88391 . + 0 ID=cds-C9E93_RS09565;Parent=gene-C9E93_RS09565;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958707.1;locus_tag=C9E93_RS09565;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 88527 88889 . + . ID=gene-C9E93_RS09570;Name=C9E93_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09570;old_locus_tag=C9E93_09810 NZ_PYJV01000059.1 Protein Homology CDS 88527 88889 . + 0 ID=cds-WP_050067774.1;Parent=gene-C9E93_RS09570;Dbxref=GenBank:WP_050067774.1;Name=WP_050067774.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125606.1;locus_tag=C9E93_RS09570;product=GtrA family protein;protein_id=WP_050067774.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 88886 89803 . + . ID=gene-C9E93_RS09575;Name=C9E93_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09575;old_locus_tag=C9E93_09815 NZ_PYJV01000059.1 Protein Homology CDS 88886 89803 . + 0 ID=cds-WP_058116683.1;Parent=gene-C9E93_RS09575;Dbxref=GenBank:WP_058116683.1;Name=WP_058116683.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995289.1;locus_tag=C9E93_RS09575;product=glycosyltransferase family 2 protein;protein_id=WP_058116683.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 89809 91458 . + . ID=gene-C9E93_RS09580;Name=C9E93_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09580;old_locus_tag=C9E93_09820 NZ_PYJV01000059.1 Protein Homology CDS 89809 91458 . + 0 ID=cds-WP_232472640.1;Parent=gene-C9E93_RS09580;Dbxref=GenBank:WP_232472640.1;Name=WP_232472640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995288.1;locus_tag=C9E93_RS09580;product=DUF6056 family protein;protein_id=WP_232472640.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 91500 91913 . - . ID=gene-C9E93_RS09585;Name=C9E93_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09585 NZ_PYJV01000059.1 GeneMarkS-2+ CDS 91500 91913 . - 0 ID=cds-WP_135370246.1;Parent=gene-C9E93_RS09585;Dbxref=GenBank:WP_135370246.1;Name=WP_135370246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09585;product=hypothetical protein;protein_id=WP_135370246.1;transl_table=11 NZ_PYJV01000059.1 RefSeq pseudogene 92957 93314 . - . ID=gene-C9E93_RS09590;Name=C9E93_RS09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS09590;old_locus_tag=C9E93_09825;partial=true;pseudo=true;start_range=.,92957 NZ_PYJV01000059.1 Protein Homology CDS 92957 93314 . - 0 ID=cds-C9E93_RS09590;Parent=gene-C9E93_RS09590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543868.1;locus_tag=C9E93_RS09590;partial=true;product=phage head-binding domain-containing protein;pseudo=true;start_range=.,92957;transl_table=11 NZ_PYJV01000059.1 RefSeq pseudogene 93471 93815 . - . ID=gene-C9E93_RS09595;Name=C9E93_RS09595;end_range=93815,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS09595;old_locus_tag=C9E93_09830;partial=true;pseudo=true NZ_PYJV01000059.1 Protein Homology CDS 93471 93815 . - 0 ID=cds-C9E93_RS09595;Parent=gene-C9E93_RS09595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93815,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029860.1;locus_tag=C9E93_RS09595;partial=true;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 93984 94922 . - . ID=gene-C9E93_RS09600;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9E93_RS09600;old_locus_tag=C9E93_09835 NZ_PYJV01000059.1 Protein Homology CDS 93984 94922 . - 0 ID=cds-WP_000716009.1;Parent=gene-C9E93_RS09600;Dbxref=GenBank:WP_000716009.1;Name=WP_000716009.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9E93_RS09600;product=omptin family outer membrane protease PgtE;protein_id=WP_000716009.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 95190 96437 . - . ID=gene-C9E93_RS09605;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9E93_RS09605;old_locus_tag=C9E93_09840 NZ_PYJV01000059.1 Protein Homology CDS 95190 96437 . - 0 ID=cds-WP_000930843.1;Parent=gene-C9E93_RS09605;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9E93_RS09605;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 96427 98433 . - . ID=gene-C9E93_RS09610;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9E93_RS09610;old_locus_tag=C9E93_09845 NZ_PYJV01000059.1 Protein Homology CDS 96427 98433 . - 0 ID=cds-WP_000678493.1;Parent=gene-C9E93_RS09610;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9E93_RS09610;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 98430 99623 . - . ID=gene-C9E93_RS09615;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9E93_RS09615;old_locus_tag=C9E93_09850 NZ_PYJV01000059.1 Protein Homology CDS 98430 99623 . - 0 ID=cds-WP_000467981.1;Parent=gene-C9E93_RS09615;Dbxref=GenBank:WP_000467981.1;Name=WP_000467981.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9E93_RS09615;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467981.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 100059 101450 . + . ID=gene-C9E93_RS09625;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9E93_RS09625;old_locus_tag=C9E93_09860 NZ_PYJV01000059.1 Protein Homology CDS 100059 101450 . + 0 ID=cds-WP_000955739.1;Parent=gene-C9E93_RS09625;Dbxref=GenBank:WP_000955739.1;Name=WP_000955739.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9E93_RS09625;product=phosphoglycerate transporter PgtP;protein_id=WP_000955739.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 101689 101931 . - . ID=gene-C9E93_RS09630;Name=C9E93_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09630;old_locus_tag=C9E93_09865 NZ_PYJV01000059.1 Protein Homology CDS 101689 101931 . - 0 ID=cds-WP_000639889.1;Parent=gene-C9E93_RS09630;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9E93_RS09630;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 102453 103373 . + . ID=gene-C9E93_RS09635;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9E93_RS09635;old_locus_tag=C9E93_09870 NZ_PYJV01000059.1 Protein Homology CDS 102453 103373 . + 0 ID=cds-WP_000484428.1;Parent=gene-C9E93_RS09635;Dbxref=GenBank:WP_000484428.1;Name=WP_000484428.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9E93_RS09635;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484428.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 103775 103846 . + . ID=gene-C9E93_RS09640;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9E93_RS09640;old_locus_tag=C9E93_09875 NZ_PYJV01000059.1 Protein Homology CDS 103775 103846 . + 0 ID=cds-WP_010723117.1;Parent=gene-C9E93_RS09640;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9E93_RS09640;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 103896 105134 . - . ID=gene-C9E93_RS09645;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9E93_RS09645;old_locus_tag=C9E93_09880 NZ_PYJV01000059.1 Protein Homology CDS 103896 105134 . - 0 ID=cds-WP_000763118.1;Parent=gene-C9E93_RS09645;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9E93_RS09645;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 105857 106822 . - . ID=gene-C9E93_RS09650;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9E93_RS09650;old_locus_tag=C9E93_09890 NZ_PYJV01000059.1 Protein Homology CDS 105857 106822 . - 0 ID=cds-WP_000170376.1;Parent=gene-C9E93_RS09650;Dbxref=GenBank:WP_000170376.1;Name=WP_000170376.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9E93_RS09650;product=glucokinase;protein_id=WP_000170376.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 107026 108261 . + . ID=gene-C9E93_RS09655;Name=C9E93_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09655;old_locus_tag=C9E93_09895 NZ_PYJV01000059.1 Protein Homology CDS 107026 108261 . + 0 ID=cds-WP_000468920.1;Parent=gene-C9E93_RS09655;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9E93_RS09655;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 108281 109933 . - . ID=gene-C9E93_RS09660;Name=C9E93_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09660;old_locus_tag=C9E93_09900 NZ_PYJV01000059.1 Protein Homology CDS 108281 109933 . - 0 ID=cds-WP_135370514.1;Parent=gene-C9E93_RS09660;Dbxref=GenBank:WP_135370514.1;Name=WP_135370514.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9E93_RS09660;product=alpha-keto acid decarboxylase family protein;protein_id=WP_135370514.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 110113 111111 . + . ID=gene-C9E93_RS09665;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9E93_RS09665;old_locus_tag=C9E93_09910 NZ_PYJV01000059.1 Protein Homology CDS 110113 111111 . + 0 ID=cds-WP_000640285.1;Parent=gene-C9E93_RS09665;Dbxref=GenBank:WP_000640285.1;Name=WP_000640285.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9E93_RS09665;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640285.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 111225 111551 . + . ID=gene-C9E93_RS09670;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=C9E93_RS09670;old_locus_tag=C9E93_09915 NZ_PYJV01000059.1 Protein Homology CDS 111225 111551 . + 0 ID=cds-WP_000490091.1;Parent=gene-C9E93_RS09670;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9E93_RS09670;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 111612 112853 . - . ID=gene-C9E93_RS09675;Name=C9E93_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09675;old_locus_tag=C9E93_09920 NZ_PYJV01000059.1 Protein Homology CDS 111612 112853 . - 0 ID=cds-WP_000131735.1;Parent=gene-C9E93_RS09675;Dbxref=GenBank:WP_000131735.1;Name=WP_000131735.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9E93_RS09675;product=Nramp family divalent metal transporter;protein_id=WP_000131735.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 112846 112923 . - . ID=gene-C9E93_RS24180;Name=C9E93_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24180 NZ_PYJV01000059.1 Protein Homology CDS 112846 112923 . - 0 ID=cds-WP_418144572.1;Parent=gene-C9E93_RS24180;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=C9E93_RS24180;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 113196 114398 . + . ID=gene-C9E93_RS09680;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9E93_RS09680;old_locus_tag=C9E93_09925 NZ_PYJV01000059.1 Protein Homology CDS 113196 114398 . + 0 ID=cds-WP_000376343.1;Parent=gene-C9E93_RS09680;Dbxref=GenBank:WP_000376343.1;Name=WP_000376343.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9E93_RS09680;product=nucleoside permease NupC;protein_id=WP_000376343.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 114451 116640 . - . ID=gene-C9E93_RS09685;Name=C9E93_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09685;old_locus_tag=C9E93_09930 NZ_PYJV01000059.1 Protein Homology CDS 114451 116640 . - 0 ID=cds-WP_135370515.1;Parent=gene-C9E93_RS09685;Dbxref=GenBank:WP_135370515.1;Name=WP_135370515.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9E93_RS09685;product=EAL domain-containing protein;protein_id=WP_135370515.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 116832 116907 . - . ID=gene-C9E93_RS09690;Name=C9E93_RS09690;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09690;old_locus_tag=C9E93_09935 NZ_PYJV01000059.1 tRNAscan-SE tRNA 116832 116907 . - . ID=rna-C9E93_RS09690;Parent=gene-C9E93_RS09690;anticodon=(pos:complement(116872..116874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09690;product=tRNA-Ala NZ_PYJV01000059.1 tRNAscan-SE exon 116832 116907 . - . ID=exon-C9E93_RS09690-1;Parent=rna-C9E93_RS09690;anticodon=(pos:complement(116872..116874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09690;product=tRNA-Ala NZ_PYJV01000059.1 RefSeq gene 117129 117491 . + . ID=gene-C9E93_RS09695;Name=C9E93_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09695;old_locus_tag=C9E93_09945 NZ_PYJV01000059.1 Protein Homology CDS 117129 117491 . + 0 ID=cds-WP_000472034.1;Parent=gene-C9E93_RS09695;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9E93_RS09695;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 117493 117885 . + . ID=gene-C9E93_RS09700;Name=C9E93_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09700;old_locus_tag=C9E93_09950 NZ_PYJV01000059.1 Protein Homology CDS 117493 117885 . + 0 ID=cds-WP_000826514.1;Parent=gene-C9E93_RS09700;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9E93_RS09700;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 117939 119354 . - . ID=gene-C9E93_RS09705;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9E93_RS09705;old_locus_tag=C9E93_09955 NZ_PYJV01000059.1 Protein Homology CDS 117939 119354 . - 0 ID=cds-WP_000695623.1;Parent=gene-C9E93_RS09705;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9E93_RS09705;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_PYJV01000059.1 RefSeq gene 119613 119688 . + . ID=gene-C9E93_RS09710;Name=C9E93_RS09710;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09710;old_locus_tag=C9E93_09960 NZ_PYJV01000059.1 tRNAscan-SE tRNA 119613 119688 . + . ID=rna-C9E93_RS09710;Parent=gene-C9E93_RS09710;anticodon=(pos:119646..119648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09710;product=tRNA-Val NZ_PYJV01000059.1 tRNAscan-SE exon 119613 119688 . + . ID=exon-C9E93_RS09710-1;Parent=rna-C9E93_RS09710;anticodon=(pos:119646..119648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09710;product=tRNA-Val ##sequence-region NZ_PYJV01000041.1 1 29365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000041.1 RefSeq region 1 29365 . + . ID=NZ_PYJV01000041.1:1..29365;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000041.1 RefSeq gene 1 214 . - . ID=gene-C9E93_RS06205;Name=C9E93_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06205;old_locus_tag=C9E93_06405;partial=true;start_range=.,1 NZ_PYJV01000041.1 Protein Homology CDS 1 214 . - 0 ID=cds-WP_000031662.1;Parent=gene-C9E93_RS06205;Dbxref=GenBank:WP_000031662.1;Name=WP_000031662.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E93_RS06205;partial=true;product=GTP-binding protein;protein_id=WP_000031662.1;start_range=.,1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 286 2400 . - . ID=gene-C9E93_RS06210;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9E93_RS06210;old_locus_tag=C9E93_06410 NZ_PYJV01000041.1 Protein Homology CDS 286 2400 . - 0 ID=cds-WP_000124693.1;Parent=gene-C9E93_RS06210;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9E93_RS06210;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 2497 2967 . - . ID=gene-C9E93_RS06215;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9E93_RS06215;old_locus_tag=C9E93_06415 NZ_PYJV01000041.1 Protein Homology CDS 2497 2967 . - 0 ID=cds-WP_001138042.1;Parent=gene-C9E93_RS06215;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9E93_RS06215;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 3063 3437 . - . ID=gene-C9E93_RS06220;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9E93_RS06220;old_locus_tag=C9E93_06420 NZ_PYJV01000041.1 Protein Homology CDS 3063 3437 . - 0 ID=cds-WP_000246815.1;Parent=gene-C9E93_RS06220;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9E93_RS06220;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 3563 3850 . - . ID=gene-C9E93_RS06225;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9E93_RS06225;old_locus_tag=C9E93_06425 NZ_PYJV01000041.1 Protein Homology CDS 3563 3850 . - 0 ID=cds-WP_135370476.1;Parent=gene-C9E93_RS06225;Dbxref=GenBank:WP_135370476.1;Name=WP_135370476.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9E93_RS06225;product=sulfurtransferase complex subunit TusB;protein_id=WP_135370476.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 3858 4214 . - . ID=gene-C9E93_RS06230;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9E93_RS06230;old_locus_tag=C9E93_06430 NZ_PYJV01000041.1 Protein Homology CDS 3858 4214 . - 0 ID=cds-WP_023250746.1;Parent=gene-C9E93_RS06230;Dbxref=GenBank:WP_023250746.1;Name=WP_023250746.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9E93_RS06230;product=sulfurtransferase complex subunit TusC;protein_id=WP_023250746.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 4214 4600 . - . ID=gene-C9E93_RS06235;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9E93_RS06235;old_locus_tag=C9E93_06435 NZ_PYJV01000041.1 Protein Homology CDS 4214 4600 . - 0 ID=cds-WP_001268011.1;Parent=gene-C9E93_RS06235;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9E93_RS06235;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 4600 5322 . - . ID=gene-C9E93_RS06240;Name=C9E93_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06240;old_locus_tag=C9E93_06440 NZ_PYJV01000041.1 Protein Homology CDS 4600 5322 . - 0 ID=cds-WP_000091471.1;Parent=gene-C9E93_RS06240;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9E93_RS06240;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 5599 6417 . - . ID=gene-C9E93_RS06245;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9E93_RS06245;old_locus_tag=C9E93_06445 NZ_PYJV01000041.1 Protein Homology CDS 5599 6417 . - 0 ID=cds-WP_000838222.1;Parent=gene-C9E93_RS06245;Dbxref=GenBank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9E93_RS06245;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 6637 6855 . + . ID=gene-C9E93_RS06250;Name=C9E93_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06250;old_locus_tag=C9E93_06450 NZ_PYJV01000041.1 Protein Homology CDS 6637 6855 . + 0 ID=cds-WP_001152701.1;Parent=gene-C9E93_RS06250;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9E93_RS06250;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 7044 7634 . - . ID=gene-C9E93_RS06255;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=C9E93_RS06255;old_locus_tag=C9E93_06460 NZ_PYJV01000041.1 Protein Homology CDS 7044 7634 . - 0 ID=cds-WP_000861341.1;Parent=gene-C9E93_RS06255;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9E93_RS06255;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 7729 7929 . - . ID=gene-C9E93_RS06260;Name=C9E93_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06260;old_locus_tag=C9E93_06465 NZ_PYJV01000041.1 Protein Homology CDS 7729 7929 . - 0 ID=cds-WP_001007735.1;Parent=gene-C9E93_RS06260;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9E93_RS06260;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 7939 9744 . - . ID=gene-C9E93_RS06265;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9E93_RS06265;old_locus_tag=C9E93_06470 NZ_PYJV01000041.1 Protein Homology CDS 7939 9744 . - 0 ID=cds-WP_017465352.1;Parent=gene-C9E93_RS06265;Dbxref=GenBank:WP_017465352.1;Name=WP_017465352.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9E93_RS06265;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_017465352.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 9744 10295 . - . ID=gene-C9E93_RS06270;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9E93_RS06270;old_locus_tag=C9E93_06475 NZ_PYJV01000041.1 Protein Homology CDS 9744 10295 . - 0 ID=cds-WP_000081820.1;Parent=gene-C9E93_RS06270;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9E93_RS06270;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 10561 12468 . + . ID=gene-C9E93_RS06275;Name=C9E93_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06275;old_locus_tag=C9E93_06480 NZ_PYJV01000041.1 Protein Homology CDS 10561 12468 . + 0 ID=cds-WP_000634758.1;Parent=gene-C9E93_RS06275;Dbxref=GenBank:WP_000634758.1;Name=WP_000634758.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9E93_RS06275;product=ABC transporter ATP-binding protein;protein_id=WP_000634758.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 12507 12728 . + . ID=gene-C9E93_RS06280;Name=C9E93_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06280;old_locus_tag=C9E93_06485 NZ_PYJV01000041.1 Protein Homology CDS 12507 12728 . + 0 ID=cds-WP_023204108.1;Parent=gene-C9E93_RS06280;Dbxref=GenBank:WP_023204108.1;Name=WP_023204108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9E93_RS06280;product=LysR family transcriptional regulator;protein_id=WP_023204108.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 12730 13041 . - . ID=gene-C9E93_RS06285;Name=C9E93_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06285;old_locus_tag=C9E93_06490 NZ_PYJV01000041.1 Protein Homology CDS 12730 13041 . - 0 ID=cds-WP_023204109.1;Parent=gene-C9E93_RS06285;Dbxref=GenBank:WP_023204109.1;Name=WP_023204109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9E93_RS06285;product=monooxygenase;protein_id=WP_023204109.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 13239 14306 . + . ID=gene-C9E93_RS06290;Name=C9E93_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06290;old_locus_tag=C9E93_06495 NZ_PYJV01000041.1 Protein Homology CDS 13239 14306 . + 0 ID=cds-WP_001214115.1;Parent=gene-C9E93_RS06290;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9E93_RS06290;product=hydrolase;protein_id=WP_001214115.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 14303 14521 . + . ID=gene-C9E93_RS06295;Name=C9E93_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06295;old_locus_tag=C9E93_06500 NZ_PYJV01000041.1 Protein Homology CDS 14303 14521 . + 0 ID=cds-WP_000586568.1;Parent=gene-C9E93_RS06295;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9E93_RS06295;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 14573 15442 . + . ID=gene-C9E93_RS06300;Name=C9E93_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06300;old_locus_tag=C9E93_06505 NZ_PYJV01000041.1 Protein Homology CDS 14573 15442 . + 0 ID=cds-WP_001274690.1;Parent=gene-C9E93_RS06300;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9E93_RS06300;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 15538 15942 . - . ID=gene-C9E93_RS06305;Name=C9E93_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06305;old_locus_tag=C9E93_06510 NZ_PYJV01000041.1 Protein Homology CDS 15538 15942 . - 0 ID=cds-WP_001148919.1;Parent=gene-C9E93_RS06305;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9E93_RS06305;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 16250 16882 . + . ID=gene-C9E93_RS06310;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9E93_RS06310;old_locus_tag=C9E93_06515 NZ_PYJV01000041.1 Protein Homology CDS 16250 16882 . + 0 ID=cds-WP_000242758.1;Parent=gene-C9E93_RS06310;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9E93_RS06310;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 16931 19018 . + . ID=gene-C9E93_RS06315;Name=C9E93_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06315;old_locus_tag=C9E93_06520 NZ_PYJV01000041.1 Protein Homology CDS 16931 19018 . + 0 ID=cds-WP_000269311.1;Parent=gene-C9E93_RS06315;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9E93_RS06315;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 19061 20278 . - . ID=gene-C9E93_RS06320;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=C9E93_RS06320;old_locus_tag=C9E93_06525 NZ_PYJV01000041.1 Protein Homology CDS 19061 20278 . - 0 ID=cds-WP_000190023.1;Parent=gene-C9E93_RS06320;Dbxref=GenBank:WP_000190023.1;Name=WP_000190023.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9E93_RS06320;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190023.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 20364 20927 . - . ID=gene-C9E93_RS06325;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9E93_RS06325;old_locus_tag=C9E93_06530 NZ_PYJV01000041.1 Protein Homology CDS 20364 20927 . - 0 ID=cds-WP_000601880.1;Parent=gene-C9E93_RS06325;Dbxref=GenBank:WP_000601880.1;Name=WP_000601880.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9E93_RS06325;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601880.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 20959 21561 . - . ID=gene-C9E93_RS06330;Name=C9E93_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06330;old_locus_tag=C9E93_06535 NZ_PYJV01000041.1 Protein Homology CDS 20959 21561 . - 0 ID=cds-WP_135370477.1;Parent=gene-C9E93_RS06330;Dbxref=GenBank:WP_135370477.1;Name=WP_135370477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9E93_RS06330;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_135370477.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 21551 21718 . - . ID=gene-C9E93_RS06335;Name=C9E93_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06335;old_locus_tag=C9E93_06540 NZ_PYJV01000041.1 Protein Homology CDS 21551 21718 . - 0 ID=cds-WP_001519136.1;Parent=gene-C9E93_RS06335;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9E93_RS06335;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 21827 22399 . - . ID=gene-C9E93_RS06340;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9E93_RS06340;old_locus_tag=C9E93_06545 NZ_PYJV01000041.1 Protein Homology CDS 21827 22399 . - 0 ID=cds-WP_000920478.1;Parent=gene-C9E93_RS06340;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9E93_RS06340;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 22676 23857 . + . ID=gene-C9E93_RS06345;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9E93_RS06345;old_locus_tag=C9E93_06550 NZ_PYJV01000041.1 Protein Homology CDS 22676 23857 . + 0 ID=cds-WP_000185267.1;Parent=gene-C9E93_RS06345;Dbxref=GenBank:WP_000185267.1;Name=WP_000185267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9E93_RS06345;product=MFS transporter TsgA;protein_id=WP_000185267.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 24119 26662 . + . ID=gene-C9E93_RS06350;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=C9E93_RS06350;old_locus_tag=C9E93_06555 NZ_PYJV01000041.1 Protein Homology CDS 24119 26662 . + 0 ID=cds-WP_135370478.1;Parent=gene-C9E93_RS06350;Dbxref=GenBank:WP_135370478.1;Name=WP_135370478.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9E93_RS06350;product=NADPH-nitrite reductase large subunit;protein_id=WP_135370478.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 26659 26985 . + . ID=gene-C9E93_RS06355;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9E93_RS06355;old_locus_tag=C9E93_06560 NZ_PYJV01000041.1 Protein Homology CDS 26659 26985 . + 0 ID=cds-WP_000084814.1;Parent=gene-C9E93_RS06355;Dbxref=GenBank:WP_000084814.1;Name=WP_000084814.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9E93_RS06355;product=nitrite reductase small subunit NirD;protein_id=WP_000084814.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 27167 27976 . + . ID=gene-C9E93_RS06360;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9E93_RS06360;old_locus_tag=C9E93_06565 NZ_PYJV01000041.1 Protein Homology CDS 27167 27976 . + 0 ID=cds-WP_000493576.1;Parent=gene-C9E93_RS06360;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=C9E93_RS06360;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_PYJV01000041.1 RefSeq gene 27988 29361 . + . ID=gene-C9E93_RS06365;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9E93_RS06365;old_locus_tag=C9E93_06570 NZ_PYJV01000041.1 Protein Homology CDS 27988 29361 . + 0 ID=cds-WP_000349897.1;Parent=gene-C9E93_RS06365;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9E93_RS06365;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11 ##sequence-region NZ_PYJV01000113.1 1 28473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000113.1 RefSeq region 1 28473 . + . ID=NZ_PYJV01000113.1:1..28473;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000113.1 RefSeq gene 1 208 . + . ID=gene-C9E93_RS23790;Name=C9E93_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23790;old_locus_tag=C9E93_21230;partial=true;start_range=.,1 NZ_PYJV01000113.1 GeneMarkS-2+ CDS 1 208 . + 1 ID=cds-WP_217810216.1;Parent=gene-C9E93_RS23790;Dbxref=GenBank:WP_217810216.1;Name=WP_217810216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23790;partial=true;product=hypothetical protein;protein_id=WP_217810216.1;start_range=.,1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 250 927 . - . ID=gene-C9E93_RS20690;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E93_RS20690;old_locus_tag=C9E93_21235 NZ_PYJV01000113.1 Protein Homology CDS 250 927 . - 0 ID=cds-WP_000545594.1;Parent=gene-C9E93_RS20690;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9E93_RS20690;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 927 1637 . - . ID=gene-C9E93_RS20695;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9E93_RS20695;old_locus_tag=C9E93_21240 NZ_PYJV01000113.1 Protein Homology CDS 927 1637 . - 0 ID=cds-WP_080194682.1;Parent=gene-C9E93_RS20695;Dbxref=GenBank:WP_080194682.1;Name=WP_080194682.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9E93_RS20695;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_080194682.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 1634 3169 . - . ID=gene-C9E93_RS20700;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E93_RS20700;old_locus_tag=C9E93_21245 NZ_PYJV01000113.1 Protein Homology CDS 1634 3169 . - 0 ID=cds-WP_000702629.1;Parent=gene-C9E93_RS20700;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9E93_RS20700;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 3166 6909 . - . ID=gene-C9E93_RS20705;Name=C9E93_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20705;old_locus_tag=C9E93_21250 NZ_PYJV01000113.1 Protein Homology CDS 3166 6909 . - 0 ID=cds-WP_135370664.1;Parent=gene-C9E93_RS20705;Dbxref=GenBank:WP_135370664.1;Name=WP_135370664.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9E93_RS20705;product=nitrate reductase subunit alpha;protein_id=WP_135370664.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 7297 8694 . - . ID=gene-C9E93_RS20710;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=C9E93_RS20710;old_locus_tag=C9E93_21255 NZ_PYJV01000113.1 Protein Homology CDS 7297 8694 . - 0 ID=cds-WP_000019848.1;Parent=gene-C9E93_RS20710;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9E93_RS20710;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 9035 10831 . + . ID=gene-C9E93_RS20720;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9E93_RS20720;old_locus_tag=C9E93_21265 NZ_PYJV01000113.1 Protein Homology CDS 9035 10831 . + 0 ID=cds-WP_000476244.1;Parent=gene-C9E93_RS20720;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9E93_RS20720;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 10824 11474 . + . ID=gene-C9E93_RS20725;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9E93_RS20725;old_locus_tag=C9E93_21270 NZ_PYJV01000113.1 Protein Homology CDS 10824 11474 . + 0 ID=cds-WP_001064598.1;Parent=gene-C9E93_RS20725;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9E93_RS20725;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 11475 12899 . - . ID=gene-C9E93_RS20730;Name=C9E93_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20730;old_locus_tag=C9E93_21275 NZ_PYJV01000113.1 Protein Homology CDS 11475 12899 . - 0 ID=cds-WP_045900837.1;Parent=gene-C9E93_RS20730;Dbxref=GenBank:WP_045900837.1;Name=WP_045900837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9E93_RS20730;product=YchO/YchP family invasin;protein_id=WP_045900837.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 13076 13429 . + . ID=gene-C9E93_RS20735;Name=C9E93_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20735;old_locus_tag=C9E93_21280 NZ_PYJV01000113.1 Protein Homology CDS 13076 13429 . + 0 ID=cds-WP_001179794.1;Parent=gene-C9E93_RS20735;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9E93_RS20735;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 13509 13739 . - . ID=gene-C9E93_RS20740;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9E93_RS20740;old_locus_tag=C9E93_21285 NZ_PYJV01000113.1 Protein Homology CDS 13509 13739 . - 0 ID=cds-WP_001146392.1;Parent=gene-C9E93_RS20740;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9E93_RS20740;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 14006 15106 . + . ID=gene-C9E93_RS20745;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9E93_RS20745;old_locus_tag=C9E93_21290 NZ_PYJV01000113.1 Protein Homology CDS 14006 15106 . + 0 ID=cds-WP_000148418.1;Parent=gene-C9E93_RS20745;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9E93_RS20745;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 15160 16014 . - . ID=gene-C9E93_RS20750;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9E93_RS20750;old_locus_tag=C9E93_21295 NZ_PYJV01000113.1 Protein Homology CDS 15160 16014 . - 0 ID=cds-WP_000811046.1;Parent=gene-C9E93_RS20750;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9E93_RS20750;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 16052 16861 . - . ID=gene-C9E93_RS20755;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9E93_RS20755;old_locus_tag=C9E93_21300 NZ_PYJV01000113.1 Protein Homology CDS 16052 16861 . - 0 ID=cds-WP_001257065.1;Parent=gene-C9E93_RS20755;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9E93_RS20755;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 16865 17254 . - . ID=gene-C9E93_RS20760;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9E93_RS20760;old_locus_tag=C9E93_21305 NZ_PYJV01000113.1 Protein Homology CDS 16865 17254 . - 0 ID=cds-WP_000150667.1;Parent=gene-C9E93_RS20760;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9E93_RS20760;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 17251 18084 . - . ID=gene-C9E93_RS20765;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9E93_RS20765;old_locus_tag=C9E93_21310 NZ_PYJV01000113.1 Protein Homology CDS 17251 18084 . - 0 ID=cds-WP_000347312.1;Parent=gene-C9E93_RS20765;Dbxref=GenBank:WP_000347312.1;Name=WP_000347312.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9E93_RS20765;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347312.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 18084 19166 . - . ID=gene-C9E93_RS20770;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9E93_RS20770;old_locus_tag=C9E93_21315 NZ_PYJV01000113.1 Protein Homology CDS 18084 19166 . - 0 ID=cds-WP_023193328.1;Parent=gene-C9E93_RS20770;Dbxref=GenBank:WP_023193328.1;Name=WP_023193328.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9E93_RS20770;product=peptide chain release factor 1;protein_id=WP_023193328.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 19207 20463 . - . ID=gene-C9E93_RS20775;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9E93_RS20775;old_locus_tag=C9E93_21320 NZ_PYJV01000113.1 Protein Homology CDS 19207 20463 . - 0 ID=cds-WP_000173208.1;Parent=gene-C9E93_RS20775;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9E93_RS20775;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 20777 21400 . + . ID=gene-C9E93_RS20780;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9E93_RS20780;old_locus_tag=C9E93_21325 NZ_PYJV01000113.1 Protein Homology CDS 20777 21400 . + 0 ID=cds-WP_000174484.1;Parent=gene-C9E93_RS20780;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9E93_RS20780;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 21397 22248 . + . ID=gene-C9E93_RS20785;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9E93_RS20785;old_locus_tag=C9E93_21330 NZ_PYJV01000113.1 Protein Homology CDS 21397 22248 . + 0 ID=cds-WP_000988259.1;Parent=gene-C9E93_RS20785;Dbxref=GenBank:WP_000988259.1;Name=WP_000988259.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9E93_RS20785;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988259.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 22514 23461 . + . ID=gene-C9E93_RS20790;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9E93_RS20790;old_locus_tag=C9E93_21335 NZ_PYJV01000113.1 Protein Homology CDS 22514 23461 . + 0 ID=cds-WP_001518537.1;Parent=gene-C9E93_RS20790;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9E93_RS20790;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 23586 25271 . + . ID=gene-C9E93_RS20795;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9E93_RS20795;old_locus_tag=C9E93_21340 NZ_PYJV01000113.1 Protein Homology CDS 23586 25271 . + 0 ID=cds-WP_001037182.1;Parent=gene-C9E93_RS20795;Dbxref=GenBank:WP_001037182.1;Name=WP_001037182.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9E93_RS20795;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037182.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 25316 25594 . - . ID=gene-C9E93_RS20800;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9E93_RS20800;old_locus_tag=C9E93_21345 NZ_PYJV01000113.1 Protein Homology CDS 25316 25594 . - 0 ID=cds-WP_000823878.1;Parent=gene-C9E93_RS20800;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9E93_RS20800;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 25870 26454 . + . ID=gene-C9E93_RS20805;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9E93_RS20805;old_locus_tag=C9E93_21350 NZ_PYJV01000113.1 Protein Homology CDS 25870 26454 . + 0 ID=cds-WP_000985595.1;Parent=gene-C9E93_RS20805;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9E93_RS20805;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_PYJV01000113.1 RefSeq gene 26571 27662 . + . ID=gene-C9E93_RS20810;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9E93_RS20810;old_locus_tag=C9E93_21355 NZ_PYJV01000113.1 Protein Homology CDS 26571 27662 . + 0 ID=cds-WP_000505850.1;Parent=gene-C9E93_RS20810;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9E93_RS20810;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 ##sequence-region NZ_PYJV01000071.1 1 26108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000071.1 RefSeq region 1 26108 . + . ID=NZ_PYJV01000071.1:1..26108;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000071.1 RefSeq gene 247 441 . + . ID=gene-C9E93_RS11415;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9E93_RS11415;old_locus_tag=C9E93_11710 NZ_PYJV01000071.1 Protein Homology CDS 247 441 . + 0 ID=cds-WP_000289081.1;Parent=gene-C9E93_RS11415;Dbxref=GenBank:WP_000289081.1;Name=WP_000289081.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9E93_RS11415;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289081.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 514 990 . + . ID=gene-C9E93_RS11420;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9E93_RS11420;old_locus_tag=C9E93_11715 NZ_PYJV01000071.1 Protein Homology CDS 514 990 . + 0 ID=cds-WP_000675530.1;Parent=gene-C9E93_RS11420;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9E93_RS11420;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 987 1454 . - . ID=gene-C9E93_RS11425;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9E93_RS11425;old_locus_tag=C9E93_11720 NZ_PYJV01000071.1 Protein Homology CDS 987 1454 . - 0 ID=cds-WP_023232599.1;Parent=gene-C9E93_RS11425;Dbxref=GenBank:WP_023232599.1;Name=WP_023232599.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9E93_RS11425;product=prepilin peptidase;protein_id=WP_023232599.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 1834 2145 . + . ID=gene-C9E93_RS11430;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9E93_RS11430;old_locus_tag=C9E93_11730 NZ_PYJV01000071.1 Protein Homology CDS 1834 2145 . + 0 ID=cds-WP_001181005.1;Parent=gene-C9E93_RS11430;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9E93_RS11430;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 2178 2807 . + . ID=gene-C9E93_RS11435;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=C9E93_RS11435;old_locus_tag=C9E93_11735 NZ_PYJV01000071.1 Protein Homology CDS 2178 2807 . + 0 ID=cds-WP_000579838.1;Parent=gene-C9E93_RS11435;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9E93_RS11435;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 2818 3423 . + . ID=gene-C9E93_RS11440;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9E93_RS11440;old_locus_tag=C9E93_11740 NZ_PYJV01000071.1 Protein Homology CDS 2818 3423 . + 0 ID=cds-WP_000424395.1;Parent=gene-C9E93_RS11440;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9E93_RS11440;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 3420 3722 . + . ID=gene-C9E93_RS11445;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9E93_RS11445;old_locus_tag=C9E93_11745 NZ_PYJV01000071.1 Protein Homology CDS 3420 3722 . + 0 ID=cds-WP_000617546.1;Parent=gene-C9E93_RS11445;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9E93_RS11445;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 3740 4561 . + . ID=gene-C9E93_RS11450;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9E93_RS11450;old_locus_tag=C9E93_11750 NZ_PYJV01000071.1 Protein Homology CDS 3740 4561 . + 0 ID=cds-WP_000301869.1;Parent=gene-C9E93_RS11450;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9E93_RS11450;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 4578 4856 . + . ID=gene-C9E93_RS11455;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9E93_RS11455;old_locus_tag=C9E93_11755 NZ_PYJV01000071.1 Protein Homology CDS 4578 4856 . + 0 ID=cds-WP_001138115.1;Parent=gene-C9E93_RS11455;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9E93_RS11455;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 4871 5203 . + . ID=gene-C9E93_RS11460;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9E93_RS11460;old_locus_tag=C9E93_11760 NZ_PYJV01000071.1 Protein Homology CDS 4871 5203 . + 0 ID=cds-WP_000448832.1;Parent=gene-C9E93_RS11460;Dbxref=GenBank:WP_000448832.1;Name=WP_000448832.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9E93_RS11460;product=50S ribosomal protein L22;protein_id=WP_000448832.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 5221 5922 . + . ID=gene-C9E93_RS11465;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9E93_RS11465;old_locus_tag=C9E93_11765 NZ_PYJV01000071.1 Protein Homology CDS 5221 5922 . + 0 ID=cds-WP_000529945.1;Parent=gene-C9E93_RS11465;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9E93_RS11465;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 5935 6345 . + . ID=gene-C9E93_RS11470;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9E93_RS11470;old_locus_tag=C9E93_11770 NZ_PYJV01000071.1 Protein Homology CDS 5935 6345 . + 0 ID=cds-WP_000941208.1;Parent=gene-C9E93_RS11470;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9E93_RS11470;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 6345 6536 . + . ID=gene-C9E93_RS11475;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9E93_RS11475;old_locus_tag=C9E93_11775 NZ_PYJV01000071.1 Protein Homology CDS 6345 6536 . + 0 ID=cds-WP_000644742.1;Parent=gene-C9E93_RS11475;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9E93_RS11475;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 6536 6790 . + . ID=gene-C9E93_RS11480;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9E93_RS11480;old_locus_tag=C9E93_11780 NZ_PYJV01000071.1 Protein Homology CDS 6536 6790 . + 0 ID=cds-WP_000130101.1;Parent=gene-C9E93_RS11480;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9E93_RS11480;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 6954 7325 . + . ID=gene-C9E93_RS11485;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9E93_RS11485;old_locus_tag=C9E93_11785 NZ_PYJV01000071.1 Protein Homology CDS 6954 7325 . + 0 ID=cds-WP_000613954.1;Parent=gene-C9E93_RS11485;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9E93_RS11485;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 7336 7650 . + . ID=gene-C9E93_RS11490;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9E93_RS11490;old_locus_tag=C9E93_11790 NZ_PYJV01000071.1 Protein Homology CDS 7336 7650 . + 0 ID=cds-WP_000729185.1;Parent=gene-C9E93_RS11490;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9E93_RS11490;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 7665 8204 . + . ID=gene-C9E93_RS11495;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9E93_RS11495;old_locus_tag=C9E93_11795 NZ_PYJV01000071.1 Protein Homology CDS 7665 8204 . + 0 ID=cds-WP_001096206.1;Parent=gene-C9E93_RS11495;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9E93_RS11495;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 8219 8524 . + . ID=gene-C9E93_RS11500;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9E93_RS11500;old_locus_tag=C9E93_11800 NZ_PYJV01000071.1 Protein Homology CDS 8219 8524 . + 0 ID=cds-WP_001118932.1;Parent=gene-C9E93_RS11500;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9E93_RS11500;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 8558 8950 . + . ID=gene-C9E93_RS11505;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9E93_RS11505;old_locus_tag=C9E93_11805 NZ_PYJV01000071.1 Protein Homology CDS 8558 8950 . + 0 ID=cds-WP_000062611.1;Parent=gene-C9E93_RS11505;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9E93_RS11505;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 8963 9496 . + . ID=gene-C9E93_RS11510;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9E93_RS11510;old_locus_tag=C9E93_11810 NZ_PYJV01000071.1 Protein Homology CDS 8963 9496 . + 0 ID=cds-WP_000091939.1;Parent=gene-C9E93_RS11510;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9E93_RS11510;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 9506 9859 . + . ID=gene-C9E93_RS11515;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9E93_RS11515;old_locus_tag=C9E93_11815 NZ_PYJV01000071.1 Protein Homology CDS 9506 9859 . + 0 ID=cds-WP_000358956.1;Parent=gene-C9E93_RS11515;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9E93_RS11515;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 9874 10377 . + . ID=gene-C9E93_RS11520;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9E93_RS11520;old_locus_tag=C9E93_11820 NZ_PYJV01000071.1 Protein Homology CDS 9874 10377 . + 0 ID=cds-WP_000940121.1;Parent=gene-C9E93_RS11520;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9E93_RS11520;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 10381 10560 . + . ID=gene-C9E93_RS11525;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9E93_RS11525;old_locus_tag=C9E93_11825 NZ_PYJV01000071.1 Protein Homology CDS 10381 10560 . + 0 ID=cds-WP_001140434.1;Parent=gene-C9E93_RS11525;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9E93_RS11525;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 10564 10998 . + . ID=gene-C9E93_RS11530;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9E93_RS11530;old_locus_tag=C9E93_11830 NZ_PYJV01000071.1 Protein Homology CDS 10564 10998 . + 0 ID=cds-WP_001238917.1;Parent=gene-C9E93_RS11530;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9E93_RS11530;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 11006 12337 . + . ID=gene-C9E93_RS11535;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9E93_RS11535;old_locus_tag=C9E93_11835 NZ_PYJV01000071.1 Protein Homology CDS 11006 12337 . + 0 ID=cds-WP_001118864.1;Parent=gene-C9E93_RS11535;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9E93_RS11535;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 12369 12485 . + . ID=gene-C9E93_RS11540;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9E93_RS11540;old_locus_tag=C9E93_11840 NZ_PYJV01000071.1 Protein Homology CDS 12369 12485 . + 0 ID=cds-WP_000868187.1;Parent=gene-C9E93_RS11540;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9E93_RS11540;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 12632 12988 . + . ID=gene-C9E93_RS11545;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9E93_RS11545;old_locus_tag=C9E93_11845 NZ_PYJV01000071.1 Protein Homology CDS 12632 12988 . + 0 ID=cds-WP_000090780.1;Parent=gene-C9E93_RS11545;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9E93_RS11545;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 13005 13394 . + . ID=gene-C9E93_RS11550;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9E93_RS11550;old_locus_tag=C9E93_11850 NZ_PYJV01000071.1 Protein Homology CDS 13005 13394 . + 0 ID=cds-WP_001029758.1;Parent=gene-C9E93_RS11550;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9E93_RS11550;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 13428 14048 . + . ID=gene-C9E93_RS11555;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9E93_RS11555;old_locus_tag=C9E93_11855 NZ_PYJV01000071.1 Protein Homology CDS 13428 14048 . + 0 ID=cds-WP_000135226.1;Parent=gene-C9E93_RS11555;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9E93_RS11555;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 14074 15063 . + . ID=gene-C9E93_RS11560;Name=C9E93_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11560;old_locus_tag=C9E93_11860 NZ_PYJV01000071.1 Protein Homology CDS 14074 15063 . + 0 ID=cds-WP_001162094.1;Parent=gene-C9E93_RS11560;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9E93_RS11560;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 15104 15487 . + . ID=gene-C9E93_RS11565;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9E93_RS11565;old_locus_tag=C9E93_11865 NZ_PYJV01000071.1 Protein Homology CDS 15104 15487 . + 0 ID=cds-WP_001216370.1;Parent=gene-C9E93_RS11565;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9E93_RS11565;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 15595 15963 . + . ID=gene-C9E93_RS11570;Name=C9E93_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11570;old_locus_tag=C9E93_11870 NZ_PYJV01000071.1 Protein Homology CDS 15595 15963 . + 0 ID=cds-WP_085403114.1;Parent=gene-C9E93_RS11570;Dbxref=GenBank:WP_085403114.1;Name=WP_085403114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9E93_RS11570;product=DUF1992 domain-containing protein;protein_id=WP_085403114.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 15974 16399 . + . ID=gene-C9E93_RS11575;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9E93_RS11575;old_locus_tag=C9E93_11875 NZ_PYJV01000071.1 Protein Homology CDS 15974 16399 . + 0 ID=cds-WP_000285588.1;Parent=gene-C9E93_RS11575;Dbxref=GenBank:WP_000285588.1;Name=WP_000285588.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9E93_RS11575;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285588.1;transl_table=11 NZ_PYJV01000071.1 RefSeq pseudogene 16457 16660 . + . ID=gene-C9E93_RS11580;Name=C9E93_RS11580;end_range=16660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS11580;old_locus_tag=C9E93_11880;partial=true;pseudo=true NZ_PYJV01000071.1 Protein Homology CDS 16457 16660 . + 0 ID=cds-C9E93_RS11580;Parent=gene-C9E93_RS11580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=C9E93_RS11580;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 16662 17075 . - . ID=gene-C9E93_RS11585;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9E93_RS11585;old_locus_tag=C9E93_11885 NZ_PYJV01000071.1 Protein Homology CDS 16662 17075 . - 0 ID=cds-WP_000008119.1;Parent=gene-C9E93_RS11585;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9E93_RS11585;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 17217 18593 . - . ID=gene-C9E93_RS11590;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9E93_RS11590;old_locus_tag=C9E93_11890 NZ_PYJV01000071.1 Protein Homology CDS 17217 18593 . - 0 ID=cds-WP_000691374.1;Parent=gene-C9E93_RS11590;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9E93_RS11590;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 18615 19904 . - . ID=gene-C9E93_RS11595;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9E93_RS11595;old_locus_tag=C9E93_11895 NZ_PYJV01000071.1 Protein Homology CDS 18615 19904 . - 0 ID=cds-WP_135370164.1;Parent=gene-C9E93_RS11595;Dbxref=GenBank:WP_135370164.1;Name=WP_135370164.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9E93_RS11595;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_135370164.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 19956 20903 . - . ID=gene-C9E93_RS11600;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9E93_RS11600;old_locus_tag=C9E93_11900 NZ_PYJV01000071.1 Protein Homology CDS 19956 20903 . - 0 ID=cds-WP_001285171.1;Parent=gene-C9E93_RS11600;Dbxref=GenBank:WP_001285171.1;Name=WP_001285171.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9E93_RS11600;product=methionyl-tRNA formyltransferase;protein_id=WP_001285171.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 20919 21428 . - . ID=gene-C9E93_RS11605;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9E93_RS11605;old_locus_tag=C9E93_11905 NZ_PYJV01000071.1 Protein Homology CDS 20919 21428 . - 0 ID=cds-WP_000114987.1;Parent=gene-C9E93_RS11605;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9E93_RS11605;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 21560 22684 . + . ID=gene-C9E93_RS11610;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9E93_RS11610;old_locus_tag=C9E93_11910 NZ_PYJV01000071.1 Protein Homology CDS 21560 22684 . + 0 ID=cds-WP_079827318.1;Parent=gene-C9E93_RS11610;Dbxref=GenBank:WP_079827318.1;Name=WP_079827318.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9E93_RS11610;product=DNA-protecting protein DprA;protein_id=WP_079827318.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 22656 23129 . + . ID=gene-C9E93_RS11615;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9E93_RS11615;old_locus_tag=C9E93_11915 NZ_PYJV01000071.1 Protein Homology CDS 22656 23129 . + 0 ID=cds-WP_000460663.1;Parent=gene-C9E93_RS11615;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9E93_RS11615;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 23156 23698 . + . ID=gene-C9E93_RS11620;Name=C9E93_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11620;old_locus_tag=C9E93_11920 NZ_PYJV01000071.1 Protein Homology CDS 23156 23698 . + 0 ID=cds-WP_001129708.1;Parent=gene-C9E93_RS11620;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9E93_RS11620;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 23703 24275 . + . ID=gene-C9E93_RS11625;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9E93_RS11625;old_locus_tag=C9E93_11925 NZ_PYJV01000071.1 Protein Homology CDS 23703 24275 . + 0 ID=cds-WP_001063613.1;Parent=gene-C9E93_RS11625;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9E93_RS11625;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 24280 25098 . + . ID=gene-C9E93_RS11630;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9E93_RS11630;old_locus_tag=C9E93_11930 NZ_PYJV01000071.1 Protein Homology CDS 24280 25098 . + 0 ID=cds-WP_000451200.1;Parent=gene-C9E93_RS11630;Dbxref=GenBank:WP_000451200.1;Name=WP_000451200.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9E93_RS11630;product=shikimate dehydrogenase;protein_id=WP_000451200.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 25095 25352 . + . ID=gene-C9E93_RS11635;Name=C9E93_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11635;old_locus_tag=C9E93_11935 NZ_PYJV01000071.1 Protein Homology CDS 25095 25352 . + 0 ID=cds-WP_001070575.1;Parent=gene-C9E93_RS11635;Dbxref=GenBank:WP_001070575.1;Name=WP_001070575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9E93_RS11635;product=DUF1488 domain-containing protein;protein_id=WP_001070575.1;transl_table=11 NZ_PYJV01000071.1 RefSeq gene 25328 25882 . - . ID=gene-C9E93_RS11640;Name=C9E93_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11640;old_locus_tag=C9E93_11940 NZ_PYJV01000071.1 Protein Homology CDS 25328 25882 . - 0 ID=cds-WP_001285635.1;Parent=gene-C9E93_RS11640;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9E93_RS11640;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 ##sequence-region NZ_PYJV01000131.1 1 24192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000131.1 RefSeq region 1 24192 . + . ID=NZ_PYJV01000131.1:1..24192;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000131.1 RefSeq gene 1 571 . - . ID=gene-C9E93_RS23410;Name=C9E93_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23410;old_locus_tag=C9E93_24045;partial=true;start_range=.,1 NZ_PYJV01000131.1 Protein Homology CDS 1 571 . - 0 ID=cds-WP_135400650.1;Parent=gene-C9E93_RS23410;Dbxref=GenBank:WP_135400650.1;Name=WP_135400650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356512.1;locus_tag=C9E93_RS23410;partial=true;product=hypothetical protein;protein_id=WP_135400650.1;start_range=.,1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 612 1481 . - . ID=gene-C9E93_RS23415;Name=C9E93_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23415;old_locus_tag=C9E93_24050 NZ_PYJV01000131.1 GeneMarkS-2+ CDS 612 1481 . - 0 ID=cds-WP_079953566.1;Parent=gene-C9E93_RS23415;Dbxref=GenBank:WP_079953566.1;Name=WP_079953566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23415;product=hypothetical protein;protein_id=WP_079953566.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 1630 2412 . + . ID=gene-C9E93_RS23420;Name=C9E93_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23420;old_locus_tag=C9E93_24055 NZ_PYJV01000131.1 Protein Homology CDS 1630 2412 . + 0 ID=cds-WP_217810218.1;Parent=gene-C9E93_RS23420;Dbxref=GenBank:WP_217810218.1;Name=WP_217810218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424109.1;locus_tag=C9E93_RS23420;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_217810218.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 2399 3328 . + . ID=gene-C9E93_RS23425;Name=C9E93_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23425;old_locus_tag=C9E93_24060 NZ_PYJV01000131.1 Protein Homology CDS 2399 3328 . + 0 ID=cds-WP_057935480.1;Parent=gene-C9E93_RS23425;Dbxref=GenBank:WP_057935480.1;Name=WP_057935480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365810.1;locus_tag=C9E93_RS23425;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_057935480.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 3553 4710 . - . ID=gene-C9E93_RS23430;Name=C9E93_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23430;old_locus_tag=C9E93_24065 NZ_PYJV01000131.1 Protein Homology CDS 3553 4710 . - 0 ID=cds-WP_135370235.1;Parent=gene-C9E93_RS23430;Dbxref=GenBank:WP_135370235.1;Name=WP_135370235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806483.1;locus_tag=C9E93_RS23430;product=DUF3322 domain-containing protein;protein_id=WP_135370235.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 4712 6058 . - . ID=gene-C9E93_RS24105;Name=C9E93_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24105 NZ_PYJV01000131.1 Protein Homology CDS 4712 6058 . - 0 ID=cds-WP_440591215.1;Parent=gene-C9E93_RS24105;Dbxref=GenBank:WP_440591215.1;Name=WP_440591215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002379578.1;locus_tag=C9E93_RS24105;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_440591215.1;transl_table=11 NZ_PYJV01000131.1 RefSeq pseudogene 7796 7999 . - . ID=gene-C9E93_RS24110;Name=C9E93_RS24110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24110;partial=true;pseudo=true;start_range=.,7796 NZ_PYJV01000131.1 Protein Homology CDS 7796 7999 . - 0 ID=cds-C9E93_RS24110;Parent=gene-C9E93_RS24110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024944.6;locus_tag=C9E93_RS24110;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,7796;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 7996 8745 . - . ID=gene-C9E93_RS23440;Name=C9E93_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23440;old_locus_tag=C9E93_24075 NZ_PYJV01000131.1 Protein Homology CDS 7996 8745 . - 0 ID=cds-WP_176452589.1;Parent=gene-C9E93_RS23440;Dbxref=GenBank:WP_176452589.1;Name=WP_176452589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145526.1;locus_tag=C9E93_RS23440;product=DUF4194 domain-containing protein;protein_id=WP_176452589.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 8751 10247 . - . ID=gene-C9E93_RS23445;Name=C9E93_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23445;old_locus_tag=C9E93_24080 NZ_PYJV01000131.1 Protein Homology CDS 8751 10247 . - 0 ID=cds-WP_135370237.1;Parent=gene-C9E93_RS23445;Dbxref=GenBank:WP_135370237.1;Name=WP_135370237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806486.1;locus_tag=C9E93_RS23445;product=DUF3375 domain-containing protein;protein_id=WP_135370237.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 10916 11092 . + . ID=gene-C9E93_RS24115;Name=C9E93_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24115 NZ_PYJV01000131.1 Protein Homology CDS 10916 11092 . + 0 ID=cds-WP_369597815.1;Parent=gene-C9E93_RS24115;Dbxref=GenBank:WP_369597815.1;Name=WP_369597815.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9E93_RS24115;product=Arm DNA-binding domain-containing protein;protein_id=WP_369597815.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 11283 12197 . - . ID=gene-C9E93_RS23450;Name=C9E93_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23450;old_locus_tag=C9E93_24090 NZ_PYJV01000131.1 Protein Homology CDS 11283 12197 . - 0 ID=cds-WP_135370238.1;Parent=gene-C9E93_RS23450;Dbxref=GenBank:WP_135370238.1;Name=WP_135370238.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=C9E93_RS23450;product=LysR family transcriptional regulator;protein_id=WP_135370238.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 12298 12921 . + . ID=gene-C9E93_RS23455;Name=C9E93_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23455;old_locus_tag=C9E93_24095 NZ_PYJV01000131.1 Protein Homology CDS 12298 12921 . + 0 ID=cds-WP_000697438.1;Parent=gene-C9E93_RS23455;Dbxref=GenBank:WP_000697438.1;Name=WP_000697438.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=C9E93_RS23455;product=FMN-dependent NADH-azoreductase;protein_id=WP_000697438.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 12947 13210 . + . ID=gene-C9E93_RS23460;Name=C9E93_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23460;old_locus_tag=C9E93_24100 NZ_PYJV01000131.1 Protein Homology CDS 12947 13210 . + 0 ID=cds-WP_135370239.1;Parent=gene-C9E93_RS23460;Dbxref=GenBank:WP_135370239.1;Name=WP_135370239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=C9E93_RS23460;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_135370239.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 13286 14605 . + . ID=gene-C9E93_RS23465;Name=C9E93_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23465;old_locus_tag=C9E93_24105 NZ_PYJV01000131.1 Protein Homology CDS 13286 14605 . + 0 ID=cds-WP_135370240.1;Parent=gene-C9E93_RS23465;Dbxref=GenBank:WP_135370240.1;Name=WP_135370240.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=C9E93_RS23465;product=ferredoxin reductase family protein;protein_id=WP_135370240.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 16316 16999 . + . ID=gene-C9E93_RS23485;Name=C9E93_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23485;old_locus_tag=C9E93_24125 NZ_PYJV01000131.1 Protein Homology CDS 16316 16999 . + 0 ID=cds-WP_115285027.1;Parent=gene-C9E93_RS23485;Dbxref=GenBank:WP_115285027.1;Name=WP_115285027.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9E93_RS23485;product=helix-turn-helix transcriptional regulator;protein_id=WP_115285027.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 17104 17661 . - . ID=gene-C9E93_RS23490;Name=C9E93_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23490;old_locus_tag=C9E93_24130 NZ_PYJV01000131.1 Protein Homology CDS 17104 17661 . - 0 ID=cds-WP_000100101.1;Parent=gene-C9E93_RS23490;Dbxref=GenBank:WP_000100101.1;Name=WP_000100101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9E93_RS23490;product=DUF3156 family protein;protein_id=WP_000100101.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 17639 19138 . - . ID=gene-C9E93_RS23495;Name=C9E93_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23495;old_locus_tag=C9E93_24135 NZ_PYJV01000131.1 Protein Homology CDS 17639 19138 . - 0 ID=cds-WP_000475960.1;Parent=gene-C9E93_RS23495;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9E93_RS23495;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 19347 19721 . - . ID=gene-C9E93_RS23500;Name=C9E93_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23500;old_locus_tag=C9E93_24140 NZ_PYJV01000131.1 Protein Homology CDS 19347 19721 . - 0 ID=cds-WP_000542982.1;Parent=gene-C9E93_RS23500;Dbxref=GenBank:WP_000542982.1;Name=WP_000542982.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9E93_RS23500;product=cupin domain-containing protein;protein_id=WP_000542982.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 19736 21037 . - . ID=gene-C9E93_RS23505;Name=C9E93_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23505;old_locus_tag=C9E93_24145 NZ_PYJV01000131.1 Protein Homology CDS 19736 21037 . - 0 ID=cds-WP_001092814.1;Parent=gene-C9E93_RS23505;Dbxref=GenBank:WP_001092814.1;Name=WP_001092814.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9E93_RS23505;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092814.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 21199 22683 . + . ID=gene-C9E93_RS23510;Name=C9E93_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23510;old_locus_tag=C9E93_24150 NZ_PYJV01000131.1 Protein Homology CDS 21199 22683 . + 0 ID=cds-WP_080232032.1;Parent=gene-C9E93_RS23510;Dbxref=GenBank:WP_080232032.1;Name=WP_080232032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9E93_RS23510;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_080232032.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 22815 23198 . - . ID=gene-C9E93_RS23515;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9E93_RS23515;old_locus_tag=C9E93_24155 NZ_PYJV01000131.1 Protein Homology CDS 22815 23198 . - 0 ID=cds-WP_023202720.1;Parent=gene-C9E93_RS23515;Dbxref=GenBank:WP_023202720.1;Name=WP_023202720.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537588.1;locus_tag=C9E93_RS23515;product=anti-adapter protein IraD;protein_id=WP_023202720.1;transl_table=11 NZ_PYJV01000131.1 RefSeq gene 23198 23683 . - . ID=gene-C9E93_RS23520;Name=C9E93_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23520;old_locus_tag=C9E93_24160 NZ_PYJV01000131.1 Protein Homology CDS 23198 23683 . - 0 ID=cds-WP_000338762.1;Parent=gene-C9E93_RS23520;Dbxref=GenBank:WP_000338762.1;Name=WP_000338762.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9E93_RS23520;product=Hcp family type VI secretion system effector;protein_id=WP_000338762.1;transl_table=11 ##sequence-region NZ_PYJV01000037.1 1 21500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000037.1 RefSeq region 1 21500 . + . ID=NZ_PYJV01000037.1:1..21500;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000037.1 RefSeq gene 1 122 . + . ID=gene-C9E93_RS24160;Name=C9E93_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24160;partial=true;start_range=.,1 NZ_PYJV01000037.1 Protein Homology CDS 1 122 . + 2 ID=cds-WP_426457366.1;Parent=gene-C9E93_RS24160;Dbxref=GenBank:WP_426457366.1;Name=WP_426457366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920270.1;locus_tag=C9E93_RS24160;partial=true;product=hypothetical protein;protein_id=WP_426457366.1;start_range=.,1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 304 1668 . + . ID=gene-C9E93_RS06070;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9E93_RS06070;old_locus_tag=C9E93_06270 NZ_PYJV01000037.1 Protein Homology CDS 304 1668 . + 0 ID=cds-WP_000007059.1;Parent=gene-C9E93_RS06070;Dbxref=GenBank:WP_000007059.1;Name=WP_000007059.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9E93_RS06070;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007059.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 1876 4020 . + . ID=gene-C9E93_RS06075;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9E93_RS06075;old_locus_tag=C9E93_06275 NZ_PYJV01000037.1 Protein Homology CDS 1876 4020 . + 0 ID=cds-WP_001218630.1;Parent=gene-C9E93_RS06075;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9E93_RS06075;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 4050 5024 . + . ID=gene-C9E93_RS06080;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9E93_RS06080;old_locus_tag=C9E93_06280 NZ_PYJV01000037.1 Protein Homology CDS 4050 5024 . + 0 ID=cds-WP_080068186.1;Parent=gene-C9E93_RS06080;Dbxref=GenBank:WP_080068186.1;Name=WP_080068186.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9E93_RS06080;product=DNA-binding protein YbiB;protein_id=WP_080068186.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 5180 5440 . - . ID=gene-C9E93_RS06085;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9E93_RS06085;old_locus_tag=C9E93_06285 NZ_PYJV01000037.1 Protein Homology CDS 5180 5440 . - 0 ID=cds-WP_000849089.1;Parent=gene-C9E93_RS06085;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9E93_RS06085;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 5725 5991 . - . ID=gene-C9E93_RS06090;Name=C9E93_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06090;old_locus_tag=C9E93_06290 NZ_PYJV01000037.1 Protein Homology CDS 5725 5991 . - 0 ID=cds-WP_000146330.1;Parent=gene-C9E93_RS06090;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9E93_RS06090;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 6196 7122 . + . ID=gene-C9E93_RS06095;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9E93_RS06095;old_locus_tag=C9E93_06295 NZ_PYJV01000037.1 Protein Homology CDS 6196 7122 . + 0 ID=cds-WP_001275962.1;Parent=gene-C9E93_RS06095;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9E93_RS06095;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 7119 9341 . - . ID=gene-C9E93_RS06100;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9E93_RS06100;old_locus_tag=C9E93_06300 NZ_PYJV01000037.1 Protein Homology CDS 7119 9341 . - 0 ID=cds-WP_023197983.1;Parent=gene-C9E93_RS06100;Dbxref=GenBank:WP_023197983.1;Name=WP_023197983.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9E93_RS06100;product=mechanosensitive channel protein;protein_id=WP_023197983.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 9460 10182 . - . ID=gene-C9E93_RS06105;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9E93_RS06105;old_locus_tag=C9E93_06305 NZ_PYJV01000037.1 Protein Homology CDS 9460 10182 . - 0 ID=cds-WP_000569093.1;Parent=gene-C9E93_RS06105;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9E93_RS06105;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 10179 10838 . - . ID=gene-C9E93_RS06110;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9E93_RS06110;old_locus_tag=C9E93_06310 NZ_PYJV01000037.1 Protein Homology CDS 10179 10838 . - 0 ID=cds-WP_001159076.1;Parent=gene-C9E93_RS06110;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9E93_RS06110;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 10984 11730 . - . ID=gene-C9E93_RS06115;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9E93_RS06115;old_locus_tag=C9E93_06315 NZ_PYJV01000037.1 Protein Homology CDS 10984 11730 . - 0 ID=cds-WP_000838671.1;Parent=gene-C9E93_RS06115;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9E93_RS06115;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 12207 12710 . - . ID=gene-C9E93_RS06120;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9E93_RS06120;old_locus_tag=C9E93_06320 NZ_PYJV01000037.1 Protein Homology CDS 12207 12710 . - 0 ID=cds-WP_000100805.1;Parent=gene-C9E93_RS06120;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9E93_RS06120;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 13013 13900 . - . ID=gene-C9E93_RS06125;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9E93_RS06125;old_locus_tag=C9E93_06325 NZ_PYJV01000037.1 Protein Homology CDS 13013 13900 . - 0 ID=cds-WP_001119554.1;Parent=gene-C9E93_RS06125;Dbxref=GenBank:WP_001119554.1;Name=WP_001119554.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9E93_RS06125;product=threonine/homoserine exporter RhtA;protein_id=WP_001119554.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 14254 14769 . + . ID=gene-C9E93_RS06130;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9E93_RS06130;old_locus_tag=C9E93_06330 NZ_PYJV01000037.1 Protein Homology CDS 14254 14769 . + 0 ID=cds-WP_000716763.1;Parent=gene-C9E93_RS06130;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9E93_RS06130;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 14832 16412 . - . ID=gene-C9E93_RS06135;Name=C9E93_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06135;old_locus_tag=C9E93_06335 NZ_PYJV01000037.1 Protein Homology CDS 14832 16412 . - 0 ID=cds-WP_001089322.1;Parent=gene-C9E93_RS06135;Dbxref=GenBank:WP_001089322.1;Name=WP_001089322.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9E93_RS06135;product=phosphoethanolamine transferase;protein_id=WP_001089322.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 16677 16805 . - . ID=gene-C9E93_RS06140;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9E93_RS06140;old_locus_tag=C9E93_06340 NZ_PYJV01000037.1 Protein Homology CDS 16677 16805 . - 0 ID=cds-WP_001670439.1;Parent=gene-C9E93_RS06140;Dbxref=GenBank:WP_001670439.1;Name=WP_001670439.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9E93_RS06140;product=manganase accumulation protein MntS;protein_id=WP_001670439.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 16991 17464 . + . ID=gene-C9E93_RS06145;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9E93_RS06145;old_locus_tag=C9E93_06345 NZ_PYJV01000037.1 Protein Homology CDS 16991 17464 . + 0 ID=cds-WP_000533542.1;Parent=gene-C9E93_RS06145;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9E93_RS06145;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 17461 18573 . + . ID=gene-C9E93_RS06150;Name=C9E93_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06150;old_locus_tag=C9E93_06350 NZ_PYJV01000037.1 Protein Homology CDS 17461 18573 . + 0 ID=cds-WP_135370519.1;Parent=gene-C9E93_RS06150;Dbxref=GenBank:WP_135370519.1;Name=WP_135370519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=C9E93_RS06150;product=anion transporter;protein_id=WP_135370519.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 18617 19537 . - . ID=gene-C9E93_RS06155;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9E93_RS06155;old_locus_tag=C9E93_06355 NZ_PYJV01000037.1 Protein Homology CDS 18617 19537 . - 0 ID=cds-WP_001056404.1;Parent=gene-C9E93_RS06155;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9E93_RS06155;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_PYJV01000037.1 RefSeq gene 19756 21348 . + . ID=gene-C9E93_RS06160;Name=C9E93_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06160;old_locus_tag=C9E93_06360 NZ_PYJV01000037.1 Protein Homology CDS 19756 21348 . + 0 ID=cds-WP_135370518.1;Parent=gene-C9E93_RS06160;Dbxref=GenBank:WP_135370518.1;Name=WP_135370518.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=C9E93_RS06160;product=ABC-F family ATPase;protein_id=WP_135370518.1;transl_table=11 ##sequence-region NZ_PYJV01000116.1 1 20668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000116.1 RefSeq region 1 20668 . + . ID=NZ_PYJV01000116.1:1..20668;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000116.1 RefSeq gene 193 855 . + . ID=gene-C9E93_RS21100;Name=C9E93_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21100;old_locus_tag=C9E93_21650 NZ_PYJV01000116.1 Protein Homology CDS 193 855 . + 0 ID=cds-WP_020898794.1;Parent=gene-C9E93_RS21100;Dbxref=GenBank:WP_020898794.1;Name=WP_020898794.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9E93_RS21100;product=class I SAM-dependent methyltransferase;protein_id=WP_020898794.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 1126 1656 . - . ID=gene-C9E93_RS21105;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9E93_RS21105;old_locus_tag=C9E93_21655 NZ_PYJV01000116.1 Protein Homology CDS 1126 1656 . - 0 ID=cds-WP_000527277.1;Parent=gene-C9E93_RS21105;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9E93_RS21105;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 1773 2573 . - . ID=gene-C9E93_RS21110;Name=C9E93_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21110;old_locus_tag=C9E93_21660 NZ_PYJV01000116.1 Protein Homology CDS 1773 2573 . - 0 ID=cds-WP_023242334.1;Parent=gene-C9E93_RS21110;Dbxref=GenBank:WP_023242334.1;Name=WP_023242334.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9E93_RS21110;product=YdcF family protein;protein_id=WP_023242334.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 2637 6539 . - . ID=gene-C9E93_RS21115;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9E93_RS21115;old_locus_tag=C9E93_21665 NZ_PYJV01000116.1 Protein Homology CDS 2637 6539 . - 0 ID=cds-WP_115409372.1;Parent=gene-C9E93_RS21115;Dbxref=GenBank:WP_115409372.1;Name=WP_115409372.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9E93_RS21115;product=ATP-dependent RNA helicase HrpA;protein_id=WP_115409372.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 6740 7345 . + . ID=gene-C9E93_RS21120;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9E93_RS21120;old_locus_tag=C9E93_21670 NZ_PYJV01000116.1 Protein Homology CDS 6740 7345 . + 0 ID=cds-WP_000048924.1;Parent=gene-C9E93_RS21120;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9E93_RS21120;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 7342 7791 . - . ID=gene-C9E93_RS21125;Name=C9E93_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21125;old_locus_tag=C9E93_21675 NZ_PYJV01000116.1 Protein Homology CDS 7342 7791 . - 0 ID=cds-WP_001531579.1;Parent=gene-C9E93_RS21125;Dbxref=GenBank:WP_001531579.1;Name=WP_001531579.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=C9E93_RS21125;product=GFA family protein;protein_id=WP_001531579.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 7934 8257 . - . ID=gene-C9E93_RS21130;Name=C9E93_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21130;old_locus_tag=C9E93_21680 NZ_PYJV01000116.1 Protein Homology CDS 7934 8257 . - 0 ID=cds-WP_000760414.1;Parent=gene-C9E93_RS21130;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9E93_RS21130;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 8265 8456 . - . ID=gene-C9E93_RS21135;Name=C9E93_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21135;old_locus_tag=C9E93_21685 NZ_PYJV01000116.1 Protein Homology CDS 8265 8456 . - 0 ID=cds-WP_000784063.1;Parent=gene-C9E93_RS21135;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9E93_RS21135;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 8456 11092 . - . ID=gene-C9E93_RS21140;Name=C9E93_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21140;old_locus_tag=C9E93_21690 NZ_PYJV01000116.1 Protein Homology CDS 8456 11092 . - 0 ID=cds-WP_000677012.1;Parent=gene-C9E93_RS21140;Dbxref=GenBank:WP_000677012.1;Name=WP_000677012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9E93_RS21140;product=YdbH family protein;protein_id=WP_000677012.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 11332 12321 . + . ID=gene-C9E93_RS21145;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9E93_RS21145;old_locus_tag=C9E93_21695 NZ_PYJV01000116.1 Protein Homology CDS 11332 12321 . + 0 ID=cds-WP_000762206.1;Parent=gene-C9E93_RS21145;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9E93_RS21145;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 12432 12842 . + . ID=gene-C9E93_RS21150;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9E93_RS21150;old_locus_tag=C9E93_21700 NZ_PYJV01000116.1 Protein Homology CDS 12432 12842 . + 0 ID=cds-WP_000750316.1;Parent=gene-C9E93_RS21150;Dbxref=GenBank:WP_000750316.1;Name=WP_000750316.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9E93_RS21150;product=heat shock protein HslJ;protein_id=WP_000750316.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 12886 13152 . - . ID=gene-C9E93_RS21155;Name=C9E93_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21155;old_locus_tag=C9E93_21705 NZ_PYJV01000116.1 Protein Homology CDS 12886 13152 . - 0 ID=cds-WP_001200680.1;Parent=gene-C9E93_RS21155;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9E93_RS21155;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 13056 13367 . + . ID=gene-C9E93_RS21160;Name=C9E93_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21160;old_locus_tag=C9E93_21710 NZ_PYJV01000116.1 Protein Homology CDS 13056 13367 . + 0 ID=cds-WP_031609604.1;Parent=gene-C9E93_RS21160;Dbxref=GenBank:WP_031609604.1;Name=WP_031609604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9E93_RS21160;product=hypothetical protein;protein_id=WP_031609604.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 13428 16952 . + . ID=gene-C9E93_RS21165;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9E93_RS21165;old_locus_tag=C9E93_21715 NZ_PYJV01000116.1 Protein Homology CDS 13428 16952 . + 0 ID=cds-WP_135370166.1;Parent=gene-C9E93_RS21165;Dbxref=GenBank:WP_135370166.1;Name=WP_135370166.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9E93_RS21165;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_135370166.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 17434 17868 . + . ID=gene-C9E93_RS21170;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9E93_RS21170;old_locus_tag=C9E93_21725 NZ_PYJV01000116.1 Protein Homology CDS 17434 17868 . + 0 ID=cds-WP_001082296.1;Parent=gene-C9E93_RS21170;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9E93_RS21170;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 17921 18259 . - . ID=gene-C9E93_RS21175;Name=C9E93_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21175;old_locus_tag=C9E93_21730 NZ_PYJV01000116.1 Protein Homology CDS 17921 18259 . - 0 ID=cds-WP_000159242.1;Parent=gene-C9E93_RS21175;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9E93_RS21175;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_PYJV01000116.1 RefSeq gene 18533 20668 . - . ID=gene-C9E93_RS21180;Name=C9E93_RS21180;end_range=20668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21180;old_locus_tag=C9E93_21735;partial=true NZ_PYJV01000116.1 Protein Homology CDS 18533 20668 . - 0 ID=cds-WP_135400642.1;Parent=gene-C9E93_RS21180;Dbxref=GenBank:WP_135400642.1;Name=WP_135400642.1;end_range=20668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9E93_RS21180;partial=true;product=DUF4765 family protein;protein_id=WP_135400642.1;transl_table=11 ##sequence-region NZ_PYJV01000097.1 1 20402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000097.1 RefSeq region 1 20402 . + . ID=NZ_PYJV01000097.1:1..20402;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000097.1 RefSeq pseudogene 1 696 . + . ID=gene-C9E93_RS17700;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=pseudogene;locus_tag=C9E93_RS17700;old_locus_tag=C9E93_18165;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000097.1 Protein Homology CDS 1 696 . + 0 ID=cds-C9E93_RS17700;Parent=gene-C9E93_RS17700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9E93_RS17700;partial=true;product=SPI-4 type I secretion system protein SiiD;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000097.1 RefSeq gene 713 17401 . + . ID=gene-C9E93_RS17705;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=C9E93_RS17705;old_locus_tag=C9E93_18170 NZ_PYJV01000097.1 Protein Homology CDS 713 17401 . + 0 ID=cds-WP_135400628.1;Parent=gene-C9E93_RS17705;Dbxref=GenBank:WP_135400628.1;Name=WP_135400628.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9E93_RS17705;product=non-fimbrial adhesin SiiE;protein_id=WP_135400628.1;transl_table=11 NZ_PYJV01000097.1 RefSeq gene 17441 19507 . + . ID=gene-C9E93_RS17710;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=C9E93_RS17710;old_locus_tag=C9E93_18175 NZ_PYJV01000097.1 Protein Homology CDS 17441 19507 . + 0 ID=cds-WP_000358566.1;Parent=gene-C9E93_RS17710;Dbxref=GenBank:WP_000358566.1;Name=WP_000358566.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9E93_RS17710;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358566.1;transl_table=11 NZ_PYJV01000097.1 RefSeq gene 19785 20066 . - . ID=gene-C9E93_RS17715;Name=C9E93_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS17715;old_locus_tag=C9E93_18180 NZ_PYJV01000097.1 Protein Homology CDS 19785 20066 . - 0 ID=cds-WP_135370660.1;Parent=gene-C9E93_RS17715;Dbxref=GenBank:WP_135370660.1;Name=WP_135370660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9E93_RS17715;product=YjcB family protein;protein_id=WP_135370660.1;transl_table=11 ##sequence-region NZ_PYJV01000082.1 1 19659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000082.1 RefSeq region 1 19659 . + . ID=NZ_PYJV01000082.1:1..19659;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000082.1 RefSeq gene 82 1182 . + . ID=gene-C9E93_RS14370;Name=C9E93_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14370;old_locus_tag=C9E93_14735 NZ_PYJV01000082.1 Protein Homology CDS 82 1182 . + 0 ID=cds-WP_000828048.1;Parent=gene-C9E93_RS14370;Dbxref=GenBank:WP_000828048.1;Name=WP_000828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9E93_RS14370;product=YiiG family protein;protein_id=WP_000828048.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 1257 1955 . - . ID=gene-C9E93_RS14375;Name=C9E93_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14375;old_locus_tag=C9E93_14740 NZ_PYJV01000082.1 Protein Homology CDS 1257 1955 . - 0 ID=cds-WP_135370588.1;Parent=gene-C9E93_RS14375;Dbxref=GenBank:WP_135370588.1;Name=WP_135370588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107397.1;locus_tag=C9E93_RS14375;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_135370588.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 2307 3149 . - . ID=gene-C9E93_RS14380;Name=C9E93_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14380;old_locus_tag=C9E93_14745 NZ_PYJV01000082.1 Protein Homology CDS 2307 3149 . - 0 ID=cds-WP_135370587.1;Parent=gene-C9E93_RS14380;Dbxref=GenBank:WP_135370587.1;Name=WP_135370587.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004116794.1;locus_tag=C9E93_RS14380;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_135370587.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 3142 3942 . - . ID=gene-C9E93_RS14385;Name=C9E93_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14385;old_locus_tag=C9E93_14750 NZ_PYJV01000082.1 Protein Homology CDS 3142 3942 . - 0 ID=cds-WP_135370586.1;Parent=gene-C9E93_RS14385;Dbxref=GenBank:WP_135370586.1;Name=WP_135370586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966534.1;locus_tag=C9E93_RS14385;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_135370586.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 3954 4451 . - . ID=gene-C9E93_RS14390;Name=C9E93_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14390;old_locus_tag=C9E93_14755 NZ_PYJV01000082.1 Protein Homology CDS 3954 4451 . - 0 ID=cds-WP_065357305.1;Parent=gene-C9E93_RS14390;Dbxref=GenBank:WP_065357305.1;Name=WP_065357305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004132852.1;locus_tag=C9E93_RS14390;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_065357305.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 4464 5642 . - . ID=gene-C9E93_RS14395;Name=C9E93_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14395;old_locus_tag=C9E93_14760 NZ_PYJV01000082.1 Protein Homology CDS 4464 5642 . - 0 ID=cds-WP_135370585.1;Parent=gene-C9E93_RS14395;Dbxref=GenBank:WP_135370585.1;Name=WP_135370585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127142.1;locus_tag=C9E93_RS14395;product=glycoside hydrolase family 88 protein;protein_id=WP_135370585.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 5639 6121 . - . ID=gene-C9E93_RS14400;Name=C9E93_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14400;old_locus_tag=C9E93_14765 NZ_PYJV01000082.1 Protein Homology CDS 5639 6121 . - 0 ID=cds-WP_135370584.1;Parent=gene-C9E93_RS14400;Dbxref=GenBank:WP_135370584.1;Name=WP_135370584.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837007.1;locus_tag=C9E93_RS14400;product=PTS sugar transporter subunit IIA;protein_id=WP_135370584.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 6294 8897 . - . ID=gene-C9E93_RS14405;Name=C9E93_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14405;old_locus_tag=C9E93_14770 NZ_PYJV01000082.1 Protein Homology CDS 6294 8897 . - 0 ID=cds-WP_135370583.1;Parent=gene-C9E93_RS14405;Dbxref=GenBank:WP_135370583.1;Name=WP_135370583.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966530.1;locus_tag=C9E93_RS14405;product=sigma 54-interacting transcriptional regulator;protein_id=WP_135370583.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 9141 9464 . - . ID=gene-C9E93_RS14410;Name=C9E93_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14410;old_locus_tag=C9E93_14775 NZ_PYJV01000082.1 Protein Homology CDS 9141 9464 . - 0 ID=cds-WP_108638945.1;Parent=gene-C9E93_RS14410;Dbxref=GenBank:WP_108638945.1;Name=WP_108638945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9E93_RS14410;product=AzlD domain-containing protein;protein_id=WP_108638945.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 9464 10123 . - . ID=gene-C9E93_RS14415;Name=C9E93_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14415;old_locus_tag=C9E93_14780 NZ_PYJV01000082.1 Protein Homology CDS 9464 10123 . - 0 ID=cds-WP_000683586.1;Parent=gene-C9E93_RS14415;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9E93_RS14415;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 10224 10772 . + . ID=gene-C9E93_RS14420;Name=C9E93_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14420;old_locus_tag=C9E93_14785 NZ_PYJV01000082.1 Protein Homology CDS 10224 10772 . + 0 ID=cds-WP_001517951.1;Parent=gene-C9E93_RS14420;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9E93_RS14420;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 10861 11175 . - . ID=gene-C9E93_RS14425;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9E93_RS14425;old_locus_tag=C9E93_14790 NZ_PYJV01000082.1 Protein Homology CDS 10861 11175 . - 0 ID=cds-WP_000619478.1;Parent=gene-C9E93_RS14425;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9E93_RS14425;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 11172 12320 . - . ID=gene-C9E93_RS14430;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E93_RS14430;old_locus_tag=C9E93_14795 NZ_PYJV01000082.1 Protein Homology CDS 11172 12320 . - 0 ID=cds-WP_000009253.1;Parent=gene-C9E93_RS14430;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9E93_RS14430;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 12447 13274 . - . ID=gene-C9E93_RS14435;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9E93_RS14435;old_locus_tag=C9E93_14800 NZ_PYJV01000082.1 Protein Homology CDS 12447 13274 . - 0 ID=cds-WP_023261625.1;Parent=gene-C9E93_RS14435;Dbxref=GenBank:WP_023261625.1;Name=WP_023261625.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9E93_RS14435;product=rhamnulose-1-phosphate aldolase;protein_id=WP_023261625.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 13417 14676 . - . ID=gene-C9E93_RS14440;Name=C9E93_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS14440;old_locus_tag=C9E93_14805 NZ_PYJV01000082.1 Protein Homology CDS 13417 14676 . - 0 ID=cds-WP_000211469.1;Parent=gene-C9E93_RS14440;Dbxref=GenBank:WP_000211469.1;Name=WP_000211469.1;Ontology_term=GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9E93_RS14440;product=L-rhamnose isomerase;protein_id=WP_000211469.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 14673 16142 . - . ID=gene-C9E93_RS14445;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9E93_RS14445;old_locus_tag=C9E93_14810 NZ_PYJV01000082.1 Protein Homology CDS 14673 16142 . - 0 ID=cds-WP_001621393.1;Parent=gene-C9E93_RS14445;Dbxref=GenBank:WP_001621393.1;Name=WP_001621393.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9E93_RS14445;product=rhamnulokinase;protein_id=WP_001621393.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 16430 17266 . + . ID=gene-C9E93_RS14450;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9E93_RS14450;old_locus_tag=C9E93_14815 NZ_PYJV01000082.1 Protein Homology CDS 16430 17266 . + 0 ID=cds-WP_114064421.1;Parent=gene-C9E93_RS14450;Dbxref=GenBank:WP_114064421.1;Name=WP_114064421.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9E93_RS14450;product=HTH-type transcriptional activator RhaS;protein_id=WP_114064421.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 17419 18267 . + . ID=gene-C9E93_RS14455;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9E93_RS14455;old_locus_tag=C9E93_14825 NZ_PYJV01000082.1 Protein Homology CDS 17419 18267 . + 0 ID=cds-WP_079951466.1;Parent=gene-C9E93_RS14455;Dbxref=GenBank:WP_079951466.1;Name=WP_079951466.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9E93_RS14455;product=HTH-type transcriptional activator RhaR;protein_id=WP_079951466.1;transl_table=11 NZ_PYJV01000082.1 RefSeq gene 18264 19298 . - . ID=gene-C9E93_RS14460;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9E93_RS14460;old_locus_tag=C9E93_14830 NZ_PYJV01000082.1 Protein Homology CDS 18264 19298 . - 0 ID=cds-WP_000063541.1;Parent=gene-C9E93_RS14460;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9E93_RS14460;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 ##sequence-region NZ_PYJV01000007.1 1 19549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000007.1 RefSeq region 1 19549 . + . ID=NZ_PYJV01000007.1:1..19549;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000007.1 RefSeq pseudogene 1 139 . - . ID=gene-C9E93_RS00190;Name=C9E93_RS00190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00190;old_locus_tag=C9E93_00210;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000007.1 Protein Homology CDS 1 139 . - 0 ID=cds-C9E93_RS00190;Parent=gene-C9E93_RS00190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E93_RS00190;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 189 1514 . + . ID=gene-C9E93_RS00195;Name=C9E93_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00195;old_locus_tag=C9E93_00215 NZ_PYJV01000007.1 Protein Homology CDS 189 1514 . + 0 ID=cds-WP_135370292.1;Parent=gene-C9E93_RS00195;Dbxref=GenBank:WP_135370292.1;Name=WP_135370292.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9E93_RS00195;product=MFS transporter;protein_id=WP_135370292.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 1529 2731 . + . ID=gene-C9E93_RS00200;Name=C9E93_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00200;old_locus_tag=C9E93_00220 NZ_PYJV01000007.1 Protein Homology CDS 1529 2731 . + 0 ID=cds-WP_000705581.1;Parent=gene-C9E93_RS00200;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9E93_RS00200;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 3141 5777 . + . ID=gene-C9E93_RS00205;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9E93_RS00205;old_locus_tag=C9E93_00230 NZ_PYJV01000007.1 Protein Homology CDS 3141 5777 . + 0 ID=cds-WP_023237365.1;Parent=gene-C9E93_RS00205;Dbxref=GenBank:WP_023237365.1;Name=WP_023237365.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9E93_RS00205;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_023237365.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 5895 8741 . + . ID=gene-C9E93_RS00210;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=C9E93_RS00210;old_locus_tag=C9E93_00235 NZ_PYJV01000007.1 Protein Homology CDS 5895 8741 . + 0 ID=cds-WP_000876086.1;Parent=gene-C9E93_RS00210;Dbxref=GenBank:WP_000876086.1;Name=WP_000876086.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9E93_RS00210;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876086.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 8845 9495 . - . ID=gene-C9E93_RS00215;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9E93_RS00215;old_locus_tag=C9E93_00240 NZ_PYJV01000007.1 Protein Homology CDS 8845 9495 . - 0 ID=cds-WP_001061919.1;Parent=gene-C9E93_RS00215;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9E93_RS00215;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 9512 12181 . - . ID=gene-C9E93_RS00220;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9E93_RS00220;old_locus_tag=C9E93_00245 NZ_PYJV01000007.1 Protein Homology CDS 9512 12181 . - 0 ID=cds-WP_000083201.1;Parent=gene-C9E93_RS00220;Dbxref=GenBank:WP_000083201.1;Name=WP_000083201.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9E93_RS00220;product=phosphotransferase RcsD;protein_id=WP_000083201.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 12910 14046 . + . ID=gene-C9E93_RS00225;Name=C9E93_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00225;old_locus_tag=C9E93_00255 NZ_PYJV01000007.1 Protein Homology CDS 12910 14046 . + 0 ID=cds-WP_000865521.1;Parent=gene-C9E93_RS00225;Dbxref=GenBank:WP_000865521.1;Name=WP_000865521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9E93_RS00225;product=porin OmpC;protein_id=WP_000865521.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 14161 15213 . + . ID=gene-C9E93_RS00230;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9E93_RS00230;old_locus_tag=C9E93_00260 NZ_PYJV01000007.1 Protein Homology CDS 14161 15213 . + 0 ID=cds-WP_135370412.1;Parent=gene-C9E93_RS00230;Dbxref=GenBank:WP_135370412.1;Name=WP_135370412.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9E93_RS00230;product=FAD:protein FMN transferase ApbE;protein_id=WP_135370412.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 15294 16355 . + . ID=gene-C9E93_RS00235;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9E93_RS00235;old_locus_tag=C9E93_00265 NZ_PYJV01000007.1 Protein Homology CDS 15294 16355 . + 0 ID=cds-WP_000975970.1;Parent=gene-C9E93_RS00235;Dbxref=GenBank:WP_000975970.1;Name=WP_000975970.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9E93_RS00235;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975970.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 16358 17008 . + . ID=gene-C9E93_RS00240;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=C9E93_RS00240;old_locus_tag=C9E93_00270 NZ_PYJV01000007.1 Protein Homology CDS 16358 17008 . + 0 ID=cds-WP_135370411.1;Parent=gene-C9E93_RS00240;Dbxref=GenBank:WP_135370411.1;Name=WP_135370411.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9E93_RS00240;product=DNA oxidative demethylase AlkB;protein_id=WP_135370411.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 17084 18727 . + . ID=gene-C9E93_RS00245;Name=C9E93_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00245;old_locus_tag=C9E93_00275 NZ_PYJV01000007.1 Protein Homology CDS 17084 18727 . + 0 ID=cds-WP_000421584.1;Parent=gene-C9E93_RS00245;Dbxref=GenBank:WP_000421584.1;Name=WP_000421584.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9E93_RS00245;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421584.1;transl_table=11 NZ_PYJV01000007.1 RefSeq gene 18936 19430 . - . ID=gene-C9E93_RS00250;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9E93_RS00250;old_locus_tag=C9E93_00280 NZ_PYJV01000007.1 Protein Homology CDS 18936 19430 . - 0 ID=cds-WP_000781589.1;Parent=gene-C9E93_RS00250;Dbxref=GenBank:WP_000781589.1;Name=WP_000781589.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9E93_RS00250;product=serine protease inhibitor ecotin;protein_id=WP_000781589.1;transl_table=11 ##sequence-region NZ_PYJV01000068.1 1 19471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000068.1 RefSeq region 1 19471 . + . ID=NZ_PYJV01000068.1:1..19471;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000068.1 RefSeq gene 1 1741 . - . ID=gene-C9E93_RS10845;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9E93_RS10845;old_locus_tag=C9E93_11125;partial=true;start_range=.,1 NZ_PYJV01000068.1 Protein Homology CDS 1 1741 . - 0 ID=cds-WP_135400612.1;Parent=gene-C9E93_RS10845;Dbxref=GenBank:WP_135400612.1;Name=WP_135400612.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9E93_RS10845;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_135400612.1;start_range=.,1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 1734 2312 . - . ID=gene-C9E93_RS10850;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9E93_RS10850;old_locus_tag=C9E93_11130 NZ_PYJV01000068.1 Protein Homology CDS 1734 2312 . - 0 ID=cds-WP_001092597.1;Parent=gene-C9E93_RS10850;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9E93_RS10850;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 2312 2893 . - . ID=gene-C9E93_RS10855;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9E93_RS10855;old_locus_tag=C9E93_11135 NZ_PYJV01000068.1 Protein Homology CDS 2312 2893 . - 0 ID=cds-WP_000133179.1;Parent=gene-C9E93_RS10855;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9E93_RS10855;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 2970 3410 . - . ID=gene-C9E93_RS10860;Name=C9E93_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10860;old_locus_tag=C9E93_11140 NZ_PYJV01000068.1 Protein Homology CDS 2970 3410 . - 0 ID=cds-WP_000214061.1;Parent=gene-C9E93_RS10860;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9E93_RS10860;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 3499 3714 . - . ID=gene-C9E93_RS10865;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9E93_RS10865;old_locus_tag=C9E93_11145 NZ_PYJV01000068.1 Protein Homology CDS 3499 3714 . - 0 ID=cds-WP_000217946.1;Parent=gene-C9E93_RS10865;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9E93_RS10865;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 4012 4137 . - . ID=gene-C9E93_RS10870;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9E93_RS10870;old_locus_tag=C9E93_11150 NZ_PYJV01000068.1 Protein Homology CDS 4012 4137 . - 0 ID=cds-WP_001708800.1;Parent=gene-C9E93_RS10870;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9E93_RS10870;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 4345 5385 . + . ID=gene-C9E93_RS10875;Name=C9E93_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10875;old_locus_tag=C9E93_11155 NZ_PYJV01000068.1 Protein Homology CDS 4345 5385 . + 0 ID=cds-WP_000998242.1;Parent=gene-C9E93_RS10875;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9E93_RS10875;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 5459 6460 . - . ID=gene-C9E93_RS10880;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9E93_RS10880;old_locus_tag=C9E93_11160 NZ_PYJV01000068.1 Protein Homology CDS 5459 6460 . - 0 ID=cds-WP_135370259.1;Parent=gene-C9E93_RS10880;Dbxref=GenBank:WP_135370259.1;Name=WP_135370259.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565557.1;locus_tag=C9E93_RS10880;product=adenosine deaminase;protein_id=WP_135370259.1;transl_table=11 NZ_PYJV01000068.1 RefSeq pseudogene 6678 7052 . - . ID=gene-C9E93_RS10885;Name=C9E93_RS10885;end_range=7052,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS10885;old_locus_tag=C9E93_11165;partial=true;pseudo=true NZ_PYJV01000068.1 Protein Homology CDS 6678 7052 . - 0 ID=cds-C9E93_RS10885;Parent=gene-C9E93_RS10885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030170;end_range=7052,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=C9E93_RS10885;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_PYJV01000068.1 RefSeq pseudogene 7071 7673 . + . ID=gene-C9E93_RS10890;Name=malI;gbkey=Gene;gene=malI;gene_biotype=pseudogene;locus_tag=C9E93_RS10890;old_locus_tag=C9E93_11170;partial=true;pseudo=true;start_range=.,7071 NZ_PYJV01000068.1 Protein Homology CDS 7071 7673 . + 0 ID=cds-C9E93_RS10890;Parent=gene-C9E93_RS10890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=C9E93_RS10890;partial=true;product=Mal regulon transcriptional regulator MalI;pseudo=true;start_range=.,7071;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 7731 9239 . - . ID=gene-C9E93_RS10895;Name=C9E93_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10895;old_locus_tag=C9E93_11175 NZ_PYJV01000068.1 Protein Homology CDS 7731 9239 . - 0 ID=cds-WP_000753334.1;Parent=gene-C9E93_RS10895;Dbxref=GenBank:WP_000753334.1;Name=WP_000753334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9E93_RS10895;product=YdgA family protein;protein_id=WP_000753334.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 9342 10517 . - . ID=gene-C9E93_RS10900;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9E93_RS10900;old_locus_tag=C9E93_11180 NZ_PYJV01000068.1 Protein Homology CDS 9342 10517 . - 0 ID=cds-WP_001170623.1;Parent=gene-C9E93_RS10900;Dbxref=GenBank:WP_001170623.1;Name=WP_001170623.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9E93_RS10900;product=mannose-6-phosphate isomerase;protein_id=WP_001170623.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 10717 12363 . + . ID=gene-C9E93_RS10905;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9E93_RS10905;old_locus_tag=C9E93_11185 NZ_PYJV01000068.1 Protein Homology CDS 10717 12363 . + 0 ID=cds-WP_000066609.1;Parent=gene-C9E93_RS10905;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9E93_RS10905;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 12531 13934 . + . ID=gene-C9E93_RS10910;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9E93_RS10910;old_locus_tag=C9E93_11190 NZ_PYJV01000068.1 Protein Homology CDS 12531 13934 . + 0 ID=cds-WP_023993247.1;Parent=gene-C9E93_RS10910;Dbxref=GenBank:WP_023993247.1;Name=WP_023993247.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9E93_RS10910;product=class II fumarate hydratase;protein_id=WP_023993247.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 13931 14860 . - . ID=gene-C9E93_RS10915;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9E93_RS10915;old_locus_tag=C9E93_11195 NZ_PYJV01000068.1 Protein Homology CDS 13931 14860 . - 0 ID=cds-WP_080203984.1;Parent=gene-C9E93_RS10915;Dbxref=GenBank:WP_080203984.1;Name=WP_080203984.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9E93_RS10915;product=DNA replication terminus site-binding protein;protein_id=WP_080203984.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 14936 16237 . - . ID=gene-C9E93_RS10920;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9E93_RS10920;old_locus_tag=C9E93_11200 NZ_PYJV01000068.1 Protein Homology CDS 14936 16237 . - 0 ID=cds-WP_080203983.1;Parent=gene-C9E93_RS10920;Dbxref=GenBank:WP_080203983.1;Name=WP_080203983.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9E93_RS10920;product=two-component system sensor histidine kinase RstB;protein_id=WP_080203983.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 16348 18054 . - . ID=gene-C9E93_RS10925;Name=C9E93_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS10925;old_locus_tag=C9E93_11205 NZ_PYJV01000068.1 Protein Homology CDS 16348 18054 . - 0 ID=cds-WP_135370260.1;Parent=gene-C9E93_RS10925;Dbxref=GenBank:WP_135370260.1;Name=WP_135370260.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9E93_RS10925;product=amidohydrolase;protein_id=WP_135370260.1;transl_table=11 NZ_PYJV01000068.1 RefSeq gene 18207 19352 . - . ID=gene-C9E93_RS10930;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9E93_RS10930;old_locus_tag=C9E93_11210 NZ_PYJV01000068.1 Protein Homology CDS 18207 19352 . - 0 ID=cds-WP_135370261.1;Parent=gene-C9E93_RS10930;Dbxref=GenBank:WP_135370261.1;Name=WP_135370261.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9E93_RS10930;product=porin OmpS2;protein_id=WP_135370261.1;transl_table=11 ##sequence-region NZ_PYJV01000117.1 1 118435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000117.1 RefSeq region 1 118435 . + . ID=NZ_PYJV01000117.1:1..118435;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000117.1 RefSeq gene 549 1535 . + . ID=gene-C9E93_RS21185;Name=C9E93_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21185;old_locus_tag=C9E93_21740 NZ_PYJV01000117.1 Protein Homology CDS 549 1535 . + 0 ID=cds-WP_135369929.1;Parent=gene-C9E93_RS21185;Dbxref=GenBank:WP_135369929.1;Name=WP_135369929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9E93_RS21185;product=IS110 family transposase;protein_id=WP_135369929.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 1673 2128 . + . ID=gene-C9E93_RS21190;Name=C9E93_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21190;old_locus_tag=C9E93_21745 NZ_PYJV01000117.1 Protein Homology CDS 1673 2128 . + 0 ID=cds-WP_135369930.1;Parent=gene-C9E93_RS21190;Dbxref=GenBank:WP_135369930.1;Name=WP_135369930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9E93_RS21190;product=DUF4385 domain-containing protein;protein_id=WP_135369930.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 2232 3533 . + . ID=gene-C9E93_RS21195;Name=C9E93_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21195;old_locus_tag=C9E93_21750 NZ_PYJV01000117.1 Protein Homology CDS 2232 3533 . + 0 ID=cds-WP_000807818.1;Parent=gene-C9E93_RS21195;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9E93_RS21195;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 3530 3853 . - . ID=gene-C9E93_RS21200;Name=C9E93_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21200;old_locus_tag=C9E93_21755 NZ_PYJV01000117.1 Protein Homology CDS 3530 3853 . - 0 ID=cds-WP_001264478.1;Parent=gene-C9E93_RS21200;Dbxref=GenBank:WP_001264478.1;Name=WP_001264478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9E93_RS21200;product=YfiM family lipoprotein;protein_id=WP_001264478.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 3898 5253 . - . ID=gene-C9E93_RS21205;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9E93_RS21205;old_locus_tag=C9E93_21760 NZ_PYJV01000117.1 Protein Homology CDS 3898 5253 . - 0 ID=cds-WP_000949286.1;Parent=gene-C9E93_RS21205;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9E93_RS21205;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 5368 8028 . - . ID=gene-C9E93_RS21210;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9E93_RS21210;old_locus_tag=C9E93_21765 NZ_PYJV01000117.1 Protein Homology CDS 5368 8028 . - 0 ID=cds-WP_000082643.1;Parent=gene-C9E93_RS21210;Dbxref=GenBank:WP_000082643.1;Name=WP_000082643.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9E93_RS21210;product=protein lysine acetyltransferase;protein_id=WP_000082643.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 8082 8762 . - . ID=gene-C9E93_RS21215;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9E93_RS21215;old_locus_tag=C9E93_21770 NZ_PYJV01000117.1 Protein Homology CDS 8082 8762 . - 0 ID=cds-WP_000183647.1;Parent=gene-C9E93_RS21215;Dbxref=GenBank:WP_000183647.1;Name=WP_000183647.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9E93_RS21215;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183647.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 8835 9254 . - . ID=gene-C9E93_RS21220;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9E93_RS21220;old_locus_tag=C9E93_21775 NZ_PYJV01000117.1 Protein Homology CDS 8835 9254 . - 0 ID=cds-WP_001098732.1;Parent=gene-C9E93_RS21220;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9E93_RS21220;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 9458 10495 . + . ID=gene-C9E93_RS21225;Name=C9E93_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21225;old_locus_tag=C9E93_21780 NZ_PYJV01000117.1 Protein Homology CDS 9458 10495 . + 0 ID=cds-WP_135369931.1;Parent=gene-C9E93_RS21225;Dbxref=GenBank:WP_135369931.1;Name=WP_135369931.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9E93_RS21225;product=tRNA/rRNA methyltransferase;protein_id=WP_135369931.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 10611 11300 . - . ID=gene-C9E93_RS21230;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9E93_RS21230;old_locus_tag=C9E93_21785 NZ_PYJV01000117.1 Protein Homology CDS 10611 11300 . - 0 ID=cds-WP_000179978.1;Parent=gene-C9E93_RS21230;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9E93_RS21230;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 11619 12002 . + . ID=gene-C9E93_RS21235;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9E93_RS21235;old_locus_tag=C9E93_21790 NZ_PYJV01000117.1 Protein Homology CDS 11619 12002 . + 0 ID=cds-WP_000627811.1;Parent=gene-C9E93_RS21235;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9E93_RS21235;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 12064 12651 . - . ID=gene-C9E93_RS21240;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9E93_RS21240;old_locus_tag=C9E93_21795 NZ_PYJV01000117.1 Protein Homology CDS 12064 12651 . - 0 ID=cds-WP_000188414.1;Parent=gene-C9E93_RS21240;Dbxref=GenBank:WP_000188414.1;Name=WP_000188414.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9E93_RS21240;product=cysteine/O-acetylserine transporter;protein_id=WP_000188414.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 12754 13653 . + . ID=gene-C9E93_RS21245;Name=C9E93_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21245;old_locus_tag=C9E93_21800 NZ_PYJV01000117.1 Protein Homology CDS 12754 13653 . + 0 ID=cds-WP_023245307.1;Parent=gene-C9E93_RS21245;Dbxref=GenBank:WP_023245307.1;Name=WP_023245307.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9E93_RS21245;product=LysR family transcriptional regulator;protein_id=WP_023245307.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 13671 15005 . - . ID=gene-C9E93_RS21250;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9E93_RS21250;old_locus_tag=C9E93_21805 NZ_PYJV01000117.1 Protein Homology CDS 13671 15005 . - 0 ID=cds-WP_000219174.1;Parent=gene-C9E93_RS21250;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9E93_RS21250;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_PYJV01000117.1 RefSeq pseudogene 15135 15872 . + . ID=gene-C9E93_RS21255;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=pseudogene;locus_tag=C9E93_RS21255;old_locus_tag=C9E93_21810;pseudo=true NZ_PYJV01000117.1 Protein Homology CDS 15135 15872 . + 0 ID=cds-C9E93_RS21255;Parent=gene-C9E93_RS21255;Note=internal stop;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9E93_RS21255;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;pseudo=true;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 15857 17479 . - . ID=gene-C9E93_RS21260;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9E93_RS21260;old_locus_tag=C9E93_21815 NZ_PYJV01000117.1 Protein Homology CDS 15857 17479 . - 0 ID=cds-WP_000989186.1;Parent=gene-C9E93_RS21260;Dbxref=GenBank:WP_000989186.1;Name=WP_000989186.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9E93_RS21260;product=L-aspartate oxidase;protein_id=WP_000989186.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 17743 17907 . + . ID=gene-C9E93_RS21270;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9E93_RS21270 NZ_PYJV01000117.1 Protein Homology CDS 17743 17907 . + 0 ID=cds-WP_014344135.1;Parent=gene-C9E93_RS21270;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=C9E93_RS21270;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 17904 18479 . + . ID=gene-C9E93_RS21275;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9E93_RS21275;old_locus_tag=C9E93_21825 NZ_PYJV01000117.1 Protein Homology CDS 17904 18479 . + 0 ID=cds-WP_000003307.1;Parent=gene-C9E93_RS21275;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9E93_RS21275;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 18511 19161 . + . ID=gene-C9E93_RS21280;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9E93_RS21280;old_locus_tag=C9E93_21830 NZ_PYJV01000117.1 Protein Homology CDS 18511 19161 . + 0 ID=cds-WP_001168374.1;Parent=gene-C9E93_RS21280;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9E93_RS21280;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 19161 20117 . + . ID=gene-C9E93_RS21285;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9E93_RS21285;old_locus_tag=C9E93_21835 NZ_PYJV01000117.1 Protein Homology CDS 19161 20117 . + 0 ID=cds-WP_023201326.1;Parent=gene-C9E93_RS21285;Dbxref=GenBank:WP_023201326.1;Name=WP_023201326.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9E93_RS21285;product=sigma-E factor regulatory protein RseB;protein_id=WP_023201326.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 20114 20593 . + . ID=gene-C9E93_RS21290;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9E93_RS21290;old_locus_tag=C9E93_21840 NZ_PYJV01000117.1 Protein Homology CDS 20114 20593 . + 0 ID=cds-WP_000589049.1;Parent=gene-C9E93_RS21290;Dbxref=GenBank:WP_000589049.1;Name=WP_000589049.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9E93_RS21290;product=SoxR-reducing system protein RseC;protein_id=WP_000589049.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 20845 22644 . + . ID=gene-C9E93_RS21300;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9E93_RS21300;old_locus_tag=C9E93_21850 NZ_PYJV01000117.1 Protein Homology CDS 20845 22644 . + 0 ID=cds-WP_000790154.1;Parent=gene-C9E93_RS21300;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9E93_RS21300;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 22661 23635 . + . ID=gene-C9E93_RS21305;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9E93_RS21305;old_locus_tag=C9E93_21855 NZ_PYJV01000117.1 Protein Homology CDS 22661 23635 . + 0 ID=cds-WP_023262191.1;Parent=gene-C9E93_RS21305;Dbxref=GenBank:WP_023262191.1;Name=WP_023262191.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9E93_RS21305;product=signal peptidase I;protein_id=WP_023262191.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 23909 24589 . + . ID=gene-C9E93_RS21310;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9E93_RS21310;old_locus_tag=C9E93_21865 NZ_PYJV01000117.1 Protein Homology CDS 23909 24589 . + 0 ID=cds-WP_001068341.1;Parent=gene-C9E93_RS21310;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9E93_RS21310;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 24586 25491 . + . ID=gene-C9E93_RS21315;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9E93_RS21315;old_locus_tag=C9E93_21870 NZ_PYJV01000117.1 Protein Homology CDS 24586 25491 . + 0 ID=cds-WP_000102230.1;Parent=gene-C9E93_RS21315;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9E93_RS21315;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 25503 26231 . + . ID=gene-C9E93_RS21320;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9E93_RS21320;old_locus_tag=C9E93_21875 NZ_PYJV01000117.1 Protein Homology CDS 25503 26231 . + 0 ID=cds-WP_000399380.1;Parent=gene-C9E93_RS21320;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9E93_RS21320;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 26243 26974 . + . ID=gene-C9E93_RS21325;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9E93_RS21325;old_locus_tag=C9E93_21880 NZ_PYJV01000117.1 Protein Homology CDS 26243 26974 . + 0 ID=cds-WP_000818964.1;Parent=gene-C9E93_RS21325;Dbxref=GenBank:WP_000818964.1;Name=WP_000818964.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9E93_RS21325;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818964.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 26974 27354 . + . ID=gene-C9E93_RS21330;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9E93_RS21330;old_locus_tag=C9E93_21885 NZ_PYJV01000117.1 Protein Homology CDS 26974 27354 . + 0 ID=cds-WP_000986043.1;Parent=gene-C9E93_RS21330;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9E93_RS21330;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 27466 27726 . - . ID=gene-C9E93_RS21335;Name=C9E93_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21335;old_locus_tag=C9E93_21890 NZ_PYJV01000117.1 Protein Homology CDS 27466 27726 . - 0 ID=cds-WP_001196290.1;Parent=gene-C9E93_RS21335;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9E93_RS21335;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 27764 28690 . - . ID=gene-C9E93_RS21340;Name=C9E93_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21340;old_locus_tag=C9E93_21895 NZ_PYJV01000117.1 Protein Homology CDS 27764 28690 . - 0 ID=cds-WP_001022463.1;Parent=gene-C9E93_RS21340;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9E93_RS21340;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 28806 30002 . + . ID=gene-C9E93_RS21345;Name=C9E93_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21345;old_locus_tag=C9E93_21900 NZ_PYJV01000117.1 Protein Homology CDS 28806 30002 . + 0 ID=cds-WP_001276364.1;Parent=gene-C9E93_RS21345;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9E93_RS21345;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 30024 30941 . + . ID=gene-C9E93_RS21350;Name=C9E93_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21350;old_locus_tag=C9E93_21905 NZ_PYJV01000117.1 Protein Homology CDS 30024 30941 . + 0 ID=cds-WP_023259212.1;Parent=gene-C9E93_RS21350;Dbxref=GenBank:WP_023259212.1;Name=WP_023259212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9E93_RS21350;product=oxidoreductase;protein_id=WP_023259212.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 30980 31828 . - . ID=gene-C9E93_RS21355;Name=C9E93_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21355;old_locus_tag=C9E93_21910 NZ_PYJV01000117.1 Protein Homology CDS 30980 31828 . - 0 ID=cds-WP_000995692.1;Parent=gene-C9E93_RS21355;Dbxref=GenBank:WP_000995692.1;Name=WP_000995692.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9E93_RS21355;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995692.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 31944 32837 . + . ID=gene-C9E93_RS21360;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9E93_RS21360;old_locus_tag=C9E93_21915 NZ_PYJV01000117.1 Protein Homology CDS 31944 32837 . + 0 ID=cds-WP_001048531.1;Parent=gene-C9E93_RS21360;Dbxref=GenBank:WP_001048531.1;Name=WP_001048531.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9E93_RS21360;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048531.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 32848 34209 . + . ID=gene-C9E93_RS21365;Name=C9E93_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21365;old_locus_tag=C9E93_21920 NZ_PYJV01000117.1 Protein Homology CDS 32848 34209 . + 0 ID=cds-WP_000361660.1;Parent=gene-C9E93_RS21365;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9E93_RS21365;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 34213 34848 . + . ID=gene-C9E93_RS21370;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=C9E93_RS21370;old_locus_tag=C9E93_21925 NZ_PYJV01000117.1 Protein Homology CDS 34213 34848 . + 0 ID=cds-WP_000253558.1;Parent=gene-C9E93_RS21370;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9E93_RS21370;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 34873 35424 . + . ID=gene-C9E93_RS21375;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9E93_RS21375;old_locus_tag=C9E93_21930 NZ_PYJV01000117.1 Protein Homology CDS 34873 35424 . + 0 ID=cds-WP_135370015.1;Parent=gene-C9E93_RS21375;Dbxref=GenBank:WP_135370015.1;Name=WP_135370015.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9E93_RS21375;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_135370015.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 35475 37019 . - . ID=gene-C9E93_RS21380;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9E93_RS21380;old_locus_tag=C9E93_21935 NZ_PYJV01000117.1 Protein Homology CDS 35475 37019 . - 0 ID=cds-WP_135370014.1;Parent=gene-C9E93_RS21380;Dbxref=GenBank:WP_135370014.1;Name=WP_135370014.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9E93_RS21380;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_135370014.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 37020 37250 . - . ID=gene-C9E93_RS21385;Name=C9E93_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21385;old_locus_tag=C9E93_21940 NZ_PYJV01000117.1 Protein Homology CDS 37020 37250 . - 0 ID=cds-WP_001667771.1;Parent=gene-C9E93_RS21385;Dbxref=GenBank:WP_001667771.1;Name=WP_001667771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9E93_RS21385;product=hypothetical protein;protein_id=WP_001667771.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 37275 41162 . + . ID=gene-C9E93_RS21390;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9E93_RS21390;old_locus_tag=C9E93_21945 NZ_PYJV01000117.1 Protein Homology CDS 37275 41162 . + 0 ID=cds-WP_135370175.1;Parent=gene-C9E93_RS21390;Dbxref=GenBank:WP_135370175.1;Name=WP_135370175.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9E93_RS21390;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_135370175.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 41667 43097 . + . ID=gene-C9E93_RS21395;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9E93_RS21395;old_locus_tag=C9E93_21950 NZ_PYJV01000117.1 Protein Homology CDS 41667 43097 . + 0 ID=cds-WP_001676035.1;Parent=gene-C9E93_RS21395;Dbxref=GenBank:WP_001676035.1;Name=WP_001676035.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9E93_RS21395;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001676035.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 43099 43863 . + . ID=gene-C9E93_RS21400;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9E93_RS21400;old_locus_tag=C9E93_21955 NZ_PYJV01000117.1 Protein Homology CDS 43099 43863 . + 0 ID=cds-WP_001054239.1;Parent=gene-C9E93_RS21400;Dbxref=GenBank:WP_001054239.1;Name=WP_001054239.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9E93_RS21400;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054239.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 43863 45197 . + . ID=gene-C9E93_RS21405;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9E93_RS21405;old_locus_tag=C9E93_21960 NZ_PYJV01000117.1 Protein Homology CDS 43863 45197 . + 0 ID=cds-WP_024131115.1;Parent=gene-C9E93_RS21405;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=C9E93_RS21405;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 45274 45612 . + . ID=gene-C9E93_RS21410;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9E93_RS21410;old_locus_tag=C9E93_21965 NZ_PYJV01000117.1 Protein Homology CDS 45274 45612 . + 0 ID=cds-WP_000717694.1;Parent=gene-C9E93_RS21410;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9E93_RS21410;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 45661 47121 . - . ID=gene-C9E93_RS21415;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=C9E93_RS21415;old_locus_tag=C9E93_21970 NZ_PYJV01000117.1 Protein Homology CDS 45661 47121 . - 0 ID=cds-WP_000856793.1;Parent=gene-C9E93_RS21415;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9E93_RS21415;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 47177 49321 . - . ID=gene-C9E93_RS21420;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9E93_RS21420;old_locus_tag=C9E93_21975 NZ_PYJV01000117.1 Protein Homology CDS 47177 49321 . - 0 ID=cds-WP_001100652.1;Parent=gene-C9E93_RS21420;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9E93_RS21420;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 49404 50735 . - . ID=gene-C9E93_RS21425;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9E93_RS21425;old_locus_tag=C9E93_21980 NZ_PYJV01000117.1 Protein Homology CDS 49404 50735 . - 0 ID=cds-WP_000100008.1;Parent=gene-C9E93_RS21425;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9E93_RS21425;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 51096 52640 . - . ID=gene-C9E93_RS21430;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9E93_RS21430;old_locus_tag=C9E93_21985 NZ_PYJV01000117.1 Protein Homology CDS 51096 52640 . - 0 ID=cds-WP_080163564.1;Parent=gene-C9E93_RS21430;Dbxref=GenBank:WP_080163564.1;Name=WP_080163564.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9E93_RS21430;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_080163564.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 52822 54012 . - . ID=gene-C9E93_RS21435;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9E93_RS21435;old_locus_tag=C9E93_21990 NZ_PYJV01000117.1 Protein Homology CDS 52822 54012 . - 0 ID=cds-WP_000883146.1;Parent=gene-C9E93_RS21435;Dbxref=GenBank:WP_000883146.1;Name=WP_000883146.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9E93_RS21435;product=NO-inducible flavohemoprotein;protein_id=WP_000883146.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 54337 55590 . + . ID=gene-C9E93_RS21440;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C9E93_RS21440;old_locus_tag=C9E93_21995 NZ_PYJV01000117.1 Protein Homology CDS 54337 55590 . + 0 ID=cds-WP_000919178.1;Parent=gene-C9E93_RS21440;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9E93_RS21440;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 55786 56925 . + . ID=gene-C9E93_RS21445;Name=C9E93_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21445;old_locus_tag=C9E93_22000 NZ_PYJV01000117.1 Protein Homology CDS 55786 56925 . + 0 ID=cds-WP_001173729.1;Parent=gene-C9E93_RS21445;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9E93_RS21445;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 56920 58197 . - . ID=gene-C9E93_RS21450;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9E93_RS21450;old_locus_tag=C9E93_22005 NZ_PYJV01000117.1 Protein Homology CDS 56920 58197 . - 0 ID=cds-WP_135370601.1;Parent=gene-C9E93_RS21450;Dbxref=GenBank:WP_135370601.1;Name=WP_135370601.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9E93_RS21450;product=stationary phase inducible protein CsiE;protein_id=WP_135370601.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 58323 58961 . + . ID=gene-C9E93_RS21455;Name=C9E93_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21455;old_locus_tag=C9E93_22010 NZ_PYJV01000117.1 Protein Homology CDS 58323 58961 . + 0 ID=cds-WP_000805728.1;Parent=gene-C9E93_RS21455;Dbxref=GenBank:WP_000805728.1;Name=WP_000805728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9E93_RS21455;product=DUF1007 family protein;protein_id=WP_000805728.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 58952 59938 . + . ID=gene-C9E93_RS21460;Name=C9E93_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21460;old_locus_tag=C9E93_22015 NZ_PYJV01000117.1 Protein Homology CDS 58952 59938 . + 0 ID=cds-WP_023993587.1;Parent=gene-C9E93_RS21460;Dbxref=GenBank:WP_023993587.1;Name=WP_023993587.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9E93_RS21460;product=nickel/cobalt transporter;protein_id=WP_023993587.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 59939 60952 . - . ID=gene-C9E93_RS21465;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9E93_RS21465;old_locus_tag=C9E93_22020 NZ_PYJV01000117.1 Protein Homology CDS 59939 60952 . - 0 ID=cds-WP_023993588.1;Parent=gene-C9E93_RS21465;Dbxref=GenBank:WP_023993588.1;Name=WP_023993588.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9E93_RS21465;product=sulfite reductase subunit C;protein_id=WP_023993588.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 60963 61781 . - . ID=gene-C9E93_RS21470;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9E93_RS21470;old_locus_tag=C9E93_22025 NZ_PYJV01000117.1 Protein Homology CDS 60963 61781 . - 0 ID=cds-WP_000017587.1;Parent=gene-C9E93_RS21470;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9E93_RS21470;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 61785 62828 . - . ID=gene-C9E93_RS21475;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=C9E93_RS21475;old_locus_tag=C9E93_22030 NZ_PYJV01000117.1 Protein Homology CDS 61785 62828 . - 0 ID=cds-WP_000985204.1;Parent=gene-C9E93_RS21475;Dbxref=GenBank:WP_000985204.1;Name=WP_000985204.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9E93_RS21475;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985204.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 63010 63888 . - . ID=gene-C9E93_RS21480;Name=C9E93_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21480;old_locus_tag=C9E93_22035 NZ_PYJV01000117.1 Protein Homology CDS 63010 63888 . - 0 ID=cds-WP_023993589.1;Parent=gene-C9E93_RS21480;Dbxref=GenBank:WP_023993589.1;Name=WP_023993589.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9E93_RS21480;product=alpha/beta hydrolase;protein_id=WP_023993589.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 64033 64836 . - . ID=gene-C9E93_RS21485;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9E93_RS21485;old_locus_tag=C9E93_22040 NZ_PYJV01000117.1 Protein Homology CDS 64033 64836 . - 0 ID=cds-WP_000553473.1;Parent=gene-C9E93_RS21485;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9E93_RS21485;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 64955 65686 . + . ID=gene-C9E93_RS21490;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=C9E93_RS21490;old_locus_tag=C9E93_22045 NZ_PYJV01000117.1 Protein Homology CDS 64955 65686 . + 0 ID=cds-WP_000940032.1;Parent=gene-C9E93_RS21490;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9E93_RS21490;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 65846 66340 . + . ID=gene-C9E93_RS21495;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9E93_RS21495;old_locus_tag=C9E93_22050 NZ_PYJV01000117.1 Protein Homology CDS 65846 66340 . + 0 ID=cds-WP_001241346.1;Parent=gene-C9E93_RS21495;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9E93_RS21495;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 66521 67735 . + . ID=gene-C9E93_RS21500;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9E93_RS21500;old_locus_tag=C9E93_22055 NZ_PYJV01000117.1 Protein Homology CDS 66521 67735 . + 0 ID=cds-WP_000775263.1;Parent=gene-C9E93_RS21500;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9E93_RS21500;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 67763 68149 . + . ID=gene-C9E93_RS21505;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9E93_RS21505;old_locus_tag=C9E93_22060 NZ_PYJV01000117.1 Protein Homology CDS 67763 68149 . + 0 ID=cds-WP_000331704.1;Parent=gene-C9E93_RS21505;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9E93_RS21505;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 68178 68501 . + . ID=gene-C9E93_RS21510;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9E93_RS21510;old_locus_tag=C9E93_22065 NZ_PYJV01000117.1 Protein Homology CDS 68178 68501 . + 0 ID=cds-WP_000028952.1;Parent=gene-C9E93_RS21510;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9E93_RS21510;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 68697 69212 . + . ID=gene-C9E93_RS21515;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9E93_RS21515;old_locus_tag=C9E93_22070 NZ_PYJV01000117.1 Protein Homology CDS 68697 69212 . + 0 ID=cds-WP_000384398.1;Parent=gene-C9E93_RS21515;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9E93_RS21515;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 69225 71075 . + . ID=gene-C9E93_RS21520;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9E93_RS21520;old_locus_tag=C9E93_22075 NZ_PYJV01000117.1 Protein Homology CDS 69225 71075 . + 0 ID=cds-WP_001196653.1;Parent=gene-C9E93_RS21520;Dbxref=GenBank:WP_001196653.1;Name=WP_001196653.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9E93_RS21520;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196653.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 71077 71412 . + . ID=gene-C9E93_RS21525;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9E93_RS21525;old_locus_tag=C9E93_22080 NZ_PYJV01000117.1 Protein Homology CDS 71077 71412 . + 0 ID=cds-WP_001124466.1;Parent=gene-C9E93_RS21525;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9E93_RS21525;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 71424 71624 . + . ID=gene-C9E93_RS21530;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9E93_RS21530;old_locus_tag=C9E93_22085 NZ_PYJV01000117.1 Protein Homology CDS 71424 71624 . + 0 ID=cds-WP_000523621.1;Parent=gene-C9E93_RS21530;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9E93_RS21530;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 71871 73154 . + . ID=gene-C9E93_RS21535;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9E93_RS21535;old_locus_tag=C9E93_22095 NZ_PYJV01000117.1 Protein Homology CDS 71871 73154 . + 0 ID=cds-WP_000133536.1;Parent=gene-C9E93_RS21535;Dbxref=GenBank:WP_000133536.1;Name=WP_000133536.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9E93_RS21535;product=aminopeptidase PepB;protein_id=WP_000133536.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 73264 74040 . + . ID=gene-C9E93_RS21540;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E93_RS21540;old_locus_tag=C9E93_22105 NZ_PYJV01000117.1 Protein Homology CDS 73264 74040 . + 0 ID=cds-WP_001533245.1;Parent=gene-C9E93_RS21540;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9E93_RS21540;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 74077 74193 . - . ID=gene-C9E93_RS24100;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=C9E93_RS24100 NZ_PYJV01000117.1 Protein Homology CDS 74077 74193 . - 0 ID=cds-WP_350028759.1;Parent=gene-C9E93_RS24100;Dbxref=GenBank:WP_350028759.1;Name=WP_350028759.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=C9E93_RS24100;product=small toxic inner membrane protein TimP;protein_id=WP_350028759.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 74609 75277 . - . ID=gene-C9E93_RS21550;Name=C9E93_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21550;old_locus_tag=C9E93_22115 NZ_PYJV01000117.1 Protein Homology CDS 74609 75277 . - 0 ID=cds-WP_023993592.1;Parent=gene-C9E93_RS21550;Dbxref=GenBank:WP_023993592.1;Name=WP_023993592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9E93_RS21550;product=DUF5066 family protein;protein_id=WP_023993592.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 75319 75543 . + . ID=gene-C9E93_RS23635;Name=C9E93_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23635;old_locus_tag=C9E93_22120 NZ_PYJV01000117.1 Protein Homology CDS 75319 75543 . + 0 ID=cds-WP_001535525.1;Parent=gene-C9E93_RS23635;Dbxref=GenBank:WP_001535525.1;Name=WP_001535525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9E93_RS23635;product=hypothetical protein;protein_id=WP_001535525.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 75523 76365 . - . ID=gene-C9E93_RS21555;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E93_RS21555;old_locus_tag=C9E93_22125 NZ_PYJV01000117.1 Protein Homology CDS 75523 76365 . - 0 ID=cds-WP_000205241.1;Parent=gene-C9E93_RS21555;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9E93_RS21555;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 76574 81508 . + . ID=gene-C9E93_RS21560;Name=C9E93_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21560;old_locus_tag=C9E93_22130 NZ_PYJV01000117.1 Protein Homology CDS 76574 81508 . + 0 ID=cds-WP_135370597.1;Parent=gene-C9E93_RS21560;Dbxref=GenBank:WP_135370597.1;Name=WP_135370597.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9E93_RS21560;product=alpha-2-macroglobulin family protein;protein_id=WP_135370597.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 81509 83824 . + . ID=gene-C9E93_RS21565;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9E93_RS21565;old_locus_tag=C9E93_22135 NZ_PYJV01000117.1 Protein Homology CDS 81509 83824 . + 0 ID=cds-WP_039585517.1;Parent=gene-C9E93_RS21565;Dbxref=GenBank:WP_039585517.1;Name=WP_039585517.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9E93_RS21565;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_039585517.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 83980 86358 . + . ID=gene-C9E93_RS21570;Name=C9E93_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21570;old_locus_tag=C9E93_22140 NZ_PYJV01000117.1 Protein Homology CDS 83980 86358 . + 0 ID=cds-WP_023227903.1;Parent=gene-C9E93_RS21570;Dbxref=GenBank:WP_023227903.1;Name=WP_023227903.1;Ontology_term=GO:0009061,GO:0009055,GO:0009389,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=C9E93_RS21570;product=DmsA/YnfE/YnfF family dimethyl sulfoxide reductase;protein_id=WP_023227903.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 86355 86984 . + . ID=gene-C9E93_RS21575;Name=C9E93_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21575;old_locus_tag=C9E93_22145 NZ_PYJV01000117.1 Protein Homology CDS 86355 86984 . + 0 ID=cds-WP_000077436.1;Parent=gene-C9E93_RS21575;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9E93_RS21575;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 86977 87786 . + . ID=gene-C9E93_RS21580;Name=C9E93_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21580;old_locus_tag=C9E93_22150 NZ_PYJV01000117.1 Protein Homology CDS 86977 87786 . + 0 ID=cds-WP_135370187.1;Parent=gene-C9E93_RS21580;Dbxref=GenBank:WP_135370187.1;Name=WP_135370187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9E93_RS21580;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135370187.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 87786 88649 . + . ID=gene-C9E93_RS21585;Name=C9E93_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21585;old_locus_tag=C9E93_22155 NZ_PYJV01000117.1 Protein Homology CDS 87786 88649 . + 0 ID=cds-WP_023994422.1;Parent=gene-C9E93_RS21585;Dbxref=GenBank:WP_023994422.1;Name=WP_023994422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9E93_RS21585;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_023994422.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 88770 89201 . + . ID=gene-C9E93_RS21590;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9E93_RS21590;old_locus_tag=C9E93_22160 NZ_PYJV01000117.1 Protein Homology CDS 88770 89201 . + 0 ID=cds-WP_000963846.1;Parent=gene-C9E93_RS21590;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9E93_RS21590;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 89408 90574 . + . ID=gene-C9E93_RS21595;Name=C9E93_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21595;old_locus_tag=C9E93_22165 NZ_PYJV01000117.1 Protein Homology CDS 89408 90574 . + 0 ID=cds-WP_000003206.1;Parent=gene-C9E93_RS21595;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9E93_RS21595;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 90866 91882 . + . ID=gene-C9E93_RS21600;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9E93_RS21600;old_locus_tag=C9E93_22175 NZ_PYJV01000117.1 Protein Homology CDS 90866 91882 . + 0 ID=cds-WP_023260373.1;Parent=gene-C9E93_RS21600;Dbxref=GenBank:WP_023260373.1;Name=WP_023260373.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9E93_RS21600;product=cytoskeleton protein RodZ;protein_id=WP_023260373.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 91909 93027 . + . ID=gene-C9E93_RS21605;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9E93_RS21605;old_locus_tag=C9E93_22180 NZ_PYJV01000117.1 Protein Homology CDS 91909 93027 . + 0 ID=cds-WP_000551804.1;Parent=gene-C9E93_RS21605;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9E93_RS21605;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 93138 94412 . + . ID=gene-C9E93_RS21610;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9E93_RS21610;old_locus_tag=C9E93_22185 NZ_PYJV01000117.1 Protein Homology CDS 93138 94412 . + 0 ID=cds-WP_001107146.1;Parent=gene-C9E93_RS21610;Dbxref=GenBank:WP_001107146.1;Name=WP_001107146.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9E93_RS21610;product=histidine--tRNA ligase;protein_id=WP_001107146.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 94426 95046 . + . ID=gene-C9E93_RS21615;Name=C9E93_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21615;old_locus_tag=C9E93_22190 NZ_PYJV01000117.1 Protein Homology CDS 94426 95046 . + 0 ID=cds-WP_000409190.1;Parent=gene-C9E93_RS21615;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9E93_RS21615;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 95057 96235 . + . ID=gene-C9E93_RS21620;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9E93_RS21620;old_locus_tag=C9E93_22195 NZ_PYJV01000117.1 Protein Homology CDS 95057 96235 . + 0 ID=cds-WP_001177072.1;Parent=gene-C9E93_RS21620;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9E93_RS21620;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 96354 97826 . + . ID=gene-C9E93_RS21625;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9E93_RS21625;old_locus_tag=C9E93_22200 NZ_PYJV01000117.1 Protein Homology CDS 96354 97826 . + 0 ID=cds-WP_000249411.1;Parent=gene-C9E93_RS21625;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9E93_RS21625;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 97915 98136 . + . ID=gene-C9E93_RS21630;Name=C9E93_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21630;old_locus_tag=C9E93_22205 NZ_PYJV01000117.1 Protein Homology CDS 97915 98136 . + 0 ID=cds-WP_000406466.1;Parent=gene-C9E93_RS21630;Dbxref=GenBank:WP_000406466.1;Name=WP_000406466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9E93_RS21630;product=zinc ribbon domain-containing protein;protein_id=WP_000406466.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 98482 100674 . + . ID=gene-C9E93_RS21635;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9E93_RS21635;old_locus_tag=C9E93_22210 NZ_PYJV01000117.1 Protein Homology CDS 98482 100674 . + 0 ID=cds-WP_000252220.1;Parent=gene-C9E93_RS21635;Dbxref=GenBank:WP_000252220.1;Name=WP_000252220.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9E93_RS21635;product=intimin-like inverse autotransporter SinH;protein_id=WP_000252220.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 100732 101703 . + . ID=gene-C9E93_RS21640;Name=C9E93_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21640;old_locus_tag=C9E93_22215 NZ_PYJV01000117.1 Protein Homology CDS 100732 101703 . + 0 ID=cds-WP_135370157.1;Parent=gene-C9E93_RS21640;Dbxref=GenBank:WP_135370157.1;Name=WP_135370157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9E93_RS21640;product=SinI family autotransporter-associated protein;protein_id=WP_135370157.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 101823 107426 . + . ID=gene-C9E93_RS21645;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=C9E93_RS21645;old_locus_tag=C9E93_22220 NZ_PYJV01000117.1 Protein Homology CDS 101823 107426 . + 0 ID=cds-WP_135370156.1;Parent=gene-C9E93_RS21645;Dbxref=GenBank:WP_135370156.1;Name=WP_135370156.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9E93_RS21645;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_135370156.1;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 107592 114902 . + . ID=gene-C9E93_RS21650;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=C9E93_RS21650;old_locus_tag=C9E93_22225 NZ_PYJV01000117.1 Protein Homology CDS 107592 114902 . + 0 ID=cds-WP_135370155.1;Parent=gene-C9E93_RS21650;Dbxref=GenBank:WP_135370155.1;Name=WP_135370155.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9E93_RS21650;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_135370155.1;transl_table=11 NZ_PYJV01000117.1 RefSeq pseudogene 114917 115003 . + . ID=gene-C9E93_RS21655;Name=C9E93_RS21655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS21655;old_locus_tag=C9E93_22230;partial=true;pseudo=true;start_range=.,114917 NZ_PYJV01000117.1 Protein Homology CDS 114917 115003 . + 0 ID=cds-C9E93_RS21655;Parent=gene-C9E93_RS21655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=C9E93_RS21655;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,114917;transl_table=11 NZ_PYJV01000117.1 RefSeq gene 115563 118435 . + . ID=gene-C9E93_RS21660;Name=C9E93_RS21660;end_range=118435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21660;old_locus_tag=C9E93_22235;partial=true NZ_PYJV01000117.1 Protein Homology CDS 115563 118435 . + 0 ID=cds-WP_217810217.1;Parent=gene-C9E93_RS21660;Dbxref=GenBank:WP_217810217.1;Name=WP_217810217.1;end_range=118435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9E93_RS21660;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_217810217.1;transl_table=11 ##sequence-region NZ_PYJV01000012.1 1 17776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000012.1 RefSeq region 1 17776 . + . ID=NZ_PYJV01000012.1:1..17776;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000012.1 RefSeq gene 134 865 . - . ID=gene-C9E93_RS00750;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9E93_RS00750;old_locus_tag=C9E93_00810 NZ_PYJV01000012.1 Protein Homology CDS 134 865 . - 0 ID=cds-WP_001293274.1;Parent=gene-C9E93_RS00750;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9E93_RS00750;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 956 3394 . - . ID=gene-C9E93_RS00755;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9E93_RS00755;old_locus_tag=C9E93_00815 NZ_PYJV01000012.1 Protein Homology CDS 956 3394 . - 0 ID=cds-WP_000076357.1;Parent=gene-C9E93_RS00755;Dbxref=GenBank:WP_000076357.1;Name=WP_000076357.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9E93_RS00755;product=ribonuclease R;protein_id=WP_000076357.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 3432 3857 . - . ID=gene-C9E93_RS00760;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9E93_RS00760;old_locus_tag=C9E93_00820 NZ_PYJV01000012.1 Protein Homology CDS 3432 3857 . - 0 ID=cds-WP_001177632.1;Parent=gene-C9E93_RS00760;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9E93_RS00760;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 4065 5363 . - . ID=gene-C9E93_RS00765;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9E93_RS00765;old_locus_tag=C9E93_00825 NZ_PYJV01000012.1 Protein Homology CDS 4065 5363 . - 0 ID=cds-WP_000527972.1;Parent=gene-C9E93_RS00765;Dbxref=GenBank:WP_000527972.1;Name=WP_000527972.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9E93_RS00765;product=adenylosuccinate synthase;protein_id=WP_000527972.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 5466 5663 . - . ID=gene-C9E93_RS00770;Name=C9E93_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00770;old_locus_tag=C9E93_00830 NZ_PYJV01000012.1 Protein Homology CDS 5466 5663 . - 0 ID=cds-WP_001089290.1;Parent=gene-C9E93_RS00770;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9E93_RS00770;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 5742 6746 . - . ID=gene-C9E93_RS00775;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9E93_RS00775;old_locus_tag=C9E93_00835 NZ_PYJV01000012.1 Protein Homology CDS 5742 6746 . - 0 ID=cds-WP_001232417.1;Parent=gene-C9E93_RS00775;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9E93_RS00775;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 6749 8008 . - . ID=gene-C9E93_RS00780;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9E93_RS00780;old_locus_tag=C9E93_00840 NZ_PYJV01000012.1 Protein Homology CDS 6749 8008 . - 0 ID=cds-WP_000312505.1;Parent=gene-C9E93_RS00780;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9E93_RS00780;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 8223 9503 . - . ID=gene-C9E93_RS00785;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9E93_RS00785;old_locus_tag=C9E93_00845 NZ_PYJV01000012.1 Protein Homology CDS 8223 9503 . - 0 ID=cds-WP_000460338.1;Parent=gene-C9E93_RS00785;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9E93_RS00785;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 9575 9883 . - . ID=gene-C9E93_RS00790;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9E93_RS00790;old_locus_tag=C9E93_00850 NZ_PYJV01000012.1 Protein Homology CDS 9575 9883 . - 0 ID=cds-WP_001051875.1;Parent=gene-C9E93_RS00790;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9E93_RS00790;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 9966 10916 . - . ID=gene-C9E93_RS00795;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9E93_RS00795;old_locus_tag=C9E93_00855 NZ_PYJV01000012.1 Protein Homology CDS 9966 10916 . - 0 ID=cds-WP_001000734.1;Parent=gene-C9E93_RS00795;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9E93_RS00795;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 10909 12765 . - . ID=gene-C9E93_RS00800;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=C9E93_RS00800;old_locus_tag=C9E93_00860 NZ_PYJV01000012.1 Protein Homology CDS 10909 12765 . - 0 ID=cds-WP_094965158.1;Parent=gene-C9E93_RS00800;Dbxref=GenBank:WP_094965158.1;Name=WP_094965158.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9E93_RS00800;product=DNA mismatch repair endonuclease MutL;protein_id=WP_094965158.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 12775 14097 . - . ID=gene-C9E93_RS00805;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9E93_RS00805;old_locus_tag=C9E93_00865 NZ_PYJV01000012.1 Protein Homology CDS 12775 14097 . - 0 ID=cds-WP_135370620.1;Parent=gene-C9E93_RS00805;Dbxref=GenBank:WP_135370620.1;Name=WP_135370620.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9E93_RS00805;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_135370620.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 14114 14575 . - . ID=gene-C9E93_RS00810;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9E93_RS00810;old_locus_tag=C9E93_00870 NZ_PYJV01000012.1 Protein Homology CDS 14114 14575 . - 0 ID=cds-WP_000981984.1;Parent=gene-C9E93_RS00810;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9E93_RS00810;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 14547 16094 . - . ID=gene-C9E93_RS00815;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9E93_RS00815;old_locus_tag=C9E93_00875 NZ_PYJV01000012.1 Protein Homology CDS 14547 16094 . - 0 ID=cds-WP_000968670.1;Parent=gene-C9E93_RS00815;Dbxref=GenBank:WP_000968670.1;Name=WP_000968670.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9E93_RS00815;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968670.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 16093 17232 . + . ID=gene-C9E93_RS00820;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9E93_RS00820;old_locus_tag=C9E93_00880 NZ_PYJV01000012.1 Protein Homology CDS 16093 17232 . + 0 ID=cds-WP_001615111.1;Parent=gene-C9E93_RS00820;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9E93_RS00820;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 NZ_PYJV01000012.1 RefSeq gene 17502 17577 . - . ID=gene-C9E93_RS00825;Name=C9E93_RS00825;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00825;old_locus_tag=C9E93_00885 NZ_PYJV01000012.1 tRNAscan-SE tRNA 17502 17577 . - . ID=rna-C9E93_RS00825;Parent=gene-C9E93_RS00825;anticodon=(pos:complement(17542..17544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00825;product=tRNA-Gly NZ_PYJV01000012.1 tRNAscan-SE exon 17502 17577 . - . ID=exon-C9E93_RS00825-1;Parent=rna-C9E93_RS00825;anticodon=(pos:complement(17542..17544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00825;product=tRNA-Gly ##sequence-region NZ_PYJV01000077.1 1 17657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000077.1 RefSeq region 1 17657 . + . ID=NZ_PYJV01000077.1:1..17657;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000077.1 RefSeq pseudogene 1 198 . + . ID=gene-C9E93_RS23745;Name=C9E93_RS23745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23745;old_locus_tag=C9E93_13355;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000077.1 Protein Homology CDS 1 198 . + 0 ID=cds-C9E93_RS23745;Parent=gene-C9E93_RS23745;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875616.1;locus_tag=C9E93_RS23745;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 244 567 . - . ID=gene-C9E93_RS13035;Name=C9E93_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13035;old_locus_tag=C9E93_13360 NZ_PYJV01000077.1 Protein Homology CDS 244 567 . - 0 ID=cds-WP_135370537.1;Parent=gene-C9E93_RS13035;Dbxref=GenBank:WP_135370537.1;Name=WP_135370537.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9E93_RS13035;product=SymE family type I addiction module toxin;protein_id=WP_135370537.1;transl_table=11 NZ_PYJV01000077.1 RefSeq pseudogene 558 3083 . + . ID=gene-C9E93_RS13040;Name=C9E93_RS13040;end_range=3083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13040;old_locus_tag=C9E93_13365;partial=true;pseudo=true;start_range=.,558 NZ_PYJV01000077.1 Protein Homology CDS 558 3083 . + 0 ID=cds-C9E93_RS13040;Parent=gene-C9E93_RS13040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539107.1;locus_tag=C9E93_RS13040;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,558;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 3427 3933 . + . ID=gene-C9E93_RS13045;Name=C9E93_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13045;old_locus_tag=C9E93_13370 NZ_PYJV01000077.1 Protein Homology CDS 3427 3933 . + 0 ID=cds-WP_000472591.1;Parent=gene-C9E93_RS13045;Dbxref=GenBank:WP_000472591.1;Name=WP_000472591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472591.1;locus_tag=C9E93_RS13045;product=hypothetical protein;protein_id=WP_000472591.1;transl_table=11 NZ_PYJV01000077.1 RefSeq pseudogene 3996 4469 . + . ID=gene-C9E93_RS13050;Name=C9E93_RS13050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13050;old_locus_tag=C9E93_13375;partial=true;pseudo=true;start_range=.,3996 NZ_PYJV01000077.1 Protein Homology CDS 3996 4469 . + 0 ID=cds-C9E93_RS13050;Parent=gene-C9E93_RS13050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272651.1;locus_tag=C9E93_RS13050;partial=true;product=polymorphic toxin type 47 domain-containing protein;pseudo=true;start_range=.,3996;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 4463 4909 . + . ID=gene-C9E93_RS13055;Name=sciX;gbkey=Gene;gene=sciX;gene_biotype=protein_coding;locus_tag=C9E93_RS13055;old_locus_tag=C9E93_13380 NZ_PYJV01000077.1 Protein Homology CDS 4463 4909 . + 0 ID=cds-WP_000935097.1;Parent=gene-C9E93_RS13055;Dbxref=GenBank:WP_000935097.1;Name=WP_000935097.1;gbkey=CDS;gene=sciX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459291.1;locus_tag=C9E93_RS13055;product=protein SciX;protein_id=WP_000935097.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 5428 5910 . + . ID=gene-C9E93_RS13060;Name=C9E93_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13060;old_locus_tag=C9E93_13385 NZ_PYJV01000077.1 Protein Homology CDS 5428 5910 . + 0 ID=cds-WP_135400619.1;Parent=gene-C9E93_RS13060;Dbxref=GenBank:WP_135400619.1;Name=WP_135400619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120036.1;locus_tag=C9E93_RS13060;product=Imm26 family immunity protein;protein_id=WP_135400619.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 5966 6271 . - . ID=gene-C9E93_RS13065;Name=C9E93_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13065;old_locus_tag=C9E93_13390 NZ_PYJV01000077.1 Protein Homology CDS 5966 6271 . - 0 ID=cds-WP_135370525.1;Parent=gene-C9E93_RS13065;Dbxref=GenBank:WP_135370525.1;Name=WP_135370525.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9E93_RS13065;product=SymE family type I addiction module toxin;protein_id=WP_135370525.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 6324 6521 . + . ID=gene-C9E93_RS24205;Name=C9E93_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24205 NZ_PYJV01000077.1 Protein Homology CDS 6324 6521 . + 0 ID=cds-WP_001224072.1;Parent=gene-C9E93_RS24205;Dbxref=GenBank:WP_001224072.1;Name=WP_001224072.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9E93_RS24205;product=transposase;protein_id=WP_001224072.1;transl_table=11 NZ_PYJV01000077.1 RefSeq pseudogene 6455 7025 . + . ID=gene-C9E93_RS13070;Name=C9E93_RS13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13070;old_locus_tag=C9E93_13395;partial=true;pseudo=true;start_range=.,6455 NZ_PYJV01000077.1 Protein Homology CDS 6455 7025 . + 0 ID=cds-C9E93_RS13070;Parent=gene-C9E93_RS13070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=C9E93_RS13070;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,6455;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 7793 8287 . + . ID=gene-C9E93_RS13075;Name=C9E93_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13075;old_locus_tag=C9E93_13400 NZ_PYJV01000077.1 Protein Homology CDS 7793 8287 . + 0 ID=cds-WP_127173012.1;Parent=gene-C9E93_RS13075;Dbxref=GenBank:WP_127173012.1;Name=WP_127173012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789624.1;locus_tag=C9E93_RS13075;product=hypothetical protein;protein_id=WP_127173012.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 8420 8917 . + . ID=gene-C9E93_RS13080;Name=C9E93_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13080;old_locus_tag=C9E93_13405 NZ_PYJV01000077.1 Protein Homology CDS 8420 8917 . + 0 ID=cds-WP_023209685.1;Parent=gene-C9E93_RS13080;Dbxref=GenBank:WP_023209685.1;Name=WP_023209685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9E93_RS13080;product=Saf-pilin pilus formation protein SafA;protein_id=WP_023209685.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 8992 9732 . + . ID=gene-C9E93_RS13085;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9E93_RS13085;old_locus_tag=C9E93_13410 NZ_PYJV01000077.1 Protein Homology CDS 8992 9732 . + 0 ID=cds-WP_051129375.1;Parent=gene-C9E93_RS13085;Dbxref=GenBank:WP_051129375.1;Name=WP_051129375.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9E93_RS13085;product=pili assembly chaperone SafB;protein_id=WP_051129375.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 9756 12266 . + . ID=gene-C9E93_RS13090;Name=C9E93_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13090;old_locus_tag=C9E93_13415 NZ_PYJV01000077.1 Protein Homology CDS 9756 12266 . + 0 ID=cds-WP_135370059.1;Parent=gene-C9E93_RS13090;Dbxref=GenBank:WP_135370059.1;Name=WP_135370059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9E93_RS13090;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135370059.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 12288 12758 . + . ID=gene-C9E93_RS13095;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9E93_RS13095;old_locus_tag=C9E93_13420 NZ_PYJV01000077.1 Protein Homology CDS 12288 12758 . + 0 ID=cds-WP_000266939.1;Parent=gene-C9E93_RS13095;Dbxref=GenBank:WP_000266939.1;Name=WP_000266939.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=C9E93_RS13095;product=AfaD family invasin;protein_id=WP_000266939.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 13166 13987 . + . ID=gene-C9E93_RS13100;Name=C9E93_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13100;old_locus_tag=C9E93_13425 NZ_PYJV01000077.1 Protein Homology CDS 13166 13987 . + 0 ID=cds-WP_135370060.1;Parent=gene-C9E93_RS13100;Dbxref=GenBank:WP_135370060.1;Name=WP_135370060.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9E93_RS13100;product=polysaccharide deacetylase family protein;protein_id=WP_135370060.1;transl_table=11 NZ_PYJV01000077.1 RefSeq pseudogene 14070 14307 . + . ID=gene-C9E93_RS13105;Name=C9E93_RS13105;end_range=14307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS13105;old_locus_tag=C9E93_13430;partial=true;pseudo=true NZ_PYJV01000077.1 Protein Homology CDS 14070 14307 . + 0 ID=cds-C9E93_RS13105;Parent=gene-C9E93_RS13105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9E93_RS13105;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 14804 15751 . + . ID=gene-C9E93_RS13110;Name=C9E93_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13110;old_locus_tag=C9E93_13435 NZ_PYJV01000077.1 Protein Homology CDS 14804 15751 . + 0 ID=cds-WP_000970302.1;Parent=gene-C9E93_RS13110;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9E93_RS13110;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 15871 16086 . + . ID=gene-C9E93_RS13115;Name=C9E93_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13115;old_locus_tag=C9E93_13440 NZ_PYJV01000077.1 Protein Homology CDS 15871 16086 . + 0 ID=cds-WP_001521596.1;Parent=gene-C9E93_RS13115;Dbxref=GenBank:WP_001521596.1;Name=WP_001521596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9E93_RS13115;product=hypothetical protein;protein_id=WP_001521596.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 16090 16809 . - . ID=gene-C9E93_RS13120;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9E93_RS13120;old_locus_tag=C9E93_13445 NZ_PYJV01000077.1 Protein Homology CDS 16090 16809 . - 0 ID=cds-WP_135370061.1;Parent=gene-C9E93_RS13120;Dbxref=GenBank:WP_135370061.1;Name=WP_135370061.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9E93_RS13120;product=adhesin/invasin protein PagN;protein_id=WP_135370061.1;transl_table=11 NZ_PYJV01000077.1 RefSeq gene 17134 17541 . - . ID=gene-C9E93_RS13125;Name=C9E93_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13125;old_locus_tag=C9E93_13450 NZ_PYJV01000077.1 Protein Homology CDS 17134 17541 . - 0 ID=cds-WP_001622793.1;Parent=gene-C9E93_RS13125;Dbxref=GenBank:WP_001622793.1;Name=WP_001622793.1;Ontology_term=GO:0006457,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9E93_RS13125;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_001622793.1;transl_table=11 ##sequence-region NZ_PYJV01000054.1 1 17137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000054.1 RefSeq region 1 17137 . + . ID=NZ_PYJV01000054.1:1..17137;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000054.1 RefSeq gene 184 288 . + . ID=gene-C9E93_RS08180;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9E93_RS08180 NZ_PYJV01000054.1 Protein Homology CDS 184 288 . + 0 ID=cds-WP_015632840.1;Parent=gene-C9E93_RS08180;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9E93_RS08180;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 668 2866 . + . ID=gene-C9E93_RS08185;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9E93_RS08185;old_locus_tag=C9E93_08410 NZ_PYJV01000054.1 Protein Homology CDS 668 2866 . + 0 ID=cds-WP_001292402.1;Parent=gene-C9E93_RS08185;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9E93_RS08185;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 2863 4182 . + . ID=gene-C9E93_RS08190;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9E93_RS08190;old_locus_tag=C9E93_08415 NZ_PYJV01000054.1 Protein Homology CDS 2863 4182 . + 0 ID=cds-WP_000042658.1;Parent=gene-C9E93_RS08190;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9E93_RS08190;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 4247 4732 . + . ID=gene-C9E93_RS08195;Name=C9E93_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS08195;old_locus_tag=C9E93_08420 NZ_PYJV01000054.1 Protein Homology CDS 4247 4732 . + 0 ID=cds-WP_079942214.1;Parent=gene-C9E93_RS08195;Dbxref=GenBank:WP_079942214.1;Name=WP_079942214.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9E93_RS08195;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_079942214.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 4847 6487 . - . ID=gene-C9E93_RS08200;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9E93_RS08200;old_locus_tag=C9E93_08425 NZ_PYJV01000054.1 Protein Homology CDS 4847 6487 . - 0 ID=cds-WP_000974385.1;Parent=gene-C9E93_RS08200;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9E93_RS08200;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 6512 7054 . - . ID=gene-C9E93_RS08205;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9E93_RS08205;old_locus_tag=C9E93_08430 NZ_PYJV01000054.1 Protein Homology CDS 6512 7054 . - 0 ID=cds-WP_000848395.1;Parent=gene-C9E93_RS08205;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9E93_RS08205;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 7239 8009 . + . ID=gene-C9E93_RS08210;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9E93_RS08210;old_locus_tag=C9E93_08435 NZ_PYJV01000054.1 Protein Homology CDS 7239 8009 . + 0 ID=cds-WP_000773245.1;Parent=gene-C9E93_RS08210;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9E93_RS08210;product=esterase;protein_id=WP_000773245.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 8143 8436 . + . ID=gene-C9E93_RS08215;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9E93_RS08215;old_locus_tag=C9E93_08440 NZ_PYJV01000054.1 Protein Homology CDS 8143 8436 . + 0 ID=cds-WP_135369935.1;Parent=gene-C9E93_RS08215;Dbxref=GenBank:WP_135369935.1;Name=WP_135369935.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9E93_RS08215;product=LexA regulated protein;protein_id=WP_135369935.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 8587 9117 . + . ID=gene-C9E93_RS08220;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9E93_RS08220;old_locus_tag=C9E93_08445 NZ_PYJV01000054.1 Protein Homology CDS 8587 9117 . + 0 ID=cds-WP_001018621.1;Parent=gene-C9E93_RS08220;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9E93_RS08220;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_PYJV01000054.1 RefSeq pseudogene 9321 9406 . + . ID=gene-C9E93_RS23690;Name=C9E93_RS23690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23690;pseudo=true NZ_PYJV01000054.1 Protein Homology CDS 9321 9406 . + 0 ID=cds-C9E93_RS23690;Parent=gene-C9E93_RS23690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9E93_RS23690;product=fur leader peptide;pseudo=true;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 9399 9851 . + . ID=gene-C9E93_RS08225;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9E93_RS08225;old_locus_tag=C9E93_08450 NZ_PYJV01000054.1 Protein Homology CDS 9399 9851 . + 0 ID=cds-WP_000131699.1;Parent=gene-C9E93_RS08225;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9E93_RS08225;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 9966 10892 . + . ID=gene-C9E93_RS08230;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9E93_RS08230;old_locus_tag=C9E93_08455 NZ_PYJV01000054.1 Protein Homology CDS 9966 10892 . + 0 ID=cds-WP_000423371.1;Parent=gene-C9E93_RS08230;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9E93_RS08230;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 10990 12393 . + . ID=gene-C9E93_RS08235;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9E93_RS08235;old_locus_tag=C9E93_08460 NZ_PYJV01000054.1 Protein Homology CDS 10990 12393 . + 0 ID=cds-WP_135369934.1;Parent=gene-C9E93_RS08235;Dbxref=GenBank:WP_135369934.1;Name=WP_135369934.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9E93_RS08235;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_135369934.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 12380 13519 . + . ID=gene-C9E93_RS08240;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9E93_RS08240;old_locus_tag=C9E93_08465 NZ_PYJV01000054.1 Protein Homology CDS 12380 13519 . + 0 ID=cds-WP_000811134.1;Parent=gene-C9E93_RS08240;Dbxref=GenBank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9E93_RS08240;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 13570 14874 . + . ID=gene-C9E93_RS08245;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9E93_RS08245;old_locus_tag=C9E93_08470 NZ_PYJV01000054.1 Protein Homology CDS 13570 14874 . + 0 ID=cds-WP_000057014.1;Parent=gene-C9E93_RS08245;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9E93_RS08245;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 14923 15255 . - . ID=gene-C9E93_RS08250;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9E93_RS08250;old_locus_tag=C9E93_08475 NZ_PYJV01000054.1 Protein Homology CDS 14923 15255 . - 0 ID=cds-WP_000722260.1;Parent=gene-C9E93_RS08250;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9E93_RS08250;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_PYJV01000054.1 RefSeq gene 15305 16711 . - . ID=gene-C9E93_RS08255;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9E93_RS08255;old_locus_tag=C9E93_08480 NZ_PYJV01000054.1 Protein Homology CDS 15305 16711 . - 0 ID=cds-WP_001258803.1;Parent=gene-C9E93_RS08255;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9E93_RS08255;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 ##sequence-region NZ_PYJV01000009.1 1 17104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000009.1 RefSeq region 1 17104 . + . ID=NZ_PYJV01000009.1:1..17104;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000009.1 RefSeq gene 1 1598 . + . ID=gene-C9E93_RS00585;Name=C9E93_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00585;old_locus_tag=C9E93_00625;partial=true;start_range=.,1 NZ_PYJV01000009.1 Protein Homology CDS 1 1598 . + 2 ID=cds-WP_135400575.1;Parent=gene-C9E93_RS00585;Dbxref=GenBank:WP_135400575.1;Name=WP_135400575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049444.1;locus_tag=C9E93_RS00585;partial=true;product=hypothetical protein;protein_id=WP_135400575.1;start_range=.,1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 1839 2555 . - . ID=gene-C9E93_RS00590;Name=C9E93_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00590;old_locus_tag=C9E93_00630 NZ_PYJV01000009.1 Protein Homology CDS 1839 2555 . - 0 ID=cds-WP_000532937.1;Parent=gene-C9E93_RS00590;Dbxref=GenBank:WP_000532937.1;Name=WP_000532937.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=C9E93_RS00590;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532937.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 3115 4746 . - . ID=gene-C9E93_RS00595;Name=C9E93_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00595;old_locus_tag=C9E93_00640 NZ_PYJV01000009.1 Protein Homology CDS 3115 4746 . - 0 ID=cds-WP_135370284.1;Parent=gene-C9E93_RS00595;Dbxref=GenBank:WP_135370284.1;Name=WP_135370284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9E93_RS00595;product=class I SAM-dependent methyltransferase;protein_id=WP_135370284.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 4751 5008 . - . ID=gene-C9E93_RS00600;Name=C9E93_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00600;old_locus_tag=C9E93_00645 NZ_PYJV01000009.1 Protein Homology CDS 4751 5008 . - 0 ID=cds-WP_001054380.1;Parent=gene-C9E93_RS00600;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9E93_RS00600;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 5497 6105 . + . ID=gene-C9E93_RS00610;Name=C9E93_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00610;old_locus_tag=C9E93_00660 NZ_PYJV01000009.1 Protein Homology CDS 5497 6105 . + 0 ID=cds-WP_000864865.1;Parent=gene-C9E93_RS00610;Dbxref=GenBank:WP_000864865.1;Name=WP_000864865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9E93_RS00610;product=DUF1062 domain-containing protein;protein_id=WP_000864865.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 6481 7392 . + . ID=gene-C9E93_RS00615;Name=C9E93_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00615;old_locus_tag=C9E93_00665 NZ_PYJV01000009.1 Protein Homology CDS 6481 7392 . + 0 ID=cds-WP_135370285.1;Parent=gene-C9E93_RS00615;Dbxref=GenBank:WP_135370285.1;Name=WP_135370285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9E93_RS00615;product=STM4504/CBY_0614 family protein;protein_id=WP_135370285.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 7597 8058 . + . ID=gene-C9E93_RS00620;Name=C9E93_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00620;old_locus_tag=C9E93_00670 NZ_PYJV01000009.1 Protein Homology CDS 7597 8058 . + 0 ID=cds-WP_001654330.1;Parent=gene-C9E93_RS00620;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9E93_RS00620;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 8055 8729 . - . ID=gene-C9E93_RS00625;Name=C9E93_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00625;old_locus_tag=C9E93_00675 NZ_PYJV01000009.1 Protein Homology CDS 8055 8729 . - 0 ID=cds-WP_135370286.1;Parent=gene-C9E93_RS00625;Dbxref=GenBank:WP_135370286.1;Name=WP_135370286.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9E93_RS00625;product=dienelactone hydrolase family protein;protein_id=WP_135370286.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 9079 9852 . + . ID=gene-C9E93_RS00630;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9E93_RS00630;old_locus_tag=C9E93_00685 NZ_PYJV01000009.1 Protein Homology CDS 9079 9852 . + 0 ID=cds-WP_000841654.1;Parent=gene-C9E93_RS00630;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9E93_RS00630;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 9853 10866 . - . ID=gene-C9E93_RS00635;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E93_RS00635;old_locus_tag=C9E93_00690 NZ_PYJV01000009.1 Protein Homology CDS 9853 10866 . - 0 ID=cds-WP_001094611.1;Parent=gene-C9E93_RS00635;Dbxref=GenBank:WP_001094611.1;Name=WP_001094611.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9E93_RS00635;product=tryptophan--tRNA ligase;protein_id=WP_001094611.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 11584 12114 . + . ID=gene-C9E93_RS00640;Name=C9E93_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00640;old_locus_tag=C9E93_00695 NZ_PYJV01000009.1 Protein Homology CDS 11584 12114 . + 0 ID=cds-WP_000907671.1;Parent=gene-C9E93_RS00640;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9E93_RS00640;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 12353 13087 . + . ID=gene-C9E93_RS00645;Name=C9E93_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00645;old_locus_tag=C9E93_00705 NZ_PYJV01000009.1 Protein Homology CDS 12353 13087 . + 0 ID=cds-WP_000683251.1;Parent=gene-C9E93_RS00645;Dbxref=GenBank:WP_000683251.1;Name=WP_000683251.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9E93_RS00645;product=aspartate/glutamate racemase family protein;protein_id=WP_000683251.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 13093 14001 . - . ID=gene-C9E93_RS00650;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9E93_RS00650;old_locus_tag=C9E93_00710 NZ_PYJV01000009.1 Protein Homology CDS 13093 14001 . - 0 ID=cds-WP_000383509.1;Parent=gene-C9E93_RS00650;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9E93_RS00650;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 14120 15292 . - . ID=gene-C9E93_RS00655;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9E93_RS00655;old_locus_tag=C9E93_00715 NZ_PYJV01000009.1 Protein Homology CDS 14120 15292 . - 0 ID=cds-WP_001113052.1;Parent=gene-C9E93_RS00655;Dbxref=GenBank:WP_001113052.1;Name=WP_001113052.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9E93_RS00655;product=beta-aspartyl-peptidase;protein_id=WP_001113052.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 15305 15766 . - . ID=gene-C9E93_RS00660;Name=C9E93_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00660;old_locus_tag=C9E93_00720 NZ_PYJV01000009.1 Protein Homology CDS 15305 15766 . - 0 ID=cds-WP_000211979.1;Parent=gene-C9E93_RS00660;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9E93_RS00660;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_PYJV01000009.1 RefSeq gene 15763 16434 . - . ID=gene-C9E93_RS00665;Name=C9E93_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00665;old_locus_tag=C9E93_00725 NZ_PYJV01000009.1 Protein Homology CDS 15763 16434 . - 0 ID=cds-WP_000068752.1;Parent=gene-C9E93_RS00665;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=C9E93_RS00665;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 ##sequence-region NZ_PYJV01000025.1 1 15638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000025.1 RefSeq region 1 15638 . + . ID=NZ_PYJV01000025.1:1..15638;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000025.1 RefSeq gene 1 180 . + . ID=gene-C9E93_RS23655;Name=C9E93_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23655;partial=true;start_range=.,1 NZ_PYJV01000025.1 GeneMarkS-2+ CDS 1 180 . + 0 ID=cds-WP_206308168.1;Parent=gene-C9E93_RS23655;Dbxref=GenBank:WP_206308168.1;Name=WP_206308168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23655;partial=true;product=hypothetical protein;protein_id=WP_206308168.1;start_range=.,1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 199 849 . + . ID=gene-C9E93_RS03600;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9E93_RS03600;old_locus_tag=C9E93_03740 NZ_PYJV01000025.1 Protein Homology CDS 199 849 . + 0 ID=cds-WP_000481517.1;Parent=gene-C9E93_RS03600;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9E93_RS03600;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 854 1249 . + . ID=gene-C9E93_RS03605;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9E93_RS03605;old_locus_tag=C9E93_03745 NZ_PYJV01000025.1 Protein Homology CDS 854 1249 . + 0 ID=cds-WP_000833307.1;Parent=gene-C9E93_RS03605;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9E93_RS03605;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 1276 1692 . + . ID=gene-C9E93_RS03610;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9E93_RS03610;old_locus_tag=C9E93_03750 NZ_PYJV01000025.1 Protein Homology CDS 1276 1692 . + 0 ID=cds-WP_001264073.1;Parent=gene-C9E93_RS03610;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9E93_RS03610;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 1719 2552 . + . ID=gene-C9E93_RS03615;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9E93_RS03615;old_locus_tag=C9E93_03755 NZ_PYJV01000025.1 Protein Homology CDS 1719 2552 . + 0 ID=cds-WP_001137620.1;Parent=gene-C9E93_RS03615;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9E93_RS03615;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 2591 3073 . - . ID=gene-C9E93_RS03620;Name=C9E93_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03620;old_locus_tag=C9E93_03760 NZ_PYJV01000025.1 Protein Homology CDS 2591 3073 . - 0 ID=cds-WP_001546652.1;Parent=gene-C9E93_RS03620;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9E93_RS03620;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 3174 3728 . - . ID=gene-C9E93_RS03625;Name=C9E93_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03625;old_locus_tag=C9E93_03765 NZ_PYJV01000025.1 Protein Homology CDS 3174 3728 . - 0 ID=cds-WP_001001883.1;Parent=gene-C9E93_RS03625;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9E93_RS03625;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 3752 4489 . - . ID=gene-C9E93_RS03630;Name=C9E93_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03630;old_locus_tag=C9E93_03770 NZ_PYJV01000025.1 Protein Homology CDS 3752 4489 . - 0 ID=cds-WP_000283643.1;Parent=gene-C9E93_RS03630;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9E93_RS03630;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 4574 5512 . - . ID=gene-C9E93_RS03635;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9E93_RS03635;old_locus_tag=C9E93_03775 NZ_PYJV01000025.1 Protein Homology CDS 4574 5512 . - 0 ID=cds-WP_000402552.1;Parent=gene-C9E93_RS03635;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9E93_RS03635;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 5748 5835 . + . ID=gene-C9E93_RS03645;Name=C9E93_RS03645;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS03645;old_locus_tag=C9E93_03785 NZ_PYJV01000025.1 tRNAscan-SE tRNA 5748 5835 . + . ID=rna-C9E93_RS03645;Parent=gene-C9E93_RS03645;anticodon=(pos:5782..5784);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03645;product=tRNA-Ser NZ_PYJV01000025.1 tRNAscan-SE exon 5748 5835 . + . ID=exon-C9E93_RS03645-1;Parent=rna-C9E93_RS03645;anticodon=(pos:5782..5784);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03645;product=tRNA-Ser NZ_PYJV01000025.1 RefSeq pseudogene 6083 6181 . + . ID=gene-C9E93_RS23840;Name=C9E93_RS23840;end_range=6181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23840;old_locus_tag=C9E93_03790;partial=true;pseudo=true;start_range=.,6083 NZ_PYJV01000025.1 Protein Homology CDS 6083 6181 . + 0 ID=cds-C9E93_RS23840;Parent=gene-C9E93_RS23840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=C9E93_RS23840;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,6083;transl_table=11 NZ_PYJV01000025.1 RefSeq pseudogene 6264 6380 . + . ID=gene-C9E93_RS03655;Name=C9E93_RS03655;end_range=6380,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03655;old_locus_tag=C9E93_03795;partial=true;pseudo=true NZ_PYJV01000025.1 Protein Homology CDS 6264 6380 . + 0 ID=cds-C9E93_RS03655;Parent=gene-C9E93_RS03655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6380,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=C9E93_RS03655;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 6606 7622 . - . ID=gene-C9E93_RS03660;Name=C9E93_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03660;old_locus_tag=C9E93_03800 NZ_PYJV01000025.1 Protein Homology CDS 6606 7622 . - 0 ID=cds-WP_135370334.1;Parent=gene-C9E93_RS03660;Dbxref=GenBank:WP_135370334.1;Name=WP_135370334.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=C9E93_RS03660;product=IS110-like element ISSaen1 family transposase;protein_id=WP_135370334.1;transl_table=11 NZ_PYJV01000025.1 RefSeq pseudogene 7692 7823 . + . ID=gene-C9E93_RS03665;Name=C9E93_RS03665;end_range=7823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03665;old_locus_tag=C9E93_03805;partial=true;pseudo=true;start_range=.,7692 NZ_PYJV01000025.1 Protein Homology CDS 7692 7823 . + 0 ID=cds-C9E93_RS03665;Parent=gene-C9E93_RS03665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=C9E93_RS03665;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,7692;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 8084 8902 . - . ID=gene-C9E93_RS03670;Name=C9E93_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03670;old_locus_tag=C9E93_03810 NZ_PYJV01000025.1 Protein Homology CDS 8084 8902 . - 0 ID=cds-WP_031605455.1;Parent=gene-C9E93_RS03670;Dbxref=GenBank:WP_031605455.1;Name=WP_031605455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=C9E93_RS03670;product=hypothetical protein;protein_id=WP_031605455.1;transl_table=11 NZ_PYJV01000025.1 RefSeq pseudogene 9384 9629 . - . ID=gene-C9E93_RS24135;Name=C9E93_RS24135;end_range=9629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24135;partial=true;pseudo=true NZ_PYJV01000025.1 Protein Homology CDS 9384 9629 . - 0 ID=cds-C9E93_RS24135;Parent=gene-C9E93_RS24135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524936.1;locus_tag=C9E93_RS24135;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 9920 10009 . - . ID=gene-C9E93_RS03685;Name=C9E93_RS03685;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS03685;old_locus_tag=C9E93_03825 NZ_PYJV01000025.1 tRNAscan-SE tRNA 9920 10009 . - . ID=rna-C9E93_RS03685;Parent=gene-C9E93_RS03685;anticodon=(pos:complement(9973..9975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03685;product=tRNA-Ser NZ_PYJV01000025.1 tRNAscan-SE exon 9920 10009 . - . ID=exon-C9E93_RS03685-1;Parent=rna-C9E93_RS03685;anticodon=(pos:complement(9973..9975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03685;product=tRNA-Ser NZ_PYJV01000025.1 RefSeq gene 10098 10895 . + . ID=gene-C9E93_RS03690;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9E93_RS03690;old_locus_tag=C9E93_03830 NZ_PYJV01000025.1 Protein Homology CDS 10098 10895 . + 0 ID=cds-WP_000598920.1;Parent=gene-C9E93_RS03690;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9E93_RS03690;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 10996 11071 . + . ID=gene-C9E93_RS03695;Name=C9E93_RS03695;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS03695;old_locus_tag=C9E93_03835 NZ_PYJV01000025.1 tRNAscan-SE tRNA 10996 11071 . + . ID=rna-C9E93_RS03695;Parent=gene-C9E93_RS03695;anticodon=(pos:11029..11031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03695;product=tRNA-Asn NZ_PYJV01000025.1 tRNAscan-SE exon 10996 11071 . + . ID=exon-C9E93_RS03695-1;Parent=rna-C9E93_RS03695;anticodon=(pos:11029..11031);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03695;product=tRNA-Asn NZ_PYJV01000025.1 RefSeq pseudogene 11239 11544 . + . ID=gene-C9E93_RS03700;Name=C9E93_RS03700;end_range=11544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03700;old_locus_tag=C9E93_03840;partial=true;pseudo=true NZ_PYJV01000025.1 Protein Homology CDS 11239 11544 . + 0 ID=cds-C9E93_RS03700;Parent=gene-C9E93_RS03700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=11544,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9E93_RS03700;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 11966 12041 . + . ID=gene-C9E93_RS03705;Name=C9E93_RS03705;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS03705;old_locus_tag=C9E93_03845 NZ_PYJV01000025.1 tRNAscan-SE tRNA 11966 12041 . + . ID=rna-C9E93_RS03705;Parent=gene-C9E93_RS03705;anticodon=(pos:11999..12001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03705;product=tRNA-Asn NZ_PYJV01000025.1 tRNAscan-SE exon 11966 12041 . + . ID=exon-C9E93_RS03705-1;Parent=rna-C9E93_RS03705;anticodon=(pos:11999..12001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS03705;product=tRNA-Asn NZ_PYJV01000025.1 RefSeq gene 12221 13495 . + . ID=gene-C9E93_RS03710;Name=C9E93_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03710;old_locus_tag=C9E93_03850 NZ_PYJV01000025.1 Protein Homology CDS 12221 13495 . + 0 ID=cds-WP_135370425.1;Parent=gene-C9E93_RS03710;Dbxref=GenBank:WP_135370425.1;Name=WP_135370425.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9E93_RS03710;product=tyrosine-type recombinase/integrase;protein_id=WP_135370425.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 13562 13813 . - . ID=gene-C9E93_RS03715;Name=C9E93_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03715;old_locus_tag=C9E93_03855 NZ_PYJV01000025.1 Protein Homology CDS 13562 13813 . - 0 ID=cds-WP_000042271.1;Parent=gene-C9E93_RS03715;Dbxref=GenBank:WP_000042271.1;Name=WP_000042271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212204.1;locus_tag=C9E93_RS03715;product=hypothetical protein;protein_id=WP_000042271.1;transl_table=11 NZ_PYJV01000025.1 RefSeq gene 14356 15231 . + . ID=gene-C9E93_RS03725;Name=C9E93_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03725;old_locus_tag=C9E93_03865 NZ_PYJV01000025.1 Protein Homology CDS 14356 15231 . + 0 ID=cds-WP_023182023.1;Parent=gene-C9E93_RS03725;Dbxref=GenBank:WP_023182023.1;Name=WP_023182023.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.6;locus_tag=C9E93_RS03725;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_023182023.1;transl_table=11 NZ_PYJV01000025.1 RefSeq pseudogene 15368 15638 . + . ID=gene-C9E93_RS23660;Name=C9E93_RS23660;end_range=15638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23660;old_locus_tag=C9E93_03870;partial=true;pseudo=true NZ_PYJV01000025.1 Protein Homology CDS 15368 15638 . + 0 ID=cds-C9E93_RS23660;Parent=gene-C9E93_RS23660;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432034.1;locus_tag=C9E93_RS23660;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000027.1 1 14658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000027.1 RefSeq region 1 14658 . + . ID=NZ_PYJV01000027.1:1..14658;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000027.1 RefSeq gene 270 1322 . + . ID=gene-C9E93_RS03915;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9E93_RS03915;old_locus_tag=C9E93_04065 NZ_PYJV01000027.1 Protein Homology CDS 270 1322 . + 0 ID=cds-WP_135370154.1;Parent=gene-C9E93_RS03915;Dbxref=GenBank:WP_135370154.1;Name=WP_135370154.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9E93_RS03915;product=type III secretion system effector PipB2;protein_id=WP_135370154.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 1497 1829 . + . ID=gene-C9E93_RS03920;Name=C9E93_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03920;old_locus_tag=C9E93_04070 NZ_PYJV01000027.1 Protein Homology CDS 1497 1829 . + 0 ID=cds-WP_080217914.1;Parent=gene-C9E93_RS03920;Dbxref=GenBank:WP_080217914.1;Name=WP_080217914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9E93_RS03920;product=hypothetical protein;protein_id=WP_080217914.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 2361 4535 . + . ID=gene-C9E93_RS03925;Name=C9E93_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03925;old_locus_tag=C9E93_04075 NZ_PYJV01000027.1 Protein Homology CDS 2361 4535 . + 0 ID=cds-WP_303396430.1;Parent=gene-C9E93_RS03925;Dbxref=GenBank:WP_303396430.1;Name=WP_303396430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=C9E93_RS03925;product=TonB-dependent siderophore receptor;protein_id=WP_303396430.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 4577 5512 . - . ID=gene-C9E93_RS03930;Name=C9E93_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03930;old_locus_tag=C9E93_04080 NZ_PYJV01000027.1 Protein Homology CDS 4577 5512 . - 0 ID=cds-WP_135370256.1;Parent=gene-C9E93_RS03930;Dbxref=GenBank:WP_135370256.1;Name=WP_135370256.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9E93_RS03930;product=alpha/beta hydrolase;protein_id=WP_135370256.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 5544 6788 . - . ID=gene-C9E93_RS03935;Name=C9E93_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03935;old_locus_tag=C9E93_04085 NZ_PYJV01000027.1 Protein Homology CDS 5544 6788 . - 0 ID=cds-WP_135370255.1;Parent=gene-C9E93_RS03935;Dbxref=GenBank:WP_135370255.1;Name=WP_135370255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9E93_RS03935;product=esterase family protein;protein_id=WP_135370255.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 6898 10554 . - . ID=gene-C9E93_RS03940;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=C9E93_RS03940;old_locus_tag=C9E93_04090 NZ_PYJV01000027.1 Protein Homology CDS 6898 10554 . - 0 ID=cds-WP_135370254.1;Parent=gene-C9E93_RS03940;Dbxref=GenBank:WP_135370254.1;Name=WP_135370254.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9E93_RS03940;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_135370254.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 10635 11750 . - . ID=gene-C9E93_RS03945;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9E93_RS03945;old_locus_tag=C9E93_04095 NZ_PYJV01000027.1 Protein Homology CDS 10635 11750 . - 0 ID=cds-WP_135370253.1;Parent=gene-C9E93_RS03945;Dbxref=GenBank:WP_135370253.1;Name=WP_135370253.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9E93_RS03945;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_135370253.1;transl_table=11 NZ_PYJV01000027.1 RefSeq pseudogene 12331 12549 . - . ID=gene-C9E93_RS03960;Name=C9E93_RS03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS03960;old_locus_tag=C9E93_04110;partial=true;pseudo=true;start_range=.,12331 NZ_PYJV01000027.1 Protein Homology CDS 12331 12549 . - 0 ID=cds-C9E93_RS03960;Parent=gene-C9E93_RS03960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461672.1;locus_tag=C9E93_RS03960;partial=true;product=DUF927 domain-containing protein;pseudo=true;start_range=.,12331;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 12585 12800 . - . ID=gene-C9E93_RS03965;Name=C9E93_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03965;old_locus_tag=C9E93_04115 NZ_PYJV01000027.1 Protein Homology CDS 12585 12800 . - 0 ID=cds-WP_135370250.1;Parent=gene-C9E93_RS03965;Dbxref=GenBank:WP_135370250.1;Name=WP_135370250.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461671.1;locus_tag=C9E93_RS03965;product=AlpA family transcriptional regulator;protein_id=WP_135370250.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 13184 13948 . + . ID=gene-C9E93_RS03970;Name=C9E93_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03970;old_locus_tag=C9E93_04120 NZ_PYJV01000027.1 GeneMarkS-2+ CDS 13184 13948 . + 0 ID=cds-WP_135400586.1;Parent=gene-C9E93_RS03970;Dbxref=GenBank:WP_135400586.1;Name=WP_135400586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS03970;product=hypothetical protein;protein_id=WP_135400586.1;transl_table=11 NZ_PYJV01000027.1 RefSeq gene 13961 14506 . + . ID=gene-C9E93_RS03975;Name=C9E93_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS03975;old_locus_tag=C9E93_04125 NZ_PYJV01000027.1 GeneMarkS-2+ CDS 13961 14506 . + 0 ID=cds-WP_135400587.1;Parent=gene-C9E93_RS03975;Dbxref=GenBank:WP_135400587.1;Name=WP_135400587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS03975;product=hypothetical protein;protein_id=WP_135400587.1;transl_table=11 ##sequence-region NZ_PYJV01000132.1 1 11943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000132.1 RefSeq region 1 11943 . + . ID=NZ_PYJV01000132.1:1..11943;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000132.1 RefSeq gene 42 1253 . - . ID=gene-C9E93_RS23525;Name=C9E93_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23525;old_locus_tag=C9E93_24165 NZ_PYJV01000132.1 Protein Homology CDS 42 1253 . - 0 ID=cds-WP_000446772.1;Parent=gene-C9E93_RS23525;Dbxref=GenBank:WP_000446772.1;Name=WP_000446772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9E93_RS23525;product=multidrug efflux MFS transporter;protein_id=WP_000446772.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 1422 2135 . - . ID=gene-C9E93_RS23530;Name=C9E93_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23530;old_locus_tag=C9E93_24170 NZ_PYJV01000132.1 Protein Homology CDS 1422 2135 . - 0 ID=cds-WP_050068204.1;Parent=gene-C9E93_RS23530;Dbxref=GenBank:WP_050068204.1;Name=WP_050068204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9E93_RS23530;product=extensin-like domain-containing protein;protein_id=WP_050068204.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 2213 3307 . + . ID=gene-C9E93_RS23535;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9E93_RS23535;old_locus_tag=C9E93_24175 NZ_PYJV01000132.1 Protein Homology CDS 2213 3307 . + 0 ID=cds-WP_001096588.1;Parent=gene-C9E93_RS23535;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9E93_RS23535;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 3333 3548 . - . ID=gene-C9E93_RS23540;Name=C9E93_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23540;old_locus_tag=C9E93_24180 NZ_PYJV01000132.1 Protein Homology CDS 3333 3548 . - 0 ID=cds-WP_001239242.1;Parent=gene-C9E93_RS23540;Dbxref=GenBank:WP_001239242.1;Name=WP_001239242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9E93_RS23540;product=DUF2754 family protein;protein_id=WP_001239242.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 3816 4124 . + . ID=gene-C9E93_RS23545;Name=C9E93_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23545;old_locus_tag=C9E93_24185 NZ_PYJV01000132.1 Protein Homology CDS 3816 4124 . + 0 ID=cds-WP_000763139.1;Parent=gene-C9E93_RS23545;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9E93_RS23545;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 4162 5256 . - . ID=gene-C9E93_RS23550;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9E93_RS23550;old_locus_tag=C9E93_24190 NZ_PYJV01000132.1 Protein Homology CDS 4162 5256 . - 0 ID=cds-WP_001271421.1;Parent=gene-C9E93_RS23550;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9E93_RS23550;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 5271 6491 . - . ID=gene-C9E93_RS23555;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9E93_RS23555;old_locus_tag=C9E93_24195 NZ_PYJV01000132.1 Protein Homology CDS 5271 6491 . - 0 ID=cds-WP_000477023.1;Parent=gene-C9E93_RS23555;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9E93_RS23555;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 6838 7995 . + . ID=gene-C9E93_RS23565;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9E93_RS23565;old_locus_tag=C9E93_24205 NZ_PYJV01000132.1 Protein Homology CDS 6838 7995 . + 0 ID=cds-WP_000830775.1;Parent=gene-C9E93_RS23565;Dbxref=GenBank:WP_000830775.1;Name=WP_000830775.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9E93_RS23565;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830775.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 8040 8663 . - . ID=gene-C9E93_RS23570;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9E93_RS23570;old_locus_tag=C9E93_24210 NZ_PYJV01000132.1 Protein Homology CDS 8040 8663 . - 0 ID=cds-WP_000950242.1;Parent=gene-C9E93_RS23570;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9E93_RS23570;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_PYJV01000132.1 RefSeq gene 8749 11694 . - . ID=gene-C9E93_RS23575;Name=C9E93_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23575;old_locus_tag=C9E93_24215 NZ_PYJV01000132.1 Protein Homology CDS 8749 11694 . - 0 ID=cds-WP_094914576.1;Parent=gene-C9E93_RS23575;Dbxref=GenBank:WP_094914576.1;Name=WP_094914576.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9E93_RS23575;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_094914576.1;transl_table=11 ##sequence-region NZ_PYJV01000058.1 1 11913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000058.1 RefSeq region 1 11913 . + . ID=NZ_PYJV01000058.1:1..11913;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000058.1 RefSeq gene 1 220 . + . ID=gene-C9E93_RS23705;Name=C9E93_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23705;old_locus_tag=C9E93_09335;partial=true;start_range=.,1 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 1 220 . + 1 ID=cds-WP_217810207.1;Parent=gene-C9E93_RS23705;Dbxref=GenBank:WP_217810207.1;Name=WP_217810207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS23705;partial=true;product=hypothetical protein;protein_id=WP_217810207.1;start_range=.,1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 619 1086 . + . ID=gene-C9E93_RS09100;Name=C9E93_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09100;old_locus_tag=C9E93_09340 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 619 1086 . + 0 ID=cds-WP_135370466.1;Parent=gene-C9E93_RS09100;Dbxref=GenBank:WP_135370466.1;Name=WP_135370466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09100;product=hypothetical protein;protein_id=WP_135370466.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 1083 2783 . + . ID=gene-C9E93_RS09105;Name=C9E93_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09105;old_locus_tag=C9E93_09345 NZ_PYJV01000058.1 Protein Homology CDS 1083 2783 . + 0 ID=cds-WP_135370467.1;Parent=gene-C9E93_RS09105;Dbxref=GenBank:WP_135370467.1;Name=WP_135370467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015211.6;locus_tag=C9E93_RS09105;product=terminase large subunit domain-containing protein;protein_id=WP_135370467.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 2780 4780 . + . ID=gene-C9E93_RS09110;Name=C9E93_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09110;old_locus_tag=C9E93_09350 NZ_PYJV01000058.1 Protein Homology CDS 2780 4780 . + 0 ID=cds-WP_135370468.1;Parent=gene-C9E93_RS09110;Dbxref=GenBank:WP_135370468.1;Name=WP_135370468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049598.1;locus_tag=C9E93_RS09110;product=portal protein;protein_id=WP_135370468.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 4790 5683 . + . ID=gene-C9E93_RS09115;Name=C9E93_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09115;old_locus_tag=C9E93_09355 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 4790 5683 . + 0 ID=cds-WP_135370469.1;Parent=gene-C9E93_RS09115;Dbxref=GenBank:WP_135370469.1;Name=WP_135370469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09115;product=hypothetical protein;protein_id=WP_135370469.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 5683 6600 . + . ID=gene-C9E93_RS09120;Name=C9E93_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09120;old_locus_tag=C9E93_09360 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 5683 6600 . + 0 ID=cds-WP_135370470.1;Parent=gene-C9E93_RS09120;Dbxref=GenBank:WP_135370470.1;Name=WP_135370470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09120;product=hypothetical protein;protein_id=WP_135370470.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 7001 7510 . + . ID=gene-C9E93_RS09125;Name=C9E93_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09125;old_locus_tag=C9E93_09370 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 7001 7510 . + 0 ID=cds-WP_135370471.1;Parent=gene-C9E93_RS09125;Dbxref=GenBank:WP_135370471.1;Name=WP_135370471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09125;product=hypothetical protein;protein_id=WP_135370471.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 7507 8730 . + . ID=gene-C9E93_RS09130;Name=C9E93_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09130;old_locus_tag=C9E93_09375 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 7507 8730 . + 0 ID=cds-WP_135370472.1;Parent=gene-C9E93_RS09130;Dbxref=GenBank:WP_135370472.1;Name=WP_135370472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09130;product=hypothetical protein;protein_id=WP_135370472.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 8727 10730 . + . ID=gene-C9E93_RS09135;Name=C9E93_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09135;old_locus_tag=C9E93_09380 NZ_PYJV01000058.1 GeneMarkS-2+ CDS 8727 10730 . + 0 ID=cds-WP_135370473.1;Parent=gene-C9E93_RS09135;Dbxref=GenBank:WP_135370473.1;Name=WP_135370473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E93_RS09135;product=hypothetical protein;protein_id=WP_135370473.1;transl_table=11 NZ_PYJV01000058.1 RefSeq gene 10825 11826 . + . ID=gene-C9E93_RS09140;Name=C9E93_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09140;old_locus_tag=C9E93_09385 NZ_PYJV01000058.1 Protein Homology CDS 10825 11826 . + 0 ID=cds-WP_023201964.1;Parent=gene-C9E93_RS09140;Dbxref=GenBank:WP_023201964.1;Name=WP_023201964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036552.6;locus_tag=C9E93_RS09140;product=SU10 major capsid protein;protein_id=WP_023201964.1;transl_table=11 ##sequence-region NZ_PYJV01000084.1 1 10882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000084.1 RefSeq region 1 10882 . + . ID=NZ_PYJV01000084.1:1..10882;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000084.1 RefSeq gene 133 1800 . - . ID=gene-C9E93_RS14865;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9E93_RS14865;old_locus_tag=C9E93_15245 NZ_PYJV01000084.1 Protein Homology CDS 133 1800 . - 0 ID=cds-WP_001287181.1;Parent=gene-C9E93_RS14865;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9E93_RS14865;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 2011 3963 . - . ID=gene-C9E93_RS14870;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9E93_RS14870;old_locus_tag=C9E93_15250 NZ_PYJV01000084.1 Protein Homology CDS 2011 3963 . - 0 ID=cds-WP_001023069.1;Parent=gene-C9E93_RS14870;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9E93_RS14870;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 4290 5090 . + . ID=gene-C9E93_RS14875;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9E93_RS14875;old_locus_tag=C9E93_15255 NZ_PYJV01000084.1 Protein Homology CDS 4290 5090 . + 0 ID=cds-WP_001237059.1;Parent=gene-C9E93_RS14875;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9E93_RS14875;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 5150 6304 . + . ID=gene-C9E93_RS14880;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9E93_RS14880;old_locus_tag=C9E93_15260 NZ_PYJV01000084.1 Protein Homology CDS 5150 6304 . + 0 ID=cds-WP_000271186.1;Parent=gene-C9E93_RS14880;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9E93_RS14880;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 6309 7529 . + . ID=gene-C9E93_RS14885;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9E93_RS14885;old_locus_tag=C9E93_15265 NZ_PYJV01000084.1 Protein Homology CDS 6309 7529 . + 0 ID=cds-WP_000187578.1;Parent=gene-C9E93_RS14885;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9E93_RS14885;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 7576 8328 . + . ID=gene-C9E93_RS14890;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9E93_RS14890;old_locus_tag=C9E93_15270 NZ_PYJV01000084.1 Protein Homology CDS 7576 8328 . + 0 ID=cds-WP_000153143.1;Parent=gene-C9E93_RS14890;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9E93_RS14890;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 8618 10282 . + . ID=gene-C9E93_RS14895;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9E93_RS14895;old_locus_tag=C9E93_15275 NZ_PYJV01000084.1 Protein Homology CDS 8618 10282 . + 0 ID=cds-WP_000337034.1;Parent=gene-C9E93_RS14895;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9E93_RS14895;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_PYJV01000084.1 RefSeq gene 10504 10580 . + . ID=gene-C9E93_RS14900;Name=C9E93_RS14900;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS14900;old_locus_tag=C9E93_15280 NZ_PYJV01000084.1 tRNAscan-SE tRNA 10504 10580 . + . ID=rna-C9E93_RS14900;Parent=gene-C9E93_RS14900;anticodon=(pos:10538..10540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14900;product=tRNA-Met NZ_PYJV01000084.1 tRNAscan-SE exon 10504 10580 . + . ID=exon-C9E93_RS14900-1;Parent=rna-C9E93_RS14900;anticodon=(pos:10538..10540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14900;product=tRNA-Met NZ_PYJV01000084.1 RefSeq gene 10589 10673 . + . ID=gene-C9E93_RS14905;Name=C9E93_RS14905;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS14905;old_locus_tag=C9E93_15285 NZ_PYJV01000084.1 tRNAscan-SE tRNA 10589 10673 . + . ID=rna-C9E93_RS14905;Parent=gene-C9E93_RS14905;anticodon=(pos:10623..10625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14905;product=tRNA-Leu NZ_PYJV01000084.1 tRNAscan-SE exon 10589 10673 . + . ID=exon-C9E93_RS14905-1;Parent=rna-C9E93_RS14905;anticodon=(pos:10623..10625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14905;product=tRNA-Leu NZ_PYJV01000084.1 RefSeq gene 10697 10771 . + . ID=gene-C9E93_RS14910;Name=C9E93_RS14910;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS14910;old_locus_tag=C9E93_15290 NZ_PYJV01000084.1 tRNAscan-SE tRNA 10697 10771 . + . ID=rna-C9E93_RS14910;Parent=gene-C9E93_RS14910;anticodon=(pos:10729..10731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14910;product=tRNA-Gln NZ_PYJV01000084.1 tRNAscan-SE exon 10697 10771 . + . ID=exon-C9E93_RS14910-1;Parent=rna-C9E93_RS14910;anticodon=(pos:10729..10731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14910;product=tRNA-Gln NZ_PYJV01000084.1 RefSeq gene 10807 10881 . + . ID=gene-C9E93_RS14915;Name=C9E93_RS14915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS14915;old_locus_tag=C9E93_15295 NZ_PYJV01000084.1 tRNAscan-SE tRNA 10807 10881 . + . ID=rna-C9E93_RS14915;Parent=gene-C9E93_RS14915;anticodon=(pos:10839..10841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14915;product=tRNA-Gln NZ_PYJV01000084.1 tRNAscan-SE exon 10807 10881 . + . ID=exon-C9E93_RS14915-1;Parent=rna-C9E93_RS14915;anticodon=(pos:10839..10841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS14915;product=tRNA-Gln ##sequence-region NZ_PYJV01000072.1 1 117516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000072.1 RefSeq region 1 117516 . + . ID=NZ_PYJV01000072.1:1..117516;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000072.1 RefSeq gene 450 2489 . - . ID=gene-C9E93_RS11650;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=C9E93_RS11650;old_locus_tag=C9E93_11950 NZ_PYJV01000072.1 Protein Homology CDS 450 2489 . - 0 ID=cds-WP_135370553.1;Parent=gene-C9E93_RS11650;Dbxref=GenBank:WP_135370553.1;Name=WP_135370553.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9E93_RS11650;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_135370553.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 2504 3394 . - . ID=gene-C9E93_RS11655;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9E93_RS11655;old_locus_tag=C9E93_11955 NZ_PYJV01000072.1 Protein Homology CDS 2504 3394 . - 0 ID=cds-WP_001205358.1;Parent=gene-C9E93_RS11655;Dbxref=GenBank:WP_001205358.1;Name=WP_001205358.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9E93_RS11655;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205358.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 3394 4191 . - . ID=gene-C9E93_RS11660;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9E93_RS11660;old_locus_tag=C9E93_11960 NZ_PYJV01000072.1 Protein Homology CDS 3394 4191 . - 0 ID=cds-WP_001157203.1;Parent=gene-C9E93_RS11660;Dbxref=GenBank:WP_001157203.1;Name=WP_001157203.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9E93_RS11660;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157203.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 4240 6429 . - . ID=gene-C9E93_RS11665;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9E93_RS11665;old_locus_tag=C9E93_11965 NZ_PYJV01000072.1 Protein Homology CDS 4240 6429 . - 0 ID=cds-WP_000113219.1;Parent=gene-C9E93_RS11665;Dbxref=GenBank:WP_000113219.1;Name=WP_000113219.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=C9E93_RS11665;product=ferrichrome porin FhuA;protein_id=WP_000113219.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 6722 9244 . - . ID=gene-C9E93_RS11670;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9E93_RS11670;old_locus_tag=C9E93_11970 NZ_PYJV01000072.1 Protein Homology CDS 6722 9244 . - 0 ID=cds-WP_000918127.1;Parent=gene-C9E93_RS11670;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9E93_RS11670;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 9385 11814 . - . ID=gene-C9E93_RS11675;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9E93_RS11675;old_locus_tag=C9E93_11975 NZ_PYJV01000072.1 Protein Homology CDS 9385 11814 . - 0 ID=cds-WP_023993175.1;Parent=gene-C9E93_RS11675;Dbxref=GenBank:WP_023993175.1;Name=WP_023993175.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=C9E93_RS11675;product=ATP-dependent helicase HrpB;protein_id=WP_023993175.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 11887 12417 . + . ID=gene-C9E93_RS11680;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9E93_RS11680;old_locus_tag=C9E93_11980 NZ_PYJV01000072.1 Protein Homology CDS 11887 12417 . + 0 ID=cds-WP_001294175.1;Parent=gene-C9E93_RS11680;Dbxref=GenBank:WP_001294175.1;Name=WP_001294175.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9E93_RS11680;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294175.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 12434 13138 . + . ID=gene-C9E93_RS11685;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9E93_RS11685;old_locus_tag=C9E93_11985 NZ_PYJV01000072.1 Protein Homology CDS 12434 13138 . + 0 ID=cds-WP_000899412.1;Parent=gene-C9E93_RS11685;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9E93_RS11685;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 13315 13770 . + . ID=gene-C9E93_RS11690;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9E93_RS11690;old_locus_tag=C9E93_11990 NZ_PYJV01000072.1 Protein Homology CDS 13315 13770 . + 0 ID=cds-WP_001155232.1;Parent=gene-C9E93_RS11690;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9E93_RS11690;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 13839 14735 . + . ID=gene-C9E93_RS11695;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9E93_RS11695;old_locus_tag=C9E93_11995 NZ_PYJV01000072.1 Protein Homology CDS 13839 14735 . + 0 ID=cds-WP_000132295.1;Parent=gene-C9E93_RS11695;Dbxref=GenBank:WP_000132295.1;Name=WP_000132295.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9E93_RS11695;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132295.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 14897 16294 . + . ID=gene-C9E93_RS11700;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9E93_RS11700;old_locus_tag=C9E93_12000 NZ_PYJV01000072.1 Protein Homology CDS 14897 16294 . + 0 ID=cds-WP_217810212.1;Parent=gene-C9E93_RS11700;Dbxref=GenBank:WP_217810212.1;Name=WP_217810212.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9E93_RS11700;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_217810212.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 16291 16770 . + . ID=gene-C9E93_RS11705;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9E93_RS11705;old_locus_tag=C9E93_12005 NZ_PYJV01000072.1 Protein Homology CDS 16291 16770 . + 0 ID=cds-WP_000150773.1;Parent=gene-C9E93_RS11705;Dbxref=GenBank:WP_000150773.1;Name=WP_000150773.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9E93_RS11705;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150773.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 16891 17682 . + . ID=gene-C9E93_RS11710;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9E93_RS11710;old_locus_tag=C9E93_12010 NZ_PYJV01000072.1 Protein Homology CDS 16891 17682 . + 0 ID=cds-WP_000805489.1;Parent=gene-C9E93_RS11710;Dbxref=GenBank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9E93_RS11710;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 17808 18662 . + . ID=gene-C9E93_RS11715;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9E93_RS11715;old_locus_tag=C9E93_12015 NZ_PYJV01000072.1 Protein Homology CDS 17808 18662 . + 0 ID=cds-WP_000905348.1;Parent=gene-C9E93_RS11715;Dbxref=GenBank:WP_000905348.1;Name=WP_000905348.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9E93_RS11715;product=pantoate--beta-alanine ligase;protein_id=WP_000905348.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 18757 19137 . + . ID=gene-C9E93_RS11720;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9E93_RS11720;old_locus_tag=C9E93_12020 NZ_PYJV01000072.1 Protein Homology CDS 18757 19137 . + 0 ID=cds-WP_000621526.1;Parent=gene-C9E93_RS11720;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9E93_RS11720;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 19144 20373 . - . ID=gene-C9E93_RS11725;Name=C9E93_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11725;old_locus_tag=C9E93_12025 NZ_PYJV01000072.1 Protein Homology CDS 19144 20373 . - 0 ID=cds-WP_000245312.1;Parent=gene-C9E93_RS11725;Dbxref=GenBank:WP_000245312.1;Name=WP_000245312.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9E93_RS11725;product=polysaccharide deacetylase family protein;protein_id=WP_000245312.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 20435 20875 . - . ID=gene-C9E93_RS11730;Name=C9E93_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11730;old_locus_tag=C9E93_12030 NZ_PYJV01000072.1 Protein Homology CDS 20435 20875 . - 0 ID=cds-WP_000901960.1;Parent=gene-C9E93_RS11730;Dbxref=GenBank:WP_000901960.1;Name=WP_000901960.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9E93_RS11730;product=PTS sugar transporter subunit IIA;protein_id=WP_000901960.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 21245 21784 . + . ID=gene-C9E93_RS11735;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=C9E93_RS11735;old_locus_tag=C9E93_12035 NZ_PYJV01000072.1 Protein Homology CDS 21245 21784 . + 0 ID=cds-WP_023204291.1;Parent=gene-C9E93_RS11735;Dbxref=GenBank:WP_023204291.1;Name=WP_023204291.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9E93_RS11735;product=Sti fimbria major subunit StiA;protein_id=WP_023204291.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 21832 22515 . + . ID=gene-C9E93_RS11740;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9E93_RS11740;old_locus_tag=C9E93_12040 NZ_PYJV01000072.1 Protein Homology CDS 21832 22515 . + 0 ID=cds-WP_001086408.1;Parent=gene-C9E93_RS11740;Dbxref=GenBank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9E93_RS11740;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 22542 25088 . + . ID=gene-C9E93_RS11745;Name=C9E93_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11745;old_locus_tag=C9E93_12045 NZ_PYJV01000072.1 Protein Homology CDS 22542 25088 . + 0 ID=cds-WP_135370330.1;Parent=gene-C9E93_RS11745;Dbxref=GenBank:WP_135370330.1;Name=WP_135370330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9E93_RS11745;product=fimbrial outer membrane usher protein;protein_id=WP_135370330.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 25097 26176 . + . ID=gene-C9E93_RS11750;Name=C9E93_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11750;old_locus_tag=C9E93_12050 NZ_PYJV01000072.1 Protein Homology CDS 25097 26176 . + 0 ID=cds-WP_023993180.1;Parent=gene-C9E93_RS11750;Dbxref=GenBank:WP_023993180.1;Name=WP_023993180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9E93_RS11750;product=fimbrial protein;protein_id=WP_023993180.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 26296 27066 . - . ID=gene-C9E93_RS11755;Name=C9E93_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11755;old_locus_tag=C9E93_12055 NZ_PYJV01000072.1 Protein Homology CDS 26296 27066 . - 0 ID=cds-WP_000983418.1;Parent=gene-C9E93_RS11755;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9E93_RS11755;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 27063 27989 . - . ID=gene-C9E93_RS11760;Name=C9E93_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11760;old_locus_tag=C9E93_12060 NZ_PYJV01000072.1 Protein Homology CDS 27063 27989 . - 0 ID=cds-WP_000150619.1;Parent=gene-C9E93_RS11760;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9E93_RS11760;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 28098 28760 . + . ID=gene-C9E93_RS11765;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9E93_RS11765;old_locus_tag=C9E93_12065 NZ_PYJV01000072.1 Protein Homology CDS 28098 28760 . + 0 ID=cds-WP_000651591.1;Parent=gene-C9E93_RS11765;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9E93_RS11765;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 28818 29354 . - . ID=gene-C9E93_RS11770;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9E93_RS11770;old_locus_tag=C9E93_12070 NZ_PYJV01000072.1 Protein Homology CDS 28818 29354 . - 0 ID=cds-WP_000683342.1;Parent=gene-C9E93_RS11770;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9E93_RS11770;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 29560 31950 . + . ID=gene-C9E93_RS11775;Name=C9E93_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11775;old_locus_tag=C9E93_12075 NZ_PYJV01000072.1 Protein Homology CDS 29560 31950 . + 0 ID=cds-WP_000829731.1;Parent=gene-C9E93_RS11775;Dbxref=GenBank:WP_000829731.1;Name=WP_000829731.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9E93_RS11775;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829731.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 32028 33638 . - . ID=gene-C9E93_RS11780;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9E93_RS11780;old_locus_tag=C9E93_12080 NZ_PYJV01000072.1 Protein Homology CDS 32028 33638 . - 0 ID=cds-WP_000946046.1;Parent=gene-C9E93_RS11780;Dbxref=GenBank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9E93_RS11780;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 33840 34187 . + . ID=gene-C9E93_RS11785;Name=C9E93_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11785;old_locus_tag=C9E93_12085 NZ_PYJV01000072.1 Protein Homology CDS 33840 34187 . + 0 ID=cds-WP_000846613.1;Parent=gene-C9E93_RS11785;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9E93_RS11785;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 34294 35154 . + . ID=gene-C9E93_RS11790;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9E93_RS11790;old_locus_tag=C9E93_12090 NZ_PYJV01000072.1 Protein Homology CDS 34294 35154 . + 0 ID=cds-WP_000829968.1;Parent=gene-C9E93_RS11790;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9E93_RS11790;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 35175 35969 . + . ID=gene-C9E93_RS11795;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9E93_RS11795;old_locus_tag=C9E93_12095 NZ_PYJV01000072.1 Protein Homology CDS 35175 35969 . + 0 ID=cds-WP_000734293.1;Parent=gene-C9E93_RS11795;Dbxref=GenBank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9E93_RS11795;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 35999 36766 . - . ID=gene-C9E93_RS11800;Name=C9E93_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11800;old_locus_tag=C9E93_12100 NZ_PYJV01000072.1 Protein Homology CDS 35999 36766 . - 0 ID=cds-WP_000678254.1;Parent=gene-C9E93_RS11800;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9E93_RS11800;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 36776 37759 . - . ID=gene-C9E93_RS11805;Name=C9E93_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11805;old_locus_tag=C9E93_12105 NZ_PYJV01000072.1 Protein Homology CDS 36776 37759 . - 0 ID=cds-WP_000448745.1;Parent=gene-C9E93_RS11805;Dbxref=GenBank:WP_000448745.1;Name=WP_000448745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9E93_RS11805;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448745.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 37749 39020 . - . ID=gene-C9E93_RS11810;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=C9E93_RS11810;old_locus_tag=C9E93_12110 NZ_PYJV01000072.1 Protein Homology CDS 37749 39020 . - 0 ID=cds-WP_000783302.1;Parent=gene-C9E93_RS11810;Dbxref=GenBank:WP_000783302.1;Name=WP_000783302.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9E93_RS11810;product=D-threonate kinase;protein_id=WP_000783302.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 39017 39970 . - . ID=gene-C9E93_RS11815;Name=C9E93_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11815;old_locus_tag=C9E93_12115 NZ_PYJV01000072.1 Protein Homology CDS 39017 39970 . - 0 ID=cds-WP_001022089.1;Parent=gene-C9E93_RS11815;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9E93_RS11815;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 40205 40567 . - . ID=gene-C9E93_RS11820;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9E93_RS11820;old_locus_tag=C9E93_12120 NZ_PYJV01000072.1 Protein Homology CDS 40205 40567 . - 0 ID=cds-WP_000384308.1;Parent=gene-C9E93_RS11820;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9E93_RS11820;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 40838 41161 . + . ID=gene-C9E93_RS11825;Name=C9E93_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11825;old_locus_tag=C9E93_12125 NZ_PYJV01000072.1 Protein Homology CDS 40838 41161 . + 0 ID=cds-WP_001101536.1;Parent=gene-C9E93_RS11825;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9E93_RS11825;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 41579 42043 . + . ID=gene-C9E93_RS11830;Name=C9E93_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11830;old_locus_tag=C9E93_12130 NZ_PYJV01000072.1 Protein Homology CDS 41579 42043 . + 0 ID=cds-WP_000110437.1;Parent=gene-C9E93_RS11830;Dbxref=GenBank:WP_000110437.1;Name=WP_000110437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9E93_RS11830;product=membrane protein;protein_id=WP_000110437.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 42083 44680 . - . ID=gene-C9E93_RS11835;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9E93_RS11835;old_locus_tag=C9E93_12135 NZ_PYJV01000072.1 Protein Homology CDS 42083 44680 . - 0 ID=cds-WP_023138991.1;Parent=gene-C9E93_RS11835;Dbxref=GenBank:WP_023138991.1;Name=WP_023138991.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9E93_RS11835;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_023138991.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 45069 46697 . + . ID=gene-C9E93_RS11840;Name=C9E93_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11840;old_locus_tag=C9E93_12145 NZ_PYJV01000072.1 Protein Homology CDS 45069 46697 . + 0 ID=cds-WP_135370329.1;Parent=gene-C9E93_RS11840;Dbxref=GenBank:WP_135370329.1;Name=WP_135370329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9E93_RS11840;product=DUF3300 domain-containing protein;protein_id=WP_135370329.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 46710 47501 . + . ID=gene-C9E93_RS11845;Name=C9E93_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11845;old_locus_tag=C9E93_12150 NZ_PYJV01000072.1 Protein Homology CDS 46710 47501 . + 0 ID=cds-WP_135370328.1;Parent=gene-C9E93_RS11845;Dbxref=GenBank:WP_135370328.1;Name=WP_135370328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9E93_RS11845;product=DUF2950 family protein;protein_id=WP_135370328.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 47539 47823 . - . ID=gene-C9E93_RS11850;Name=C9E93_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11850;old_locus_tag=C9E93_12155 NZ_PYJV01000072.1 Protein Homology CDS 47539 47823 . - 0 ID=cds-WP_000765363.1;Parent=gene-C9E93_RS11850;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9E93_RS11850;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 48112 49536 . - . ID=gene-C9E93_RS11855;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9E93_RS11855;old_locus_tag=C9E93_12160 NZ_PYJV01000072.1 Protein Homology CDS 48112 49536 . - 0 ID=cds-WP_135370331.1;Parent=gene-C9E93_RS11855;Dbxref=GenBank:WP_135370331.1;Name=WP_135370331.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9E93_RS11855;product=dihydrolipoyl dehydrogenase;protein_id=WP_135370331.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 49737 51626 . - . ID=gene-C9E93_RS11860;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9E93_RS11860;old_locus_tag=C9E93_12165 NZ_PYJV01000072.1 Protein Homology CDS 49737 51626 . - 0 ID=cds-WP_135370327.1;Parent=gene-C9E93_RS11860;Dbxref=GenBank:WP_135370327.1;Name=WP_135370327.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9E93_RS11860;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_135370327.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 51641 54304 . - . ID=gene-C9E93_RS11865;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9E93_RS11865;old_locus_tag=C9E93_12170 NZ_PYJV01000072.1 Protein Homology CDS 51641 54304 . - 0 ID=cds-WP_000003853.1;Parent=gene-C9E93_RS11865;Dbxref=GenBank:WP_000003853.1;Name=WP_000003853.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9E93_RS11865;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003853.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 54611 55375 . - . ID=gene-C9E93_RS11870;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9E93_RS11870;old_locus_tag=C9E93_12180 NZ_PYJV01000072.1 Protein Homology CDS 54611 55375 . - 0 ID=cds-WP_000331771.1;Parent=gene-C9E93_RS11870;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9E93_RS11870;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 55938 57311 . + . ID=gene-C9E93_RS11875;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9E93_RS11875;old_locus_tag=C9E93_12185 NZ_PYJV01000072.1 Protein Homology CDS 55938 57311 . + 0 ID=cds-WP_000969487.1;Parent=gene-C9E93_RS11875;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9E93_RS11875;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 57475 58881 . + . ID=gene-C9E93_RS11880;Name=C9E93_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11880;old_locus_tag=C9E93_12190 NZ_PYJV01000072.1 Protein Homology CDS 57475 58881 . + 0 ID=cds-WP_000357540.1;Parent=gene-C9E93_RS11880;Dbxref=GenBank:WP_000357540.1;Name=WP_000357540.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9E93_RS11880;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357540.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 58881 59831 . + . ID=gene-C9E93_RS11885;Name=C9E93_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11885;old_locus_tag=C9E93_12195 NZ_PYJV01000072.1 Protein Homology CDS 58881 59831 . + 0 ID=cds-WP_080087415.1;Parent=gene-C9E93_RS11885;Dbxref=GenBank:WP_080087415.1;Name=WP_080087415.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9E93_RS11885;product=glycoside hydrolase family 43 protein;protein_id=WP_080087415.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 59923 60777 . - . ID=gene-C9E93_RS11890;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9E93_RS11890;old_locus_tag=C9E93_12200 NZ_PYJV01000072.1 Protein Homology CDS 59923 60777 . - 0 ID=cds-WP_000172039.1;Parent=gene-C9E93_RS11890;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9E93_RS11890;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 60774 61337 . - . ID=gene-C9E93_RS11895;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9E93_RS11895;old_locus_tag=C9E93_12205 NZ_PYJV01000072.1 Protein Homology CDS 60774 61337 . - 0 ID=cds-WP_000936329.1;Parent=gene-C9E93_RS11895;Dbxref=GenBank:WP_000936329.1;Name=WP_000936329.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9E93_RS11895;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936329.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 61425 62318 . + . ID=gene-C9E93_RS11900;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9E93_RS11900;old_locus_tag=C9E93_12210 NZ_PYJV01000072.1 Protein Homology CDS 61425 62318 . + 0 ID=cds-WP_001135135.1;Parent=gene-C9E93_RS11900;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9E93_RS11900;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 62540 62977 . + . ID=gene-C9E93_RS11910;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9E93_RS11910;old_locus_tag=C9E93_12220 NZ_PYJV01000072.1 Protein Homology CDS 62540 62977 . + 0 ID=cds-WP_000414989.1;Parent=gene-C9E93_RS11910;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9E93_RS11910;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 62987 64372 . + . ID=gene-C9E93_RS11915;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9E93_RS11915;old_locus_tag=C9E93_12225 NZ_PYJV01000072.1 Protein Homology CDS 62987 64372 . + 0 ID=cds-WP_000650597.1;Parent=gene-C9E93_RS11915;Dbxref=GenBank:WP_000650597.1;Name=WP_000650597.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9E93_RS11915;product=type II secretion system protein GspE;protein_id=WP_000650597.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 64362 65564 . + . ID=gene-C9E93_RS11920;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9E93_RS11920;old_locus_tag=C9E93_12230 NZ_PYJV01000072.1 Protein Homology CDS 64362 65564 . + 0 ID=cds-WP_135370177.1;Parent=gene-C9E93_RS11920;Dbxref=GenBank:WP_135370177.1;Name=WP_135370177.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9E93_RS11920;product=protein transport protein HofC;protein_id=WP_135370177.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 65595 66638 . - . ID=gene-C9E93_RS11925;Name=C9E93_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11925;old_locus_tag=C9E93_12235 NZ_PYJV01000072.1 Protein Homology CDS 65595 66638 . - 0 ID=cds-WP_001217365.1;Parent=gene-C9E93_RS11925;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=C9E93_RS11925;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 66864 67484 . + . ID=gene-C9E93_RS11930;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9E93_RS11930;old_locus_tag=C9E93_12240 NZ_PYJV01000072.1 Protein Homology CDS 66864 67484 . + 0 ID=cds-WP_001270913.1;Parent=gene-C9E93_RS11930;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9E93_RS11930;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 67484 68227 . + . ID=gene-C9E93_RS11935;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9E93_RS11935;old_locus_tag=C9E93_12245 NZ_PYJV01000072.1 Protein Homology CDS 67484 68227 . + 0 ID=cds-WP_000557441.1;Parent=gene-C9E93_RS11935;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9E93_RS11935;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 68237 68428 . + . ID=gene-C9E93_RS11940;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9E93_RS11940;old_locus_tag=C9E93_12250 NZ_PYJV01000072.1 Protein Homology CDS 68237 68428 . + 0 ID=cds-WP_001286419.1;Parent=gene-C9E93_RS11940;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9E93_RS11940;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 68425 69366 . - . ID=gene-C9E93_RS11945;Name=C9E93_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11945;old_locus_tag=C9E93_12255 NZ_PYJV01000072.1 Protein Homology CDS 68425 69366 . - 0 ID=cds-WP_001538994.1;Parent=gene-C9E93_RS11945;Dbxref=GenBank:WP_001538994.1;Name=WP_001538994.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9E93_RS11945;product=LysR family transcriptional regulator;protein_id=WP_001538994.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 69452 70441 . + . ID=gene-C9E93_RS11950;Name=C9E93_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11950;old_locus_tag=C9E93_12260 NZ_PYJV01000072.1 Protein Homology CDS 69452 70441 . + 0 ID=cds-WP_001200034.1;Parent=gene-C9E93_RS11950;Dbxref=GenBank:WP_001200034.1;Name=WP_001200034.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9E93_RS11950;product=aldo/keto reductase;protein_id=WP_001200034.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 70475 70870 . - . ID=gene-C9E93_RS11955;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9E93_RS11955;old_locus_tag=C9E93_12265 NZ_PYJV01000072.1 Protein Homology CDS 70475 70870 . - 0 ID=cds-WP_135370178.1;Parent=gene-C9E93_RS11955;Dbxref=GenBank:WP_135370178.1;Name=WP_135370178.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=C9E93_RS11955;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_135370178.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 71026 73731 . - . ID=gene-C9E93_RS11960;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9E93_RS11960;old_locus_tag=C9E93_12270 NZ_PYJV01000072.1 Protein Homology CDS 71026 73731 . - 0 ID=cds-WP_135370179.1;Parent=gene-C9E93_RS11960;Dbxref=GenBank:WP_135370179.1;Name=WP_135370179.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9E93_RS11960;product=preprotein translocase subunit SecA;protein_id=WP_135370179.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 73793 74290 . - . ID=gene-C9E93_RS11965;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9E93_RS11965;old_locus_tag=C9E93_12275 NZ_PYJV01000072.1 Protein Homology CDS 73793 74290 . - 0 ID=cds-WP_000014336.1;Parent=gene-C9E93_RS11965;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9E93_RS11965;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 74568 75485 . - . ID=gene-C9E93_RS11970;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9E93_RS11970;old_locus_tag=C9E93_12280 NZ_PYJV01000072.1 Protein Homology CDS 74568 75485 . - 0 ID=cds-WP_000595487.1;Parent=gene-C9E93_RS11970;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9E93_RS11970;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 75586 76737 . - . ID=gene-C9E93_RS11975;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9E93_RS11975;old_locus_tag=C9E93_12285 NZ_PYJV01000072.1 Protein Homology CDS 75586 76737 . - 0 ID=cds-WP_000462785.1;Parent=gene-C9E93_RS11975;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9E93_RS11975;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 76798 78060 . - . ID=gene-C9E93_RS11980;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9E93_RS11980;old_locus_tag=C9E93_12290 NZ_PYJV01000072.1 Protein Homology CDS 76798 78060 . - 0 ID=cds-WP_000588463.1;Parent=gene-C9E93_RS11980;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9E93_RS11980;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 78057 78887 . - . ID=gene-C9E93_RS11985;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9E93_RS11985;old_locus_tag=C9E93_12295 NZ_PYJV01000072.1 Protein Homology CDS 78057 78887 . - 0 ID=cds-WP_000075728.1;Parent=gene-C9E93_RS11985;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9E93_RS11985;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 78889 79809 . - . ID=gene-C9E93_RS11990;Name=C9E93_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS11990;old_locus_tag=C9E93_12300 NZ_PYJV01000072.1 Protein Homology CDS 78889 79809 . - 0 ID=cds-WP_000763905.1;Parent=gene-C9E93_RS11990;Dbxref=GenBank:WP_000763905.1;Name=WP_000763905.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9E93_RS11990;product=D-alanine--D-alanine ligase;protein_id=WP_000763905.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 79802 81277 . - . ID=gene-C9E93_RS11995;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9E93_RS11995;old_locus_tag=C9E93_12305 NZ_PYJV01000072.1 Protein Homology CDS 79802 81277 . - 0 ID=cds-WP_001096070.1;Parent=gene-C9E93_RS11995;Dbxref=GenBank:WP_001096070.1;Name=WP_001096070.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9E93_RS11995;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096070.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 81396 82463 . - . ID=gene-C9E93_RS12000;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9E93_RS12000;old_locus_tag=C9E93_12310 NZ_PYJV01000072.1 Protein Homology CDS 81396 82463 . - 0 ID=cds-WP_000016619.1;Parent=gene-C9E93_RS12000;Dbxref=GenBank:WP_000016619.1;Name=WP_000016619.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9E93_RS12000;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016619.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 82460 83704 . - . ID=gene-C9E93_RS12005;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9E93_RS12005;old_locus_tag=C9E93_12315 NZ_PYJV01000072.1 Protein Homology CDS 82460 83704 . - 0 ID=cds-WP_001239803.1;Parent=gene-C9E93_RS12005;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9E93_RS12005;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 83704 85020 . - . ID=gene-C9E93_RS12010;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9E93_RS12010;old_locus_tag=C9E93_12320 NZ_PYJV01000072.1 Protein Homology CDS 83704 85020 . - 0 ID=cds-WP_000796445.1;Parent=gene-C9E93_RS12010;Dbxref=GenBank:WP_000796445.1;Name=WP_000796445.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9E93_RS12010;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796445.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 85023 86105 . - . ID=gene-C9E93_RS12015;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=C9E93_RS12015;old_locus_tag=C9E93_12325 NZ_PYJV01000072.1 Protein Homology CDS 85023 86105 . - 0 ID=cds-WP_000964138.1;Parent=gene-C9E93_RS12015;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9E93_RS12015;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 86099 87457 . - . ID=gene-C9E93_RS12020;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9E93_RS12020;old_locus_tag=C9E93_12330 NZ_PYJV01000072.1 Protein Homology CDS 86099 87457 . - 0 ID=cds-WP_079839730.1;Parent=gene-C9E93_RS12020;Dbxref=GenBank:WP_079839730.1;Name=WP_079839730.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9E93_RS12020;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_079839730.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 87454 88941 . - . ID=gene-C9E93_RS12025;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9E93_RS12025;old_locus_tag=C9E93_12335 NZ_PYJV01000072.1 Protein Homology CDS 87454 88941 . - 0 ID=cds-WP_001748924.1;Parent=gene-C9E93_RS12025;Dbxref=GenBank:WP_001748924.1;Name=WP_001748924.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9E93_RS12025;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_001748924.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 88928 90694 . - . ID=gene-C9E93_RS12030;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E93_RS12030;old_locus_tag=C9E93_12340 NZ_PYJV01000072.1 Protein Homology CDS 88928 90694 . - 0 ID=cds-WP_000642235.1;Parent=gene-C9E93_RS12030;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9E93_RS12030;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 90710 91075 . - . ID=gene-C9E93_RS12035;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9E93_RS12035;old_locus_tag=C9E93_12345 NZ_PYJV01000072.1 Protein Homology CDS 90710 91075 . - 0 ID=cds-WP_000625651.1;Parent=gene-C9E93_RS12035;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9E93_RS12035;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 91072 92013 . - . ID=gene-C9E93_RS12040;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9E93_RS12040;old_locus_tag=C9E93_12350 NZ_PYJV01000072.1 Protein Homology CDS 91072 92013 . - 0 ID=cds-WP_000970433.1;Parent=gene-C9E93_RS12040;Dbxref=GenBank:WP_000970433.1;Name=WP_000970433.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9E93_RS12040;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970433.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 92015 92473 . - . ID=gene-C9E93_RS12045;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9E93_RS12045;old_locus_tag=C9E93_12355 NZ_PYJV01000072.1 Protein Homology CDS 92015 92473 . - 0 ID=cds-WP_000488294.1;Parent=gene-C9E93_RS12045;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9E93_RS12045;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 93079 94083 . - . ID=gene-C9E93_RS12050;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9E93_RS12050;old_locus_tag=C9E93_12360 NZ_PYJV01000072.1 Protein Homology CDS 93079 94083 . - 0 ID=cds-WP_000762406.1;Parent=gene-C9E93_RS12050;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9E93_RS12050;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 94368 94859 . - . ID=gene-C9E93_RS12055;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E93_RS12055;old_locus_tag=C9E93_12365 NZ_PYJV01000072.1 Protein Homology CDS 94368 94859 . - 0 ID=cds-WP_001563086.1;Parent=gene-C9E93_RS12055;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9E93_RS12055;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 94862 96586 . - . ID=gene-C9E93_RS12060;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9E93_RS12060;old_locus_tag=C9E93_12370 NZ_PYJV01000072.1 Protein Homology CDS 94862 96586 . - 0 ID=cds-WP_001748923.1;Parent=gene-C9E93_RS12060;Dbxref=GenBank:WP_001748923.1;Name=WP_001748923.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9E93_RS12060;product=acetolactate synthase 3 large subunit;protein_id=WP_001748923.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 96908 97852 . - . ID=gene-C9E93_RS12065;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9E93_RS12065;old_locus_tag=C9E93_12375 NZ_PYJV01000072.1 Protein Homology CDS 96908 97852 . - 0 ID=cds-WP_001115420.1;Parent=gene-C9E93_RS12065;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9E93_RS12065;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 98509 98595 . + . ID=gene-C9E93_RS12070;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9E93_RS12070;old_locus_tag=C9E93_12380 NZ_PYJV01000072.1 Protein Homology CDS 98509 98595 . + 0 ID=cds-WP_001575587.1;Parent=gene-C9E93_RS12070;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9E93_RS12070;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 98683 100254 . + . ID=gene-C9E93_RS12075;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=C9E93_RS12075;old_locus_tag=C9E93_12385 NZ_PYJV01000072.1 Protein Homology CDS 98683 100254 . + 0 ID=cds-WP_000082819.1;Parent=gene-C9E93_RS12075;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9E93_RS12075;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 100254 101345 . + . ID=gene-C9E93_RS12080;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9E93_RS12080;old_locus_tag=C9E93_12390 NZ_PYJV01000072.1 Protein Homology CDS 100254 101345 . + 0 ID=cds-WP_000042325.1;Parent=gene-C9E93_RS12080;Dbxref=GenBank:WP_000042325.1;Name=WP_000042325.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9E93_RS12080;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042325.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 101348 102748 . + . ID=gene-C9E93_RS12085;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E93_RS12085;old_locus_tag=C9E93_12395 NZ_PYJV01000072.1 Protein Homology CDS 101348 102748 . + 0 ID=cds-WP_001140626.1;Parent=gene-C9E93_RS12085;Dbxref=GenBank:WP_001140626.1;Name=WP_001140626.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9E93_RS12085;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140626.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 102759 103364 . + . ID=gene-C9E93_RS12090;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E93_RS12090;old_locus_tag=C9E93_12400 NZ_PYJV01000072.1 Protein Homology CDS 102759 103364 . + 0 ID=cds-WP_000818267.1;Parent=gene-C9E93_RS12090;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9E93_RS12090;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 103700 103822 . - . ID=gene-C9E93_RS12095;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=C9E93_RS12095;old_locus_tag=C9E93_12405 NZ_PYJV01000072.1 Protein Homology CDS 103700 103822 . - 0 ID=cds-WP_000553886.1;Parent=gene-C9E93_RS12095;Dbxref=GenBank:WP_000553886.1;Name=WP_000553886.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9E93_RS12095;product=glucose uptake inhibitor SgrT;protein_id=WP_000553886.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 103915 105573 . + . ID=gene-C9E93_RS12100;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9E93_RS12100;old_locus_tag=C9E93_12410 NZ_PYJV01000072.1 Protein Homology CDS 103915 105573 . + 0 ID=cds-WP_039513877.1;Parent=gene-C9E93_RS12100;Dbxref=GenBank:WP_039513877.1;Name=WP_039513877.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9E93_RS12100;product=HTH-type transcriptional regulator SgrR;protein_id=WP_039513877.1;transl_table=11 NZ_PYJV01000072.1 cmsearch riboswitch 105620 105719 . + . ID=id-NZ_PYJV01000072.1:105620..105719;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000072.1 RefSeq gene 105751 106734 . + . ID=gene-C9E93_RS12105;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9E93_RS12105;old_locus_tag=C9E93_12415 NZ_PYJV01000072.1 Protein Homology CDS 105751 106734 . + 0 ID=cds-WP_135370104.1;Parent=gene-C9E93_RS12105;Dbxref=GenBank:WP_135370104.1;Name=WP_135370104.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9E93_RS12105;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_135370104.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 106710 108320 . + . ID=gene-C9E93_RS12110;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9E93_RS12110;old_locus_tag=C9E93_12420 NZ_PYJV01000072.1 Protein Homology CDS 106710 108320 . + 0 ID=cds-WP_000235635.1;Parent=gene-C9E93_RS12110;Dbxref=GenBank:WP_000235635.1;Name=WP_000235635.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9E93_RS12110;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235635.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 108304 109011 . + . ID=gene-C9E93_RS12115;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9E93_RS12115;old_locus_tag=C9E93_12425 NZ_PYJV01000072.1 Protein Homology CDS 108304 109011 . + 0 ID=cds-WP_000915976.1;Parent=gene-C9E93_RS12115;Dbxref=GenBank:WP_000915976.1;Name=WP_000915976.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9E93_RS12115;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915976.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 109050 109817 . - . ID=gene-C9E93_RS12120;Name=C9E93_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12120;old_locus_tag=C9E93_12430 NZ_PYJV01000072.1 Protein Homology CDS 109050 109817 . - 0 ID=cds-WP_001148369.1;Parent=gene-C9E93_RS12120;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9E93_RS12120;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 109936 110781 . - . ID=gene-C9E93_RS12125;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9E93_RS12125;old_locus_tag=C9E93_12435 NZ_PYJV01000072.1 Protein Homology CDS 109936 110781 . - 0 ID=cds-WP_000852387.1;Parent=gene-C9E93_RS12125;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9E93_RS12125;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 111122 112831 . + . ID=gene-C9E93_RS12130;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9E93_RS12130;old_locus_tag=C9E93_12440 NZ_PYJV01000072.1 Protein Homology CDS 111122 112831 . + 0 ID=cds-WP_023243395.1;Parent=gene-C9E93_RS12130;Dbxref=GenBank:WP_023243395.1;Name=WP_023243395.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9E93_RS12130;product=ribulokinase;protein_id=WP_023243395.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 112842 114344 . + . ID=gene-C9E93_RS12135;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9E93_RS12135;old_locus_tag=C9E93_12445 NZ_PYJV01000072.1 Protein Homology CDS 112842 114344 . + 0 ID=cds-WP_052934887.1;Parent=gene-C9E93_RS12135;Dbxref=GenBank:WP_052934887.1;Name=WP_052934887.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9E93_RS12135;product=L-arabinose isomerase;protein_id=WP_052934887.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 114485 115180 . + . ID=gene-C9E93_RS12140;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E93_RS12140;old_locus_tag=C9E93_12450 NZ_PYJV01000072.1 Protein Homology CDS 114485 115180 . + 0 ID=cds-WP_000888682.1;Parent=gene-C9E93_RS12140;Dbxref=GenBank:WP_000888682.1;Name=WP_000888682.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9E93_RS12140;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888682.1;transl_table=11 NZ_PYJV01000072.1 RefSeq pseudogene 115186 115401 . - . ID=gene-C9E93_RS12145;Name=C9E93_RS12145;end_range=115401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS12145;old_locus_tag=C9E93_12455;partial=true;pseudo=true NZ_PYJV01000072.1 Protein Homology CDS 115186 115401 . - 0 ID=cds-C9E93_RS12145;Parent=gene-C9E93_RS12145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=115401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9E93_RS12145;partial=true;product=DUF4751 family protein;pseudo=true;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 115467 116672 . - . ID=gene-C9E93_RS12150;Name=C9E93_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS12150;old_locus_tag=C9E93_12460 NZ_PYJV01000072.1 Protein Homology CDS 115467 116672 . - 0 ID=cds-WP_167851651.1;Parent=gene-C9E93_RS12150;Dbxref=GenBank:WP_167851651.1;Name=WP_167851651.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=C9E93_RS12150;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_167851651.1;transl_table=11 NZ_PYJV01000072.1 RefSeq gene 116731 117135 . + . ID=gene-C9E93_RS12155;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9E93_RS12155;old_locus_tag=C9E93_12465 NZ_PYJV01000072.1 Protein Homology CDS 116731 117135 . + 0 ID=cds-WP_001169102.1;Parent=gene-C9E93_RS12155;Dbxref=GenBank:WP_001169102.1;Name=WP_001169102.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=C9E93_RS12155;product=IS200/IS605 family transposase;protein_id=WP_001169102.1;transl_table=11 NZ_PYJV01000072.1 RefSeq pseudogene 117208 117423 . - . ID=gene-C9E93_RS12160;Name=C9E93_RS12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS12160;old_locus_tag=C9E93_12470;partial=true;pseudo=true;start_range=.,117208 NZ_PYJV01000072.1 Protein Homology CDS 117208 117423 . - 0 ID=cds-C9E93_RS12160;Parent=gene-C9E93_RS12160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9E93_RS12160;partial=true;product=DUF4751 family protein;pseudo=true;start_range=.,117208;transl_table=11 ##sequence-region NZ_PYJV01000101.1 1 10709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000101.1 RefSeq region 1 10709 . + . ID=NZ_PYJV01000101.1:1..10709;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000101.1 RefSeq gene 513 1334 . - . ID=gene-C9E93_RS18345;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9E93_RS18345;old_locus_tag=C9E93_18830 NZ_PYJV01000101.1 Protein Homology CDS 513 1334 . - 0 ID=cds-WP_058108258.1;Parent=gene-C9E93_RS18345;Dbxref=GenBank:WP_058108258.1;Name=WP_058108258.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9E93_RS18345;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_058108258.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 1514 2422 . - . ID=gene-C9E93_RS18350;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E93_RS18350;old_locus_tag=C9E93_18835 NZ_PYJV01000101.1 Protein Homology CDS 1514 2422 . - 0 ID=cds-WP_001103238.1;Parent=gene-C9E93_RS18350;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9E93_RS18350;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 2400 2951 . - . ID=gene-C9E93_RS18355;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E93_RS18355;old_locus_tag=C9E93_18840 NZ_PYJV01000101.1 Protein Homology CDS 2400 2951 . - 0 ID=cds-WP_000679050.1;Parent=gene-C9E93_RS18355;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9E93_RS18355;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 2951 4471 . - . ID=gene-C9E93_RS18360;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E93_RS18360;old_locus_tag=C9E93_18845 NZ_PYJV01000101.1 Protein Homology CDS 2951 4471 . - 0 ID=cds-WP_000665574.1;Parent=gene-C9E93_RS18360;Dbxref=GenBank:WP_000665574.1;Name=WP_000665574.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9E93_RS18360;product=citrate lyase subunit alpha;protein_id=WP_000665574.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 4482 5351 . - . ID=gene-C9E93_RS18365;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E93_RS18365;old_locus_tag=C9E93_18850 NZ_PYJV01000101.1 Protein Homology CDS 4482 5351 . - 0 ID=cds-WP_001247811.1;Parent=gene-C9E93_RS18365;Dbxref=GenBank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9E93_RS18365;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 5348 5641 . - . ID=gene-C9E93_RS18370;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E93_RS18370;old_locus_tag=C9E93_18855 NZ_PYJV01000101.1 Protein Homology CDS 5348 5641 . - 0 ID=cds-WP_000691461.1;Parent=gene-C9E93_RS18370;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9E93_RS18370;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 5671 6714 . - . ID=gene-C9E93_RS18375;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E93_RS18375;old_locus_tag=C9E93_18860 NZ_PYJV01000101.1 Protein Homology CDS 5671 6714 . - 0 ID=cds-WP_001181445.1;Parent=gene-C9E93_RS18375;Dbxref=GenBank:WP_001181445.1;Name=WP_001181445.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9E93_RS18375;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_001181445.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 6959 8299 . + . ID=gene-C9E93_RS18380;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9E93_RS18380;old_locus_tag=C9E93_18865 NZ_PYJV01000101.1 Protein Homology CDS 6959 8299 . + 0 ID=cds-WP_000183602.1;Parent=gene-C9E93_RS18380;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9E93_RS18380;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 8458 8697 . + . ID=gene-C9E93_RS18385;Name=C9E93_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18385;old_locus_tag=C9E93_18870 NZ_PYJV01000101.1 Protein Homology CDS 8458 8697 . + 0 ID=cds-WP_001001154.1;Parent=gene-C9E93_RS18385;Dbxref=GenBank:WP_001001154.1;Name=WP_001001154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9E93_RS18385;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001154.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 8714 10489 . + . ID=gene-C9E93_RS18390;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9E93_RS18390;old_locus_tag=C9E93_18875 NZ_PYJV01000101.1 Protein Homology CDS 8714 10489 . + 0 ID=cds-WP_135400629.1;Parent=gene-C9E93_RS18390;Dbxref=GenBank:WP_135400629.1;Name=WP_135400629.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E93_RS18390;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_135400629.1;transl_table=11 NZ_PYJV01000101.1 RefSeq gene 10502 10709 . + . ID=gene-C9E93_RS18395;Name=C9E93_RS18395;end_range=10709,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18395;old_locus_tag=C9E93_18880;partial=true NZ_PYJV01000101.1 Protein Homology CDS 10502 10709 . + 0 ID=cds-WP_173644059.1;Parent=gene-C9E93_RS18395;Dbxref=GenBank:WP_173644059.1;Name=WP_173644059.1;Ontology_term=GO:0006814,GO:0016829;end_range=10709,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E93_RS18395;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_173644059.1;transl_table=11 ##sequence-region NZ_PYJV01000011.1 1 10535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000011.1 RefSeq region 1 10535 . + . ID=NZ_PYJV01000011.1:1..10535;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000011.1 RefSeq gene 1 153 . + . ID=gene-C9E93_RS00680;Name=C9E93_RS00680;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS00680;old_locus_tag=C9E93_00740;partial=true;start_range=.,1 NZ_PYJV01000011.1 cmsearch ncRNA 1 153 . + . ID=rna-C9E93_RS00680;Parent=gene-C9E93_RS00680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00680;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJV01000011.1 cmsearch exon 1 153 . + . ID=exon-C9E93_RS00680-1;Parent=rna-C9E93_RS00680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00680;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJV01000011.1 RefSeq gene 188 263 . + . ID=gene-C9E93_RS00685;Name=C9E93_RS00685;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS00685;old_locus_tag=C9E93_00745 NZ_PYJV01000011.1 tRNAscan-SE tRNA 188 263 . + . ID=rna-C9E93_RS00685;Parent=gene-C9E93_RS00685;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00685;product=tRNA-Lys NZ_PYJV01000011.1 tRNAscan-SE exon 188 263 . + . ID=exon-C9E93_RS00685-1;Parent=rna-C9E93_RS00685;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS00685;product=tRNA-Lys NZ_PYJV01000011.1 RefSeq gene 293 418 . + . ID=gene-C9E93_RS00690;Name=C9E93_RS00690;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS00690;old_locus_tag=C9E93_00750 NZ_PYJV01000011.1 cmsearch ncRNA 293 418 . + . ID=rna-C9E93_RS00690;Parent=gene-C9E93_RS00690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00690;product=RtT sRNA NZ_PYJV01000011.1 cmsearch exon 293 418 . + . ID=exon-C9E93_RS00690-1;Parent=rna-C9E93_RS00690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00690;product=RtT sRNA NZ_PYJV01000011.1 RefSeq gene 448 572 . + . ID=gene-C9E93_RS00695;Name=C9E93_RS00695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS00695;old_locus_tag=C9E93_00755 NZ_PYJV01000011.1 cmsearch ncRNA 448 572 . + . ID=rna-C9E93_RS00695;Parent=gene-C9E93_RS00695;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00695;product=RtT sRNA NZ_PYJV01000011.1 cmsearch exon 448 572 . + . ID=exon-C9E93_RS00695-1;Parent=rna-C9E93_RS00695;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS00695;product=RtT sRNA NZ_PYJV01000011.1 RefSeq gene 867 1910 . + . ID=gene-C9E93_RS00700;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9E93_RS00700;old_locus_tag=C9E93_00760 NZ_PYJV01000011.1 Protein Homology CDS 867 1910 . + 0 ID=cds-WP_001749102.1;Parent=gene-C9E93_RS00700;Dbxref=GenBank:WP_001749102.1;Name=WP_001749102.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9E93_RS00700;product=quinolinate synthase NadA;protein_id=WP_001749102.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 1935 2654 . + . ID=gene-C9E93_RS00705;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9E93_RS00705;old_locus_tag=C9E93_00765 NZ_PYJV01000011.1 Protein Homology CDS 1935 2654 . + 0 ID=cds-WP_000345368.1;Parent=gene-C9E93_RS00705;Dbxref=GenBank:WP_000345368.1;Name=WP_000345368.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9E93_RS00705;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345368.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 2651 3589 . - . ID=gene-C9E93_RS00710;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9E93_RS00710;old_locus_tag=C9E93_00770 NZ_PYJV01000011.1 Protein Homology CDS 2651 3589 . - 0 ID=cds-WP_000951239.1;Parent=gene-C9E93_RS00710;Dbxref=GenBank:WP_000951239.1;Name=WP_000951239.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9E93_RS00710;product=CDF family zinc transporter ZitB;protein_id=WP_000951239.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 3700 4086 . - . ID=gene-C9E93_RS00715;Name=C9E93_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00715;old_locus_tag=C9E93_00775 NZ_PYJV01000011.1 Protein Homology CDS 3700 4086 . - 0 ID=cds-WP_000784380.1;Parent=gene-C9E93_RS00715;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9E93_RS00715;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 4406 5458 . + . ID=gene-C9E93_RS00720;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=C9E93_RS00720;old_locus_tag=C9E93_00780 NZ_PYJV01000011.1 Protein Homology CDS 4406 5458 . + 0 ID=cds-WP_001109233.1;Parent=gene-C9E93_RS00720;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9E93_RS00720;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 5552 6097 . - . ID=gene-C9E93_RS00725;Name=C9E93_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00725;old_locus_tag=C9E93_00785 NZ_PYJV01000011.1 Protein Homology CDS 5552 6097 . - 0 ID=cds-WP_000970374.1;Parent=gene-C9E93_RS00725;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9E93_RS00725;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 6112 6957 . - . ID=gene-C9E93_RS00730;Name=C9E93_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00730;old_locus_tag=C9E93_00790 NZ_PYJV01000011.1 Protein Homology CDS 6112 6957 . - 0 ID=cds-WP_000086831.1;Parent=gene-C9E93_RS00730;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9E93_RS00730;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 7087 7977 . + . ID=gene-C9E93_RS00735;Name=C9E93_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00735;old_locus_tag=C9E93_00795 NZ_PYJV01000011.1 Protein Homology CDS 7087 7977 . + 0 ID=cds-WP_000405927.1;Parent=gene-C9E93_RS00735;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9E93_RS00735;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 7978 8961 . - . ID=gene-C9E93_RS00740;Name=C9E93_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00740;old_locus_tag=C9E93_00800 NZ_PYJV01000011.1 Protein Homology CDS 7978 8961 . - 0 ID=cds-WP_000282119.1;Parent=gene-C9E93_RS00740;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9E93_RS00740;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_PYJV01000011.1 RefSeq gene 9184 10452 . + . ID=gene-C9E93_RS00745;Name=C9E93_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00745;old_locus_tag=C9E93_00805 NZ_PYJV01000011.1 Protein Homology CDS 9184 10452 . + 0 ID=cds-WP_000074129.1;Parent=gene-C9E93_RS00745;Dbxref=GenBank:WP_000074129.1;Name=WP_000074129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9E93_RS00745;product=SLC13 family permease;protein_id=WP_000074129.1;transl_table=11 ##sequence-region NZ_PYJV01000119.1 1 9950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000119.1 RefSeq region 1 9950 . + . ID=NZ_PYJV01000119.1:1..9950;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000119.1 RefSeq gene 273 488 . + . ID=gene-C9E93_RS21710;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9E93_RS21710;old_locus_tag=C9E93_22285 NZ_PYJV01000119.1 Protein Homology CDS 273 488 . + 0 ID=cds-WP_000495700.1;Parent=gene-C9E93_RS21710;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9E93_RS21710;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 583 726 . + . ID=gene-C9E93_RS21715;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9E93_RS21715;old_locus_tag=C9E93_22290 NZ_PYJV01000119.1 Protein Homology CDS 583 726 . + 0 ID=cds-WP_000841559.1;Parent=gene-C9E93_RS21715;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9E93_RS21715;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 903 2600 . + . ID=gene-C9E93_RS21720;Name=C9E93_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21720;old_locus_tag=C9E93_22295 NZ_PYJV01000119.1 Protein Homology CDS 903 2600 . + 0 ID=cds-WP_000450511.1;Parent=gene-C9E93_RS21720;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9E93_RS21720;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 2882 3892 . + . ID=gene-C9E93_RS21725;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9E93_RS21725;old_locus_tag=C9E93_22300 NZ_PYJV01000119.1 Protein Homology CDS 2882 3892 . + 0 ID=cds-WP_000642447.1;Parent=gene-C9E93_RS21725;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9E93_RS21725;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 3986 4642 . - . ID=gene-C9E93_RS21730;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9E93_RS21730;old_locus_tag=C9E93_22305 NZ_PYJV01000119.1 Protein Homology CDS 3986 4642 . - 0 ID=cds-WP_000045657.1;Parent=gene-C9E93_RS21730;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9E93_RS21730;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 4635 5519 . - . ID=gene-C9E93_RS21735;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E93_RS21735;old_locus_tag=C9E93_22310 NZ_PYJV01000119.1 Protein Homology CDS 4635 5519 . - 0 ID=cds-WP_135369920.1;Parent=gene-C9E93_RS21735;Dbxref=GenBank:WP_135369920.1;Name=WP_135369920.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9E93_RS21735;product=formate dehydrogenase subunit beta;protein_id=WP_135369920.1;transl_table=11 NZ_PYJV01000119.1 RefSeq gene 5533 8580 . - . ID=gene-C9E93_RS21740;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E93_RS21740;old_locus_tag=C9E93_22315 NZ_PYJV01000119.1 Protein Homology CDS 5533 8580 . - 0 ID=cds-WP_001574320.1;Parent=gene-C9E93_RS21740;Dbxref=GenBank:WP_001574320.1;Name=WP_001574320.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9E93_RS21740;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001574320.1;transl_except=(pos:complement(7993..7995)%2Caa:Sec);transl_table=11 NZ_PYJV01000119.1 RefSeq gene 8858 9739 . + . ID=gene-C9E93_RS21745;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=C9E93_RS21745;old_locus_tag=C9E93_22320 NZ_PYJV01000119.1 Protein Homology CDS 8858 9739 . + 0 ID=cds-WP_038393853.1;Parent=gene-C9E93_RS21745;Dbxref=GenBank:WP_038393853.1;Name=WP_038393853.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9E93_RS21745;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_038393853.1;transl_table=11 ##sequence-region NZ_PYJV01000060.1 1 9374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000060.1 RefSeq region 1 9374 . + . ID=NZ_PYJV01000060.1:1..9374;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000060.1 RefSeq gene 1 188 . + . ID=gene-C9E93_RS09715;Name=C9E93_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09715;old_locus_tag=C9E93_09965;partial=true;start_range=.,1 NZ_PYJV01000060.1 Protein Homology CDS 1 188 . + 2 ID=cds-WP_135369081.1;Parent=gene-C9E93_RS09715;Dbxref=GenBank:WP_135369081.1;Name=WP_135369081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E93_RS09715;partial=true;product=hypothetical protein;protein_id=WP_135369081.1;start_range=.,1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 385 1002 . - . ID=gene-C9E93_RS09720;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9E93_RS09720;old_locus_tag=C9E93_09970 NZ_PYJV01000060.1 Protein Homology CDS 385 1002 . - 0 ID=cds-WP_000068097.1;Parent=gene-C9E93_RS09720;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9E93_RS09720;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 1666 2079 . + . ID=gene-C9E93_RS09725;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9E93_RS09725;old_locus_tag=C9E93_09975 NZ_PYJV01000060.1 Protein Homology CDS 1666 2079 . + 0 ID=cds-WP_001287383.1;Parent=gene-C9E93_RS09725;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9E93_RS09725;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 2211 3119 . - . ID=gene-C9E93_RS09730;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9E93_RS09730;old_locus_tag=C9E93_09980 NZ_PYJV01000060.1 Protein Homology CDS 2211 3119 . - 0 ID=cds-WP_000729451.1;Parent=gene-C9E93_RS09730;Dbxref=GenBank:WP_000729451.1;Name=WP_000729451.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9E93_RS09730;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729451.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 3322 4335 . - . ID=gene-C9E93_RS09735;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9E93_RS09735;old_locus_tag=C9E93_09985 NZ_PYJV01000060.1 Protein Homology CDS 3322 4335 . - 0 ID=cds-WP_000193432.1;Parent=gene-C9E93_RS09735;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9E93_RS09735;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 4426 5331 . - . ID=gene-C9E93_RS09740;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9E93_RS09740;old_locus_tag=C9E93_09990 NZ_PYJV01000060.1 Protein Homology CDS 4426 5331 . - 0 ID=cds-WP_001230572.1;Parent=gene-C9E93_RS09740;Dbxref=GenBank:WP_001230572.1;Name=WP_001230572.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9E93_RS09740;product=patatin-like phospholipase RssA;protein_id=WP_001230572.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 5442 5900 . + . ID=gene-C9E93_RS09745;Name=C9E93_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09745;old_locus_tag=C9E93_09995 NZ_PYJV01000060.1 Protein Homology CDS 5442 5900 . + 0 ID=cds-WP_001682412.1;Parent=gene-C9E93_RS09745;Dbxref=GenBank:WP_001682412.1;Name=WP_001682412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9E93_RS09745;product=YchJ family protein;protein_id=WP_001682412.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 5951 6793 . + . ID=gene-C9E93_RS09750;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9E93_RS09750;old_locus_tag=C9E93_10000 NZ_PYJV01000060.1 Protein Homology CDS 5951 6793 . + 0 ID=cds-WP_001191156.1;Parent=gene-C9E93_RS09750;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9E93_RS09750;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_PYJV01000060.1 RefSeq gene 6963 7103 . + . ID=gene-C9E93_RS09755;Name=C9E93_RS09755;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS09755;old_locus_tag=C9E93_10005 NZ_PYJV01000060.1 cmsearch ncRNA 6963 7103 . + . ID=rna-C9E93_RS09755;Parent=gene-C9E93_RS09755;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09755;product=RtT sRNA NZ_PYJV01000060.1 cmsearch exon 6963 7103 . + . ID=exon-C9E93_RS09755-1;Parent=rna-C9E93_RS09755;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09755;product=RtT sRNA NZ_PYJV01000060.1 RefSeq gene 7134 7218 . + . ID=gene-C9E93_RS09760;Name=C9E93_RS09760;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09760;old_locus_tag=C9E93_10010 NZ_PYJV01000060.1 tRNAscan-SE tRNA 7134 7218 . + . ID=rna-C9E93_RS09760;Parent=gene-C9E93_RS09760;anticodon=(pos:7168..7170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09760;product=tRNA-Tyr NZ_PYJV01000060.1 tRNAscan-SE exon 7134 7218 . + . ID=exon-C9E93_RS09760-1;Parent=rna-C9E93_RS09760;anticodon=(pos:7168..7170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09760;product=tRNA-Tyr NZ_PYJV01000060.1 RefSeq gene 7263 7394 . + . ID=gene-C9E93_RS09765;Name=C9E93_RS09765;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS09765;old_locus_tag=C9E93_10015 NZ_PYJV01000060.1 cmsearch ncRNA 7263 7394 . + . ID=rna-C9E93_RS09765;Parent=gene-C9E93_RS09765;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09765;product=RtT sRNA NZ_PYJV01000060.1 cmsearch exon 7263 7394 . + . ID=exon-C9E93_RS09765-1;Parent=rna-C9E93_RS09765;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09765;product=RtT sRNA NZ_PYJV01000060.1 RefSeq gene 7429 7513 . + . ID=gene-C9E93_RS09770;Name=C9E93_RS09770;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS09770;old_locus_tag=C9E93_10020 NZ_PYJV01000060.1 tRNAscan-SE tRNA 7429 7513 . + . ID=rna-C9E93_RS09770;Parent=gene-C9E93_RS09770;anticodon=(pos:7463..7465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09770;product=tRNA-Tyr NZ_PYJV01000060.1 tRNAscan-SE exon 7429 7513 . + . ID=exon-C9E93_RS09770-1;Parent=rna-C9E93_RS09770;anticodon=(pos:7463..7465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS09770;product=tRNA-Tyr NZ_PYJV01000060.1 RefSeq gene 7557 7687 . + . ID=gene-C9E93_RS09775;Name=C9E93_RS09775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS09775;old_locus_tag=C9E93_10025 NZ_PYJV01000060.1 cmsearch ncRNA 7557 7687 . + . ID=rna-C9E93_RS09775;Parent=gene-C9E93_RS09775;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09775;product=RtT sRNA NZ_PYJV01000060.1 cmsearch exon 7557 7687 . + . ID=exon-C9E93_RS09775-1;Parent=rna-C9E93_RS09775;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS09775;product=RtT sRNA NZ_PYJV01000060.1 RefSeq gene 7790 9319 . - . ID=gene-C9E93_RS09780;Name=C9E93_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS09780;old_locus_tag=C9E93_10030 NZ_PYJV01000060.1 Protein Homology CDS 7790 9319 . - 0 ID=cds-WP_135370665.1;Parent=gene-C9E93_RS09780;Dbxref=GenBank:WP_135370665.1;Name=WP_135370665.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9E93_RS09780;product=tetratricopeptide repeat protein;protein_id=WP_135370665.1;transl_table=11 ##sequence-region NZ_PYJV01000106.1 1 8146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000106.1 RefSeq region 1 8146 . + . ID=NZ_PYJV01000106.1:1..8146;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000106.1 RefSeq gene 1 3146 . + . ID=gene-C9E93_RS18605;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=C9E93_RS18605;old_locus_tag=C9E93_19100;partial=true;start_range=.,1 NZ_PYJV01000106.1 Protein Homology CDS 1 3146 . + 2 ID=cds-WP_135400634.1;Parent=gene-C9E93_RS18605;Dbxref=GenBank:WP_135400634.1;Name=WP_135400634.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9E93_RS18605;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_135400634.1;start_range=.,1;transl_table=11 NZ_PYJV01000106.1 RefSeq gene 3308 4657 . - . ID=gene-C9E93_RS18610;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9E93_RS18610;old_locus_tag=C9E93_19105 NZ_PYJV01000106.1 Protein Homology CDS 3308 4657 . - 0 ID=cds-WP_000953167.1;Parent=gene-C9E93_RS18610;Dbxref=GenBank:WP_000953167.1;Name=WP_000953167.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9E93_RS18610;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953167.1;transl_table=11 NZ_PYJV01000106.1 RefSeq gene 4818 6284 . + . ID=gene-C9E93_RS18615;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9E93_RS18615;old_locus_tag=C9E93_19110 NZ_PYJV01000106.1 Protein Homology CDS 4818 6284 . + 0 ID=cds-WP_000944174.1;Parent=gene-C9E93_RS18615;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9E93_RS18615;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_PYJV01000106.1 RefSeq gene 6354 7931 . + . ID=gene-C9E93_RS18620;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9E93_RS18620;old_locus_tag=C9E93_19115 NZ_PYJV01000106.1 Protein Homology CDS 6354 7931 . + 0 ID=cds-WP_000138293.1;Parent=gene-C9E93_RS18620;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9E93_RS18620;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 ##sequence-region NZ_PYJV01000103.1 1 7820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000103.1 RefSeq region 1 7820 . + . ID=NZ_PYJV01000103.1:1..7820;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000103.1 RefSeq gene 396 1622 . + . ID=gene-C9E93_RS18430;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9E93_RS18430;old_locus_tag=C9E93_18915 NZ_PYJV01000103.1 Protein Homology CDS 396 1622 . + 0 ID=cds-WP_135370190.1;Parent=gene-C9E93_RS18430;Dbxref=GenBank:WP_135370190.1;Name=WP_135370190.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9E93_RS18430;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_135370190.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 1743 2087 . - . ID=gene-C9E93_RS18435;Name=C9E93_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18435;old_locus_tag=C9E93_18920 NZ_PYJV01000103.1 Protein Homology CDS 1743 2087 . - 0 ID=cds-WP_080222697.1;Parent=gene-C9E93_RS18435;Dbxref=GenBank:WP_080222697.1;Name=WP_080222697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9E93_RS18435;product=DUF1294 domain-containing protein;protein_id=WP_080222697.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 2994 3755 . + . ID=gene-C9E93_RS18440;Name=C9E93_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18440;old_locus_tag=C9E93_18925 NZ_PYJV01000103.1 Protein Homology CDS 2994 3755 . + 0 ID=cds-WP_000949383.1;Parent=gene-C9E93_RS18440;Dbxref=GenBank:WP_000949383.1;Name=WP_000949383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9E93_RS18440;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949383.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 3762 4409 . + . ID=gene-C9E93_RS18445;Name=C9E93_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18445;old_locus_tag=C9E93_18930 NZ_PYJV01000103.1 Protein Homology CDS 3762 4409 . + 0 ID=cds-WP_023242332.1;Parent=gene-C9E93_RS18445;Dbxref=GenBank:WP_023242332.1;Name=WP_023242332.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9E93_RS18445;product=amino acid ABC transporter permease;protein_id=WP_023242332.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 4434 5165 . + . ID=gene-C9E93_RS18450;Name=C9E93_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18450;old_locus_tag=C9E93_18935 NZ_PYJV01000103.1 Protein Homology CDS 4434 5165 . + 0 ID=cds-WP_135370189.1;Parent=gene-C9E93_RS18450;Dbxref=GenBank:WP_135370189.1;Name=WP_135370189.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9E93_RS18450;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_135370189.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 5162 5842 . + . ID=gene-C9E93_RS18455;Name=C9E93_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18455;old_locus_tag=C9E93_18940 NZ_PYJV01000103.1 Protein Homology CDS 5162 5842 . + 0 ID=cds-WP_000560165.1;Parent=gene-C9E93_RS18455;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9E93_RS18455;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11 NZ_PYJV01000103.1 RefSeq gene 5979 7529 . + . ID=gene-C9E93_RS18460;Name=C9E93_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18460;old_locus_tag=C9E93_18945 NZ_PYJV01000103.1 Protein Homology CDS 5979 7529 . + 0 ID=cds-WP_063809265.1;Parent=gene-C9E93_RS18460;Dbxref=GenBank:WP_063809265.1;Name=WP_063809265.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9E93_RS18460;product=glycosyltransferase family 39 protein;protein_id=WP_063809265.1;transl_table=11 ##sequence-region NZ_PYJV01000118.1 1 7054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000118.1 RefSeq region 1 7054 . + . ID=NZ_PYJV01000118.1:1..7054;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000118.1 RefSeq gene 218 688 . - . ID=gene-C9E93_RS21665;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9E93_RS21665;old_locus_tag=C9E93_22240 NZ_PYJV01000118.1 Protein Homology CDS 218 688 . - 0 ID=cds-WP_001257852.1;Parent=gene-C9E93_RS21665;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9E93_RS21665;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 1103 2041 . + . ID=gene-C9E93_RS21670;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9E93_RS21670;old_locus_tag=C9E93_22245 NZ_PYJV01000118.1 Protein Homology CDS 1103 2041 . + 0 ID=cds-WP_000861586.1;Parent=gene-C9E93_RS21670;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9E93_RS21670;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 2161 2790 . + . ID=gene-C9E93_RS21675;Name=C9E93_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21675;old_locus_tag=C9E93_22250 NZ_PYJV01000118.1 Protein Homology CDS 2161 2790 . + 0 ID=cds-WP_079958870.1;Parent=gene-C9E93_RS21675;Dbxref=GenBank:WP_079958870.1;Name=WP_079958870.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9E93_RS21675;product=GntR family transcriptional regulator;protein_id=WP_079958870.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 2777 3442 . + . ID=gene-C9E93_RS21680;Name=C9E93_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21680;old_locus_tag=C9E93_22255 NZ_PYJV01000118.1 Protein Homology CDS 2777 3442 . + 0 ID=cds-WP_001171581.1;Parent=gene-C9E93_RS21680;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9E93_RS21680;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 3653 4921 . + . ID=gene-C9E93_RS21685;Name=C9E93_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21685;old_locus_tag=C9E93_22260 NZ_PYJV01000118.1 Protein Homology CDS 3653 4921 . + 0 ID=cds-WP_000433394.1;Parent=gene-C9E93_RS21685;Dbxref=GenBank:WP_000433394.1;Name=WP_000433394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9E93_RS21685;product=SLC13 family permease;protein_id=WP_000433394.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 4954 5853 . + . ID=gene-C9E93_RS21690;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9E93_RS21690;old_locus_tag=C9E93_22265 NZ_PYJV01000118.1 Protein Homology CDS 4954 5853 . + 0 ID=cds-WP_000045349.1;Parent=gene-C9E93_RS21690;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9E93_RS21690;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 5853 6470 . + . ID=gene-C9E93_RS21695;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9E93_RS21695;old_locus_tag=C9E93_22270 NZ_PYJV01000118.1 Protein Homology CDS 5853 6470 . + 0 ID=cds-WP_000162405.1;Parent=gene-C9E93_RS21695;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9E93_RS21695;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_PYJV01000118.1 RefSeq gene 6627 6875 . + . ID=gene-C9E93_RS21700;Name=C9E93_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS21700;old_locus_tag=C9E93_22275 NZ_PYJV01000118.1 Protein Homology CDS 6627 6875 . + 0 ID=cds-WP_001745612.1;Parent=gene-C9E93_RS21700;Dbxref=GenBank:WP_001745612.1;Name=WP_001745612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=C9E93_RS21700;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001745612.1;transl_table=11 NZ_PYJV01000118.1 RefSeq pseudogene 6891 7054 . + . ID=gene-C9E93_RS21705;Name=C9E93_RS21705;end_range=7054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS21705;old_locus_tag=C9E93_22280;partial=true;pseudo=true NZ_PYJV01000118.1 Protein Homology CDS 6891 7054 . + 0 ID=cds-C9E93_RS21705;Parent=gene-C9E93_RS21705;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E93_RS21705;partial=true;product=oxaloacetate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJV01000112.1 1 6883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000112.1 RefSeq region 1 6883 . + . ID=NZ_PYJV01000112.1:1..6883;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000112.1 RefSeq pseudogene 1 112 . + . ID=gene-C9E93_RS20645;Name=C9E93_RS20645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS20645;old_locus_tag=C9E93_21190;partial=true;pseudo=true;start_range=.,1 NZ_PYJV01000112.1 Protein Homology CDS 1 112 . + 1 ID=cds-C9E93_RS20645;Parent=gene-C9E93_RS20645;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9E93_RS20645;partial=true;product=hydroxyacylglutathione hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 184 1551 . + . ID=gene-C9E93_RS20650;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9E93_RS20650;old_locus_tag=C9E93_21195 NZ_PYJV01000112.1 Protein Homology CDS 184 1551 . + 0 ID=cds-WP_000644706.1;Parent=gene-C9E93_RS20650;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9E93_RS20650;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 1607 2377 . - . ID=gene-C9E93_RS20655;Name=C9E93_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20655;old_locus_tag=C9E93_21200 NZ_PYJV01000112.1 Protein Homology CDS 1607 2377 . - 0 ID=cds-WP_000207222.1;Parent=gene-C9E93_RS20655;Dbxref=GenBank:WP_000207222.1;Name=WP_000207222.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9E93_RS20655;product=class I SAM-dependent methyltransferase;protein_id=WP_000207222.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 2455 3255 . - . ID=gene-C9E93_RS20660;Name=C9E93_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20660;old_locus_tag=C9E93_21205 NZ_PYJV01000112.1 Protein Homology CDS 2455 3255 . - 0 ID=cds-WP_001230970.1;Parent=gene-C9E93_RS20660;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9E93_RS20660;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 3387 4562 . - . ID=gene-C9E93_RS20665;Name=C9E93_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS20665;old_locus_tag=C9E93_21210 NZ_PYJV01000112.1 Protein Homology CDS 3387 4562 . - 0 ID=cds-WP_023261587.1;Parent=gene-C9E93_RS20665;Dbxref=GenBank:WP_023261587.1;Name=WP_023261587.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9E93_RS20665;product=MFS transporter;protein_id=WP_023261587.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 4667 5581 . + . ID=gene-C9E93_RS20670;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=C9E93_RS20670;old_locus_tag=C9E93_21215 NZ_PYJV01000112.1 Protein Homology CDS 4667 5581 . + 0 ID=cds-WP_000648536.1;Parent=gene-C9E93_RS20670;Dbxref=GenBank:WP_000648536.1;Name=WP_000648536.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9E93_RS20670;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648536.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 5602 6405 . - . ID=gene-C9E93_RS20675;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9E93_RS20675;old_locus_tag=C9E93_21220 NZ_PYJV01000112.1 Protein Homology CDS 5602 6405 . - 0 ID=cds-WP_135370512.1;Parent=gene-C9E93_RS20675;Dbxref=GenBank:WP_135370512.1;Name=WP_135370512.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9E93_RS20675;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_135370512.1;transl_table=11 NZ_PYJV01000112.1 RefSeq gene 6570 6646 . - . ID=gene-C9E93_RS20680;Name=C9E93_RS20680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS20680;old_locus_tag=C9E93_21225 NZ_PYJV01000112.1 tRNAscan-SE tRNA 6570 6646 . - . ID=rna-C9E93_RS20680;Parent=gene-C9E93_RS20680;anticodon=(pos:complement(6610..6612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20680;product=tRNA-Asp NZ_PYJV01000112.1 tRNAscan-SE exon 6570 6646 . - . ID=exon-C9E93_RS20680-1;Parent=rna-C9E93_RS20680;anticodon=(pos:complement(6610..6612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS20680;product=tRNA-Asp ##sequence-region NZ_PYJV01000015.1 1 102871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000015.1 RefSeq region 1 102871 . + . ID=NZ_PYJV01000015.1:1..102871;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000015.1 RefSeq gene 1 1114 . + . ID=gene-C9E93_RS00835;Name=C9E93_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00835;old_locus_tag=C9E93_00895;partial=true;start_range=.,1 NZ_PYJV01000015.1 Protein Homology CDS 1 1114 . + 1 ID=cds-WP_255121240.1;Parent=gene-C9E93_RS00835;Dbxref=GenBank:WP_255121240.1;Name=WP_255121240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025072.6;locus_tag=C9E93_RS00835;partial=true;product=glycosyltransferase;protein_id=WP_255121240.1;start_range=.,1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 1118 2065 . + . ID=gene-C9E93_RS00840;Name=C9E93_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00840;old_locus_tag=C9E93_00900 NZ_PYJV01000015.1 Protein Homology CDS 1118 2065 . + 0 ID=cds-WP_135400576.1;Parent=gene-C9E93_RS00840;Dbxref=GenBank:WP_135400576.1;Name=WP_135400576.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138993.1;locus_tag=C9E93_RS00840;product=glycosyltransferase family 2 protein;protein_id=WP_135400576.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 2066 3505 . + . ID=gene-C9E93_RS00845;Name=C9E93_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00845;old_locus_tag=C9E93_00905 NZ_PYJV01000015.1 Protein Homology CDS 2066 3505 . + 0 ID=cds-WP_135370350.1;Parent=gene-C9E93_RS00845;Dbxref=GenBank:WP_135370350.1;Name=WP_135370350.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=C9E93_RS00845;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_135370350.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 3492 4925 . + . ID=gene-C9E93_RS00850;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=C9E93_RS00850;old_locus_tag=C9E93_00910 NZ_PYJV01000015.1 Protein Homology CDS 3492 4925 . + 0 ID=cds-WP_135370351.1;Parent=gene-C9E93_RS00850;Dbxref=GenBank:WP_135370351.1;Name=WP_135370351.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103634.1;locus_tag=C9E93_RS00850;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_135370351.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 4997 6427 . + . ID=gene-C9E93_RS00855;Name=C9E93_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00855;old_locus_tag=C9E93_00915 NZ_PYJV01000015.1 Protein Homology CDS 4997 6427 . + 0 ID=cds-WP_000368701.1;Parent=gene-C9E93_RS00855;Dbxref=GenBank:WP_000368701.1;Name=WP_000368701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=C9E93_RS00855;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368701.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 6591 7997 . + . ID=gene-C9E93_RS00860;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9E93_RS00860;old_locus_tag=C9E93_00920 NZ_PYJV01000015.1 Protein Homology CDS 6591 7997 . + 0 ID=cds-WP_000043532.1;Parent=gene-C9E93_RS00860;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9E93_RS00860;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 8234 9400 . + . ID=gene-C9E93_RS00870;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9E93_RS00870;old_locus_tag=C9E93_00930 NZ_PYJV01000015.1 Protein Homology CDS 8234 9400 . + 0 ID=cds-WP_000704825.1;Parent=gene-C9E93_RS00870;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9E93_RS00870;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 9543 10526 . + . ID=gene-C9E93_RS00875;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9E93_RS00875;old_locus_tag=C9E93_00935 NZ_PYJV01000015.1 Protein Homology CDS 9543 10526 . + 0 ID=cds-WP_000215255.1;Parent=gene-C9E93_RS00875;Dbxref=GenBank:WP_000215255.1;Name=WP_000215255.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9E93_RS00875;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215255.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 10607 11218 . - . ID=gene-C9E93_RS00880;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9E93_RS00880;old_locus_tag=C9E93_00940 NZ_PYJV01000015.1 Protein Homology CDS 10607 11218 . - 0 ID=cds-WP_000954848.1;Parent=gene-C9E93_RS00880;Dbxref=GenBank:WP_000954848.1;Name=WP_000954848.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9E93_RS00880;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954848.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 11212 11988 . - . ID=gene-C9E93_RS00885;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9E93_RS00885;old_locus_tag=C9E93_00945 NZ_PYJV01000015.1 Protein Homology CDS 11212 11988 . - 0 ID=cds-WP_000880125.1;Parent=gene-C9E93_RS00885;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9E93_RS00885;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 11970 12707 . - . ID=gene-C9E93_RS00890;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9E93_RS00890;old_locus_tag=C9E93_00950 NZ_PYJV01000015.1 Protein Homology CDS 11970 12707 . - 0 ID=cds-WP_000586406.1;Parent=gene-C9E93_RS00890;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9E93_RS00890;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 12707 13297 . - . ID=gene-C9E93_RS00895;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9E93_RS00895;old_locus_tag=C9E93_00955 NZ_PYJV01000015.1 Protein Homology CDS 12707 13297 . - 0 ID=cds-WP_135370048.1;Parent=gene-C9E93_RS00895;Dbxref=GenBank:WP_135370048.1;Name=WP_135370048.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9E93_RS00895;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_135370048.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 13297 14364 . - . ID=gene-C9E93_RS00900;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9E93_RS00900;old_locus_tag=C9E93_00960 NZ_PYJV01000015.1 Protein Homology CDS 13297 14364 . - 0 ID=cds-WP_000080044.1;Parent=gene-C9E93_RS00900;Dbxref=GenBank:WP_000080044.1;Name=WP_000080044.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9E93_RS00900;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080044.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 14361 15440 . - . ID=gene-C9E93_RS00905;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9E93_RS00905;old_locus_tag=C9E93_00965 NZ_PYJV01000015.1 Protein Homology CDS 14361 15440 . - 0 ID=cds-WP_000102715.1;Parent=gene-C9E93_RS00905;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9E93_RS00905;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 15437 16741 . - . ID=gene-C9E93_RS00910;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9E93_RS00910;old_locus_tag=C9E93_00970 NZ_PYJV01000015.1 Protein Homology CDS 15437 16741 . - 0 ID=cds-WP_000009622.1;Parent=gene-C9E93_RS00910;Dbxref=GenBank:WP_000009622.1;Name=WP_000009622.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9E93_RS00910;product=histidinol dehydrogenase;protein_id=WP_000009622.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 16844 17743 . - . ID=gene-C9E93_RS00915;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9E93_RS00915;old_locus_tag=C9E93_00975 NZ_PYJV01000015.1 Protein Homology CDS 16844 17743 . - 0 ID=cds-WP_000886604.1;Parent=gene-C9E93_RS00915;Dbxref=GenBank:WP_000886604.1;Name=WP_000886604.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9E93_RS00915;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11 NZ_PYJV01000015.1 cmsearch sequence_feature 17790 17913 . - . ID=id-NZ_PYJV01000015.1:17790..17913;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJV01000015.1 RefSeq gene 17889 17939 . - . ID=gene-C9E93_RS00920;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9E93_RS00920;old_locus_tag=C9E93_00980 NZ_PYJV01000015.1 Protein Homology CDS 17889 17939 . - 0 ID=cds-WP_001364200.1;Parent=gene-C9E93_RS00920;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9E93_RS00920;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 18102 18926 . + . ID=gene-C9E93_RS00925;Name=C9E93_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00925;old_locus_tag=C9E93_00985 NZ_PYJV01000015.1 Protein Homology CDS 18102 18926 . + 0 ID=cds-WP_000754712.1;Parent=gene-C9E93_RS00925;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9E93_RS00925;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 18972 19886 . + . ID=gene-C9E93_RS00930;Name=C9E93_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00930;old_locus_tag=C9E93_00990 NZ_PYJV01000015.1 Protein Homology CDS 18972 19886 . + 0 ID=cds-WP_000803316.1;Parent=gene-C9E93_RS00930;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9E93_RS00930;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 20120 20182 . + . ID=gene-C9E93_RS00935;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9E93_RS00935;old_locus_tag=C9E93_00995 NZ_PYJV01000015.1 Protein Homology CDS 20120 20182 . + 0 ID=cds-WP_096335044.1;Parent=gene-C9E93_RS00935;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9E93_RS00935;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 20172 21530 . + . ID=gene-C9E93_RS00940;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=C9E93_RS00940;old_locus_tag=C9E93_01000 NZ_PYJV01000015.1 Protein Homology CDS 20172 21530 . + 0 ID=cds-WP_001519005.1;Parent=gene-C9E93_RS00940;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9E93_RS00940;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 21666 23096 . - . ID=gene-C9E93_RS00945;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9E93_RS00945;old_locus_tag=C9E93_01005 NZ_PYJV01000015.1 Protein Homology CDS 21666 23096 . - 0 ID=cds-WP_000216702.1;Parent=gene-C9E93_RS00945;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9E93_RS00945;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 23256 23333 . + . ID=gene-C9E93_RS23805;Name=C9E93_RS23805;end_range=23333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23805;partial=true;pseudo=true NZ_PYJV01000015.1 Protein Homology CDS 23256 23333 . + 0 ID=cds-C9E93_RS23805;Parent=gene-C9E93_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9E93_RS23805;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 23463 25811 . - . ID=gene-C9E93_RS00950;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9E93_RS00950;old_locus_tag=C9E93_01010 NZ_PYJV01000015.1 Protein Homology CDS 23463 25811 . - 0 ID=cds-WP_135400577.1;Parent=gene-C9E93_RS00950;Dbxref=GenBank:WP_135400577.1;Name=WP_135400577.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9E93_RS00950;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_135400577.1;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 26078 26170 . + . ID=gene-C9E93_RS00955;Name=C9E93_RS00955;end_range=26170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS00955;old_locus_tag=C9E93_01020;partial=true;pseudo=true;start_range=.,26078 NZ_PYJV01000015.1 Protein Homology CDS 26078 26170 . + 0 ID=cds-C9E93_RS00955;Parent=gene-C9E93_RS00955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=26170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E93_RS00955;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,26078;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 26429 28705 . + . ID=gene-C9E93_RS00960;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9E93_RS00960;old_locus_tag=C9E93_01025 NZ_PYJV01000015.1 Protein Homology CDS 26429 28705 . + 0 ID=cds-WP_001523462.1;Parent=gene-C9E93_RS00960;Dbxref=GenBank:WP_001523462.1;Name=WP_001523462.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9E93_RS00960;product=thiosulfate reductase PhsA;protein_id=WP_001523462.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 28720 29298 . + . ID=gene-C9E93_RS00965;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9E93_RS00965;old_locus_tag=C9E93_01030 NZ_PYJV01000015.1 Protein Homology CDS 28720 29298 . + 0 ID=cds-WP_001016236.1;Parent=gene-C9E93_RS00965;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9E93_RS00965;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 29295 30059 . + . ID=gene-C9E93_RS00970;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=C9E93_RS00970;old_locus_tag=C9E93_01035 NZ_PYJV01000015.1 Protein Homology CDS 29295 30059 . + 0 ID=cds-WP_001092553.1;Parent=gene-C9E93_RS00970;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9E93_RS00970;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 30183 31355 . + . ID=gene-C9E93_RS00975;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9E93_RS00975;old_locus_tag=C9E93_01040 NZ_PYJV01000015.1 Protein Homology CDS 30183 31355 . + 0 ID=cds-WP_000925039.1;Parent=gene-C9E93_RS00975;Dbxref=GenBank:WP_000925039.1;Name=WP_000925039.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9E93_RS00975;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925039.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 31506 31973 . + . ID=gene-C9E93_RS00980;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9E93_RS00980;old_locus_tag=C9E93_01045 NZ_PYJV01000015.1 Protein Homology CDS 31506 31973 . + 0 ID=cds-WP_000384326.1;Parent=gene-C9E93_RS00980;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9E93_RS00980;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 32092 33150 . + . ID=gene-C9E93_RS00985;Name=C9E93_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00985;old_locus_tag=C9E93_01050 NZ_PYJV01000015.1 Protein Homology CDS 32092 33150 . + 0 ID=cds-WP_001200854.1;Parent=gene-C9E93_RS00985;Dbxref=GenBank:WP_001200854.1;Name=WP_001200854.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9E93_RS00985;product=FUSC family protein;protein_id=WP_001200854.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 33395 33730 . + . ID=gene-C9E93_RS00990;Name=C9E93_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS00990;old_locus_tag=C9E93_01055 NZ_PYJV01000015.1 Protein Homology CDS 33395 33730 . + 0 ID=cds-WP_000450405.1;Parent=gene-C9E93_RS00990;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9E93_RS00990;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 33764 34630 . - . ID=gene-C9E93_RS00995;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9E93_RS00995;old_locus_tag=C9E93_01060 NZ_PYJV01000015.1 Protein Homology CDS 33764 34630 . - 0 ID=cds-WP_135370423.1;Parent=gene-C9E93_RS00995;Dbxref=GenBank:WP_135370423.1;Name=WP_135370423.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9E93_RS00995;product=L-threonine kinase PduX;protein_id=WP_135370423.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 34724 35938 . - . ID=gene-C9E93_RS01000;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=C9E93_RS01000;old_locus_tag=C9E93_01065 NZ_PYJV01000015.1 Protein Homology CDS 34724 35938 . - 0 ID=cds-WP_023204607.1;Parent=gene-C9E93_RS01000;Dbxref=GenBank:WP_023204607.1;Name=WP_023204607.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9E93_RS01000;product=propanediol utilization propionate kinase PduW;protein_id=WP_023204607.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 35923 36375 . - . ID=gene-C9E93_RS01005;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9E93_RS01005;old_locus_tag=C9E93_01070 NZ_PYJV01000015.1 Protein Homology CDS 35923 36375 . - 0 ID=cds-WP_000826277.1;Parent=gene-C9E93_RS01005;Dbxref=GenBank:WP_000826277.1;Name=WP_000826277.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9E93_RS01005;product=propanediol utilization protein PduV;protein_id=WP_000826277.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 36380 36730 . - . ID=gene-C9E93_RS01010;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9E93_RS01010;old_locus_tag=C9E93_01075 NZ_PYJV01000015.1 Protein Homology CDS 36380 36730 . - 0 ID=cds-WP_000441103.1;Parent=gene-C9E93_RS01010;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9E93_RS01010;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 36730 37284 . - . ID=gene-C9E93_RS01015;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9E93_RS01015;old_locus_tag=C9E93_01080 NZ_PYJV01000015.1 Protein Homology CDS 36730 37284 . - 0 ID=cds-WP_000075772.1;Parent=gene-C9E93_RS01015;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9E93_RS01015;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 37287 38642 . - . ID=gene-C9E93_RS01020;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9E93_RS01020;old_locus_tag=C9E93_01085 NZ_PYJV01000015.1 Protein Homology CDS 37287 38642 . - 0 ID=cds-WP_135400578.1;Parent=gene-C9E93_RS01020;Dbxref=GenBank:WP_135400578.1;Name=WP_135400578.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9E93_RS01020;product=cobalamin reductase PduS;protein_id=WP_135400578.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 38639 39751 . - . ID=gene-C9E93_RS01025;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9E93_RS01025;old_locus_tag=C9E93_01090 NZ_PYJV01000015.1 Protein Homology CDS 38639 39751 . - 0 ID=cds-WP_135370421.1;Parent=gene-C9E93_RS01025;Dbxref=GenBank:WP_135370421.1;Name=WP_135370421.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9E93_RS01025;product=1-propanol dehydrogenase PduQ;protein_id=WP_135370421.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 39763 41157 . - . ID=gene-C9E93_RS01030;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9E93_RS01030;old_locus_tag=C9E93_01095 NZ_PYJV01000015.1 Protein Homology CDS 39763 41157 . - 0 ID=cds-WP_135370420.1;Parent=gene-C9E93_RS01030;Dbxref=GenBank:WP_135370420.1;Name=WP_135370420.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9E93_RS01030;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_135370420.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 41154 42164 . - . ID=gene-C9E93_RS01035;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=C9E93_RS01035;old_locus_tag=C9E93_01100 NZ_PYJV01000015.1 Protein Homology CDS 41154 42164 . - 0 ID=cds-WP_135370419.1;Parent=gene-C9E93_RS01035;Dbxref=GenBank:WP_135370419.1;Name=WP_135370419.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=C9E93_RS01035;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_135370419.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 42174 42449 . - . ID=gene-C9E93_RS01040;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9E93_RS01040;old_locus_tag=C9E93_01105 NZ_PYJV01000015.1 Protein Homology CDS 42174 42449 . - 0 ID=cds-WP_000549825.1;Parent=gene-C9E93_RS01040;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9E93_RS01040;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 42453 42944 . - . ID=gene-C9E93_RS01045;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9E93_RS01045;old_locus_tag=C9E93_01110 NZ_PYJV01000015.1 Protein Homology CDS 42453 42944 . - 0 ID=cds-WP_135370418.1;Parent=gene-C9E93_RS01045;Dbxref=GenBank:WP_135370418.1;Name=WP_135370418.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9E93_RS01045;product=propanediol utilization microcompartment protein PduM;protein_id=WP_135370418.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 42941 43573 . - . ID=gene-C9E93_RS01050;Name=C9E93_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01050;old_locus_tag=C9E93_01115 NZ_PYJV01000015.1 Protein Homology CDS 42941 43573 . - 0 ID=cds-WP_135370417.1;Parent=gene-C9E93_RS01050;Dbxref=GenBank:WP_135370417.1;Name=WP_135370417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9E93_RS01050;product=phosphate propanoyltransferase;protein_id=WP_135370417.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 43573 44055 . - . ID=gene-C9E93_RS01055;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9E93_RS01055;old_locus_tag=C9E93_01120 NZ_PYJV01000015.1 Protein Homology CDS 43573 44055 . - 0 ID=cds-WP_077943427.1;Parent=gene-C9E93_RS01055;Dbxref=GenBank:WP_077943427.1;Name=WP_077943427.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9E93_RS01055;product=propanediol utilization microcompartment protein PduK;protein_id=WP_077943427.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 44059 44334 . - . ID=gene-C9E93_RS01060;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9E93_RS01060;old_locus_tag=C9E93_01125 NZ_PYJV01000015.1 Protein Homology CDS 44059 44334 . - 0 ID=cds-WP_001057755.1;Parent=gene-C9E93_RS01060;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9E93_RS01060;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 44353 44703 . - . ID=gene-C9E93_RS01065;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9E93_RS01065;old_locus_tag=C9E93_01130 NZ_PYJV01000015.1 Protein Homology CDS 44353 44703 . - 0 ID=cds-WP_000377970.1;Parent=gene-C9E93_RS01065;Dbxref=GenBank:WP_000377970.1;Name=WP_000377970.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377968.1;locus_tag=C9E93_RS01065;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377970.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 44693 46525 . - . ID=gene-C9E93_RS01070;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=C9E93_RS01070;old_locus_tag=C9E93_01135 NZ_PYJV01000015.1 Protein Homology CDS 44693 46525 . - 0 ID=cds-WP_001268899.1;Parent=gene-C9E93_RS01070;Dbxref=GenBank:WP_001268899.1;Name=WP_001268899.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9E93_RS01070;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_001268899.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 46541 47062 . - . ID=gene-C9E93_RS01075;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9E93_RS01075;old_locus_tag=C9E93_01140 NZ_PYJV01000015.1 Protein Homology CDS 46541 47062 . - 0 ID=cds-WP_001090597.1;Parent=gene-C9E93_RS01075;Dbxref=GenBank:WP_001090597.1;Name=WP_001090597.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9E93_RS01075;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090597.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 47077 47751 . - . ID=gene-C9E93_RS01080;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9E93_RS01080;old_locus_tag=C9E93_01145 NZ_PYJV01000015.1 Protein Homology CDS 47077 47751 . - 0 ID=cds-WP_000405048.1;Parent=gene-C9E93_RS01080;Dbxref=GenBank:WP_000405048.1;Name=WP_000405048.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9E93_RS01080;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405048.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 47762 49426 . - . ID=gene-C9E93_RS01085;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9E93_RS01085;old_locus_tag=C9E93_01150 NZ_PYJV01000015.1 Protein Homology CDS 47762 49426 . - 0 ID=cds-WP_001256899.1;Parent=gene-C9E93_RS01085;Dbxref=GenBank:WP_001256899.1;Name=WP_001256899.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9E93_RS01085;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256899.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 49445 50257 . - . ID=gene-C9E93_RS01090;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9E93_RS01090;old_locus_tag=C9E93_01155 NZ_PYJV01000015.1 Protein Homology CDS 49445 50257 . - 0 ID=cds-WP_000097497.1;Parent=gene-C9E93_RS01090;Dbxref=GenBank:WP_000097497.1;Name=WP_000097497.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9E93_RS01090;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097497.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 50254 50538 . - . ID=gene-C9E93_RS01095;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9E93_RS01095;old_locus_tag=C9E93_01160 NZ_PYJV01000015.1 Protein Homology CDS 50254 50538 . - 0 ID=cds-WP_001183618.1;Parent=gene-C9E93_RS01095;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=C9E93_RS01095;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 51063 51857 . + . ID=gene-C9E93_RS01100;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9E93_RS01100;old_locus_tag=C9E93_01165 NZ_PYJV01000015.1 Protein Homology CDS 51063 51857 . + 0 ID=cds-WP_001000023.1;Parent=gene-C9E93_RS01100;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9E93_RS01100;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 52074 52985 . + . ID=gene-C9E93_RS01105;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9E93_RS01105;old_locus_tag=C9E93_01170 NZ_PYJV01000015.1 Protein Homology CDS 52074 52985 . + 0 ID=cds-WP_135369938.1;Parent=gene-C9E93_RS01105;Dbxref=GenBank:WP_135369938.1;Name=WP_135369938.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9E93_RS01105;product=transcriptional regulator PocR;protein_id=WP_135369938.1;transl_table=11 NZ_PYJV01000015.1 cmsearch riboswitch 53311 53485 . + . ID=id-NZ_PYJV01000015.1:53311..53485;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJV01000015.1 RefSeq gene 53583 54962 . + . ID=gene-C9E93_RS01110;Name=C9E93_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01110;old_locus_tag=C9E93_01175 NZ_PYJV01000015.1 Protein Homology CDS 53583 54962 . + 0 ID=cds-WP_001618366.1;Parent=gene-C9E93_RS01110;Dbxref=GenBank:WP_001618366.1;Name=WP_001618366.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9E93_RS01110;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_001618366.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 54959 55918 . + . ID=gene-C9E93_RS01115;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9E93_RS01115;old_locus_tag=C9E93_01180 NZ_PYJV01000015.1 Protein Homology CDS 54959 55918 . + 0 ID=cds-WP_000153647.1;Parent=gene-C9E93_RS01115;Dbxref=GenBank:WP_000153647.1;Name=WP_000153647.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9E93_RS01115;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153647.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 55929 56561 . + . ID=gene-C9E93_RS01120;Name=C9E93_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01120;old_locus_tag=C9E93_01185 NZ_PYJV01000015.1 Protein Homology CDS 55929 56561 . + 0 ID=cds-WP_000558995.1;Parent=gene-C9E93_RS01120;Dbxref=GenBank:WP_000558995.1;Name=WP_000558995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9E93_RS01120;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558995.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 56561 57700 . + . ID=gene-C9E93_RS01125;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9E93_RS01125;old_locus_tag=C9E93_01190 NZ_PYJV01000015.1 Protein Homology CDS 56561 57700 . + 0 ID=cds-WP_135400579.1;Parent=gene-C9E93_RS01125;Dbxref=GenBank:WP_135400579.1;Name=WP_135400579.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9E93_RS01125;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_135400579.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 57694 58299 . + . ID=gene-C9E93_RS01130;Name=C9E93_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01130;old_locus_tag=C9E93_01195 NZ_PYJV01000015.1 Protein Homology CDS 57694 58299 . + 0 ID=cds-WP_135369940.1;Parent=gene-C9E93_RS01130;Dbxref=GenBank:WP_135369940.1;Name=WP_135369940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9E93_RS01130;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_135369940.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 58289 58867 . + . ID=gene-C9E93_RS01135;Name=C9E93_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01135;old_locus_tag=C9E93_01200 NZ_PYJV01000015.1 Protein Homology CDS 58289 58867 . + 0 ID=cds-WP_000650985.1;Parent=gene-C9E93_RS01135;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9E93_RS01135;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 58851 59624 . + . ID=gene-C9E93_RS01140;Name=C9E93_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01140;old_locus_tag=C9E93_01205 NZ_PYJV01000015.1 Protein Homology CDS 58851 59624 . + 0 ID=cds-WP_000004870.1;Parent=gene-C9E93_RS01140;Dbxref=GenBank:WP_000004870.1;Name=WP_000004870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9E93_RS01140;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004870.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 59605 60660 . + . ID=gene-C9E93_RS01145;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9E93_RS01145;old_locus_tag=C9E93_01210 NZ_PYJV01000015.1 Protein Homology CDS 59605 60660 . + 0 ID=cds-WP_135369942.1;Parent=gene-C9E93_RS01145;Dbxref=GenBank:WP_135369942.1;Name=WP_135369942.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9E93_RS01145;product=cobalt-precorrin 5A hydrolase;protein_id=WP_135369942.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 60660 61385 . + . ID=gene-C9E93_RS01150;Name=C9E93_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01150;old_locus_tag=C9E93_01215 NZ_PYJV01000015.1 Protein Homology CDS 60660 61385 . + 0 ID=cds-WP_000953637.1;Parent=gene-C9E93_RS01150;Dbxref=GenBank:WP_000953637.1;Name=WP_000953637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9E93_RS01150;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953637.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 61382 62173 . + . ID=gene-C9E93_RS01155;Name=C9E93_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01155;old_locus_tag=C9E93_01220 NZ_PYJV01000015.1 Protein Homology CDS 61382 62173 . + 0 ID=cds-WP_001001975.1;Parent=gene-C9E93_RS01155;Dbxref=GenBank:WP_001001975.1;Name=WP_001001975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9E93_RS01155;product=cobalt-precorrin-6A reductase;protein_id=WP_001001975.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 62176 62970 . + . ID=gene-C9E93_RS01160;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=C9E93_RS01160;old_locus_tag=C9E93_01225 NZ_PYJV01000015.1 Protein Homology CDS 62176 62970 . + 0 ID=cds-WP_000709784.1;Parent=gene-C9E93_RS01160;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9E93_RS01160;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 62967 63680 . + . ID=gene-C9E93_RS01165;Name=C9E93_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01165;old_locus_tag=C9E93_01230 NZ_PYJV01000015.1 Protein Homology CDS 62967 63680 . + 0 ID=cds-WP_001013552.1;Parent=gene-C9E93_RS01165;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9E93_RS01165;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 63677 64414 . + . ID=gene-C9E93_RS01170;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9E93_RS01170;old_locus_tag=C9E93_01235 NZ_PYJV01000015.1 Protein Homology CDS 63677 64414 . + 0 ID=cds-WP_000764336.1;Parent=gene-C9E93_RS01170;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9E93_RS01170;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 64416 64697 . + . ID=gene-C9E93_RS01175;Name=C9E93_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01175;old_locus_tag=C9E93_01240 NZ_PYJV01000015.1 Protein Homology CDS 64416 64697 . + 0 ID=cds-WP_000753212.1;Parent=gene-C9E93_RS01175;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9E93_RS01175;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 64684 65361 . + . ID=gene-C9E93_RS01180;Name=C9E93_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01180;old_locus_tag=C9E93_01245 NZ_PYJV01000015.1 Protein Homology CDS 64684 65361 . + 0 ID=cds-WP_000147138.1;Parent=gene-C9E93_RS01180;Dbxref=GenBank:WP_000147138.1;Name=WP_000147138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9E93_RS01180;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147138.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 65370 66185 . + . ID=gene-C9E93_RS01185;Name=C9E93_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01185;old_locus_tag=C9E93_01250 NZ_PYJV01000015.1 Protein Homology CDS 65370 66185 . + 0 ID=cds-WP_052934636.1;Parent=gene-C9E93_RS01185;Dbxref=GenBank:WP_052934636.1;Name=WP_052934636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9E93_RS01185;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_052934636.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 66182 67702 . + . ID=gene-C9E93_RS01190;Name=C9E93_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01190;old_locus_tag=C9E93_01255 NZ_PYJV01000015.1 Protein Homology CDS 66182 67702 . + 0 ID=cds-WP_135369943.1;Parent=gene-C9E93_RS01190;Dbxref=GenBank:WP_135369943.1;Name=WP_135369943.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9E93_RS01190;product=cobyric acid synthase;protein_id=WP_135369943.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 67699 68244 . + . ID=gene-C9E93_RS01195;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9E93_RS01195;old_locus_tag=C9E93_01260 NZ_PYJV01000015.1 Protein Homology CDS 67699 68244 . + 0 ID=cds-WP_000973146.1;Parent=gene-C9E93_RS01195;Dbxref=GenBank:WP_000973146.1;Name=WP_000973146.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9E93_RS01195;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973146.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 68241 68984 . + . ID=gene-C9E93_RS01200;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9E93_RS01200;old_locus_tag=C9E93_01265 NZ_PYJV01000015.1 Protein Homology CDS 68241 68984 . + 0 ID=cds-WP_000039997.1;Parent=gene-C9E93_RS01200;Dbxref=GenBank:WP_000039997.1;Name=WP_000039997.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9E93_RS01200;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039997.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 69011 70081 . + . ID=gene-C9E93_RS01205;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9E93_RS01205;old_locus_tag=C9E93_01270 NZ_PYJV01000015.1 Protein Homology CDS 69011 70081 . + 0 ID=cds-WP_001649922.1;Parent=gene-C9E93_RS01205;Dbxref=GenBank:WP_001649922.1;Name=WP_001649922.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9E93_RS01205;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001649922.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 70159 71088 . + . ID=gene-C9E93_RS01210;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9E93_RS01210;old_locus_tag=C9E93_01275 NZ_PYJV01000015.1 Protein Homology CDS 70159 71088 . + 0 ID=cds-WP_135369944.1;Parent=gene-C9E93_RS01210;Dbxref=GenBank:WP_135369944.1;Name=WP_135369944.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9E93_RS01210;product=L%2CD-transpeptidase;protein_id=WP_135369944.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 71316 71391 . - . ID=gene-C9E93_RS01215;Name=C9E93_RS01215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS01215;old_locus_tag=C9E93_01280 NZ_PYJV01000015.1 tRNAscan-SE tRNA 71316 71391 . - . ID=rna-C9E93_RS01215;Parent=gene-C9E93_RS01215;anticodon=(pos:complement(71356..71358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS01215;product=tRNA-Asn NZ_PYJV01000015.1 tRNAscan-SE exon 71316 71391 . - . ID=exon-C9E93_RS01215-1;Parent=rna-C9E93_RS01215;anticodon=(pos:complement(71356..71358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS01215;product=tRNA-Asn NZ_PYJV01000015.1 RefSeq gene 71532 72989 . - . ID=gene-C9E93_RS01220;Name=C9E93_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01220;old_locus_tag=C9E93_01285 NZ_PYJV01000015.1 Protein Homology CDS 71532 72989 . - 0 ID=cds-WP_135369945.1;Parent=gene-C9E93_RS01220;Dbxref=GenBank:WP_135369945.1;Name=WP_135369945.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9E93_RS01220;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_135369945.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 73149 73224 . + . ID=gene-C9E93_RS01225;Name=C9E93_RS01225;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS01225;old_locus_tag=C9E93_01290 NZ_PYJV01000015.1 tRNAscan-SE tRNA 73149 73224 . + . ID=rna-C9E93_RS01225;Parent=gene-C9E93_RS01225;anticodon=(pos:73182..73184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS01225;product=tRNA-Asn NZ_PYJV01000015.1 tRNAscan-SE exon 73149 73224 . + . ID=exon-C9E93_RS01225-1;Parent=rna-C9E93_RS01225;anticodon=(pos:73182..73184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS01225;product=tRNA-Asn NZ_PYJV01000015.1 RefSeq gene 73388 73912 . + . ID=gene-C9E93_RS01230;Name=C9E93_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01230;old_locus_tag=C9E93_01295 NZ_PYJV01000015.1 Protein Homology CDS 73388 73912 . + 0 ID=cds-WP_001219023.1;Parent=gene-C9E93_RS01230;Dbxref=GenBank:WP_001219023.1;Name=WP_001219023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9E93_RS01230;product=peptidase;protein_id=WP_001219023.1;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 74387 75258 . + . ID=gene-C9E93_RS01240;Name=C9E93_RS01240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS01240;old_locus_tag=C9E93_01305;pseudo=true NZ_PYJV01000015.1 Protein Homology CDS 74387 75258 . + 0 ID=cds-C9E93_RS01240;Parent=gene-C9E93_RS01240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9E93_RS01240;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 75282 75521 . + . ID=gene-C9E93_RS01245;Name=C9E93_RS01245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS01245;old_locus_tag=C9E93_01310;partial=true;pseudo=true;start_range=.,75282 NZ_PYJV01000015.1 Protein Homology CDS 75282 75521 . + 0 ID=cds-C9E93_RS01245;Parent=gene-C9E93_RS01245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9E93_RS01245;partial=true;product=transposase;pseudo=true;start_range=.,75282;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 76244 77938 . + . ID=gene-C9E93_RS01250;Name=C9E93_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01250;old_locus_tag=C9E93_01315 NZ_PYJV01000015.1 Protein Homology CDS 76244 77938 . + 0 ID=cds-WP_080214938.1;Parent=gene-C9E93_RS01250;Dbxref=GenBank:WP_080214938.1;Name=WP_080214938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9E93_RS01250;product=SEL1-like repeat protein;protein_id=WP_080214938.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 77995 79725 . + . ID=gene-C9E93_RS01255;Name=C9E93_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01255;old_locus_tag=C9E93_01320 NZ_PYJV01000015.1 Protein Homology CDS 77995 79725 . + 0 ID=cds-WP_135370194.1;Parent=gene-C9E93_RS01255;Dbxref=GenBank:WP_135370194.1;Name=WP_135370194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9E93_RS01255;product=hypothetical protein;protein_id=WP_135370194.1;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 79783 79854 . - . ID=gene-C9E93_RS01260;Name=C9E93_RS01260;end_range=79854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS01260;old_locus_tag=C9E93_01325;partial=true;pseudo=true NZ_PYJV01000015.1 Protein Homology CDS 79783 79854 . - 0 ID=cds-C9E93_RS01260;Parent=gene-C9E93_RS01260;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=79854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E93_RS01260;partial=true;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 79823 80563 . + . ID=gene-C9E93_RS24125;Name=C9E93_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24125;old_locus_tag=C9E93_01330 NZ_PYJV01000015.1 Protein Homology CDS 79823 80563 . + 0 ID=cds-WP_440591217.1;Parent=gene-C9E93_RS24125;Dbxref=GenBank:WP_440591217.1;Name=WP_440591217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012755.6;locus_tag=C9E93_RS24125;product=RHS repeat-associated core domain-containing protein;protein_id=WP_440591217.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 80563 80895 . + . ID=gene-C9E93_RS01270;Name=C9E93_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01270;old_locus_tag=C9E93_01335 NZ_PYJV01000015.1 Protein Homology CDS 80563 80895 . + 0 ID=cds-WP_135370195.1;Parent=gene-C9E93_RS01270;Dbxref=GenBank:WP_135370195.1;Name=WP_135370195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750702.1;locus_tag=C9E93_RS01270;product=barstar family protein;protein_id=WP_135370195.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 80951 81280 . - . ID=gene-C9E93_RS01275;Name=C9E93_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01275;old_locus_tag=C9E93_01340 NZ_PYJV01000015.1 Protein Homology CDS 80951 81280 . - 0 ID=cds-WP_135370196.1;Parent=gene-C9E93_RS01275;Dbxref=GenBank:WP_135370196.1;Name=WP_135370196.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807561.1;locus_tag=C9E93_RS01275;product=SymE family type I addiction module toxin;protein_id=WP_135370196.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 81354 81752 . - . ID=gene-C9E93_RS01280;Name=C9E93_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01280;old_locus_tag=C9E93_01345 NZ_PYJV01000015.1 Protein Homology CDS 81354 81752 . - 0 ID=cds-WP_135370197.1;Parent=gene-C9E93_RS01280;Dbxref=GenBank:WP_135370197.1;Name=WP_135370197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095750.1;locus_tag=C9E93_RS01280;product=helix-turn-helix domain-containing protein;protein_id=WP_135370197.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 81853 84834 . + . ID=gene-C9E93_RS01285;Name=C9E93_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01285;old_locus_tag=C9E93_01350 NZ_PYJV01000015.1 Protein Homology CDS 81853 84834 . + 0 ID=cds-WP_135370198.1;Parent=gene-C9E93_RS01285;Dbxref=GenBank:WP_135370198.1;Name=WP_135370198.1;Ontology_term=GO:0006260,GO:0003677,GO:0003899,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543377.1;locus_tag=C9E93_RS01285;product=CHC2 zinc finger domain-containing protein;protein_id=WP_135370198.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 85052 86173 . + . ID=gene-C9E93_RS01290;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E93_RS01290;old_locus_tag=C9E93_01355 NZ_PYJV01000015.1 Protein Homology CDS 85052 86173 . + 0 ID=cds-WP_135370199.1;Parent=gene-C9E93_RS01290;Dbxref=GenBank:WP_135370199.1;Name=WP_135370199.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003570254.1;locus_tag=C9E93_RS01290;product=site-specific tyrosine recombinase XerC;protein_id=WP_135370199.1;transl_table=11 NZ_PYJV01000015.1 RefSeq pseudogene 87333 87428 . + . ID=gene-C9E93_RS24130;Name=C9E93_RS24130;end_range=87428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS24130;partial=true;pseudo=true;start_range=.,87333 NZ_PYJV01000015.1 Protein Homology CDS 87333 87428 . + 0 ID=cds-C9E93_RS24130;Parent=gene-C9E93_RS24130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=87428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=C9E93_RS24130;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,87333;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 87483 87773 . + . ID=gene-C9E93_RS01295;Name=C9E93_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01295;old_locus_tag=C9E93_01360 NZ_PYJV01000015.1 Protein Homology CDS 87483 87773 . + 0 ID=cds-WP_255121225.1;Parent=gene-C9E93_RS01295;Dbxref=GenBank:WP_255121225.1;Name=WP_255121225.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: protein motif:HMM:NF012755.6;locus_tag=C9E93_RS01295;product=ribonuclease domain-containing protein;protein_id=WP_255121225.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 87773 88105 . + . ID=gene-C9E93_RS01300;Name=C9E93_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01300;old_locus_tag=C9E93_01365 NZ_PYJV01000015.1 Protein Homology CDS 87773 88105 . + 0 ID=cds-WP_135370195.1-2;Parent=gene-C9E93_RS01300;Dbxref=GenBank:WP_135370195.1;Name=WP_135370195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750702.1;locus_tag=C9E93_RS01300;product=barstar family protein;protein_id=WP_135370195.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 88161 88490 . - . ID=gene-C9E93_RS01305;Name=C9E93_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01305;old_locus_tag=C9E93_01370 NZ_PYJV01000015.1 Protein Homology CDS 88161 88490 . - 0 ID=cds-WP_135370196.1-2;Parent=gene-C9E93_RS01305;Dbxref=GenBank:WP_135370196.1;Name=WP_135370196.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807561.1;locus_tag=C9E93_RS01305;product=SymE family type I addiction module toxin;protein_id=WP_135370196.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 88564 88962 . - . ID=gene-C9E93_RS01310;Name=C9E93_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01310;old_locus_tag=C9E93_01375 NZ_PYJV01000015.1 Protein Homology CDS 88564 88962 . - 0 ID=cds-WP_135370197.1-2;Parent=gene-C9E93_RS01310;Dbxref=GenBank:WP_135370197.1;Name=WP_135370197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095750.1;locus_tag=C9E93_RS01310;product=helix-turn-helix domain-containing protein;protein_id=WP_135370197.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 89063 92044 . + . ID=gene-C9E93_RS01315;Name=C9E93_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01315;old_locus_tag=C9E93_01380 NZ_PYJV01000015.1 Protein Homology CDS 89063 92044 . + 0 ID=cds-WP_135370198.1-2;Parent=gene-C9E93_RS01315;Dbxref=GenBank:WP_135370198.1;Name=WP_135370198.1;Ontology_term=GO:0006260,GO:0003677,GO:0003899,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543377.1;locus_tag=C9E93_RS01315;product=CHC2 zinc finger domain-containing protein;protein_id=WP_135370198.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 92262 93383 . + . ID=gene-C9E93_RS01320;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E93_RS01320;old_locus_tag=C9E93_01385 NZ_PYJV01000015.1 Protein Homology CDS 92262 93383 . + 0 ID=cds-WP_135370199.1-2;Parent=gene-C9E93_RS01320;Dbxref=GenBank:WP_135370199.1;Name=WP_135370199.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003570254.1;locus_tag=C9E93_RS01320;product=site-specific tyrosine recombinase XerC;protein_id=WP_135370199.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 95544 95732 . + . ID=gene-C9E93_RS01325;Name=C9E93_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01325;old_locus_tag=C9E93_01390 NZ_PYJV01000015.1 Protein Homology CDS 95544 95732 . + 0 ID=cds-WP_039591096.1;Parent=gene-C9E93_RS01325;Dbxref=GenBank:WP_039591096.1;Name=WP_039591096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538698.1;locus_tag=C9E93_RS01325;product=hypothetical protein;protein_id=WP_039591096.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 95750 97204 . + . ID=gene-C9E93_RS01330;Name=C9E93_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01330;old_locus_tag=C9E93_01395 NZ_PYJV01000015.1 Protein Homology CDS 95750 97204 . + 0 ID=cds-WP_000428191.1;Parent=gene-C9E93_RS01330;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9E93_RS01330;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 98110 98670 . - . ID=gene-C9E93_RS01340;Name=C9E93_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01340;old_locus_tag=C9E93_01405 NZ_PYJV01000015.1 Protein Homology CDS 98110 98670 . - 0 ID=cds-WP_437436344.1;Parent=gene-C9E93_RS01340;Dbxref=GenBank:WP_437436344.1;Name=WP_437436344.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751883.1;locus_tag=C9E93_RS01340;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_437436344.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 98782 99123 . + . ID=gene-C9E93_RS01345;Name=C9E93_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01345;old_locus_tag=C9E93_01410 NZ_PYJV01000015.1 Protein Homology CDS 98782 99123 . + 0 ID=cds-WP_023226656.1;Parent=gene-C9E93_RS01345;Dbxref=GenBank:WP_023226656.1;Name=WP_023226656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967787.1;locus_tag=C9E93_RS01345;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023226656.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 99441 99722 . - . ID=gene-C9E93_RS24045;Name=C9E93_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS24045 NZ_PYJV01000015.1 Protein Homology CDS 99441 99722 . - 0 ID=cds-WP_001219035.1;Parent=gene-C9E93_RS24045;Dbxref=GenBank:WP_001219035.1;Name=WP_001219035.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=C9E93_RS24045;product=Arm DNA-binding domain-containing protein;protein_id=WP_001219035.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 100264 101139 . + . ID=gene-C9E93_RS01360;Name=C9E93_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01360;old_locus_tag=C9E93_01430 NZ_PYJV01000015.1 Protein Homology CDS 100264 101139 . + 0 ID=cds-WP_135370449.1;Parent=gene-C9E93_RS01360;Dbxref=GenBank:WP_135370449.1;Name=WP_135370449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=C9E93_RS01360;product=DUF6387 family protein;protein_id=WP_135370449.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 101290 101508 . + . ID=gene-C9E93_RS01365;Name=C9E93_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01365;old_locus_tag=C9E93_01435 NZ_PYJV01000015.1 Protein Homology CDS 101290 101508 . + 0 ID=cds-WP_000240779.1;Parent=gene-C9E93_RS01365;Dbxref=GenBank:WP_000240779.1;Name=WP_000240779.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=C9E93_RS01365;product=helix-turn-helix transcriptional regulator;protein_id=WP_000240779.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 101590 101880 . + . ID=gene-C9E93_RS01370;Name=C9E93_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01370;old_locus_tag=C9E93_01440 NZ_PYJV01000015.1 Protein Homology CDS 101590 101880 . + 0 ID=cds-WP_000687681.1;Parent=gene-C9E93_RS01370;Dbxref=GenBank:WP_000687681.1;Name=WP_000687681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=C9E93_RS01370;product=hypothetical protein;protein_id=WP_000687681.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 101925 102221 . + . ID=gene-C9E93_RS01375;Name=C9E93_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01375;old_locus_tag=C9E93_01445 NZ_PYJV01000015.1 Protein Homology CDS 101925 102221 . + 0 ID=cds-WP_135370063.1;Parent=gene-C9E93_RS01375;Dbxref=GenBank:WP_135370063.1;Name=WP_135370063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=C9E93_RS01375;product=hypothetical protein;protein_id=WP_135370063.1;transl_table=11 NZ_PYJV01000015.1 RefSeq gene 102270 102752 . - . ID=gene-C9E93_RS01380;Name=C9E93_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS01380;old_locus_tag=C9E93_01450 NZ_PYJV01000015.1 Protein Homology CDS 102270 102752 . - 0 ID=cds-WP_135370064.1;Parent=gene-C9E93_RS01380;Dbxref=GenBank:WP_135370064.1;Name=WP_135370064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747607.1;locus_tag=C9E93_RS01380;product=DUF4756 family protein;protein_id=WP_135370064.1;transl_table=11 ##sequence-region NZ_PYJV01000094.1 1 6542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000094.1 RefSeq region 1 6542 . + . ID=NZ_PYJV01000094.1:1..6542;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000094.1 RefSeq gene 292 783 . + . ID=gene-C9E93_RS16885;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9E93_RS16885;old_locus_tag=C9E93_17320 NZ_PYJV01000094.1 Protein Homology CDS 292 783 . + 0 ID=cds-WP_000228069.1;Parent=gene-C9E93_RS16885;Dbxref=GenBank:WP_000228069.1;Name=WP_000228069.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9E93_RS16885;product=ferredoxin-type protein NapF;protein_id=WP_000228069.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 773 1036 . + . ID=gene-C9E93_RS16890;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9E93_RS16890;old_locus_tag=C9E93_17325 NZ_PYJV01000094.1 Protein Homology CDS 773 1036 . + 0 ID=cds-WP_001260058.1;Parent=gene-C9E93_RS16890;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9E93_RS16890;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 1033 3519 . + . ID=gene-C9E93_RS16895;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9E93_RS16895;old_locus_tag=C9E93_17330 NZ_PYJV01000094.1 Protein Homology CDS 1033 3519 . + 0 ID=cds-WP_000778097.1;Parent=gene-C9E93_RS16895;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9E93_RS16895;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 3526 4221 . + . ID=gene-C9E93_RS16900;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9E93_RS16900;old_locus_tag=C9E93_17335 NZ_PYJV01000094.1 Protein Homology CDS 3526 4221 . + 0 ID=cds-WP_000091682.1;Parent=gene-C9E93_RS16900;Dbxref=GenBank:WP_000091682.1;Name=WP_000091682.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9E93_RS16900;product=ferredoxin-type protein NapG;protein_id=WP_000091682.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 4208 5077 . + . ID=gene-C9E93_RS16905;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9E93_RS16905;old_locus_tag=C9E93_17340 NZ_PYJV01000094.1 Protein Homology CDS 4208 5077 . + 0 ID=cds-WP_000013529.1;Parent=gene-C9E93_RS16905;Dbxref=GenBank:WP_000013529.1;Name=WP_000013529.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9E93_RS16905;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013529.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 5193 5642 . + . ID=gene-C9E93_RS16910;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9E93_RS16910;old_locus_tag=C9E93_17350 NZ_PYJV01000094.1 Protein Homology CDS 5193 5642 . + 0 ID=cds-WP_000835182.1;Parent=gene-C9E93_RS16910;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9E93_RS16910;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 5652 6254 . + . ID=gene-C9E93_RS16915;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9E93_RS16915;old_locus_tag=C9E93_17355 NZ_PYJV01000094.1 Protein Homology CDS 5652 6254 . + 0 ID=cds-WP_000431778.1;Parent=gene-C9E93_RS16915;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9E93_RS16915;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_PYJV01000094.1 RefSeq gene 6275 6542 . + . ID=gene-C9E93_RS16920;Name=C9E93_RS16920;end_range=6542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS16920;old_locus_tag=C9E93_17360;partial=true NZ_PYJV01000094.1 Protein Homology CDS 6275 6542 . + 0 ID=cds-WP_135370410.1;Parent=gene-C9E93_RS16920;Dbxref=GenBank:WP_135370410.1;Name=WP_135370410.1;Ontology_term=GO:0005524;end_range=6542,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9E93_RS16920;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_135370410.1;transl_table=11 ##sequence-region NZ_PYJV01000102.1 1 4986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000102.1 RefSeq region 1 4986 . + . ID=NZ_PYJV01000102.1:1..4986;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000102.1 RefSeq gene 22 1059 . - . ID=gene-C9E93_RS18400;Name=C9E93_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18400;old_locus_tag=C9E93_18885 NZ_PYJV01000102.1 Protein Homology CDS 22 1059 . - 0 ID=cds-WP_135400630.1;Parent=gene-C9E93_RS18400;Dbxref=GenBank:WP_135400630.1;Name=WP_135400630.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9E93_RS18400;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_135400630.1;transl_table=11 NZ_PYJV01000102.1 RefSeq gene 1056 1613 . - . ID=gene-C9E93_RS18405;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9E93_RS18405;old_locus_tag=C9E93_18890 NZ_PYJV01000102.1 Protein Homology CDS 1056 1613 . - 0 ID=cds-WP_000828284.1;Parent=gene-C9E93_RS18405;Dbxref=GenBank:WP_000828284.1;Name=WP_000828284.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9E93_RS18405;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828284.1;transl_table=11 NZ_PYJV01000102.1 RefSeq gene 1610 3541 . - . ID=gene-C9E93_RS18410;Name=C9E93_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18410;old_locus_tag=C9E93_18895 NZ_PYJV01000102.1 Protein Homology CDS 1610 3541 . - 0 ID=cds-WP_023215043.1;Parent=gene-C9E93_RS18410;Dbxref=GenBank:WP_023215043.1;Name=WP_023215043.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9E93_RS18410;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_023215043.1;transl_table=11 NZ_PYJV01000102.1 RefSeq gene 3538 4017 . - . ID=gene-C9E93_RS18415;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9E93_RS18415;old_locus_tag=C9E93_18900 NZ_PYJV01000102.1 Protein Homology CDS 3538 4017 . - 0 ID=cds-WP_135400631.1;Parent=gene-C9E93_RS18415;Dbxref=GenBank:WP_135400631.1;Name=WP_135400631.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9E93_RS18415;product=cytochrome c maturation protein CcmE;protein_id=WP_135400631.1;transl_table=11 NZ_PYJV01000102.1 RefSeq gene 4014 4226 . - . ID=gene-C9E93_RS18420;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9E93_RS18420;old_locus_tag=C9E93_18905 NZ_PYJV01000102.1 Protein Homology CDS 4014 4226 . - 0 ID=cds-WP_000074110.1;Parent=gene-C9E93_RS18420;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9E93_RS18420;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_PYJV01000102.1 RefSeq gene 4223 4960 . - . ID=gene-C9E93_RS18425;Name=C9E93_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18425;old_locus_tag=C9E93_18910 NZ_PYJV01000102.1 Protein Homology CDS 4223 4960 . - 0 ID=cds-WP_000266005.1;Parent=gene-C9E93_RS18425;Dbxref=GenBank:WP_000266005.1;Name=WP_000266005.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9E93_RS18425;product=heme ABC transporter permease;protein_id=WP_000266005.1;transl_table=11 ##sequence-region NZ_PYJV01000076.1 1 4355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000076.1 RefSeq region 1 4355 . + . ID=NZ_PYJV01000076.1:1..4355;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000076.1 RefSeq gene 211 1239 . + . ID=gene-C9E93_RS12985;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9E93_RS12985;old_locus_tag=C9E93_13305 NZ_PYJV01000076.1 Protein Homology CDS 211 1239 . + 0 ID=cds-WP_000149799.1;Parent=gene-C9E93_RS12985;Dbxref=GenBank:WP_000149799.1;Name=WP_000149799.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9E93_RS12985;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149799.1;transl_table=11 NZ_PYJV01000076.1 RefSeq gene 1236 2198 . + . ID=gene-C9E93_RS12990;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9E93_RS12990;old_locus_tag=C9E93_13310 NZ_PYJV01000076.1 Protein Homology CDS 1236 2198 . + 0 ID=cds-WP_000655746.1;Parent=gene-C9E93_RS12990;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9E93_RS12990;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_PYJV01000076.1 RefSeq gene 2233 3183 . - . ID=gene-C9E93_RS12995;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9E93_RS12995;old_locus_tag=C9E93_13315 NZ_PYJV01000076.1 Protein Homology CDS 2233 3183 . - 0 ID=cds-WP_000023069.1;Parent=gene-C9E93_RS12995;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9E93_RS12995;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_PYJV01000076.1 RefSeq gene 3392 3565 . - . ID=gene-C9E93_RS13000;Name=C9E93_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13000;old_locus_tag=C9E93_13325 NZ_PYJV01000076.1 Protein Homology CDS 3392 3565 . - 0 ID=cds-WP_001541267.1;Parent=gene-C9E93_RS13000;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9E93_RS13000;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_PYJV01000076.1 RefSeq gene 3585 3660 . + . ID=gene-C9E93_RS13005;Name=C9E93_RS13005;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13005;old_locus_tag=C9E93_13330 NZ_PYJV01000076.1 tRNAscan-SE tRNA 3585 3660 . + . ID=rna-C9E93_RS13005;Parent=gene-C9E93_RS13005;anticodon=(pos:3618..3620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13005;product=tRNA-Thr NZ_PYJV01000076.1 tRNAscan-SE exon 3585 3660 . + . ID=exon-C9E93_RS13005-1;Parent=rna-C9E93_RS13005;anticodon=(pos:3618..3620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13005;product=tRNA-Thr NZ_PYJV01000076.1 RefSeq gene 3669 3753 . + . ID=gene-C9E93_RS13010;Name=C9E93_RS13010;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13010;old_locus_tag=C9E93_13335 NZ_PYJV01000076.1 tRNAscan-SE tRNA 3669 3753 . + . ID=rna-C9E93_RS13010;Parent=gene-C9E93_RS13010;anticodon=(pos:3703..3705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13010;product=tRNA-Tyr NZ_PYJV01000076.1 tRNAscan-SE exon 3669 3753 . + . ID=exon-C9E93_RS13010-1;Parent=rna-C9E93_RS13010;anticodon=(pos:3703..3705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13010;product=tRNA-Tyr NZ_PYJV01000076.1 RefSeq gene 3870 3944 . + . ID=gene-C9E93_RS13015;Name=C9E93_RS13015;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13015;old_locus_tag=C9E93_13340 NZ_PYJV01000076.1 tRNAscan-SE tRNA 3870 3944 . + . ID=rna-C9E93_RS13015;Parent=gene-C9E93_RS13015;anticodon=(pos:3903..3905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13015;product=tRNA-Gly NZ_PYJV01000076.1 tRNAscan-SE exon 3870 3944 . + . ID=exon-C9E93_RS13015-1;Parent=rna-C9E93_RS13015;anticodon=(pos:3903..3905);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13015;product=tRNA-Gly NZ_PYJV01000076.1 RefSeq gene 3951 4026 . + . ID=gene-C9E93_RS13020;Name=C9E93_RS13020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS13020;old_locus_tag=C9E93_13345 NZ_PYJV01000076.1 tRNAscan-SE tRNA 3951 4026 . + . ID=rna-C9E93_RS13020;Parent=gene-C9E93_RS13020;anticodon=(pos:3984..3986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13020;product=tRNA-Thr NZ_PYJV01000076.1 tRNAscan-SE exon 3951 4026 . + . ID=exon-C9E93_RS13020-1;Parent=rna-C9E93_RS13020;anticodon=(pos:3984..3986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS13020;product=tRNA-Thr NZ_PYJV01000076.1 RefSeq gene 4142 4355 . + . ID=gene-C9E93_RS13025;Name=C9E93_RS13025;end_range=4355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS13025;old_locus_tag=C9E93_13350;partial=true NZ_PYJV01000076.1 Protein Homology CDS 4142 4355 . + 0 ID=cds-WP_000031662.1-2;Parent=gene-C9E93_RS13025;Dbxref=GenBank:WP_000031662.1;Name=WP_000031662.1;Ontology_term=GO:0003924,GO:0005525;end_range=4355,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E93_RS13025;partial=true;product=GTP-binding protein;protein_id=WP_000031662.1;transl_table=11 ##sequence-region NZ_PYJV01000045.1 1 3862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000045.1 RefSeq region 1 3862 . + . ID=NZ_PYJV01000045.1:1..3862;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000045.1 RefSeq gene 11 1330 . - . ID=gene-C9E93_RS06915;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9E93_RS06915;old_locus_tag=C9E93_07135 NZ_PYJV01000045.1 Protein Homology CDS 11 1330 . - 0 ID=cds-WP_001670706.1;Parent=gene-C9E93_RS06915;Dbxref=GenBank:WP_001670706.1;Name=WP_001670706.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9E93_RS06915;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001670706.1;transl_table=11 NZ_PYJV01000045.1 RefSeq gene 1320 2708 . - . ID=gene-C9E93_RS06920;Name=C9E93_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS06920;old_locus_tag=C9E93_07140 NZ_PYJV01000045.1 Protein Homology CDS 1320 2708 . - 0 ID=cds-WP_023181267.1;Parent=gene-C9E93_RS06920;Dbxref=GenBank:WP_023181267.1;Name=WP_023181267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9E93_RS06920;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_023181267.1;transl_table=11 NZ_PYJV01000045.1 RefSeq gene 2705 3337 . - . ID=gene-C9E93_RS06925;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9E93_RS06925;old_locus_tag=C9E93_07145 NZ_PYJV01000045.1 Protein Homology CDS 2705 3337 . - 0 ID=cds-WP_135400601.1;Parent=gene-C9E93_RS06925;Dbxref=GenBank:WP_135400601.1;Name=WP_135400601.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9E93_RS06925;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_135400601.1;transl_table=11 ##sequence-region NZ_PYJV01000107.1 1 3789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000107.1 RefSeq region 1 3789 . + . ID=NZ_PYJV01000107.1:1..3789;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000107.1 RefSeq gene 926 1195 . + . ID=gene-C9E93_RS18625;Name=C9E93_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18625;old_locus_tag=C9E93_19120 NZ_PYJV01000107.1 Protein Homology CDS 926 1195 . + 0 ID=cds-WP_135400635.1;Parent=gene-C9E93_RS18625;Dbxref=GenBank:WP_135400635.1;Name=WP_135400635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=C9E93_RS18625;product=hypothetical protein;protein_id=WP_135400635.1;transl_table=11 NZ_PYJV01000107.1 RefSeq gene 1429 2391 . + . ID=gene-C9E93_RS18630;Name=C9E93_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18630;old_locus_tag=C9E93_19125 NZ_PYJV01000107.1 Protein Homology CDS 1429 2391 . + 0 ID=cds-WP_135400636.1;Parent=gene-C9E93_RS18630;Dbxref=GenBank:WP_135400636.1;Name=WP_135400636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398601.1;locus_tag=C9E93_RS18630;product=hypothetical protein;protein_id=WP_135400636.1;transl_table=11 NZ_PYJV01000107.1 RefSeq gene 2452 3624 . + . ID=gene-C9E93_RS18635;Name=C9E93_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18635;old_locus_tag=C9E93_19130 NZ_PYJV01000107.1 Protein Homology CDS 2452 3624 . + 0 ID=cds-WP_135400637.1;Parent=gene-C9E93_RS18635;Dbxref=GenBank:WP_135400637.1;Name=WP_135400637.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120270.1;locus_tag=C9E93_RS18635;product=ComEA family DNA-binding protein;protein_id=WP_135400637.1;transl_table=11 ##sequence-region NZ_PYJV01000130.1 1 3130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000130.1 RefSeq region 1 3130 . + . ID=NZ_PYJV01000130.1:1..3130;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000130.1 RefSeq gene 350 1786 . - . ID=gene-C9E93_RS23395;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=C9E93_RS23395;old_locus_tag=C9E93_24030 NZ_PYJV01000130.1 Protein Homology CDS 350 1786 . - 0 ID=cds-WP_135370137.1;Parent=gene-C9E93_RS23395;Dbxref=GenBank:WP_135370137.1;Name=WP_135370137.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592082.1;locus_tag=C9E93_RS23395;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_135370137.1;transl_table=11 NZ_PYJV01000130.1 RefSeq gene 1839 2396 . - . ID=gene-C9E93_RS23400;Name=bfpA;gbkey=Gene;gene=bfpA;gene_biotype=protein_coding;locus_tag=C9E93_RS23400;old_locus_tag=C9E93_24035 NZ_PYJV01000130.1 Protein Homology CDS 1839 2396 . - 0 ID=cds-WP_023214922.1;Parent=gene-C9E93_RS23400;Dbxref=GenBank:WP_023214922.1;Name=WP_023214922.1;gbkey=CDS;gene=bfpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243508.1;locus_tag=C9E93_RS23400;product=type IV pilus major subunit protein BfpA;protein_id=WP_023214922.1;transl_table=11 NZ_PYJV01000130.1 RefSeq gene 2799 3104 . - . ID=gene-C9E93_RS23405;Name=C9E93_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS23405;old_locus_tag=C9E93_24040 NZ_PYJV01000130.1 Protein Homology CDS 2799 3104 . - 0 ID=cds-WP_135369928.1;Parent=gene-C9E93_RS23405;Dbxref=GenBank:WP_135369928.1;Name=WP_135369928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=C9E93_RS23405;product=conjugal transfer protein TraD;protein_id=WP_135369928.1;transl_table=11 ##sequence-region NZ_PYJV01000109.1 1 100373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2565187 NZ_PYJV01000109.1 RefSeq region 1 100373 . + . ID=NZ_PYJV01000109.1:1..100373;Dbxref=taxon:2565187;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wernigerode;strain=98se;sub-species=enterica NZ_PYJV01000109.1 RefSeq gene 137 505 . - . ID=gene-C9E93_RS18645;Name=C9E93_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18645;old_locus_tag=C9E93_19140 NZ_PYJV01000109.1 Protein Homology CDS 137 505 . - 0 ID=cds-WP_000174966.1;Parent=gene-C9E93_RS18645;Dbxref=GenBank:WP_000174966.1;Name=WP_000174966.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=C9E93_RS18645;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000174966.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 502 723 . - . ID=gene-C9E93_RS18650;Name=C9E93_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18650;old_locus_tag=C9E93_19145 NZ_PYJV01000109.1 Protein Homology CDS 502 723 . - 0 ID=cds-WP_165901231.1;Parent=gene-C9E93_RS18650;Dbxref=GenBank:WP_165901231.1;Name=WP_165901231.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=C9E93_RS18650;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_165901231.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 778 1491 . - . ID=gene-C9E93_RS18655;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=C9E93_RS18655;old_locus_tag=C9E93_19150 NZ_PYJV01000109.1 Protein Homology CDS 778 1491 . - 0 ID=cds-WP_000416114.1;Parent=gene-C9E93_RS18655;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9E93_RS18655;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 1493 2260 . - . ID=gene-C9E93_RS18660;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9E93_RS18660;old_locus_tag=C9E93_19155 NZ_PYJV01000109.1 Protein Homology CDS 1493 2260 . - 0 ID=cds-WP_000082080.1;Parent=gene-C9E93_RS18660;Dbxref=GenBank:WP_000082080.1;Name=WP_000082080.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9E93_RS18660;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082080.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 2257 3534 . - . ID=gene-C9E93_RS18665;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9E93_RS18665;old_locus_tag=C9E93_19160 NZ_PYJV01000109.1 Protein Homology CDS 2257 3534 . - 0 ID=cds-WP_135370132.1;Parent=gene-C9E93_RS18665;Dbxref=GenBank:WP_135370132.1;Name=WP_135370132.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9E93_RS18665;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_135370132.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 3531 4457 . - . ID=gene-C9E93_RS18670;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9E93_RS18670;old_locus_tag=C9E93_19165 NZ_PYJV01000109.1 Protein Homology CDS 3531 4457 . - 0 ID=cds-WP_000003007.1;Parent=gene-C9E93_RS18670;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9E93_RS18670;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 4517 5626 . - . ID=gene-C9E93_RS18675;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9E93_RS18675;old_locus_tag=C9E93_19170 NZ_PYJV01000109.1 Protein Homology CDS 4517 5626 . - 0 ID=cds-WP_000822976.1;Parent=gene-C9E93_RS18675;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9E93_RS18675;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 6048 6431 . + . ID=gene-C9E93_RS18680;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9E93_RS18680;old_locus_tag=C9E93_19175 NZ_PYJV01000109.1 Protein Homology CDS 6048 6431 . + 0 ID=cds-WP_000778873.1;Parent=gene-C9E93_RS18680;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9E93_RS18680;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 6409 6543 . + . ID=gene-C9E93_RS18685;Name=C9E93_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18685;old_locus_tag=C9E93_19180 NZ_PYJV01000109.1 Protein Homology CDS 6409 6543 . + 0 ID=cds-WP_001517957.1;Parent=gene-C9E93_RS18685;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9E93_RS18685;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 6626 7729 . - . ID=gene-C9E93_RS18690;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9E93_RS18690;old_locus_tag=C9E93_19185 NZ_PYJV01000109.1 Protein Homology CDS 6626 7729 . - 0 ID=cds-WP_001528146.1;Parent=gene-C9E93_RS18690;Dbxref=GenBank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9E93_RS18690;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 8051 8905 . - . ID=gene-C9E93_RS18695;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9E93_RS18695;old_locus_tag=C9E93_19190 NZ_PYJV01000109.1 Protein Homology CDS 8051 8905 . - 0 ID=cds-WP_000159621.1;Parent=gene-C9E93_RS18695;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9E93_RS18695;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 9151 10206 . - . ID=gene-C9E93_RS18700;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9E93_RS18700;old_locus_tag=C9E93_19195 NZ_PYJV01000109.1 Protein Homology CDS 9151 10206 . - 0 ID=cds-WP_001081707.1;Parent=gene-C9E93_RS18700;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9E93_RS18700;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 10199 10867 . - . ID=gene-C9E93_RS18705;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9E93_RS18705;old_locus_tag=C9E93_19200 NZ_PYJV01000109.1 Protein Homology CDS 10199 10867 . - 0 ID=cds-WP_000617729.1;Parent=gene-C9E93_RS18705;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9E93_RS18705;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 10870 12345 . - . ID=gene-C9E93_RS18710;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=C9E93_RS18710;old_locus_tag=C9E93_19205 NZ_PYJV01000109.1 Protein Homology CDS 10870 12345 . - 0 ID=cds-WP_135370131.1;Parent=gene-C9E93_RS18710;Dbxref=GenBank:WP_135370131.1;Name=WP_135370131.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9E93_RS18710;product=signal recognition particle-docking protein FtsY;protein_id=WP_135370131.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 12471 13067 . + . ID=gene-C9E93_RS18715;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9E93_RS18715;old_locus_tag=C9E93_19210 NZ_PYJV01000109.1 Protein Homology CDS 12471 13067 . + 0 ID=cds-WP_000743275.1;Parent=gene-C9E93_RS18715;Dbxref=GenBank:WP_000743275.1;Name=WP_000743275.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9E93_RS18715;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743275.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 13057 13326 . + . ID=gene-C9E93_RS18720;Name=C9E93_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18720;old_locus_tag=C9E93_19215 NZ_PYJV01000109.1 Protein Homology CDS 13057 13326 . + 0 ID=cds-WP_000906757.1;Parent=gene-C9E93_RS18720;Dbxref=GenBank:WP_000906757.1;Name=WP_000906757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9E93_RS18720;product=DUF1145 family protein;protein_id=WP_000906757.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 13348 13719 . - . ID=gene-C9E93_RS18725;Name=C9E93_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18725;old_locus_tag=C9E93_19220 NZ_PYJV01000109.1 Protein Homology CDS 13348 13719 . - 0 ID=cds-WP_000042855.1;Parent=gene-C9E93_RS18725;Dbxref=GenBank:WP_000042855.1;Name=WP_000042855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9E93_RS18725;product=DUF2500 domain-containing protein;protein_id=WP_000042855.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 13861 14487 . + . ID=gene-C9E93_RS18730;Name=C9E93_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18730;old_locus_tag=C9E93_19225 NZ_PYJV01000109.1 Protein Homology CDS 13861 14487 . + 0 ID=cds-WP_000964735.1;Parent=gene-C9E93_RS18730;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9E93_RS18730;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 14568 16766 . + . ID=gene-C9E93_RS18735;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9E93_RS18735;old_locus_tag=C9E93_19230 NZ_PYJV01000109.1 Protein Homology CDS 14568 16766 . + 0 ID=cds-WP_135370130.1;Parent=gene-C9E93_RS18735;Dbxref=GenBank:WP_135370130.1;Name=WP_135370130.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=C9E93_RS18735;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_135370130.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 16966 18609 . + . ID=gene-C9E93_RS18740;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=C9E93_RS18740;old_locus_tag=C9E93_19235 NZ_PYJV01000109.1 Protein Homology CDS 16966 18609 . + 0 ID=cds-WP_000789678.1;Parent=gene-C9E93_RS18740;Dbxref=GenBank:WP_000789678.1;Name=WP_000789678.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9E93_RS18740;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789678.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 18633 18878 . - . ID=gene-C9E93_RS18745;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9E93_RS18745;old_locus_tag=C9E93_19240 NZ_PYJV01000109.1 Protein Homology CDS 18633 18878 . - 0 ID=cds-WP_001541054.1;Parent=gene-C9E93_RS18745;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9E93_RS18745;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 19048 19713 . + . ID=gene-C9E93_RS18750;Name=C9E93_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18750;old_locus_tag=C9E93_19245 NZ_PYJV01000109.1 Protein Homology CDS 19048 19713 . + 0 ID=cds-WP_045902118.1;Parent=gene-C9E93_RS18750;Dbxref=GenBank:WP_045902118.1;Name=WP_045902118.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9E93_RS18750;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_045902118.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 19786 20343 . + . ID=gene-C9E93_RS18755;Name=C9E93_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18755;old_locus_tag=C9E93_19250 NZ_PYJV01000109.1 Protein Homology CDS 19786 20343 . + 0 ID=cds-WP_045902045.1;Parent=gene-C9E93_RS18755;Dbxref=GenBank:WP_045902045.1;Name=WP_045902045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9E93_RS18755;product=DcrB family lipoprotein;protein_id=WP_045902045.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 20347 21606 . - . ID=gene-C9E93_RS18760;Name=C9E93_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18760;old_locus_tag=C9E93_19255 NZ_PYJV01000109.1 Protein Homology CDS 20347 21606 . - 0 ID=cds-WP_077906124.1;Parent=gene-C9E93_RS18760;Dbxref=GenBank:WP_077906124.1;Name=WP_077906124.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9E93_RS18760;product=MFS transporter;protein_id=WP_077906124.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 21696 22745 . + . ID=gene-C9E93_RS18765;Name=C9E93_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18765;old_locus_tag=C9E93_19260 NZ_PYJV01000109.1 Protein Homology CDS 21696 22745 . + 0 ID=cds-WP_000179588.1;Parent=gene-C9E93_RS18765;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9E93_RS18765;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 22797 23375 . + . ID=gene-C9E93_RS18770;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9E93_RS18770;old_locus_tag=C9E93_19265 NZ_PYJV01000109.1 Protein Homology CDS 22797 23375 . + 0 ID=cds-WP_000284371.1;Parent=gene-C9E93_RS18770;Dbxref=GenBank:WP_000284371.1;Name=WP_000284371.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9E93_RS18770;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284371.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 23467 23868 . + . ID=gene-C9E93_RS18775;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9E93_RS18775;old_locus_tag=C9E93_19270 NZ_PYJV01000109.1 Protein Homology CDS 23467 23868 . + 0 ID=cds-WP_001190057.1;Parent=gene-C9E93_RS18775;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9E93_RS18775;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 23970 25094 . - . ID=gene-C9E93_RS18780;Name=C9E93_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18780;old_locus_tag=C9E93_19275 NZ_PYJV01000109.1 Protein Homology CDS 23970 25094 . - 0 ID=cds-WP_001214753.1;Parent=gene-C9E93_RS18780;Dbxref=GenBank:WP_001214753.1;Name=WP_001214753.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9E93_RS18780;product=ABC transporter permease;protein_id=WP_001214753.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 25094 27835 . - . ID=gene-C9E93_RS18785;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9E93_RS18785;old_locus_tag=C9E93_19280 NZ_PYJV01000109.1 Protein Homology CDS 25094 27835 . - 0 ID=cds-WP_000202924.1;Parent=gene-C9E93_RS18785;Dbxref=GenBank:WP_000202924.1;Name=WP_000202924.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=C9E93_RS18785;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202924.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 27832 28899 . - . ID=gene-C9E93_RS18790;Name=C9E93_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18790;old_locus_tag=C9E93_19285 NZ_PYJV01000109.1 Protein Homology CDS 27832 28899 . - 0 ID=cds-WP_000359836.1;Parent=gene-C9E93_RS18790;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9E93_RS18790;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 29205 30401 . - . ID=gene-C9E93_RS18795;Name=C9E93_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18795;old_locus_tag=C9E93_19290 NZ_PYJV01000109.1 Protein Homology CDS 29205 30401 . - 0 ID=cds-WP_000439230.1;Parent=gene-C9E93_RS18795;Dbxref=GenBank:WP_000439230.1;Name=WP_000439230.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9E93_RS18795;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439230.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 30632 32128 . + . ID=gene-C9E93_RS18800;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9E93_RS18800;old_locus_tag=C9E93_19295 NZ_PYJV01000109.1 Protein Homology CDS 30632 32128 . + 0 ID=cds-WP_000902764.1;Parent=gene-C9E93_RS18800;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9E93_RS18800;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 32269 32604 . - . ID=gene-C9E93_RS18805;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9E93_RS18805;old_locus_tag=C9E93_19300 NZ_PYJV01000109.1 Protein Homology CDS 32269 32604 . - 0 ID=cds-WP_000626193.1;Parent=gene-C9E93_RS18805;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9E93_RS18805;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 32992 33426 . + . ID=gene-C9E93_RS18810;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9E93_RS18810;old_locus_tag=C9E93_19305 NZ_PYJV01000109.1 Protein Homology CDS 32992 33426 . + 0 ID=cds-WP_000323565.1;Parent=gene-C9E93_RS18810;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9E93_RS18810;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 33751 35223 . + . ID=gene-C9E93_RS18815;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9E93_RS18815;old_locus_tag=C9E93_19310 NZ_PYJV01000109.1 Protein Homology CDS 33751 35223 . + 0 ID=cds-WP_001098280.1;Parent=gene-C9E93_RS18815;Dbxref=GenBank:WP_001098280.1;Name=WP_001098280.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9E93_RS18815;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098280.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 35315 36073 . - . ID=gene-C9E93_RS18820;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9E93_RS18820;old_locus_tag=C9E93_19315 NZ_PYJV01000109.1 Protein Homology CDS 35315 36073 . - 0 ID=cds-WP_001165127.1;Parent=gene-C9E93_RS18820;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9E93_RS18820;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 36080 38122 . - . ID=gene-C9E93_RS18825;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=C9E93_RS18825;old_locus_tag=C9E93_19320 NZ_PYJV01000109.1 Protein Homology CDS 36080 38122 . - 0 ID=cds-WP_000184178.1;Parent=gene-C9E93_RS18825;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9E93_RS18825;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 38285 38938 . - . ID=gene-C9E93_RS18830;Name=C9E93_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18830;old_locus_tag=C9E93_19325 NZ_PYJV01000109.1 Protein Homology CDS 38285 38938 . - 0 ID=cds-WP_000469190.1;Parent=gene-C9E93_RS18830;Dbxref=GenBank:WP_000469190.1;Name=WP_000469190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=C9E93_RS18830;product=hypothetical protein;protein_id=WP_000469190.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 39216 39659 . + . ID=gene-C9E93_RS18835;Name=C9E93_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18835;old_locus_tag=C9E93_19330 NZ_PYJV01000109.1 Protein Homology CDS 39216 39659 . + 0 ID=cds-WP_167851643.1;Parent=gene-C9E93_RS18835;Dbxref=GenBank:WP_167851643.1;Name=WP_167851643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209569.1;locus_tag=C9E93_RS18835;product=hypothetical protein;protein_id=WP_167851643.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 39780 40622 . + . ID=gene-C9E93_RS18840;Name=C9E93_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18840;old_locus_tag=C9E93_19335 NZ_PYJV01000109.1 Protein Homology CDS 39780 40622 . + 0 ID=cds-WP_000954235.1;Parent=gene-C9E93_RS18840;Dbxref=GenBank:WP_000954235.1;Name=WP_000954235.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9E93_RS18840;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 40727 42079 . + . ID=gene-C9E93_RS18845;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9E93_RS18845;old_locus_tag=C9E93_19340 NZ_PYJV01000109.1 Protein Homology CDS 40727 42079 . + 0 ID=cds-WP_000160778.1;Parent=gene-C9E93_RS18845;Dbxref=GenBank:WP_000160778.1;Name=WP_000160778.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9E93_RS18845;product=glutathione-disulfide reductase;protein_id=WP_000160778.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 42126 43169 . - . ID=gene-C9E93_RS18850;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=C9E93_RS18850;old_locus_tag=C9E93_19345 NZ_PYJV01000109.1 Protein Homology CDS 42126 43169 . - 0 ID=cds-WP_000702755.1;Parent=gene-C9E93_RS18850;Dbxref=GenBank:WP_000702755.1;Name=WP_000702755.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E93_RS18850;product=fructose-asparagine asparaginase;protein_id=WP_000702755.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 43228 44547 . - . ID=gene-C9E93_RS18855;Name=C9E93_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18855;old_locus_tag=C9E93_19350 NZ_PYJV01000109.1 Protein Homology CDS 43228 44547 . - 0 ID=cds-WP_000498935.1;Parent=gene-C9E93_RS18855;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9E93_RS18855;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 44601 45446 . - . ID=gene-C9E93_RS18860;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9E93_RS18860;old_locus_tag=C9E93_19355 NZ_PYJV01000109.1 Protein Homology CDS 44601 45446 . - 0 ID=cds-WP_023227415.1;Parent=gene-C9E93_RS18860;Dbxref=GenBank:WP_023227415.1;Name=WP_023227415.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9E93_RS18860;product=fructose-aspartate kinase;protein_id=WP_023227415.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 45510 46487 . - . ID=gene-C9E93_RS18865;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9E93_RS18865;old_locus_tag=C9E93_19360 NZ_PYJV01000109.1 Protein Homology CDS 45510 46487 . - 0 ID=cds-WP_135370129.1;Parent=gene-C9E93_RS18865;Dbxref=GenBank:WP_135370129.1;Name=WP_135370129.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9E93_RS18865;product=6-phosphofructose-aspartate deglycase;protein_id=WP_135370129.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 46663 47382 . - . ID=gene-C9E93_RS18870;Name=C9E93_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18870;old_locus_tag=C9E93_19365 NZ_PYJV01000109.1 Protein Homology CDS 46663 47382 . - 0 ID=cds-WP_000572565.1;Parent=gene-C9E93_RS18870;Dbxref=GenBank:WP_000572565.1;Name=WP_000572565.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9E93_RS18870;product=GntR family transcriptional regulator;protein_id=WP_000572565.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 47708 49357 . + . ID=gene-C9E93_RS18875;Name=C9E93_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18875;old_locus_tag=C9E93_19370 NZ_PYJV01000109.1 Protein Homology CDS 47708 49357 . + 0 ID=cds-WP_000934254.1;Parent=gene-C9E93_RS18875;Dbxref=GenBank:WP_000934254.1;Name=WP_000934254.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9E93_RS18875;product=alpha%2Calpha-trehalase;protein_id=WP_000934254.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 49370 50959 . - . ID=gene-C9E93_RS18880;Name=C9E93_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18880;old_locus_tag=C9E93_19375 NZ_PYJV01000109.1 Protein Homology CDS 49370 50959 . - 0 ID=cds-WP_135370128.1;Parent=gene-C9E93_RS18880;Dbxref=GenBank:WP_135370128.1;Name=WP_135370128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9E93_RS18880;product=STY4199 family HEPN domain-containing protein;protein_id=WP_135370128.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 51240 51596 . + . ID=gene-C9E93_RS18885;Name=C9E93_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18885;old_locus_tag=C9E93_19380 NZ_PYJV01000109.1 Protein Homology CDS 51240 51596 . + 0 ID=cds-WP_001120251.1;Parent=gene-C9E93_RS18885;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9E93_RS18885;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 51602 52204 . - . ID=gene-C9E93_RS18890;Name=C9E93_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18890;old_locus_tag=C9E93_19385 NZ_PYJV01000109.1 Protein Homology CDS 51602 52204 . - 0 ID=cds-WP_001196081.1;Parent=gene-C9E93_RS18890;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9E93_RS18890;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 52835 53734 . + . ID=gene-C9E93_RS18895;Name=C9E93_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18895;old_locus_tag=C9E93_19390 NZ_PYJV01000109.1 Protein Homology CDS 52835 53734 . + 0 ID=cds-WP_023206993.1;Parent=gene-C9E93_RS18895;Dbxref=GenBank:WP_023206993.1;Name=WP_023206993.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9E93_RS18895;product=LysR family transcriptional regulator;protein_id=WP_023206993.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 53807 54835 . + . ID=gene-C9E93_RS18900;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9E93_RS18900;old_locus_tag=C9E93_19395 NZ_PYJV01000109.1 Protein Homology CDS 53807 54835 . + 0 ID=cds-WP_000191231.1;Parent=gene-C9E93_RS18900;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9E93_RS18900;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 55186 56508 . + . ID=gene-C9E93_RS18905;Name=C9E93_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18905;old_locus_tag=C9E93_19400 NZ_PYJV01000109.1 Protein Homology CDS 55186 56508 . + 0 ID=cds-WP_001148981.1;Parent=gene-C9E93_RS18905;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9E93_RS18905;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 56548 58608 . - . ID=gene-C9E93_RS18910;Name=C9E93_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18910;old_locus_tag=C9E93_19405 NZ_PYJV01000109.1 Protein Homology CDS 56548 58608 . - 0 ID=cds-WP_000158674.1;Parent=gene-C9E93_RS18910;Dbxref=GenBank:WP_000158674.1;Name=WP_000158674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9E93_RS18910;product=AsmA family protein;protein_id=WP_000158674.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 58718 59485 . - . ID=gene-C9E93_RS18915;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9E93_RS18915;old_locus_tag=C9E93_19410 NZ_PYJV01000109.1 Protein Homology CDS 58718 59485 . - 0 ID=cds-WP_000595626.1;Parent=gene-C9E93_RS18915;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9E93_RS18915;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 59714 60643 . + . ID=gene-C9E93_RS18920;Name=C9E93_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18920;old_locus_tag=C9E93_19415 NZ_PYJV01000109.1 Protein Homology CDS 59714 60643 . + 0 ID=cds-WP_000037583.1;Parent=gene-C9E93_RS18920;Dbxref=GenBank:WP_000037583.1;Name=WP_000037583.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9E93_RS18920;product=sugar kinase;protein_id=WP_000037583.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 60697 62184 . - . ID=gene-C9E93_RS18925;Name=C9E93_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18925;old_locus_tag=C9E93_19420 NZ_PYJV01000109.1 Protein Homology CDS 60697 62184 . - 0 ID=cds-WP_001163182.1;Parent=gene-C9E93_RS18925;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9E93_RS18925;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 62404 63690 . - . ID=gene-C9E93_RS18930;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9E93_RS18930;old_locus_tag=C9E93_19425 NZ_PYJV01000109.1 Protein Homology CDS 62404 63690 . - 0 ID=cds-WP_000858228.1;Parent=gene-C9E93_RS18930;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9E93_RS18930;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 63848 65854 . - . ID=gene-C9E93_RS18935;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9E93_RS18935;old_locus_tag=C9E93_19430 NZ_PYJV01000109.1 Protein Homology CDS 63848 65854 . - 0 ID=cds-WP_135370670.1;Parent=gene-C9E93_RS18935;Dbxref=GenBank:WP_135370670.1;Name=WP_135370670.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9E93_RS18935;product=biofilm formation regulator HmsP;protein_id=WP_135370670.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 66028 69570 . - . ID=gene-C9E93_RS18945;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=C9E93_RS18945;old_locus_tag=C9E93_19440 NZ_PYJV01000109.1 Protein Homology CDS 66028 69570 . - 0 ID=cds-WP_135370669.1;Parent=gene-C9E93_RS18945;Dbxref=GenBank:WP_135370669.1;Name=WP_135370669.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9E93_RS18945;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_135370669.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 69552 70661 . - . ID=gene-C9E93_RS18950;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9E93_RS18950;old_locus_tag=C9E93_19445 NZ_PYJV01000109.1 Protein Homology CDS 69552 70661 . - 0 ID=cds-WP_000988802.1;Parent=gene-C9E93_RS18950;Dbxref=GenBank:WP_000988802.1;Name=WP_000988802.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9E93_RS18950;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988802.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 70665 72965 . - . ID=gene-C9E93_RS18955;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9E93_RS18955;old_locus_tag=C9E93_19450 NZ_PYJV01000109.1 Protein Homology CDS 70665 72965 . - 0 ID=cds-WP_135370668.1;Parent=gene-C9E93_RS18955;Dbxref=GenBank:WP_135370668.1;Name=WP_135370668.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9E93_RS18955;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_135370668.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 72976 75600 . - . ID=gene-C9E93_RS18960;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9E93_RS18960;old_locus_tag=C9E93_19455 NZ_PYJV01000109.1 Protein Homology CDS 72976 75600 . - 0 ID=cds-WP_001275347.1;Parent=gene-C9E93_RS18960;Dbxref=GenBank:WP_001275347.1;Name=WP_001275347.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9E93_RS18960;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275347.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 75597 76349 . - . ID=gene-C9E93_RS18965;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9E93_RS18965;old_locus_tag=C9E93_19460 NZ_PYJV01000109.1 Protein Homology CDS 75597 76349 . - 0 ID=cds-WP_000996115.1;Parent=gene-C9E93_RS18965;Dbxref=GenBank:WP_000996115.1;Name=WP_000996115.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9E93_RS18965;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996115.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 76350 76553 . - . ID=gene-C9E93_RS18970;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9E93_RS18970;old_locus_tag=C9E93_19465 NZ_PYJV01000109.1 Protein Homology CDS 76350 76553 . - 0 ID=cds-WP_000282616.1;Parent=gene-C9E93_RS18970;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9E93_RS18970;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 76798 78369 . + . ID=gene-C9E93_RS18975;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9E93_RS18975;old_locus_tag=C9E93_19470 NZ_PYJV01000109.1 Protein Homology CDS 76798 78369 . + 0 ID=cds-WP_001205767.1;Parent=gene-C9E93_RS18975;Dbxref=GenBank:WP_001205767.1;Name=WP_001205767.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9E93_RS18975;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205767.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 78366 78557 . + . ID=gene-C9E93_RS18980;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9E93_RS18980;old_locus_tag=C9E93_19475 NZ_PYJV01000109.1 Protein Homology CDS 78366 78557 . + 0 ID=cds-WP_000988321.1;Parent=gene-C9E93_RS18980;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9E93_RS18980;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 78554 80233 . + . ID=gene-C9E93_RS18985;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9E93_RS18985;old_locus_tag=C9E93_19480 NZ_PYJV01000109.1 Protein Homology CDS 78554 80233 . + 0 ID=cds-WP_000192022.1;Parent=gene-C9E93_RS18985;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9E93_RS18985;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 80315 80422 . - . ID=gene-C9E93_RS18990;Name=C9E93_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS18990;old_locus_tag=C9E93_19485 NZ_PYJV01000109.1 Protein Homology CDS 80315 80422 . - 0 ID=cds-WP_001537650.1;Parent=gene-C9E93_RS18990;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9E93_RS18990;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_PYJV01000109.1 RefSeq pseudogene 80795 80947 . + . ID=gene-C9E93_RS23985;Name=C9E93_RS23985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E93_RS23985;partial=true;pseudo=true;start_range=.,80795 NZ_PYJV01000109.1 Protein Homology CDS 80795 80947 . + 0 ID=cds-C9E93_RS23985;Parent=gene-C9E93_RS23985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=C9E93_RS23985;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,80795;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 81065 82363 . + . ID=gene-C9E93_RS19000;Name=C9E93_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19000;old_locus_tag=C9E93_19495 NZ_PYJV01000109.1 Protein Homology CDS 81065 82363 . + 0 ID=cds-WP_001150175.1;Parent=gene-C9E93_RS19000;Dbxref=GenBank:WP_001150175.1;Name=WP_001150175.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9E93_RS19000;product=aromatic amino acid transport family protein;protein_id=WP_001150175.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 82464 83477 . - . ID=gene-C9E93_RS19005;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9E93_RS19005;old_locus_tag=C9E93_19500 NZ_PYJV01000109.1 Protein Homology CDS 82464 83477 . - 0 ID=cds-WP_135370667.1;Parent=gene-C9E93_RS19005;Dbxref=GenBank:WP_135370667.1;Name=WP_135370667.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9E93_RS19005;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_135370667.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 83474 84457 . - . ID=gene-C9E93_RS19010;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9E93_RS19010;old_locus_tag=C9E93_19505 NZ_PYJV01000109.1 Protein Homology CDS 83474 84457 . - 0 ID=cds-WP_001196509.1;Parent=gene-C9E93_RS19010;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9E93_RS19010;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 84468 85370 . - . ID=gene-C9E93_RS19015;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9E93_RS19015;old_locus_tag=C9E93_19510 NZ_PYJV01000109.1 Protein Homology CDS 84468 85370 . - 0 ID=cds-WP_000084690.1;Parent=gene-C9E93_RS19015;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9E93_RS19015;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 85380 86399 . - . ID=gene-C9E93_RS19020;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9E93_RS19020;old_locus_tag=C9E93_19515 NZ_PYJV01000109.1 Protein Homology CDS 85380 86399 . - 0 ID=cds-WP_000938843.1;Parent=gene-C9E93_RS19020;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9E93_RS19020;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 86556 88163 . - . ID=gene-C9E93_RS19025;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=C9E93_RS19025;old_locus_tag=C9E93_19520 NZ_PYJV01000109.1 Protein Homology CDS 86556 88163 . - 0 ID=cds-WP_000028047.1;Parent=gene-C9E93_RS19025;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9E93_RS19025;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 88719 90044 . - . ID=gene-C9E93_RS19030;Name=C9E93_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19030;old_locus_tag=C9E93_19525 NZ_PYJV01000109.1 Protein Homology CDS 88719 90044 . - 0 ID=cds-WP_001136080.1;Parent=gene-C9E93_RS19030;Dbxref=GenBank:WP_001136080.1;Name=WP_001136080.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9E93_RS19030;product=uracil-xanthine permease family protein;protein_id=WP_001136080.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 90102 91226 . - . ID=gene-C9E93_RS19035;Name=C9E93_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19035;old_locus_tag=C9E93_19530 NZ_PYJV01000109.1 Protein Homology CDS 90102 91226 . - 0 ID=cds-WP_000940825.1;Parent=gene-C9E93_RS19035;Dbxref=GenBank:WP_000940825.1;Name=WP_000940825.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9E93_RS19035;product=aryl-sulfate sulfotransferase;protein_id=WP_000940825.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 91376 92383 . + . ID=gene-C9E93_RS19040;Name=C9E93_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E93_RS19040;old_locus_tag=C9E93_19535 NZ_PYJV01000109.1 Protein Homology CDS 91376 92383 . + 0 ID=cds-WP_023195897.1;Parent=gene-C9E93_RS19040;Dbxref=GenBank:WP_023195897.1;Name=WP_023195897.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9E93_RS19040;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023195897.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 92374 92492 . - . ID=gene-C9E93_RS19045;Name=C9E93_RS19045;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS19045;old_locus_tag=C9E93_19540 NZ_PYJV01000109.1 cmsearch ncRNA 92374 92492 . - . ID=rna-C9E93_RS19045;Parent=gene-C9E93_RS19045;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19045;product=RtT sRNA NZ_PYJV01000109.1 cmsearch exon 92374 92492 . - . ID=exon-C9E93_RS19045-1;Parent=rna-C9E93_RS19045;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19045;product=RtT sRNA NZ_PYJV01000109.1 RefSeq gene 92527 92660 . - . ID=gene-C9E93_RS19050;Name=C9E93_RS19050;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E93_RS19050;old_locus_tag=C9E93_19545 NZ_PYJV01000109.1 cmsearch ncRNA 92527 92660 . - . ID=rna-C9E93_RS19050;Parent=gene-C9E93_RS19050;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19050;product=RtT sRNA NZ_PYJV01000109.1 cmsearch exon 92527 92660 . - . ID=exon-C9E93_RS19050-1;Parent=rna-C9E93_RS19050;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E93_RS19050;product=RtT sRNA NZ_PYJV01000109.1 RefSeq gene 92695 92771 . - . ID=gene-C9E93_RS19055;Name=C9E93_RS19055;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E93_RS19055;old_locus_tag=C9E93_19550 NZ_PYJV01000109.1 tRNAscan-SE tRNA 92695 92771 . - . ID=rna-C9E93_RS19055;Parent=gene-C9E93_RS19055;anticodon=(pos:complement(92735..92737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19055;product=tRNA-Pro NZ_PYJV01000109.1 tRNAscan-SE exon 92695 92771 . - . ID=exon-C9E93_RS19055-1;Parent=rna-C9E93_RS19055;anticodon=(pos:complement(92735..92737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E93_RS19055;product=tRNA-Pro NZ_PYJV01000109.1 RefSeq gene 92862 94553 . - . ID=gene-C9E93_RS19060;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9E93_RS19060;old_locus_tag=C9E93_19555 NZ_PYJV01000109.1 Protein Homology CDS 92862 94553 . - 0 ID=cds-WP_135370666.1;Parent=gene-C9E93_RS19060;Dbxref=GenBank:WP_135370666.1;Name=WP_135370666.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9E93_RS19060;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_135370666.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 94771 95298 . - . ID=gene-C9E93_RS19065;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=C9E93_RS19065;old_locus_tag=C9E93_19560 NZ_PYJV01000109.1 Protein Homology CDS 94771 95298 . - 0 ID=cds-WP_000792957.1;Parent=gene-C9E93_RS19065;Dbxref=GenBank:WP_000792957.1;Name=WP_000792957.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=C9E93_RS19065;product=long polar fimbrial protein LpfE;protein_id=WP_000792957.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 95304 96383 . - . ID=gene-C9E93_RS19070;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=C9E93_RS19070;old_locus_tag=C9E93_19565 NZ_PYJV01000109.1 Protein Homology CDS 95304 96383 . - 0 ID=cds-WP_000914255.1;Parent=gene-C9E93_RS19070;Dbxref=GenBank:WP_000914255.1;Name=WP_000914255.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=C9E93_RS19070;product=long polar fimbrial protein LpfD;protein_id=WP_000914255.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 96401 98929 . - . ID=gene-C9E93_RS19075;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=C9E93_RS19075;old_locus_tag=C9E93_19570 NZ_PYJV01000109.1 Protein Homology CDS 96401 98929 . - 0 ID=cds-WP_000220312.1;Parent=gene-C9E93_RS19075;Dbxref=GenBank:WP_000220312.1;Name=WP_000220312.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=C9E93_RS19075;product=outer membrane usher protein LpfC;protein_id=WP_000220312.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 98952 99650 . - . ID=gene-C9E93_RS19080;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=C9E93_RS19080;old_locus_tag=C9E93_19575 NZ_PYJV01000109.1 Protein Homology CDS 98952 99650 . - 0 ID=cds-WP_001082123.1;Parent=gene-C9E93_RS19080;Dbxref=GenBank:WP_001082123.1;Name=WP_001082123.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=C9E93_RS19080;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082123.1;transl_table=11 NZ_PYJV01000109.1 RefSeq gene 99735 100259 . - . ID=gene-C9E93_RS19085;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=C9E93_RS19085;old_locus_tag=C9E93_19580 NZ_PYJV01000109.1 Protein Homology CDS 99735 100259 . - 0 ID=cds-WP_001519917.1;Parent=gene-C9E93_RS19085;Dbxref=GenBank:WP_001519917.1;Name=WP_001519917.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=C9E93_RS19085;product=long polar fimbria major subunit LpfA;protein_id=WP_001519917.1;transl_table=11 ###