##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM474482v1
#!genome-build-accession NCBI_Assembly:GCF_004744825.1
#!annotation-date 06/11/2025 09:14:14
#!annotation-source NCBI RefSeq GCF_004744825.1-RS_2025_06_11
##sequence-region NZ_PYKC01000071.1 1 15291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000071.1	RefSeq	region	1	15291	.	+	.	ID=NZ_PYKC01000071.1:1..15291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000071.1	RefSeq	pseudogene	1	159	.	+	.	ID=gene-C9F00_RS12340;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=C9F00_RS12340;old_locus_tag=C9F00_12650;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000071.1	Protein Homology	CDS	1	159	.	+	0	ID=cds-C9F00_RS12340;Parent=gene-C9F00_RS12340;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F00_RS12340;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	389	772	.	+	.	ID=gene-C9F00_RS12345;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9F00_RS12345;old_locus_tag=C9F00_12655
NZ_PYKC01000071.1	Protein Homology	CDS	389	772	.	+	0	ID=cds-WP_001275691.1;Parent=gene-C9F00_RS12345;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9F00_RS12345;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	774	1319	.	+	.	ID=gene-C9F00_RS12350;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9F00_RS12350;old_locus_tag=C9F00_12660
NZ_PYKC01000071.1	Protein Homology	CDS	774	1319	.	+	0	ID=cds-WP_001287521.1;Parent=gene-C9F00_RS12350;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9F00_RS12350;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	1477	1905	.	+	.	ID=gene-C9F00_RS12355;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9F00_RS12355;old_locus_tag=C9F00_12665
NZ_PYKC01000071.1	Protein Homology	CDS	1477	1905	.	+	0	ID=cds-WP_001085926.1;Parent=gene-C9F00_RS12355;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9F00_RS12355;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	1909	2613	.	+	.	ID=gene-C9F00_RS12360;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=C9F00_RS12360;old_locus_tag=C9F00_12670
NZ_PYKC01000071.1	Protein Homology	CDS	1909	2613	.	+	0	ID=cds-WP_001096676.1;Parent=gene-C9F00_RS12360;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9F00_RS12360;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	3033	3530	.	+	.	ID=gene-C9F00_RS12365;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12365;old_locus_tag=C9F00_12680
NZ_PYKC01000071.1	Protein Homology	CDS	3033	3530	.	+	0	ID=cds-WP_001207203.1;Parent=gene-C9F00_RS12365;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9F00_RS12365;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	3597	3962	.	+	.	ID=gene-C9F00_RS12370;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9F00_RS12370;old_locus_tag=C9F00_12685
NZ_PYKC01000071.1	Protein Homology	CDS	3597	3962	.	+	0	ID=cds-WP_000028882.1;Parent=gene-C9F00_RS12370;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9F00_RS12370;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	4280	8308	.	+	.	ID=gene-C9F00_RS12375;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9F00_RS12375;old_locus_tag=C9F00_12690
NZ_PYKC01000071.1	Protein Homology	CDS	4280	8308	.	+	0	ID=cds-WP_000263105.1;Parent=gene-C9F00_RS12375;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9F00_RS12375;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	8385	12608	.	+	.	ID=gene-C9F00_RS12380;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9F00_RS12380;old_locus_tag=C9F00_12695
NZ_PYKC01000071.1	Protein Homology	CDS	8385	12608	.	+	0	ID=cds-WP_000653965.1;Parent=gene-C9F00_RS12380;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9F00_RS12380;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	12650	12976	.	+	.	ID=gene-C9F00_RS12385;Name=C9F00_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12385;old_locus_tag=C9F00_12700
NZ_PYKC01000071.1	Protein Homology	CDS	12650	12976	.	+	0	ID=cds-WP_015675457.1;Parent=gene-C9F00_RS12385;Dbxref=GenBank:WP_015675457.1;Name=WP_015675457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=C9F00_RS12385;product=hypothetical protein;protein_id=WP_015675457.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	12978	13322	.	-	.	ID=gene-C9F00_RS12390;Name=C9F00_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12390;old_locus_tag=C9F00_12705
NZ_PYKC01000071.1	Protein Homology	CDS	12978	13322	.	-	0	ID=cds-WP_135420100.1;Parent=gene-C9F00_RS12390;Dbxref=GenBank:WP_135420100.1;Name=WP_135420100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9F00_RS12390;product=cytoplasmic protein;protein_id=WP_135420100.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	pseudogene	13733	13917	.	+	.	ID=gene-C9F00_RS12395;Name=C9F00_RS12395;end_range=13917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS12395;old_locus_tag=C9F00_12710;partial=true;pseudo=true
NZ_PYKC01000071.1	Protein Homology	CDS	13733	13917	.	+	0	ID=cds-C9F00_RS12395;Parent=gene-C9F00_RS12395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=C9F00_RS12395;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000071.1	RefSeq	gene	14071	15204	.	-	.	ID=gene-C9F00_RS12400;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9F00_RS12400;old_locus_tag=C9F00_12715
NZ_PYKC01000071.1	Protein Homology	CDS	14071	15204	.	-	0	ID=cds-WP_135369424.1;Parent=gene-C9F00_RS12400;Dbxref=GenBank:WP_135369424.1;Name=WP_135369424.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9F00_RS12400;product=2-iminoacetate synthase ThiH;protein_id=WP_135369424.1;transl_table=11
NZ_PYKC01000071.1	RefSeq	pseudogene	15201	15291	.	-	.	ID=gene-C9F00_RS12405;Name=C9F00_RS12405;end_range=15291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS12405;old_locus_tag=C9F00_12720;partial=true;pseudo=true
NZ_PYKC01000071.1	Protein Homology	CDS	15201	15291	.	-	1	ID=cds-C9F00_RS12405;Parent=gene-C9F00_RS12405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9F00_RS12405;partial=true;product=thiazole synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000032.1 1 14546
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000032.1	RefSeq	region	1	14546	.	+	.	ID=NZ_PYKC01000032.1:1..14546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000032.1	RefSeq	gene	1	783	.	-	.	ID=gene-C9F00_RS05435;Name=C9F00_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05435;old_locus_tag=C9F00_05525;partial=true;start_range=.,1
NZ_PYKC01000032.1	Protein Homology	CDS	1	783	.	-	0	ID=cds-WP_135492179.1;Parent=gene-C9F00_RS05435;Dbxref=GenBank:WP_135492179.1;Name=WP_135492179.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9F00_RS05435;partial=true;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_135492179.1;start_range=.,1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	783	2024	.	-	.	ID=gene-C9F00_RS05440;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9F00_RS05440;old_locus_tag=C9F00_05530
NZ_PYKC01000032.1	Protein Homology	CDS	783	2024	.	-	0	ID=cds-WP_135492181.1;Parent=gene-C9F00_RS05440;Dbxref=GenBank:WP_135492181.1;Name=WP_135492181.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9F00_RS05440;product=cardiolipin synthase ClsB;protein_id=WP_135492181.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	2021	2779	.	-	.	ID=gene-C9F00_RS05445;Name=C9F00_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05445;old_locus_tag=C9F00_05535
NZ_PYKC01000032.1	Protein Homology	CDS	2021	2779	.	-	0	ID=cds-WP_000192039.1;Parent=gene-C9F00_RS05445;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9F00_RS05445;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	2912	3322	.	+	.	ID=gene-C9F00_RS05450;Name=C9F00_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05450;old_locus_tag=C9F00_05540
NZ_PYKC01000032.1	Protein Homology	CDS	2912	3322	.	+	0	ID=cds-WP_000871970.1;Parent=gene-C9F00_RS05450;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9F00_RS05450;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	3284	4390	.	-	.	ID=gene-C9F00_RS05455;Name=C9F00_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05455;old_locus_tag=C9F00_05545
NZ_PYKC01000032.1	Protein Homology	CDS	3284	4390	.	-	0	ID=cds-WP_000469050.1;Parent=gene-C9F00_RS05455;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9F00_RS05455;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	4490	5620	.	-	.	ID=gene-C9F00_RS05460;Name=C9F00_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05460;old_locus_tag=C9F00_05550
NZ_PYKC01000032.1	Protein Homology	CDS	4490	5620	.	-	0	ID=cds-WP_131040198.1;Parent=gene-C9F00_RS05460;Dbxref=GenBank:WP_131040198.1;Name=WP_131040198.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9F00_RS05460;product=ABC transporter permease;protein_id=WP_131040198.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	5613	7349	.	-	.	ID=gene-C9F00_RS05465;Name=C9F00_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05465;old_locus_tag=C9F00_05555
NZ_PYKC01000032.1	Protein Homology	CDS	5613	7349	.	-	0	ID=cds-WP_135369187.1;Parent=gene-C9F00_RS05465;Dbxref=GenBank:WP_135369187.1;Name=WP_135369187.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9F00_RS05465;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369187.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	7342	8337	.	-	.	ID=gene-C9F00_RS05470;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9F00_RS05470;old_locus_tag=C9F00_05560
NZ_PYKC01000032.1	Protein Homology	CDS	7342	8337	.	-	0	ID=cds-WP_135369186.1;Parent=gene-C9F00_RS05470;Dbxref=GenBank:WP_135369186.1;Name=WP_135369186.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9F00_RS05470;product=secretion protein HlyD;protein_id=WP_135369186.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	8337	9011	.	-	.	ID=gene-C9F00_RS05475;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9F00_RS05475;old_locus_tag=C9F00_05565
NZ_PYKC01000032.1	Protein Homology	CDS	8337	9011	.	-	0	ID=cds-WP_001025254.1;Parent=gene-C9F00_RS05475;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9F00_RS05475;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	9085	10008	.	-	.	ID=gene-C9F00_RS05480;Name=C9F00_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05480;old_locus_tag=C9F00_05570
NZ_PYKC01000032.1	Protein Homology	CDS	9085	10008	.	-	0	ID=cds-WP_001075547.1;Parent=gene-C9F00_RS05480;Dbxref=GenBank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=C9F00_RS05480;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	10347	11678	.	+	.	ID=gene-C9F00_RS05485;Name=C9F00_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05485;old_locus_tag=C9F00_05575
NZ_PYKC01000032.1	Protein Homology	CDS	10347	11678	.	+	0	ID=cds-WP_001518324.1;Parent=gene-C9F00_RS05485;Dbxref=GenBank:WP_001518324.1;Name=WP_001518324.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=C9F00_RS05485;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	11729	12478	.	+	.	ID=gene-C9F00_RS05490;Name=C9F00_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05490;old_locus_tag=C9F00_05580
NZ_PYKC01000032.1	Protein Homology	CDS	11729	12478	.	+	0	ID=cds-WP_000924697.1;Parent=gene-C9F00_RS05490;Dbxref=GenBank:WP_000924697.1;Name=WP_000924697.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=C9F00_RS05490;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000924697.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	gene	12492	13337	.	+	.	ID=gene-C9F00_RS05495;Name=C9F00_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05495;old_locus_tag=C9F00_05585
NZ_PYKC01000032.1	Protein Homology	CDS	12492	13337	.	+	0	ID=cds-WP_000784292.1;Parent=gene-C9F00_RS05495;Dbxref=GenBank:WP_000784292.1;Name=WP_000784292.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=C9F00_RS05495;product=transketolase;protein_id=WP_000784292.1;transl_table=11
NZ_PYKC01000032.1	RefSeq	pseudogene	13337	14328	.	+	.	ID=gene-C9F00_RS05500;Name=C9F00_RS05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS05500;old_locus_tag=C9F00_05590;pseudo=true
NZ_PYKC01000032.1	Protein Homology	CDS	13337	14328	.	+	0	ID=cds-C9F00_RS05500;Parent=gene-C9F00_RS05500;Note=frameshifted;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9F00_RS05500;product=transketolase family protein;pseudo=true;transl_table=11
NZ_PYKC01000032.1	RefSeq	pseudogene	14385	14546	.	+	.	ID=gene-C9F00_RS05505;Name=C9F00_RS05505;end_range=14546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS05505;old_locus_tag=C9F00_05595;partial=true;pseudo=true
NZ_PYKC01000032.1	Protein Homology	CDS	14385	14546	.	+	0	ID=cds-C9F00_RS05505;Parent=gene-C9F00_RS05505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668046.1;locus_tag=C9F00_RS05505;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000111.1 1 14520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000111.1	RefSeq	region	1	14520	.	+	.	ID=NZ_PYKC01000111.1:1..14520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000111.1	RefSeq	pseudogene	11	451	.	+	.	ID=gene-C9F00_RS17340;Name=tus;gbkey=Gene;gene=tus;gene_biotype=pseudogene;locus_tag=C9F00_RS17340;old_locus_tag=C9F00_17780;partial=true;pseudo=true;start_range=.,11
NZ_PYKC01000111.1	Protein Homology	CDS	11	451	.	+	0	ID=cds-C9F00_RS17340;Parent=gene-C9F00_RS17340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=C9F00_RS17340;partial=true;product=DNA replication terminus site-binding protein;pseudo=true;start_range=.,11;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	448	1851	.	-	.	ID=gene-C9F00_RS17345;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9F00_RS17345;old_locus_tag=C9F00_17785
NZ_PYKC01000111.1	Protein Homology	CDS	448	1851	.	-	0	ID=cds-WP_023259073.1;Parent=gene-C9F00_RS17345;Dbxref=GenBank:WP_023259073.1;Name=WP_023259073.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9F00_RS17345;product=class II fumarate hydratase;protein_id=WP_023259073.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	2019	3665	.	-	.	ID=gene-C9F00_RS17350;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9F00_RS17350;old_locus_tag=C9F00_17790
NZ_PYKC01000111.1	Protein Homology	CDS	2019	3665	.	-	0	ID=cds-WP_000066609.1;Parent=gene-C9F00_RS17350;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9F00_RS17350;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	3865	5040	.	+	.	ID=gene-C9F00_RS17355;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9F00_RS17355;old_locus_tag=C9F00_17795
NZ_PYKC01000111.1	Protein Homology	CDS	3865	5040	.	+	0	ID=cds-WP_001170618.1;Parent=gene-C9F00_RS17355;Dbxref=GenBank:WP_001170618.1;Name=WP_001170618.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9F00_RS17355;product=mannose-6-phosphate isomerase;protein_id=WP_001170618.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	5143	6651	.	+	.	ID=gene-C9F00_RS17360;Name=C9F00_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17360;old_locus_tag=C9F00_17800
NZ_PYKC01000111.1	Protein Homology	CDS	5143	6651	.	+	0	ID=cds-WP_135369664.1;Parent=gene-C9F00_RS17360;Dbxref=GenBank:WP_135369664.1;Name=WP_135369664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9F00_RS17360;product=YdgA family protein;protein_id=WP_135369664.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	pseudogene	6709	7311	.	-	.	ID=gene-C9F00_RS17365;Name=malI;end_range=7311,.;gbkey=Gene;gene=malI;gene_biotype=pseudogene;locus_tag=C9F00_RS17365;old_locus_tag=C9F00_17805;partial=true;pseudo=true
NZ_PYKC01000111.1	Protein Homology	CDS	6709	7311	.	-	0	ID=cds-C9F00_RS17365;Parent=gene-C9F00_RS17365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=7311,.;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=C9F00_RS17365;partial=true;product=Mal regulon transcriptional regulator MalI;pseudo=true;transl_table=11
NZ_PYKC01000111.1	RefSeq	pseudogene	7330	7704	.	+	.	ID=gene-C9F00_RS17370;Name=C9F00_RS17370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17370;old_locus_tag=C9F00_17810;partial=true;pseudo=true;start_range=.,7330
NZ_PYKC01000111.1	Protein Homology	CDS	7330	7704	.	+	0	ID=cds-C9F00_RS17370;Parent=gene-C9F00_RS17370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=C9F00_RS17370;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,7330;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	7922	8923	.	+	.	ID=gene-C9F00_RS17375;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9F00_RS17375;old_locus_tag=C9F00_17815
NZ_PYKC01000111.1	Protein Homology	CDS	7922	8923	.	+	0	ID=cds-WP_001649586.1;Parent=gene-C9F00_RS17375;Dbxref=GenBank:WP_001649586.1;Name=WP_001649586.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=C9F00_RS17375;product=adenosine deaminase;protein_id=WP_001649586.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	8997	10037	.	-	.	ID=gene-C9F00_RS17380;Name=C9F00_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17380;old_locus_tag=C9F00_17820
NZ_PYKC01000111.1	Protein Homology	CDS	8997	10037	.	-	0	ID=cds-WP_000998242.1;Parent=gene-C9F00_RS17380;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9F00_RS17380;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	10245	10370	.	+	.	ID=gene-C9F00_RS17385;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9F00_RS17385;old_locus_tag=C9F00_17825
NZ_PYKC01000111.1	Protein Homology	CDS	10245	10370	.	+	0	ID=cds-WP_001708800.1;Parent=gene-C9F00_RS17385;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9F00_RS17385;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	10668	10883	.	+	.	ID=gene-C9F00_RS17390;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9F00_RS17390;old_locus_tag=C9F00_17830
NZ_PYKC01000111.1	Protein Homology	CDS	10668	10883	.	+	0	ID=cds-WP_000217946.1;Parent=gene-C9F00_RS17390;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9F00_RS17390;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	10972	11412	.	+	.	ID=gene-C9F00_RS17395;Name=C9F00_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17395;old_locus_tag=C9F00_17835
NZ_PYKC01000111.1	Protein Homology	CDS	10972	11412	.	+	0	ID=cds-WP_000214061.1;Parent=gene-C9F00_RS17395;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9F00_RS17395;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	11489	12070	.	+	.	ID=gene-C9F00_RS17400;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9F00_RS17400;old_locus_tag=C9F00_17840
NZ_PYKC01000111.1	Protein Homology	CDS	11489	12070	.	+	0	ID=cds-WP_000133179.1;Parent=gene-C9F00_RS17400;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9F00_RS17400;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	12070	12648	.	+	.	ID=gene-C9F00_RS17405;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9F00_RS17405;old_locus_tag=C9F00_17845
NZ_PYKC01000111.1	Protein Homology	CDS	12070	12648	.	+	0	ID=cds-WP_001092597.1;Parent=gene-C9F00_RS17405;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9F00_RS17405;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11
NZ_PYKC01000111.1	RefSeq	gene	12641	14520	.	+	.	ID=gene-C9F00_RS17410;Name=rsxC;end_range=14520,.;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9F00_RS17410;old_locus_tag=C9F00_17850;partial=true
NZ_PYKC01000111.1	Protein Homology	CDS	12641	14520	.	+	0	ID=cds-WP_135492412.1;Parent=gene-C9F00_RS17410;Dbxref=GenBank:WP_135492412.1;Name=WP_135492412.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=14520,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F00_RS17410;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_135492412.1;transl_table=11
##sequence-region NZ_PYKC01000030.1 1 13595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000030.1	RefSeq	region	1	13595	.	+	.	ID=NZ_PYKC01000030.1:1..13595;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000030.1	RefSeq	gene	1	799	.	-	.	ID=gene-C9F00_RS05290;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9F00_RS05290;old_locus_tag=C9F00_05375;partial=true;start_range=.,1
NZ_PYKC01000030.1	Protein Homology	CDS	1	799	.	-	0	ID=cds-WP_135492169.1;Parent=gene-C9F00_RS05290;Dbxref=GenBank:WP_135492169.1;Name=WP_135492169.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9F00_RS05290;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_135492169.1;start_range=.,1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	796	1467	.	-	.	ID=gene-C9F00_RS05295;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9F00_RS05295;old_locus_tag=C9F00_05380
NZ_PYKC01000030.1	Protein Homology	CDS	796	1467	.	-	0	ID=cds-WP_001278025.1;Parent=gene-C9F00_RS05295;Dbxref=GenBank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9F00_RS05295;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	1464	2030	.	-	.	ID=gene-C9F00_RS05300;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9F00_RS05300;old_locus_tag=C9F00_05385
NZ_PYKC01000030.1	Protein Homology	CDS	1464	2030	.	-	0	ID=cds-WP_000115065.1;Parent=gene-C9F00_RS05300;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9F00_RS05300;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	2057	3511	.	-	.	ID=gene-C9F00_RS05305;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9F00_RS05305;old_locus_tag=C9F00_05390
NZ_PYKC01000030.1	Protein Homology	CDS	2057	3511	.	-	0	ID=cds-WP_135369152.1;Parent=gene-C9F00_RS05305;Dbxref=GenBank:WP_135369152.1;Name=WP_135369152.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9F00_RS05305;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_135369152.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	3943	5901	.	+	.	ID=gene-C9F00_RS05310;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9F00_RS05310;old_locus_tag=C9F00_05400
NZ_PYKC01000030.1	Protein Homology	CDS	3943	5901	.	+	0	ID=cds-WP_000083874.1;Parent=gene-C9F00_RS05310;Dbxref=GenBank:WP_000083874.1;Name=WP_000083874.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9F00_RS05310;product=acetate--CoA ligase;protein_id=WP_000083874.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	6141	6455	.	+	.	ID=gene-C9F00_RS05315;Name=C9F00_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05315;old_locus_tag=C9F00_05410
NZ_PYKC01000030.1	Protein Homology	CDS	6141	6455	.	+	0	ID=cds-WP_000999620.1;Parent=gene-C9F00_RS05315;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9F00_RS05315;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	6452	8101	.	+	.	ID=gene-C9F00_RS05320;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9F00_RS05320;old_locus_tag=C9F00_05415
NZ_PYKC01000030.1	Protein Homology	CDS	6452	8101	.	+	0	ID=cds-WP_000832536.1;Parent=gene-C9F00_RS05320;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9F00_RS05320;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	8140	8829	.	-	.	ID=gene-C9F00_RS05325;Name=C9F00_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05325;old_locus_tag=C9F00_05420
NZ_PYKC01000030.1	Protein Homology	CDS	8140	8829	.	-	0	ID=cds-WP_001067096.1;Parent=gene-C9F00_RS05325;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9F00_RS05325;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	8822	9232	.	-	.	ID=gene-C9F00_RS05330;Name=C9F00_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05330;old_locus_tag=C9F00_05425
NZ_PYKC01000030.1	Protein Homology	CDS	8822	9232	.	-	0	ID=cds-WP_000257347.1;Parent=gene-C9F00_RS05330;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9F00_RS05330;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	9336	10223	.	+	.	ID=gene-C9F00_RS05335;Name=C9F00_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05335;old_locus_tag=C9F00_05430
NZ_PYKC01000030.1	Protein Homology	CDS	9336	10223	.	+	0	ID=cds-WP_000354963.1;Parent=gene-C9F00_RS05335;Dbxref=GenBank:WP_000354963.1;Name=WP_000354963.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9F00_RS05335;product=LysR family transcriptional regulator;protein_id=WP_000354963.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	10318	11964	.	-	.	ID=gene-C9F00_RS05340;Name=C9F00_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05340;old_locus_tag=C9F00_05435
NZ_PYKC01000030.1	Protein Homology	CDS	10318	11964	.	-	0	ID=cds-WP_000402189.1;Parent=gene-C9F00_RS05340;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9F00_RS05340;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11
NZ_PYKC01000030.1	RefSeq	gene	12114	13595	.	-	.	ID=gene-C9F00_RS05350;Name=C9F00_RS05350;end_range=13595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05350;old_locus_tag=C9F00_05445;partial=true
NZ_PYKC01000030.1	Protein Homology	CDS	12114	13595	.	-	0	ID=cds-WP_135492171.1;Parent=gene-C9F00_RS05350;Dbxref=GenBank:WP_135492171.1;Name=WP_135492171.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=13595,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9F00_RS05350;partial=true;product=NCS2 family permease;protein_id=WP_135492171.1;transl_table=11
##sequence-region NZ_PYKC01000013.1 1 11880
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000013.1	RefSeq	region	1	11880	.	+	.	ID=NZ_PYKC01000013.1:1..11880;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000013.1	RefSeq	pseudogene	52	693	.	+	.	ID=gene-C9F00_RS02960;Name=C9F00_RS02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02960;old_locus_tag=C9F00_03015;partial=true;pseudo=true;start_range=.,52
NZ_PYKC01000013.1	Protein Homology	CDS	52	693	.	+	0	ID=cds-C9F00_RS02960;Parent=gene-C9F00_RS02960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F00_RS02960;partial=true;product=amino acid permease;pseudo=true;start_range=.,52;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	805	1467	.	-	.	ID=gene-C9F00_RS02965;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9F00_RS02965;old_locus_tag=C9F00_03020
NZ_PYKC01000013.1	Protein Homology	CDS	805	1467	.	-	0	ID=cds-WP_000331471.1;Parent=gene-C9F00_RS02965;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9F00_RS02965;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	1570	2535	.	-	.	ID=gene-C9F00_RS02970;Name=C9F00_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02970;old_locus_tag=C9F00_03025
NZ_PYKC01000013.1	Protein Homology	CDS	1570	2535	.	-	0	ID=cds-WP_135369330.1;Parent=gene-C9F00_RS02970;Dbxref=GenBank:WP_135369330.1;Name=WP_135369330.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9F00_RS02970;product=DMT family transporter;protein_id=WP_135369330.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	2616	3464	.	-	.	ID=gene-C9F00_RS02975;Name=C9F00_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02975;old_locus_tag=C9F00_03030
NZ_PYKC01000013.1	Protein Homology	CDS	2616	3464	.	-	0	ID=cds-WP_000560620.1;Parent=gene-C9F00_RS02975;Dbxref=GenBank:WP_000560620.1;Name=WP_000560620.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9F00_RS02975;product=SDR family oxidoreductase;protein_id=WP_000560620.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	3552	3938	.	+	.	ID=gene-C9F00_RS02980;Name=C9F00_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02980;old_locus_tag=C9F00_03035
NZ_PYKC01000013.1	Protein Homology	CDS	3552	3938	.	+	0	ID=cds-WP_001201297.1;Parent=gene-C9F00_RS02980;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9F00_RS02980;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	3996	5939	.	-	.	ID=gene-C9F00_RS02985;Name=C9F00_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02985;old_locus_tag=C9F00_03040
NZ_PYKC01000013.1	Protein Homology	CDS	3996	5939	.	-	0	ID=cds-WP_135369331.1;Parent=gene-C9F00_RS02985;Dbxref=GenBank:WP_135369331.1;Name=WP_135369331.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9F00_RS02985;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_135369331.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	6207	6947	.	+	.	ID=gene-C9F00_RS02995;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9F00_RS02995;old_locus_tag=C9F00_03050
NZ_PYKC01000013.1	Protein Homology	CDS	6207	6947	.	+	0	ID=cds-WP_000893398.1;Parent=gene-C9F00_RS02995;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9F00_RS02995;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	6937	7494	.	-	.	ID=gene-C9F00_RS03000;Name=C9F00_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03000;old_locus_tag=C9F00_03055
NZ_PYKC01000013.1	Protein Homology	CDS	6937	7494	.	-	0	ID=cds-WP_000175301.1;Parent=gene-C9F00_RS03000;Dbxref=GenBank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9F00_RS03000;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	7821	8027	.	+	.	ID=gene-C9F00_RS03010;Name=C9F00_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03010;old_locus_tag=C9F00_03065
NZ_PYKC01000013.1	Protein Homology	CDS	7821	8027	.	+	0	ID=cds-WP_000689229.1;Parent=gene-C9F00_RS03010;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9F00_RS03010;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	8112	9455	.	-	.	ID=gene-C9F00_RS03015;Name=C9F00_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03015;old_locus_tag=C9F00_03070
NZ_PYKC01000013.1	Protein Homology	CDS	8112	9455	.	-	0	ID=cds-WP_000934972.1;Parent=gene-C9F00_RS03015;Dbxref=GenBank:WP_000934972.1;Name=WP_000934972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9F00_RS03015;product=hemolysin family protein;protein_id=WP_000934972.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	gene	9638	10276	.	-	.	ID=gene-C9F00_RS03020;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9F00_RS03020;old_locus_tag=C9F00_03075
NZ_PYKC01000013.1	Protein Homology	CDS	9638	10276	.	-	0	ID=cds-WP_000051467.1;Parent=gene-C9F00_RS03020;Dbxref=GenBank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9F00_RS03020;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11
NZ_PYKC01000013.1	RefSeq	pseudogene	10489	11880	.	+	.	ID=gene-C9F00_RS03025;Name=C9F00_RS03025;end_range=11880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS03025;old_locus_tag=C9F00_03080;partial=true;pseudo=true
NZ_PYKC01000013.1	Protein Homology	CDS	10489	11880	.	+	0	ID=cds-C9F00_RS03025;Parent=gene-C9F00_RS03025;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0009306,GO:0097347;end_range=11880,.;gbkey=CDS;go_component=TAM protein secretion complex|0097347||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9F00_RS03025;partial=true;product=autotransporter assembly complex protein TamA;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000041.1 1 11285
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000041.1	RefSeq	region	1	11285	.	+	.	ID=NZ_PYKC01000041.1:1..11285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000041.1	RefSeq	gene	1	607	.	+	.	ID=gene-C9F00_RS06575;Name=C9F00_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06575;old_locus_tag=C9F00_06700;partial=true;start_range=.,1
NZ_PYKC01000041.1	Protein Homology	CDS	1	607	.	+	1	ID=cds-WP_135492213.1;Parent=gene-C9F00_RS06575;Dbxref=GenBank:WP_135492213.1;Name=WP_135492213.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9F00_RS06575;partial=true;product=DmsC/YnfH family molybdoenzyme membrane anchor subunit;protein_id=WP_135492213.1;start_range=.,1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	683	1276	.	+	.	ID=gene-C9F00_RS06580;Name=C9F00_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06580;old_locus_tag=C9F00_06705
NZ_PYKC01000041.1	Protein Homology	CDS	683	1276	.	+	0	ID=cds-WP_001519164.1;Parent=gene-C9F00_RS06580;Dbxref=GenBank:WP_001519164.1;Name=WP_001519164.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=C9F00_RS06580;product=TorD/DmsD family molecular chaperone;protein_id=WP_001519164.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	1360	2760	.	-	.	ID=gene-C9F00_RS06585;Name=C9F00_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06585;old_locus_tag=C9F00_06710
NZ_PYKC01000041.1	Protein Homology	CDS	1360	2760	.	-	0	ID=cds-WP_135369340.1;Parent=gene-C9F00_RS06585;Dbxref=GenBank:WP_135369340.1;Name=WP_135369340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9F00_RS06585;product=DUF7594 domain-containing protein;protein_id=WP_135369340.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	3064	3969	.	+	.	ID=gene-C9F00_RS06590;Name=C9F00_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06590;old_locus_tag=C9F00_06715
NZ_PYKC01000041.1	Protein Homology	CDS	3064	3969	.	+	0	ID=cds-WP_001268195.1;Parent=gene-C9F00_RS06590;Dbxref=GenBank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9F00_RS06590;product=SdiA-regulated domain-containing protein;protein_id=WP_001268195.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	4263	4397	.	-	.	ID=gene-C9F00_RS24355;Name=C9F00_RS24355;end_range=4397,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24355;partial=true;pseudo=true
NZ_PYKC01000041.1	Protein Homology	CDS	4263	4397	.	-	0	ID=cds-C9F00_RS24355;Parent=gene-C9F00_RS24355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4397,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9F00_RS24355;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	4505	4604	.	-	.	ID=gene-C9F00_RS24360;Name=C9F00_RS24360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24360;partial=true;pseudo=true;start_range=.,4505
NZ_PYKC01000041.1	Protein Homology	CDS	4505	4604	.	-	0	ID=cds-C9F00_RS24360;Parent=gene-C9F00_RS24360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=C9F00_RS24360;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4505;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	4624	4806	.	+	.	ID=gene-C9F00_RS24365;Name=C9F00_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24365;old_locus_tag=C9F00_06725
NZ_PYKC01000041.1	Protein Homology	CDS	4624	4806	.	+	0	ID=cds-WP_001527266.1;Parent=gene-C9F00_RS24365;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=C9F00_RS24365;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	4799	5086	.	-	.	ID=gene-C9F00_RS06605;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9F00_RS06605;old_locus_tag=C9F00_06730
NZ_PYKC01000041.1	Protein Homology	CDS	4799	5086	.	-	0	ID=cds-WP_001269916.1;Parent=gene-C9F00_RS06605;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9F00_RS06605;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	5083	5958	.	-	.	ID=gene-C9F00_RS06610;Name=C9F00_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06610;old_locus_tag=C9F00_06735
NZ_PYKC01000041.1	Protein Homology	CDS	5083	5958	.	-	0	ID=cds-WP_000921674.1;Parent=gene-C9F00_RS06610;Dbxref=GenBank:WP_000921674.1;Name=WP_000921674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9F00_RS06610;product=AraC family transcriptional regulator;protein_id=WP_000921674.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	6223	6445	.	-	.	ID=gene-C9F00_RS24370;Name=C9F00_RS24370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24370;old_locus_tag=C9F00_06740;pseudo=true
NZ_PYKC01000041.1	Protein Homology	CDS	6223	6445	.	-	0	ID=cds-C9F00_RS24370;Parent=gene-C9F00_RS24370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9F00_RS24370;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	6762	7055	.	+	.	ID=gene-C9F00_RS06620;Name=C9F00_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06620;old_locus_tag=C9F00_06745
NZ_PYKC01000041.1	Protein Homology	CDS	6762	7055	.	+	0	ID=cds-WP_001110450.1;Parent=gene-C9F00_RS06620;Dbxref=GenBank:WP_001110450.1;Name=WP_001110450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9F00_RS06620;product=DUF1778 domain-containing protein;protein_id=WP_001110450.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	7052	7543	.	+	.	ID=gene-C9F00_RS06625;Name=C9F00_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06625;old_locus_tag=C9F00_06750
NZ_PYKC01000041.1	Protein Homology	CDS	7052	7543	.	+	0	ID=cds-WP_000625912.1;Parent=gene-C9F00_RS06625;Dbxref=GenBank:WP_000625912.1;Name=WP_000625912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9F00_RS06625;product=GNAT family N-acetyltransferase;protein_id=WP_000625912.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	7758	8006	.	+	.	ID=gene-C9F00_RS06630;Name=C9F00_RS06630;end_range=8006,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06630;old_locus_tag=C9F00_06755;partial=true;pseudo=true;start_range=.,7758
NZ_PYKC01000041.1	Protein Homology	CDS	7758	8006	.	+	0	ID=cds-C9F00_RS06630;Parent=gene-C9F00_RS06630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8006,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=C9F00_RS06630;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,7758;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	8287	8633	.	-	.	ID=gene-C9F00_RS06635;Name=C9F00_RS06635;end_range=8633,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06635;old_locus_tag=C9F00_06760;partial=true;pseudo=true;start_range=.,8287
NZ_PYKC01000041.1	Protein Homology	CDS	8287	8633	.	-	0	ID=cds-C9F00_RS06635;Parent=gene-C9F00_RS06635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=C9F00_RS06635;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,8287;transl_table=11
NZ_PYKC01000041.1	RefSeq	pseudogene	8650	8793	.	-	.	ID=gene-C9F00_RS06640;Name=C9F00_RS06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06640;old_locus_tag=C9F00_06765;partial=true;pseudo=true;start_range=.,8650
NZ_PYKC01000041.1	Protein Homology	CDS	8650	8793	.	-	0	ID=cds-C9F00_RS06640;Parent=gene-C9F00_RS06640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1;locus_tag=C9F00_RS06640;partial=true;product=transposase;pseudo=true;start_range=.,8650;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	9326	9631	.	+	.	ID=gene-C9F00_RS06645;Name=C9F00_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06645;old_locus_tag=C9F00_06770
NZ_PYKC01000041.1	Protein Homology	CDS	9326	9631	.	+	0	ID=cds-WP_000370555.1;Parent=gene-C9F00_RS06645;Dbxref=GenBank:WP_000370555.1;Name=WP_000370555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370555.1;locus_tag=C9F00_RS06645;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_000370555.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	9833	10663	.	+	.	ID=gene-C9F00_RS06650;Name=C9F00_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06650;old_locus_tag=C9F00_06775
NZ_PYKC01000041.1	Protein Homology	CDS	9833	10663	.	+	0	ID=cds-WP_023231671.1;Parent=gene-C9F00_RS06650;Dbxref=GenBank:WP_023231671.1;Name=WP_023231671.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673851.1;locus_tag=C9F00_RS06650;product=fimbria/pilus periplasmic chaperone;protein_id=WP_023231671.1;transl_table=11
NZ_PYKC01000041.1	RefSeq	gene	10787	11230	.	+	.	ID=gene-C9F00_RS06655;Name=C9F00_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06655;old_locus_tag=C9F00_06780
NZ_PYKC01000041.1	Protein Homology	CDS	10787	11230	.	+	0	ID=cds-WP_245306381.1;Parent=gene-C9F00_RS06655;Dbxref=GenBank:WP_245306381.1;Name=WP_245306381.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF025320.6;locus_tag=C9F00_RS06655;product=FimD/PapC N-terminal domain-containing protein;protein_id=WP_245306381.1;transl_table=11
##sequence-region NZ_PYKC01000070.1 1 11249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000070.1	RefSeq	region	1	11249	.	+	.	ID=NZ_PYKC01000070.1:1..11249;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000070.1	RefSeq	pseudogene	1	368	.	+	.	ID=gene-C9F00_RS12270;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=pseudogene;locus_tag=C9F00_RS12270;old_locus_tag=C9F00_12575;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000070.1	Protein Homology	CDS	1	368	.	+	2	ID=cds-C9F00_RS12270;Parent=gene-C9F00_RS12270;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9F00_RS12270;partial=true;product=signal peptidase I;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	642	1322	.	+	.	ID=gene-C9F00_RS12275;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9F00_RS12275;old_locus_tag=C9F00_12585
NZ_PYKC01000070.1	Protein Homology	CDS	642	1322	.	+	0	ID=cds-WP_001068341.1;Parent=gene-C9F00_RS12275;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9F00_RS12275;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	1319	2224	.	+	.	ID=gene-C9F00_RS12280;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9F00_RS12280;old_locus_tag=C9F00_12590
NZ_PYKC01000070.1	Protein Homology	CDS	1319	2224	.	+	0	ID=cds-WP_000102230.1;Parent=gene-C9F00_RS12280;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9F00_RS12280;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	2236	2964	.	+	.	ID=gene-C9F00_RS12285;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9F00_RS12285;old_locus_tag=C9F00_12595
NZ_PYKC01000070.1	Protein Homology	CDS	2236	2964	.	+	0	ID=cds-WP_000399380.1;Parent=gene-C9F00_RS12285;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9F00_RS12285;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	2976	3707	.	+	.	ID=gene-C9F00_RS12290;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12290;old_locus_tag=C9F00_12600
NZ_PYKC01000070.1	Protein Homology	CDS	2976	3707	.	+	0	ID=cds-WP_000818969.1;Parent=gene-C9F00_RS12290;Dbxref=GenBank:WP_000818969.1;Name=WP_000818969.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9F00_RS12290;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818969.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	3707	4087	.	+	.	ID=gene-C9F00_RS12295;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9F00_RS12295;old_locus_tag=C9F00_12605
NZ_PYKC01000070.1	Protein Homology	CDS	3707	4087	.	+	0	ID=cds-WP_000986042.1;Parent=gene-C9F00_RS12295;Dbxref=GenBank:WP_000986042.1;Name=WP_000986042.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9F00_RS12295;product=holo-ACP synthase;protein_id=WP_000986042.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	4199	4459	.	-	.	ID=gene-C9F00_RS12300;Name=C9F00_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12300;old_locus_tag=C9F00_12610
NZ_PYKC01000070.1	Protein Homology	CDS	4199	4459	.	-	0	ID=cds-WP_001196290.1;Parent=gene-C9F00_RS12300;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9F00_RS12300;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	4497	5423	.	-	.	ID=gene-C9F00_RS12305;Name=C9F00_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12305;old_locus_tag=C9F00_12615
NZ_PYKC01000070.1	Protein Homology	CDS	4497	5423	.	-	0	ID=cds-WP_001022463.1;Parent=gene-C9F00_RS12305;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9F00_RS12305;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	5539	6735	.	+	.	ID=gene-C9F00_RS12310;Name=C9F00_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12310;old_locus_tag=C9F00_12620
NZ_PYKC01000070.1	Protein Homology	CDS	5539	6735	.	+	0	ID=cds-WP_001276364.1;Parent=gene-C9F00_RS12310;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9F00_RS12310;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	6757	7674	.	+	.	ID=gene-C9F00_RS12315;Name=C9F00_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12315;old_locus_tag=C9F00_12625
NZ_PYKC01000070.1	Protein Homology	CDS	6757	7674	.	+	0	ID=cds-WP_000684022.1;Parent=gene-C9F00_RS12315;Dbxref=GenBank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9F00_RS12315;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	7713	8561	.	-	.	ID=gene-C9F00_RS12320;Name=C9F00_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12320;old_locus_tag=C9F00_12630
NZ_PYKC01000070.1	Protein Homology	CDS	7713	8561	.	-	0	ID=cds-WP_000995703.1;Parent=gene-C9F00_RS12320;Dbxref=GenBank:WP_000995703.1;Name=WP_000995703.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9F00_RS12320;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995703.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	8677	9570	.	+	.	ID=gene-C9F00_RS12325;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9F00_RS12325;old_locus_tag=C9F00_12635
NZ_PYKC01000070.1	Protein Homology	CDS	8677	9570	.	+	0	ID=cds-WP_061582385.1;Parent=gene-C9F00_RS12325;Dbxref=GenBank:WP_061582385.1;Name=WP_061582385.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9F00_RS12325;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_061582385.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	9581	10942	.	+	.	ID=gene-C9F00_RS12330;Name=C9F00_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12330;old_locus_tag=C9F00_12640
NZ_PYKC01000070.1	Protein Homology	CDS	9581	10942	.	+	0	ID=cds-WP_000361660.1;Parent=gene-C9F00_RS12330;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9F00_RS12330;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11
NZ_PYKC01000070.1	RefSeq	gene	10946	11249	.	+	.	ID=gene-C9F00_RS12335;Name=C9F00_RS12335;end_range=11249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12335;old_locus_tag=C9F00_12645;partial=true
NZ_PYKC01000070.1	Protein Homology	CDS	10946	11249	.	+	0	ID=cds-WP_348628821.1;Parent=gene-C9F00_RS12335;Dbxref=GenBank:WP_348628821.1;Name=WP_348628821.1;end_range=11249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9F00_RS12335;partial=true;product=haloacid dehalogenase-like hydrolase;protein_id=WP_348628821.1;transl_table=11
##sequence-region NZ_PYKC01000084.1 1 10482
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000084.1	RefSeq	region	1	10482	.	+	.	ID=NZ_PYKC01000084.1:1..10482;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000084.1	RefSeq	gene	1	769	.	-	.	ID=gene-C9F00_RS13860;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9F00_RS13860;old_locus_tag=C9F00_14190;partial=true;start_range=.,1
NZ_PYKC01000084.1	Protein Homology	CDS	1	769	.	-	0	ID=cds-WP_135492348.1;Parent=gene-C9F00_RS13860;Dbxref=GenBank:WP_135492348.1;Name=WP_135492348.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9F00_RS13860;partial=true;product=pyrroline-5-carboxylate reductase;protein_id=WP_135492348.1;start_range=.,1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	909	1364	.	+	.	ID=gene-C9F00_RS13865;Name=C9F00_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13865;old_locus_tag=C9F00_14195
NZ_PYKC01000084.1	Protein Homology	CDS	909	1364	.	+	0	ID=cds-WP_000158137.1;Parent=gene-C9F00_RS13865;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9F00_RS13865;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	1549	2094	.	+	.	ID=gene-C9F00_RS13870;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9F00_RS13870;old_locus_tag=C9F00_14200
NZ_PYKC01000084.1	Protein Homology	CDS	1549	2094	.	+	0	ID=cds-WP_000983569.1;Parent=gene-C9F00_RS13870;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9F00_RS13870;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	2121	2312	.	+	.	ID=gene-C9F00_RS13875;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9F00_RS13875;old_locus_tag=C9F00_14205
NZ_PYKC01000084.1	Protein Homology	CDS	2121	2312	.	+	0	ID=cds-WP_001143161.1;Parent=gene-C9F00_RS13875;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9F00_RS13875;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	2563	3240	.	+	.	ID=gene-C9F00_RS13880;Name=C9F00_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13880;old_locus_tag=C9F00_14210
NZ_PYKC01000084.1	Protein Homology	CDS	2563	3240	.	+	0	ID=cds-WP_001276437.1;Parent=gene-C9F00_RS13880;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9F00_RS13880;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	3311	3595	.	+	.	ID=gene-C9F00_RS13885;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9F00_RS13885;old_locus_tag=C9F00_14215
NZ_PYKC01000084.1	Protein Homology	CDS	3311	3595	.	+	0	ID=cds-WP_000941953.1;Parent=gene-C9F00_RS13885;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9F00_RS13885;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	3633	4544	.	-	.	ID=gene-C9F00_RS13890;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9F00_RS13890;old_locus_tag=C9F00_14220
NZ_PYKC01000084.1	Protein Homology	CDS	3633	4544	.	-	0	ID=cds-WP_000964305.1;Parent=gene-C9F00_RS13890;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9F00_RS13890;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	4670	5578	.	+	.	ID=gene-C9F00_RS13895;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=C9F00_RS13895;old_locus_tag=C9F00_14225
NZ_PYKC01000084.1	Protein Homology	CDS	4670	5578	.	+	0	ID=cds-WP_001219277.1;Parent=gene-C9F00_RS13895;Dbxref=GenBank:WP_001219277.1;Name=WP_001219277.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9F00_RS13895;product=fructokinase;protein_id=WP_001219277.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	5598	6770	.	-	.	ID=gene-C9F00_RS13900;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=C9F00_RS13900;old_locus_tag=C9F00_14230
NZ_PYKC01000084.1	Protein Homology	CDS	5598	6770	.	-	0	ID=cds-WP_135369268.1;Parent=gene-C9F00_RS13900;Dbxref=GenBank:WP_135369268.1;Name=WP_135369268.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9F00_RS13900;product=MFS transporter AraJ;protein_id=WP_135369268.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	6942	10082	.	-	.	ID=gene-C9F00_RS13905;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9F00_RS13905;old_locus_tag=C9F00_14235
NZ_PYKC01000084.1	Protein Homology	CDS	6942	10082	.	-	0	ID=cds-WP_135369267.1;Parent=gene-C9F00_RS13905;Dbxref=GenBank:WP_135369267.1;Name=WP_135369267.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F00_RS13905;product=exonuclease subunit SbcC;protein_id=WP_135369267.1;transl_table=11
NZ_PYKC01000084.1	RefSeq	gene	10079	10482	.	-	.	ID=gene-C9F00_RS13910;Name=C9F00_RS13910;end_range=10482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13910;old_locus_tag=C9F00_14240;partial=true
NZ_PYKC01000084.1	Protein Homology	CDS	10079	10482	.	-	2	ID=cds-WP_210114162.1;Parent=gene-C9F00_RS13910;Dbxref=GenBank:WP_210114162.1;Name=WP_210114162.1;end_range=10482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F00_RS13910;partial=true;product=exonuclease SbcCD subunit D C-terminal domain-containing protein;protein_id=WP_210114162.1;transl_table=11
##sequence-region NZ_PYKC01000124.1 1 10214
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000124.1	RefSeq	region	1	10214	.	+	.	ID=NZ_PYKC01000124.1:1..10214;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000124.1	RefSeq	gene	490	1533	.	+	.	ID=gene-C9F00_RS18730;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9F00_RS18730;old_locus_tag=C9F00_19180
NZ_PYKC01000124.1	Protein Homology	CDS	490	1533	.	+	0	ID=cds-WP_135369336.1;Parent=gene-C9F00_RS18730;Dbxref=GenBank:WP_135369336.1;Name=WP_135369336.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F00_RS18730;product=quinolinate synthase NadA;protein_id=WP_135369336.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	1558	2277	.	+	.	ID=gene-C9F00_RS18735;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9F00_RS18735;old_locus_tag=C9F00_19185
NZ_PYKC01000124.1	Protein Homology	CDS	1558	2277	.	+	0	ID=cds-WP_000345361.1;Parent=gene-C9F00_RS18735;Dbxref=GenBank:WP_000345361.1;Name=WP_000345361.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9F00_RS18735;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345361.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	2274	3212	.	-	.	ID=gene-C9F00_RS18740;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9F00_RS18740;old_locus_tag=C9F00_19190
NZ_PYKC01000124.1	Protein Homology	CDS	2274	3212	.	-	0	ID=cds-WP_000951250.1;Parent=gene-C9F00_RS18740;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9F00_RS18740;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	3323	3709	.	-	.	ID=gene-C9F00_RS18745;Name=C9F00_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18745;old_locus_tag=C9F00_19195
NZ_PYKC01000124.1	Protein Homology	CDS	3323	3709	.	-	0	ID=cds-WP_080193232.1;Parent=gene-C9F00_RS18745;Dbxref=GenBank:WP_080193232.1;Name=WP_080193232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9F00_RS18745;product=YbgS-like family protein;protein_id=WP_080193232.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	4029	5081	.	+	.	ID=gene-C9F00_RS18750;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=C9F00_RS18750;old_locus_tag=C9F00_19200
NZ_PYKC01000124.1	Protein Homology	CDS	4029	5081	.	+	0	ID=cds-WP_001109233.1;Parent=gene-C9F00_RS18750;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9F00_RS18750;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	5175	5720	.	-	.	ID=gene-C9F00_RS18755;Name=C9F00_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18755;old_locus_tag=C9F00_19205
NZ_PYKC01000124.1	Protein Homology	CDS	5175	5720	.	-	0	ID=cds-WP_000970374.1;Parent=gene-C9F00_RS18755;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9F00_RS18755;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	5735	6580	.	-	.	ID=gene-C9F00_RS18760;Name=C9F00_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18760;old_locus_tag=C9F00_19210
NZ_PYKC01000124.1	Protein Homology	CDS	5735	6580	.	-	0	ID=cds-WP_000086831.1;Parent=gene-C9F00_RS18760;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9F00_RS18760;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	6710	7600	.	+	.	ID=gene-C9F00_RS18765;Name=C9F00_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18765;old_locus_tag=C9F00_19215
NZ_PYKC01000124.1	Protein Homology	CDS	6710	7600	.	+	0	ID=cds-WP_000405927.1;Parent=gene-C9F00_RS18765;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9F00_RS18765;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	7601	8584	.	-	.	ID=gene-C9F00_RS18770;Name=C9F00_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18770;old_locus_tag=C9F00_19220
NZ_PYKC01000124.1	Protein Homology	CDS	7601	8584	.	-	0	ID=cds-WP_000282119.1;Parent=gene-C9F00_RS18770;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9F00_RS18770;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	gene	8807	10075	.	+	.	ID=gene-C9F00_RS18775;Name=C9F00_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18775;old_locus_tag=C9F00_19225
NZ_PYKC01000124.1	Protein Homology	CDS	8807	10075	.	+	0	ID=cds-WP_023193244.1;Parent=gene-C9F00_RS18775;Dbxref=GenBank:WP_023193244.1;Name=WP_023193244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9F00_RS18775;product=SLC13 family permease;protein_id=WP_023193244.1;transl_table=11
NZ_PYKC01000124.1	RefSeq	pseudogene	10125	10214	.	+	.	ID=gene-C9F00_RS18780;Name=C9F00_RS18780;end_range=10214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18780;old_locus_tag=C9F00_19230;partial=true;pseudo=true
NZ_PYKC01000124.1	Protein Homology	CDS	10125	10214	.	+	0	ID=cds-C9F00_RS18780;Parent=gene-C9F00_RS18780;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9F00_RS18780;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000104.1 1 10152
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000104.1	RefSeq	region	1	10152	.	+	.	ID=NZ_PYKC01000104.1:1..10152;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000104.1	RefSeq	gene	1	9762	.	-	.	ID=gene-C9F00_RS17065;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9F00_RS17065;old_locus_tag=C9F00_17490;partial=true;start_range=.,1
NZ_PYKC01000104.1	Protein Homology	CDS	1	9762	.	-	0	ID=cds-WP_135492408.1;Parent=gene-C9F00_RS17065;Dbxref=GenBank:WP_135492408.1;Name=WP_135492408.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9F00_RS17065;partial=true;product=biofilm-associated protein BapA;protein_id=WP_135492408.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000096.1 1 82723
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000096.1	RefSeq	region	1	82723	.	+	.	ID=NZ_PYKC01000096.1:1..82723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000096.1	RefSeq	gene	1	1164	.	-	.	ID=gene-C9F00_RS24485;Name=C9F00_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24485;partial=true;start_range=.,1
NZ_PYKC01000096.1	Protein Homology	CDS	1	1164	.	-	0	ID=cds-WP_245306393.1;Parent=gene-C9F00_RS24485;Dbxref=GenBank:WP_245306393.1;Name=WP_245306393.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9F00_RS24485;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_245306393.1;start_range=.,1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	1345	2298	.	-	.	ID=gene-C9F00_RS15450;Name=C9F00_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15450;old_locus_tag=C9F00_15815
NZ_PYKC01000096.1	Protein Homology	CDS	1345	2298	.	-	0	ID=cds-WP_000749994.1;Parent=gene-C9F00_RS15450;Dbxref=GenBank:WP_000749994.1;Name=WP_000749994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9F00_RS15450;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749994.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	2777	4018	.	+	.	ID=gene-C9F00_RS15455;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9F00_RS15455;old_locus_tag=C9F00_15820
NZ_PYKC01000096.1	Protein Homology	CDS	2777	4018	.	+	0	ID=cds-WP_080185044.1;Parent=gene-C9F00_RS15455;Dbxref=GenBank:WP_080185044.1;Name=WP_080185044.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9F00_RS15455;product=multidrug efflux MFS transporter MdtM;protein_id=WP_080185044.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	4105	5376	.	+	.	ID=gene-C9F00_RS15460;Name=C9F00_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15460;old_locus_tag=C9F00_15825
NZ_PYKC01000096.1	Protein Homology	CDS	4105	5376	.	+	0	ID=cds-WP_001033033.1;Parent=gene-C9F00_RS15460;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9F00_RS15460;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	5596	6780	.	+	.	ID=gene-C9F00_RS15465;Name=C9F00_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15465;old_locus_tag=C9F00_15830
NZ_PYKC01000096.1	Protein Homology	CDS	5596	6780	.	+	0	ID=cds-WP_135369732.1;Parent=gene-C9F00_RS15465;Dbxref=GenBank:WP_135369732.1;Name=WP_135369732.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9F00_RS15465;product=MFS transporter;protein_id=WP_135369732.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	7652	8323	.	+	.	ID=gene-C9F00_RS15470;Name=C9F00_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15470;old_locus_tag=C9F00_15835
NZ_PYKC01000096.1	Protein Homology	CDS	7652	8323	.	+	0	ID=cds-WP_000068752.1;Parent=gene-C9F00_RS15470;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=C9F00_RS15470;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	8320	8781	.	+	.	ID=gene-C9F00_RS15475;Name=C9F00_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15475;old_locus_tag=C9F00_15840
NZ_PYKC01000096.1	Protein Homology	CDS	8320	8781	.	+	0	ID=cds-WP_000211979.1;Parent=gene-C9F00_RS15475;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9F00_RS15475;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	8794	9966	.	+	.	ID=gene-C9F00_RS15480;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9F00_RS15480;old_locus_tag=C9F00_15845
NZ_PYKC01000096.1	Protein Homology	CDS	8794	9966	.	+	0	ID=cds-WP_001113051.1;Parent=gene-C9F00_RS15480;Dbxref=GenBank:WP_001113051.1;Name=WP_001113051.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9F00_RS15480;product=beta-aspartyl-peptidase;protein_id=WP_001113051.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	10085	10993	.	+	.	ID=gene-C9F00_RS15485;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9F00_RS15485;old_locus_tag=C9F00_15850
NZ_PYKC01000096.1	Protein Homology	CDS	10085	10993	.	+	0	ID=cds-WP_000383509.1;Parent=gene-C9F00_RS15485;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9F00_RS15485;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	10999	11733	.	-	.	ID=gene-C9F00_RS15490;Name=C9F00_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15490;old_locus_tag=C9F00_15855
NZ_PYKC01000096.1	Protein Homology	CDS	10999	11733	.	-	0	ID=cds-WP_000683251.1;Parent=gene-C9F00_RS15490;Dbxref=GenBank:WP_000683251.1;Name=WP_000683251.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9F00_RS15490;product=aspartate/glutamate racemase family protein;protein_id=WP_000683251.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	11972	12502	.	-	.	ID=gene-C9F00_RS15495;Name=C9F00_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15495;old_locus_tag=C9F00_15865
NZ_PYKC01000096.1	Protein Homology	CDS	11972	12502	.	-	0	ID=cds-WP_000907671.1;Parent=gene-C9F00_RS15495;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9F00_RS15495;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	13220	14233	.	+	.	ID=gene-C9F00_RS15500;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F00_RS15500;old_locus_tag=C9F00_15870
NZ_PYKC01000096.1	Protein Homology	CDS	13220	14233	.	+	0	ID=cds-WP_135369137.1;Parent=gene-C9F00_RS15500;Dbxref=GenBank:WP_135369137.1;Name=WP_135369137.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9F00_RS15500;product=tryptophan--tRNA ligase;protein_id=WP_135369137.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	14234	15007	.	-	.	ID=gene-C9F00_RS15505;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9F00_RS15505;old_locus_tag=C9F00_15875
NZ_PYKC01000096.1	Protein Homology	CDS	14234	15007	.	-	0	ID=cds-WP_000841654.1;Parent=gene-C9F00_RS15505;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9F00_RS15505;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	15357	16031	.	+	.	ID=gene-C9F00_RS15510;Name=C9F00_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15510;old_locus_tag=C9F00_15885
NZ_PYKC01000096.1	Protein Homology	CDS	15357	16031	.	+	0	ID=cds-WP_135369136.1;Parent=gene-C9F00_RS15510;Dbxref=GenBank:WP_135369136.1;Name=WP_135369136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9F00_RS15510;product=dienelactone hydrolase family protein;protein_id=WP_135369136.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	16028	16489	.	-	.	ID=gene-C9F00_RS15515;Name=C9F00_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15515;old_locus_tag=C9F00_15890
NZ_PYKC01000096.1	Protein Homology	CDS	16028	16489	.	-	0	ID=cds-WP_001654330.1;Parent=gene-C9F00_RS15515;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9F00_RS15515;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	16694	17605	.	-	.	ID=gene-C9F00_RS15520;Name=C9F00_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15520;old_locus_tag=C9F00_15895
NZ_PYKC01000096.1	Protein Homology	CDS	16694	17605	.	-	0	ID=cds-WP_000556778.1;Parent=gene-C9F00_RS15520;Dbxref=GenBank:WP_000556778.1;Name=WP_000556778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9F00_RS15520;product=STM4504/CBY_0614 family protein;protein_id=WP_000556778.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	17881	18876	.	-	.	ID=gene-C9F00_RS15525;Name=C9F00_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15525;old_locus_tag=C9F00_15900
NZ_PYKC01000096.1	Protein Homology	CDS	17881	18876	.	-	0	ID=cds-WP_001240360.1;Parent=gene-C9F00_RS15525;Dbxref=GenBank:WP_001240360.1;Name=WP_001240360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=C9F00_RS15525;product=membrane protein;protein_id=WP_001240360.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	19128	19736	.	-	.	ID=gene-C9F00_RS15530;Name=C9F00_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15530;old_locus_tag=C9F00_15905
NZ_PYKC01000096.1	Protein Homology	CDS	19128	19736	.	-	0	ID=cds-WP_000864865.1;Parent=gene-C9F00_RS15530;Dbxref=GenBank:WP_000864865.1;Name=WP_000864865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9F00_RS15530;product=DUF1062 domain-containing protein;protein_id=WP_000864865.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	20225	20482	.	+	.	ID=gene-C9F00_RS15540;Name=C9F00_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15540;old_locus_tag=C9F00_15920
NZ_PYKC01000096.1	Protein Homology	CDS	20225	20482	.	+	0	ID=cds-WP_001054380.1;Parent=gene-C9F00_RS15540;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9F00_RS15540;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	20487	22118	.	+	.	ID=gene-C9F00_RS15545;Name=C9F00_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15545;old_locus_tag=C9F00_15925
NZ_PYKC01000096.1	Protein Homology	CDS	20487	22118	.	+	0	ID=cds-WP_135369135.1;Parent=gene-C9F00_RS15545;Dbxref=GenBank:WP_135369135.1;Name=WP_135369135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F00_RS15545;product=class I SAM-dependent methyltransferase;protein_id=WP_135369135.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	22678	23394	.	+	.	ID=gene-C9F00_RS15555;Name=C9F00_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15555;old_locus_tag=C9F00_15935
NZ_PYKC01000096.1	Protein Homology	CDS	22678	23394	.	+	0	ID=cds-WP_000532939.1;Parent=gene-C9F00_RS15555;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=C9F00_RS15555;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	23871	24746	.	-	.	ID=gene-C9F00_RS15560;Name=C9F00_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15560;old_locus_tag=C9F00_15940
NZ_PYKC01000096.1	Protein Homology	CDS	23871	24746	.	-	0	ID=cds-WP_000199884.1;Parent=gene-C9F00_RS15560;Dbxref=GenBank:WP_000199884.1;Name=WP_000199884.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=C9F00_RS15560;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000199884.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	25099	25521	.	-	.	ID=gene-C9F00_RS15565;Name=C9F00_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15565;old_locus_tag=C9F00_15945
NZ_PYKC01000096.1	Protein Homology	CDS	25099	25521	.	-	0	ID=cds-WP_058653118.1;Parent=gene-C9F00_RS15565;Dbxref=GenBank:WP_058653118.1;Name=WP_058653118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=C9F00_RS15565;product=fosfomycin resistance glutathione transferase FosA7.7;protein_id=WP_058653118.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	25645	25812	.	+	.	ID=gene-C9F00_RS24110;Name=C9F00_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24110
NZ_PYKC01000096.1	GeneMarkS-2+	CDS	25645	25812	.	+	0	ID=cds-WP_162798837.1;Parent=gene-C9F00_RS24110;Dbxref=GenBank:WP_162798837.1;Name=WP_162798837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24110;product=hypothetical protein;protein_id=WP_162798837.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	25954	28071	.	-	.	ID=gene-C9F00_RS15570;Name=C9F00_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15570;old_locus_tag=C9F00_15950
NZ_PYKC01000096.1	Protein Homology	CDS	25954	28071	.	-	0	ID=cds-WP_058653117.1;Parent=gene-C9F00_RS15570;Dbxref=GenBank:WP_058653117.1;Name=WP_058653117.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=C9F00_RS15570;product=ATP-dependent helicase;protein_id=WP_058653117.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	28068	34409	.	-	.	ID=gene-C9F00_RS15575;Name=C9F00_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15575;old_locus_tag=C9F00_15955
NZ_PYKC01000096.1	Protein Homology	CDS	28068	34409	.	-	0	ID=cds-WP_135369494.1;Parent=gene-C9F00_RS15575;Dbxref=GenBank:WP_135369494.1;Name=WP_135369494.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=C9F00_RS15575;product=DEAD/DEAH box helicase;protein_id=WP_135369494.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	34409	39349	.	-	.	ID=gene-C9F00_RS15580;Name=C9F00_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15580;old_locus_tag=C9F00_15960
NZ_PYKC01000096.1	Protein Homology	CDS	34409	39349	.	-	0	ID=cds-WP_135369495.1;Parent=gene-C9F00_RS15580;Dbxref=GenBank:WP_135369495.1;Name=WP_135369495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229651.1;locus_tag=C9F00_RS15580;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_135369495.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	39352	42210	.	-	.	ID=gene-C9F00_RS15585;Name=C9F00_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15585;old_locus_tag=C9F00_15965
NZ_PYKC01000096.1	Protein Homology	CDS	39352	42210	.	-	0	ID=cds-WP_135492377.1;Parent=gene-C9F00_RS15585;Dbxref=GenBank:WP_135492377.1;Name=WP_135492377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=C9F00_RS15585;product=DEAD/DEAH box helicase;protein_id=WP_135492377.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	42828	43607	.	-	.	ID=gene-C9F00_RS15590;Name=C9F00_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15590;old_locus_tag=C9F00_15970
NZ_PYKC01000096.1	Protein Homology	CDS	42828	43607	.	-	0	ID=cds-WP_058653113.1;Parent=gene-C9F00_RS15590;Dbxref=GenBank:WP_058653113.1;Name=WP_058653113.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=C9F00_RS15590;product=HNH endonuclease;protein_id=WP_058653113.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	43768	44082	.	+	.	ID=gene-C9F00_RS15595;Name=C9F00_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15595;old_locus_tag=C9F00_15975
NZ_PYKC01000096.1	Protein Homology	CDS	43768	44082	.	+	0	ID=cds-WP_058653112.1;Parent=gene-C9F00_RS15595;Dbxref=GenBank:WP_058653112.1;Name=WP_058653112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=C9F00_RS15595;product=hypothetical protein;protein_id=WP_058653112.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	pseudogene	44079	44365	.	-	.	ID=gene-C9F00_RS15600;Name=C9F00_RS15600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15600;old_locus_tag=C9F00_15980;pseudo=true
NZ_PYKC01000096.1	Protein Homology	CDS	44079	44365	.	-	0	ID=cds-C9F00_RS15600;Parent=gene-C9F00_RS15600;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9F00_RS15600;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	44584	44668	.	-	.	ID=gene-C9F00_RS15605;Name=C9F00_RS15605;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS15605;old_locus_tag=C9F00_15985
NZ_PYKC01000096.1	tRNAscan-SE	tRNA	44584	44668	.	-	.	ID=rna-C9F00_RS15605;Parent=gene-C9F00_RS15605;anticodon=(pos:complement(44632..44634));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15605;product=tRNA-Leu
NZ_PYKC01000096.1	tRNAscan-SE	exon	44584	44668	.	-	.	ID=exon-C9F00_RS15605-1;Parent=rna-C9F00_RS15605;anticodon=(pos:complement(44632..44634));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15605;product=tRNA-Leu
NZ_PYKC01000096.1	RefSeq	gene	44891	45910	.	+	.	ID=gene-C9F00_RS15610;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=C9F00_RS15610;old_locus_tag=C9F00_15990
NZ_PYKC01000096.1	Protein Homology	CDS	44891	45910	.	+	0	ID=cds-WP_000152563.1;Parent=gene-C9F00_RS15610;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9F00_RS15610;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	45938	46468	.	-	.	ID=gene-C9F00_RS15615;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9F00_RS15615;old_locus_tag=C9F00_15995
NZ_PYKC01000096.1	Protein Homology	CDS	45938	46468	.	-	0	ID=cds-WP_000896756.1;Parent=gene-C9F00_RS15615;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9F00_RS15615;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	46685	47716	.	+	.	ID=gene-C9F00_RS15620;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9F00_RS15620;old_locus_tag=C9F00_16000
NZ_PYKC01000096.1	Protein Homology	CDS	46685	47716	.	+	0	ID=cds-WP_000453351.1;Parent=gene-C9F00_RS15620;Dbxref=GenBank:WP_000453351.1;Name=WP_000453351.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9F00_RS15620;product=L-idonate 5-dehydrogenase;protein_id=WP_000453351.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	47741	48505	.	+	.	ID=gene-C9F00_RS15625;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9F00_RS15625;old_locus_tag=C9F00_16005
NZ_PYKC01000096.1	Protein Homology	CDS	47741	48505	.	+	0	ID=cds-WP_000998688.1;Parent=gene-C9F00_RS15625;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9F00_RS15625;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	48567	49886	.	+	.	ID=gene-C9F00_RS15630;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9F00_RS15630;old_locus_tag=C9F00_16010
NZ_PYKC01000096.1	Protein Homology	CDS	48567	49886	.	+	0	ID=cds-WP_001128352.1;Parent=gene-C9F00_RS15630;Dbxref=GenBank:WP_001128352.1;Name=WP_001128352.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F00_RS15630;product=gnt-II system L-idonate transporter;protein_id=WP_001128352.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	49950	50948	.	+	.	ID=gene-C9F00_RS15635;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=C9F00_RS15635;old_locus_tag=C9F00_16015
NZ_PYKC01000096.1	Protein Homology	CDS	49950	50948	.	+	0	ID=cds-WP_001244065.1;Parent=gene-C9F00_RS15635;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9F00_RS15635;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	51166	52248	.	-	.	ID=gene-C9F00_RS15640;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9F00_RS15640;old_locus_tag=C9F00_16020
NZ_PYKC01000096.1	Protein Homology	CDS	51166	52248	.	-	0	ID=cds-WP_135492379.1;Parent=gene-C9F00_RS15640;Dbxref=GenBank:WP_135492379.1;Name=WP_135492379.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9F00_RS15640;product=LPS export ABC transporter permease LptG;protein_id=WP_135492379.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	52248	53348	.	-	.	ID=gene-C9F00_RS15645;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9F00_RS15645;old_locus_tag=C9F00_16025
NZ_PYKC01000096.1	Protein Homology	CDS	52248	53348	.	-	0	ID=cds-WP_000584132.1;Parent=gene-C9F00_RS15645;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9F00_RS15645;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	53412	53462	.	-	.	ID=gene-C9F00_RS24490;Name=C9F00_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24490
NZ_PYKC01000096.1	Protein Homology	CDS	53412	53462	.	-	0	ID=cds-WP_212724070.1;Parent=gene-C9F00_RS24490;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9F00_RS24490;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	53743	55254	.	+	.	ID=gene-C9F00_RS15655;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9F00_RS15655;old_locus_tag=C9F00_16040
NZ_PYKC01000096.1	Protein Homology	CDS	53743	55254	.	+	0	ID=cds-WP_000397158.1;Parent=gene-C9F00_RS15655;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9F00_RS15655;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	55391	55834	.	+	.	ID=gene-C9F00_RS15660;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9F00_RS15660;old_locus_tag=C9F00_16045
NZ_PYKC01000096.1	Protein Homology	CDS	55391	55834	.	+	0	ID=cds-WP_001523689.1;Parent=gene-C9F00_RS15660;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9F00_RS15660;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	55834	58689	.	+	.	ID=gene-C9F00_RS15665;Name=C9F00_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15665;old_locus_tag=C9F00_16050
NZ_PYKC01000096.1	Protein Homology	CDS	55834	58689	.	+	0	ID=cds-WP_135369496.1;Parent=gene-C9F00_RS15665;Dbxref=GenBank:WP_135369496.1;Name=WP_135369496.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F00_RS15665;product=valine--tRNA ligase;protein_id=WP_135369496.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	58831	60018	.	-	.	ID=gene-C9F00_RS15670;Name=C9F00_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15670;old_locus_tag=C9F00_16055
NZ_PYKC01000096.1	Protein Homology	CDS	58831	60018	.	-	0	ID=cds-WP_001066975.1;Parent=gene-C9F00_RS15670;Dbxref=GenBank:WP_001066975.1;Name=WP_001066975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9F00_RS15670;product=YjgN family protein;protein_id=WP_001066975.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	60213	60716	.	+	.	ID=gene-C9F00_RS15675;Name=C9F00_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15675;old_locus_tag=C9F00_16060
NZ_PYKC01000096.1	Protein Homology	CDS	60213	60716	.	+	0	ID=cds-WP_001519079.1;Parent=gene-C9F00_RS15675;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9F00_RS15675;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	60823	61311	.	+	.	ID=gene-C9F00_RS15680;Name=C9F00_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15680;old_locus_tag=C9F00_16065
NZ_PYKC01000096.1	Protein Homology	CDS	60823	61311	.	+	0	ID=cds-WP_000826193.1;Parent=gene-C9F00_RS15680;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9F00_RS15680;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	61545	62357	.	-	.	ID=gene-C9F00_RS15685;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9F00_RS15685;old_locus_tag=C9F00_16070
NZ_PYKC01000096.1	Protein Homology	CDS	61545	62357	.	-	0	ID=cds-WP_000218459.1;Parent=gene-C9F00_RS15685;Dbxref=GenBank:WP_000218459.1;Name=WP_000218459.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9F00_RS15685;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218459.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	62369	62785	.	-	.	ID=gene-C9F00_RS15690;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9F00_RS15690;old_locus_tag=C9F00_16075
NZ_PYKC01000096.1	Protein Homology	CDS	62369	62785	.	-	0	ID=cds-WP_000002940.1;Parent=gene-C9F00_RS15690;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9F00_RS15690;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	62951	63955	.	+	.	ID=gene-C9F00_RS15695;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F00_RS15695;old_locus_tag=C9F00_16080
NZ_PYKC01000096.1	Protein Homology	CDS	62951	63955	.	+	0	ID=cds-WP_135492381.1;Parent=gene-C9F00_RS15695;Dbxref=GenBank:WP_135492381.1;Name=WP_135492381.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9F00_RS15695;product=ornithine carbamoyltransferase;protein_id=WP_135492381.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	64029	64481	.	-	.	ID=gene-C9F00_RS15700;Name=C9F00_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15700;old_locus_tag=C9F00_16085
NZ_PYKC01000096.1	Protein Homology	CDS	64029	64481	.	-	0	ID=cds-WP_000583455.1;Parent=gene-C9F00_RS15700;Dbxref=GenBank:WP_000583455.1;Name=WP_000583455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9F00_RS15700;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583455.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	65157	66377	.	+	.	ID=gene-C9F00_RS15710;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9F00_RS15710;old_locus_tag=C9F00_16100
NZ_PYKC01000096.1	Protein Homology	CDS	65157	66377	.	+	0	ID=cds-WP_000410846.1;Parent=gene-C9F00_RS15710;Dbxref=GenBank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9F00_RS15710;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	66388	67320	.	+	.	ID=gene-C9F00_RS15715;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9F00_RS15715;old_locus_tag=C9F00_16105
NZ_PYKC01000096.1	Protein Homology	CDS	66388	67320	.	+	0	ID=cds-WP_000428751.1;Parent=gene-C9F00_RS15715;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F00_RS15715;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	67432	68436	.	+	.	ID=gene-C9F00_RS15720;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F00_RS15720;old_locus_tag=C9F00_16110
NZ_PYKC01000096.1	Protein Homology	CDS	67432	68436	.	+	0	ID=cds-WP_000237031.1;Parent=gene-C9F00_RS15720;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9F00_RS15720;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	68492	69895	.	+	.	ID=gene-C9F00_RS15725;Name=C9F00_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15725;old_locus_tag=C9F00_16115
NZ_PYKC01000096.1	Protein Homology	CDS	68492	69895	.	+	0	ID=cds-WP_000514424.1;Parent=gene-C9F00_RS15725;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9F00_RS15725;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	70082	70570	.	+	.	ID=gene-C9F00_RS15730;Name=C9F00_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15730;old_locus_tag=C9F00_16120
NZ_PYKC01000096.1	Protein Homology	CDS	70082	70570	.	+	0	ID=cds-WP_000666051.1;Parent=gene-C9F00_RS15730;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9F00_RS15730;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	70540	70680	.	-	.	ID=gene-C9F00_RS15735;Name=C9F00_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15735;old_locus_tag=C9F00_16125
NZ_PYKC01000096.1	Protein Homology	CDS	70540	70680	.	-	0	ID=cds-WP_001541415.1;Parent=gene-C9F00_RS15735;Dbxref=GenBank:WP_001541415.1;Name=WP_001541415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9F00_RS15735;product=hypothetical protein;protein_id=WP_001541415.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	70660	70761	.	+	.	ID=gene-C9F00_RS15740;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=C9F00_RS15740;old_locus_tag=C9F00_16130
NZ_PYKC01000096.1	Protein Homology	CDS	70660	70761	.	+	0	ID=cds-WP_000249504.1;Parent=gene-C9F00_RS15740;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9F00_RS15740;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	70797	71732	.	+	.	ID=gene-C9F00_RS15745;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9F00_RS15745;old_locus_tag=C9F00_16135
NZ_PYKC01000096.1	Protein Homology	CDS	70797	71732	.	+	0	ID=cds-WP_000013055.1;Parent=gene-C9F00_RS15745;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9F00_RS15745;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	71745	72206	.	+	.	ID=gene-C9F00_RS15750;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9F00_RS15750;old_locus_tag=C9F00_16140
NZ_PYKC01000096.1	Protein Homology	CDS	71745	72206	.	+	0	ID=cds-WP_000148570.1;Parent=gene-C9F00_RS15750;Dbxref=GenBank:WP_000148570.1;Name=WP_000148570.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9F00_RS15750;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148570.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	72283	72669	.	+	.	ID=gene-C9F00_RS15755;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9F00_RS15755;old_locus_tag=C9F00_16145
NZ_PYKC01000096.1	Protein Homology	CDS	72283	72669	.	+	0	ID=cds-WP_000047544.1;Parent=gene-C9F00_RS15755;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9F00_RS15755;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	72758	75466	.	-	.	ID=gene-C9F00_RS15760;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F00_RS15760;old_locus_tag=C9F00_16150
NZ_PYKC01000096.1	Protein Homology	CDS	72758	75466	.	-	0	ID=cds-WP_135369781.1;Parent=gene-C9F00_RS15760;Dbxref=GenBank:WP_135369781.1;Name=WP_135369781.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F00_RS15760;product=magnesium-translocating P-type ATPase;protein_id=WP_135369781.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	75607	75705	.	-	.	ID=gene-C9F00_RS24850;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=C9F00_RS24850
NZ_PYKC01000096.1	Protein Homology	CDS	75607	75705	.	-	0	ID=cds-WP_105789234.1;Parent=gene-C9F00_RS24850;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=C9F00_RS24850;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	75850	76797	.	+	.	ID=gene-C9F00_RS15770;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9F00_RS15770;old_locus_tag=C9F00_16155
NZ_PYKC01000096.1	Protein Homology	CDS	75850	76797	.	+	0	ID=cds-WP_001181297.1;Parent=gene-C9F00_RS15770;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9F00_RS15770;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	76935	78353	.	+	.	ID=gene-C9F00_RS15775;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9F00_RS15775;old_locus_tag=C9F00_16160
NZ_PYKC01000096.1	Protein Homology	CDS	76935	78353	.	+	0	ID=cds-WP_000048817.1;Parent=gene-C9F00_RS15775;Dbxref=GenBank:WP_000048817.1;Name=WP_000048817.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9F00_RS15775;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048817.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	78403	80055	.	+	.	ID=gene-C9F00_RS15780;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9F00_RS15780;old_locus_tag=C9F00_16165
NZ_PYKC01000096.1	Protein Homology	CDS	78403	80055	.	+	0	ID=cds-WP_135369780.1;Parent=gene-C9F00_RS15780;Dbxref=GenBank:WP_135369780.1;Name=WP_135369780.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9F00_RS15780;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_135369780.1;transl_table=11
NZ_PYKC01000096.1	RefSeq	gene	80464	82602	.	+	.	ID=gene-C9F00_RS15785;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9F00_RS15785;old_locus_tag=C9F00_16170
NZ_PYKC01000096.1	Protein Homology	CDS	80464	82602	.	+	0	ID=cds-WP_000187818.1;Parent=gene-C9F00_RS15785;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9F00_RS15785;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11
##sequence-region NZ_PYKC01000135.1 1 10071
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000135.1	RefSeq	region	1	10071	.	+	.	ID=NZ_PYKC01000135.1:1..10071;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000135.1	RefSeq	gene	71	1084	.	-	.	ID=gene-C9F00_RS20415;Name=C9F00_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20415;old_locus_tag=C9F00_20885
NZ_PYKC01000135.1	Protein Homology	CDS	71	1084	.	-	0	ID=cds-WP_001289138.1;Parent=gene-C9F00_RS20415;Dbxref=GenBank:WP_001289138.1;Name=WP_001289138.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9F00_RS20415;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289138.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	1152	2288	.	-	.	ID=gene-C9F00_RS20420;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9F00_RS20420;old_locus_tag=C9F00_20890
NZ_PYKC01000135.1	Protein Homology	CDS	1152	2288	.	-	0	ID=cds-WP_000699176.1;Parent=gene-C9F00_RS20420;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9F00_RS20420;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	2392	3393	.	+	.	ID=gene-C9F00_RS20425;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9F00_RS20425;old_locus_tag=C9F00_20895
NZ_PYKC01000135.1	Protein Homology	CDS	2392	3393	.	+	0	ID=cds-WP_000553395.1;Parent=gene-C9F00_RS20425;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9F00_RS20425;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	3390	4568	.	-	.	ID=gene-C9F00_RS20430;Name=C9F00_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20430;old_locus_tag=C9F00_20900
NZ_PYKC01000135.1	Protein Homology	CDS	3390	4568	.	-	0	ID=cds-WP_135492476.1;Parent=gene-C9F00_RS20430;Dbxref=GenBank:WP_135492476.1;Name=WP_135492476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9F00_RS20430;product=MFS transporter;protein_id=WP_135492476.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	4747	5121	.	-	.	ID=gene-C9F00_RS20435;Name=C9F00_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20435;old_locus_tag=C9F00_20905
NZ_PYKC01000135.1	Protein Homology	CDS	4747	5121	.	-	0	ID=cds-WP_001051266.1;Parent=gene-C9F00_RS20435;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9F00_RS20435;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	5294	5542	.	+	.	ID=gene-C9F00_RS20440;Name=C9F00_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20440;old_locus_tag=C9F00_20910
NZ_PYKC01000135.1	Protein Homology	CDS	5294	5542	.	+	0	ID=cds-WP_000433426.1;Parent=gene-C9F00_RS20440;Dbxref=GenBank:WP_000433426.1;Name=WP_000433426.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9F00_RS20440;product=helix-turn-helix domain-containing protein;protein_id=WP_000433426.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	5711	6079	.	+	.	ID=gene-C9F00_RS20445;Name=C9F00_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20445;old_locus_tag=C9F00_20915
NZ_PYKC01000135.1	Protein Homology	CDS	5711	6079	.	+	0	ID=cds-WP_000118257.1;Parent=gene-C9F00_RS20445;Dbxref=GenBank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9F00_RS20445;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	6079	6597	.	+	.	ID=gene-C9F00_RS20450;Name=C9F00_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20450;old_locus_tag=C9F00_20920
NZ_PYKC01000135.1	Protein Homology	CDS	6079	6597	.	+	0	ID=cds-WP_000847542.1;Parent=gene-C9F00_RS20450;Dbxref=GenBank:WP_000847542.1;Name=WP_000847542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9F00_RS20450;product=YbjP/YqhG family protein;protein_id=WP_000847542.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	6664	7320	.	-	.	ID=gene-C9F00_RS20455;Name=C9F00_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20455;old_locus_tag=C9F00_20925
NZ_PYKC01000135.1	Protein Homology	CDS	6664	7320	.	-	0	ID=cds-WP_001142900.1;Parent=gene-C9F00_RS20455;Dbxref=GenBank:WP_001142900.1;Name=WP_001142900.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9F00_RS20455;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142900.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	7418	8632	.	-	.	ID=gene-C9F00_RS20460;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9F00_RS20460;old_locus_tag=C9F00_20930
NZ_PYKC01000135.1	Protein Homology	CDS	7418	8632	.	-	0	ID=cds-WP_000817159.1;Parent=gene-C9F00_RS20460;Dbxref=GenBank:WP_000817159.1;Name=WP_000817159.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9F00_RS20460;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817159.1;transl_table=11
NZ_PYKC01000135.1	RefSeq	gene	8792	10071	.	+	.	ID=gene-C9F00_RS20465;Name=mnmC;end_range=10071,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9F00_RS20465;old_locus_tag=C9F00_20935;partial=true
NZ_PYKC01000135.1	Protein Homology	CDS	8792	10071	.	+	0	ID=cds-WP_167850724.1;Parent=gene-C9F00_RS20465;Dbxref=GenBank:WP_167850724.1;Name=WP_167850724.1;Ontology_term=GO:0008033,GO:0004808,GO:0016645;end_range=10071,.;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240147.1;locus_tag=C9F00_RS20465;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_167850724.1;transl_table=11
##sequence-region NZ_PYKC01000063.1 1 9988
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000063.1	RefSeq	region	1	9988	.	+	.	ID=NZ_PYKC01000063.1:1..9988;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000063.1	RefSeq	pseudogene	1	103	.	+	.	ID=gene-C9F00_RS24430;Name=C9F00_RS24430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24430;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000063.1	Protein Homology	CDS	1	103	.	+	1	ID=cds-C9F00_RS24430;Parent=gene-C9F00_RS24430;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308504.1;locus_tag=C9F00_RS24430;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	147	944	.	-	.	ID=gene-C9F00_RS11255;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9F00_RS11255;old_locus_tag=C9F00_11525
NZ_PYKC01000063.1	Protein Homology	CDS	147	944	.	-	0	ID=cds-WP_000909791.1;Parent=gene-C9F00_RS11255;Dbxref=GenBank:WP_000909791.1;Name=WP_000909791.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F00_RS11255;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909791.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	947	1807	.	-	.	ID=gene-C9F00_RS11260;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9F00_RS11260;old_locus_tag=C9F00_11530
NZ_PYKC01000063.1	Protein Homology	CDS	947	1807	.	-	0	ID=cds-WP_079987328.1;Parent=gene-C9F00_RS11260;Dbxref=GenBank:WP_079987328.1;Name=WP_079987328.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F00_RS11260;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_079987328.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	1810	2919	.	-	.	ID=gene-C9F00_RS11265;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9F00_RS11265;old_locus_tag=C9F00_11535
NZ_PYKC01000063.1	Protein Homology	CDS	1810	2919	.	-	0	ID=cds-WP_001527281.1;Parent=gene-C9F00_RS11265;Dbxref=GenBank:WP_001527281.1;Name=WP_001527281.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9F00_RS11265;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_001527281.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	2925	3938	.	-	.	ID=gene-C9F00_RS11270;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9F00_RS11270;old_locus_tag=C9F00_11540
NZ_PYKC01000063.1	Protein Homology	CDS	2925	3938	.	-	0	ID=cds-WP_079987327.1;Parent=gene-C9F00_RS11270;Dbxref=GenBank:WP_079987327.1;Name=WP_079987327.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9F00_RS11270;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_079987327.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	4136	4855	.	-	.	ID=gene-C9F00_RS11275;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9F00_RS11275;old_locus_tag=C9F00_11545
NZ_PYKC01000063.1	Protein Homology	CDS	4136	4855	.	-	0	ID=cds-WP_000836268.1;Parent=gene-C9F00_RS11275;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9F00_RS11275;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	4995	6098	.	+	.	ID=gene-C9F00_RS11280;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9F00_RS11280;old_locus_tag=C9F00_11550
NZ_PYKC01000063.1	Protein Homology	CDS	4995	6098	.	+	0	ID=cds-WP_023182335.1;Parent=gene-C9F00_RS11280;Dbxref=GenBank:WP_023182335.1;Name=WP_023182335.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9F00_RS11280;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_023182335.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	6108	6917	.	+	.	ID=gene-C9F00_RS11285;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=C9F00_RS11285;old_locus_tag=C9F00_11555
NZ_PYKC01000063.1	Protein Homology	CDS	6108	6917	.	+	0	ID=cds-WP_135369271.1;Parent=gene-C9F00_RS11285;Dbxref=GenBank:WP_135369271.1;Name=WP_135369271.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9F00_RS11285;product=phosphonoacetaldehyde hydrolase;protein_id=WP_135369271.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	pseudogene	6923	7005	.	+	.	ID=gene-C9F00_RS24820;Name=C9F00_RS24820;end_range=7005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24820;partial=true;pseudo=true;start_range=.,6923
NZ_PYKC01000063.1	Protein Homology	CDS	6923	7005	.	+	0	ID=cds-C9F00_RS24820;Parent=gene-C9F00_RS24820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F00_RS24820;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6923;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	7014	7604	.	-	.	ID=gene-C9F00_RS11290;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9F00_RS11290;old_locus_tag=C9F00_11560
NZ_PYKC01000063.1	Protein Homology	CDS	7014	7604	.	-	0	ID=cds-WP_001275809.1;Parent=gene-C9F00_RS11290;Dbxref=GenBank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9F00_RS11290;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	7567	8478	.	-	.	ID=gene-C9F00_RS11295;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9F00_RS11295;old_locus_tag=C9F00_11565
NZ_PYKC01000063.1	Protein Homology	CDS	7567	8478	.	-	0	ID=cds-WP_000705816.1;Parent=gene-C9F00_RS11295;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9F00_RS11295;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	gene	8604	9095	.	+	.	ID=gene-C9F00_RS11300;Name=C9F00_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11300;old_locus_tag=C9F00_11570
NZ_PYKC01000063.1	Protein Homology	CDS	8604	9095	.	+	0	ID=cds-WP_001138913.1;Parent=gene-C9F00_RS11300;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F00_RS11300;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11
NZ_PYKC01000063.1	RefSeq	pseudogene	9142	9939	.	-	.	ID=gene-C9F00_RS11305;Name=C9F00_RS11305;end_range=9939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11305;old_locus_tag=C9F00_11575;partial=true;pseudo=true
NZ_PYKC01000063.1	Protein Homology	CDS	9142	9939	.	-	0	ID=cds-C9F00_RS11305;Parent=gene-C9F00_RS11305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=9939,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9F00_RS11305;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000110.1 1 9949
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000110.1	RefSeq	region	1	9949	.	+	.	ID=NZ_PYKC01000110.1:1..9949;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000110.1	RefSeq	gene	3	76	.	-	.	ID=gene-C9F00_RS17270;Name=C9F00_RS17270;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS17270;old_locus_tag=C9F00_17705
NZ_PYKC01000110.1	tRNAscan-SE	tRNA	3	76	.	-	.	ID=rna-C9F00_RS17270;Parent=gene-C9F00_RS17270;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17270;product=tRNA-Arg
NZ_PYKC01000110.1	tRNAscan-SE	exon	3	76	.	-	.	ID=exon-C9F00_RS17270-1;Parent=rna-C9F00_RS17270;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17270;product=tRNA-Arg
NZ_PYKC01000110.1	RefSeq	gene	138	214	.	-	.	ID=gene-C9F00_RS17275;Name=C9F00_RS17275;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS17275;old_locus_tag=C9F00_17710
NZ_PYKC01000110.1	tRNAscan-SE	tRNA	138	214	.	-	.	ID=rna-C9F00_RS17275;Parent=gene-C9F00_RS17275;anticodon=(pos:complement(178..180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17275;product=tRNA-Arg
NZ_PYKC01000110.1	tRNAscan-SE	exon	138	214	.	-	.	ID=exon-C9F00_RS17275-1;Parent=rna-C9F00_RS17275;anticodon=(pos:complement(178..180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17275;product=tRNA-Arg
NZ_PYKC01000110.1	RefSeq	gene	218	310	.	-	.	ID=gene-C9F00_RS17280;Name=C9F00_RS17280;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS17280;old_locus_tag=C9F00_17715
NZ_PYKC01000110.1	tRNAscan-SE	tRNA	218	310	.	-	.	ID=rna-C9F00_RS17280;Parent=gene-C9F00_RS17280;anticodon=(pos:complement(274..276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17280;product=tRNA-Ser
NZ_PYKC01000110.1	tRNAscan-SE	exon	218	310	.	-	.	ID=exon-C9F00_RS17280-1;Parent=rna-C9F00_RS17280;anticodon=(pos:complement(274..276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17280;product=tRNA-Ser
NZ_PYKC01000110.1	RefSeq	gene	614	799	.	-	.	ID=gene-C9F00_RS17285;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9F00_RS17285;old_locus_tag=C9F00_17725
NZ_PYKC01000110.1	Protein Homology	CDS	614	799	.	-	0	ID=cds-WP_000906486.1;Parent=gene-C9F00_RS17285;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9F00_RS17285;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	1034	3664	.	-	.	ID=gene-C9F00_RS17290;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9F00_RS17290;old_locus_tag=C9F00_17730
NZ_PYKC01000110.1	Protein Homology	CDS	1034	3664	.	-	0	ID=cds-WP_061380580.1;Parent=gene-C9F00_RS17290;Dbxref=GenBank:WP_061380580.1;Name=WP_061380580.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9F00_RS17290;product=alanine--tRNA ligase;protein_id=WP_061380580.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	3900	4400	.	-	.	ID=gene-C9F00_RS17300;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9F00_RS17300;old_locus_tag=C9F00_17740
NZ_PYKC01000110.1	Protein Homology	CDS	3900	4400	.	-	0	ID=cds-WP_001294863.1;Parent=gene-C9F00_RS17300;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9F00_RS17300;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	4517	5578	.	-	.	ID=gene-C9F00_RS17305;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9F00_RS17305;old_locus_tag=C9F00_17745
NZ_PYKC01000110.1	Protein Homology	CDS	4517	5578	.	-	0	ID=cds-WP_000963150.1;Parent=gene-C9F00_RS17305;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9F00_RS17305;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	5663	6160	.	-	.	ID=gene-C9F00_RS17310;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9F00_RS17310;old_locus_tag=C9F00_17750
NZ_PYKC01000110.1	Protein Homology	CDS	5663	6160	.	-	0	ID=cds-WP_010835022.1;Parent=gene-C9F00_RS17310;Dbxref=GenBank:WP_010835022.1;Name=WP_010835022.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9F00_RS17310;product=nicotinamide-nucleotide amidase;protein_id=WP_010835022.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	6356	6601	.	+	.	ID=gene-C9F00_RS24520;Name=C9F00_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24520;old_locus_tag=C9F00_17755
NZ_PYKC01000110.1	Protein Homology	CDS	6356	6601	.	+	0	ID=cds-WP_021000688.1;Parent=gene-C9F00_RS24520;Dbxref=GenBank:WP_021000688.1;Name=WP_021000688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9F00_RS24520;product=hypothetical protein;protein_id=WP_021000688.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	6638	7717	.	-	.	ID=gene-C9F00_RS17320;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9F00_RS17320;old_locus_tag=C9F00_17760
NZ_PYKC01000110.1	Protein Homology	CDS	6638	7717	.	-	0	ID=cds-WP_000476828.1;Parent=gene-C9F00_RS17320;Dbxref=GenBank:WP_000476828.1;Name=WP_000476828.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9F00_RS17320;product=lytic murein transglycosylase B;protein_id=WP_000476828.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	7970	8533	.	+	.	ID=gene-C9F00_RS17325;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9F00_RS17325;old_locus_tag=C9F00_17765
NZ_PYKC01000110.1	Protein Homology	CDS	7970	8533	.	+	0	ID=cds-WP_000573335.1;Parent=gene-C9F00_RS17325;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9F00_RS17325;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	gene	8530	9501	.	+	.	ID=gene-C9F00_RS17330;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9F00_RS17330;old_locus_tag=C9F00_17770
NZ_PYKC01000110.1	Protein Homology	CDS	8530	9501	.	+	0	ID=cds-WP_000199039.1;Parent=gene-C9F00_RS17330;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9F00_RS17330;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11
NZ_PYKC01000110.1	RefSeq	pseudogene	9513	9797	.	+	.	ID=gene-C9F00_RS17335;Name=C9F00_RS17335;end_range=9797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17335;old_locus_tag=C9F00_17775;partial=true;pseudo=true
NZ_PYKC01000110.1	Protein Homology	CDS	9513	9797	.	+	0	ID=cds-C9F00_RS17335;Parent=gene-C9F00_RS17335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009401,GO:0008982,GO:0005737;end_range=9797,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311587.1;locus_tag=C9F00_RS17335;partial=true;product=PTS glucitol/sorbitol transporter subunit IIA;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000034.1 1 9825
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000034.1	RefSeq	region	1	9825	.	+	.	ID=NZ_PYKC01000034.1:1..9825;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000034.1	RefSeq	gene	1	552	.	-	.	ID=gene-C9F00_RS24345;Name=C9F00_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24345;partial=true;start_range=.,1
NZ_PYKC01000034.1	Protein Homology	CDS	1	552	.	-	0	ID=cds-WP_280954440.1;Parent=gene-C9F00_RS24345;Dbxref=GenBank:WP_280954440.1;Name=WP_280954440.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156,GO:0008984,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF013502.6;locus_tag=C9F00_RS24345;partial=true;product=chemotaxis protein CheB;protein_id=WP_280954440.1;start_range=.,1;transl_table=11
NZ_PYKC01000034.1	RefSeq	pseudogene	535	2388	.	-	.	ID=gene-C9F00_RS05740;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;locus_tag=C9F00_RS05740;old_locus_tag=C9F00_05840;partial=true;pseudo=true;start_range=.,535
NZ_PYKC01000034.1	Protein Homology	CDS	535	2388	.	-	0	ID=cds-C9F00_RS05740;Parent=gene-C9F00_RS05740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F00_RS05740;partial=true;product=propionate--CoA ligase;pseudo=true;start_range=.,535;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	2429	3880	.	-	.	ID=gene-C9F00_RS05745;Name=C9F00_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05745;old_locus_tag=C9F00_05845
NZ_PYKC01000034.1	Protein Homology	CDS	2429	3880	.	-	0	ID=cds-WP_080105456.1;Parent=gene-C9F00_RS05745;Dbxref=GenBank:WP_080105456.1;Name=WP_080105456.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9F00_RS05745;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_080105456.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	3918	5087	.	-	.	ID=gene-C9F00_RS05750;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=C9F00_RS05750;old_locus_tag=C9F00_05850
NZ_PYKC01000034.1	Protein Homology	CDS	3918	5087	.	-	0	ID=cds-WP_000132743.1;Parent=gene-C9F00_RS05750;Dbxref=GenBank:WP_000132743.1;Name=WP_000132743.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9F00_RS05750;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132743.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	5210	6097	.	-	.	ID=gene-C9F00_RS05755;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9F00_RS05755;old_locus_tag=C9F00_05855
NZ_PYKC01000034.1	Protein Homology	CDS	5210	6097	.	-	0	ID=cds-WP_000052229.1;Parent=gene-C9F00_RS05755;Dbxref=GenBank:WP_000052229.1;Name=WP_000052229.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=C9F00_RS05755;product=methylisocitrate lyase;protein_id=WP_000052229.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	6363	7988	.	+	.	ID=gene-C9F00_RS05760;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9F00_RS05760;old_locus_tag=C9F00_05860
NZ_PYKC01000034.1	Protein Homology	CDS	6363	7988	.	+	0	ID=cds-WP_135369140.1;Parent=gene-C9F00_RS05760;Dbxref=GenBank:WP_135369140.1;Name=WP_135369140.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9F00_RS05760;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_135369140.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	8124	8399	.	-	.	ID=gene-C9F00_RS05765;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9F00_RS05765;old_locus_tag=C9F00_05865
NZ_PYKC01000034.1	Protein Homology	CDS	8124	8399	.	-	0	ID=cds-WP_000848026.1;Parent=gene-C9F00_RS05765;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9F00_RS05765;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	8631	9263	.	+	.	ID=gene-C9F00_RS05770;Name=C9F00_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05770;old_locus_tag=C9F00_05870
NZ_PYKC01000034.1	Protein Homology	CDS	8631	9263	.	+	0	ID=cds-WP_000433131.1;Parent=gene-C9F00_RS05770;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9F00_RS05770;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11
NZ_PYKC01000034.1	RefSeq	gene	9304	9825	.	-	.	ID=gene-C9F00_RS05775;Name=C9F00_RS05775;end_range=9825,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05775;old_locus_tag=C9F00_05875;partial=true
NZ_PYKC01000034.1	Protein Homology	CDS	9304	9825	.	-	0	ID=cds-WP_135492194.1;Parent=gene-C9F00_RS05775;Dbxref=GenBank:WP_135492194.1;Name=WP_135492194.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;end_range=9825,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F00_RS05775;partial=true;product=TonB-dependent siderophore receptor;protein_id=WP_135492194.1;transl_table=11
##sequence-region NZ_PYKC01000053.1 1 9541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000053.1	RefSeq	region	1	9541	.	+	.	ID=NZ_PYKC01000053.1:1..9541;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000053.1	RefSeq	gene	186	1088	.	+	.	ID=gene-C9F00_RS08295;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=C9F00_RS08295;old_locus_tag=C9F00_08470
NZ_PYKC01000053.1	Protein Homology	CDS	186	1088	.	+	0	ID=cds-WP_050068253.1;Parent=gene-C9F00_RS08295;Dbxref=GenBank:WP_050068253.1;Name=WP_050068253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9F00_RS08295;product=DNA-binding transcriptional repressor CitR;protein_id=WP_050068253.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	1254	2489	.	+	.	ID=gene-C9F00_RS08300;Name=C9F00_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08300;old_locus_tag=C9F00_08475
NZ_PYKC01000053.1	Protein Homology	CDS	1254	2489	.	+	0	ID=cds-WP_080150858.1;Parent=gene-C9F00_RS08300;Dbxref=GenBank:WP_080150858.1;Name=WP_080150858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9F00_RS08300;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_080150858.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	2462	3079	.	+	.	ID=gene-C9F00_RS08305;Name=C9F00_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08305;old_locus_tag=C9F00_08480
NZ_PYKC01000053.1	Protein Homology	CDS	2462	3079	.	+	0	ID=cds-WP_001164756.1;Parent=gene-C9F00_RS08305;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9F00_RS08305;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	3080	4240	.	-	.	ID=gene-C9F00_RS08310;Name=C9F00_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08310;old_locus_tag=C9F00_08485
NZ_PYKC01000053.1	Protein Homology	CDS	3080	4240	.	-	0	ID=cds-WP_135369414.1;Parent=gene-C9F00_RS08310;Dbxref=GenBank:WP_135369414.1;Name=WP_135369414.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9F00_RS08310;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_135369414.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	4367	5455	.	+	.	ID=gene-C9F00_RS08315;Name=C9F00_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08315;old_locus_tag=C9F00_08490
NZ_PYKC01000053.1	Protein Homology	CDS	4367	5455	.	+	0	ID=cds-WP_001016849.1;Parent=gene-C9F00_RS08315;Dbxref=GenBank:WP_001016849.1;Name=WP_001016849.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9F00_RS08315;product=oxidoreductase;protein_id=WP_001016849.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	5491	5688	.	-	.	ID=gene-C9F00_RS08320;Name=C9F00_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08320;old_locus_tag=C9F00_08495
NZ_PYKC01000053.1	Protein Homology	CDS	5491	5688	.	-	0	ID=cds-WP_000460619.1;Parent=gene-C9F00_RS08320;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9F00_RS08320;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	5752	7857	.	-	.	ID=gene-C9F00_RS08325;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9F00_RS08325;old_locus_tag=C9F00_08500
NZ_PYKC01000053.1	Protein Homology	CDS	5752	7857	.	-	0	ID=cds-WP_001043108.1;Parent=gene-C9F00_RS08325;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9F00_RS08325;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	8039	8452	.	-	.	ID=gene-C9F00_RS08330;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9F00_RS08330;old_locus_tag=C9F00_08505
NZ_PYKC01000053.1	Protein Homology	CDS	8039	8452	.	-	0	ID=cds-WP_000637966.1;Parent=gene-C9F00_RS08330;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9F00_RS08330;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	8455	9210	.	-	.	ID=gene-C9F00_RS08335;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9F00_RS08335;old_locus_tag=C9F00_08510
NZ_PYKC01000053.1	Protein Homology	CDS	8455	9210	.	-	0	ID=cds-WP_135369413.1;Parent=gene-C9F00_RS08335;Dbxref=GenBank:WP_135369413.1;Name=WP_135369413.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9F00_RS08335;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_135369413.1;transl_table=11
NZ_PYKC01000053.1	RefSeq	gene	9210	9541	.	-	.	ID=gene-C9F00_RS08340;Name=C9F00_RS08340;end_range=9541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08340;old_locus_tag=C9F00_08515;partial=true
NZ_PYKC01000053.1	Protein Homology	CDS	9210	9541	.	-	2	ID=cds-WP_245306385.1;Parent=gene-C9F00_RS08340;Dbxref=GenBank:WP_245306385.1;Name=WP_245306385.1;end_range=9541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9F00_RS08340;partial=true;product=phosphopantetheine-binding protein;protein_id=WP_245306385.1;transl_table=11
##sequence-region NZ_PYKC01000143.1 1 8562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000143.1	RefSeq	region	1	8562	.	+	.	ID=NZ_PYKC01000143.1:1..8562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000143.1	RefSeq	pseudogene	1	624	.	-	.	ID=gene-C9F00_RS22000;Name=C9F00_RS22000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22000;old_locus_tag=C9F00_22520;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000143.1	Protein Homology	CDS	1	624	.	-	0	ID=cds-C9F00_RS22000;Parent=gene-C9F00_RS22000;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F00_RS22000;partial=true;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	704	1744	.	+	.	ID=gene-C9F00_RS22005;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9F00_RS22005;old_locus_tag=C9F00_22525
NZ_PYKC01000143.1	Protein Homology	CDS	704	1744	.	+	0	ID=cds-WP_045901455.1;Parent=gene-C9F00_RS22005;Dbxref=GenBank:WP_045901455.1;Name=WP_045901455.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9F00_RS22005;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_045901455.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	1717	2409	.	-	.	ID=gene-C9F00_RS22010;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9F00_RS22010;old_locus_tag=C9F00_22530
NZ_PYKC01000143.1	Protein Homology	CDS	1717	2409	.	-	0	ID=cds-WP_001562512.1;Parent=gene-C9F00_RS22010;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9F00_RS22010;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	2539	3723	.	+	.	ID=gene-C9F00_RS22015;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9F00_RS22015;old_locus_tag=C9F00_22535
NZ_PYKC01000143.1	Protein Homology	CDS	2539	3723	.	+	0	ID=cds-WP_001230255.1;Parent=gene-C9F00_RS22015;Dbxref=GenBank:WP_001230255.1;Name=WP_001230255.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9F00_RS22015;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230255.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	3713	6265	.	+	.	ID=gene-C9F00_RS22020;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=C9F00_RS22020;old_locus_tag=C9F00_22540
NZ_PYKC01000143.1	Protein Homology	CDS	3713	6265	.	+	0	ID=cds-WP_052938651.1;Parent=gene-C9F00_RS22020;Dbxref=GenBank:WP_052938651.1;Name=WP_052938651.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9F00_RS22020;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_052938651.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	6258	6890	.	+	.	ID=gene-C9F00_RS22025;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9F00_RS22025;old_locus_tag=C9F00_22545
NZ_PYKC01000143.1	Protein Homology	CDS	6258	6890	.	+	0	ID=cds-WP_000595416.1;Parent=gene-C9F00_RS22025;Dbxref=GenBank:WP_000595416.1;Name=WP_000595416.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9F00_RS22025;product=molecular chaperone TorD;protein_id=WP_000595416.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	gene	7080	8480	.	+	.	ID=gene-C9F00_RS22030;Name=C9F00_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22030;old_locus_tag=C9F00_22550
NZ_PYKC01000143.1	Protein Homology	CDS	7080	8480	.	+	0	ID=cds-WP_000724476.1;Parent=gene-C9F00_RS22030;Dbxref=GenBank:WP_000724476.1;Name=WP_000724476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9F00_RS22030;product=cytochrome-c peroxidase;protein_id=WP_000724476.1;transl_table=11
NZ_PYKC01000143.1	RefSeq	pseudogene	8486	8562	.	+	.	ID=gene-C9F00_RS22035;Name=C9F00_RS22035;end_range=8562,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22035;old_locus_tag=C9F00_22555;partial=true;pseudo=true
NZ_PYKC01000143.1	Protein Homology	CDS	8486	8562	.	+	0	ID=cds-C9F00_RS22035;Parent=gene-C9F00_RS22035;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F00_RS22035;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000148.1 1 8439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000148.1	RefSeq	region	1	8439	.	+	.	ID=NZ_PYKC01000148.1:1..8439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000148.1	RefSeq	pseudogene	1	273	.	-	.	ID=gene-C9F00_RS22255;Name=C9F00_RS22255;end_range=273,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22255;old_locus_tag=C9F00_22780;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000148.1	Protein Homology	CDS	1	273	.	-	0	ID=cds-C9F00_RS22255;Parent=gene-C9F00_RS22255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0031388,GO:0008887;end_range=273,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386937.1;locus_tag=C9F00_RS22255;partial=true;product=glycerate kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000148.1	RefSeq	pseudogene	217	2016	.	+	.	ID=gene-C9F00_RS22260;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=C9F00_RS22260;old_locus_tag=C9F00_22785;partial=true;pseudo=true;start_range=.,217
NZ_PYKC01000148.1	Protein Homology	CDS	217	2016	.	+	0	ID=cds-C9F00_RS22260;Parent=gene-C9F00_RS22260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F00_RS22260;partial=true;product=glycine--tRNA ligase subunit beta;pseudo=true;start_range=.,217;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	2067	2606	.	-	.	ID=gene-C9F00_RS22265;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9F00_RS22265;old_locus_tag=C9F00_22790
NZ_PYKC01000148.1	Protein Homology	CDS	2067	2606	.	-	0	ID=cds-WP_135369445.1;Parent=gene-C9F00_RS22265;Dbxref=GenBank:WP_135369445.1;Name=WP_135369445.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9F00_RS22265;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_135369445.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	2790	3002	.	-	.	ID=gene-C9F00_RS22270;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F00_RS22270;old_locus_tag=C9F00_22795
NZ_PYKC01000148.1	Protein Homology	CDS	2790	3002	.	-	0	ID=cds-WP_000014594.1;Parent=gene-C9F00_RS22270;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9F00_RS22270;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	3290	3580	.	-	.	ID=gene-C9F00_RS22275;Name=C9F00_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22275;old_locus_tag=C9F00_22800
NZ_PYKC01000148.1	Protein Homology	CDS	3290	3580	.	-	0	ID=cds-WP_000455790.1;Parent=gene-C9F00_RS22275;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9F00_RS22275;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	4019	4729	.	+	.	ID=gene-C9F00_RS22280;Name=C9F00_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22280;old_locus_tag=C9F00_22805
NZ_PYKC01000148.1	Protein Homology	CDS	4019	4729	.	+	0	ID=cds-WP_000190524.1;Parent=gene-C9F00_RS22280;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9F00_RS22280;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	4779	5753	.	-	.	ID=gene-C9F00_RS22285;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9F00_RS22285;old_locus_tag=C9F00_22810
NZ_PYKC01000148.1	Protein Homology	CDS	4779	5753	.	-	0	ID=cds-WP_135369446.1;Parent=gene-C9F00_RS22285;Dbxref=GenBank:WP_135369446.1;Name=WP_135369446.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9F00_RS22285;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_135369446.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	5972	6634	.	-	.	ID=gene-C9F00_RS22290;Name=C9F00_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22290;old_locus_tag=C9F00_22815
NZ_PYKC01000148.1	Protein Homology	CDS	5972	6634	.	-	0	ID=cds-WP_000747548.1;Parent=gene-C9F00_RS22290;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9F00_RS22290;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11
NZ_PYKC01000148.1	RefSeq	gene	6787	8439	.	+	.	ID=gene-C9F00_RS22295;Name=C9F00_RS22295;end_range=8439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22295;old_locus_tag=C9F00_22820;partial=true
NZ_PYKC01000148.1	Protein Homology	CDS	6787	8439	.	+	0	ID=cds-WP_135492532.1;Parent=gene-C9F00_RS22295;Dbxref=GenBank:WP_135492532.1;Name=WP_135492532.1;Ontology_term=GO:0016491;end_range=8439,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9F00_RS22295;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_135492532.1;transl_table=11
##sequence-region NZ_PYKC01000043.1 1 8239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000043.1	RefSeq	region	1	8239	.	+	.	ID=NZ_PYKC01000043.1:1..8239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000043.1	RefSeq	gene	1	1210	.	+	.	ID=gene-C9F00_RS06810;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9F00_RS06810;old_locus_tag=C9F00_06940;partial=true;start_range=.,1
NZ_PYKC01000043.1	Protein Homology	CDS	1	1210	.	+	1	ID=cds-WP_135492215.1;Parent=gene-C9F00_RS06810;Dbxref=GenBank:WP_135492215.1;Name=WP_135492215.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9F00_RS06810;partial=true;product=ribosome biogenesis GTPase Der;protein_id=WP_135492215.1;start_range=.,1;transl_table=11
NZ_PYKC01000043.1	RefSeq	gene	1299	1520	.	+	.	ID=gene-C9F00_RS06815;Name=C9F00_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06815;old_locus_tag=C9F00_06945
NZ_PYKC01000043.1	Protein Homology	CDS	1299	1520	.	+	0	ID=cds-WP_000406465.1;Parent=gene-C9F00_RS06815;Dbxref=GenBank:WP_000406465.1;Name=WP_000406465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9F00_RS06815;product=zinc ribbon domain-containing protein;protein_id=WP_000406465.1;transl_table=11
NZ_PYKC01000043.1	RefSeq	gene	1866	4058	.	+	.	ID=gene-C9F00_RS06820;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9F00_RS06820;old_locus_tag=C9F00_06950
NZ_PYKC01000043.1	Protein Homology	CDS	1866	4058	.	+	0	ID=cds-WP_135492217.1;Parent=gene-C9F00_RS06820;Dbxref=GenBank:WP_135492217.1;Name=WP_135492217.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F00_RS06820;product=intimin-like inverse autotransporter SinH;protein_id=WP_135492217.1;transl_table=11
NZ_PYKC01000043.1	RefSeq	gene	4116	5081	.	+	.	ID=gene-C9F00_RS06825;Name=C9F00_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06825;old_locus_tag=C9F00_06955
NZ_PYKC01000043.1	Protein Homology	CDS	4116	5081	.	+	0	ID=cds-WP_135369314.1;Parent=gene-C9F00_RS06825;Dbxref=GenBank:WP_135369314.1;Name=WP_135369314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9F00_RS06825;product=SinI family autotransporter-associated protein;protein_id=WP_135369314.1;transl_table=11
NZ_PYKC01000043.1	RefSeq	gene	5201	8239	.	+	.	ID=gene-C9F00_RS06830;Name=C9F00_RS06830;end_range=8239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06830;old_locus_tag=C9F00_06960;partial=true
NZ_PYKC01000043.1	Protein Homology	CDS	5201	8239	.	+	0	ID=cds-WP_245306382.1;Parent=gene-C9F00_RS06830;Dbxref=GenBank:WP_245306382.1;Name=WP_245306382.1;end_range=8239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9F00_RS06830;partial=true;product=adhesion domain-containing protein;protein_id=WP_245306382.1;transl_table=11
##sequence-region NZ_PYKC01000089.1 1 7749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000089.1	RefSeq	region	1	7749	.	+	.	ID=NZ_PYKC01000089.1:1..7749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000089.1	RefSeq	pseudogene	1	1235	.	+	.	ID=gene-C9F00_RS14575;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=pseudogene;locus_tag=C9F00_RS14575;old_locus_tag=C9F00_14915;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000089.1	Protein Homology	CDS	1	1235	.	+	2	ID=cds-C9F00_RS14575;Parent=gene-C9F00_RS14575;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829360.1;locus_tag=C9F00_RS14575;partial=true;product=tRNA cytosine(34) acetyltransferase TmcA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	1262	1462	.	-	.	ID=gene-C9F00_RS14580;Name=C9F00_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14580;old_locus_tag=C9F00_14920
NZ_PYKC01000089.1	Protein Homology	CDS	1262	1462	.	-	0	ID=cds-WP_000383839.1;Parent=gene-C9F00_RS14580;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9F00_RS14580;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	1490	2617	.	-	.	ID=gene-C9F00_RS14585;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9F00_RS14585;old_locus_tag=C9F00_14925
NZ_PYKC01000089.1	Protein Homology	CDS	1490	2617	.	-	0	ID=cds-WP_001277825.1;Parent=gene-C9F00_RS14585;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9F00_RS14585;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	2621	2977	.	-	.	ID=gene-C9F00_RS14590;Name=C9F00_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14590;old_locus_tag=C9F00_14930
NZ_PYKC01000089.1	Protein Homology	CDS	2621	2977	.	-	0	ID=cds-WP_000631923.1;Parent=gene-C9F00_RS14590;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9F00_RS14590;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	3390	3449	.	+	.	ID=gene-C9F00_RS14595;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9F00_RS14595;old_locus_tag=C9F00_14935
NZ_PYKC01000089.1	Protein Homology	CDS	3390	3449	.	+	0	ID=cds-WP_001386977.1;Parent=gene-C9F00_RS14595;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9F00_RS14595;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	3551	6664	.	-	.	ID=gene-C9F00_RS14600;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=C9F00_RS14600;old_locus_tag=C9F00_14940
NZ_PYKC01000089.1	Protein Homology	CDS	3551	6664	.	-	0	ID=cds-WP_135369677.1;Parent=gene-C9F00_RS14600;Dbxref=GenBank:WP_135369677.1;Name=WP_135369677.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F00_RS14600;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_135369677.1;transl_table=11
NZ_PYKC01000089.1	RefSeq	gene	6849	7749	.	-	.	ID=gene-C9F00_RS14605;Name=C9F00_RS14605;end_range=7749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14605;old_locus_tag=C9F00_14945;partial=true
NZ_PYKC01000089.1	Protein Homology	CDS	6849	7749	.	-	1	ID=cds-WP_245306391.1;Parent=gene-C9F00_RS14605;Dbxref=GenBank:WP_245306391.1;Name=WP_245306391.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;end_range=7749,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9F00_RS14605;partial=true;product=histidine kinase;protein_id=WP_245306391.1;transl_table=11
##sequence-region NZ_PYKC01000074.1 1 7736
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000074.1	RefSeq	region	1	7736	.	+	.	ID=NZ_PYKC01000074.1:1..7736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000074.1	RefSeq	gene	1	1297	.	+	.	ID=gene-C9F00_RS12645;Name=C9F00_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12645;old_locus_tag=C9F00_12960;partial=true;start_range=.,1
NZ_PYKC01000074.1	Protein Homology	CDS	1	1297	.	+	1	ID=cds-WP_135492315.1;Parent=gene-C9F00_RS12645;Dbxref=GenBank:WP_135492315.1;Name=WP_135492315.1;Ontology_term=GO:0006826,GO:0022857,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033733.1;locus_tag=C9F00_RS12645;partial=true;product=iron ABC transporter permease;protein_id=WP_135492315.1;start_range=.,1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	2238	2798	.	+	.	ID=gene-C9F00_RS12655;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=C9F00_RS12655;old_locus_tag=C9F00_12970
NZ_PYKC01000074.1	Protein Homology	CDS	2238	2798	.	+	0	ID=cds-WP_001090553.1;Parent=gene-C9F00_RS12655;Dbxref=GenBank:WP_001090553.1;Name=WP_001090553.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9F00_RS12655;product=fimbrial major subunit StfA;protein_id=WP_001090553.1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	2884	5541	.	+	.	ID=gene-C9F00_RS12660;Name=C9F00_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12660;old_locus_tag=C9F00_12975
NZ_PYKC01000074.1	Protein Homology	CDS	2884	5541	.	+	0	ID=cds-WP_135369497.1;Parent=gene-C9F00_RS12660;Dbxref=GenBank:WP_135369497.1;Name=WP_135369497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9F00_RS12660;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135369497.1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	5559	6311	.	+	.	ID=gene-C9F00_RS12665;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9F00_RS12665;old_locus_tag=C9F00_12980
NZ_PYKC01000074.1	Protein Homology	CDS	5559	6311	.	+	0	ID=cds-WP_135369498.1;Parent=gene-C9F00_RS12665;Dbxref=GenBank:WP_135369498.1;Name=WP_135369498.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9F00_RS12665;product=fimbrial chaperone StfD;protein_id=WP_135369498.1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	6330	6842	.	+	.	ID=gene-C9F00_RS12670;Name=C9F00_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12670;old_locus_tag=C9F00_12985
NZ_PYKC01000074.1	Protein Homology	CDS	6330	6842	.	+	0	ID=cds-WP_001250313.1;Parent=gene-C9F00_RS12670;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9F00_RS12670;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	6839	7315	.	+	.	ID=gene-C9F00_RS12675;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9F00_RS12675;old_locus_tag=C9F00_12990
NZ_PYKC01000074.1	Protein Homology	CDS	6839	7315	.	+	0	ID=cds-WP_000725074.1;Parent=gene-C9F00_RS12675;Dbxref=GenBank:WP_000725074.1;Name=WP_000725074.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9F00_RS12675;product=fimbrial minor subunit StfF;protein_id=WP_000725074.1;transl_table=11
NZ_PYKC01000074.1	RefSeq	gene	7315	7736	.	+	.	ID=gene-C9F00_RS12680;Name=C9F00_RS12680;end_range=7736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12680;old_locus_tag=C9F00_12995;partial=true
NZ_PYKC01000074.1	Protein Homology	CDS	7315	7736	.	+	0	ID=cds-WP_135492317.1;Parent=gene-C9F00_RS12680;Dbxref=GenBank:WP_135492317.1;Name=WP_135492317.1;Ontology_term=GO:0007155,GO:0009289;end_range=7736,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9F00_RS12680;partial=true;product=fimbrial protein;protein_id=WP_135492317.1;transl_table=11
##sequence-region NZ_PYKC01000061.1 1 80377
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000061.1	RefSeq	region	1	80377	.	+	.	ID=NZ_PYKC01000061.1:1..80377;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000061.1	RefSeq	gene	1	813	.	-	.	ID=gene-C9F00_RS10255;Name=C9F00_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10255;old_locus_tag=C9F00_10495;partial=true;start_range=.,1
NZ_PYKC01000061.1	Protein Homology	CDS	1	813	.	-	0	ID=cds-WP_167850717.1;Parent=gene-C9F00_RS10255;Dbxref=GenBank:WP_167850717.1;Name=WP_167850717.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F00_RS10255;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_167850717.1;start_range=.,1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	828	1718	.	-	.	ID=gene-C9F00_RS10260;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9F00_RS10260;old_locus_tag=C9F00_10500
NZ_PYKC01000061.1	Protein Homology	CDS	828	1718	.	-	0	ID=cds-WP_135369509.1;Parent=gene-C9F00_RS10260;Dbxref=GenBank:WP_135369509.1;Name=WP_135369509.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9F00_RS10260;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_135369509.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	1718	2515	.	-	.	ID=gene-C9F00_RS10265;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9F00_RS10265;old_locus_tag=C9F00_10505
NZ_PYKC01000061.1	Protein Homology	CDS	1718	2515	.	-	0	ID=cds-WP_001157197.1;Parent=gene-C9F00_RS10265;Dbxref=GenBank:WP_001157197.1;Name=WP_001157197.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9F00_RS10265;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157197.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	2564	4807	.	-	.	ID=gene-C9F00_RS10270;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9F00_RS10270;old_locus_tag=C9F00_10510
NZ_PYKC01000061.1	Protein Homology	CDS	2564	4807	.	-	0	ID=cds-WP_010835134.1;Parent=gene-C9F00_RS10270;Dbxref=GenBank:WP_010835134.1;Name=WP_010835134.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=C9F00_RS10270;product=ferrichrome porin FhuA;protein_id=WP_010835134.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	5100	7622	.	-	.	ID=gene-C9F00_RS10275;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9F00_RS10275;old_locus_tag=C9F00_10515
NZ_PYKC01000061.1	Protein Homology	CDS	5100	7622	.	-	0	ID=cds-WP_000918127.1;Parent=gene-C9F00_RS10275;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9F00_RS10275;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	7763	10192	.	-	.	ID=gene-C9F00_RS10280;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9F00_RS10280;old_locus_tag=C9F00_10520
NZ_PYKC01000061.1	Protein Homology	CDS	7763	10192	.	-	0	ID=cds-WP_167850429.1;Parent=gene-C9F00_RS10280;Dbxref=GenBank:WP_167850429.1;Name=WP_167850429.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=C9F00_RS10280;product=ATP-dependent helicase HrpB;protein_id=WP_167850429.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	10265	10795	.	+	.	ID=gene-C9F00_RS10285;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9F00_RS10285;old_locus_tag=C9F00_10525
NZ_PYKC01000061.1	Protein Homology	CDS	10265	10795	.	+	0	ID=cds-WP_001294178.1;Parent=gene-C9F00_RS10285;Dbxref=GenBank:WP_001294178.1;Name=WP_001294178.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9F00_RS10285;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294178.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	10812	11516	.	+	.	ID=gene-C9F00_RS10290;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9F00_RS10290;old_locus_tag=C9F00_10530
NZ_PYKC01000061.1	Protein Homology	CDS	10812	11516	.	+	0	ID=cds-WP_000899408.1;Parent=gene-C9F00_RS10290;Dbxref=GenBank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9F00_RS10290;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	11693	12148	.	+	.	ID=gene-C9F00_RS10295;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9F00_RS10295;old_locus_tag=C9F00_10535
NZ_PYKC01000061.1	Protein Homology	CDS	11693	12148	.	+	0	ID=cds-WP_001155232.1;Parent=gene-C9F00_RS10295;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9F00_RS10295;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	12217	13113	.	+	.	ID=gene-C9F00_RS10300;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9F00_RS10300;old_locus_tag=C9F00_10540
NZ_PYKC01000061.1	Protein Homology	CDS	12217	13113	.	+	0	ID=cds-WP_135369507.1;Parent=gene-C9F00_RS10300;Dbxref=GenBank:WP_135369507.1;Name=WP_135369507.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9F00_RS10300;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_135369507.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	13275	14672	.	+	.	ID=gene-C9F00_RS10305;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9F00_RS10305;old_locus_tag=C9F00_10545
NZ_PYKC01000061.1	Protein Homology	CDS	13275	14672	.	+	0	ID=cds-WP_204367155.1;Parent=gene-C9F00_RS10305;Dbxref=GenBank:WP_204367155.1;Name=WP_204367155.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9F00_RS10305;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204367155.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	14669	15148	.	+	.	ID=gene-C9F00_RS10310;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9F00_RS10310;old_locus_tag=C9F00_10550
NZ_PYKC01000061.1	Protein Homology	CDS	14669	15148	.	+	0	ID=cds-WP_000150777.1;Parent=gene-C9F00_RS10310;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9F00_RS10310;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	15269	16060	.	+	.	ID=gene-C9F00_RS10315;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9F00_RS10315;old_locus_tag=C9F00_10555
NZ_PYKC01000061.1	Protein Homology	CDS	15269	16060	.	+	0	ID=cds-WP_000805489.1;Parent=gene-C9F00_RS10315;Dbxref=GenBank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9F00_RS10315;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	16186	17040	.	+	.	ID=gene-C9F00_RS10320;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9F00_RS10320;old_locus_tag=C9F00_10560
NZ_PYKC01000061.1	Protein Homology	CDS	16186	17040	.	+	0	ID=cds-WP_061424198.1;Parent=gene-C9F00_RS10320;Dbxref=GenBank:WP_061424198.1;Name=WP_061424198.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9F00_RS10320;product=pantoate--beta-alanine ligase;protein_id=WP_061424198.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	17135	17515	.	+	.	ID=gene-C9F00_RS10325;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9F00_RS10325;old_locus_tag=C9F00_10565
NZ_PYKC01000061.1	Protein Homology	CDS	17135	17515	.	+	0	ID=cds-WP_000621526.1;Parent=gene-C9F00_RS10325;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9F00_RS10325;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	17522	18751	.	-	.	ID=gene-C9F00_RS10330;Name=C9F00_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10330;old_locus_tag=C9F00_10570
NZ_PYKC01000061.1	Protein Homology	CDS	17522	18751	.	-	0	ID=cds-WP_135369506.1;Parent=gene-C9F00_RS10330;Dbxref=GenBank:WP_135369506.1;Name=WP_135369506.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9F00_RS10330;product=polysaccharide deacetylase family protein;protein_id=WP_135369506.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	18813	19253	.	-	.	ID=gene-C9F00_RS10335;Name=C9F00_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10335;old_locus_tag=C9F00_10575
NZ_PYKC01000061.1	Protein Homology	CDS	18813	19253	.	-	0	ID=cds-WP_000901958.1;Parent=gene-C9F00_RS10335;Dbxref=GenBank:WP_000901958.1;Name=WP_000901958.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9F00_RS10335;product=PTS sugar transporter subunit IIA;protein_id=WP_000901958.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	19623	20162	.	+	.	ID=gene-C9F00_RS10340;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=C9F00_RS10340;old_locus_tag=C9F00_10580
NZ_PYKC01000061.1	Protein Homology	CDS	19623	20162	.	+	0	ID=cds-WP_001821456.1;Parent=gene-C9F00_RS10340;Dbxref=GenBank:WP_001821456.1;Name=WP_001821456.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9F00_RS10340;product=Sti fimbria major subunit StiA;protein_id=WP_001821456.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	20210	20893	.	+	.	ID=gene-C9F00_RS10345;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9F00_RS10345;old_locus_tag=C9F00_10585
NZ_PYKC01000061.1	Protein Homology	CDS	20210	20893	.	+	0	ID=cds-WP_001086408.1;Parent=gene-C9F00_RS10345;Dbxref=GenBank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9F00_RS10345;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	20920	23466	.	+	.	ID=gene-C9F00_RS10350;Name=C9F00_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10350;old_locus_tag=C9F00_10590
NZ_PYKC01000061.1	Protein Homology	CDS	20920	23466	.	+	0	ID=cds-WP_135369117.1;Parent=gene-C9F00_RS10350;Dbxref=GenBank:WP_135369117.1;Name=WP_135369117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F00_RS10350;product=fimbrial outer membrane usher protein;protein_id=WP_135369117.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	23475	24551	.	+	.	ID=gene-C9F00_RS10355;Name=C9F00_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10355;old_locus_tag=C9F00_10595
NZ_PYKC01000061.1	Protein Homology	CDS	23475	24551	.	+	0	ID=cds-WP_135369118.1;Parent=gene-C9F00_RS10355;Dbxref=GenBank:WP_135369118.1;Name=WP_135369118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F00_RS10355;product=fimbrial protein;protein_id=WP_135369118.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	24671	25441	.	-	.	ID=gene-C9F00_RS10360;Name=C9F00_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10360;old_locus_tag=C9F00_10600
NZ_PYKC01000061.1	Protein Homology	CDS	24671	25441	.	-	0	ID=cds-WP_000983416.1;Parent=gene-C9F00_RS10360;Dbxref=GenBank:WP_000983416.1;Name=WP_000983416.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F00_RS10360;product=ABC transporter permease;protein_id=WP_000983416.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	25438	26364	.	-	.	ID=gene-C9F00_RS10365;Name=C9F00_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10365;old_locus_tag=C9F00_10605
NZ_PYKC01000061.1	Protein Homology	CDS	25438	26364	.	-	0	ID=cds-WP_000150619.1;Parent=gene-C9F00_RS10365;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9F00_RS10365;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	26473	27135	.	+	.	ID=gene-C9F00_RS10370;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9F00_RS10370;old_locus_tag=C9F00_10610
NZ_PYKC01000061.1	Protein Homology	CDS	26473	27135	.	+	0	ID=cds-WP_000651591.1;Parent=gene-C9F00_RS10370;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9F00_RS10370;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	27193	27729	.	-	.	ID=gene-C9F00_RS10375;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9F00_RS10375;old_locus_tag=C9F00_10615
NZ_PYKC01000061.1	Protein Homology	CDS	27193	27729	.	-	0	ID=cds-WP_000683343.1;Parent=gene-C9F00_RS10375;Dbxref=GenBank:WP_000683343.1;Name=WP_000683343.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9F00_RS10375;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683343.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	27935	30325	.	+	.	ID=gene-C9F00_RS10380;Name=C9F00_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10380;old_locus_tag=C9F00_10620
NZ_PYKC01000061.1	Protein Homology	CDS	27935	30325	.	+	0	ID=cds-WP_000829727.1;Parent=gene-C9F00_RS10380;Dbxref=GenBank:WP_000829727.1;Name=WP_000829727.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9F00_RS10380;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829727.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	30417	32027	.	-	.	ID=gene-C9F00_RS10385;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9F00_RS10385;old_locus_tag=C9F00_10625
NZ_PYKC01000061.1	Protein Homology	CDS	30417	32027	.	-	0	ID=cds-WP_000946046.1;Parent=gene-C9F00_RS10385;Dbxref=GenBank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9F00_RS10385;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	32229	32576	.	+	.	ID=gene-C9F00_RS10390;Name=C9F00_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10390;old_locus_tag=C9F00_10630
NZ_PYKC01000061.1	Protein Homology	CDS	32229	32576	.	+	0	ID=cds-WP_000846613.1;Parent=gene-C9F00_RS10390;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9F00_RS10390;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	32683	33543	.	+	.	ID=gene-C9F00_RS10395;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9F00_RS10395;old_locus_tag=C9F00_10635
NZ_PYKC01000061.1	Protein Homology	CDS	32683	33543	.	+	0	ID=cds-WP_023209229.1;Parent=gene-C9F00_RS10395;Dbxref=GenBank:WP_023209229.1;Name=WP_023209229.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9F00_RS10395;product=polyamine aminopropyltransferase;protein_id=WP_023209229.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	33564	34358	.	+	.	ID=gene-C9F00_RS10400;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9F00_RS10400;old_locus_tag=C9F00_10640
NZ_PYKC01000061.1	Protein Homology	CDS	33564	34358	.	+	0	ID=cds-WP_000734293.1;Parent=gene-C9F00_RS10400;Dbxref=GenBank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9F00_RS10400;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	34388	35155	.	-	.	ID=gene-C9F00_RS10405;Name=C9F00_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10405;old_locus_tag=C9F00_10645
NZ_PYKC01000061.1	Protein Homology	CDS	34388	35155	.	-	0	ID=cds-WP_000678254.1;Parent=gene-C9F00_RS10405;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9F00_RS10405;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	35165	36148	.	-	.	ID=gene-C9F00_RS10410;Name=C9F00_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10410;old_locus_tag=C9F00_10650
NZ_PYKC01000061.1	Protein Homology	CDS	35165	36148	.	-	0	ID=cds-WP_000448753.1;Parent=gene-C9F00_RS10410;Dbxref=GenBank:WP_000448753.1;Name=WP_000448753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9F00_RS10410;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448753.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	36138	37409	.	-	.	ID=gene-C9F00_RS10415;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=C9F00_RS10415;old_locus_tag=C9F00_10655
NZ_PYKC01000061.1	Protein Homology	CDS	36138	37409	.	-	0	ID=cds-WP_135369119.1;Parent=gene-C9F00_RS10415;Dbxref=GenBank:WP_135369119.1;Name=WP_135369119.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9F00_RS10415;product=D-threonate kinase;protein_id=WP_135369119.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	37406	38359	.	-	.	ID=gene-C9F00_RS10420;Name=C9F00_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10420;old_locus_tag=C9F00_10660
NZ_PYKC01000061.1	Protein Homology	CDS	37406	38359	.	-	0	ID=cds-WP_001022089.1;Parent=gene-C9F00_RS10420;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9F00_RS10420;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	38594	38956	.	-	.	ID=gene-C9F00_RS10425;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9F00_RS10425;old_locus_tag=C9F00_10665
NZ_PYKC01000061.1	Protein Homology	CDS	38594	38956	.	-	0	ID=cds-WP_000384308.1;Parent=gene-C9F00_RS10425;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9F00_RS10425;product=protein YacL;protein_id=WP_000384308.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	39227	39550	.	+	.	ID=gene-C9F00_RS10430;Name=C9F00_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10430;old_locus_tag=C9F00_10670
NZ_PYKC01000061.1	Protein Homology	CDS	39227	39550	.	+	0	ID=cds-WP_001101536.1;Parent=gene-C9F00_RS10430;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9F00_RS10430;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	39968	40432	.	+	.	ID=gene-C9F00_RS10435;Name=C9F00_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10435;old_locus_tag=C9F00_10675
NZ_PYKC01000061.1	Protein Homology	CDS	39968	40432	.	+	0	ID=cds-WP_000110437.1;Parent=gene-C9F00_RS10435;Dbxref=GenBank:WP_000110437.1;Name=WP_000110437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9F00_RS10435;product=membrane protein;protein_id=WP_000110437.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	40472	43069	.	-	.	ID=gene-C9F00_RS10440;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9F00_RS10440;old_locus_tag=C9F00_10680
NZ_PYKC01000061.1	Protein Homology	CDS	40472	43069	.	-	0	ID=cds-WP_135369120.1;Parent=gene-C9F00_RS10440;Dbxref=GenBank:WP_135369120.1;Name=WP_135369120.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9F00_RS10440;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_135369120.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	43458	45083	.	+	.	ID=gene-C9F00_RS10445;Name=C9F00_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10445;old_locus_tag=C9F00_10690
NZ_PYKC01000061.1	Protein Homology	CDS	43458	45083	.	+	0	ID=cds-WP_064043215.1;Parent=gene-C9F00_RS10445;Dbxref=GenBank:WP_064043215.1;Name=WP_064043215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9F00_RS10445;product=DUF3300 domain-containing protein;protein_id=WP_064043215.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	45096	45887	.	+	.	ID=gene-C9F00_RS10450;Name=C9F00_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10450;old_locus_tag=C9F00_10695
NZ_PYKC01000061.1	Protein Homology	CDS	45096	45887	.	+	0	ID=cds-WP_135492279.1;Parent=gene-C9F00_RS10450;Dbxref=GenBank:WP_135492279.1;Name=WP_135492279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9F00_RS10450;product=DUF2950 family protein;protein_id=WP_135492279.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	45925	46209	.	-	.	ID=gene-C9F00_RS10455;Name=C9F00_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10455;old_locus_tag=C9F00_10700
NZ_PYKC01000061.1	Protein Homology	CDS	45925	46209	.	-	0	ID=cds-WP_135369121.1;Parent=gene-C9F00_RS10455;Dbxref=GenBank:WP_135369121.1;Name=WP_135369121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9F00_RS10455;product=hypothetical protein;protein_id=WP_135369121.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	46498	47922	.	-	.	ID=gene-C9F00_RS10460;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9F00_RS10460;old_locus_tag=C9F00_10705
NZ_PYKC01000061.1	Protein Homology	CDS	46498	47922	.	-	0	ID=cds-WP_135492281.1;Parent=gene-C9F00_RS10460;Dbxref=GenBank:WP_135492281.1;Name=WP_135492281.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F00_RS10460;product=dihydrolipoyl dehydrogenase;protein_id=WP_135492281.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	48124	50016	.	-	.	ID=gene-C9F00_RS10465;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9F00_RS10465;old_locus_tag=C9F00_10710
NZ_PYKC01000061.1	Protein Homology	CDS	48124	50016	.	-	0	ID=cds-WP_023239707.1;Parent=gene-C9F00_RS10465;Dbxref=GenBank:WP_023239707.1;Name=WP_023239707.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9F00_RS10465;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023239707.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	50031	52694	.	-	.	ID=gene-C9F00_RS10470;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9F00_RS10470;old_locus_tag=C9F00_10715
NZ_PYKC01000061.1	Protein Homology	CDS	50031	52694	.	-	0	ID=cds-WP_000003852.1;Parent=gene-C9F00_RS10470;Dbxref=GenBank:WP_000003852.1;Name=WP_000003852.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9F00_RS10470;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003852.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	53001	53765	.	-	.	ID=gene-C9F00_RS10475;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9F00_RS10475;old_locus_tag=C9F00_10725
NZ_PYKC01000061.1	Protein Homology	CDS	53001	53765	.	-	0	ID=cds-WP_000331771.1;Parent=gene-C9F00_RS10475;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9F00_RS10475;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	54328	55701	.	+	.	ID=gene-C9F00_RS10480;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9F00_RS10480;old_locus_tag=C9F00_10730
NZ_PYKC01000061.1	Protein Homology	CDS	54328	55701	.	+	0	ID=cds-WP_000969487.1;Parent=gene-C9F00_RS10480;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9F00_RS10480;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	pseudogene	55865	57271	.	+	.	ID=gene-C9F00_RS10485;Name=C9F00_RS10485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS10485;old_locus_tag=C9F00_10735;pseudo=true
NZ_PYKC01000061.1	Protein Homology	CDS	55865	57271	.	+	0	ID=cds-C9F00_RS10485;Parent=gene-C9F00_RS10485;Note=internal stop;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9F00_RS10485;product=glycoside-pentoside-hexuronide (GPH):cation symporter;pseudo=true;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	57271	58221	.	+	.	ID=gene-C9F00_RS10490;Name=C9F00_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10490;old_locus_tag=C9F00_10740
NZ_PYKC01000061.1	Protein Homology	CDS	57271	58221	.	+	0	ID=cds-WP_135369122.1;Parent=gene-C9F00_RS10490;Dbxref=GenBank:WP_135369122.1;Name=WP_135369122.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9F00_RS10490;product=glycoside hydrolase family 43 protein;protein_id=WP_135369122.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	58313	59167	.	-	.	ID=gene-C9F00_RS10495;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9F00_RS10495;old_locus_tag=C9F00_10745
NZ_PYKC01000061.1	Protein Homology	CDS	58313	59167	.	-	0	ID=cds-WP_000172039.1;Parent=gene-C9F00_RS10495;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9F00_RS10495;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	59164	59727	.	-	.	ID=gene-C9F00_RS10500;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9F00_RS10500;old_locus_tag=C9F00_10750
NZ_PYKC01000061.1	Protein Homology	CDS	59164	59727	.	-	0	ID=cds-WP_000936326.1;Parent=gene-C9F00_RS10500;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9F00_RS10500;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	59815	60708	.	+	.	ID=gene-C9F00_RS10505;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9F00_RS10505;old_locus_tag=C9F00_10755
NZ_PYKC01000061.1	Protein Homology	CDS	59815	60708	.	+	0	ID=cds-WP_001135135.1;Parent=gene-C9F00_RS10505;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9F00_RS10505;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	60930	61367	.	+	.	ID=gene-C9F00_RS10515;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9F00_RS10515;old_locus_tag=C9F00_10765
NZ_PYKC01000061.1	Protein Homology	CDS	60930	61367	.	+	0	ID=cds-WP_000414989.1;Parent=gene-C9F00_RS10515;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9F00_RS10515;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	61377	62762	.	+	.	ID=gene-C9F00_RS10520;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9F00_RS10520;old_locus_tag=C9F00_10770
NZ_PYKC01000061.1	Protein Homology	CDS	61377	62762	.	+	0	ID=cds-WP_135369123.1;Parent=gene-C9F00_RS10520;Dbxref=GenBank:WP_135369123.1;Name=WP_135369123.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9F00_RS10520;product=type II secretion system protein GspE;protein_id=WP_135369123.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	62752	63954	.	+	.	ID=gene-C9F00_RS10525;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9F00_RS10525;old_locus_tag=C9F00_10775
NZ_PYKC01000061.1	Protein Homology	CDS	62752	63954	.	+	0	ID=cds-WP_135369124.1;Parent=gene-C9F00_RS10525;Dbxref=GenBank:WP_135369124.1;Name=WP_135369124.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9F00_RS10525;product=protein transport protein HofC;protein_id=WP_135369124.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	63985	65028	.	-	.	ID=gene-C9F00_RS10530;Name=C9F00_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10530;old_locus_tag=C9F00_10780
NZ_PYKC01000061.1	Protein Homology	CDS	63985	65028	.	-	0	ID=cds-WP_001217365.1;Parent=gene-C9F00_RS10530;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=C9F00_RS10530;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	65254	65874	.	+	.	ID=gene-C9F00_RS10535;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9F00_RS10535;old_locus_tag=C9F00_10785
NZ_PYKC01000061.1	Protein Homology	CDS	65254	65874	.	+	0	ID=cds-WP_001270913.1;Parent=gene-C9F00_RS10535;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9F00_RS10535;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	65874	66617	.	+	.	ID=gene-C9F00_RS10540;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9F00_RS10540;old_locus_tag=C9F00_10790
NZ_PYKC01000061.1	Protein Homology	CDS	65874	66617	.	+	0	ID=cds-WP_000557441.1;Parent=gene-C9F00_RS10540;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9F00_RS10540;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	66627	66818	.	+	.	ID=gene-C9F00_RS10545;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9F00_RS10545;old_locus_tag=C9F00_10795
NZ_PYKC01000061.1	Protein Homology	CDS	66627	66818	.	+	0	ID=cds-WP_001286419.1;Parent=gene-C9F00_RS10545;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9F00_RS10545;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	66815	67756	.	-	.	ID=gene-C9F00_RS10550;Name=C9F00_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10550;old_locus_tag=C9F00_10800
NZ_PYKC01000061.1	Protein Homology	CDS	66815	67756	.	-	0	ID=cds-WP_135369125.1;Parent=gene-C9F00_RS10550;Dbxref=GenBank:WP_135369125.1;Name=WP_135369125.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9F00_RS10550;product=LysR family transcriptional regulator;protein_id=WP_135369125.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	67842	68831	.	+	.	ID=gene-C9F00_RS10555;Name=C9F00_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10555;old_locus_tag=C9F00_10805
NZ_PYKC01000061.1	Protein Homology	CDS	67842	68831	.	+	0	ID=cds-WP_047607050.1;Parent=gene-C9F00_RS10555;Dbxref=GenBank:WP_047607050.1;Name=WP_047607050.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9F00_RS10555;product=aldo/keto reductase;protein_id=WP_047607050.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	68865	69260	.	-	.	ID=gene-C9F00_RS10560;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9F00_RS10560;old_locus_tag=C9F00_10810
NZ_PYKC01000061.1	Protein Homology	CDS	68865	69260	.	-	0	ID=cds-WP_000736058.1;Parent=gene-C9F00_RS10560;Dbxref=GenBank:WP_000736058.1;Name=WP_000736058.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=C9F00_RS10560;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736058.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	69412	72117	.	-	.	ID=gene-C9F00_RS10565;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9F00_RS10565;old_locus_tag=C9F00_10815
NZ_PYKC01000061.1	Protein Homology	CDS	69412	72117	.	-	0	ID=cds-WP_000905756.1;Parent=gene-C9F00_RS10565;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9F00_RS10565;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	72179	72676	.	-	.	ID=gene-C9F00_RS10570;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9F00_RS10570;old_locus_tag=C9F00_10820
NZ_PYKC01000061.1	Protein Homology	CDS	72179	72676	.	-	0	ID=cds-WP_000014336.1;Parent=gene-C9F00_RS10570;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9F00_RS10570;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	72954	73871	.	-	.	ID=gene-C9F00_RS10575;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9F00_RS10575;old_locus_tag=C9F00_10825
NZ_PYKC01000061.1	Protein Homology	CDS	72954	73871	.	-	0	ID=cds-WP_000595487.1;Parent=gene-C9F00_RS10575;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9F00_RS10575;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	73972	75123	.	-	.	ID=gene-C9F00_RS10580;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9F00_RS10580;old_locus_tag=C9F00_10830
NZ_PYKC01000061.1	Protein Homology	CDS	73972	75123	.	-	0	ID=cds-WP_000462785.1;Parent=gene-C9F00_RS10580;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9F00_RS10580;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	75184	76446	.	-	.	ID=gene-C9F00_RS10585;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9F00_RS10585;old_locus_tag=C9F00_10835
NZ_PYKC01000061.1	Protein Homology	CDS	75184	76446	.	-	0	ID=cds-WP_000588463.1;Parent=gene-C9F00_RS10585;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9F00_RS10585;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	76443	77273	.	-	.	ID=gene-C9F00_RS10590;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9F00_RS10590;old_locus_tag=C9F00_10840
NZ_PYKC01000061.1	Protein Homology	CDS	76443	77273	.	-	0	ID=cds-WP_000075728.1;Parent=gene-C9F00_RS10590;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9F00_RS10590;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	77275	78195	.	-	.	ID=gene-C9F00_RS10595;Name=C9F00_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10595;old_locus_tag=C9F00_10845
NZ_PYKC01000061.1	Protein Homology	CDS	77275	78195	.	-	0	ID=cds-WP_000763906.1;Parent=gene-C9F00_RS10595;Dbxref=GenBank:WP_000763906.1;Name=WP_000763906.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9F00_RS10595;product=D-alanine--D-alanine ligase;protein_id=WP_000763906.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	78188	79663	.	-	.	ID=gene-C9F00_RS10600;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9F00_RS10600;old_locus_tag=C9F00_10850
NZ_PYKC01000061.1	Protein Homology	CDS	78188	79663	.	-	0	ID=cds-WP_001096072.1;Parent=gene-C9F00_RS10600;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9F00_RS10600;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11
NZ_PYKC01000061.1	RefSeq	gene	79782	80377	.	-	.	ID=gene-C9F00_RS10605;Name=C9F00_RS10605;end_range=80377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10605;old_locus_tag=C9F00_10855;partial=true
NZ_PYKC01000061.1	Protein Homology	CDS	79782	80377	.	-	2	ID=cds-WP_280954465.1;Parent=gene-C9F00_RS10605;Dbxref=GenBank:WP_280954465.1;Name=WP_280954465.1;Ontology_term=GO:0016758;end_range=80377,.;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F00_RS10605;partial=true;product=glycosyltransferase;protein_id=WP_280954465.1;transl_table=11
##sequence-region NZ_PYKC01000146.1 1 7525
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000146.1	RefSeq	region	1	7525	.	+	.	ID=NZ_PYKC01000146.1:1..7525;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000146.1	RefSeq	gene	111	242	.	-	.	ID=gene-C9F00_RS22055;Name=C9F00_RS22055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS22055;old_locus_tag=C9F00_22575
NZ_PYKC01000146.1	cmsearch	ncRNA	111	242	.	-	.	ID=rna-C9F00_RS22055;Parent=gene-C9F00_RS22055;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS22055;product=RtT sRNA
NZ_PYKC01000146.1	cmsearch	exon	111	242	.	-	.	ID=exon-C9F00_RS22055-1;Parent=rna-C9F00_RS22055;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS22055;product=RtT sRNA
NZ_PYKC01000146.1	RefSeq	gene	287	371	.	-	.	ID=gene-C9F00_RS22060;Name=C9F00_RS22060;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS22060;old_locus_tag=C9F00_22580
NZ_PYKC01000146.1	tRNAscan-SE	tRNA	287	371	.	-	.	ID=rna-C9F00_RS22060;Parent=gene-C9F00_RS22060;anticodon=(pos:complement(335..337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS22060;product=tRNA-Tyr
NZ_PYKC01000146.1	tRNAscan-SE	exon	287	371	.	-	.	ID=exon-C9F00_RS22060-1;Parent=rna-C9F00_RS22060;anticodon=(pos:complement(335..337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS22060;product=tRNA-Tyr
NZ_PYKC01000146.1	RefSeq	gene	400	541	.	-	.	ID=gene-C9F00_RS22065;Name=C9F00_RS22065;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS22065;old_locus_tag=C9F00_22585
NZ_PYKC01000146.1	cmsearch	ncRNA	400	541	.	-	.	ID=rna-C9F00_RS22065;Parent=gene-C9F00_RS22065;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS22065;product=RtT sRNA
NZ_PYKC01000146.1	cmsearch	exon	400	541	.	-	.	ID=exon-C9F00_RS22065-1;Parent=rna-C9F00_RS22065;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS22065;product=RtT sRNA
NZ_PYKC01000146.1	RefSeq	gene	712	1554	.	-	.	ID=gene-C9F00_RS22070;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9F00_RS22070;old_locus_tag=C9F00_22590
NZ_PYKC01000146.1	Protein Homology	CDS	712	1554	.	-	0	ID=cds-WP_001191156.1;Parent=gene-C9F00_RS22070;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9F00_RS22070;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	1605	2063	.	-	.	ID=gene-C9F00_RS22075;Name=C9F00_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22075;old_locus_tag=C9F00_22595
NZ_PYKC01000146.1	Protein Homology	CDS	1605	2063	.	-	0	ID=cds-WP_001540172.1;Parent=gene-C9F00_RS22075;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9F00_RS22075;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	2174	3079	.	+	.	ID=gene-C9F00_RS22080;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9F00_RS22080;old_locus_tag=C9F00_22600
NZ_PYKC01000146.1	Protein Homology	CDS	2174	3079	.	+	0	ID=cds-WP_001230575.1;Parent=gene-C9F00_RS22080;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9F00_RS22080;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	3170	4183	.	+	.	ID=gene-C9F00_RS22085;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9F00_RS22085;old_locus_tag=C9F00_22605
NZ_PYKC01000146.1	Protein Homology	CDS	3170	4183	.	+	0	ID=cds-WP_000193432.1;Parent=gene-C9F00_RS22085;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9F00_RS22085;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	4386	5294	.	+	.	ID=gene-C9F00_RS22090;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9F00_RS22090;old_locus_tag=C9F00_22610
NZ_PYKC01000146.1	Protein Homology	CDS	4386	5294	.	+	0	ID=cds-WP_135369082.1;Parent=gene-C9F00_RS22090;Dbxref=GenBank:WP_135369082.1;Name=WP_135369082.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9F00_RS22090;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_135369082.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	5426	5839	.	-	.	ID=gene-C9F00_RS22095;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9F00_RS22095;old_locus_tag=C9F00_22615
NZ_PYKC01000146.1	Protein Homology	CDS	5426	5839	.	-	0	ID=cds-WP_001287383.1;Parent=gene-C9F00_RS22095;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9F00_RS22095;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	gene	6502	7119	.	+	.	ID=gene-C9F00_RS22100;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9F00_RS22100;old_locus_tag=C9F00_22620
NZ_PYKC01000146.1	Protein Homology	CDS	6502	7119	.	+	0	ID=cds-WP_000068097.1;Parent=gene-C9F00_RS22100;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9F00_RS22100;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11
NZ_PYKC01000146.1	RefSeq	pseudogene	7316	7525	.	-	.	ID=gene-C9F00_RS22105;Name=C9F00_RS22105;end_range=7525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22105;old_locus_tag=C9F00_22625;partial=true;pseudo=true
NZ_PYKC01000146.1	Protein Homology	CDS	7316	7525	.	-	0	ID=cds-C9F00_RS22105;Parent=gene-C9F00_RS22105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9F00_RS22105;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000060.1 1 7430
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000060.1	RefSeq	region	1	7430	.	+	.	ID=NZ_PYKC01000060.1:1..7430;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000060.1	RefSeq	gene	178	1404	.	+	.	ID=gene-C9F00_RS10210;Name=C9F00_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10210;old_locus_tag=C9F00_10450
NZ_PYKC01000060.1	Protein Homology	CDS	178	1404	.	+	0	ID=cds-WP_061378611.1;Parent=gene-C9F00_RS10210;Dbxref=GenBank:WP_061378611.1;Name=WP_061378611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9F00_RS10210;product=DUF3748 domain-containing protein;protein_id=WP_061378611.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	1406	1738	.	-	.	ID=gene-C9F00_RS10215;Name=C9F00_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10215;old_locus_tag=C9F00_10455
NZ_PYKC01000060.1	Protein Homology	CDS	1406	1738	.	-	0	ID=cds-WP_001581211.1;Parent=gene-C9F00_RS10215;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9F00_RS10215;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11
NZ_PYKC01000060.1	cmsearch	sequence_feature	1981	2054	.	+	.	ID=id-NZ_PYKC01000060.1:1981..2054;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000060.1	RefSeq	gene	2048	2461	.	+	.	ID=gene-C9F00_RS10220;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9F00_RS10220;old_locus_tag=C9F00_10460
NZ_PYKC01000060.1	Protein Homology	CDS	2048	2461	.	+	0	ID=cds-WP_088759359.1;Parent=gene-C9F00_RS10220;Dbxref=GenBank:WP_088759359.1;Name=WP_088759359.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9F00_RS10220;product=small heat shock chaperone IbpA;protein_id=WP_088759359.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	2571	2999	.	+	.	ID=gene-C9F00_RS10225;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9F00_RS10225;old_locus_tag=C9F00_10465
NZ_PYKC01000060.1	Protein Homology	CDS	2571	2999	.	+	0	ID=cds-WP_001246919.1;Parent=gene-C9F00_RS10225;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9F00_RS10225;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	3188	4849	.	+	.	ID=gene-C9F00_RS10230;Name=C9F00_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10230;old_locus_tag=C9F00_10470
NZ_PYKC01000060.1	Protein Homology	CDS	3188	4849	.	+	0	ID=cds-WP_001279793.1;Parent=gene-C9F00_RS10230;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F00_RS10230;product=putative transporter;protein_id=WP_001279793.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	5293	5640	.	+	.	ID=gene-C9F00_RS10235;Name=C9F00_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10235;old_locus_tag=C9F00_10475
NZ_PYKC01000060.1	Protein Homology	CDS	5293	5640	.	+	0	ID=cds-WP_000703964.1;Parent=gene-C9F00_RS10235;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9F00_RS10235;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	5630	5992	.	+	.	ID=gene-C9F00_RS10240;Name=C9F00_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10240;old_locus_tag=C9F00_10480
NZ_PYKC01000060.1	Protein Homology	CDS	5630	5992	.	+	0	ID=cds-WP_001113454.1;Parent=gene-C9F00_RS10240;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9F00_RS10240;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	5989	6519	.	+	.	ID=gene-C9F00_RS10245;Name=C9F00_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10245;old_locus_tag=C9F00_10485
NZ_PYKC01000060.1	Protein Homology	CDS	5989	6519	.	+	0	ID=cds-WP_000147833.1;Parent=gene-C9F00_RS10245;Dbxref=GenBank:WP_000147833.1;Name=WP_000147833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9F00_RS10245;product=radical SAM protein;protein_id=WP_000147833.1;transl_table=11
NZ_PYKC01000060.1	RefSeq	gene	6601	7430	.	-	.	ID=gene-C9F00_RS10250;Name=dsdA;end_range=7430,.;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9F00_RS10250;old_locus_tag=C9F00_10490;partial=true
NZ_PYKC01000060.1	Protein Homology	CDS	6601	7430	.	-	2	ID=cds-WP_135492277.1;Parent=gene-C9F00_RS10250;Dbxref=GenBank:WP_135492277.1;Name=WP_135492277.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;end_range=7430,.;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9F00_RS10250;partial=true;product=D-serine ammonia-lyase;protein_id=WP_135492277.1;transl_table=11
##sequence-region NZ_PYKC01000165.1 1 271
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000165.1	RefSeq	region	1	271	.	+	.	ID=NZ_PYKC01000165.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000165.1	RefSeq	pseudogene	1	271	.	+	.	ID=gene-C9F00_RS23505;Name=C9F00_RS23505;end_range=271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23505;old_locus_tag=C9F00_24045;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000165.1	Protein Homology	CDS	1	271	.	+	1	ID=cds-C9F00_RS23505;Parent=gene-C9F00_RS23505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505351.1;locus_tag=C9F00_RS23505;partial=true;product=electron transport complex subunit RsxC;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000052.1 1 7407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000052.1	RefSeq	region	1	7407	.	+	.	ID=NZ_PYKC01000052.1:1..7407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000052.1	RefSeq	pseudogene	165	683	.	+	.	ID=gene-C9F00_RS24400;Name=C9F00_RS24400;end_range=683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24400;old_locus_tag=C9F00_08405;partial=true;pseudo=true
NZ_PYKC01000052.1	Protein Homology	CDS	165	683	.	+	0	ID=cds-C9F00_RS24400;Parent=gene-C9F00_RS24400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;end_range=683,.;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012738.6;locus_tag=C9F00_RS24400;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_PYKC01000052.1	RefSeq	pseudogene	724	1065	.	+	.	ID=gene-C9F00_RS08240;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=C9F00_RS08240;old_locus_tag=C9F00_08410;partial=true;pseudo=true;start_range=.,724
NZ_PYKC01000052.1	Protein Homology	CDS	724	1065	.	+	0	ID=cds-C9F00_RS08240;Parent=gene-C9F00_RS08240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F00_RS08240;partial=true;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;start_range=.,724;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	1080	1193	.	+	.	ID=gene-C9F00_RS08245;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=C9F00_RS08245;old_locus_tag=C9F00_08415
NZ_PYKC01000052.1	Protein Homology	CDS	1080	1193	.	+	0	ID=cds-WP_000270278.1;Parent=gene-C9F00_RS08245;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9F00_RS08245;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	1193	1486	.	+	.	ID=gene-C9F00_RS08250;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9F00_RS08250;old_locus_tag=C9F00_08420
NZ_PYKC01000052.1	Protein Homology	CDS	1193	1486	.	+	0	ID=cds-WP_000148790.1;Parent=gene-C9F00_RS08250;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9F00_RS08250;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	1715	2119	.	+	.	ID=gene-C9F00_RS08255;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9F00_RS08255;old_locus_tag=C9F00_08425
NZ_PYKC01000052.1	Protein Homology	CDS	1715	2119	.	+	0	ID=cds-WP_001046240.1;Parent=gene-C9F00_RS08255;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9F00_RS08255;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	2116	2808	.	+	.	ID=gene-C9F00_RS08260;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9F00_RS08260;old_locus_tag=C9F00_08430
NZ_PYKC01000052.1	Protein Homology	CDS	2116	2808	.	+	0	ID=cds-WP_000131318.1;Parent=gene-C9F00_RS08260;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9F00_RS08260;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	2812	3240	.	+	.	ID=gene-C9F00_RS08265;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9F00_RS08265;old_locus_tag=C9F00_08435
NZ_PYKC01000052.1	Protein Homology	CDS	2812	3240	.	+	0	ID=cds-WP_000124676.1;Parent=gene-C9F00_RS08265;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9F00_RS08265;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	3305	4393	.	+	.	ID=gene-C9F00_RS08270;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9F00_RS08270;old_locus_tag=C9F00_08440
NZ_PYKC01000052.1	Protein Homology	CDS	3305	4393	.	+	0	ID=cds-WP_135492242.1;Parent=gene-C9F00_RS08270;Dbxref=GenBank:WP_135492242.1;Name=WP_135492242.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9F00_RS08270;product=cell envelope integrity protein TolA;protein_id=WP_135492242.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	4517	5809	.	+	.	ID=gene-C9F00_RS08275;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9F00_RS08275;old_locus_tag=C9F00_08445
NZ_PYKC01000052.1	Protein Homology	CDS	4517	5809	.	+	0	ID=cds-WP_001562341.1;Parent=gene-C9F00_RS08275;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9F00_RS08275;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	5844	6368	.	+	.	ID=gene-C9F00_RS08280;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9F00_RS08280;old_locus_tag=C9F00_08450
NZ_PYKC01000052.1	Protein Homology	CDS	5844	6368	.	+	0	ID=cds-WP_001176621.1;Parent=gene-C9F00_RS08280;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9F00_RS08280;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	6378	7166	.	+	.	ID=gene-C9F00_RS08285;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9F00_RS08285;old_locus_tag=C9F00_08455
NZ_PYKC01000052.1	Protein Homology	CDS	6378	7166	.	+	0	ID=cds-WP_000097547.1;Parent=gene-C9F00_RS08285;Dbxref=GenBank:WP_000097547.1;Name=WP_000097547.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9F00_RS08285;product=cell division protein CpoB;protein_id=WP_000097547.1;transl_table=11
NZ_PYKC01000052.1	RefSeq	gene	7331	7406	.	+	.	ID=gene-C9F00_RS08290;Name=C9F00_RS08290;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS08290;old_locus_tag=C9F00_08460
NZ_PYKC01000052.1	tRNAscan-SE	tRNA	7331	7406	.	+	.	ID=rna-C9F00_RS08290;Parent=gene-C9F00_RS08290;anticodon=(pos:7364..7366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08290;product=tRNA-Lys
NZ_PYKC01000052.1	tRNAscan-SE	exon	7331	7406	.	+	.	ID=exon-C9F00_RS08290-1;Parent=rna-C9F00_RS08290;anticodon=(pos:7364..7366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08290;product=tRNA-Lys
##sequence-region NZ_PYKC01000050.1 1 7133
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000050.1	RefSeq	region	1	7133	.	+	.	ID=NZ_PYKC01000050.1:1..7133;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000050.1	RefSeq	gene	80	1270	.	+	.	ID=gene-C9F00_RS08145;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9F00_RS08145;old_locus_tag=C9F00_08315
NZ_PYKC01000050.1	Protein Homology	CDS	80	1270	.	+	0	ID=cds-WP_000695415.1;Parent=gene-C9F00_RS08145;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9F00_RS08145;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11
NZ_PYKC01000050.1	RefSeq	gene	1402	2946	.	+	.	ID=gene-C9F00_RS08150;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9F00_RS08150;old_locus_tag=C9F00_08320
NZ_PYKC01000050.1	Protein Homology	CDS	1402	2946	.	+	0	ID=cds-WP_000382570.1;Parent=gene-C9F00_RS08150;Dbxref=GenBank:WP_000382570.1;Name=WP_000382570.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9F00_RS08150;product=maltose ABC transporter permease MalF;protein_id=WP_000382570.1;transl_table=11
NZ_PYKC01000050.1	RefSeq	gene	2961	3851	.	+	.	ID=gene-C9F00_RS08155;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9F00_RS08155;old_locus_tag=C9F00_08325
NZ_PYKC01000050.1	Protein Homology	CDS	2961	3851	.	+	0	ID=cds-WP_001252081.1;Parent=gene-C9F00_RS08155;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9F00_RS08155;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11
NZ_PYKC01000050.1	RefSeq	gene	4017	4427	.	-	.	ID=gene-C9F00_RS08160;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9F00_RS08160;old_locus_tag=C9F00_08330
NZ_PYKC01000050.1	Protein Homology	CDS	4017	4427	.	-	0	ID=cds-WP_000982752.1;Parent=gene-C9F00_RS08160;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9F00_RS08160;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11
NZ_PYKC01000050.1	RefSeq	gene	4570	6666	.	-	.	ID=gene-C9F00_RS08165;Name=C9F00_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08165;old_locus_tag=C9F00_08335
NZ_PYKC01000050.1	Protein Homology	CDS	4570	6666	.	-	0	ID=cds-WP_000750805.1;Parent=gene-C9F00_RS08165;Dbxref=GenBank:WP_000750805.1;Name=WP_000750805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9F00_RS08165;product=YjbH domain-containing protein;protein_id=WP_000750805.1;transl_table=11
NZ_PYKC01000050.1	RefSeq	pseudogene	6666	6869	.	-	.	ID=gene-C9F00_RS08170;Name=C9F00_RS08170;end_range=6869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS08170;old_locus_tag=C9F00_08340;partial=true;pseudo=true
NZ_PYKC01000050.1	Protein Homology	CDS	6666	6869	.	-	0	ID=cds-C9F00_RS08170;Parent=gene-C9F00_RS08170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=C9F00_RS08170;partial=true;product=capsule biosynthesis GfcC family protein;pseudo=true;transl_table=11
NZ_PYKC01000050.1	RefSeq	gene	6832	7104	.	-	.	ID=gene-C9F00_RS08175;Name=C9F00_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08175;old_locus_tag=C9F00_08345
NZ_PYKC01000050.1	Protein Homology	CDS	6832	7104	.	-	0	ID=cds-WP_245306384.1;Parent=gene-C9F00_RS08175;Dbxref=GenBank:WP_245306384.1;Name=WP_245306384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022427.6;locus_tag=C9F00_RS08175;product=DUF2804 family protein;protein_id=WP_245306384.1;transl_table=11
##sequence-region NZ_PYKC01000152.1 1 6881
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000152.1	RefSeq	region	1	6881	.	+	.	ID=NZ_PYKC01000152.1:1..6881;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000152.1	RefSeq	gene	1	484	.	+	.	ID=gene-C9F00_RS22425;Name=C9F00_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22425;old_locus_tag=C9F00_22960;partial=true;start_range=.,1
NZ_PYKC01000152.1	Protein Homology	CDS	1	484	.	+	1	ID=cds-WP_210114166.1;Parent=gene-C9F00_RS22425;Dbxref=GenBank:WP_210114166.1;Name=WP_210114166.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9F00_RS22425;partial=true;product=PilZ domain-containing protein;protein_id=WP_210114166.1;start_range=.,1;transl_table=11
NZ_PYKC01000152.1	RefSeq	gene	495	2795	.	+	.	ID=gene-C9F00_RS22430;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9F00_RS22430;old_locus_tag=C9F00_22965
NZ_PYKC01000152.1	Protein Homology	CDS	495	2795	.	+	0	ID=cds-WP_135369451.1;Parent=gene-C9F00_RS22430;Dbxref=GenBank:WP_135369451.1;Name=WP_135369451.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9F00_RS22430;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_135369451.1;transl_table=11
NZ_PYKC01000152.1	RefSeq	gene	2799	3908	.	+	.	ID=gene-C9F00_RS22435;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9F00_RS22435;old_locus_tag=C9F00_22970
NZ_PYKC01000152.1	Protein Homology	CDS	2799	3908	.	+	0	ID=cds-WP_135369452.1;Parent=gene-C9F00_RS22435;Dbxref=GenBank:WP_135369452.1;Name=WP_135369452.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9F00_RS22435;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_135369452.1;transl_table=11
NZ_PYKC01000152.1	RefSeq	pseudogene	3890	6619	.	+	.	ID=gene-C9F00_RS22440;Name=bcsC;end_range=6619,.;gbkey=Gene;gene=bcsC;gene_biotype=pseudogene;locus_tag=C9F00_RS22440;old_locus_tag=C9F00_22975;partial=true;pseudo=true
NZ_PYKC01000152.1	Protein Homology	CDS	3890	6619	.	+	0	ID=cds-C9F00_RS22440;Parent=gene-C9F00_RS22440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030244,GO:0005515,GO:0019867;end_range=6619,.;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F00_RS22440;partial=true;product=cellulose synthase complex outer membrane protein BcsC;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000105.1 1 6606
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000105.1	RefSeq	region	1	6606	.	+	.	ID=NZ_PYKC01000105.1:1..6606;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000105.1	RefSeq	gene	156	902	.	-	.	ID=gene-C9F00_RS17070;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9F00_RS17070;old_locus_tag=C9F00_17495
NZ_PYKC01000105.1	Protein Homology	CDS	156	902	.	-	0	ID=cds-WP_135369415.1;Parent=gene-C9F00_RS17070;Dbxref=GenBank:WP_135369415.1;Name=WP_135369415.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9F00_RS17070;product=thiol:disulfide interchange protein DsbG;protein_id=WP_135369415.1;transl_table=11
NZ_PYKC01000105.1	RefSeq	gene	1343	1906	.	+	.	ID=gene-C9F00_RS17075;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9F00_RS17075;old_locus_tag=C9F00_17500
NZ_PYKC01000105.1	Protein Homology	CDS	1343	1906	.	+	0	ID=cds-WP_000052802.1;Parent=gene-C9F00_RS17075;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9F00_RS17075;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11
NZ_PYKC01000105.1	RefSeq	gene	2148	3713	.	+	.	ID=gene-C9F00_RS17080;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9F00_RS17080;old_locus_tag=C9F00_17505
NZ_PYKC01000105.1	Protein Homology	CDS	2148	3713	.	+	0	ID=cds-WP_000887644.1;Parent=gene-C9F00_RS17080;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9F00_RS17080;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11
NZ_PYKC01000105.1	RefSeq	gene	4046	4606	.	+	.	ID=gene-C9F00_RS17085;Name=C9F00_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17085;old_locus_tag=C9F00_17510
NZ_PYKC01000105.1	Protein Homology	CDS	4046	4606	.	+	0	ID=cds-WP_001523344.1;Parent=gene-C9F00_RS17085;Dbxref=GenBank:WP_001523344.1;Name=WP_001523344.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9F00_RS17085;product=TorD/DmsD family molecular chaperone;protein_id=WP_001523344.1;transl_table=11
NZ_PYKC01000105.1	RefSeq	gene	4599	6606	.	+	.	ID=gene-C9F00_RS17090;Name=C9F00_RS17090;end_range=6606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17090;old_locus_tag=C9F00_17515;partial=true
NZ_PYKC01000105.1	Protein Homology	CDS	4599	6606	.	+	0	ID=cds-WP_245306394.1;Parent=gene-C9F00_RS17090;Dbxref=GenBank:WP_245306394.1;Name=WP_245306394.1;Ontology_term=GO:0016491;end_range=6606,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F00_RS17090;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_245306394.1;transl_table=11
##sequence-region NZ_PYKC01000035.1 1 6343
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000035.1	RefSeq	region	1	6343	.	+	.	ID=NZ_PYKC01000035.1:1..6343;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000035.1	RefSeq	pseudogene	85	198	.	+	.	ID=gene-C9F00_RS24785;Name=C9F00_RS24785;end_range=198,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24785;partial=true;pseudo=true
NZ_PYKC01000035.1	Protein Homology	CDS	85	198	.	+	0	ID=cds-C9F00_RS24785;Parent=gene-C9F00_RS24785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=198,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019484.6;locus_tag=C9F00_RS24785;partial=true;product=DUF1656 domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000035.1	RefSeq	pseudogene	181	1533	.	-	.	ID=gene-C9F00_RS05785;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=pseudogene;locus_tag=C9F00_RS05785;old_locus_tag=C9F00_05885;partial=true;pseudo=true;start_range=.,181
NZ_PYKC01000035.1	Protein Homology	CDS	181	1533	.	-	0	ID=cds-C9F00_RS05785;Parent=gene-C9F00_RS05785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR00585.2;locus_tag=C9F00_RS05785;partial=true;product=DNA mismatch repair endonuclease MutL;pseudo=true;start_range=.,181;transl_table=11
NZ_PYKC01000035.1	RefSeq	gene	1543	2862	.	-	.	ID=gene-C9F00_RS05790;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9F00_RS05790;old_locus_tag=C9F00_05890
NZ_PYKC01000035.1	Protein Homology	CDS	1543	2862	.	-	0	ID=cds-WP_000640362.1;Parent=gene-C9F00_RS05790;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9F00_RS05790;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11
NZ_PYKC01000035.1	RefSeq	gene	2879	3340	.	-	.	ID=gene-C9F00_RS05795;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9F00_RS05795;old_locus_tag=C9F00_05895
NZ_PYKC01000035.1	Protein Homology	CDS	2879	3340	.	-	0	ID=cds-WP_000981984.1;Parent=gene-C9F00_RS05795;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9F00_RS05795;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11
NZ_PYKC01000035.1	RefSeq	gene	3312	4859	.	-	.	ID=gene-C9F00_RS05800;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9F00_RS05800;old_locus_tag=C9F00_05900
NZ_PYKC01000035.1	Protein Homology	CDS	3312	4859	.	-	0	ID=cds-WP_000968675.1;Parent=gene-C9F00_RS05800;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9F00_RS05800;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11
NZ_PYKC01000035.1	RefSeq	gene	4858	5997	.	+	.	ID=gene-C9F00_RS05805;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9F00_RS05805;old_locus_tag=C9F00_05905
NZ_PYKC01000035.1	Protein Homology	CDS	4858	5997	.	+	0	ID=cds-WP_001670426.1;Parent=gene-C9F00_RS05805;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9F00_RS05805;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11
NZ_PYKC01000035.1	RefSeq	gene	6267	6342	.	-	.	ID=gene-C9F00_RS05810;Name=C9F00_RS05810;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS05810;old_locus_tag=C9F00_05910
NZ_PYKC01000035.1	tRNAscan-SE	tRNA	6267	6342	.	-	.	ID=rna-C9F00_RS05810;Parent=gene-C9F00_RS05810;anticodon=(pos:complement(6307..6309));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS05810;product=tRNA-Gly
NZ_PYKC01000035.1	tRNAscan-SE	exon	6267	6342	.	-	.	ID=exon-C9F00_RS05810-1;Parent=rna-C9F00_RS05810;anticodon=(pos:complement(6307..6309));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS05810;product=tRNA-Gly
##sequence-region NZ_PYKC01000113.1 1 6225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000113.1	RefSeq	region	1	6225	.	+	.	ID=NZ_PYKC01000113.1:1..6225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000113.1	RefSeq	pseudogene	328	714	.	+	.	ID=gene-C9F00_RS17710;Name=C9F00_RS17710;end_range=714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17710;old_locus_tag=C9F00_18155;partial=true;pseudo=true
NZ_PYKC01000113.1	Protein Homology	CDS	328	714	.	+	0	ID=cds-C9F00_RS17710;Parent=gene-C9F00_RS17710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0016020;end_range=714,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013694.6;locus_tag=C9F00_RS17710;partial=true;product=CorA family divalent cation transporter;pseudo=true;transl_table=11
NZ_PYKC01000113.1	RefSeq	pseudogene	923	1327	.	+	.	ID=gene-C9F00_RS17720;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=pseudogene;locus_tag=C9F00_RS17720;old_locus_tag=C9F00_18165;partial=true;pseudo=true;start_range=.,923
NZ_PYKC01000113.1	Protein Homology	CDS	923	1327	.	+	0	ID=cds-C9F00_RS17720;Parent=gene-C9F00_RS17720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F00_RS17720;partial=true;product=cobalt ECF transporter S component CbiM;pseudo=true;start_range=.,923;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	1329	1610	.	+	.	ID=gene-C9F00_RS17725;Name=C9F00_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17725;old_locus_tag=C9F00_18170
NZ_PYKC01000113.1	Protein Homology	CDS	1329	1610	.	+	0	ID=cds-WP_000753216.1;Parent=gene-C9F00_RS17725;Dbxref=GenBank:WP_000753216.1;Name=WP_000753216.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9F00_RS17725;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753216.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	1597	2274	.	+	.	ID=gene-C9F00_RS17730;Name=C9F00_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17730;old_locus_tag=C9F00_18175
NZ_PYKC01000113.1	Protein Homology	CDS	1597	2274	.	+	0	ID=cds-WP_080088129.1;Parent=gene-C9F00_RS17730;Dbxref=GenBank:WP_080088129.1;Name=WP_080088129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9F00_RS17730;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_080088129.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	2283	3098	.	+	.	ID=gene-C9F00_RS17735;Name=C9F00_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17735;old_locus_tag=C9F00_18180
NZ_PYKC01000113.1	Protein Homology	CDS	2283	3098	.	+	0	ID=cds-WP_000881540.1;Parent=gene-C9F00_RS17735;Dbxref=GenBank:WP_000881540.1;Name=WP_000881540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9F00_RS17735;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881540.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	3095	4615	.	+	.	ID=gene-C9F00_RS17740;Name=C9F00_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17740;old_locus_tag=C9F00_18185
NZ_PYKC01000113.1	Protein Homology	CDS	3095	4615	.	+	0	ID=cds-WP_135369613.1;Parent=gene-C9F00_RS17740;Dbxref=GenBank:WP_135369613.1;Name=WP_135369613.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9F00_RS17740;product=cobyric acid synthase;protein_id=WP_135369613.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	4612	5157	.	+	.	ID=gene-C9F00_RS17745;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9F00_RS17745;old_locus_tag=C9F00_18190
NZ_PYKC01000113.1	Protein Homology	CDS	4612	5157	.	+	0	ID=cds-WP_000973146.1;Parent=gene-C9F00_RS17745;Dbxref=GenBank:WP_000973146.1;Name=WP_000973146.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9F00_RS17745;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973146.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	5154	5897	.	+	.	ID=gene-C9F00_RS17750;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9F00_RS17750;old_locus_tag=C9F00_18195
NZ_PYKC01000113.1	Protein Homology	CDS	5154	5897	.	+	0	ID=cds-WP_000039999.1;Parent=gene-C9F00_RS17750;Dbxref=GenBank:WP_000039999.1;Name=WP_000039999.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9F00_RS17750;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039999.1;transl_table=11
NZ_PYKC01000113.1	RefSeq	gene	5924	6225	.	+	.	ID=gene-C9F00_RS17755;Name=C9F00_RS17755;end_range=6225,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17755;old_locus_tag=C9F00_18200;partial=true
NZ_PYKC01000113.1	Protein Homology	CDS	5924	6225	.	+	0	ID=cds-WP_167850722.1;Parent=gene-C9F00_RS17755;Dbxref=GenBank:WP_167850722.1;Name=WP_167850722.1;Ontology_term=GO:0009236,GO:0008939;end_range=6225,.;gbkey=CDS;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9F00_RS17755;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_167850722.1;transl_table=11
##sequence-region NZ_PYKC01000067.1 1 6104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000067.1	RefSeq	region	1	6104	.	+	.	ID=NZ_PYKC01000067.1:1..6104;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000067.1	RefSeq	gene	1	76	.	+	.	ID=gene-C9F00_RS11385;Name=C9F00_RS11385;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS11385;old_locus_tag=C9F00_11660;partial=true;start_range=.,1
NZ_PYKC01000067.1	cmsearch	ncRNA	1	76	.	+	.	ID=rna-C9F00_RS11385;Parent=gene-C9F00_RS11385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS11385;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKC01000067.1	cmsearch	exon	1	76	.	+	.	ID=exon-C9F00_RS11385-1;Parent=rna-C9F00_RS11385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS11385;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKC01000067.1	RefSeq	gene	127	257	.	+	.	ID=gene-C9F00_RS11390;Name=C9F00_RS11390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS11390;old_locus_tag=C9F00_11665
NZ_PYKC01000067.1	cmsearch	ncRNA	127	257	.	+	.	ID=rna-C9F00_RS11390;Parent=gene-C9F00_RS11390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS11390;product=RtT sRNA
NZ_PYKC01000067.1	cmsearch	exon	127	257	.	+	.	ID=exon-C9F00_RS11390-1;Parent=rna-C9F00_RS11390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS11390;product=RtT sRNA
NZ_PYKC01000067.1	RefSeq	gene	360	1889	.	-	.	ID=gene-C9F00_RS11395;Name=C9F00_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11395;old_locus_tag=C9F00_11670
NZ_PYKC01000067.1	Protein Homology	CDS	360	1889	.	-	0	ID=cds-WP_135369435.1;Parent=gene-C9F00_RS11395;Dbxref=GenBank:WP_135369435.1;Name=WP_135369435.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9F00_RS11395;product=tetratricopeptide repeat protein;protein_id=WP_135369435.1;transl_table=11
NZ_PYKC01000067.1	RefSeq	gene	2131	2808	.	-	.	ID=gene-C9F00_RS11405;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F00_RS11405;old_locus_tag=C9F00_11680
NZ_PYKC01000067.1	Protein Homology	CDS	2131	2808	.	-	0	ID=cds-WP_000545594.1;Parent=gene-C9F00_RS11405;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9F00_RS11405;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11
NZ_PYKC01000067.1	RefSeq	gene	2808	3518	.	-	.	ID=gene-C9F00_RS11410;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9F00_RS11410;old_locus_tag=C9F00_11685
NZ_PYKC01000067.1	Protein Homology	CDS	2808	3518	.	-	0	ID=cds-WP_000571668.1;Parent=gene-C9F00_RS11410;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9F00_RS11410;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11
NZ_PYKC01000067.1	RefSeq	gene	3515	5050	.	-	.	ID=gene-C9F00_RS11415;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F00_RS11415;old_locus_tag=C9F00_11690
NZ_PYKC01000067.1	Protein Homology	CDS	3515	5050	.	-	0	ID=cds-WP_000702629.1;Parent=gene-C9F00_RS11415;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9F00_RS11415;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11
NZ_PYKC01000067.1	RefSeq	gene	5047	6104	.	-	.	ID=gene-C9F00_RS11420;Name=C9F00_RS11420;end_range=6104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11420;old_locus_tag=C9F00_11695;partial=true
NZ_PYKC01000067.1	Protein Homology	CDS	5047	6104	.	-	2	ID=cds-WP_135492299.1;Parent=gene-C9F00_RS11420;Dbxref=GenBank:WP_135492299.1;Name=WP_135492299.1;Ontology_term=GO:0016491,GO:0043546;end_range=6104,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F00_RS11420;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_135492299.1;transl_table=11
##sequence-region NZ_PYKC01000119.1 1 5857
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000119.1	RefSeq	region	1	5857	.	+	.	ID=NZ_PYKC01000119.1:1..5857;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000119.1	RefSeq	gene	1	567	.	+	.	ID=gene-C9F00_RS18345;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9F00_RS18345;old_locus_tag=C9F00_18790;partial=true;start_range=.,1
NZ_PYKC01000119.1	Protein Homology	CDS	1	567	.	+	0	ID=cds-WP_135492432.1;Parent=gene-C9F00_RS18345;Dbxref=GenBank:WP_135492432.1;Name=WP_135492432.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9F00_RS18345;partial=true;product=penicillin-binding protein activator LpoB;protein_id=WP_135492432.1;start_range=.,1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	548	1372	.	+	.	ID=gene-C9F00_RS18350;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9F00_RS18350;old_locus_tag=C9F00_18795
NZ_PYKC01000119.1	Protein Homology	CDS	548	1372	.	+	0	ID=cds-WP_135369038.1;Parent=gene-C9F00_RS18350;Dbxref=GenBank:WP_135369038.1;Name=WP_135369038.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9F00_RS18350;product=thiamine kinase;protein_id=WP_135369038.1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	1383	2408	.	+	.	ID=gene-C9F00_RS18355;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9F00_RS18355;old_locus_tag=C9F00_18800
NZ_PYKC01000119.1	Protein Homology	CDS	1383	2408	.	+	0	ID=cds-WP_000529339.1;Parent=gene-C9F00_RS18355;Dbxref=GenBank:WP_000529339.1;Name=WP_000529339.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9F00_RS18355;product=beta-N-acetylhexosaminidase;protein_id=WP_000529339.1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	2433	2975	.	+	.	ID=gene-C9F00_RS18360;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9F00_RS18360;old_locus_tag=C9F00_18805
NZ_PYKC01000119.1	Protein Homology	CDS	2433	2975	.	+	0	ID=cds-WP_000587943.1;Parent=gene-C9F00_RS18360;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9F00_RS18360;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	3230	4534	.	+	.	ID=gene-C9F00_RS18365;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9F00_RS18365;old_locus_tag=C9F00_18810
NZ_PYKC01000119.1	Protein Homology	CDS	3230	4534	.	+	0	ID=cds-WP_000211053.1;Parent=gene-C9F00_RS18365;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9F00_RS18365;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	4711	5250	.	+	.	ID=gene-C9F00_RS18370;Name=C9F00_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18370;old_locus_tag=C9F00_18815
NZ_PYKC01000119.1	Protein Homology	CDS	4711	5250	.	+	0	ID=cds-WP_001043449.1;Parent=gene-C9F00_RS18370;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9F00_RS18370;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11
NZ_PYKC01000119.1	RefSeq	gene	5324	5857	.	-	.	ID=gene-C9F00_RS18375;Name=C9F00_RS18375;end_range=5857,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18375;old_locus_tag=C9F00_18820;partial=true
NZ_PYKC01000119.1	Protein Homology	CDS	5324	5857	.	-	0	ID=cds-WP_135492434.1;Parent=gene-C9F00_RS18375;Dbxref=GenBank:WP_135492434.1;Name=WP_135492434.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=5857,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=C9F00_RS18375;partial=true;product=TetR/AcrR family transcriptional regulator;protein_id=WP_135492434.1;transl_table=11
##sequence-region NZ_PYKC01000103.1 1 79798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000103.1	RefSeq	region	1	79798	.	+	.	ID=NZ_PYKC01000103.1:1..79798;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000103.1	RefSeq	gene	1	1264	.	-	.	ID=gene-C9F00_RS16725;Name=C9F00_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16725;old_locus_tag=C9F00_17130;partial=true;start_range=.,1
NZ_PYKC01000103.1	Protein Homology	CDS	1	1264	.	-	0	ID=cds-WP_135492400.1;Parent=gene-C9F00_RS16725;Dbxref=GenBank:WP_135492400.1;Name=WP_135492400.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9F00_RS16725;partial=true;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_135492400.1;start_range=.,1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	1261	1740	.	-	.	ID=gene-C9F00_RS16730;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9F00_RS16730;old_locus_tag=C9F00_17135
NZ_PYKC01000103.1	Protein Homology	CDS	1261	1740	.	-	0	ID=cds-WP_001053600.1;Parent=gene-C9F00_RS16730;Dbxref=GenBank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9F00_RS16730;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	1737	1949	.	-	.	ID=gene-C9F00_RS16735;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9F00_RS16735;old_locus_tag=C9F00_17140
NZ_PYKC01000103.1	Protein Homology	CDS	1737	1949	.	-	0	ID=cds-WP_000074110.1;Parent=gene-C9F00_RS16735;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9F00_RS16735;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	1946	2683	.	-	.	ID=gene-C9F00_RS16740;Name=C9F00_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16740;old_locus_tag=C9F00_17145
NZ_PYKC01000103.1	Protein Homology	CDS	1946	2683	.	-	0	ID=cds-WP_000265995.1;Parent=gene-C9F00_RS16740;Dbxref=GenBank:WP_000265995.1;Name=WP_000265995.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9F00_RS16740;product=heme ABC transporter permease;protein_id=WP_000265995.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	2735	3394	.	-	.	ID=gene-C9F00_RS16745;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9F00_RS16745;old_locus_tag=C9F00_17150
NZ_PYKC01000103.1	Protein Homology	CDS	2735	3394	.	-	0	ID=cds-WP_020838447.1;Parent=gene-C9F00_RS16745;Dbxref=GenBank:WP_020838447.1;Name=WP_020838447.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9F00_RS16745;product=heme exporter protein CcmB;protein_id=WP_020838447.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	3391	4008	.	-	.	ID=gene-C9F00_RS16750;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9F00_RS16750;old_locus_tag=C9F00_17155
NZ_PYKC01000103.1	Protein Homology	CDS	3391	4008	.	-	0	ID=cds-WP_000888526.1;Parent=gene-C9F00_RS16750;Dbxref=GenBank:WP_000888526.1;Name=WP_000888526.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F00_RS16750;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888526.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	4029	4631	.	-	.	ID=gene-C9F00_RS16755;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9F00_RS16755;old_locus_tag=C9F00_17160
NZ_PYKC01000103.1	Protein Homology	CDS	4029	4631	.	-	0	ID=cds-WP_000431778.1;Parent=gene-C9F00_RS16755;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9F00_RS16755;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	4641	5090	.	-	.	ID=gene-C9F00_RS16760;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9F00_RS16760;old_locus_tag=C9F00_17165
NZ_PYKC01000103.1	Protein Homology	CDS	4641	5090	.	-	0	ID=cds-WP_000835182.1;Parent=gene-C9F00_RS16760;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9F00_RS16760;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	5206	6075	.	-	.	ID=gene-C9F00_RS16765;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9F00_RS16765;old_locus_tag=C9F00_17175
NZ_PYKC01000103.1	Protein Homology	CDS	5206	6075	.	-	0	ID=cds-WP_135369222.1;Parent=gene-C9F00_RS16765;Dbxref=GenBank:WP_135369222.1;Name=WP_135369222.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9F00_RS16765;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_135369222.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	6062	6757	.	-	.	ID=gene-C9F00_RS16770;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9F00_RS16770;old_locus_tag=C9F00_17180
NZ_PYKC01000103.1	Protein Homology	CDS	6062	6757	.	-	0	ID=cds-WP_000091673.1;Parent=gene-C9F00_RS16770;Dbxref=GenBank:WP_000091673.1;Name=WP_000091673.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9F00_RS16770;product=ferredoxin-type protein NapG;protein_id=WP_000091673.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	6764	9250	.	-	.	ID=gene-C9F00_RS16775;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9F00_RS16775;old_locus_tag=C9F00_17185
NZ_PYKC01000103.1	Protein Homology	CDS	6764	9250	.	-	0	ID=cds-WP_135492402.1;Parent=gene-C9F00_RS16775;Dbxref=GenBank:WP_135492402.1;Name=WP_135492402.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9F00_RS16775;product=nitrate reductase catalytic subunit NapA;protein_id=WP_135492402.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	9247	9510	.	-	.	ID=gene-C9F00_RS16780;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9F00_RS16780;old_locus_tag=C9F00_17190
NZ_PYKC01000103.1	Protein Homology	CDS	9247	9510	.	-	0	ID=cds-WP_001260058.1;Parent=gene-C9F00_RS16780;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9F00_RS16780;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	9500	9991	.	-	.	ID=gene-C9F00_RS16785;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9F00_RS16785;old_locus_tag=C9F00_17195
NZ_PYKC01000103.1	Protein Homology	CDS	9500	9991	.	-	0	ID=cds-WP_000228066.1;Parent=gene-C9F00_RS16785;Dbxref=GenBank:WP_000228066.1;Name=WP_000228066.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9F00_RS16785;product=ferredoxin-type protein NapF;protein_id=WP_000228066.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	10405	10899	.	+	.	ID=gene-C9F00_RS16790;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9F00_RS16790;old_locus_tag=C9F00_17200
NZ_PYKC01000103.1	Protein Homology	CDS	10405	10899	.	+	0	ID=cds-WP_135369555.1;Parent=gene-C9F00_RS16790;Dbxref=GenBank:WP_135369555.1;Name=WP_135369555.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9F00_RS16790;product=serine protease inhibitor ecotin;protein_id=WP_135369555.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	11099	12742	.	-	.	ID=gene-C9F00_RS16795;Name=C9F00_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16795;old_locus_tag=C9F00_17205
NZ_PYKC01000103.1	Protein Homology	CDS	11099	12742	.	-	0	ID=cds-WP_135369554.1;Parent=gene-C9F00_RS16795;Dbxref=GenBank:WP_135369554.1;Name=WP_135369554.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F00_RS16795;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_135369554.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	12818	13468	.	-	.	ID=gene-C9F00_RS16800;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=C9F00_RS16800;old_locus_tag=C9F00_17210
NZ_PYKC01000103.1	Protein Homology	CDS	12818	13468	.	-	0	ID=cds-WP_000884991.1;Parent=gene-C9F00_RS16800;Dbxref=GenBank:WP_000884991.1;Name=WP_000884991.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9F00_RS16800;product=DNA oxidative demethylase AlkB;protein_id=WP_000884991.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	13471	14532	.	-	.	ID=gene-C9F00_RS16805;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9F00_RS16805;old_locus_tag=C9F00_17215
NZ_PYKC01000103.1	Protein Homology	CDS	13471	14532	.	-	0	ID=cds-WP_047605511.1;Parent=gene-C9F00_RS16805;Dbxref=GenBank:WP_047605511.1;Name=WP_047605511.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9F00_RS16805;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_047605511.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	14613	15665	.	-	.	ID=gene-C9F00_RS16810;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9F00_RS16810;old_locus_tag=C9F00_17220
NZ_PYKC01000103.1	Protein Homology	CDS	14613	15665	.	-	0	ID=cds-WP_000784304.1;Parent=gene-C9F00_RS16810;Dbxref=GenBank:WP_000784304.1;Name=WP_000784304.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9F00_RS16810;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784304.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	15780	16916	.	-	.	ID=gene-C9F00_RS16815;Name=C9F00_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16815;old_locus_tag=C9F00_17225
NZ_PYKC01000103.1	Protein Homology	CDS	15780	16916	.	-	0	ID=cds-WP_000865521.1;Parent=gene-C9F00_RS16815;Dbxref=GenBank:WP_000865521.1;Name=WP_000865521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9F00_RS16815;product=porin OmpC;protein_id=WP_000865521.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	17645	20314	.	+	.	ID=gene-C9F00_RS16820;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9F00_RS16820;old_locus_tag=C9F00_17235
NZ_PYKC01000103.1	Protein Homology	CDS	17645	20314	.	+	0	ID=cds-WP_135369377.1;Parent=gene-C9F00_RS16820;Dbxref=GenBank:WP_135369377.1;Name=WP_135369377.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F00_RS16820;product=phosphotransferase RcsD;protein_id=WP_135369377.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	20331	20981	.	+	.	ID=gene-C9F00_RS16825;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9F00_RS16825;old_locus_tag=C9F00_17240
NZ_PYKC01000103.1	Protein Homology	CDS	20331	20981	.	+	0	ID=cds-WP_001061919.1;Parent=gene-C9F00_RS16825;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9F00_RS16825;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	21084	23930	.	-	.	ID=gene-C9F00_RS16830;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=C9F00_RS16830;old_locus_tag=C9F00_17245
NZ_PYKC01000103.1	Protein Homology	CDS	21084	23930	.	-	0	ID=cds-WP_000876075.1;Parent=gene-C9F00_RS16830;Dbxref=GenBank:WP_000876075.1;Name=WP_000876075.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9F00_RS16830;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876075.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	24048	26684	.	-	.	ID=gene-C9F00_RS16835;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9F00_RS16835;old_locus_tag=C9F00_17250
NZ_PYKC01000103.1	Protein Homology	CDS	24048	26684	.	-	0	ID=cds-WP_001281271.1;Parent=gene-C9F00_RS16835;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F00_RS16835;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	27094	28296	.	-	.	ID=gene-C9F00_RS16840;Name=C9F00_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16840;old_locus_tag=C9F00_17260
NZ_PYKC01000103.1	Protein Homology	CDS	27094	28296	.	-	0	ID=cds-WP_135492404.1;Parent=gene-C9F00_RS16840;Dbxref=GenBank:WP_135492404.1;Name=WP_135492404.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9F00_RS16840;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_135492404.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	28311	29636	.	-	.	ID=gene-C9F00_RS16845;Name=C9F00_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16845;old_locus_tag=C9F00_17265
NZ_PYKC01000103.1	Protein Homology	CDS	28311	29636	.	-	0	ID=cds-WP_000098078.1;Parent=gene-C9F00_RS16845;Dbxref=GenBank:WP_000098078.1;Name=WP_000098078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F00_RS16845;product=MFS transporter;protein_id=WP_000098078.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	29686	30570	.	+	.	ID=gene-C9F00_RS16850;Name=C9F00_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16850;old_locus_tag=C9F00_17270
NZ_PYKC01000103.1	Protein Homology	CDS	29686	30570	.	+	0	ID=cds-WP_135369375.1;Parent=gene-C9F00_RS16850;Dbxref=GenBank:WP_135369375.1;Name=WP_135369375.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9F00_RS16850;product=GntR family transcriptional regulator;protein_id=WP_135369375.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	30653	31381	.	+	.	ID=gene-C9F00_RS16855;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9F00_RS16855;old_locus_tag=C9F00_17275
NZ_PYKC01000103.1	Protein Homology	CDS	30653	31381	.	+	0	ID=cds-WP_001091009.1;Parent=gene-C9F00_RS16855;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9F00_RS16855;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	31737	34022	.	+	.	ID=gene-C9F00_RS16860;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9F00_RS16860;old_locus_tag=C9F00_17280
NZ_PYKC01000103.1	Protein Homology	CDS	31737	34022	.	+	0	ID=cds-WP_001076487.1;Parent=gene-C9F00_RS16860;Dbxref=GenBank:WP_001076487.1;Name=WP_001076487.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F00_RS16860;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076487.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	34135	35265	.	+	.	ID=gene-C9F00_RS16865;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9F00_RS16865;old_locus_tag=C9F00_17285
NZ_PYKC01000103.1	Protein Homology	CDS	34135	35265	.	+	0	ID=cds-WP_000332026.1;Parent=gene-C9F00_RS16865;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9F00_RS16865;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	35265	35519	.	+	.	ID=gene-C9F00_RS16870;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9F00_RS16870;old_locus_tag=C9F00_17290
NZ_PYKC01000103.1	Protein Homology	CDS	35265	35519	.	+	0	ID=cds-WP_000533921.1;Parent=gene-C9F00_RS16870;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9F00_RS16870;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	35521	36711	.	-	.	ID=gene-C9F00_RS16875;Name=C9F00_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16875;old_locus_tag=C9F00_17295
NZ_PYKC01000103.1	Protein Homology	CDS	35521	36711	.	-	0	ID=cds-WP_023205619.1;Parent=gene-C9F00_RS16875;Dbxref=GenBank:WP_023205619.1;Name=WP_023205619.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9F00_RS16875;product=MFS transporter;protein_id=WP_023205619.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	36873	37751	.	+	.	ID=gene-C9F00_RS16880;Name=C9F00_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16880;old_locus_tag=C9F00_17300
NZ_PYKC01000103.1	Protein Homology	CDS	36873	37751	.	+	0	ID=cds-WP_000176719.1;Parent=gene-C9F00_RS16880;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9F00_RS16880;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	37867	38937	.	-	.	ID=gene-C9F00_RS16885;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9F00_RS16885;old_locus_tag=C9F00_17305
NZ_PYKC01000103.1	Protein Homology	CDS	37867	38937	.	-	0	ID=cds-WP_000858952.1;Parent=gene-C9F00_RS16885;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9F00_RS16885;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	38942	40300	.	-	.	ID=gene-C9F00_RS16890;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9F00_RS16890;old_locus_tag=C9F00_17310
NZ_PYKC01000103.1	Protein Homology	CDS	38942	40300	.	-	0	ID=cds-WP_000948739.1;Parent=gene-C9F00_RS16890;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9F00_RS16890;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	40573	42201	.	+	.	ID=gene-C9F00_RS16895;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9F00_RS16895;old_locus_tag=C9F00_17315
NZ_PYKC01000103.1	Protein Homology	CDS	40573	42201	.	+	0	ID=cds-WP_000857205.1;Parent=gene-C9F00_RS16895;Dbxref=GenBank:WP_000857205.1;Name=WP_000857205.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9F00_RS16895;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857205.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	42191	43450	.	+	.	ID=gene-C9F00_RS16900;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9F00_RS16900;old_locus_tag=C9F00_17320
NZ_PYKC01000103.1	Protein Homology	CDS	42191	43450	.	+	0	ID=cds-WP_000667148.1;Parent=gene-C9F00_RS16900;Dbxref=GenBank:WP_000667148.1;Name=WP_000667148.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9F00_RS16900;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667148.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	43447	44637	.	+	.	ID=gene-C9F00_RS16905;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9F00_RS16905;old_locus_tag=C9F00_17325
NZ_PYKC01000103.1	Protein Homology	CDS	43447	44637	.	+	0	ID=cds-WP_001285724.1;Parent=gene-C9F00_RS16905;Dbxref=GenBank:WP_001285724.1;Name=WP_001285724.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9F00_RS16905;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285724.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	45063	46085	.	+	.	ID=gene-C9F00_RS16915;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9F00_RS16915;old_locus_tag=C9F00_17335
NZ_PYKC01000103.1	Protein Homology	CDS	45063	46085	.	+	0	ID=cds-WP_135420231.1;Parent=gene-C9F00_RS16915;Dbxref=GenBank:WP_135420231.1;Name=WP_135420231.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9F00_RS16915;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_135420231.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	46319	46495	.	-	.	ID=gene-C9F00_RS16920;Name=C9F00_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16920;old_locus_tag=C9F00_17345
NZ_PYKC01000103.1	Protein Homology	CDS	46319	46495	.	-	0	ID=cds-WP_023203574.1;Parent=gene-C9F00_RS16920;Dbxref=GenBank:WP_023203574.1;Name=WP_023203574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9F00_RS16920;product=competence damage-inducible protein A;protein_id=WP_023203574.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	46501	47304	.	-	.	ID=gene-C9F00_RS16925;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9F00_RS16925;old_locus_tag=C9F00_17350
NZ_PYKC01000103.1	Protein Homology	CDS	46501	47304	.	-	0	ID=cds-WP_000992941.1;Parent=gene-C9F00_RS16925;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9F00_RS16925;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	47330	48619	.	-	.	ID=gene-C9F00_RS16930;Name=C9F00_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16930;old_locus_tag=C9F00_17355
NZ_PYKC01000103.1	Protein Homology	CDS	47330	48619	.	-	0	ID=cds-WP_000028931.1;Parent=gene-C9F00_RS16930;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9F00_RS16930;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	48675	49880	.	-	.	ID=gene-C9F00_RS16935;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=C9F00_RS16935;old_locus_tag=C9F00_17360
NZ_PYKC01000103.1	Protein Homology	CDS	48675	49880	.	-	0	ID=cds-WP_001530644.1;Parent=gene-C9F00_RS16935;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9F00_RS16935;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	49894	50676	.	-	.	ID=gene-C9F00_RS16940;Name=C9F00_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16940;old_locus_tag=C9F00_17365
NZ_PYKC01000103.1	Protein Homology	CDS	49894	50676	.	-	0	ID=cds-WP_114050950.1;Parent=gene-C9F00_RS16940;Dbxref=GenBank:WP_114050950.1;Name=WP_114050950.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9F00_RS16940;product=IclR family transcriptional regulator;protein_id=WP_114050950.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	50926	52122	.	-	.	ID=gene-C9F00_RS16945;Name=C9F00_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16945;old_locus_tag=C9F00_17370
NZ_PYKC01000103.1	Protein Homology	CDS	50926	52122	.	-	0	ID=cds-WP_000935683.1;Parent=gene-C9F00_RS16945;Dbxref=GenBank:WP_000935683.1;Name=WP_000935683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9F00_RS16945;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935683.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	52237	52779	.	-	.	ID=gene-C9F00_RS16950;Name=C9F00_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16950;old_locus_tag=C9F00_17375
NZ_PYKC01000103.1	Protein Homology	CDS	52237	52779	.	-	0	ID=cds-WP_001670658.1;Parent=gene-C9F00_RS16950;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9F00_RS16950;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	53058	53483	.	+	.	ID=gene-C9F00_RS16955;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9F00_RS16955;old_locus_tag=C9F00_17380
NZ_PYKC01000103.1	Protein Homology	CDS	53058	53483	.	+	0	ID=cds-WP_001249900.1;Parent=gene-C9F00_RS16955;Dbxref=GenBank:WP_001249900.1;Name=WP_001249900.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9F00_RS16955;product=nucleoside triphosphatase NudI;protein_id=WP_001249900.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	53528	54133	.	-	.	ID=gene-C9F00_RS16960;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9F00_RS16960;old_locus_tag=C9F00_17385
NZ_PYKC01000103.1	Protein Homology	CDS	53528	54133	.	-	0	ID=cds-WP_000879258.1;Parent=gene-C9F00_RS16960;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9F00_RS16960;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	54432	55571	.	+	.	ID=gene-C9F00_RS16965;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9F00_RS16965;old_locus_tag=C9F00_17390
NZ_PYKC01000103.1	Protein Homology	CDS	54432	55571	.	+	0	ID=cds-WP_135369264.1;Parent=gene-C9F00_RS16965;Dbxref=GenBank:WP_135369264.1;Name=WP_135369264.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9F00_RS16965;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_135369264.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	55574	56557	.	+	.	ID=gene-C9F00_RS16970;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9F00_RS16970;old_locus_tag=C9F00_17395
NZ_PYKC01000103.1	Protein Homology	CDS	55574	56557	.	+	0	ID=cds-WP_000458893.1;Parent=gene-C9F00_RS16970;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9F00_RS16970;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	56554	58536	.	+	.	ID=gene-C9F00_RS16975;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9F00_RS16975;old_locus_tag=C9F00_17400
NZ_PYKC01000103.1	Protein Homology	CDS	56554	58536	.	+	0	ID=cds-WP_064047212.1;Parent=gene-C9F00_RS16975;Dbxref=GenBank:WP_064047212.1;Name=WP_064047212.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9F00_RS16975;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_064047212.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	58533	59432	.	+	.	ID=gene-C9F00_RS16980;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9F00_RS16980;old_locus_tag=C9F00_17405
NZ_PYKC01000103.1	Protein Homology	CDS	58533	59432	.	+	0	ID=cds-WP_000169760.1;Parent=gene-C9F00_RS16980;Dbxref=GenBank:WP_000169760.1;Name=WP_000169760.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9F00_RS16980;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169760.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	59429	61075	.	+	.	ID=gene-C9F00_RS16985;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9F00_RS16985;old_locus_tag=C9F00_17410
NZ_PYKC01000103.1	Protein Homology	CDS	59429	61075	.	+	0	ID=cds-WP_135369263.1;Parent=gene-C9F00_RS16985;Dbxref=GenBank:WP_135369263.1;Name=WP_135369263.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9F00_RS16985;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_135369263.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	61072	61407	.	+	.	ID=gene-C9F00_RS16990;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9F00_RS16990;old_locus_tag=C9F00_17415
NZ_PYKC01000103.1	Protein Homology	CDS	61072	61407	.	+	0	ID=cds-WP_000580688.1;Parent=gene-C9F00_RS16990;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9F00_RS16990;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	61407	61784	.	+	.	ID=gene-C9F00_RS16995;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=C9F00_RS16995;old_locus_tag=C9F00_17420
NZ_PYKC01000103.1	Protein Homology	CDS	61407	61784	.	+	0	ID=cds-WP_000538694.1;Parent=gene-C9F00_RS16995;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9F00_RS16995;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	61779	62036	.	-	.	ID=gene-C9F00_RS17000;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9F00_RS17000;old_locus_tag=C9F00_17425
NZ_PYKC01000103.1	Protein Homology	CDS	61779	62036	.	-	0	ID=cds-WP_000455132.1;Parent=gene-C9F00_RS17000;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9F00_RS17000;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	62134	63501	.	-	.	ID=gene-C9F00_RS17005;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9F00_RS17005;old_locus_tag=C9F00_17430
NZ_PYKC01000103.1	Protein Homology	CDS	62134	63501	.	-	0	ID=cds-WP_001749042.1;Parent=gene-C9F00_RS17005;Dbxref=GenBank:WP_001749042.1;Name=WP_001749042.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9F00_RS17005;product=o-succinylbenzoate--CoA ligase;protein_id=WP_001749042.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	63498	64460	.	-	.	ID=gene-C9F00_RS17010;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9F00_RS17010;old_locus_tag=C9F00_17435
NZ_PYKC01000103.1	Protein Homology	CDS	63498	64460	.	-	0	ID=cds-WP_001255557.1;Parent=gene-C9F00_RS17010;Dbxref=GenBank:WP_001255557.1;Name=WP_001255557.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9F00_RS17010;product=o-succinylbenzoate synthase;protein_id=WP_001255557.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	64460	65317	.	-	.	ID=gene-C9F00_RS17015;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9F00_RS17015;old_locus_tag=C9F00_17440
NZ_PYKC01000103.1	Protein Homology	CDS	64460	65317	.	-	0	ID=cds-WP_000640013.1;Parent=gene-C9F00_RS17015;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9F00_RS17015;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	65332	66090	.	-	.	ID=gene-C9F00_RS17020;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=C9F00_RS17020;old_locus_tag=C9F00_17445
NZ_PYKC01000103.1	Protein Homology	CDS	65332	66090	.	-	0	ID=cds-WP_135369262.1;Parent=gene-C9F00_RS17020;Dbxref=GenBank:WP_135369262.1;Name=WP_135369262.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9F00_RS17020;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_135369262.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	66087	67757	.	-	.	ID=gene-C9F00_RS17025;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9F00_RS17025;old_locus_tag=C9F00_17450
NZ_PYKC01000103.1	Protein Homology	CDS	66087	67757	.	-	0	ID=cds-WP_135369261.1;Parent=gene-C9F00_RS17025;Dbxref=GenBank:WP_135369261.1;Name=WP_135369261.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9F00_RS17025;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_135369261.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	67843	69138	.	-	.	ID=gene-C9F00_RS17030;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9F00_RS17030;old_locus_tag=C9F00_17455
NZ_PYKC01000103.1	Protein Homology	CDS	67843	69138	.	-	0	ID=cds-WP_000555672.1;Parent=gene-C9F00_RS17030;Dbxref=GenBank:WP_000555672.1;Name=WP_000555672.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9F00_RS17030;product=isochorismate synthase MenF;protein_id=WP_000555672.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	69239	69544	.	-	.	ID=gene-C9F00_RS17035;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9F00_RS17035;old_locus_tag=C9F00_17460
NZ_PYKC01000103.1	Protein Homology	CDS	69239	69544	.	-	0	ID=cds-WP_001519663.1;Parent=gene-C9F00_RS17035;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9F00_RS17035;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	69599	70060	.	-	.	ID=gene-C9F00_RS17040;Name=C9F00_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17040;old_locus_tag=C9F00_17465
NZ_PYKC01000103.1	Protein Homology	CDS	69599	70060	.	-	0	ID=cds-WP_000568155.1;Parent=gene-C9F00_RS17040;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9F00_RS17040;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	70121	71038	.	+	.	ID=gene-C9F00_RS17045;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9F00_RS17045;old_locus_tag=C9F00_17470
NZ_PYKC01000103.1	Protein Homology	CDS	70121	71038	.	+	0	ID=cds-WP_000419093.1;Parent=gene-C9F00_RS17045;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9F00_RS17045;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	71104	72105	.	+	.	ID=gene-C9F00_RS17050;Name=C9F00_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17050;old_locus_tag=C9F00_17475
NZ_PYKC01000103.1	Protein Homology	CDS	71104	72105	.	+	0	ID=cds-WP_000368560.1;Parent=gene-C9F00_RS17050;Dbxref=GenBank:WP_000368560.1;Name=WP_000368560.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9F00_RS17050;product=chemotaxis protein;protein_id=WP_000368560.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	72146	73927	.	-	.	ID=gene-C9F00_RS17055;Name=C9F00_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17055;old_locus_tag=C9F00_17480
NZ_PYKC01000103.1	Protein Homology	CDS	72146	73927	.	-	0	ID=cds-WP_135369260.1;Parent=gene-C9F00_RS17055;Dbxref=GenBank:WP_135369260.1;Name=WP_135369260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9F00_RS17055;product=vWA domain-containing protein;protein_id=WP_135369260.1;transl_table=11
NZ_PYKC01000103.1	RefSeq	gene	74646	79798	.	-	.	ID=gene-C9F00_RS17060;Name=C9F00_RS17060;end_range=79798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17060;old_locus_tag=C9F00_17485;partial=true
NZ_PYKC01000103.1	Protein Homology	CDS	74646	79798	.	-	2	ID=cds-WP_135492406.1;Parent=gene-C9F00_RS17060;Dbxref=GenBank:WP_135492406.1;Name=WP_135492406.1;Ontology_term=GO:0019867;end_range=79798,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747458.1;locus_tag=C9F00_RS17060;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135492406.1;transl_table=11
##sequence-region NZ_PYKC01000136.1 1 5341
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000136.1	RefSeq	region	1	5341	.	+	.	ID=NZ_PYKC01000136.1:1..5341;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000136.1	RefSeq	gene	1	372	.	-	.	ID=gene-C9F00_RS20470;Name=C9F00_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20470;old_locus_tag=C9F00_20940;partial=true;start_range=.,1
NZ_PYKC01000136.1	Protein Homology	CDS	1	372	.	-	0	ID=cds-WP_135492480.1;Parent=gene-C9F00_RS20470;Dbxref=GenBank:WP_135492480.1;Name=WP_135492480.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9F00_RS20470;partial=true;product=GTPase;protein_id=WP_135492480.1;start_range=.,1;transl_table=11
NZ_PYKC01000136.1	RefSeq	gene	489	1667	.	-	.	ID=gene-C9F00_RS20475;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9F00_RS20475;old_locus_tag=C9F00_20945
NZ_PYKC01000136.1	Protein Homology	CDS	489	1667	.	-	0	ID=cds-WP_135369740.1;Parent=gene-C9F00_RS20475;Dbxref=GenBank:WP_135369740.1;Name=WP_135369740.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9F00_RS20475;product=outer membrane protein assembly factor BamB;protein_id=WP_135369740.1;transl_table=11
NZ_PYKC01000136.1	RefSeq	gene	1678	2298	.	-	.	ID=gene-C9F00_RS20480;Name=C9F00_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20480;old_locus_tag=C9F00_20950
NZ_PYKC01000136.1	Protein Homology	CDS	1678	2298	.	-	0	ID=cds-WP_000409190.1;Parent=gene-C9F00_RS20480;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9F00_RS20480;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11
NZ_PYKC01000136.1	RefSeq	gene	2312	3586	.	-	.	ID=gene-C9F00_RS20485;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9F00_RS20485;old_locus_tag=C9F00_20955
NZ_PYKC01000136.1	Protein Homology	CDS	2312	3586	.	-	0	ID=cds-WP_001107139.1;Parent=gene-C9F00_RS20485;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9F00_RS20485;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11
NZ_PYKC01000136.1	RefSeq	gene	3697	4815	.	-	.	ID=gene-C9F00_RS20490;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9F00_RS20490;old_locus_tag=C9F00_20960
NZ_PYKC01000136.1	Protein Homology	CDS	3697	4815	.	-	0	ID=cds-WP_000551804.1;Parent=gene-C9F00_RS20490;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9F00_RS20490;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11
NZ_PYKC01000136.1	RefSeq	gene	4842	5341	.	-	.	ID=gene-C9F00_RS20495;Name=rodZ;end_range=5341,.;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9F00_RS20495;old_locus_tag=C9F00_20965;partial=true
NZ_PYKC01000136.1	Protein Homology	CDS	4842	5341	.	-	2	ID=cds-WP_135492482.1;Parent=gene-C9F00_RS20495;Dbxref=GenBank:WP_135492482.1;Name=WP_135492482.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;end_range=5341,.;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9F00_RS20495;partial=true;product=cytoskeleton protein RodZ;protein_id=WP_135492482.1;transl_table=11
##sequence-region NZ_PYKC01000167.1 1 4810
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000167.1	RefSeq	region	1	4810	.	+	.	ID=NZ_PYKC01000167.1:1..4810;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000167.1	RefSeq	gene	1	1660	.	-	.	ID=gene-C9F00_RS23515;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F00_RS23515;old_locus_tag=C9F00_24055;partial=true;start_range=.,1
NZ_PYKC01000167.1	Protein Homology	CDS	1	1660	.	-	0	ID=cds-WP_135492561.1;Parent=gene-C9F00_RS23515;Dbxref=GenBank:WP_135492561.1;Name=WP_135492561.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F00_RS23515;partial=true;product=ferrioxamine B receptor FoxA;protein_id=WP_135492561.1;start_range=.,1;transl_table=11
NZ_PYKC01000167.1	RefSeq	gene	1806	2810	.	-	.	ID=gene-C9F00_RS23520;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=C9F00_RS23520;old_locus_tag=C9F00_24060
NZ_PYKC01000167.1	Protein Homology	CDS	1806	2810	.	-	0	ID=cds-WP_000074605.1;Parent=gene-C9F00_RS23520;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9F00_RS23520;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11
NZ_PYKC01000167.1	RefSeq	gene	2906	3097	.	-	.	ID=gene-C9F00_RS24605;Name=C9F00_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24605
NZ_PYKC01000167.1	Protein Homology	CDS	2906	3097	.	-	0	ID=cds-WP_229023495.1;Parent=gene-C9F00_RS24605;Dbxref=GenBank:WP_229023495.1;Name=WP_229023495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=C9F00_RS24605;product=hypothetical protein;protein_id=WP_229023495.1;transl_table=11
NZ_PYKC01000167.1	RefSeq	gene	3016	3201	.	-	.	ID=gene-C9F00_RS24740;Name=C9F00_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24740;old_locus_tag=C9F00_24065
NZ_PYKC01000167.1	Protein Homology	CDS	3016	3201	.	-	0	ID=cds-WP_305954967.1;Parent=gene-C9F00_RS24740;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=C9F00_RS24740;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11
NZ_PYKC01000167.1	RefSeq	pseudogene	3147	3914	.	-	.	ID=gene-C9F00_RS23530;Name=C9F00_RS23530;end_range=3914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23530;old_locus_tag=C9F00_24070;partial=true;pseudo=true
NZ_PYKC01000167.1	Protein Homology	CDS	3147	3914	.	-	0	ID=cds-C9F00_RS23530;Parent=gene-C9F00_RS23530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;end_range=3914,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9F00_RS23530;partial=true;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11
NZ_PYKC01000167.1	RefSeq	pseudogene	3970	4083	.	+	.	ID=gene-C9F00_RS24930;Name=C9F00_RS24930;end_range=4083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24930;partial=true;pseudo=true
NZ_PYKC01000167.1	Protein Homology	CDS	3970	4083	.	+	0	ID=cds-C9F00_RS24930;Parent=gene-C9F00_RS24930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4083,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024544.6;locus_tag=C9F00_RS24930;partial=true;product=flagella basal body P-ring formation protein FlgA;pseudo=true;transl_table=11
NZ_PYKC01000167.1	RefSeq	gene	4245	4655	.	-	.	ID=gene-C9F00_RS23540;Name=C9F00_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23540;old_locus_tag=C9F00_24080
NZ_PYKC01000167.1	Protein Homology	CDS	4245	4655	.	-	0	ID=cds-WP_210114170.1;Parent=gene-C9F00_RS23540;Dbxref=GenBank:WP_210114170.1;Name=WP_210114170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026968.6;locus_tag=C9F00_RS23540;product=ATP-grasp domain-containing protein;protein_id=WP_210114170.1;transl_table=11
##sequence-region NZ_PYKC01000065.1 1 4735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000065.1	RefSeq	region	1	4735	.	+	.	ID=NZ_PYKC01000065.1:1..4735;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000065.1	RefSeq	pseudogene	1	250	.	+	.	ID=gene-C9F00_RS11350;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=pseudogene;locus_tag=C9F00_RS11350;old_locus_tag=C9F00_11625;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000065.1	Protein Homology	CDS	1	250	.	+	1	ID=cds-C9F00_RS11350;Parent=gene-C9F00_RS11350;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9F00_RS11350;partial=true;product=ADP compounds hydrolase NudE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000065.1	RefSeq	gene	346	2898	.	-	.	ID=gene-C9F00_RS11355;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9F00_RS11355;old_locus_tag=C9F00_11630
NZ_PYKC01000065.1	Protein Homology	CDS	346	2898	.	-	0	ID=cds-WP_000673819.1;Parent=gene-C9F00_RS11355;Dbxref=GenBank:WP_000673819.1;Name=WP_000673819.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9F00_RS11355;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673819.1;transl_table=11
NZ_PYKC01000065.1	RefSeq	gene	3019	3798	.	+	.	ID=gene-C9F00_RS11360;Name=C9F00_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11360;old_locus_tag=C9F00_11635
NZ_PYKC01000065.1	Protein Homology	CDS	3019	3798	.	+	0	ID=cds-WP_135369361.1;Parent=gene-C9F00_RS11360;Dbxref=GenBank:WP_135369361.1;Name=WP_135369361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9F00_RS11360;product=DNA utilization protein HofM;protein_id=WP_135369361.1;transl_table=11
NZ_PYKC01000065.1	RefSeq	gene	3798	4337	.	+	.	ID=gene-C9F00_RS11365;Name=C9F00_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11365;old_locus_tag=C9F00_11640
NZ_PYKC01000065.1	Protein Homology	CDS	3798	4337	.	+	0	ID=cds-WP_000951390.1;Parent=gene-C9F00_RS11365;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9F00_RS11365;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11
NZ_PYKC01000065.1	RefSeq	gene	4321	4735	.	+	.	ID=gene-C9F00_RS11370;Name=C9F00_RS11370;end_range=4735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11370;old_locus_tag=C9F00_11645;partial=true
NZ_PYKC01000065.1	Protein Homology	CDS	4321	4735	.	+	0	ID=cds-WP_135492295.1;Parent=gene-C9F00_RS11370;Dbxref=GenBank:WP_135492295.1;Name=WP_135492295.1;end_range=4735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9F00_RS11370;partial=true;product=hypothetical protein;protein_id=WP_135492295.1;transl_table=11
##sequence-region NZ_PYKC01000171.1 1 998
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000171.1	RefSeq	region	1	998	.	+	.	ID=NZ_PYKC01000171.1:1..998;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000171.1	RefSeq	gene	1	256	.	+	.	ID=gene-C9F00_RS24260;Name=C9F00_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24260;old_locus_tag=C9F00_24395;partial=true;start_range=.,1
NZ_PYKC01000171.1	GeneMarkS-2+	CDS	1	256	.	+	1	ID=cds-WP_210114172.1;Parent=gene-C9F00_RS24260;Dbxref=GenBank:WP_210114172.1;Name=WP_210114172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24260;partial=true;product=hypothetical protein;protein_id=WP_210114172.1;start_range=.,1;transl_table=11
NZ_PYKC01000171.1	RefSeq	gene	238	429	.	+	.	ID=gene-C9F00_RS23845;Name=C9F00_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23845;old_locus_tag=C9F00_24400
NZ_PYKC01000171.1	GeneMarkS-2+	CDS	238	429	.	+	0	ID=cds-WP_135492573.1;Parent=gene-C9F00_RS23845;Dbxref=GenBank:WP_135492573.1;Name=WP_135492573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS23845;product=hypothetical protein;protein_id=WP_135492573.1;transl_table=11
NZ_PYKC01000171.1	RefSeq	pseudogene	921	998	.	+	.	ID=gene-C9F00_RS24625;Name=C9F00_RS24625;end_range=998,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24625;partial=true;pseudo=true;start_range=.,921
NZ_PYKC01000171.1	Protein Homology	CDS	921	998	.	+	0	ID=cds-C9F00_RS24625;Parent=gene-C9F00_RS24625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F00_RS24625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,921;transl_table=11
##sequence-region NZ_PYKC01000051.1 1 4404
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000051.1	RefSeq	region	1	4404	.	+	.	ID=NZ_PYKC01000051.1:1..4404;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000051.1	RefSeq	gene	1	79	.	+	.	ID=gene-C9F00_RS24795;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS24795;partial=true;start_range=.,1
NZ_PYKC01000051.1	cmsearch	rRNA	1	79	.	+	.	ID=rna-C9F00_RS24795;Parent=gene-C9F00_RS24795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24795;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000051.1	cmsearch	exon	1	79	.	+	.	ID=exon-C9F00_RS24795-1;Parent=rna-C9F00_RS24795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24795;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000051.1	RefSeq	gene	261	1289	.	+	.	ID=gene-C9F00_RS08185;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9F00_RS08185;old_locus_tag=C9F00_08350
NZ_PYKC01000051.1	Protein Homology	CDS	261	1289	.	+	0	ID=cds-WP_135369316.1;Parent=gene-C9F00_RS08185;Dbxref=GenBank:WP_135369316.1;Name=WP_135369316.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9F00_RS08185;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_135369316.1;transl_table=11
NZ_PYKC01000051.1	RefSeq	gene	1286	2248	.	+	.	ID=gene-C9F00_RS08190;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9F00_RS08190;old_locus_tag=C9F00_08355
NZ_PYKC01000051.1	Protein Homology	CDS	1286	2248	.	+	0	ID=cds-WP_000655746.1;Parent=gene-C9F00_RS08190;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9F00_RS08190;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11
NZ_PYKC01000051.1	RefSeq	gene	2284	3234	.	-	.	ID=gene-C9F00_RS08195;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9F00_RS08195;old_locus_tag=C9F00_08360
NZ_PYKC01000051.1	Protein Homology	CDS	2284	3234	.	-	0	ID=cds-WP_000023068.1;Parent=gene-C9F00_RS08195;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9F00_RS08195;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11
NZ_PYKC01000051.1	RefSeq	gene	3443	3616	.	-	.	ID=gene-C9F00_RS08200;Name=C9F00_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08200;old_locus_tag=C9F00_08370
NZ_PYKC01000051.1	Protein Homology	CDS	3443	3616	.	-	0	ID=cds-WP_001541267.1;Parent=gene-C9F00_RS08200;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9F00_RS08200;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11
NZ_PYKC01000051.1	RefSeq	gene	3636	3711	.	+	.	ID=gene-C9F00_RS08205;Name=C9F00_RS08205;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS08205;old_locus_tag=C9F00_08375
NZ_PYKC01000051.1	tRNAscan-SE	tRNA	3636	3711	.	+	.	ID=rna-C9F00_RS08205;Parent=gene-C9F00_RS08205;anticodon=(pos:3669..3671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08205;product=tRNA-Thr
NZ_PYKC01000051.1	tRNAscan-SE	exon	3636	3711	.	+	.	ID=exon-C9F00_RS08205-1;Parent=rna-C9F00_RS08205;anticodon=(pos:3669..3671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08205;product=tRNA-Thr
NZ_PYKC01000051.1	RefSeq	gene	3720	3804	.	+	.	ID=gene-C9F00_RS08210;Name=C9F00_RS08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS08210;old_locus_tag=C9F00_08380
NZ_PYKC01000051.1	tRNAscan-SE	tRNA	3720	3804	.	+	.	ID=rna-C9F00_RS08210;Parent=gene-C9F00_RS08210;anticodon=(pos:3754..3756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08210;product=tRNA-Tyr
NZ_PYKC01000051.1	tRNAscan-SE	exon	3720	3804	.	+	.	ID=exon-C9F00_RS08210-1;Parent=rna-C9F00_RS08210;anticodon=(pos:3754..3756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08210;product=tRNA-Tyr
NZ_PYKC01000051.1	RefSeq	gene	3921	3995	.	+	.	ID=gene-C9F00_RS08215;Name=C9F00_RS08215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS08215;old_locus_tag=C9F00_08385
NZ_PYKC01000051.1	tRNAscan-SE	tRNA	3921	3995	.	+	.	ID=rna-C9F00_RS08215;Parent=gene-C9F00_RS08215;anticodon=(pos:3954..3956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08215;product=tRNA-Gly
NZ_PYKC01000051.1	tRNAscan-SE	exon	3921	3995	.	+	.	ID=exon-C9F00_RS08215-1;Parent=rna-C9F00_RS08215;anticodon=(pos:3954..3956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08215;product=tRNA-Gly
NZ_PYKC01000051.1	RefSeq	gene	4002	4077	.	+	.	ID=gene-C9F00_RS08220;Name=C9F00_RS08220;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS08220;old_locus_tag=C9F00_08390
NZ_PYKC01000051.1	tRNAscan-SE	tRNA	4002	4077	.	+	.	ID=rna-C9F00_RS08220;Parent=gene-C9F00_RS08220;anticodon=(pos:4035..4037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08220;product=tRNA-Thr
NZ_PYKC01000051.1	tRNAscan-SE	exon	4002	4077	.	+	.	ID=exon-C9F00_RS08220-1;Parent=rna-C9F00_RS08220;anticodon=(pos:4035..4037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS08220;product=tRNA-Thr
NZ_PYKC01000051.1	RefSeq	gene	4193	4404	.	+	.	ID=gene-C9F00_RS08225;Name=C9F00_RS08225;end_range=4404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08225;old_locus_tag=C9F00_08395;partial=true
NZ_PYKC01000051.1	Protein Homology	CDS	4193	4404	.	+	0	ID=cds-WP_000031661.1;Parent=gene-C9F00_RS08225;Dbxref=GenBank:WP_000031661.1;Name=WP_000031661.1;Ontology_term=GO:0003924,GO:0005525;end_range=4404,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F00_RS08225;partial=true;product=GTP-binding protein;protein_id=WP_000031661.1;transl_table=11
##sequence-region NZ_PYKC01000162.1 1 258
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000162.1	RefSeq	region	1	258	.	+	.	ID=NZ_PYKC01000162.1:1..258;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000162.1	RefSeq	gene	1	139	.	+	.	ID=gene-C9F00_RS24595;Name=C9F00_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24595;partial=true;start_range=.,1
NZ_PYKC01000162.1	Protein Homology	CDS	1	139	.	+	1	ID=cds-WP_245306399.1;Parent=gene-C9F00_RS24595;Dbxref=GenBank:WP_245306399.1;Name=WP_245306399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551857.1;locus_tag=C9F00_RS24595;partial=true;product=YdaE family protein;protein_id=WP_245306399.1;start_range=.,1;transl_table=11
NZ_PYKC01000162.1	RefSeq	pseudogene	161	258	.	+	.	ID=gene-C9F00_RS23485;Name=C9F00_RS23485;end_range=258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23485;old_locus_tag=C9F00_24025;partial=true;pseudo=true
NZ_PYKC01000162.1	Protein Homology	CDS	161	258	.	+	0	ID=cds-C9F00_RS23485;Parent=gene-C9F00_RS23485;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461566.1;locus_tag=C9F00_RS23485;partial=true;product=DNA breaking-rejoining protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000045.1 1 4034
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000045.1	RefSeq	region	1	4034	.	+	.	ID=NZ_PYKC01000045.1:1..4034;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000045.1	RefSeq	pseudogene	1	339	.	-	.	ID=gene-C9F00_RS07375;Name=C9F00_RS07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS07375;old_locus_tag=C9F00_07530;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000045.1	Protein Homology	CDS	1	339	.	-	0	ID=cds-C9F00_RS07375;Parent=gene-C9F00_RS07375;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9F00_RS07375;partial=true;product=phosphohydrolase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000045.1	RefSeq	gene	419	730	.	-	.	ID=gene-C9F00_RS07380;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9F00_RS07380;old_locus_tag=C9F00_07535
NZ_PYKC01000045.1	Protein Homology	CDS	419	730	.	-	0	ID=cds-WP_076707646.1;Parent=gene-C9F00_RS07380;Dbxref=GenBank:WP_076707646.1;Name=WP_076707646.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=C9F00_RS07380;product=cell division protein DrpB;protein_id=WP_076707646.1;transl_table=11
NZ_PYKC01000045.1	RefSeq	gene	1380	2576	.	+	.	ID=gene-C9F00_RS07385;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9F00_RS07385;old_locus_tag=C9F00_07540
NZ_PYKC01000045.1	Protein Homology	CDS	1380	2576	.	+	0	ID=cds-WP_001080660.1;Parent=gene-C9F00_RS07385;Dbxref=GenBank:WP_001080660.1;Name=WP_001080660.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9F00_RS07385;product=porin OmpS1;protein_id=WP_001080660.1;transl_table=11
NZ_PYKC01000045.1	RefSeq	gene	2834	3022	.	-	.	ID=gene-C9F00_RS07390;Name=C9F00_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07390;old_locus_tag=C9F00_07545
NZ_PYKC01000045.1	Protein Homology	CDS	2834	3022	.	-	0	ID=cds-WP_024131109.1;Parent=gene-C9F00_RS07390;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=C9F00_RS07390;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11
NZ_PYKC01000045.1	RefSeq	gene	3033	3245	.	-	.	ID=gene-C9F00_RS07395;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F00_RS07395;old_locus_tag=C9F00_07550
NZ_PYKC01000045.1	Protein Homology	CDS	3033	3245	.	-	0	ID=cds-WP_000208509.1;Parent=gene-C9F00_RS07395;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9F00_RS07395;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11
NZ_PYKC01000045.1	RefSeq	gene	3824	4034	.	-	.	ID=gene-C9F00_RS07400;Name=C9F00_RS07400;end_range=4034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07400;old_locus_tag=C9F00_07555;partial=true
NZ_PYKC01000045.1	Protein Homology	CDS	3824	4034	.	-	1	ID=cds-WP_135419988.1;Parent=gene-C9F00_RS07400;Dbxref=GenBank:WP_135419988.1;Name=WP_135419988.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;end_range=4034,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F00_RS07400;partial=true;product=integrase core domain-containing protein;protein_id=WP_135419988.1;transl_table=11
##sequence-region NZ_PYKC01000125.1 1 3945
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000125.1	RefSeq	region	1	3945	.	+	.	ID=NZ_PYKC01000125.1:1..3945;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000125.1	RefSeq	pseudogene	93	1163	.	-	.	ID=gene-C9F00_RS18785;Name=C9F00_RS18785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18785;old_locus_tag=C9F00_19235;partial=true;pseudo=true;start_range=.,93
NZ_PYKC01000125.1	Protein Homology	CDS	93	1163	.	-	0	ID=cds-C9F00_RS18785;Parent=gene-C9F00_RS18785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9F00_RS18785;partial=true;product=NarK family nitrate/nitrite MFS transporter;pseudo=true;start_range=.,93;transl_table=11
NZ_PYKC01000125.1	RefSeq	gene	1504	3300	.	+	.	ID=gene-C9F00_RS18795;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9F00_RS18795;old_locus_tag=C9F00_19245
NZ_PYKC01000125.1	Protein Homology	CDS	1504	3300	.	+	0	ID=cds-WP_000476244.1;Parent=gene-C9F00_RS18795;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9F00_RS18795;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11
NZ_PYKC01000125.1	RefSeq	gene	3293	3943	.	+	.	ID=gene-C9F00_RS18800;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9F00_RS18800;old_locus_tag=C9F00_19250
NZ_PYKC01000125.1	Protein Homology	CDS	3293	3943	.	+	0	ID=cds-WP_001064598.1;Parent=gene-C9F00_RS18800;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9F00_RS18800;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11
##sequence-region NZ_PYKC01000088.1 1 76272
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000088.1	RefSeq	region	1	76272	.	+	.	ID=NZ_PYKC01000088.1:1..76272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000088.1	RefSeq	gene	106	2034	.	+	.	ID=gene-C9F00_RS14205;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9F00_RS14205;old_locus_tag=C9F00_14545
NZ_PYKC01000088.1	Protein Homology	CDS	106	2034	.	+	0	ID=cds-WP_001144226.1;Parent=gene-C9F00_RS14205;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9F00_RS14205;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	2038	2580	.	+	.	ID=gene-C9F00_RS14210;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9F00_RS14210;old_locus_tag=C9F00_14550
NZ_PYKC01000088.1	Protein Homology	CDS	2038	2580	.	+	0	ID=cds-WP_001574431.1;Parent=gene-C9F00_RS14210;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9F00_RS14210;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	2676	2873	.	+	.	ID=gene-C9F00_RS14215;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9F00_RS14215;old_locus_tag=C9F00_14555
NZ_PYKC01000088.1	Protein Homology	CDS	2676	2873	.	+	0	ID=cds-WP_001124225.1;Parent=gene-C9F00_RS14215;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9F00_RS14215;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	2924	3280	.	+	.	ID=gene-C9F00_RS14220;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9F00_RS14220;old_locus_tag=C9F00_14560
NZ_PYKC01000088.1	Protein Homology	CDS	2924	3280	.	+	0	ID=cds-WP_000124850.1;Parent=gene-C9F00_RS14220;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9F00_RS14220;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_PYKC01000088.1	cmsearch	sequence_feature	3396	3519	.	+	.	ID=id-NZ_PYKC01000088.1:3396..3519;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000088.1	RefSeq	gene	3401	3445	.	+	.	ID=gene-C9F00_RS14225;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9F00_RS14225;old_locus_tag=C9F00_14565
NZ_PYKC01000088.1	Protein Homology	CDS	3401	3445	.	+	0	ID=cds-WP_001386830.1;Parent=gene-C9F00_RS14225;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9F00_RS14225;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	3582	4565	.	+	.	ID=gene-C9F00_RS14230;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9F00_RS14230;old_locus_tag=C9F00_14570
NZ_PYKC01000088.1	Protein Homology	CDS	3582	4565	.	+	0	ID=cds-WP_000018570.1;Parent=gene-C9F00_RS14230;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=C9F00_RS14230;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	4581	6968	.	+	.	ID=gene-C9F00_RS14235;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9F00_RS14235;old_locus_tag=C9F00_14575
NZ_PYKC01000088.1	Protein Homology	CDS	4581	6968	.	+	0	ID=cds-WP_000672402.1;Parent=gene-C9F00_RS14235;Dbxref=GenBank:WP_000672402.1;Name=WP_000672402.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F00_RS14235;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672402.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	6973	7272	.	+	.	ID=gene-C9F00_RS14240;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9F00_RS14240;old_locus_tag=C9F00_14580
NZ_PYKC01000088.1	Protein Homology	CDS	6973	7272	.	+	0	ID=cds-WP_001229266.1;Parent=gene-C9F00_RS14240;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9F00_RS14240;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	7475	8455	.	+	.	ID=gene-C9F00_RS14245;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9F00_RS14245;old_locus_tag=C9F00_14585
NZ_PYKC01000088.1	Protein Homology	CDS	7475	8455	.	+	0	ID=cds-WP_000954982.1;Parent=gene-C9F00_RS14245;Dbxref=GenBank:WP_000954982.1;Name=WP_000954982.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9F00_RS14245;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954982.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	8547	9098	.	+	.	ID=gene-C9F00_RS14250;Name=C9F00_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14250;old_locus_tag=C9F00_14590
NZ_PYKC01000088.1	Protein Homology	CDS	8547	9098	.	+	0	ID=cds-WP_094889204.1;Parent=gene-C9F00_RS14250;Dbxref=GenBank:WP_094889204.1;Name=WP_094889204.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9F00_RS14250;product=glutathione peroxidase;protein_id=WP_094889204.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	9098	9847	.	+	.	ID=gene-C9F00_RS14255;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9F00_RS14255;old_locus_tag=C9F00_14595
NZ_PYKC01000088.1	Protein Homology	CDS	9098	9847	.	+	0	ID=cds-WP_000080607.1;Parent=gene-C9F00_RS14255;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9F00_RS14255;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	9924	10388	.	+	.	ID=gene-C9F00_RS14260;Name=C9F00_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14260;old_locus_tag=C9F00_14600
NZ_PYKC01000088.1	Protein Homology	CDS	9924	10388	.	+	0	ID=cds-WP_001213258.1;Parent=gene-C9F00_RS14260;Dbxref=GenBank:WP_001213258.1;Name=WP_001213258.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9F00_RS14260;product=C40 family peptidase;protein_id=WP_001213258.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	10702	11412	.	+	.	ID=gene-C9F00_RS14265;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9F00_RS14265;old_locus_tag=C9F00_14605
NZ_PYKC01000088.1	Protein Homology	CDS	10702	11412	.	+	0	ID=cds-WP_048485288.1;Parent=gene-C9F00_RS14265;Dbxref=GenBank:WP_048485288.1;Name=WP_048485288.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9F00_RS14265;product=anti-FlhDC factor YdiV;protein_id=WP_048485288.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	11474	12916	.	+	.	ID=gene-C9F00_RS14270;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9F00_RS14270;old_locus_tag=C9F00_14610
NZ_PYKC01000088.1	Protein Homology	CDS	11474	12916	.	+	0	ID=cds-WP_135369769.1;Parent=gene-C9F00_RS14270;Dbxref=GenBank:WP_135369769.1;Name=WP_135369769.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9F00_RS14270;product=protein adenylyltransferase SelO;protein_id=WP_135369769.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	12951	13142	.	-	.	ID=gene-C9F00_RS14275;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9F00_RS14275;old_locus_tag=C9F00_14615
NZ_PYKC01000088.1	Protein Homology	CDS	12951	13142	.	-	0	ID=cds-WP_000089115.1;Parent=gene-C9F00_RS14275;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9F00_RS14275;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	13299	14345	.	-	.	ID=gene-C9F00_RS14280;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9F00_RS14280;old_locus_tag=C9F00_14620
NZ_PYKC01000088.1	Protein Homology	CDS	13299	14345	.	-	0	ID=cds-WP_001082196.1;Parent=gene-C9F00_RS14280;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9F00_RS14280;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	14501	15334	.	-	.	ID=gene-C9F00_RS14285;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9F00_RS14285;old_locus_tag=C9F00_14625
NZ_PYKC01000088.1	Protein Homology	CDS	14501	15334	.	-	0	ID=cds-WP_000370992.1;Parent=gene-C9F00_RS14285;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9F00_RS14285;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	15671	18049	.	+	.	ID=gene-C9F00_RS14290;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=C9F00_RS14290;old_locus_tag=C9F00_14630
NZ_PYKC01000088.1	Protein Homology	CDS	15671	18049	.	+	0	ID=cds-WP_000069340.1;Parent=gene-C9F00_RS14290;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9F00_RS14290;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	18091	19731	.	-	.	ID=gene-C9F00_RS14295;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9F00_RS14295;old_locus_tag=C9F00_14635
NZ_PYKC01000088.1	Protein Homology	CDS	18091	19731	.	-	0	ID=cds-WP_135369768.1;Parent=gene-C9F00_RS14295;Dbxref=GenBank:WP_135369768.1;Name=WP_135369768.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9F00_RS14295;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_135369768.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	19969	20262	.	-	.	ID=gene-C9F00_RS14300;Name=C9F00_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14300;old_locus_tag=C9F00_14640
NZ_PYKC01000088.1	Protein Homology	CDS	19969	20262	.	-	0	ID=cds-WP_000093359.1;Parent=gene-C9F00_RS14300;Dbxref=GenBank:WP_000093359.1;Name=WP_000093359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9F00_RS14300;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	20259	21545	.	-	.	ID=gene-C9F00_RS14305;Name=C9F00_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14305;old_locus_tag=C9F00_14645
NZ_PYKC01000088.1	Protein Homology	CDS	20259	21545	.	-	0	ID=cds-WP_001278565.1;Parent=gene-C9F00_RS14305;Dbxref=GenBank:WP_001278565.1;Name=WP_001278565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9F00_RS14305;product=FAD-dependent oxidoreductase;protein_id=WP_001278565.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	21602	22537	.	-	.	ID=gene-C9F00_RS14310;Name=C9F00_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14310;old_locus_tag=C9F00_14650
NZ_PYKC01000088.1	Protein Homology	CDS	21602	22537	.	-	0	ID=cds-WP_001015883.1;Parent=gene-C9F00_RS14310;Dbxref=GenBank:WP_001015883.1;Name=WP_001015883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9F00_RS14310;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015883.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	22559	23323	.	-	.	ID=gene-C9F00_RS14315;Name=C9F00_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14315;old_locus_tag=C9F00_14655
NZ_PYKC01000088.1	Protein Homology	CDS	22559	23323	.	-	0	ID=cds-WP_135369767.1;Parent=gene-C9F00_RS14315;Dbxref=GenBank:WP_135369767.1;Name=WP_135369767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9F00_RS14315;product=electron transfer flavoprotein;protein_id=WP_135369767.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	23786	24676	.	+	.	ID=gene-C9F00_RS14320;Name=C9F00_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14320;old_locus_tag=C9F00_14660
NZ_PYKC01000088.1	Protein Homology	CDS	23786	24676	.	+	0	ID=cds-WP_000284832.1;Parent=gene-C9F00_RS14320;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9F00_RS14320;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	24752	25903	.	-	.	ID=gene-C9F00_RS14325;Name=C9F00_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14325;old_locus_tag=C9F00_14665
NZ_PYKC01000088.1	Protein Homology	CDS	24752	25903	.	-	0	ID=cds-WP_000347819.1;Parent=gene-C9F00_RS14325;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9F00_RS14325;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	25917	27512	.	-	.	ID=gene-C9F00_RS14330;Name=C9F00_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14330;old_locus_tag=C9F00_14670
NZ_PYKC01000088.1	Protein Homology	CDS	25917	27512	.	-	0	ID=cds-WP_135492356.1;Parent=gene-C9F00_RS14330;Dbxref=GenBank:WP_135492356.1;Name=WP_135492356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9F00_RS14330;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_135492356.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	27666	28424	.	-	.	ID=gene-C9F00_RS14335;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9F00_RS14335;old_locus_tag=C9F00_14675
NZ_PYKC01000088.1	Protein Homology	CDS	27666	28424	.	-	0	ID=cds-WP_000860221.1;Parent=gene-C9F00_RS14335;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9F00_RS14335;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	28469	29335	.	-	.	ID=gene-C9F00_RS14340;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9F00_RS14340;old_locus_tag=C9F00_14680
NZ_PYKC01000088.1	Protein Homology	CDS	28469	29335	.	-	0	ID=cds-WP_000383488.1;Parent=gene-C9F00_RS14340;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9F00_RS14340;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	29402	30637	.	-	.	ID=gene-C9F00_RS14345;Name=C9F00_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14345;old_locus_tag=C9F00_14685
NZ_PYKC01000088.1	Protein Homology	CDS	29402	30637	.	-	0	ID=cds-WP_000081211.1;Parent=gene-C9F00_RS14345;Dbxref=GenBank:WP_000081211.1;Name=WP_000081211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9F00_RS14345;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	31150	32361	.	-	.	ID=gene-C9F00_RS14355;Name=C9F00_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14355;old_locus_tag=C9F00_14690
NZ_PYKC01000088.1	Protein Homology	CDS	31150	32361	.	-	0	ID=cds-WP_135369766.1;Parent=gene-C9F00_RS14355;Dbxref=GenBank:WP_135369766.1;Name=WP_135369766.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9F00_RS14355;product=MFS transporter;protein_id=WP_135369766.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	32502	32861	.	-	.	ID=gene-C9F00_RS14360;Name=C9F00_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14360;old_locus_tag=C9F00_14695
NZ_PYKC01000088.1	Protein Homology	CDS	32502	32861	.	-	0	ID=cds-WP_023237082.1;Parent=gene-C9F00_RS14360;Dbxref=GenBank:WP_023237082.1;Name=WP_023237082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9F00_RS14360;product=YdiL family protein;protein_id=WP_023237082.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	33029	33136	.	-	.	ID=gene-C9F00_RS14365;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9F00_RS14365;old_locus_tag=C9F00_14700
NZ_PYKC01000088.1	cmsearch	antisense_RNA	33029	33136	.	-	.	ID=rna-C9F00_RS14365;Parent=gene-C9F00_RS14365;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS14365;product=antisense sRNA RprA
NZ_PYKC01000088.1	cmsearch	exon	33029	33136	.	-	.	ID=exon-C9F00_RS14365-1;Parent=rna-C9F00_RS14365;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS14365;product=antisense sRNA RprA
NZ_PYKC01000088.1	RefSeq	gene	33319	34437	.	-	.	ID=gene-C9F00_RS14370;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9F00_RS14370;old_locus_tag=C9F00_14705
NZ_PYKC01000088.1	Protein Homology	CDS	33319	34437	.	-	0	ID=cds-WP_000248615.1;Parent=gene-C9F00_RS14370;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9F00_RS14370;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	34702	37758	.	+	.	ID=gene-C9F00_RS14375;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=C9F00_RS14375;old_locus_tag=C9F00_14710
NZ_PYKC01000088.1	Protein Homology	CDS	34702	37758	.	+	0	ID=cds-WP_000612923.1;Parent=gene-C9F00_RS14375;Dbxref=GenBank:WP_000612923.1;Name=WP_000612923.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9F00_RS14375;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612923.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	37755	38165	.	+	.	ID=gene-C9F00_RS14380;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9F00_RS14380;old_locus_tag=C9F00_14715
NZ_PYKC01000088.1	Protein Homology	CDS	37755	38165	.	+	0	ID=cds-WP_000637930.1;Parent=gene-C9F00_RS14380;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9F00_RS14380;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	38264	38452	.	+	.	ID=gene-C9F00_RS14385;Name=C9F00_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14385;old_locus_tag=C9F00_14720
NZ_PYKC01000088.1	Protein Homology	CDS	38264	38452	.	+	0	ID=cds-WP_001537749.1;Parent=gene-C9F00_RS14385;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9F00_RS14385;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	38740	40086	.	-	.	ID=gene-C9F00_RS14390;Name=C9F00_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14390;old_locus_tag=C9F00_14725
NZ_PYKC01000088.1	Protein Homology	CDS	38740	40086	.	-	0	ID=cds-WP_079802032.1;Parent=gene-C9F00_RS14390;Dbxref=GenBank:WP_079802032.1;Name=WP_079802032.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9F00_RS14390;product=L-cystine transporter;protein_id=WP_079802032.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	40513	40881	.	+	.	ID=gene-C9F00_RS14395;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9F00_RS14395;old_locus_tag=C9F00_14730
NZ_PYKC01000088.1	Protein Homology	CDS	40513	40881	.	+	0	ID=cds-WP_000418970.1;Parent=gene-C9F00_RS14395;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9F00_RS14395;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	40890	42377	.	+	.	ID=gene-C9F00_RS14400;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9F00_RS14400;old_locus_tag=C9F00_14735
NZ_PYKC01000088.1	Protein Homology	CDS	40890	42377	.	+	0	ID=cds-WP_000089383.1;Parent=gene-C9F00_RS14400;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F00_RS14400;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	42394	43140	.	+	.	ID=gene-C9F00_RS14405;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9F00_RS14405;old_locus_tag=C9F00_14740
NZ_PYKC01000088.1	Protein Homology	CDS	42394	43140	.	+	0	ID=cds-WP_000948902.1;Parent=gene-C9F00_RS14405;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9F00_RS14405;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	43115	44386	.	+	.	ID=gene-C9F00_RS14410;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9F00_RS14410;old_locus_tag=C9F00_14745
NZ_PYKC01000088.1	Protein Homology	CDS	43115	44386	.	+	0	ID=cds-WP_135369765.1;Parent=gene-C9F00_RS14410;Dbxref=GenBank:WP_135369765.1;Name=WP_135369765.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9F00_RS14410;product=Fe-S cluster assembly protein SufD;protein_id=WP_135369765.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	44383	45603	.	+	.	ID=gene-C9F00_RS14415;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9F00_RS14415;old_locus_tag=C9F00_14750
NZ_PYKC01000088.1	Protein Homology	CDS	44383	45603	.	+	0	ID=cds-WP_000143859.1;Parent=gene-C9F00_RS14415;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9F00_RS14415;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	45616	46032	.	+	.	ID=gene-C9F00_RS14420;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9F00_RS14420;old_locus_tag=C9F00_14755
NZ_PYKC01000088.1	Protein Homology	CDS	45616	46032	.	+	0	ID=cds-WP_000729470.1;Parent=gene-C9F00_RS14420;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9F00_RS14420;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	46187	47188	.	+	.	ID=gene-C9F00_RS14425;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=C9F00_RS14425;old_locus_tag=C9F00_14760
NZ_PYKC01000088.1	Protein Homology	CDS	46187	47188	.	+	0	ID=cds-WP_000817059.1;Parent=gene-C9F00_RS14425;Dbxref=GenBank:WP_000817059.1;Name=WP_000817059.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9F00_RS14425;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817059.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	47255	47494	.	-	.	ID=gene-C9F00_RS14430;Name=C9F00_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14430;old_locus_tag=C9F00_14765
NZ_PYKC01000088.1	Protein Homology	CDS	47255	47494	.	-	0	ID=cds-WP_001082332.1;Parent=gene-C9F00_RS14430;Dbxref=GenBank:WP_001082332.1;Name=WP_001082332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F00_RS14430;product=major outer membrane lipoprotein;protein_id=WP_001082332.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	47577	47813	.	-	.	ID=gene-C9F00_RS14435;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9F00_RS14435;old_locus_tag=C9F00_14770
NZ_PYKC01000088.1	Protein Homology	CDS	47577	47813	.	-	0	ID=cds-WP_001082307.1;Parent=gene-C9F00_RS14435;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9F00_RS14435;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	48124	49536	.	-	.	ID=gene-C9F00_RS14440;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=C9F00_RS14440;old_locus_tag=C9F00_14775
NZ_PYKC01000088.1	Protein Homology	CDS	48124	49536	.	-	0	ID=cds-WP_000751447.1;Parent=gene-C9F00_RS14440;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F00_RS14440;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	49544	49774	.	-	.	ID=gene-C9F00_RS24840;Name=C9F00_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24840
NZ_PYKC01000088.1	Protein Homology	CDS	49544	49774	.	-	0	ID=cds-WP_418143684.1;Parent=gene-C9F00_RS24840;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=C9F00_RS24840;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	49938	51281	.	-	.	ID=gene-C9F00_RS14445;Name=C9F00_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14445;old_locus_tag=C9F00_14785
NZ_PYKC01000088.1	Protein Homology	CDS	49938	51281	.	-	0	ID=cds-WP_000756093.1;Parent=gene-C9F00_RS14445;Dbxref=GenBank:WP_000756093.1;Name=WP_000756093.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9F00_RS14445;product=APC family permease;protein_id=WP_000756093.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	51303	52196	.	-	.	ID=gene-C9F00_RS14450;Name=C9F00_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14450;old_locus_tag=C9F00_14790
NZ_PYKC01000088.1	Protein Homology	CDS	51303	52196	.	-	0	ID=cds-WP_001000508.1;Parent=gene-C9F00_RS14450;Dbxref=GenBank:WP_001000508.1;Name=WP_001000508.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9F00_RS14450;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000508.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	52255	52992	.	-	.	ID=gene-C9F00_RS14455;Name=C9F00_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14455;old_locus_tag=C9F00_14795
NZ_PYKC01000088.1	Protein Homology	CDS	52255	52992	.	-	0	ID=cds-WP_000697187.1;Parent=gene-C9F00_RS14455;Dbxref=GenBank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9F00_RS14455;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	53004	54230	.	-	.	ID=gene-C9F00_RS14460;Name=C9F00_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14460;old_locus_tag=C9F00_14800
NZ_PYKC01000088.1	Protein Homology	CDS	53004	54230	.	-	0	ID=cds-WP_000471815.1;Parent=gene-C9F00_RS14460;Dbxref=GenBank:WP_000471815.1;Name=WP_000471815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9F00_RS14460;product=PfkB family carbohydrate kinase;protein_id=WP_000471815.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	54553	57615	.	-	.	ID=gene-C9F00_RS14465;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=C9F00_RS14465;old_locus_tag=C9F00_14805
NZ_PYKC01000088.1	Protein Homology	CDS	54553	57615	.	-	0	ID=cds-WP_135492358.1;Parent=gene-C9F00_RS14465;Dbxref=GenBank:WP_135492358.1;Name=WP_135492358.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9F00_RS14465;product=tetrathionate reductase subunit TtrA;protein_id=WP_135492358.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	57608	58630	.	-	.	ID=gene-C9F00_RS14470;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9F00_RS14470;old_locus_tag=C9F00_14810
NZ_PYKC01000088.1	Protein Homology	CDS	57608	58630	.	-	0	ID=cds-WP_000149760.1;Parent=gene-C9F00_RS14470;Dbxref=GenBank:WP_000149760.1;Name=WP_000149760.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9F00_RS14470;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149760.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	58631	59365	.	-	.	ID=gene-C9F00_RS14475;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9F00_RS14475;old_locus_tag=C9F00_14815
NZ_PYKC01000088.1	Protein Homology	CDS	58631	59365	.	-	0	ID=cds-WP_001523928.1;Parent=gene-C9F00_RS14475;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=C9F00_RS14475;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	59547	61325	.	+	.	ID=gene-C9F00_RS14480;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9F00_RS14480;old_locus_tag=C9F00_14820
NZ_PYKC01000088.1	Protein Homology	CDS	59547	61325	.	+	0	ID=cds-WP_135369764.1;Parent=gene-C9F00_RS14480;Dbxref=GenBank:WP_135369764.1;Name=WP_135369764.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F00_RS14480;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_135369764.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	61300	61920	.	+	.	ID=gene-C9F00_RS14485;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9F00_RS14485;old_locus_tag=C9F00_14825
NZ_PYKC01000088.1	Protein Homology	CDS	61300	61920	.	+	0	ID=cds-WP_135369763.1;Parent=gene-C9F00_RS14485;Dbxref=GenBank:WP_135369763.1;Name=WP_135369763.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9F00_RS14485;product=tetrathionate respiration response regulator TtrR;protein_id=WP_135369763.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	62018	62230	.	+	.	ID=gene-C9F00_RS14490;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9F00_RS14490;old_locus_tag=C9F00_14830
NZ_PYKC01000088.1	Protein Homology	CDS	62018	62230	.	+	0	ID=cds-WP_000165779.1;Parent=gene-C9F00_RS14490;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9F00_RS14490;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	62326	63285	.	-	.	ID=gene-C9F00_RS14495;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9F00_RS14495;old_locus_tag=C9F00_14835
NZ_PYKC01000088.1	Protein Homology	CDS	62326	63285	.	-	0	ID=cds-WP_020839382.1;Parent=gene-C9F00_RS14495;Dbxref=GenBank:WP_020839382.1;Name=WP_020839382.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9F00_RS14495;product=transcriptional regulator MlrB;protein_id=WP_020839382.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	63457	64185	.	-	.	ID=gene-C9F00_RS14500;Name=C9F00_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14500;old_locus_tag=C9F00_14840
NZ_PYKC01000088.1	Protein Homology	CDS	63457	64185	.	-	0	ID=cds-WP_000122318.1;Parent=gene-C9F00_RS14500;Dbxref=GenBank:WP_000122318.1;Name=WP_000122318.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9F00_RS14500;product=MerR family transcriptional regulator;protein_id=WP_000122318.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	64364	65002	.	-	.	ID=gene-C9F00_RS14505;Name=C9F00_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14505;old_locus_tag=C9F00_14845
NZ_PYKC01000088.1	Protein Homology	CDS	64364	65002	.	-	0	ID=cds-WP_023234474.1;Parent=gene-C9F00_RS14505;Dbxref=GenBank:WP_023234474.1;Name=WP_023234474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9F00_RS14505;product=two component system response regulator;protein_id=WP_023234474.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	65033	67795	.	-	.	ID=gene-C9F00_RS14510;Name=C9F00_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14510;old_locus_tag=C9F00_14850
NZ_PYKC01000088.1	Protein Homology	CDS	65033	67795	.	-	0	ID=cds-WP_135369762.1;Parent=gene-C9F00_RS14510;Dbxref=GenBank:WP_135369762.1;Name=WP_135369762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9F00_RS14510;product=two component system sensor kinase;protein_id=WP_135369762.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	68196	68597	.	+	.	ID=gene-C9F00_RS14515;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9F00_RS14515;old_locus_tag=C9F00_14855
NZ_PYKC01000088.1	Protein Homology	CDS	68196	68597	.	+	0	ID=cds-WP_001588845.1;Parent=gene-C9F00_RS14515;Dbxref=GenBank:WP_001588845.1;Name=WP_001588845.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9F00_RS14515;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001588845.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	68599	70092	.	+	.	ID=gene-C9F00_RS14520;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9F00_RS14520;old_locus_tag=C9F00_14860
NZ_PYKC01000088.1	Protein Homology	CDS	68599	70092	.	+	0	ID=cds-WP_000261287.1;Parent=gene-C9F00_RS14520;Dbxref=GenBank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9F00_RS14520;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	70073	71284	.	+	.	ID=gene-C9F00_RS14525;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9F00_RS14525;old_locus_tag=C9F00_14865
NZ_PYKC01000088.1	Protein Homology	CDS	70073	71284	.	+	0	ID=cds-WP_135369513.1;Parent=gene-C9F00_RS14525;Dbxref=GenBank:WP_135369513.1;Name=WP_135369513.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9F00_RS14525;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_135369513.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	71292	71534	.	+	.	ID=gene-C9F00_RS14530;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9F00_RS14530;old_locus_tag=C9F00_14870
NZ_PYKC01000088.1	Protein Homology	CDS	71292	71534	.	+	0	ID=cds-WP_080217535.1;Parent=gene-C9F00_RS14530;Dbxref=GenBank:WP_080217535.1;Name=WP_080217535.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9F00_RS14530;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_080217535.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	71798	72124	.	+	.	ID=gene-C9F00_RS14535;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F00_RS14535;old_locus_tag=C9F00_14875
NZ_PYKC01000088.1	Protein Homology	CDS	71798	72124	.	+	0	ID=cds-WP_000972855.1;Parent=gene-C9F00_RS14535;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9F00_RS14535;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	72131	72721	.	+	.	ID=gene-C9F00_RS14540;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9F00_RS14540;old_locus_tag=C9F00_14880
NZ_PYKC01000088.1	Protein Homology	CDS	72131	72721	.	+	0	ID=cds-WP_000094419.1;Parent=gene-C9F00_RS14540;Dbxref=GenBank:WP_000094419.1;Name=WP_000094419.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9F00_RS14540;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094419.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	72718	73191	.	+	.	ID=gene-C9F00_RS14545;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9F00_RS14545;old_locus_tag=C9F00_14885
NZ_PYKC01000088.1	Protein Homology	CDS	72718	73191	.	+	0	ID=cds-WP_000711023.1;Parent=gene-C9F00_RS14545;Dbxref=GenBank:WP_000711023.1;Name=WP_000711023.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9F00_RS14545;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711023.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	73194	74648	.	+	.	ID=gene-C9F00_RS14550;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9F00_RS14550;old_locus_tag=C9F00_14890
NZ_PYKC01000088.1	Protein Homology	CDS	73194	74648	.	+	0	ID=cds-WP_135369512.1;Parent=gene-C9F00_RS14550;Dbxref=GenBank:WP_135369512.1;Name=WP_135369512.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9F00_RS14550;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_135369512.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	74664	75251	.	+	.	ID=gene-C9F00_RS14555;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9F00_RS14555;old_locus_tag=C9F00_14895
NZ_PYKC01000088.1	Protein Homology	CDS	74664	75251	.	+	0	ID=cds-WP_135369511.1;Parent=gene-C9F00_RS14555;Dbxref=GenBank:WP_135369511.1;Name=WP_135369511.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9F00_RS14555;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_135369511.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	75254	75670	.	+	.	ID=gene-C9F00_RS14560;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9F00_RS14560;old_locus_tag=C9F00_14900
NZ_PYKC01000088.1	Protein Homology	CDS	75254	75670	.	+	0	ID=cds-WP_000249606.1;Parent=gene-C9F00_RS14560;Dbxref=GenBank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9F00_RS14560;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	gene	75722	76156	.	+	.	ID=gene-C9F00_RS14565;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=C9F00_RS14565;old_locus_tag=C9F00_14905
NZ_PYKC01000088.1	Protein Homology	CDS	75722	76156	.	+	0	ID=cds-WP_000979963.1;Parent=gene-C9F00_RS14565;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9F00_RS14565;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11
NZ_PYKC01000088.1	RefSeq	pseudogene	76172	76272	.	+	.	ID=gene-C9F00_RS14570;Name=C9F00_RS14570;end_range=76272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14570;old_locus_tag=C9F00_14910;partial=true;pseudo=true
NZ_PYKC01000088.1	Protein Homology	CDS	76172	76272	.	+	0	ID=cds-C9F00_RS14570;Parent=gene-C9F00_RS14570;Note=with SseG is involved in the aggregation of the host endosomes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=76272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9F00_RS14570;partial=true;product=type III secretion systems effector SseF;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000144.1 1 3404
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000144.1	RefSeq	region	1	3404	.	+	.	ID=NZ_PYKC01000144.1:1..3404;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000144.1	RefSeq	gene	1	2681	.	-	.	ID=gene-C9F00_RS22040;Name=C9F00_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22040;old_locus_tag=C9F00_22560;partial=true;start_range=.,1
NZ_PYKC01000144.1	Protein Homology	CDS	1	2681	.	-	0	ID=cds-WP_135492518.1;Parent=gene-C9F00_RS22040;Dbxref=GenBank:WP_135492518.1;Name=WP_135492518.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F00_RS22040;partial=true;product=nitrate reductase subunit alpha;protein_id=WP_135492518.1;start_range=.,1;transl_table=11
NZ_PYKC01000144.1	RefSeq	pseudogene	3069	3404	.	-	.	ID=gene-C9F00_RS22045;Name=C9F00_RS22045;end_range=3404,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22045;old_locus_tag=C9F00_22565;partial=true;pseudo=true
NZ_PYKC01000144.1	Protein Homology	CDS	3069	3404	.	-	0	ID=cds-C9F00_RS22045;Parent=gene-C9F00_RS22045;Note=involved in the transport of nitrate and nitrite%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9F00_RS22045;partial=true;product=nitrate/nitrite transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000077.1 1 972
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000077.1	RefSeq	region	1	972	.	+	.	ID=NZ_PYKC01000077.1:1..972;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000077.1	RefSeq	gene	1	972	.	-	.	ID=gene-C9F00_RS13270;Name=C9F00_RS13270;end_range=972,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13270;old_locus_tag=C9F00_13600;partial=true;start_range=.,1
NZ_PYKC01000077.1	Protein Homology	CDS	1	972	.	-	1	ID=cds-WP_135492331.1;Parent=gene-C9F00_RS13270;Dbxref=GenBank:WP_135492331.1;Name=WP_135492331.1;Ontology_term=GO:0007165,GO:0016020;end_range=972,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076209.1;locus_tag=C9F00_RS13270;partial=true;product=HAMP domain-containing protein;protein_id=WP_135492331.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000106.1 1 968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000106.1	RefSeq	region	1	968	.	+	.	ID=NZ_PYKC01000106.1:1..968;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000106.1	RefSeq	gene	1	968	.	-	.	ID=gene-C9F00_RS17095;Name=tuf;end_range=968,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9F00_RS17095;old_locus_tag=C9F00_17520;partial=true;start_range=.,1
NZ_PYKC01000106.1	Protein Homology	CDS	1	968	.	-	0	ID=cds-WP_001672510.1;Parent=gene-C9F00_RS17095;Dbxref=GenBank:WP_001672510.1;Name=WP_001672510.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=968,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9F00_RS17095;partial=true;product=elongation factor Tu;protein_id=WP_001672510.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000023.1 1 3202
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000023.1	RefSeq	region	1	3202	.	+	.	ID=NZ_PYKC01000023.1:1..3202;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000023.1	RefSeq	gene	1	802	.	-	.	ID=gene-C9F00_RS04510;Name=C9F00_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04510;old_locus_tag=C9F00_04580;partial=true;start_range=.,1
NZ_PYKC01000023.1	Protein Homology	CDS	1	802	.	-	0	ID=cds-WP_167850712.1;Parent=gene-C9F00_RS04510;Dbxref=GenBank:WP_167850712.1;Name=WP_167850712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9F00_RS04510;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_167850712.1;start_range=.,1;transl_table=11
NZ_PYKC01000023.1	RefSeq	gene	1025	1453	.	+	.	ID=gene-C9F00_RS04515;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9F00_RS04515;old_locus_tag=C9F00_04585
NZ_PYKC01000023.1	Protein Homology	CDS	1025	1453	.	+	0	ID=cds-WP_000278499.1;Parent=gene-C9F00_RS04515;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9F00_RS04515;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11
NZ_PYKC01000023.1	RefSeq	gene	1521	2288	.	-	.	ID=gene-C9F00_RS04520;Name=C9F00_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04520;old_locus_tag=C9F00_04590
NZ_PYKC01000023.1	Protein Homology	CDS	1521	2288	.	-	0	ID=cds-WP_000417096.1;Parent=gene-C9F00_RS04520;Dbxref=GenBank:WP_000417096.1;Name=WP_000417096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9F00_RS04520;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417096.1;transl_table=11
NZ_PYKC01000023.1	RefSeq	gene	2288	2845	.	-	.	ID=gene-C9F00_RS04525;Name=C9F00_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04525;old_locus_tag=C9F00_04595
NZ_PYKC01000023.1	Protein Homology	CDS	2288	2845	.	-	0	ID=cds-WP_001250381.1;Parent=gene-C9F00_RS04525;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9F00_RS04525;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11
NZ_PYKC01000023.1	RefSeq	gene	2842	3202	.	-	.	ID=gene-C9F00_RS04530;Name=C9F00_RS04530;end_range=3202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04530;old_locus_tag=C9F00_04600;partial=true
NZ_PYKC01000023.1	Protein Homology	CDS	2842	3202	.	-	1	ID=cds-WP_280954438.1;Parent=gene-C9F00_RS04530;Dbxref=GenBank:WP_280954438.1;Name=WP_280954438.1;Ontology_term=GO:0016491,GO:0043546;end_range=3202,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022090.1;locus_tag=C9F00_RS04530;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_280954438.1;transl_table=11
##sequence-region NZ_PYKC01000073.1 1 3124
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000073.1	RefSeq	region	1	3124	.	+	.	ID=NZ_PYKC01000073.1:1..3124;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000073.1	RefSeq	pseudogene	60	1169	.	+	.	ID=gene-C9F00_RS12625;Name=C9F00_RS12625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS12625;old_locus_tag=C9F00_12940;partial=true;pseudo=true;start_range=.,60
NZ_PYKC01000073.1	Protein Homology	CDS	60	1169	.	+	0	ID=cds-C9F00_RS12625;Parent=gene-C9F00_RS12625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9F00_RS12625;partial=true;product=SLC13 family permease;pseudo=true;start_range=.,60;transl_table=11
NZ_PYKC01000073.1	RefSeq	gene	1202	2101	.	+	.	ID=gene-C9F00_RS12630;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9F00_RS12630;old_locus_tag=C9F00_12945
NZ_PYKC01000073.1	Protein Homology	CDS	1202	2101	.	+	0	ID=cds-WP_000045349.1;Parent=gene-C9F00_RS12630;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9F00_RS12630;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11
NZ_PYKC01000073.1	RefSeq	gene	2101	2718	.	+	.	ID=gene-C9F00_RS12635;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9F00_RS12635;old_locus_tag=C9F00_12950
NZ_PYKC01000073.1	Protein Homology	CDS	2101	2718	.	+	0	ID=cds-WP_000162405.1;Parent=gene-C9F00_RS12635;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9F00_RS12635;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11
NZ_PYKC01000073.1	RefSeq	gene	2875	3117	.	+	.	ID=gene-C9F00_RS12640;Name=C9F00_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12640;old_locus_tag=C9F00_12955
NZ_PYKC01000073.1	Protein Homology	CDS	2875	3117	.	+	0	ID=cds-WP_000180119.1;Parent=gene-C9F00_RS12640;Dbxref=GenBank:WP_000180119.1;Name=WP_000180119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128597.1;locus_tag=C9F00_RS12640;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180119.1;transl_table=11
##sequence-region NZ_PYKC01000020.1 1 2937
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000020.1	RefSeq	region	1	2937	.	+	.	ID=NZ_PYKC01000020.1:1..2937;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000020.1	RefSeq	gene	76	735	.	+	.	ID=gene-C9F00_RS04040;Name=C9F00_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04040;old_locus_tag=C9F00_04095
NZ_PYKC01000020.1	Protein Homology	CDS	76	735	.	+	0	ID=cds-WP_000009241.1;Parent=gene-C9F00_RS04040;Dbxref=GenBank:WP_000009241.1;Name=WP_000009241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009241.1;locus_tag=C9F00_RS04040;product=DUF2726 domain-containing protein;protein_id=WP_000009241.1;transl_table=11
NZ_PYKC01000020.1	RefSeq	gene	785	2040	.	-	.	ID=gene-C9F00_RS04045;Name=C9F00_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04045;old_locus_tag=C9F00_04100
NZ_PYKC01000020.1	Protein Homology	CDS	1689	2040	.	-	0	ID=cds-WP_135369211.1;Parent=gene-C9F00_RS04045;Dbxref=GenBank:WP_135369211.1;Name=WP_135369211.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F00_RS04045;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369211.1;transl_table=11
NZ_PYKC01000020.1	Protein Homology	CDS	785	1689	.	-	2	ID=cds-WP_135369211.1;Parent=gene-C9F00_RS04045;Dbxref=GenBank:WP_135369211.1;Name=WP_135369211.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F00_RS04045;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369211.1;transl_table=11
NZ_PYKC01000020.1	RefSeq	pseudogene	2158	2458	.	-	.	ID=gene-C9F00_RS04050;Name=C9F00_RS04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS04050;old_locus_tag=C9F00_04105;pseudo=true
NZ_PYKC01000020.1	Protein Homology	CDS	2158	2458	.	-	0	ID=cds-C9F00_RS04050;Parent=gene-C9F00_RS04050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=C9F00_RS04050;product=YciI family protein;pseudo=true;transl_table=11
NZ_PYKC01000020.1	RefSeq	gene	2666	2937	.	+	.	ID=gene-C9F00_RS04055;Name=C9F00_RS04055;end_range=2937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04055;old_locus_tag=C9F00_04110;partial=true
NZ_PYKC01000020.1	Protein Homology	CDS	2666	2937	.	+	0	ID=cds-WP_135420943.1;Parent=gene-C9F00_RS04055;Dbxref=GenBank:WP_135420943.1;Name=WP_135420943.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;end_range=2937,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9F00_RS04055;partial=true;product=transposase;protein_id=WP_135420943.1;transl_table=11
##sequence-region NZ_PYKC01000157.1 1 75829
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000157.1	RefSeq	region	1	75829	.	+	.	ID=NZ_PYKC01000157.1:1..75829;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000157.1	RefSeq	gene	131	1051	.	-	.	ID=gene-C9F00_RS22925;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9F00_RS22925;old_locus_tag=C9F00_23460
NZ_PYKC01000157.1	Protein Homology	CDS	131	1051	.	-	0	ID=cds-WP_135369558.1;Parent=gene-C9F00_RS22925;Dbxref=GenBank:WP_135369558.1;Name=WP_135369558.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9F00_RS22925;product=agmatinase;protein_id=WP_135369558.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	1256	2212	.	-	.	ID=gene-C9F00_RS22930;Name=C9F00_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22930;old_locus_tag=C9F00_23465
NZ_PYKC01000157.1	Protein Homology	CDS	1256	2212	.	-	0	ID=cds-WP_135420025.1;Parent=gene-C9F00_RS22930;Dbxref=GenBank:WP_135420025.1;Name=WP_135420025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9F00_RS22930;product=alpha/beta fold hydrolase;protein_id=WP_135420025.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	2426	2899	.	-	.	ID=gene-C9F00_RS22935;Name=C9F00_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22935;old_locus_tag=C9F00_23470
NZ_PYKC01000157.1	Protein Homology	CDS	2426	2899	.	-	0	ID=cds-WP_000965536.1;Parent=gene-C9F00_RS22935;Dbxref=GenBank:WP_000965536.1;Name=WP_000965536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9F00_RS22935;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000965536.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	2938	3945	.	-	.	ID=gene-C9F00_RS22940;Name=C9F00_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22940;old_locus_tag=C9F00_23475
NZ_PYKC01000157.1	Protein Homology	CDS	2938	3945	.	-	0	ID=cds-WP_000104231.1;Parent=gene-C9F00_RS22940;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9F00_RS22940;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	3959	4975	.	-	.	ID=gene-C9F00_RS22945;Name=C9F00_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22945;old_locus_tag=C9F00_23480
NZ_PYKC01000157.1	Protein Homology	CDS	3959	4975	.	-	0	ID=cds-WP_000853913.1;Parent=gene-C9F00_RS22945;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9F00_RS22945;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	4978	6450	.	-	.	ID=gene-C9F00_RS22950;Name=C9F00_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22950;old_locus_tag=C9F00_23485
NZ_PYKC01000157.1	Protein Homology	CDS	4978	6450	.	-	0	ID=cds-WP_000379533.1;Parent=gene-C9F00_RS22950;Dbxref=GenBank:WP_000379533.1;Name=WP_000379533.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9F00_RS22950;product=mannitol dehydrogenase family protein;protein_id=WP_000379533.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	7291	7368	.	+	.	ID=gene-C9F00_RS24660;Name=C9F00_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24660
NZ_PYKC01000157.1	Protein Homology	CDS	7291	7368	.	+	0	ID=cds-WP_023228383.1;Parent=gene-C9F00_RS24660;Dbxref=GenBank:WP_023228383.1;Name=WP_023228383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=C9F00_RS24660;product=hypothetical protein;protein_id=WP_023228383.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	7683	8483	.	-	.	ID=gene-C9F00_RS22960;Name=C9F00_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22960;old_locus_tag=C9F00_23495
NZ_PYKC01000157.1	Protein Homology	CDS	7683	8483	.	-	0	ID=cds-WP_001576357.1;Parent=gene-C9F00_RS22960;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9F00_RS22960;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	8637	9368	.	-	.	ID=gene-C9F00_RS22965;Name=C9F00_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22965;old_locus_tag=C9F00_23500
NZ_PYKC01000157.1	Protein Homology	CDS	8637	9368	.	-	0	ID=cds-WP_000032796.1;Parent=gene-C9F00_RS22965;Dbxref=GenBank:WP_000032796.1;Name=WP_000032796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9F00_RS22965;product=hypothetical protein;protein_id=WP_000032796.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	9513	11489	.	-	.	ID=gene-C9F00_RS22970;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9F00_RS22970;old_locus_tag=C9F00_23505
NZ_PYKC01000157.1	Protein Homology	CDS	9513	11489	.	-	0	ID=cds-WP_001278580.1;Parent=gene-C9F00_RS22970;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9F00_RS22970;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	11498	11629	.	-	.	ID=gene-C9F00_RS22975;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9F00_RS22975;old_locus_tag=C9F00_23510
NZ_PYKC01000157.1	Protein Homology	CDS	11498	11629	.	-	0	ID=cds-WP_000729109.1;Parent=gene-C9F00_RS22975;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9F00_RS22975;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	11715	11864	.	-	.	ID=gene-C9F00_RS24665;Name=C9F00_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24665
NZ_PYKC01000157.1	Protein Homology	CDS	11715	11864	.	-	0	ID=cds-WP_280954502.1;Parent=gene-C9F00_RS24665;Dbxref=GenBank:WP_280954502.1;Name=WP_280954502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=C9F00_RS24665;product=hypothetical protein;protein_id=WP_280954502.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	11924	12223	.	-	.	ID=gene-C9F00_RS22985;Name=C9F00_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22985;old_locus_tag=C9F00_23520
NZ_PYKC01000157.1	GeneMarkS-2+	CDS	11924	12223	.	-	0	ID=cds-WP_001540882.1;Parent=gene-C9F00_RS22985;Dbxref=GenBank:WP_001540882.1;Name=WP_001540882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS22985;product=hypothetical protein;protein_id=WP_001540882.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	12279	13433	.	+	.	ID=gene-C9F00_RS22990;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9F00_RS22990;old_locus_tag=C9F00_23525
NZ_PYKC01000157.1	Protein Homology	CDS	12279	13433	.	+	0	ID=cds-WP_135492547.1;Parent=gene-C9F00_RS22990;Dbxref=GenBank:WP_135492547.1;Name=WP_135492547.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9F00_RS22990;product=methionine adenosyltransferase;protein_id=WP_135492547.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	13926	15320	.	+	.	ID=gene-C9F00_RS22995;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=C9F00_RS22995;old_locus_tag=C9F00_23530
NZ_PYKC01000157.1	Protein Homology	CDS	13926	15320	.	+	0	ID=cds-WP_135492549.1;Parent=gene-C9F00_RS22995;Dbxref=GenBank:WP_135492549.1;Name=WP_135492549.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9F00_RS22995;product=galactose/proton symporter;protein_id=WP_135492549.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	15399	15896	.	+	.	ID=gene-C9F00_RS23000;Name=C9F00_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23000;old_locus_tag=C9F00_23535
NZ_PYKC01000157.1	Protein Homology	CDS	15399	15896	.	+	0	ID=cds-WP_000856775.1;Parent=gene-C9F00_RS23000;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9F00_RS23000;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	15992	16699	.	+	.	ID=gene-C9F00_RS23005;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9F00_RS23005;old_locus_tag=C9F00_23540
NZ_PYKC01000157.1	Protein Homology	CDS	15992	16699	.	+	0	ID=cds-WP_000286133.1;Parent=gene-C9F00_RS23005;Dbxref=GenBank:WP_000286133.1;Name=WP_000286133.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9F00_RS23005;product=deoxyribonuclease I;protein_id=WP_000286133.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	16776	17507	.	+	.	ID=gene-C9F00_RS23010;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9F00_RS23010;old_locus_tag=C9F00_23545
NZ_PYKC01000157.1	Protein Homology	CDS	16776	17507	.	+	0	ID=cds-WP_001222489.1;Parent=gene-C9F00_RS23010;Dbxref=GenBank:WP_001222489.1;Name=WP_001222489.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9F00_RS23010;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222489.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	17527	18474	.	+	.	ID=gene-C9F00_RS23015;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9F00_RS23015;old_locus_tag=C9F00_23550
NZ_PYKC01000157.1	Protein Homology	CDS	17527	18474	.	+	0	ID=cds-WP_000593248.1;Parent=gene-C9F00_RS23015;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9F00_RS23015;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	18690	19253	.	+	.	ID=gene-C9F00_RS23020;Name=C9F00_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23020;old_locus_tag=C9F00_23555
NZ_PYKC01000157.1	Protein Homology	CDS	18690	19253	.	+	0	ID=cds-WP_001053173.1;Parent=gene-C9F00_RS23020;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9F00_RS23020;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	19253	19669	.	+	.	ID=gene-C9F00_RS23025;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9F00_RS23025;old_locus_tag=C9F00_23560
NZ_PYKC01000157.1	Protein Homology	CDS	19253	19669	.	+	0	ID=cds-WP_000017096.1;Parent=gene-C9F00_RS23025;Dbxref=GenBank:WP_000017096.1;Name=WP_000017096.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9F00_RS23025;product=Holliday junction resolvase RuvX;protein_id=WP_000017096.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	19716	20402	.	-	.	ID=gene-C9F00_RS23030;Name=C9F00_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23030;old_locus_tag=C9F00_23565
NZ_PYKC01000157.1	Protein Homology	CDS	19716	20402	.	-	0	ID=cds-WP_000098324.1;Parent=gene-C9F00_RS23030;Dbxref=GenBank:WP_000098324.1;Name=WP_000098324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9F00_RS23030;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098324.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	20534	21514	.	-	.	ID=gene-C9F00_RS23035;Name=C9F00_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23035;old_locus_tag=C9F00_23570
NZ_PYKC01000157.1	Protein Homology	CDS	20534	21514	.	-	0	ID=cds-WP_023237543.1;Parent=gene-C9F00_RS23035;Dbxref=GenBank:WP_023237543.1;Name=WP_023237543.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9F00_RS23035;product=type IV pilus twitching motility protein PilT;protein_id=WP_023237543.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	21532	22236	.	+	.	ID=gene-C9F00_RS23040;Name=C9F00_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23040;old_locus_tag=C9F00_23575
NZ_PYKC01000157.1	Protein Homology	CDS	21532	22236	.	+	0	ID=cds-WP_000997790.1;Parent=gene-C9F00_RS23040;Dbxref=GenBank:WP_000997790.1;Name=WP_000997790.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9F00_RS23040;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997790.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	22255	22821	.	+	.	ID=gene-C9F00_RS23045;Name=C9F00_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23045;old_locus_tag=C9F00_23580
NZ_PYKC01000157.1	Protein Homology	CDS	22255	22821	.	+	0	ID=cds-WP_001094848.1;Parent=gene-C9F00_RS23045;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9F00_RS23045;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	22818	23108	.	+	.	ID=gene-C9F00_RS23050;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9F00_RS23050;old_locus_tag=C9F00_23585
NZ_PYKC01000157.1	Protein Homology	CDS	22818	23108	.	+	0	ID=cds-WP_001277205.1;Parent=gene-C9F00_RS23050;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9F00_RS23050;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	23116	23709	.	+	.	ID=gene-C9F00_RS23055;Name=C9F00_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23055;old_locus_tag=C9F00_23590
NZ_PYKC01000157.1	Protein Homology	CDS	23116	23709	.	+	0	ID=cds-WP_001174769.1;Parent=gene-C9F00_RS23055;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9F00_RS23055;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	23702	24838	.	+	.	ID=gene-C9F00_RS23060;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9F00_RS23060;old_locus_tag=C9F00_23595
NZ_PYKC01000157.1	Protein Homology	CDS	23702	24838	.	+	0	ID=cds-WP_023214414.1;Parent=gene-C9F00_RS23060;Dbxref=GenBank:WP_023214414.1;Name=WP_023214414.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9F00_RS23060;product=radical SAM family heme chaperone HemW;protein_id=WP_023214414.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	24930	25937	.	-	.	ID=gene-C9F00_RS23065;Name=C9F00_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23065;old_locus_tag=C9F00_23600
NZ_PYKC01000157.1	Protein Homology	CDS	24930	25937	.	-	0	ID=cds-WP_000252196.1;Parent=gene-C9F00_RS23065;Dbxref=GenBank:WP_000252196.1;Name=WP_000252196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9F00_RS23065;product=DUF1202 domain-containing protein;protein_id=WP_000252196.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	26070	27116	.	-	.	ID=gene-C9F00_RS23070;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9F00_RS23070;old_locus_tag=C9F00_23605
NZ_PYKC01000157.1	Protein Homology	CDS	26070	27116	.	-	0	ID=cds-WP_000394189.1;Parent=gene-C9F00_RS23070;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9F00_RS23070;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	27305	28024	.	-	.	ID=gene-C9F00_RS23075;Name=C9F00_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23075;old_locus_tag=C9F00_23610
NZ_PYKC01000157.1	Protein Homology	CDS	27305	28024	.	-	0	ID=cds-WP_135369394.1;Parent=gene-C9F00_RS23075;Dbxref=GenBank:WP_135369394.1;Name=WP_135369394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9F00_RS23075;product=DUF2884 domain-containing protein;protein_id=WP_135369394.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	28074	28400	.	-	.	ID=gene-C9F00_RS23080;Name=C9F00_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23080;old_locus_tag=C9F00_23615
NZ_PYKC01000157.1	Protein Homology	CDS	28074	28400	.	-	0	ID=cds-WP_001107574.1;Parent=gene-C9F00_RS23080;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9F00_RS23080;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	28400	29119	.	-	.	ID=gene-C9F00_RS23085;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9F00_RS23085;old_locus_tag=C9F00_23620
NZ_PYKC01000157.1	Protein Homology	CDS	28400	29119	.	-	0	ID=cds-WP_000786890.1;Parent=gene-C9F00_RS23085;Dbxref=GenBank:WP_000786890.1;Name=WP_000786890.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=C9F00_RS23085;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786890.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	29274	30326	.	+	.	ID=gene-C9F00_RS23090;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9F00_RS23090;old_locus_tag=C9F00_23630
NZ_PYKC01000157.1	Protein Homology	CDS	29274	30326	.	+	0	ID=cds-WP_001148959.1;Parent=gene-C9F00_RS23090;Dbxref=GenBank:WP_001148959.1;Name=WP_001148959.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9F00_RS23090;product=A/G-specific adenine glycosylase;protein_id=WP_001148959.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	30354	30629	.	+	.	ID=gene-C9F00_RS23095;Name=C9F00_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23095;old_locus_tag=C9F00_23635
NZ_PYKC01000157.1	Protein Homology	CDS	30354	30629	.	+	0	ID=cds-WP_000091706.1;Parent=gene-C9F00_RS23095;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9F00_RS23095;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	30742	31827	.	+	.	ID=gene-C9F00_RS23100;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9F00_RS23100;old_locus_tag=C9F00_23640
NZ_PYKC01000157.1	Protein Homology	CDS	30742	31827	.	+	0	ID=cds-WP_000976289.1;Parent=gene-C9F00_RS23100;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9F00_RS23100;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	32044	33300	.	+	.	ID=gene-C9F00_RS23105;Name=C9F00_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23105;old_locus_tag=C9F00_23645
NZ_PYKC01000157.1	Protein Homology	CDS	32044	33300	.	+	0	ID=cds-WP_001049804.1;Parent=gene-C9F00_RS23105;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9F00_RS23105;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	33362	35497	.	-	.	ID=gene-C9F00_RS23110;Name=C9F00_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23110;old_locus_tag=C9F00_23650
NZ_PYKC01000157.1	Protein Homology	CDS	33362	35497	.	-	0	ID=cds-WP_020899203.1;Parent=gene-C9F00_RS23110;Dbxref=GenBank:WP_020899203.1;Name=WP_020899203.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9F00_RS23110;product=ornithine decarboxylase;protein_id=WP_020899203.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	35923	36630	.	+	.	ID=gene-C9F00_RS23115;Name=C9F00_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23115;old_locus_tag=C9F00_23660
NZ_PYKC01000157.1	Protein Homology	CDS	35923	36630	.	+	0	ID=cds-WP_000234466.1;Parent=gene-C9F00_RS23115;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9F00_RS23115;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	36736	36811	.	+	.	ID=gene-C9F00_RS23120;Name=C9F00_RS23120;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS23120;old_locus_tag=C9F00_23665
NZ_PYKC01000157.1	tRNAscan-SE	tRNA	36736	36811	.	+	.	ID=rna-C9F00_RS23120;Parent=gene-C9F00_RS23120;anticodon=(pos:36769..36771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS23120;product=tRNA-Phe
NZ_PYKC01000157.1	tRNAscan-SE	exon	36736	36811	.	+	.	ID=exon-C9F00_RS23120-1;Parent=rna-C9F00_RS23120;anticodon=(pos:36769..36771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS23120;product=tRNA-Phe
NZ_PYKC01000157.1	RefSeq	pseudogene	36971	37628	.	+	.	ID=gene-C9F00_RS24230;Name=C9F00_RS24230;end_range=37628,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24230;partial=true;pseudo=true
NZ_PYKC01000157.1	Protein Homology	CDS	36971	37628	.	+	0	ID=cds-C9F00_RS24230;Parent=gene-C9F00_RS24230;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=37628,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=C9F00_RS24230;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKC01000157.1	RefSeq	pseudogene	37665	37805	.	+	.	ID=gene-C9F00_RS24235;Name=C9F00_RS24235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24235;old_locus_tag=C9F00_23680;partial=true;pseudo=true;start_range=.,37665
NZ_PYKC01000157.1	Protein Homology	CDS	37665	37805	.	+	0	ID=cds-C9F00_RS24235;Parent=gene-C9F00_RS24235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=C9F00_RS24235;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,37665;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	38904	39221	.	+	.	ID=gene-C9F00_RS23150;Name=C9F00_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23150;old_locus_tag=C9F00_23695
NZ_PYKC01000157.1	Protein Homology	CDS	38904	39221	.	+	0	ID=cds-WP_135369526.1;Parent=gene-C9F00_RS23150;Dbxref=GenBank:WP_135369526.1;Name=WP_135369526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044473.3;locus_tag=C9F00_RS23150;product=PAAR domain-containing protein;protein_id=WP_135369526.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	39218	39484	.	+	.	ID=gene-C9F00_RS23155;Name=C9F00_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23155;old_locus_tag=C9F00_23700
NZ_PYKC01000157.1	Protein Homology	CDS	39218	39484	.	+	0	ID=cds-WP_000768133.1;Parent=gene-C9F00_RS23155;Dbxref=GenBank:WP_000768133.1;Name=WP_000768133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768134.1;locus_tag=C9F00_RS23155;product=STY3281 family bacteriocin immunity protein;protein_id=WP_000768133.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	pseudogene	39506	39712	.	+	.	ID=gene-C9F00_RS24735;Name=C9F00_RS24735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24735;old_locus_tag=C9F00_23705;partial=true;pseudo=true;start_range=.,39506
NZ_PYKC01000157.1	Protein Homology	CDS	39506	39712	.	+	0	ID=cds-C9F00_RS24735;Parent=gene-C9F00_RS24735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044473.3;locus_tag=C9F00_RS24735;partial=true;product=type VI secretion system tube protein TssD;pseudo=true;start_range=.,39506;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	39727	40005	.	+	.	ID=gene-C9F00_RS23165;Name=C9F00_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23165;old_locus_tag=C9F00_23710
NZ_PYKC01000157.1	Protein Homology	CDS	39727	40005	.	+	0	ID=cds-WP_000421096.1;Parent=gene-C9F00_RS23165;Dbxref=GenBank:WP_000421096.1;Name=WP_000421096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729069.1;locus_tag=C9F00_RS23165;product=bacteriocin immunity protein;protein_id=WP_000421096.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	40394	40897	.	+	.	ID=gene-C9F00_RS23170;Name=C9F00_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23170;old_locus_tag=C9F00_23715
NZ_PYKC01000157.1	Protein Homology	CDS	40394	40897	.	+	0	ID=cds-WP_135420218.1;Parent=gene-C9F00_RS23170;Dbxref=GenBank:WP_135420218.1;Name=WP_135420218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151807.1;locus_tag=C9F00_RS23170;product=hypothetical protein;protein_id=WP_135420218.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	pseudogene	41119	41340	.	+	.	ID=gene-C9F00_RS23180;Name=C9F00_RS23180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23180;old_locus_tag=C9F00_23720;pseudo=true
NZ_PYKC01000157.1	Protein Homology	CDS	41119	41340	.	+	0	ID=cds-C9F00_RS23180;Parent=gene-C9F00_RS23180;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023120.6;locus_tag=C9F00_RS23180;product=DUF3289 family protein;pseudo=true;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	41543	42067	.	+	.	ID=gene-C9F00_RS23185;Name=C9F00_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23185;old_locus_tag=C9F00_23725
NZ_PYKC01000157.1	Protein Homology	CDS	41543	42067	.	+	0	ID=cds-WP_001805649.1;Parent=gene-C9F00_RS23185;Dbxref=GenBank:WP_001805649.1;Name=WP_001805649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504929.1;locus_tag=C9F00_RS23185;product=DUF943 family protein;protein_id=WP_001805649.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	42045	42695	.	+	.	ID=gene-C9F00_RS23190;Name=C9F00_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23190;old_locus_tag=C9F00_23730
NZ_PYKC01000157.1	Protein Homology	CDS	42045	42695	.	+	0	ID=cds-WP_039518521.1;Parent=gene-C9F00_RS23190;Dbxref=GenBank:WP_039518521.1;Name=WP_039518521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724403.1;locus_tag=C9F00_RS23190;product=hypothetical protein;protein_id=WP_039518521.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	44129	44812	.	+	.	ID=gene-C9F00_RS23205;Name=C9F00_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23205;old_locus_tag=C9F00_23745
NZ_PYKC01000157.1	Protein Homology	CDS	44129	44812	.	+	0	ID=cds-WP_001275354.1;Parent=gene-C9F00_RS23205;Dbxref=GenBank:WP_001275354.1;Name=WP_001275354.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9F00_RS23205;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275354.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	44917	45474	.	-	.	ID=gene-C9F00_RS23210;Name=C9F00_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23210;old_locus_tag=C9F00_23750
NZ_PYKC01000157.1	Protein Homology	CDS	44917	45474	.	-	0	ID=cds-WP_023237540.1;Parent=gene-C9F00_RS23210;Dbxref=GenBank:WP_023237540.1;Name=WP_023237540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9F00_RS23210;product=DUF3156 family protein;protein_id=WP_023237540.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	45452	46951	.	-	.	ID=gene-C9F00_RS23215;Name=C9F00_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23215;old_locus_tag=C9F00_23755
NZ_PYKC01000157.1	Protein Homology	CDS	45452	46951	.	-	0	ID=cds-WP_000475960.1;Parent=gene-C9F00_RS23215;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9F00_RS23215;product=APC family permease;protein_id=WP_000475960.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	47160	47534	.	-	.	ID=gene-C9F00_RS23220;Name=C9F00_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23220;old_locus_tag=C9F00_23760
NZ_PYKC01000157.1	Protein Homology	CDS	47160	47534	.	-	0	ID=cds-WP_000542980.1;Parent=gene-C9F00_RS23220;Dbxref=GenBank:WP_000542980.1;Name=WP_000542980.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9F00_RS23220;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	47549	48850	.	-	.	ID=gene-C9F00_RS23225;Name=C9F00_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23225;old_locus_tag=C9F00_23765
NZ_PYKC01000157.1	Protein Homology	CDS	47549	48850	.	-	0	ID=cds-WP_001092827.1;Parent=gene-C9F00_RS23225;Dbxref=GenBank:WP_001092827.1;Name=WP_001092827.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9F00_RS23225;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092827.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	49012	50496	.	+	.	ID=gene-C9F00_RS23230;Name=C9F00_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23230;old_locus_tag=C9F00_23770
NZ_PYKC01000157.1	Protein Homology	CDS	49012	50496	.	+	0	ID=cds-WP_135369722.1;Parent=gene-C9F00_RS23230;Dbxref=GenBank:WP_135369722.1;Name=WP_135369722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9F00_RS23230;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_135369722.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	50632	51012	.	-	.	ID=gene-C9F00_RS23235;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9F00_RS23235;old_locus_tag=C9F00_23775
NZ_PYKC01000157.1	Protein Homology	CDS	50632	51012	.	-	0	ID=cds-WP_000988938.1;Parent=gene-C9F00_RS23235;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9F00_RS23235;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	51012	51497	.	-	.	ID=gene-C9F00_RS23240;Name=C9F00_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23240;old_locus_tag=C9F00_23780
NZ_PYKC01000157.1	Protein Homology	CDS	51012	51497	.	-	0	ID=cds-WP_135369721.1;Parent=gene-C9F00_RS23240;Dbxref=GenBank:WP_135369721.1;Name=WP_135369721.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9F00_RS23240;product=Hcp family type VI secretion system effector;protein_id=WP_135369721.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	52223	53146	.	-	.	ID=gene-C9F00_RS23245;Name=C9F00_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23245;old_locus_tag=C9F00_23785
NZ_PYKC01000157.1	Protein Homology	CDS	52223	53146	.	-	0	ID=cds-WP_000540891.1;Parent=gene-C9F00_RS23245;Dbxref=GenBank:WP_000540891.1;Name=WP_000540891.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9F00_RS23245;product=polysaccharide deacetylase family protein;protein_id=WP_000540891.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	53185	54063	.	-	.	ID=gene-C9F00_RS23250;Name=C9F00_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23250;old_locus_tag=C9F00_23790
NZ_PYKC01000157.1	Protein Homology	CDS	53185	54063	.	-	0	ID=cds-WP_031604978.1;Parent=gene-C9F00_RS23250;Dbxref=GenBank:WP_031604978.1;Name=WP_031604978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9F00_RS23250;product=carbon-nitrogen hydrolase family protein;protein_id=WP_031604978.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	54459	55763	.	-	.	ID=gene-C9F00_RS23255;Name=C9F00_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23255;old_locus_tag=C9F00_23795
NZ_PYKC01000157.1	Protein Homology	CDS	54459	55763	.	-	0	ID=cds-WP_000784371.1;Parent=gene-C9F00_RS23255;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9F00_RS23255;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	56168	57352	.	+	.	ID=gene-C9F00_RS23260;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9F00_RS23260;old_locus_tag=C9F00_23800
NZ_PYKC01000157.1	Protein Homology	CDS	56168	57352	.	+	0	ID=cds-WP_000815487.1;Parent=gene-C9F00_RS23260;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9F00_RS23260;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	57463	58935	.	+	.	ID=gene-C9F00_RS23265;Name=C9F00_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23265;old_locus_tag=C9F00_23805
NZ_PYKC01000157.1	Protein Homology	CDS	57463	58935	.	+	0	ID=cds-WP_000437127.1;Parent=gene-C9F00_RS23265;Dbxref=GenBank:WP_000437127.1;Name=WP_000437127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9F00_RS23265;product=fructuronate reductase;protein_id=WP_000437127.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	58947	60359	.	+	.	ID=gene-C9F00_RS23270;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=C9F00_RS23270;old_locus_tag=C9F00_23810
NZ_PYKC01000157.1	Protein Homology	CDS	58947	60359	.	+	0	ID=cds-WP_135369177.1;Parent=gene-C9F00_RS23270;Dbxref=GenBank:WP_135369177.1;Name=WP_135369177.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9F00_RS23270;product=glucuronate isomerase;protein_id=WP_135369177.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	60659	61717	.	-	.	ID=gene-C9F00_RS23275;Name=C9F00_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23275;old_locus_tag=C9F00_23815
NZ_PYKC01000157.1	Protein Homology	CDS	60659	61717	.	-	0	ID=cds-WP_135369176.1;Parent=gene-C9F00_RS23275;Dbxref=GenBank:WP_135369176.1;Name=WP_135369176.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9F00_RS23275;product=methyl-accepting chemotaxis protein;protein_id=WP_135369176.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	62387	64243	.	-	.	ID=gene-C9F00_RS23285;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9F00_RS23285;old_locus_tag=C9F00_23825
NZ_PYKC01000157.1	Protein Homology	CDS	62387	64243	.	-	0	ID=cds-WP_135492551.1;Parent=gene-C9F00_RS23285;Dbxref=GenBank:WP_135492551.1;Name=WP_135492551.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9F00_RS23285;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_135492551.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	64470	65336	.	+	.	ID=gene-C9F00_RS23290;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9F00_RS23290;old_locus_tag=C9F00_23830
NZ_PYKC01000157.1	Protein Homology	CDS	64470	65336	.	+	0	ID=cds-WP_135492553.1;Parent=gene-C9F00_RS23290;Dbxref=GenBank:WP_135492553.1;Name=WP_135492553.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9F00_RS23290;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_135492553.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	65404	66114	.	-	.	ID=gene-C9F00_RS23295;Name=C9F00_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23295;old_locus_tag=C9F00_23835
NZ_PYKC01000157.1	Protein Homology	CDS	65404	66114	.	-	0	ID=cds-WP_001626693.1;Parent=gene-C9F00_RS23295;Dbxref=GenBank:WP_001626693.1;Name=WP_001626693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9F00_RS23295;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001626693.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	66114	67166	.	-	.	ID=gene-C9F00_RS23300;Name=C9F00_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23300;old_locus_tag=C9F00_23840
NZ_PYKC01000157.1	Protein Homology	CDS	66114	67166	.	-	0	ID=cds-WP_023244900.1;Parent=gene-C9F00_RS23300;Dbxref=GenBank:WP_023244900.1;Name=WP_023244900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9F00_RS23300;product=ABC transporter substrate-binding protein;protein_id=WP_023244900.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	67242	67490	.	-	.	ID=gene-C9F00_RS23305;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9F00_RS23305;old_locus_tag=C9F00_23845
NZ_PYKC01000157.1	Protein Homology	CDS	67242	67490	.	-	0	ID=cds-WP_000334887.1;Parent=gene-C9F00_RS23305;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9F00_RS23305;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	67518	67859	.	-	.	ID=gene-C9F00_RS23310;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F00_RS23310;old_locus_tag=C9F00_23850
NZ_PYKC01000157.1	Protein Homology	CDS	67518	67859	.	-	0	ID=cds-WP_000544946.1;Parent=gene-C9F00_RS23310;Dbxref=GenBank:WP_000544946.1;Name=WP_000544946.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9F00_RS23310;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544946.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	67852	68340	.	-	.	ID=gene-C9F00_RS23315;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9F00_RS23315;old_locus_tag=C9F00_23855
NZ_PYKC01000157.1	Protein Homology	CDS	67852	68340	.	-	0	ID=cds-WP_000004951.1;Parent=gene-C9F00_RS23315;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9F00_RS23315;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	68333	68827	.	-	.	ID=gene-C9F00_RS23320;Name=C9F00_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23320;old_locus_tag=C9F00_23860
NZ_PYKC01000157.1	Protein Homology	CDS	68333	68827	.	-	0	ID=cds-WP_001221960.1;Parent=gene-C9F00_RS23320;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9F00_RS23320;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	68827	70530	.	-	.	ID=gene-C9F00_RS23325;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9F00_RS23325;old_locus_tag=C9F00_23865
NZ_PYKC01000157.1	Protein Homology	CDS	68827	70530	.	-	0	ID=cds-WP_135492555.1;Parent=gene-C9F00_RS23325;Dbxref=GenBank:WP_135492555.1;Name=WP_135492555.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9F00_RS23325;product=hydrogenase 2 large subunit;protein_id=WP_135492555.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	70527	71705	.	-	.	ID=gene-C9F00_RS23330;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9F00_RS23330;old_locus_tag=C9F00_23870
NZ_PYKC01000157.1	Protein Homology	CDS	70527	71705	.	-	0	ID=cds-WP_000017678.1;Parent=gene-C9F00_RS23330;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9F00_RS23330;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	71695	72681	.	-	.	ID=gene-C9F00_RS23335;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9F00_RS23335;old_locus_tag=C9F00_23875
NZ_PYKC01000157.1	Protein Homology	CDS	71695	72681	.	-	0	ID=cds-WP_001081721.1;Parent=gene-C9F00_RS23335;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9F00_RS23335;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	72684	73802	.	-	.	ID=gene-C9F00_RS23340;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9F00_RS23340;old_locus_tag=C9F00_23880
NZ_PYKC01000157.1	Protein Homology	CDS	72684	73802	.	-	0	ID=cds-WP_000145429.1;Parent=gene-C9F00_RS23340;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9F00_RS23340;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	73992	74279	.	-	.	ID=gene-C9F00_RS23345;Name=C9F00_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23345;old_locus_tag=C9F00_23890
NZ_PYKC01000157.1	Protein Homology	CDS	73992	74279	.	-	0	ID=cds-WP_001059119.1;Parent=gene-C9F00_RS23345;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9F00_RS23345;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11
NZ_PYKC01000157.1	RefSeq	gene	74364	75829	.	-	.	ID=gene-C9F00_RS23350;Name=C9F00_RS23350;end_range=75829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23350;old_locus_tag=C9F00_23895;partial=true
NZ_PYKC01000157.1	Protein Homology	CDS	74364	75829	.	-	2	ID=cds-WP_135492557.1;Parent=gene-C9F00_RS23350;Dbxref=GenBank:WP_135492557.1;Name=WP_135492557.1;Ontology_term=GO:0007165,GO:0016020;end_range=75829,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F00_RS23350;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_135492557.1;transl_table=11
##sequence-region NZ_PYKC01000083.1 1 2873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000083.1	RefSeq	region	1	2873	.	+	.	ID=NZ_PYKC01000083.1:1..2873;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000083.1	RefSeq	gene	1	2563	.	+	.	ID=gene-C9F00_RS13850;Name=C9F00_RS13850;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F00_RS13850;old_locus_tag=C9F00_14180;partial=true;start_range=.,1
NZ_PYKC01000083.1	cmsearch	rRNA	1	2563	.	+	.	ID=rna-C9F00_RS13850;Parent=gene-C9F00_RS13850;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS13850;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKC01000083.1	cmsearch	exon	1	2563	.	+	.	ID=exon-C9F00_RS13850-1;Parent=rna-C9F00_RS13850;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS13850;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKC01000083.1	RefSeq	gene	2760	2873	.	+	.	ID=gene-C9F00_RS13855;Name=rrf;end_range=2873,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS13855;old_locus_tag=C9F00_14185;partial=true
NZ_PYKC01000083.1	cmsearch	rRNA	2760	2873	.	+	.	ID=rna-C9F00_RS13855;Parent=gene-C9F00_RS13855;Dbxref=RFAM:RF00001;end_range=2873,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS13855;partial=true;product=5S ribosomal RNA
NZ_PYKC01000083.1	cmsearch	exon	2760	2873	.	+	.	ID=exon-C9F00_RS13855-1;Parent=rna-C9F00_RS13855;Dbxref=RFAM:RF00001;end_range=2873,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS13855;partial=true;product=5S ribosomal RNA
##sequence-region NZ_PYKC01000160.1 1 246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000160.1	RefSeq	region	1	246	.	+	.	ID=NZ_PYKC01000160.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000160.1	RefSeq	pseudogene	76	246	.	+	.	ID=gene-C9F00_RS24585;Name=C9F00_RS24585;end_range=246,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24585;partial=true;pseudo=true
NZ_PYKC01000160.1	Protein Homology	CDS	76	246	.	+	0	ID=cds-C9F00_RS24585;Parent=gene-C9F00_RS24585;Note=part of the microcin C transport system%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128718.1;locus_tag=C9F00_RS24585;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000145.1 1 244
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000145.1	RefSeq	region	1	244	.	+	.	ID=NZ_PYKC01000145.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000145.1	RefSeq	pseudogene	1	244	.	-	.	ID=gene-C9F00_RS22050;Name=C9F00_RS22050;end_range=244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22050;old_locus_tag=C9F00_22570;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000145.1	Protein Homology	CDS	1	244	.	-	2	ID=cds-C9F00_RS22050;Parent=gene-C9F00_RS22050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9F00_RS22050;partial=true;product=DNA mismatch repair endonuclease MutL;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000164.1 1 931
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000164.1	RefSeq	region	1	931	.	+	.	ID=NZ_PYKC01000164.1:1..931;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000164.1	RefSeq	pseudogene	1	129	.	-	.	ID=gene-C9F00_RS23495;Name=C9F00_RS23495;end_range=129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23495;old_locus_tag=C9F00_24035;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000164.1	Protein Homology	CDS	1	129	.	-	0	ID=cds-C9F00_RS23495;Parent=gene-C9F00_RS23495;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F00_RS23495;partial=true;product=histidinol-phosphate transaminase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000164.1	RefSeq	gene	392	517	.	+	.	ID=gene-C9F00_RS24670;Name=C9F00_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24670
NZ_PYKC01000164.1	GeneMarkS-2+	CDS	392	517	.	+	0	ID=cds-WP_280954503.1;Parent=gene-C9F00_RS24670;Dbxref=GenBank:WP_280954503.1;Name=WP_280954503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24670;product=hypothetical protein;protein_id=WP_280954503.1;transl_table=11
NZ_PYKC01000164.1	RefSeq	gene	521	931	.	-	.	ID=gene-C9F00_RS23500;Name=C9F00_RS23500;end_range=931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23500;old_locus_tag=C9F00_24040;partial=true
NZ_PYKC01000164.1	Protein Homology	CDS	521	931	.	-	0	ID=cds-WP_245306400.1;Parent=gene-C9F00_RS23500;Dbxref=GenBank:WP_245306400.1;Name=WP_245306400.1;end_range=931,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=C9F00_RS23500;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_245306400.1;transl_table=11
##sequence-region NZ_PYKC01000149.1 1 241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000149.1	RefSeq	region	1	241	.	+	.	ID=NZ_PYKC01000149.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000149.1	RefSeq	gene	95	170	.	-	.	ID=gene-C9F00_RS22300;Name=C9F00_RS22300;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS22300;old_locus_tag=C9F00_22825
NZ_PYKC01000149.1	tRNAscan-SE	tRNA	95	170	.	-	.	ID=rna-C9F00_RS22300;Parent=gene-C9F00_RS22300;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS22300;product=tRNA-Gly
NZ_PYKC01000149.1	tRNAscan-SE	exon	95	170	.	-	.	ID=exon-C9F00_RS22300-1;Parent=rna-C9F00_RS22300;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS22300;product=tRNA-Gly
##sequence-region NZ_PYKC01000120.1 1 2624
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000120.1	RefSeq	region	1	2624	.	+	.	ID=NZ_PYKC01000120.1:1..2624;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000120.1	RefSeq	gene	24	1568	.	+	.	ID=gene-C9F00_RS18380;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9F00_RS18380;old_locus_tag=C9F00_18825
NZ_PYKC01000120.1	Protein Homology	CDS	24	1568	.	+	0	ID=cds-WP_000734249.1;Parent=gene-C9F00_RS18380;Dbxref=GenBank:WP_000734249.1;Name=WP_000734249.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F00_RS18380;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734249.1;transl_table=11
NZ_PYKC01000120.1	RefSeq	gene	1619	2170	.	-	.	ID=gene-C9F00_RS18385;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9F00_RS18385;old_locus_tag=C9F00_18830
NZ_PYKC01000120.1	Protein Homology	CDS	1619	2170	.	-	0	ID=cds-WP_001134566.1;Parent=gene-C9F00_RS18385;Dbxref=GenBank:WP_001134566.1;Name=WP_001134566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9F00_RS18385;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11
NZ_PYKC01000120.1	RefSeq	pseudogene	2195	2624	.	-	.	ID=gene-C9F00_RS18390;Name=C9F00_RS18390;end_range=2624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18390;old_locus_tag=C9F00_18835;partial=true;pseudo=true
NZ_PYKC01000120.1	Protein Homology	CDS	2195	2624	.	-	1	ID=cds-C9F00_RS18390;Parent=gene-C9F00_RS18390;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2624,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9F00_RS18390;partial=true;product=acid phosphatase AphA;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000155.1 1 74510
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000155.1	RefSeq	region	1	74510	.	+	.	ID=NZ_PYKC01000155.1:1..74510;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000155.1	RefSeq	gene	56	1174	.	+	.	ID=gene-C9F00_RS22565;Name=C9F00_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22565;old_locus_tag=C9F00_23100
NZ_PYKC01000155.1	Protein Homology	CDS	56	1174	.	+	0	ID=cds-WP_000842135.1;Parent=gene-C9F00_RS22565;Dbxref=GenBank:WP_000842135.1;Name=WP_000842135.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F00_RS22565;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842135.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	1343	2968	.	+	.	ID=gene-C9F00_RS22575;Name=C9F00_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22575;old_locus_tag=C9F00_23110
NZ_PYKC01000155.1	Protein Homology	CDS	1343	2968	.	+	0	ID=cds-WP_000528481.1;Parent=gene-C9F00_RS22575;Dbxref=GenBank:WP_000528481.1;Name=WP_000528481.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F00_RS22575;product=methyl-accepting chemotaxis protein;protein_id=WP_000528481.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	3029	3952	.	-	.	ID=gene-C9F00_RS22580;Name=C9F00_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22580;old_locus_tag=C9F00_23115
NZ_PYKC01000155.1	Protein Homology	CDS	3029	3952	.	-	0	ID=cds-WP_000414259.1;Parent=gene-C9F00_RS22580;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9F00_RS22580;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	4245	5588	.	+	.	ID=gene-C9F00_RS22585;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=C9F00_RS22585;old_locus_tag=C9F00_23120
NZ_PYKC01000155.1	Protein Homology	CDS	4245	5588	.	+	0	ID=cds-WP_000024092.1;Parent=gene-C9F00_RS22585;Dbxref=GenBank:WP_000024092.1;Name=WP_000024092.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F00_RS22585;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024092.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	5637	7145	.	+	.	ID=gene-C9F00_RS22590;Name=C9F00_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22590;old_locus_tag=C9F00_23125
NZ_PYKC01000155.1	Protein Homology	CDS	5637	7145	.	+	0	ID=cds-WP_135369480.1;Parent=gene-C9F00_RS22590;Dbxref=GenBank:WP_135369480.1;Name=WP_135369480.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F00_RS22590;product=carboxylesterase/lipase family protein;protein_id=WP_135369480.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	7365	9020	.	+	.	ID=gene-C9F00_RS22595;Name=C9F00_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22595;old_locus_tag=C9F00_23130
NZ_PYKC01000155.1	Protein Homology	CDS	7365	9020	.	+	0	ID=cds-WP_135369481.1;Parent=gene-C9F00_RS22595;Dbxref=GenBank:WP_135369481.1;Name=WP_135369481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9F00_RS22595;product=glucan biosynthesis protein D;protein_id=WP_135369481.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	9216	9791	.	+	.	ID=gene-C9F00_RS22600;Name=C9F00_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22600;old_locus_tag=C9F00_23135
NZ_PYKC01000155.1	Protein Homology	CDS	9216	9791	.	+	0	ID=cds-WP_135369482.1;Parent=gene-C9F00_RS22600;Dbxref=GenBank:WP_135369482.1;Name=WP_135369482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9F00_RS22600;product=YceI family protein;protein_id=WP_135369482.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	9803	11005	.	+	.	ID=gene-C9F00_RS22605;Name=C9F00_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22605;old_locus_tag=C9F00_23140
NZ_PYKC01000155.1	Protein Homology	CDS	9803	11005	.	+	0	ID=cds-WP_135369487.1;Parent=gene-C9F00_RS22605;Dbxref=GenBank:WP_135369487.1;Name=WP_135369487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9F00_RS22605;product=lactate oxidase;protein_id=WP_135369487.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	11052	11489	.	-	.	ID=gene-C9F00_RS22610;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9F00_RS22610;old_locus_tag=C9F00_23145
NZ_PYKC01000155.1	Protein Homology	CDS	11052	11489	.	-	0	ID=cds-WP_135369483.1;Parent=gene-C9F00_RS22610;Dbxref=GenBank:WP_135369483.1;Name=WP_135369483.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9F00_RS22610;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_135369483.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	11489	12280	.	-	.	ID=gene-C9F00_RS22615;Name=C9F00_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22615;old_locus_tag=C9F00_23150
NZ_PYKC01000155.1	Protein Homology	CDS	11489	12280	.	-	0	ID=cds-WP_001670738.1;Parent=gene-C9F00_RS22615;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9F00_RS22615;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	12296	12928	.	-	.	ID=gene-C9F00_RS22620;Name=C9F00_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22620;old_locus_tag=C9F00_23155
NZ_PYKC01000155.1	Protein Homology	CDS	12296	12928	.	-	0	ID=cds-WP_135369484.1;Parent=gene-C9F00_RS22620;Dbxref=GenBank:WP_135369484.1;Name=WP_135369484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9F00_RS22620;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_135369484.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	12940	13377	.	-	.	ID=gene-C9F00_RS22625;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9F00_RS22625;old_locus_tag=C9F00_23160
NZ_PYKC01000155.1	Protein Homology	CDS	12940	13377	.	-	0	ID=cds-WP_000606458.1;Parent=gene-C9F00_RS22625;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9F00_RS22625;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	13509	14315	.	-	.	ID=gene-C9F00_RS22630;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9F00_RS22630;old_locus_tag=C9F00_23165
NZ_PYKC01000155.1	Protein Homology	CDS	13509	14315	.	-	0	ID=cds-WP_135492543.1;Parent=gene-C9F00_RS22630;Dbxref=GenBank:WP_135492543.1;Name=WP_135492543.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9F00_RS22630;product=BtpA family protein SgcQ;protein_id=WP_135492543.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	14329	15642	.	-	.	ID=gene-C9F00_RS22635;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=C9F00_RS22635;old_locus_tag=C9F00_23170
NZ_PYKC01000155.1	Protein Homology	CDS	14329	15642	.	-	0	ID=cds-WP_045717713.1;Parent=gene-C9F00_RS22635;Dbxref=GenBank:WP_045717713.1;Name=WP_045717713.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F00_RS22635;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_045717713.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	15653	15934	.	-	.	ID=gene-C9F00_RS22640;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9F00_RS22640;old_locus_tag=C9F00_23175
NZ_PYKC01000155.1	Protein Homology	CDS	15653	15934	.	-	0	ID=cds-WP_000976132.1;Parent=gene-C9F00_RS22640;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9F00_RS22640;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	15931	17049	.	-	.	ID=gene-C9F00_RS22645;Name=C9F00_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22645;old_locus_tag=C9F00_23180
NZ_PYKC01000155.1	Protein Homology	CDS	15931	17049	.	-	0	ID=cds-WP_000144629.1;Parent=gene-C9F00_RS22645;Dbxref=GenBank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9F00_RS22645;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	17266	17805	.	+	.	ID=gene-C9F00_RS22650;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9F00_RS22650;old_locus_tag=C9F00_23185
NZ_PYKC01000155.1	Protein Homology	CDS	17266	17805	.	+	0	ID=cds-WP_000229311.1;Parent=gene-C9F00_RS22650;Dbxref=GenBank:WP_000229311.1;Name=WP_000229311.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9F00_RS22650;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229311.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	17802	18782	.	-	.	ID=gene-C9F00_RS22655;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9F00_RS22655;old_locus_tag=C9F00_23190
NZ_PYKC01000155.1	Protein Homology	CDS	17802	18782	.	-	0	ID=cds-WP_079840361.1;Parent=gene-C9F00_RS22655;Dbxref=GenBank:WP_079840361.1;Name=WP_079840361.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9F00_RS22655;product=YdcK family protein;protein_id=WP_079840361.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	18889	19902	.	+	.	ID=gene-C9F00_RS22660;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9F00_RS22660;old_locus_tag=C9F00_23195
NZ_PYKC01000155.1	Protein Homology	CDS	18889	19902	.	+	0	ID=cds-WP_061378143.1;Parent=gene-C9F00_RS22660;Dbxref=GenBank:WP_061378143.1;Name=WP_061378143.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9F00_RS22660;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_061378143.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	19889	20485	.	+	.	ID=gene-C9F00_RS22665;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9F00_RS22665;old_locus_tag=C9F00_23200
NZ_PYKC01000155.1	Protein Homology	CDS	19889	20485	.	+	0	ID=cds-WP_000218276.1;Parent=gene-C9F00_RS22665;Dbxref=GenBank:WP_000218276.1;Name=WP_000218276.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9F00_RS22665;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218276.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	20641	21309	.	+	.	ID=gene-C9F00_RS22670;Name=C9F00_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22670;old_locus_tag=C9F00_23205
NZ_PYKC01000155.1	Protein Homology	CDS	20641	21309	.	+	0	ID=cds-WP_001259025.1;Parent=gene-C9F00_RS22670;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9F00_RS22670;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	21363	22541	.	-	.	ID=gene-C9F00_RS22675;Name=C9F00_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22675;old_locus_tag=C9F00_23210
NZ_PYKC01000155.1	Protein Homology	CDS	21363	22541	.	-	0	ID=cds-WP_135369485.1;Parent=gene-C9F00_RS22675;Dbxref=GenBank:WP_135369485.1;Name=WP_135369485.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9F00_RS22675;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_135369485.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	22634	23170	.	+	.	ID=gene-C9F00_RS22680;Name=C9F00_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22680;old_locus_tag=C9F00_23215
NZ_PYKC01000155.1	Protein Homology	CDS	22634	23170	.	+	0	ID=cds-WP_135369486.1;Parent=gene-C9F00_RS22680;Dbxref=GenBank:WP_135369486.1;Name=WP_135369486.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9F00_RS22680;product=helix-turn-helix domain-containing protein;protein_id=WP_135369486.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	23249	25213	.	+	.	ID=gene-C9F00_RS22685;Name=C9F00_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22685;old_locus_tag=C9F00_23220
NZ_PYKC01000155.1	Protein Homology	CDS	23249	25213	.	+	0	ID=cds-WP_031605316.1;Parent=gene-C9F00_RS22685;Dbxref=GenBank:WP_031605316.1;Name=WP_031605316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9F00_RS22685;product=peptidase U32 family protein;protein_id=WP_031605316.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	25214	25444	.	-	.	ID=gene-C9F00_RS22690;Name=C9F00_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22690;old_locus_tag=C9F00_23225
NZ_PYKC01000155.1	Protein Homology	CDS	25214	25444	.	-	0	ID=cds-WP_000956438.1;Parent=gene-C9F00_RS22690;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9F00_RS22690;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	25717	26667	.	-	.	ID=gene-C9F00_RS22695;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9F00_RS22695;old_locus_tag=C9F00_23230
NZ_PYKC01000155.1	Protein Homology	CDS	25717	26667	.	-	0	ID=cds-WP_135369778.1;Parent=gene-C9F00_RS22695;Dbxref=GenBank:WP_135369778.1;Name=WP_135369778.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9F00_RS22695;product=SPI-2 type III secretion system effector SifB;protein_id=WP_135369778.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	27182	27580	.	+	.	ID=gene-C9F00_RS22700;Name=C9F00_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22700;old_locus_tag=C9F00_23235
NZ_PYKC01000155.1	Protein Homology	CDS	27182	27580	.	+	0	ID=cds-WP_023227527.1;Parent=gene-C9F00_RS22700;Dbxref=GenBank:WP_023227527.1;Name=WP_023227527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9F00_RS22700;product=hypothetical protein;protein_id=WP_023227527.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	27613	27843	.	+	.	ID=gene-C9F00_RS22705;Name=C9F00_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22705;old_locus_tag=C9F00_23240
NZ_PYKC01000155.1	Protein Homology	CDS	27613	27843	.	+	0	ID=cds-WP_135369594.1;Parent=gene-C9F00_RS22705;Dbxref=GenBank:WP_135369594.1;Name=WP_135369594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9F00_RS22705;product=hypothetical protein;protein_id=WP_135369594.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	28103	28873	.	+	.	ID=gene-C9F00_RS22710;Name=C9F00_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22710;old_locus_tag=C9F00_23245
NZ_PYKC01000155.1	Protein Homology	CDS	28103	28873	.	+	0	ID=cds-WP_135369595.1;Parent=gene-C9F00_RS22710;Dbxref=GenBank:WP_135369595.1;Name=WP_135369595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9F00_RS22710;product=M15 family metallopeptidase;protein_id=WP_135369595.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	29009	30433	.	+	.	ID=gene-C9F00_RS22715;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=C9F00_RS22715;old_locus_tag=C9F00_23250
NZ_PYKC01000155.1	Protein Homology	CDS	29009	30433	.	+	0	ID=cds-WP_000760692.1;Parent=gene-C9F00_RS22715;Dbxref=GenBank:WP_000760692.1;Name=WP_000760692.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9F00_RS22715;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760692.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	30548	31993	.	+	.	ID=gene-C9F00_RS22720;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9F00_RS22720;old_locus_tag=C9F00_23255
NZ_PYKC01000155.1	Protein Homology	CDS	30548	31993	.	+	0	ID=cds-WP_135369596.1;Parent=gene-C9F00_RS22720;Dbxref=GenBank:WP_135369596.1;Name=WP_135369596.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9F00_RS22720;product=aminobutyraldehyde dehydrogenase;protein_id=WP_135369596.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	32098	32193	.	-	.	ID=gene-C9F00_RS22725;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9F00_RS22725;old_locus_tag=C9F00_23260
NZ_PYKC01000155.1	Protein Homology	CDS	32098	32193	.	-	0	ID=cds-WP_001103198.1;Parent=gene-C9F00_RS22725;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9F00_RS22725;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	32392	32565	.	+	.	ID=gene-C9F00_RS22730;Name=C9F00_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22730;old_locus_tag=C9F00_23265
NZ_PYKC01000155.1	Protein Homology	CDS	32392	32565	.	+	0	ID=cds-WP_000171943.1;Parent=gene-C9F00_RS22730;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9F00_RS22730;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	32610	34754	.	-	.	ID=gene-C9F00_RS22735;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=C9F00_RS22735;old_locus_tag=C9F00_23270
NZ_PYKC01000155.1	Protein Homology	CDS	32610	34754	.	-	0	ID=cds-WP_135369597.1;Parent=gene-C9F00_RS22735;Dbxref=GenBank:WP_135369597.1;Name=WP_135369597.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9F00_RS22735;product=virulence-associated effector SrfC;protein_id=WP_135369597.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	34751	37732	.	-	.	ID=gene-C9F00_RS22740;Name=C9F00_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22740;old_locus_tag=C9F00_23275
NZ_PYKC01000155.1	Protein Homology	CDS	34751	37732	.	-	0	ID=cds-WP_045341132.1;Parent=gene-C9F00_RS22740;Dbxref=GenBank:WP_045341132.1;Name=WP_045341132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=C9F00_RS22740;product=virulence factor SrfB;protein_id=WP_045341132.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	37737	39062	.	-	.	ID=gene-C9F00_RS22745;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=C9F00_RS22745;old_locus_tag=C9F00_23280
NZ_PYKC01000155.1	Protein Homology	CDS	37737	39062	.	-	0	ID=cds-WP_023236809.1;Parent=gene-C9F00_RS22745;Dbxref=GenBank:WP_023236809.1;Name=WP_023236809.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F00_RS22745;product=virulence-associated effector SrfA;protein_id=WP_023236809.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	39286	39519	.	+	.	ID=gene-C9F00_RS22750;Name=C9F00_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22750;old_locus_tag=C9F00_23285
NZ_PYKC01000155.1	Protein Homology	CDS	39286	39519	.	+	0	ID=cds-WP_000018720.1;Parent=gene-C9F00_RS22750;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9F00_RS22750;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	39524	39973	.	-	.	ID=gene-C9F00_RS22755;Name=C9F00_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22755;old_locus_tag=C9F00_23290
NZ_PYKC01000155.1	Protein Homology	CDS	39524	39973	.	-	0	ID=cds-WP_001076571.1;Parent=gene-C9F00_RS22755;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9F00_RS22755;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	39973	40488	.	-	.	ID=gene-C9F00_RS22760;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9F00_RS22760;old_locus_tag=C9F00_23295
NZ_PYKC01000155.1	Protein Homology	CDS	39973	40488	.	-	0	ID=cds-WP_079951826.1;Parent=gene-C9F00_RS22760;Dbxref=GenBank:WP_079951826.1;Name=WP_079951826.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9F00_RS22760;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_079951826.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	40712	41749	.	+	.	ID=gene-C9F00_RS22765;Name=C9F00_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22765;old_locus_tag=C9F00_23300
NZ_PYKC01000155.1	Protein Homology	CDS	40712	41749	.	+	0	ID=cds-WP_135369598.1;Parent=gene-C9F00_RS22765;Dbxref=GenBank:WP_135369598.1;Name=WP_135369598.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9F00_RS22765;product=NADP-dependent oxidoreductase;protein_id=WP_135369598.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	42083	42748	.	+	.	ID=gene-C9F00_RS22770;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9F00_RS22770;old_locus_tag=C9F00_23305
NZ_PYKC01000155.1	Protein Homology	CDS	42083	42748	.	+	0	ID=cds-WP_001119592.1;Parent=gene-C9F00_RS22770;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9F00_RS22770;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	42804	44924	.	-	.	ID=gene-C9F00_RS22775;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=C9F00_RS22775;old_locus_tag=C9F00_23310
NZ_PYKC01000155.1	Protein Homology	CDS	42804	44924	.	-	0	ID=cds-WP_135369599.1;Parent=gene-C9F00_RS22775;Dbxref=GenBank:WP_135369599.1;Name=WP_135369599.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9F00_RS22775;product=TonB-dependent receptor PqqU;protein_id=WP_135369599.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	45188	46249	.	+	.	ID=gene-C9F00_RS22780;Name=C9F00_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22780;old_locus_tag=C9F00_23315
NZ_PYKC01000155.1	Protein Homology	CDS	45188	46249	.	+	0	ID=cds-WP_135369600.1;Parent=gene-C9F00_RS22780;Dbxref=GenBank:WP_135369600.1;Name=WP_135369600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9F00_RS22780;product=YncE family protein;protein_id=WP_135369600.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	46394	46615	.	+	.	ID=gene-C9F00_RS22785;Name=C9F00_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22785;old_locus_tag=C9F00_23320
NZ_PYKC01000155.1	Protein Homology	CDS	46394	46615	.	+	0	ID=cds-WP_000732362.1;Parent=gene-C9F00_RS22785;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9F00_RS22785;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	46692	48185	.	-	.	ID=gene-C9F00_RS22790;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9F00_RS22790;old_locus_tag=C9F00_23325
NZ_PYKC01000155.1	Protein Homology	CDS	46692	48185	.	-	0	ID=cds-WP_000857110.1;Parent=gene-C9F00_RS22790;Dbxref=GenBank:WP_000857110.1;Name=WP_000857110.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9F00_RS22790;product=L-asparagine permease;protein_id=WP_000857110.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	48698	49330	.	+	.	ID=gene-C9F00_RS22800;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9F00_RS22800;old_locus_tag=C9F00_23335
NZ_PYKC01000155.1	Protein Homology	CDS	48698	49330	.	+	0	ID=cds-WP_135369601.1;Parent=gene-C9F00_RS22800;Dbxref=GenBank:WP_135369601.1;Name=WP_135369601.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9F00_RS22800;product=type III secretion system effector SteA;protein_id=WP_135369601.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	49614	50459	.	+	.	ID=gene-C9F00_RS22805;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9F00_RS22805;old_locus_tag=C9F00_23340
NZ_PYKC01000155.1	Protein Homology	CDS	49614	50459	.	+	0	ID=cds-WP_000200329.1;Parent=gene-C9F00_RS22805;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9F00_RS22805;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	50495	51388	.	-	.	ID=gene-C9F00_RS22810;Name=C9F00_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22810;old_locus_tag=C9F00_23345
NZ_PYKC01000155.1	Protein Homology	CDS	50495	51388	.	-	0	ID=cds-WP_135369602.1;Parent=gene-C9F00_RS22810;Dbxref=GenBank:WP_135369602.1;Name=WP_135369602.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9F00_RS22810;product=PhzF family isomerase;protein_id=WP_135369602.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	51494	52174	.	-	.	ID=gene-C9F00_RS22815;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F00_RS22815;old_locus_tag=C9F00_23350
NZ_PYKC01000155.1	Protein Homology	CDS	51494	52174	.	-	0	ID=cds-WP_000617106.1;Parent=gene-C9F00_RS22815;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9F00_RS22815;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	52171	52866	.	-	.	ID=gene-C9F00_RS22820;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9F00_RS22820;old_locus_tag=C9F00_23355
NZ_PYKC01000155.1	Protein Homology	CDS	52171	52866	.	-	0	ID=cds-WP_001166287.1;Parent=gene-C9F00_RS22820;Dbxref=GenBank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9F00_RS22820;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	52866	54410	.	-	.	ID=gene-C9F00_RS22825;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F00_RS22825;old_locus_tag=C9F00_23360
NZ_PYKC01000155.1	Protein Homology	CDS	52866	54410	.	-	0	ID=cds-WP_135369603.1;Parent=gene-C9F00_RS22825;Dbxref=GenBank:WP_135369603.1;Name=WP_135369603.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9F00_RS22825;product=nitrate reductase subunit beta;protein_id=WP_135369603.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	54407	58147	.	-	.	ID=gene-C9F00_RS22830;Name=C9F00_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22830;old_locus_tag=C9F00_23365
NZ_PYKC01000155.1	Protein Homology	CDS	54407	58147	.	-	0	ID=cds-WP_135369604.1;Parent=gene-C9F00_RS22830;Dbxref=GenBank:WP_135369604.1;Name=WP_135369604.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9F00_RS22830;product=nitrate reductase subunit alpha;protein_id=WP_135369604.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	58239	59627	.	-	.	ID=gene-C9F00_RS22835;Name=C9F00_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22835;old_locus_tag=C9F00_23370
NZ_PYKC01000155.1	Protein Homology	CDS	58239	59627	.	-	0	ID=cds-WP_000198250.1;Parent=gene-C9F00_RS22835;Dbxref=GenBank:WP_000198250.1;Name=WP_000198250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9F00_RS22835;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198250.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	59842	60420	.	-	.	ID=gene-C9F00_RS22840;Name=C9F00_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22840;old_locus_tag=C9F00_23375
NZ_PYKC01000155.1	Protein Homology	CDS	59842	60420	.	-	0	ID=cds-WP_000121037.1;Parent=gene-C9F00_RS22840;Dbxref=GenBank:WP_000121037.1;Name=WP_000121037.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9F00_RS22840;product=TetR family transcriptional regulator;protein_id=WP_000121037.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	60538	62025	.	+	.	ID=gene-C9F00_RS22845;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9F00_RS22845;old_locus_tag=C9F00_23380
NZ_PYKC01000155.1	Protein Homology	CDS	60538	62025	.	+	0	ID=cds-WP_000489740.1;Parent=gene-C9F00_RS22845;Dbxref=GenBank:WP_000489740.1;Name=WP_000489740.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9F00_RS22845;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489740.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	62050	62430	.	-	.	ID=gene-C9F00_RS22850;Name=C9F00_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22850;old_locus_tag=C9F00_23385
NZ_PYKC01000155.1	Protein Homology	CDS	62050	62430	.	-	0	ID=cds-WP_014343841.1;Parent=gene-C9F00_RS22850;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9F00_RS22850;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	62574	63662	.	-	.	ID=gene-C9F00_RS22855;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F00_RS22855;old_locus_tag=C9F00_23390
NZ_PYKC01000155.1	Protein Homology	CDS	62574	63662	.	-	0	ID=cds-WP_000769035.1;Parent=gene-C9F00_RS22855;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F00_RS22855;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	64187	65068	.	-	.	ID=gene-C9F00_RS22865;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=C9F00_RS22865;old_locus_tag=C9F00_23400
NZ_PYKC01000155.1	Protein Homology	CDS	64187	65068	.	-	0	ID=cds-WP_063809242.1;Parent=gene-C9F00_RS22865;Dbxref=GenBank:WP_063809242.1;Name=WP_063809242.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9F00_RS22865;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_063809242.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	65346	68393	.	+	.	ID=gene-C9F00_RS22875;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9F00_RS22875;old_locus_tag=C9F00_23410
NZ_PYKC01000155.1	Protein Homology	CDS	65346	68393	.	+	0	ID=cds-WP_077684034.1;Parent=gene-C9F00_RS22875;Dbxref=GenBank:WP_077684034.1;Name=WP_077684034.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F00_RS22875;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077684034.1;transl_except=(pos:65931..65933%2Caa:Sec);transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	68407	69291	.	+	.	ID=gene-C9F00_RS22880;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F00_RS22880;old_locus_tag=C9F00_23415
NZ_PYKC01000155.1	Protein Homology	CDS	68407	69291	.	+	0	ID=cds-WP_000061599.1;Parent=gene-C9F00_RS22880;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9F00_RS22880;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	69284	69940	.	+	.	ID=gene-C9F00_RS22885;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9F00_RS22885;old_locus_tag=C9F00_23420
NZ_PYKC01000155.1	Protein Homology	CDS	69284	69940	.	+	0	ID=cds-WP_000045657.1;Parent=gene-C9F00_RS22885;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9F00_RS22885;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	70031	71041	.	-	.	ID=gene-C9F00_RS22890;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9F00_RS22890;old_locus_tag=C9F00_23425
NZ_PYKC01000155.1	Protein Homology	CDS	70031	71041	.	-	0	ID=cds-WP_000642447.1;Parent=gene-C9F00_RS22890;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9F00_RS22890;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	71327	73024	.	-	.	ID=gene-C9F00_RS22895;Name=C9F00_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22895;old_locus_tag=C9F00_23430
NZ_PYKC01000155.1	Protein Homology	CDS	71327	73024	.	-	0	ID=cds-WP_000450511.1;Parent=gene-C9F00_RS22895;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F00_RS22895;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	73201	73344	.	-	.	ID=gene-C9F00_RS22900;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9F00_RS22900;old_locus_tag=C9F00_23435
NZ_PYKC01000155.1	Protein Homology	CDS	73201	73344	.	-	0	ID=cds-WP_000841559.1;Parent=gene-C9F00_RS22900;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9F00_RS22900;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	gene	73439	73654	.	-	.	ID=gene-C9F00_RS22905;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9F00_RS22905;old_locus_tag=C9F00_23440
NZ_PYKC01000155.1	Protein Homology	CDS	73439	73654	.	-	0	ID=cds-WP_000495700.1;Parent=gene-C9F00_RS22905;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9F00_RS22905;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11
NZ_PYKC01000155.1	RefSeq	pseudogene	74166	74465	.	+	.	ID=gene-C9F00_RS22910;Name=C9F00_RS22910;end_range=74465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22910;old_locus_tag=C9F00_23445;partial=true;pseudo=true
NZ_PYKC01000155.1	Protein Homology	CDS	74166	74465	.	+	0	ID=cds-C9F00_RS22910;Parent=gene-C9F00_RS22910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;end_range=74465,.;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9F00_RS22910;partial=true;product=OsmC family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000121.1 1 239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000121.1	RefSeq	region	1	239	.	+	.	ID=NZ_PYKC01000121.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000121.1	RefSeq	pseudogene	1	198	.	+	.	ID=gene-C9F00_RS18395;Name=C9F00_RS18395;end_range=198,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18395;old_locus_tag=C9F00_18840;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000121.1	Protein Homology	CDS	1	198	.	+	0	ID=cds-C9F00_RS18395;Parent=gene-C9F00_RS18395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9F00_RS18395;partial=true;product=capsule biosynthesis GfcC family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000130.1 1 2535
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000130.1	RefSeq	region	1	2535	.	+	.	ID=NZ_PYKC01000130.1:1..2535;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000130.1	RefSeq	pseudogene	1	424	.	-	.	ID=gene-C9F00_RS19610;Name=C9F00_RS19610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19610;old_locus_tag=C9F00_20075;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000130.1	Protein Homology	CDS	1	424	.	-	0	ID=cds-C9F00_RS19610;Parent=gene-C9F00_RS19610;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9F00_RS19610;partial=true;product=lysine-sensitive aspartokinase 3;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000130.1	RefSeq	gene	769	2418	.	+	.	ID=gene-C9F00_RS19615;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9F00_RS19615;old_locus_tag=C9F00_20080
NZ_PYKC01000130.1	Protein Homology	CDS	769	2418	.	+	0	ID=cds-WP_000790028.1;Parent=gene-C9F00_RS19615;Dbxref=GenBank:WP_000790028.1;Name=WP_000790028.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9F00_RS19615;product=glucose-6-phosphate isomerase;protein_id=WP_000790028.1;transl_table=11
##sequence-region NZ_PYKC01000133.1 1 2464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000133.1	RefSeq	region	1	2464	.	+	.	ID=NZ_PYKC01000133.1:1..2464;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000133.1	RefSeq	gene	1	79	.	+	.	ID=gene-C9F00_RS24885;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS24885;partial=true;start_range=.,1
NZ_PYKC01000133.1	cmsearch	rRNA	1	79	.	+	.	ID=rna-C9F00_RS24885;Parent=gene-C9F00_RS24885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24885;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000133.1	cmsearch	exon	1	79	.	+	.	ID=exon-C9F00_RS24885-1;Parent=rna-C9F00_RS24885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24885;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000133.1	RefSeq	gene	374	811	.	-	.	ID=gene-C9F00_RS20325;Name=C9F00_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20325;old_locus_tag=C9F00_20795
NZ_PYKC01000133.1	Protein Homology	CDS	374	811	.	-	0	ID=cds-WP_000973248.1;Parent=gene-C9F00_RS20325;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9F00_RS20325;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11
NZ_PYKC01000133.1	RefSeq	gene	968	1897	.	+	.	ID=gene-C9F00_RS20330;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9F00_RS20330;old_locus_tag=C9F00_20800
NZ_PYKC01000133.1	Protein Homology	CDS	968	1897	.	+	0	ID=cds-WP_001122767.1;Parent=gene-C9F00_RS20330;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9F00_RS20330;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11
NZ_PYKC01000133.1	RefSeq	pseudogene	2166	2464	.	+	.	ID=gene-C9F00_RS20335;Name=C9F00_RS20335;end_range=2464,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS20335;old_locus_tag=C9F00_20805;partial=true;pseudo=true
NZ_PYKC01000133.1	Protein Homology	CDS	2166	2464	.	+	0	ID=cds-C9F00_RS20335;Parent=gene-C9F00_RS20335;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9F00_RS20335;partial=true;product=malate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000150.1 1 2461
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000150.1	RefSeq	region	1	2461	.	+	.	ID=NZ_PYKC01000150.1:1..2461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000150.1	RefSeq	gene	1	2461	.	-	.	ID=gene-C9F00_RS22305;Name=adhE;end_range=2461,.;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=C9F00_RS22305;old_locus_tag=C9F00_22830;partial=true;start_range=.,1
NZ_PYKC01000150.1	Protein Homology	CDS	1	2461	.	-	2	ID=cds-WP_135369212.1;Parent=gene-C9F00_RS22305;Dbxref=GenBank:WP_135369212.1;Name=WP_135369212.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;end_range=2461,.;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9F00_RS22305;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_135369212.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000076.1 1 72251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000076.1	RefSeq	region	1	72251	.	+	.	ID=NZ_PYKC01000076.1:1..72251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000076.1	RefSeq	gene	1	723	.	+	.	ID=gene-C9F00_RS12875;Name=C9F00_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12875;old_locus_tag=C9F00_13190;partial=true;start_range=.,1
NZ_PYKC01000076.1	Protein Homology	CDS	1	723	.	+	0	ID=cds-WP_135492323.1;Parent=gene-C9F00_RS12875;Dbxref=GenBank:WP_135492323.1;Name=WP_135492323.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9F00_RS12875;partial=true;product=ion channel protein;protein_id=WP_135492323.1;start_range=.,1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	743	2395	.	-	.	ID=gene-C9F00_RS12880;Name=C9F00_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12880;old_locus_tag=C9F00_13195
NZ_PYKC01000076.1	Protein Homology	CDS	743	2395	.	-	0	ID=cds-WP_135369208.1;Parent=gene-C9F00_RS12880;Dbxref=GenBank:WP_135369208.1;Name=WP_135369208.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9F00_RS12880;product=alpha-keto acid decarboxylase family protein;protein_id=WP_135369208.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	2575	3573	.	+	.	ID=gene-C9F00_RS12890;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9F00_RS12890;old_locus_tag=C9F00_13205
NZ_PYKC01000076.1	Protein Homology	CDS	2575	3573	.	+	0	ID=cds-WP_135369209.1;Parent=gene-C9F00_RS12890;Dbxref=GenBank:WP_135369209.1;Name=WP_135369209.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9F00_RS12890;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_135369209.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	3687	4013	.	+	.	ID=gene-C9F00_RS12895;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=C9F00_RS12895;old_locus_tag=C9F00_13210
NZ_PYKC01000076.1	Protein Homology	CDS	3687	4013	.	+	0	ID=cds-WP_135369210.1;Parent=gene-C9F00_RS12895;Dbxref=GenBank:WP_135369210.1;Name=WP_135369210.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9F00_RS12895;product=DUF2502 domain-containing protein YpeC;protein_id=WP_135369210.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	4074	5315	.	-	.	ID=gene-C9F00_RS12900;Name=C9F00_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12900;old_locus_tag=C9F00_13215
NZ_PYKC01000076.1	Protein Homology	CDS	4074	5315	.	-	0	ID=cds-WP_000131734.1;Parent=gene-C9F00_RS12900;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9F00_RS12900;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	5308	5385	.	-	.	ID=gene-C9F00_RS24830;Name=C9F00_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24830
NZ_PYKC01000076.1	Protein Homology	CDS	5308	5385	.	-	0	ID=cds-WP_418144572.1;Parent=gene-C9F00_RS24830;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=C9F00_RS24830;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	5658	6860	.	+	.	ID=gene-C9F00_RS12905;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9F00_RS12905;old_locus_tag=C9F00_13220
NZ_PYKC01000076.1	Protein Homology	CDS	5658	6860	.	+	0	ID=cds-WP_000376347.1;Parent=gene-C9F00_RS12905;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9F00_RS12905;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	6913	9102	.	-	.	ID=gene-C9F00_RS12910;Name=C9F00_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12910;old_locus_tag=C9F00_13225
NZ_PYKC01000076.1	Protein Homology	CDS	6913	9102	.	-	0	ID=cds-WP_001112947.1;Parent=gene-C9F00_RS12910;Dbxref=GenBank:WP_001112947.1;Name=WP_001112947.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9F00_RS12910;product=EAL domain-containing protein;protein_id=WP_001112947.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	9293	9368	.	-	.	ID=gene-C9F00_RS12915;Name=C9F00_RS12915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS12915;old_locus_tag=C9F00_13230
NZ_PYKC01000076.1	tRNAscan-SE	tRNA	9293	9368	.	-	.	ID=rna-C9F00_RS12915;Parent=gene-C9F00_RS12915;anticodon=(pos:complement(9333..9335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12915;product=tRNA-Ala
NZ_PYKC01000076.1	tRNAscan-SE	exon	9293	9368	.	-	.	ID=exon-C9F00_RS12915-1;Parent=rna-C9F00_RS12915;anticodon=(pos:complement(9333..9335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12915;product=tRNA-Ala
NZ_PYKC01000076.1	RefSeq	gene	9590	9952	.	+	.	ID=gene-C9F00_RS12920;Name=C9F00_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12920;old_locus_tag=C9F00_13240
NZ_PYKC01000076.1	Protein Homology	CDS	9590	9952	.	+	0	ID=cds-WP_000472034.1;Parent=gene-C9F00_RS12920;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9F00_RS12920;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	9954	10346	.	+	.	ID=gene-C9F00_RS12925;Name=C9F00_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12925;old_locus_tag=C9F00_13245
NZ_PYKC01000076.1	Protein Homology	CDS	9954	10346	.	+	0	ID=cds-WP_000826515.1;Parent=gene-C9F00_RS12925;Dbxref=GenBank:WP_000826515.1;Name=WP_000826515.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9F00_RS12925;product=MerR family transcriptional regulator;protein_id=WP_000826515.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	10400	11815	.	-	.	ID=gene-C9F00_RS12930;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9F00_RS12930;old_locus_tag=C9F00_13250
NZ_PYKC01000076.1	Protein Homology	CDS	10400	11815	.	-	0	ID=cds-WP_000695623.1;Parent=gene-C9F00_RS12930;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9F00_RS12930;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	12074	12149	.	+	.	ID=gene-C9F00_RS12935;Name=C9F00_RS12935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS12935;old_locus_tag=C9F00_13255
NZ_PYKC01000076.1	tRNAscan-SE	tRNA	12074	12149	.	+	.	ID=rna-C9F00_RS12935;Parent=gene-C9F00_RS12935;anticodon=(pos:12107..12109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12935;product=tRNA-Val
NZ_PYKC01000076.1	tRNAscan-SE	exon	12074	12149	.	+	.	ID=exon-C9F00_RS12935-1;Parent=rna-C9F00_RS12935;anticodon=(pos:12107..12109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12935;product=tRNA-Val
NZ_PYKC01000076.1	RefSeq	gene	12195	12270	.	+	.	ID=gene-C9F00_RS12940;Name=C9F00_RS12940;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS12940;old_locus_tag=C9F00_13260
NZ_PYKC01000076.1	tRNAscan-SE	tRNA	12195	12270	.	+	.	ID=rna-C9F00_RS12940;Parent=gene-C9F00_RS12940;anticodon=(pos:12228..12230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12940;product=tRNA-Val
NZ_PYKC01000076.1	tRNAscan-SE	exon	12195	12270	.	+	.	ID=exon-C9F00_RS12940-1;Parent=rna-C9F00_RS12940;anticodon=(pos:12228..12230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12940;product=tRNA-Val
NZ_PYKC01000076.1	RefSeq	gene	12275	12350	.	+	.	ID=gene-C9F00_RS12945;Name=C9F00_RS12945;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS12945;old_locus_tag=C9F00_13265
NZ_PYKC01000076.1	tRNAscan-SE	tRNA	12275	12350	.	+	.	ID=rna-C9F00_RS12945;Parent=gene-C9F00_RS12945;anticodon=(pos:12308..12310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12945;product=tRNA-Lys
NZ_PYKC01000076.1	tRNAscan-SE	exon	12275	12350	.	+	.	ID=exon-C9F00_RS12945-1;Parent=rna-C9F00_RS12945;anticodon=(pos:12308..12310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS12945;product=tRNA-Lys
NZ_PYKC01000076.1	RefSeq	gene	12373	12506	.	+	.	ID=gene-C9F00_RS12950;Name=C9F00_RS12950;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS12950;old_locus_tag=C9F00_13270
NZ_PYKC01000076.1	cmsearch	ncRNA	12373	12506	.	+	.	ID=rna-C9F00_RS12950;Parent=gene-C9F00_RS12950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS12950;product=RtT sRNA
NZ_PYKC01000076.1	cmsearch	exon	12373	12506	.	+	.	ID=exon-C9F00_RS12950-1;Parent=rna-C9F00_RS12950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS12950;product=RtT sRNA
NZ_PYKC01000076.1	RefSeq	gene	12698	13582	.	-	.	ID=gene-C9F00_RS12955;Name=C9F00_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12955;old_locus_tag=C9F00_13275
NZ_PYKC01000076.1	Protein Homology	CDS	12698	13582	.	-	0	ID=cds-WP_000438890.1;Parent=gene-C9F00_RS12955;Dbxref=GenBank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9F00_RS12955;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	13634	13792	.	-	.	ID=gene-C9F00_RS12960;Name=C9F00_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12960;old_locus_tag=C9F00_13280
NZ_PYKC01000076.1	Protein Homology	CDS	13634	13792	.	-	0	ID=cds-WP_000658727.1;Parent=gene-C9F00_RS12960;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9F00_RS12960;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	13851	15107	.	-	.	ID=gene-C9F00_RS12965;Name=C9F00_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12965;old_locus_tag=C9F00_13285
NZ_PYKC01000076.1	Protein Homology	CDS	13851	15107	.	-	0	ID=cds-WP_000513241.1;Parent=gene-C9F00_RS12965;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9F00_RS12965;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	15162	15995	.	-	.	ID=gene-C9F00_RS12970;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9F00_RS12970;old_locus_tag=C9F00_13290
NZ_PYKC01000076.1	Protein Homology	CDS	15162	15995	.	-	0	ID=cds-WP_001119755.1;Parent=gene-C9F00_RS12970;Dbxref=GenBank:WP_001119755.1;Name=WP_001119755.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9F00_RS12970;product=xanthosine phosphorylase;protein_id=WP_001119755.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	16251	17012	.	+	.	ID=gene-C9F00_RS12975;Name=C9F00_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12975;old_locus_tag=C9F00_13295
NZ_PYKC01000076.1	Protein Homology	CDS	16251	17012	.	+	0	ID=cds-WP_000722930.1;Parent=gene-C9F00_RS12975;Dbxref=GenBank:WP_000722930.1;Name=WP_000722930.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9F00_RS12975;product=outer membrane protein OmpK;protein_id=WP_000722930.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	17074	18000	.	-	.	ID=gene-C9F00_RS12980;Name=C9F00_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12980;old_locus_tag=C9F00_13300
NZ_PYKC01000076.1	Protein Homology	CDS	17074	18000	.	-	0	ID=cds-WP_001109835.1;Parent=gene-C9F00_RS12980;Dbxref=GenBank:WP_001109835.1;Name=WP_001109835.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9F00_RS12980;product=LysR family transcriptional regulator;protein_id=WP_001109835.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	18090	19088	.	+	.	ID=gene-C9F00_RS12985;Name=C9F00_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12985;old_locus_tag=C9F00_13305
NZ_PYKC01000076.1	Protein Homology	CDS	18090	19088	.	+	0	ID=cds-WP_135492325.1;Parent=gene-C9F00_RS12985;Dbxref=GenBank:WP_135492325.1;Name=WP_135492325.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9F00_RS12985;product=bile acid:sodium symporter family protein;protein_id=WP_135492325.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	19085	19303	.	-	.	ID=gene-C9F00_RS12990;Name=C9F00_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12990;old_locus_tag=C9F00_13310
NZ_PYKC01000076.1	Protein Homology	CDS	19085	19303	.	-	0	ID=cds-WP_001519708.1;Parent=gene-C9F00_RS12990;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9F00_RS12990;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	19305	21320	.	-	.	ID=gene-C9F00_RS12995;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F00_RS12995;old_locus_tag=C9F00_13315
NZ_PYKC01000076.1	Protein Homology	CDS	19305	21320	.	-	0	ID=cds-WP_135369687.1;Parent=gene-C9F00_RS12995;Dbxref=GenBank:WP_135369687.1;Name=WP_135369687.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9F00_RS12995;product=NAD-dependent DNA ligase LigA;protein_id=WP_135369687.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	21392	22378	.	-	.	ID=gene-C9F00_RS13000;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9F00_RS13000;old_locus_tag=C9F00_13320
NZ_PYKC01000076.1	Protein Homology	CDS	21392	22378	.	-	0	ID=cds-WP_000983126.1;Parent=gene-C9F00_RS13000;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9F00_RS13000;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	22610	23371	.	+	.	ID=gene-C9F00_RS13005;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9F00_RS13005;old_locus_tag=C9F00_13325
NZ_PYKC01000076.1	Protein Homology	CDS	22610	23371	.	+	0	ID=cds-WP_000255008.1;Parent=gene-C9F00_RS13005;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9F00_RS13005;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	23535	24506	.	+	.	ID=gene-C9F00_RS13010;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9F00_RS13010;old_locus_tag=C9F00_13330
NZ_PYKC01000076.1	Protein Homology	CDS	23535	24506	.	+	0	ID=cds-WP_000036904.1;Parent=gene-C9F00_RS13010;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F00_RS13010;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	24890	25147	.	+	.	ID=gene-C9F00_RS13015;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9F00_RS13015;old_locus_tag=C9F00_13335
NZ_PYKC01000076.1	Protein Homology	CDS	24890	25147	.	+	0	ID=cds-WP_000487600.1;Parent=gene-C9F00_RS13015;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9F00_RS13015;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	25196	26923	.	+	.	ID=gene-C9F00_RS13020;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9F00_RS13020;old_locus_tag=C9F00_13340
NZ_PYKC01000076.1	Protein Homology	CDS	25196	26923	.	+	0	ID=cds-WP_135369686.1;Parent=gene-C9F00_RS13020;Dbxref=GenBank:WP_135369686.1;Name=WP_135369686.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=C9F00_RS13020;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_135369686.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	26964	27473	.	+	.	ID=gene-C9F00_RS13025;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9F00_RS13025;old_locus_tag=C9F00_13345
NZ_PYKC01000076.1	Protein Homology	CDS	26964	27473	.	+	0	ID=cds-WP_000522253.1;Parent=gene-C9F00_RS13025;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9F00_RS13025;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	27623	27862	.	-	.	ID=gene-C9F00_RS13030;Name=C9F00_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13030;old_locus_tag=C9F00_13350
NZ_PYKC01000076.1	Protein Homology	CDS	27623	27862	.	-	0	ID=cds-WP_135369685.1;Parent=gene-C9F00_RS13030;Dbxref=GenBank:WP_135369685.1;Name=WP_135369685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9F00_RS13030;product=cytoplasmic protein;protein_id=WP_135369685.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	27859	28725	.	-	.	ID=gene-C9F00_RS13035;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9F00_RS13035;old_locus_tag=C9F00_13355
NZ_PYKC01000076.1	Protein Homology	CDS	27859	28725	.	-	0	ID=cds-WP_135492327.1;Parent=gene-C9F00_RS13035;Dbxref=GenBank:WP_135492327.1;Name=WP_135492327.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9F00_RS13035;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_135492327.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	28808	30100	.	+	.	ID=gene-C9F00_RS13040;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9F00_RS13040;old_locus_tag=C9F00_13360
NZ_PYKC01000076.1	Protein Homology	CDS	28808	30100	.	+	0	ID=cds-WP_135369684.1;Parent=gene-C9F00_RS13040;Dbxref=GenBank:WP_135369684.1;Name=WP_135369684.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9F00_RS13040;product=transcriptional regulator PtsJ;protein_id=WP_135369684.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	30115	30834	.	+	.	ID=gene-C9F00_RS13045;Name=C9F00_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13045;old_locus_tag=C9F00_13365
NZ_PYKC01000076.1	Protein Homology	CDS	30115	30834	.	+	0	ID=cds-WP_001263761.1;Parent=gene-C9F00_RS13045;Dbxref=GenBank:WP_001263761.1;Name=WP_001263761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9F00_RS13045;product=GMP synthase;protein_id=WP_001263761.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	30893	31273	.	+	.	ID=gene-C9F00_RS13050;Name=C9F00_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13050;old_locus_tag=C9F00_13370
NZ_PYKC01000076.1	Protein Homology	CDS	30893	31273	.	+	0	ID=cds-WP_000710729.1;Parent=gene-C9F00_RS13050;Dbxref=GenBank:WP_000710729.1;Name=WP_000710729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9F00_RS13050;product=YfeK family protein;protein_id=WP_000710729.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	31286	31825	.	+	.	ID=gene-C9F00_RS13055;Name=C9F00_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13055;old_locus_tag=C9F00_13375
NZ_PYKC01000076.1	Protein Homology	CDS	31286	31825	.	+	0	ID=cds-WP_001119689.1;Parent=gene-C9F00_RS13055;Dbxref=GenBank:WP_001119689.1;Name=WP_001119689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9F00_RS13055;product=transglycosylase domain-containing protein;protein_id=WP_001119689.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	31956	32867	.	-	.	ID=gene-C9F00_RS13065;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9F00_RS13065;old_locus_tag=C9F00_13385
NZ_PYKC01000076.1	Protein Homology	CDS	31956	32867	.	-	0	ID=cds-WP_135369683.1;Parent=gene-C9F00_RS13065;Dbxref=GenBank:WP_135369683.1;Name=WP_135369683.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9F00_RS13065;product=cysteine synthase CysM;protein_id=WP_135369683.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	32935	34032	.	-	.	ID=gene-C9F00_RS13070;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9F00_RS13070;old_locus_tag=C9F00_13390
NZ_PYKC01000076.1	Protein Homology	CDS	32935	34032	.	-	0	ID=cds-WP_000021076.1;Parent=gene-C9F00_RS13070;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9F00_RS13070;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	34022	34897	.	-	.	ID=gene-C9F00_RS13075;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9F00_RS13075;old_locus_tag=C9F00_13395
NZ_PYKC01000076.1	Protein Homology	CDS	34022	34897	.	-	0	ID=cds-WP_000852705.1;Parent=gene-C9F00_RS13075;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9F00_RS13075;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	34897	35730	.	-	.	ID=gene-C9F00_RS13080;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=C9F00_RS13080;old_locus_tag=C9F00_13400
NZ_PYKC01000076.1	Protein Homology	CDS	34897	35730	.	-	0	ID=cds-WP_135369682.1;Parent=gene-C9F00_RS13080;Dbxref=GenBank:WP_135369682.1;Name=WP_135369682.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9F00_RS13080;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_135369682.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	35730	36746	.	-	.	ID=gene-C9F00_RS13085;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9F00_RS13085;old_locus_tag=C9F00_13405
NZ_PYKC01000076.1	Protein Homology	CDS	35730	36746	.	-	0	ID=cds-WP_135369681.1;Parent=gene-C9F00_RS13085;Dbxref=GenBank:WP_135369681.1;Name=WP_135369681.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9F00_RS13085;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_135369681.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	36904	37695	.	-	.	ID=gene-C9F00_RS13090;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9F00_RS13090;old_locus_tag=C9F00_13410
NZ_PYKC01000076.1	Protein Homology	CDS	36904	37695	.	-	0	ID=cds-WP_000517460.1;Parent=gene-C9F00_RS13090;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9F00_RS13090;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	37943	38842	.	-	.	ID=gene-C9F00_RS13095;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=C9F00_RS13095;old_locus_tag=C9F00_13415
NZ_PYKC01000076.1	Protein Homology	CDS	37943	38842	.	-	0	ID=cds-WP_000084583.1;Parent=gene-C9F00_RS13095;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9F00_RS13095;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	38937	39512	.	-	.	ID=gene-C9F00_RS13100;Name=C9F00_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13100;old_locus_tag=C9F00_13420
NZ_PYKC01000076.1	Protein Homology	CDS	38937	39512	.	-	0	ID=cds-WP_000838971.1;Parent=gene-C9F00_RS13100;Dbxref=GenBank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9F00_RS13100;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	39574	40023	.	-	.	ID=gene-C9F00_RS13105;Name=C9F00_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13105;old_locus_tag=C9F00_13425
NZ_PYKC01000076.1	Protein Homology	CDS	39574	40023	.	-	0	ID=cds-WP_031605647.1;Parent=gene-C9F00_RS13105;Dbxref=GenBank:WP_031605647.1;Name=WP_031605647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9F00_RS13105;product=DUF2919 domain-containing protein;protein_id=WP_031605647.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	40010	40435	.	-	.	ID=gene-C9F00_RS13110;Name=C9F00_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13110;old_locus_tag=C9F00_13430
NZ_PYKC01000076.1	Protein Homology	CDS	40010	40435	.	-	0	ID=cds-WP_000406008.1;Parent=gene-C9F00_RS13110;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9F00_RS13110;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	40648	41517	.	+	.	ID=gene-C9F00_RS13115;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9F00_RS13115;old_locus_tag=C9F00_13435
NZ_PYKC01000076.1	Protein Homology	CDS	40648	41517	.	+	0	ID=cds-WP_000102880.1;Parent=gene-C9F00_RS13115;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9F00_RS13115;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	41520	42419	.	+	.	ID=gene-C9F00_RS13120;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9F00_RS13120;old_locus_tag=C9F00_13440
NZ_PYKC01000076.1	Protein Homology	CDS	41520	42419	.	+	0	ID=cds-WP_000801330.1;Parent=gene-C9F00_RS13120;Dbxref=GenBank:WP_000801330.1;Name=WP_000801330.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9F00_RS13120;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801330.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	42440	42769	.	+	.	ID=gene-C9F00_RS13125;Name=C9F00_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13125;old_locus_tag=C9F00_13445
NZ_PYKC01000076.1	Protein Homology	CDS	42440	42769	.	+	0	ID=cds-WP_001194345.1;Parent=gene-C9F00_RS13125;Dbxref=GenBank:WP_001194345.1;Name=WP_001194345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9F00_RS13125;product=hypothetical protein;protein_id=WP_001194345.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	42898	44175	.	+	.	ID=gene-C9F00_RS13130;Name=C9F00_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13130;old_locus_tag=C9F00_13450
NZ_PYKC01000076.1	Protein Homology	CDS	42898	44175	.	+	0	ID=cds-WP_079839934.1;Parent=gene-C9F00_RS13130;Dbxref=GenBank:WP_079839934.1;Name=WP_079839934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=C9F00_RS13130;product=DUF1963 domain-containing protein;protein_id=WP_079839934.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	44375	45427	.	-	.	ID=gene-C9F00_RS13140;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9F00_RS13140;old_locus_tag=C9F00_13460
NZ_PYKC01000076.1	Protein Homology	CDS	44375	45427	.	-	0	ID=cds-WP_000753665.1;Parent=gene-C9F00_RS13140;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9F00_RS13140;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	45475	45969	.	-	.	ID=gene-C9F00_RS13145;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9F00_RS13145;old_locus_tag=C9F00_13465
NZ_PYKC01000076.1	Protein Homology	CDS	45475	45969	.	-	0	ID=cds-WP_000606266.1;Parent=gene-C9F00_RS13145;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9F00_RS13145;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	45982	46641	.	-	.	ID=gene-C9F00_RS13150;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9F00_RS13150;old_locus_tag=C9F00_13470
NZ_PYKC01000076.1	Protein Homology	CDS	45982	46641	.	-	0	ID=cds-WP_001111056.1;Parent=gene-C9F00_RS13150;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9F00_RS13150;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	46651	47547	.	-	.	ID=gene-C9F00_RS13155;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9F00_RS13155;old_locus_tag=C9F00_13475
NZ_PYKC01000076.1	Protein Homology	CDS	46651	47547	.	-	0	ID=cds-WP_000372354.1;Parent=gene-C9F00_RS13155;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9F00_RS13155;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	47566	48927	.	-	.	ID=gene-C9F00_RS13160;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=C9F00_RS13160;old_locus_tag=C9F00_13480
NZ_PYKC01000076.1	Protein Homology	CDS	47566	48927	.	-	0	ID=cds-WP_000769990.1;Parent=gene-C9F00_RS13160;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9F00_RS13160;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	48939	50342	.	-	.	ID=gene-C9F00_RS13165;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9F00_RS13165;old_locus_tag=C9F00_13485
NZ_PYKC01000076.1	Protein Homology	CDS	48939	50342	.	-	0	ID=cds-WP_001097526.1;Parent=gene-C9F00_RS13165;Dbxref=GenBank:WP_001097526.1;Name=WP_001097526.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9F00_RS13165;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097526.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	50339	51565	.	-	.	ID=gene-C9F00_RS13170;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9F00_RS13170;old_locus_tag=C9F00_13490
NZ_PYKC01000076.1	Protein Homology	CDS	50339	51565	.	-	0	ID=cds-WP_000512345.1;Parent=gene-C9F00_RS13170;Dbxref=GenBank:WP_000512345.1;Name=WP_000512345.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9F00_RS13170;product=ethanolamine utilization protein EutH;protein_id=WP_000512345.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	51685	52872	.	-	.	ID=gene-C9F00_RS13175;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9F00_RS13175;old_locus_tag=C9F00_13495
NZ_PYKC01000076.1	Protein Homology	CDS	51685	52872	.	-	0	ID=cds-WP_001147505.1;Parent=gene-C9F00_RS13175;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9F00_RS13175;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	52862	53701	.	-	.	ID=gene-C9F00_RS13180;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9F00_RS13180;old_locus_tag=C9F00_13500
NZ_PYKC01000076.1	Protein Homology	CDS	52862	53701	.	-	0	ID=cds-WP_135369680.1;Parent=gene-C9F00_RS13180;Dbxref=GenBank:WP_135369680.1;Name=WP_135369680.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9F00_RS13180;product=ethanolamine utilization protein EutJ;protein_id=WP_135369680.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	53712	55115	.	-	.	ID=gene-C9F00_RS13185;Name=C9F00_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13185;old_locus_tag=C9F00_13505
NZ_PYKC01000076.1	Protein Homology	CDS	53712	55115	.	-	0	ID=cds-WP_058653377.1;Parent=gene-C9F00_RS13185;Dbxref=GenBank:WP_058653377.1;Name=WP_058653377.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F00_RS13185;product=aldehyde dehydrogenase family protein;protein_id=WP_058653377.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	55127	55414	.	-	.	ID=gene-C9F00_RS13190;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9F00_RS13190;old_locus_tag=C9F00_13510
NZ_PYKC01000076.1	Protein Homology	CDS	55127	55414	.	-	0	ID=cds-WP_001522340.1;Parent=gene-C9F00_RS13190;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9F00_RS13190;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	55527	55817	.	-	.	ID=gene-C9F00_RS13195;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9F00_RS13195;old_locus_tag=C9F00_13515
NZ_PYKC01000076.1	Protein Homology	CDS	55527	55817	.	-	0	ID=cds-WP_000387716.1;Parent=gene-C9F00_RS13195;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9F00_RS13195;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	55858	56874	.	-	.	ID=gene-C9F00_RS13200;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9F00_RS13200;old_locus_tag=C9F00_13520
NZ_PYKC01000076.1	Protein Homology	CDS	55858	56874	.	-	0	ID=cds-WP_000582929.1;Parent=gene-C9F00_RS13200;Dbxref=GenBank:WP_000582929.1;Name=WP_000582929.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9F00_RS13200;product=phosphate acetyltransferase;protein_id=WP_000582929.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	56871	57674	.	-	.	ID=gene-C9F00_RS13205;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9F00_RS13205;old_locus_tag=C9F00_13525
NZ_PYKC01000076.1	Protein Homology	CDS	56871	57674	.	-	0	ID=cds-WP_000997656.1;Parent=gene-C9F00_RS13205;Dbxref=GenBank:WP_000997656.1;Name=WP_000997656.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9F00_RS13205;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997656.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	57671	58360	.	-	.	ID=gene-C9F00_RS13210;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9F00_RS13210;old_locus_tag=C9F00_13530
NZ_PYKC01000076.1	Protein Homology	CDS	57671	58360	.	-	0	ID=cds-WP_000733867.1;Parent=gene-C9F00_RS13210;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9F00_RS13210;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	58338	58817	.	-	.	ID=gene-C9F00_RS13215;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9F00_RS13215;old_locus_tag=C9F00_13535
NZ_PYKC01000076.1	Protein Homology	CDS	58338	58817	.	-	0	ID=cds-WP_000820751.1;Parent=gene-C9F00_RS13215;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9F00_RS13215;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	58830	59165	.	-	.	ID=gene-C9F00_RS13220;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9F00_RS13220;old_locus_tag=C9F00_13540
NZ_PYKC01000076.1	Protein Homology	CDS	58830	59165	.	-	0	ID=cds-WP_001031445.1;Parent=gene-C9F00_RS13220;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9F00_RS13220;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	59583	61862	.	-	.	ID=gene-C9F00_RS13225;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9F00_RS13225;old_locus_tag=C9F00_13545
NZ_PYKC01000076.1	Protein Homology	CDS	59583	61862	.	-	0	ID=cds-WP_000344299.1;Parent=gene-C9F00_RS13225;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9F00_RS13225;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	62134	63084	.	+	.	ID=gene-C9F00_RS13230;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F00_RS13230;old_locus_tag=C9F00_13555
NZ_PYKC01000076.1	Protein Homology	CDS	62134	63084	.	+	0	ID=cds-WP_001072436.1;Parent=gene-C9F00_RS13230;Dbxref=GenBank:WP_001072436.1;Name=WP_001072436.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9F00_RS13230;product=transaldolase;protein_id=WP_001072436.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	63104	65104	.	+	.	ID=gene-C9F00_RS13235;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9F00_RS13235;old_locus_tag=C9F00_13560
NZ_PYKC01000076.1	Protein Homology	CDS	63104	65104	.	+	0	ID=cds-WP_135369679.1;Parent=gene-C9F00_RS13235;Dbxref=GenBank:WP_135369679.1;Name=WP_135369679.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F00_RS13235;product=transketolase;protein_id=WP_135369679.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	65167	65397	.	-	.	ID=gene-C9F00_RS13240;Name=C9F00_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13240;old_locus_tag=C9F00_13565
NZ_PYKC01000076.1	Protein Homology	CDS	65167	65397	.	-	0	ID=cds-WP_000700635.1;Parent=gene-C9F00_RS13240;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9F00_RS13240;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	65525	66568	.	-	.	ID=gene-C9F00_RS13245;Name=C9F00_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13245;old_locus_tag=C9F00_13570
NZ_PYKC01000076.1	Protein Homology	CDS	65525	66568	.	-	0	ID=cds-WP_001270668.1;Parent=gene-C9F00_RS13245;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9F00_RS13245;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	66693	67268	.	-	.	ID=gene-C9F00_RS13250;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9F00_RS13250;old_locus_tag=C9F00_13575
NZ_PYKC01000076.1	Protein Homology	CDS	66693	67268	.	-	0	ID=cds-WP_000084037.1;Parent=gene-C9F00_RS13250;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9F00_RS13250;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	67472	68770	.	+	.	ID=gene-C9F00_RS13255;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9F00_RS13255;old_locus_tag=C9F00_13580
NZ_PYKC01000076.1	Protein Homology	CDS	67472	68770	.	+	0	ID=cds-WP_000673295.1;Parent=gene-C9F00_RS13255;Dbxref=GenBank:WP_000673295.1;Name=WP_000673295.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9F00_RS13255;product=penicillin binding protein PBP4B;protein_id=WP_000673295.1;transl_table=11
NZ_PYKC01000076.1	RefSeq	pseudogene	69218	71178	.	-	.	ID=gene-C9F00_RS13260;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=pseudogene;locus_tag=C9F00_RS13260;old_locus_tag=C9F00_13585;pseudo=true
NZ_PYKC01000076.1	Protein Homology	CDS	69218	71178	.	-	0	ID=cds-C9F00_RS13260;Parent=gene-C9F00_RS13260;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9F00_RS13260;product=formate-dependent uric acid utilization protein AegA;pseudo=true;transl_table=11
NZ_PYKC01000076.1	RefSeq	gene	71364	72251	.	+	.	ID=gene-C9F00_RS13265;Name=C9F00_RS13265;end_range=72251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13265;old_locus_tag=C9F00_13595;partial=true
NZ_PYKC01000076.1	Protein Homology	CDS	71364	72251	.	+	0	ID=cds-WP_135492329.1;Parent=gene-C9F00_RS13265;Dbxref=GenBank:WP_135492329.1;Name=WP_135492329.1;end_range=72251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9F00_RS13265;partial=true;product=type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein;protein_id=WP_135492329.1;transl_table=11
##sequence-region NZ_PYKC01000163.1 1 233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000163.1	RefSeq	region	1	233	.	+	.	ID=NZ_PYKC01000163.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000163.1	RefSeq	pseudogene	1	233	.	-	.	ID=gene-C9F00_RS24920;Name=C9F00_RS24920;end_range=233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24920;old_locus_tag=C9F00_24030;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000163.1	Protein Homology	CDS	1	233	.	-	1	ID=cds-C9F00_RS24920;Parent=gene-C9F00_RS24920;Note=cytochrome c-type biogenesis protein%3B involved in the attachment of heme to cytochrome c%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238335.1;locus_tag=C9F00_RS24920;partial=true;product=cytochrome c biogenesis protein CcmH;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000168.1 1 2337
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000168.1	RefSeq	region	1	2337	.	+	.	ID=NZ_PYKC01000168.1:1..2337;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000168.1	RefSeq	pseudogene	745	2166	.	+	.	ID=gene-C9F00_RS23545;Name=C9F00_RS23545;end_range=2166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23545;old_locus_tag=C9F00_24085;partial=true;pseudo=true
NZ_PYKC01000168.1	Protein Homology	CDS	745	2166	.	+	0	ID=cds-C9F00_RS23545;Parent=gene-C9F00_RS23545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2166,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039533.5;locus_tag=C9F00_RS23545;partial=true;product=Ig-like domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000168.1	RefSeq	pseudogene	2212	2337	.	+	.	ID=gene-C9F00_RS24935;Name=C9F00_RS24935;end_range=2337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24935;partial=true;pseudo=true;start_range=.,2212
NZ_PYKC01000168.1	Protein Homology	CDS	2212	2337	.	+	0	ID=cds-C9F00_RS24935;Parent=gene-C9F00_RS24935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461918.1;locus_tag=C9F00_RS24935;partial=true;product=thymidylate synthase;pseudo=true;start_range=.,2212;transl_table=11
##sequence-region NZ_PYKC01000131.1 1 72208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000131.1	RefSeq	region	1	72208	.	+	.	ID=NZ_PYKC01000131.1:1..72208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000131.1	RefSeq	gene	1	263	.	+	.	ID=gene-C9F00_RS19620;Name=C9F00_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19620;old_locus_tag=C9F00_20085;partial=true;start_range=.,1
NZ_PYKC01000131.1	Protein Homology	CDS	1	263	.	+	2	ID=cds-WP_135492462.1;Parent=gene-C9F00_RS19620;Dbxref=GenBank:WP_135492462.1;Name=WP_135492462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F00_RS19620;partial=true;product=DUF4440 domain-containing protein;protein_id=WP_135492462.1;start_range=.,1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	319	2886	.	-	.	ID=gene-C9F00_RS19625;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9F00_RS19625;old_locus_tag=C9F00_20090
NZ_PYKC01000131.1	Protein Homology	CDS	319	2886	.	-	0	ID=cds-WP_001005807.1;Parent=gene-C9F00_RS19625;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9F00_RS19625;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	3044	3565	.	+	.	ID=gene-C9F00_RS19630;Name=C9F00_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19630;old_locus_tag=C9F00_20095
NZ_PYKC01000131.1	Protein Homology	CDS	3044	3565	.	+	0	ID=cds-WP_135369062.1;Parent=gene-C9F00_RS19630;Dbxref=GenBank:WP_135369062.1;Name=WP_135369062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9F00_RS19630;product=cytoplasmic protein;protein_id=WP_135369062.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	3737	4393	.	-	.	ID=gene-C9F00_RS19635;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9F00_RS19635;old_locus_tag=C9F00_20100
NZ_PYKC01000131.1	Protein Homology	CDS	3737	4393	.	-	0	ID=cds-WP_000420451.1;Parent=gene-C9F00_RS19635;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9F00_RS19635;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	pseudogene	4728	4946	.	+	.	ID=gene-C9F00_RS19645;Name=C9F00_RS19645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19645;old_locus_tag=C9F00_20110;partial=true;pseudo=true;start_range=.,4728
NZ_PYKC01000131.1	Protein Homology	CDS	4728	4946	.	+	0	ID=cds-C9F00_RS19645;Parent=gene-C9F00_RS19645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=C9F00_RS19645;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4728;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	5019	5546	.	-	.	ID=gene-C9F00_RS19650;Name=C9F00_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19650;old_locus_tag=C9F00_20115
NZ_PYKC01000131.1	Protein Homology	CDS	5019	5546	.	-	0	ID=cds-WP_000971655.1;Parent=gene-C9F00_RS19650;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9F00_RS19650;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	5543	5833	.	-	.	ID=gene-C9F00_RS19655;Name=C9F00_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19655;old_locus_tag=C9F00_20120
NZ_PYKC01000131.1	Protein Homology	CDS	5543	5833	.	-	0	ID=cds-WP_000855694.1;Parent=gene-C9F00_RS19655;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9F00_RS19655;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	pseudogene	6103	6292	.	-	.	ID=gene-C9F00_RS19660;Name=C9F00_RS19660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19660;old_locus_tag=C9F00_20125;partial=true;pseudo=true;start_range=.,6103
NZ_PYKC01000131.1	Protein Homology	CDS	6103	6292	.	-	0	ID=cds-C9F00_RS19660;Parent=gene-C9F00_RS19660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9F00_RS19660;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,6103;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	6533	6859	.	+	.	ID=gene-C9F00_RS19665;Name=C9F00_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19665;old_locus_tag=C9F00_20130
NZ_PYKC01000131.1	Protein Homology	CDS	6533	6859	.	+	0	ID=cds-WP_000393300.1;Parent=gene-C9F00_RS19665;Dbxref=GenBank:WP_000393300.1;Name=WP_000393300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9F00_RS19665;product=hypothetical protein;protein_id=WP_000393300.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	7132	7479	.	-	.	ID=gene-C9F00_RS19670;Name=C9F00_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19670;old_locus_tag=C9F00_20135
NZ_PYKC01000131.1	Protein Homology	CDS	7132	7479	.	-	0	ID=cds-WP_135369355.1;Parent=gene-C9F00_RS19670;Dbxref=GenBank:WP_135369355.1;Name=WP_135369355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9F00_RS19670;product=DUF1493 family protein;protein_id=WP_135369355.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	pseudogene	7464	7913	.	-	.	ID=gene-C9F00_RS19675;Name=C9F00_RS19675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19675;old_locus_tag=C9F00_20140;pseudo=true
NZ_PYKC01000131.1	Protein Homology	CDS	7464	7913	.	-	0	ID=cds-C9F00_RS19675;Parent=gene-C9F00_RS19675;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9F00_RS19675;product=STM2901 family protein;pseudo=true;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	8345	8788	.	-	.	ID=gene-C9F00_RS19680;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9F00_RS19680;old_locus_tag=C9F00_20145
NZ_PYKC01000131.1	Protein Homology	CDS	8345	8788	.	-	0	ID=cds-WP_000715096.1;Parent=gene-C9F00_RS19680;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9F00_RS19680;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	9245	9895	.	+	.	ID=gene-C9F00_RS19685;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9F00_RS19685;old_locus_tag=C9F00_20150
NZ_PYKC01000131.1	Protein Homology	CDS	9245	9895	.	+	0	ID=cds-WP_001674874.1;Parent=gene-C9F00_RS19685;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9F00_RS19685;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	9892	11580	.	+	.	ID=gene-C9F00_RS19690;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9F00_RS19690;old_locus_tag=C9F00_20155
NZ_PYKC01000131.1	Protein Homology	CDS	9892	11580	.	+	0	ID=cds-WP_000848102.1;Parent=gene-C9F00_RS19690;Dbxref=GenBank:WP_000848102.1;Name=WP_000848102.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9F00_RS19690;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848102.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	11577	12695	.	+	.	ID=gene-C9F00_RS19695;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9F00_RS19695;old_locus_tag=C9F00_20160
NZ_PYKC01000131.1	Protein Homology	CDS	11577	12695	.	+	0	ID=cds-WP_000612171.1;Parent=gene-C9F00_RS19695;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9F00_RS19695;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	12720	14777	.	+	.	ID=gene-C9F00_RS19700;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9F00_RS19700;old_locus_tag=C9F00_20165
NZ_PYKC01000131.1	Protein Homology	CDS	12720	14777	.	+	0	ID=cds-WP_000927219.1;Parent=gene-C9F00_RS19700;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9F00_RS19700;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	14801	15208	.	+	.	ID=gene-C9F00_RS19705;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9F00_RS19705;old_locus_tag=C9F00_20170
NZ_PYKC01000131.1	Protein Homology	CDS	14801	15208	.	+	0	ID=cds-WP_001164066.1;Parent=gene-C9F00_RS19705;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9F00_RS19705;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	15205	16500	.	+	.	ID=gene-C9F00_RS19710;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9F00_RS19710;old_locus_tag=C9F00_20175
NZ_PYKC01000131.1	Protein Homology	CDS	15205	16500	.	+	0	ID=cds-WP_000856766.1;Parent=gene-C9F00_RS19710;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9F00_RS19710;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	16478	16921	.	+	.	ID=gene-C9F00_RS19715;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9F00_RS19715;old_locus_tag=C9F00_20180
NZ_PYKC01000131.1	Protein Homology	CDS	16478	16921	.	+	0	ID=cds-WP_000555884.1;Parent=gene-C9F00_RS19715;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9F00_RS19715;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	16921	17931	.	+	.	ID=gene-C9F00_RS19720;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9F00_RS19720;old_locus_tag=C9F00_20185
NZ_PYKC01000131.1	Protein Homology	CDS	16921	17931	.	+	0	ID=cds-WP_000503107.1;Parent=gene-C9F00_RS19720;Dbxref=GenBank:WP_000503107.1;Name=WP_000503107.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9F00_RS19720;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503107.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	17931	18842	.	+	.	ID=gene-C9F00_RS19725;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9F00_RS19725;old_locus_tag=C9F00_20190
NZ_PYKC01000131.1	Protein Homology	CDS	17931	18842	.	+	0	ID=cds-WP_000058741.1;Parent=gene-C9F00_RS19725;Dbxref=GenBank:WP_000058741.1;Name=WP_000058741.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9F00_RS19725;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058741.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	18832	19506	.	+	.	ID=gene-C9F00_RS19730;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9F00_RS19730;old_locus_tag=C9F00_20195
NZ_PYKC01000131.1	Protein Homology	CDS	18832	19506	.	+	0	ID=cds-WP_135369354.1;Parent=gene-C9F00_RS19730;Dbxref=GenBank:WP_135369354.1;Name=WP_135369354.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9F00_RS19730;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_135369354.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	19532	19792	.	+	.	ID=gene-C9F00_RS19735;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9F00_RS19735;old_locus_tag=C9F00_20200
NZ_PYKC01000131.1	Protein Homology	CDS	19532	19792	.	+	0	ID=cds-WP_000342503.1;Parent=gene-C9F00_RS19735;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9F00_RS19735;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	19796	20587	.	+	.	ID=gene-C9F00_RS19740;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9F00_RS19740;old_locus_tag=C9F00_20205
NZ_PYKC01000131.1	Protein Homology	CDS	19796	20587	.	+	0	ID=cds-WP_000498965.1;Parent=gene-C9F00_RS19740;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9F00_RS19740;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	20574	21644	.	+	.	ID=gene-C9F00_RS19745;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9F00_RS19745;old_locus_tag=C9F00_20210
NZ_PYKC01000131.1	Protein Homology	CDS	20574	21644	.	+	0	ID=cds-WP_000097721.1;Parent=gene-C9F00_RS19745;Dbxref=GenBank:WP_000097721.1;Name=WP_000097721.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9F00_RS19745;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097721.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	21782	22279	.	+	.	ID=gene-C9F00_RS19750;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9F00_RS19750;old_locus_tag=C9F00_20215
NZ_PYKC01000131.1	Protein Homology	CDS	21782	22279	.	+	0	ID=cds-WP_000386309.1;Parent=gene-C9F00_RS19750;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9F00_RS19750;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	22282	24063	.	+	.	ID=gene-C9F00_RS19755;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9F00_RS19755;old_locus_tag=C9F00_20220
NZ_PYKC01000131.1	Protein Homology	CDS	22282	24063	.	+	0	ID=cds-WP_135492464.1;Parent=gene-C9F00_RS19755;Dbxref=GenBank:WP_135492464.1;Name=WP_135492464.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9F00_RS19755;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_135492464.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	24091	25320	.	+	.	ID=gene-C9F00_RS19760;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9F00_RS19760;old_locus_tag=C9F00_20225
NZ_PYKC01000131.1	Protein Homology	CDS	24091	25320	.	+	0	ID=cds-WP_000909019.1;Parent=gene-C9F00_RS19760;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9F00_RS19760;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	25391	26422	.	+	.	ID=gene-C9F00_RS19765;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9F00_RS19765;old_locus_tag=C9F00_20230
NZ_PYKC01000131.1	Protein Homology	CDS	25391	26422	.	+	0	ID=cds-WP_023231968.1;Parent=gene-C9F00_RS19765;Dbxref=GenBank:WP_023231968.1;Name=WP_023231968.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9F00_RS19765;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_023231968.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	26441	28498	.	+	.	ID=gene-C9F00_RS19770;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9F00_RS19770;old_locus_tag=C9F00_20235
NZ_PYKC01000131.1	Protein Homology	CDS	26441	28498	.	+	0	ID=cds-WP_135369353.1;Parent=gene-C9F00_RS19770;Dbxref=GenBank:WP_135369353.1;Name=WP_135369353.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9F00_RS19770;product=SPI-1 type III secretion system effector SipA;protein_id=WP_135369353.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	28517	28765	.	+	.	ID=gene-C9F00_RS19775;Name=C9F00_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19775;old_locus_tag=C9F00_20240
NZ_PYKC01000131.1	Protein Homology	CDS	28517	28765	.	+	0	ID=cds-WP_001055579.1;Parent=gene-C9F00_RS19775;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=C9F00_RS19775;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	28809	29069	.	+	.	ID=gene-C9F00_RS19780;Name=C9F00_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19780;old_locus_tag=C9F00_20245
NZ_PYKC01000131.1	Protein Homology	CDS	28809	29069	.	+	0	ID=cds-WP_000692249.1;Parent=gene-C9F00_RS19780;Dbxref=GenBank:WP_000692249.1;Name=WP_000692249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9F00_RS19780;product=hypothetical protein;protein_id=WP_000692249.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	29096	29488	.	+	.	ID=gene-C9F00_RS19785;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9F00_RS19785;old_locus_tag=C9F00_20250
NZ_PYKC01000131.1	Protein Homology	CDS	29096	29488	.	+	0	ID=cds-WP_001748715.1;Parent=gene-C9F00_RS19785;Dbxref=GenBank:WP_001748715.1;Name=WP_001748715.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9F00_RS19785;product=chaperone SicP;protein_id=WP_001748715.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	29475	31106	.	+	.	ID=gene-C9F00_RS19790;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9F00_RS19790;old_locus_tag=C9F00_20255
NZ_PYKC01000131.1	Protein Homology	CDS	29475	31106	.	+	0	ID=cds-WP_135369352.1;Parent=gene-C9F00_RS19790;Dbxref=GenBank:WP_135369352.1;Name=WP_135369352.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F00_RS19790;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_135369352.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	31160	31642	.	-	.	ID=gene-C9F00_RS19795;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9F00_RS19795;old_locus_tag=C9F00_20260
NZ_PYKC01000131.1	Protein Homology	CDS	31160	31642	.	-	0	ID=cds-WP_000558930.1;Parent=gene-C9F00_RS19795;Dbxref=GenBank:WP_000558930.1;Name=WP_000558930.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9F00_RS19795;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558930.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	31660	33321	.	-	.	ID=gene-C9F00_RS19800;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9F00_RS19800;old_locus_tag=C9F00_20265
NZ_PYKC01000131.1	Protein Homology	CDS	31660	33321	.	-	0	ID=cds-WP_001120085.1;Parent=gene-C9F00_RS19800;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9F00_RS19800;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	34410	35339	.	-	.	ID=gene-C9F00_RS19805;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9F00_RS19805;old_locus_tag=C9F00_20270
NZ_PYKC01000131.1	Protein Homology	CDS	34410	35339	.	-	0	ID=cds-WP_000432702.1;Parent=gene-C9F00_RS19805;Dbxref=GenBank:WP_000432702.1;Name=WP_000432702.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9F00_RS19805;product=transcriptional regulator HilD;protein_id=WP_000432702.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	35655	36833	.	+	.	ID=gene-C9F00_RS19810;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9F00_RS19810;old_locus_tag=C9F00_20275
NZ_PYKC01000131.1	Protein Homology	CDS	35655	36833	.	+	0	ID=cds-WP_000450192.1;Parent=gene-C9F00_RS19810;Dbxref=GenBank:WP_000450192.1;Name=WP_000450192.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9F00_RS19810;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450192.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	36858	37100	.	+	.	ID=gene-C9F00_RS19815;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9F00_RS19815;old_locus_tag=C9F00_20280
NZ_PYKC01000131.1	Protein Homology	CDS	36858	37100	.	+	0	ID=cds-WP_000235229.1;Parent=gene-C9F00_RS19815;Dbxref=GenBank:WP_000235229.1;Name=WP_000235229.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9F00_RS19815;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235229.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	37119	37424	.	+	.	ID=gene-C9F00_RS19820;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9F00_RS19820;old_locus_tag=C9F00_20285
NZ_PYKC01000131.1	Protein Homology	CDS	37119	37424	.	+	0	ID=cds-WP_000020431.1;Parent=gene-C9F00_RS19820;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9F00_RS19820;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	37421	38179	.	+	.	ID=gene-C9F00_RS19825;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9F00_RS19825;old_locus_tag=C9F00_20290
NZ_PYKC01000131.1	Protein Homology	CDS	37421	38179	.	+	0	ID=cds-WP_000621238.1;Parent=gene-C9F00_RS19825;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9F00_RS19825;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	38151	38750	.	+	.	ID=gene-C9F00_RS19830;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9F00_RS19830;old_locus_tag=C9F00_20295
NZ_PYKC01000131.1	Protein Homology	CDS	38151	38750	.	+	0	ID=cds-WP_001591231.1;Parent=gene-C9F00_RS19830;Dbxref=GenBank:WP_001591231.1;Name=WP_001591231.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9F00_RS19830;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001591231.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	38707	39387	.	+	.	ID=gene-C9F00_RS19835;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9F00_RS19835;old_locus_tag=C9F00_20300
NZ_PYKC01000131.1	Protein Homology	CDS	38707	39387	.	+	0	ID=cds-WP_000916654.1;Parent=gene-C9F00_RS19835;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9F00_RS19835;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	39384	39836	.	+	.	ID=gene-C9F00_RS19840;Name=C9F00_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19840;old_locus_tag=C9F00_20305
NZ_PYKC01000131.1	Protein Homology	CDS	39384	39836	.	+	0	ID=cds-WP_000612179.1;Parent=gene-C9F00_RS19840;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9F00_RS19840;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	40181	41068	.	+	.	ID=gene-C9F00_RS19845;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9F00_RS19845;old_locus_tag=C9F00_20310
NZ_PYKC01000131.1	Protein Homology	CDS	40181	41068	.	+	0	ID=cds-WP_000243998.1;Parent=gene-C9F00_RS19845;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9F00_RS19845;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	41453	42208	.	+	.	ID=gene-C9F00_RS19850;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9F00_RS19850;old_locus_tag=C9F00_20320
NZ_PYKC01000131.1	Protein Homology	CDS	41453	42208	.	+	0	ID=cds-WP_076735875.1;Parent=gene-C9F00_RS19850;Dbxref=GenBank:WP_076735875.1;Name=WP_076735875.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9F00_RS19850;product=transcriptional regulator SprB;protein_id=WP_076735875.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	42488	43336	.	-	.	ID=gene-C9F00_RS19860;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9F00_RS19860;old_locus_tag=C9F00_20330
NZ_PYKC01000131.1	Protein Homology	CDS	42488	43336	.	-	0	ID=cds-WP_000480208.1;Parent=gene-C9F00_RS19860;Dbxref=GenBank:WP_000480208.1;Name=WP_000480208.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9F00_RS19860;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480208.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	43327	44187	.	-	.	ID=gene-C9F00_RS19865;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9F00_RS19865;old_locus_tag=C9F00_20335
NZ_PYKC01000131.1	Protein Homology	CDS	43327	44187	.	-	0	ID=cds-WP_001104336.1;Parent=gene-C9F00_RS19865;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9F00_RS19865;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	44184	45005	.	-	.	ID=gene-C9F00_RS19870;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9F00_RS19870;old_locus_tag=C9F00_20340
NZ_PYKC01000131.1	Protein Homology	CDS	44184	45005	.	-	0	ID=cds-WP_023181876.1;Parent=gene-C9F00_RS19870;Dbxref=GenBank:WP_023181876.1;Name=WP_023181876.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9F00_RS19870;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_023181876.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	45002	45919	.	-	.	ID=gene-C9F00_RS19875;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9F00_RS19875;old_locus_tag=C9F00_20345
NZ_PYKC01000131.1	Protein Homology	CDS	45002	45919	.	-	0	ID=cds-WP_000182930.1;Parent=gene-C9F00_RS19875;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9F00_RS19875;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	46101	46445	.	+	.	ID=gene-C9F00_RS19880;Name=C9F00_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19880;old_locus_tag=C9F00_20350
NZ_PYKC01000131.1	Protein Homology	CDS	46101	46445	.	+	0	ID=cds-WP_001117944.1;Parent=gene-C9F00_RS19880;Dbxref=GenBank:WP_001117944.1;Name=WP_001117944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9F00_RS19880;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117944.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	46507	48585	.	-	.	ID=gene-C9F00_RS19885;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9F00_RS19885;old_locus_tag=C9F00_20355
NZ_PYKC01000131.1	Protein Homology	CDS	46507	48585	.	-	0	ID=cds-WP_000122692.1;Parent=gene-C9F00_RS19885;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9F00_RS19885;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	48804	49814	.	-	.	ID=gene-C9F00_RS19890;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9F00_RS19890;old_locus_tag=C9F00_20360
NZ_PYKC01000131.1	Protein Homology	CDS	48804	49814	.	-	0	ID=cds-WP_001059953.1;Parent=gene-C9F00_RS19890;Dbxref=GenBank:WP_001059953.1;Name=WP_001059953.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9F00_RS19890;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059953.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	49811	50932	.	-	.	ID=gene-C9F00_RS19895;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9F00_RS19895;old_locus_tag=C9F00_20365
NZ_PYKC01000131.1	Protein Homology	CDS	49811	50932	.	-	0	ID=cds-WP_001212962.1;Parent=gene-C9F00_RS19895;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9F00_RS19895;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	50932	51204	.	-	.	ID=gene-C9F00_RS19900;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F00_RS19900;old_locus_tag=C9F00_20370
NZ_PYKC01000131.1	Protein Homology	CDS	50932	51204	.	-	0	ID=cds-WP_000334871.1;Parent=gene-C9F00_RS19900;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9F00_RS19900;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	51195	52067	.	-	.	ID=gene-C9F00_RS19905;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9F00_RS19905;old_locus_tag=C9F00_20375
NZ_PYKC01000131.1	Protein Homology	CDS	51195	52067	.	-	0	ID=cds-WP_000337646.1;Parent=gene-C9F00_RS19905;Dbxref=GenBank:WP_000337646.1;Name=WP_000337646.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9F00_RS19905;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337646.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	52136	52492	.	-	.	ID=gene-C9F00_RS19910;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F00_RS19910;old_locus_tag=C9F00_20380
NZ_PYKC01000131.1	Protein Homology	CDS	52136	52492	.	-	0	ID=cds-WP_000544461.1;Parent=gene-C9F00_RS19910;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9F00_RS19910;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	52702	53163	.	+	.	ID=gene-C9F00_RS19920;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9F00_RS19920;old_locus_tag=C9F00_20390
NZ_PYKC01000131.1	Protein Homology	CDS	52702	53163	.	+	0	ID=cds-WP_000158075.1;Parent=gene-C9F00_RS19920;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9F00_RS19920;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	53309	53917	.	+	.	ID=gene-C9F00_RS19925;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=C9F00_RS19925;old_locus_tag=C9F00_20395
NZ_PYKC01000131.1	Protein Homology	CDS	53309	53917	.	+	0	ID=cds-WP_001079164.1;Parent=gene-C9F00_RS19925;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9F00_RS19925;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	53917	55743	.	+	.	ID=gene-C9F00_RS19930;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9F00_RS19930;old_locus_tag=C9F00_20400
NZ_PYKC01000131.1	Protein Homology	CDS	53917	55743	.	+	0	ID=cds-WP_135492466.1;Parent=gene-C9F00_RS19930;Dbxref=GenBank:WP_135492466.1;Name=WP_135492466.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9F00_RS19930;product=formate hydrogenlyase subunit 3;protein_id=WP_135492466.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	55746	56669	.	+	.	ID=gene-C9F00_RS19935;Name=C9F00_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19935;old_locus_tag=C9F00_20405
NZ_PYKC01000131.1	Protein Homology	CDS	55746	56669	.	+	0	ID=cds-WP_000110570.1;Parent=gene-C9F00_RS19935;Dbxref=GenBank:WP_000110570.1;Name=WP_000110570.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9F00_RS19935;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110570.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	56687	58396	.	+	.	ID=gene-C9F00_RS19940;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9F00_RS19940;old_locus_tag=C9F00_20410
NZ_PYKC01000131.1	Protein Homology	CDS	56687	58396	.	+	0	ID=cds-WP_001288155.1;Parent=gene-C9F00_RS19940;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9F00_RS19940;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	58406	58948	.	+	.	ID=gene-C9F00_RS19945;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9F00_RS19945;old_locus_tag=C9F00_20415
NZ_PYKC01000131.1	Protein Homology	CDS	58406	58948	.	+	0	ID=cds-WP_000493773.1;Parent=gene-C9F00_RS19945;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9F00_RS19945;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	58948	59715	.	+	.	ID=gene-C9F00_RS19950;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9F00_RS19950;old_locus_tag=C9F00_20420
NZ_PYKC01000131.1	Protein Homology	CDS	58948	59715	.	+	0	ID=cds-WP_000067419.1;Parent=gene-C9F00_RS19950;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9F00_RS19950;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	59712	60122	.	+	.	ID=gene-C9F00_RS19955;Name=C9F00_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19955;old_locus_tag=C9F00_20425
NZ_PYKC01000131.1	Protein Homology	CDS	59712	60122	.	+	0	ID=cds-WP_000003726.1;Parent=gene-C9F00_RS19955;Dbxref=GenBank:WP_000003726.1;Name=WP_000003726.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9F00_RS19955;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003726.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	60115	60585	.	+	.	ID=gene-C9F00_RS19960;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9F00_RS19960;old_locus_tag=C9F00_20430
NZ_PYKC01000131.1	Protein Homology	CDS	60115	60585	.	+	0	ID=cds-WP_000132984.1;Parent=gene-C9F00_RS19960;Dbxref=GenBank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9F00_RS19960;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	60612	61421	.	+	.	ID=gene-C9F00_RS19965;Name=C9F00_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19965;old_locus_tag=C9F00_20435
NZ_PYKC01000131.1	Protein Homology	CDS	60612	61421	.	+	0	ID=cds-WP_135369734.1;Parent=gene-C9F00_RS19965;Dbxref=GenBank:WP_135369734.1;Name=WP_135369734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9F00_RS19965;product=hypothetical protein;protein_id=WP_135369734.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	61622	62167	.	+	.	ID=gene-C9F00_RS19970;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9F00_RS19970;old_locus_tag=C9F00_20440
NZ_PYKC01000131.1	Protein Homology	CDS	61622	62167	.	+	0	ID=cds-WP_001078791.1;Parent=gene-C9F00_RS19970;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9F00_RS19970;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	62313	64553	.	+	.	ID=gene-C9F00_RS19975;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9F00_RS19975;old_locus_tag=C9F00_20445
NZ_PYKC01000131.1	Protein Homology	CDS	62313	64553	.	+	0	ID=cds-WP_135369733.1;Parent=gene-C9F00_RS19975;Dbxref=GenBank:WP_135369733.1;Name=WP_135369733.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9F00_RS19975;product=carbamoyltransferase HypF;protein_id=WP_135369733.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	64650	65783	.	-	.	ID=gene-C9F00_RS19980;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9F00_RS19980;old_locus_tag=C9F00_20450
NZ_PYKC01000131.1	Protein Homology	CDS	64650	65783	.	-	0	ID=cds-WP_000086336.1;Parent=gene-C9F00_RS19980;Dbxref=GenBank:WP_000086336.1;Name=WP_000086336.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9F00_RS19980;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086336.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	65780	67219	.	-	.	ID=gene-C9F00_RS19985;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9F00_RS19985;old_locus_tag=C9F00_20455
NZ_PYKC01000131.1	Protein Homology	CDS	65780	67219	.	-	0	ID=cds-WP_061380583.1;Parent=gene-C9F00_RS19985;Dbxref=GenBank:WP_061380583.1;Name=WP_061380583.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9F00_RS19985;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_061380583.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	67405	68925	.	+	.	ID=gene-C9F00_RS19990;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9F00_RS19990;old_locus_tag=C9F00_20460
NZ_PYKC01000131.1	Protein Homology	CDS	67405	68925	.	+	0	ID=cds-WP_020899131.1;Parent=gene-C9F00_RS19990;Dbxref=GenBank:WP_020899131.1;Name=WP_020899131.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9F00_RS19990;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_020899131.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	68922	69887	.	-	.	ID=gene-C9F00_RS19995;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=C9F00_RS19995;old_locus_tag=C9F00_20465
NZ_PYKC01000131.1	Protein Homology	CDS	68922	69887	.	-	0	ID=cds-WP_001278206.1;Parent=gene-C9F00_RS19995;Dbxref=GenBank:WP_001278206.1;Name=WP_001278206.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9F00_RS19995;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278206.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	69880	70653	.	-	.	ID=gene-C9F00_RS20000;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9F00_RS20000;old_locus_tag=C9F00_20470
NZ_PYKC01000131.1	Protein Homology	CDS	69880	70653	.	-	0	ID=cds-WP_000804536.1;Parent=gene-C9F00_RS20000;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9F00_RS20000;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	70851	71210	.	-	.	ID=gene-C9F00_RS20005;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9F00_RS20005;old_locus_tag=C9F00_20475
NZ_PYKC01000131.1	Protein Homology	CDS	70851	71210	.	-	0	ID=cds-WP_000255198.1;Parent=gene-C9F00_RS20005;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9F00_RS20005;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	71286	72065	.	-	.	ID=gene-C9F00_RS20010;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9F00_RS20010;old_locus_tag=C9F00_20480
NZ_PYKC01000131.1	Protein Homology	CDS	71286	72065	.	-	0	ID=cds-WP_001077372.1;Parent=gene-C9F00_RS20010;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9F00_RS20010;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11
NZ_PYKC01000131.1	RefSeq	gene	72077	72208	.	-	.	ID=gene-C9F00_RS20015;Name=C9F00_RS20015;end_range=72208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20015;old_locus_tag=C9F00_20485;partial=true
NZ_PYKC01000131.1	Protein Homology	CDS	72077	72208	.	-	0	ID=cds-WP_280954499.1;Parent=gene-C9F00_RS20015;Dbxref=GenBank:WP_280954499.1;Name=WP_280954499.1;Ontology_term=GO:0009401,GO:0008982,GO:0005737;end_range=72208,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9F00_RS20015;partial=true;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_280954499.1;transl_table=11
##sequence-region NZ_PYKC01000058.1 1 69245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000058.1	RefSeq	region	1	69245	.	+	.	ID=NZ_PYKC01000058.1:1..69245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000058.1	RefSeq	gene	1	350	.	+	.	ID=gene-C9F00_RS09635;Name=C9F00_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09635;old_locus_tag=C9F00_09870;partial=true;start_range=.,1
NZ_PYKC01000058.1	Protein Homology	CDS	1	350	.	+	2	ID=cds-WP_210114161.1;Parent=gene-C9F00_RS09635;Dbxref=GenBank:WP_210114161.1;Name=WP_210114161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=C9F00_RS09635;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_210114161.1;start_range=.,1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	330	812	.	-	.	ID=gene-C9F00_RS09640;Name=C9F00_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09640;old_locus_tag=C9F00_09875
NZ_PYKC01000058.1	Protein Homology	CDS	330	812	.	-	0	ID=cds-WP_135492267.1;Parent=gene-C9F00_RS09640;Dbxref=GenBank:WP_135492267.1;Name=WP_135492267.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF013401.6;locus_tag=C9F00_RS09640;product=HIT family protein;protein_id=WP_135492267.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	904	1158	.	+	.	ID=gene-C9F00_RS09645;Name=C9F00_RS09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09645;old_locus_tag=C9F00_09880;partial=true;pseudo=true;start_range=.,904
NZ_PYKC01000058.1	Protein Homology	CDS	904	1158	.	+	0	ID=cds-C9F00_RS09645;Parent=gene-C9F00_RS09645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440099.1;locus_tag=C9F00_RS09645;partial=true;product=pyridoxal-phosphate dependent enzyme;pseudo=true;start_range=.,904;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	1179	1847	.	+	.	ID=gene-C9F00_RS09650;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9F00_RS09650;old_locus_tag=C9F00_09885
NZ_PYKC01000058.1	Protein Homology	CDS	1179	1847	.	+	0	ID=cds-WP_001158238.1;Parent=gene-C9F00_RS09650;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9F00_RS09650;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	1844	2596	.	+	.	ID=gene-C9F00_RS09655;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=C9F00_RS09655;old_locus_tag=C9F00_09890
NZ_PYKC01000058.1	Protein Homology	CDS	1844	2596	.	+	0	ID=cds-WP_001273024.1;Parent=gene-C9F00_RS09655;Dbxref=GenBank:WP_001273024.1;Name=WP_001273024.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9F00_RS09655;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273024.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	2829	3551	.	+	.	ID=gene-C9F00_RS09660;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9F00_RS09660;old_locus_tag=C9F00_09895
NZ_PYKC01000058.1	Protein Homology	CDS	2829	3551	.	+	0	ID=cds-WP_001157172.1;Parent=gene-C9F00_RS09660;Dbxref=GenBank:WP_001157172.1;Name=WP_001157172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9F00_RS09660;product=transcriptional regulator SdiA;protein_id=WP_001157172.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	3618	3842	.	-	.	ID=gene-C9F00_RS09665;Name=C9F00_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09665;old_locus_tag=C9F00_09900
NZ_PYKC01000058.1	Protein Homology	CDS	3618	3842	.	-	0	ID=cds-WP_000106483.1;Parent=gene-C9F00_RS09665;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9F00_RS09665;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	3839	3994	.	-	.	ID=gene-C9F00_RS09670;Name=C9F00_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09670;old_locus_tag=C9F00_09905
NZ_PYKC01000058.1	Protein Homology	CDS	3839	3994	.	-	0	ID=cds-WP_000546186.1;Parent=gene-C9F00_RS09670;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9F00_RS09670;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	4306	4962	.	+	.	ID=gene-C9F00_RS09675;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9F00_RS09675;old_locus_tag=C9F00_09910
NZ_PYKC01000058.1	Protein Homology	CDS	4306	4962	.	+	0	ID=cds-WP_000611323.1;Parent=gene-C9F00_RS09675;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9F00_RS09675;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	4959	6791	.	+	.	ID=gene-C9F00_RS09680;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9F00_RS09680;old_locus_tag=C9F00_09915
NZ_PYKC01000058.1	Protein Homology	CDS	4959	6791	.	+	0	ID=cds-WP_001289468.1;Parent=gene-C9F00_RS09680;Dbxref=GenBank:WP_001289468.1;Name=WP_001289468.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9F00_RS09680;product=excinuclease ABC subunit UvrC;protein_id=WP_001289468.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	6848	7396	.	+	.	ID=gene-C9F00_RS09685;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9F00_RS09685;old_locus_tag=C9F00_09920
NZ_PYKC01000058.1	Protein Homology	CDS	6848	7396	.	+	0	ID=cds-WP_001160192.1;Parent=gene-C9F00_RS09685;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9F00_RS09685;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	7548	7623	.	+	.	ID=gene-C9F00_RS09690;Name=C9F00_RS09690;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS09690;old_locus_tag=C9F00_09925
NZ_PYKC01000058.1	tRNAscan-SE	tRNA	7548	7623	.	+	.	ID=rna-C9F00_RS09690;Parent=gene-C9F00_RS09690;anticodon=(pos:7581..7583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09690;product=tRNA-Gly
NZ_PYKC01000058.1	tRNAscan-SE	exon	7548	7623	.	+	.	ID=exon-C9F00_RS09690-1;Parent=rna-C9F00_RS09690;anticodon=(pos:7581..7583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09690;product=tRNA-Gly
NZ_PYKC01000058.1	RefSeq	gene	7675	7748	.	+	.	ID=gene-C9F00_RS09695;Name=C9F00_RS09695;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS09695;old_locus_tag=C9F00_09930
NZ_PYKC01000058.1	tRNAscan-SE	tRNA	7675	7748	.	+	.	ID=rna-C9F00_RS09695;Parent=gene-C9F00_RS09695;anticodon=(pos:7707..7709);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09695;product=tRNA-Cys
NZ_PYKC01000058.1	tRNAscan-SE	exon	7675	7748	.	+	.	ID=exon-C9F00_RS09695-1;Parent=rna-C9F00_RS09695;anticodon=(pos:7707..7709);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09695;product=tRNA-Cys
NZ_PYKC01000058.1	RefSeq	gene	7760	7846	.	+	.	ID=gene-C9F00_RS09700;Name=C9F00_RS09700;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS09700;old_locus_tag=C9F00_09935
NZ_PYKC01000058.1	tRNAscan-SE	tRNA	7760	7846	.	+	.	ID=rna-C9F00_RS09700;Parent=gene-C9F00_RS09700;anticodon=(pos:7794..7796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09700;product=tRNA-Leu
NZ_PYKC01000058.1	tRNAscan-SE	exon	7760	7846	.	+	.	ID=exon-C9F00_RS09700-1;Parent=rna-C9F00_RS09700;anticodon=(pos:7794..7796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09700;product=tRNA-Leu
NZ_PYKC01000058.1	RefSeq	gene	8097	8429	.	+	.	ID=gene-C9F00_RS09705;Name=C9F00_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09705;old_locus_tag=C9F00_09940
NZ_PYKC01000058.1	Protein Homology	CDS	8097	8429	.	+	0	ID=cds-WP_023139758.1;Parent=gene-C9F00_RS09705;Dbxref=GenBank:WP_023139758.1;Name=WP_023139758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9F00_RS09705;product=hypothetical protein;protein_id=WP_023139758.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	8643	10082	.	+	.	ID=gene-C9F00_RS09710;Name=C9F00_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09710;old_locus_tag=C9F00_09945
NZ_PYKC01000058.1	Protein Homology	CDS	8643	10082	.	+	0	ID=cds-WP_135369689.1;Parent=gene-C9F00_RS09710;Dbxref=GenBank:WP_135369689.1;Name=WP_135369689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9F00_RS09710;product=SH3 domain-containing C40 family peptidase;protein_id=WP_135369689.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	10295	10621	.	+	.	ID=gene-C9F00_RS09715;Name=C9F00_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09715;old_locus_tag=C9F00_09950
NZ_PYKC01000058.1	Protein Homology	CDS	10295	10621	.	+	0	ID=cds-WP_000240837.1;Parent=gene-C9F00_RS09715;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9F00_RS09715;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	10860	11525	.	+	.	ID=gene-C9F00_RS09720;Name=C9F00_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09720;old_locus_tag=C9F00_09955
NZ_PYKC01000058.1	Protein Homology	CDS	10860	11525	.	+	0	ID=cds-WP_000781521.1;Parent=gene-C9F00_RS09720;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9F00_RS09720;product=YecA family protein;protein_id=WP_000781521.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	11600	12811	.	-	.	ID=gene-C9F00_RS09725;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=C9F00_RS09725;old_locus_tag=C9F00_09960
NZ_PYKC01000058.1	Protein Homology	CDS	11600	12811	.	-	0	ID=cds-WP_023204702.1;Parent=gene-C9F00_RS09725;Dbxref=GenBank:WP_023204702.1;Name=WP_023204702.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9F00_RS09725;product=tyrosine transporter TyrP;protein_id=WP_023204702.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	13038	13277	.	+	.	ID=gene-C9F00_RS09730;Name=C9F00_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09730;old_locus_tag=C9F00_09965
NZ_PYKC01000058.1	Protein Homology	CDS	13038	13277	.	+	0	ID=cds-WP_000377238.1;Parent=gene-C9F00_RS09730;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9F00_RS09730;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	13323	13820	.	-	.	ID=gene-C9F00_RS09735;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9F00_RS09735;old_locus_tag=C9F00_09970
NZ_PYKC01000058.1	Protein Homology	CDS	13323	13820	.	-	0	ID=cds-WP_000920611.1;Parent=gene-C9F00_RS09735;Dbxref=GenBank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9F00_RS09735;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	14060	14395	.	-	.	ID=gene-C9F00_RS09740;Name=C9F00_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09740;old_locus_tag=C9F00_09975
NZ_PYKC01000058.1	Protein Homology	CDS	14060	14395	.	-	0	ID=cds-WP_023258287.1;Parent=gene-C9F00_RS09740;Dbxref=GenBank:WP_023258287.1;Name=WP_023258287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9F00_RS09740;product=YecR-like lipofamily protein;protein_id=WP_023258287.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	14651	15289	.	+	.	ID=gene-C9F00_RS09745;Name=C9F00_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09745;old_locus_tag=C9F00_09980
NZ_PYKC01000058.1	Protein Homology	CDS	14651	15289	.	+	0	ID=cds-WP_000684804.1;Parent=gene-C9F00_RS09745;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F00_RS09745;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	15468	15971	.	-	.	ID=gene-C9F00_RS09750;Name=C9F00_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09750;old_locus_tag=C9F00_09985
NZ_PYKC01000058.1	Protein Homology	CDS	15468	15971	.	-	0	ID=cds-WP_000741707.1;Parent=gene-C9F00_RS09750;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9F00_RS09750;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	16522	17079	.	+	.	ID=gene-C9F00_RS09755;Name=C9F00_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09755;old_locus_tag=C9F00_09990
NZ_PYKC01000058.1	Protein Homology	CDS	16522	17079	.	+	0	ID=cds-WP_000754796.1;Parent=gene-C9F00_RS09755;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9F00_RS09755;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	17191	17371	.	+	.	ID=gene-C9F00_RS09760;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9F00_RS09760;old_locus_tag=C9F00_09995;partial=true;pseudo=true;start_range=.,17191
NZ_PYKC01000058.1	Protein Homology	CDS	17191	17371	.	+	0	ID=cds-C9F00_RS09760;Parent=gene-C9F00_RS09760;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=C9F00_RS09760;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,17191;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	17594	18397	.	+	.	ID=gene-C9F00_RS09765;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9F00_RS09765;old_locus_tag=C9F00_10000
NZ_PYKC01000058.1	Protein Homology	CDS	17594	18397	.	+	0	ID=cds-WP_000840114.1;Parent=gene-C9F00_RS09765;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9F00_RS09765;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	18372	19793	.	+	.	ID=gene-C9F00_RS09770;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9F00_RS09770;old_locus_tag=C9F00_10005
NZ_PYKC01000058.1	Protein Homology	CDS	18372	19793	.	+	0	ID=cds-WP_000089042.1;Parent=gene-C9F00_RS09770;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9F00_RS09770;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	19811	20239	.	-	.	ID=gene-C9F00_RS09775;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9F00_RS09775;old_locus_tag=C9F00_10010
NZ_PYKC01000058.1	Protein Homology	CDS	19811	20239	.	-	0	ID=cds-WP_000122606.1;Parent=gene-C9F00_RS09775;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9F00_RS09775;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	20236	20352	.	-	.	ID=gene-C9F00_RS09780;Name=C9F00_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09780;old_locus_tag=C9F00_10015
NZ_PYKC01000058.1	Protein Homology	CDS	20236	20352	.	-	0	ID=cds-WP_031609601.1;Parent=gene-C9F00_RS09780;Dbxref=GenBank:WP_031609601.1;Name=WP_031609601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9F00_RS09780;product=hypothetical protein;protein_id=WP_031609601.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	21035	21376	.	+	.	ID=gene-C9F00_RS09785;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9F00_RS09785;old_locus_tag=C9F00_10020
NZ_PYKC01000058.1	Protein Homology	CDS	21035	21376	.	+	0	ID=cds-WP_001518146.1;Parent=gene-C9F00_RS09785;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9F00_RS09785;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	21373	21957	.	+	.	ID=gene-C9F00_RS09790;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9F00_RS09790;old_locus_tag=C9F00_10025
NZ_PYKC01000058.1	Protein Homology	CDS	21373	21957	.	+	0	ID=cds-WP_000605987.1;Parent=gene-C9F00_RS09790;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9F00_RS09790;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	22082	22969	.	+	.	ID=gene-C9F00_RS09795;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9F00_RS09795;old_locus_tag=C9F00_10030
NZ_PYKC01000058.1	Protein Homology	CDS	22082	22969	.	+	0	ID=cds-WP_000906312.1;Parent=gene-C9F00_RS09795;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9F00_RS09795;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	22966	23895	.	+	.	ID=gene-C9F00_RS09800;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9F00_RS09800;old_locus_tag=C9F00_10035
NZ_PYKC01000058.1	Protein Homology	CDS	22966	23895	.	+	0	ID=cds-WP_000795653.1;Parent=gene-C9F00_RS09800;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9F00_RS09800;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	23900	25915	.	+	.	ID=gene-C9F00_RS09805;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9F00_RS09805;old_locus_tag=C9F00_10040
NZ_PYKC01000058.1	Protein Homology	CDS	23900	25915	.	+	0	ID=cds-WP_135492269.1;Parent=gene-C9F00_RS09805;Dbxref=GenBank:WP_135492269.1;Name=WP_135492269.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F00_RS09805;product=chemotaxis protein CheA;protein_id=WP_135492269.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	25936	26439	.	+	.	ID=gene-C9F00_RS09810;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9F00_RS09810;old_locus_tag=C9F00_10045
NZ_PYKC01000058.1	Protein Homology	CDS	25936	26439	.	+	0	ID=cds-WP_000147295.1;Parent=gene-C9F00_RS09810;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9F00_RS09810;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	26676	28337	.	+	.	ID=gene-C9F00_RS09815;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9F00_RS09815;old_locus_tag=C9F00_10050
NZ_PYKC01000058.1	Protein Homology	CDS	26676	28337	.	+	0	ID=cds-WP_000483277.1;Parent=gene-C9F00_RS09815;Dbxref=GenBank:WP_000483277.1;Name=WP_000483277.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9F00_RS09815;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483277.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	28498	29364	.	+	.	ID=gene-C9F00_RS09820;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9F00_RS09820;old_locus_tag=C9F00_10055
NZ_PYKC01000058.1	Protein Homology	CDS	28498	29364	.	+	0	ID=cds-WP_000204362.1;Parent=gene-C9F00_RS09820;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9F00_RS09820;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	29361	30410	.	+	.	ID=gene-C9F00_RS09825;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9F00_RS09825;old_locus_tag=C9F00_10060
NZ_PYKC01000058.1	Protein Homology	CDS	29361	30410	.	+	0	ID=cds-WP_000036392.1;Parent=gene-C9F00_RS09825;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9F00_RS09825;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	30428	30817	.	+	.	ID=gene-C9F00_RS09830;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9F00_RS09830;old_locus_tag=C9F00_10065
NZ_PYKC01000058.1	Protein Homology	CDS	30428	30817	.	+	0	ID=cds-WP_000763861.1;Parent=gene-C9F00_RS09830;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9F00_RS09830;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	30828	31472	.	+	.	ID=gene-C9F00_RS09835;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9F00_RS09835;old_locus_tag=C9F00_10070
NZ_PYKC01000058.1	Protein Homology	CDS	30828	31472	.	+	0	ID=cds-WP_000983586.1;Parent=gene-C9F00_RS09835;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9F00_RS09835;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	31666	32817	.	+	.	ID=gene-C9F00_RS09840;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9F00_RS09840;old_locus_tag=C9F00_10075
NZ_PYKC01000058.1	Protein Homology	CDS	31666	32817	.	+	0	ID=cds-WP_000797081.1;Parent=gene-C9F00_RS09840;Dbxref=GenBank:WP_000797081.1;Name=WP_000797081.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9F00_RS09840;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797081.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	32810	34888	.	+	.	ID=gene-C9F00_RS09845;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9F00_RS09845;old_locus_tag=C9F00_10080
NZ_PYKC01000058.1	Protein Homology	CDS	32810	34888	.	+	0	ID=cds-WP_000002392.1;Parent=gene-C9F00_RS09845;Dbxref=GenBank:WP_000002392.1;Name=WP_000002392.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9F00_RS09845;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	34888	35280	.	+	.	ID=gene-C9F00_RS09850;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=C9F00_RS09850;old_locus_tag=C9F00_10085
NZ_PYKC01000058.1	Protein Homology	CDS	34888	35280	.	+	0	ID=cds-WP_001233620.1;Parent=gene-C9F00_RS09850;Dbxref=GenBank:WP_001233620.1;Name=WP_001233620.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9F00_RS09850;product=flagellar protein FlhE;protein_id=WP_001233620.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	35517	36656	.	+	.	ID=gene-C9F00_RS09855;Name=C9F00_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09855;old_locus_tag=C9F00_10090
NZ_PYKC01000058.1	Protein Homology	CDS	35517	36656	.	+	0	ID=cds-WP_000989908.1;Parent=gene-C9F00_RS09855;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F00_RS09855;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	36710	38581	.	-	.	ID=gene-C9F00_RS09860;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F00_RS09860;old_locus_tag=C9F00_10095
NZ_PYKC01000058.1	Protein Homology	CDS	36710	38581	.	-	0	ID=cds-WP_050067675.1;Parent=gene-C9F00_RS09860;Dbxref=GenBank:WP_050067675.1;Name=WP_050067675.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F00_RS09860;product=penicillin-binding protein 2;protein_id=WP_050067675.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	38770	40503	.	-	.	ID=gene-C9F00_RS09865;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=C9F00_RS09865;old_locus_tag=C9F00_10100
NZ_PYKC01000058.1	Protein Homology	CDS	38770	40503	.	-	0	ID=cds-WP_001025363.1;Parent=gene-C9F00_RS09865;Dbxref=GenBank:WP_001025363.1;Name=WP_001025363.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9F00_RS09865;product=arginine--tRNA ligase;protein_id=WP_001025363.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	40740	41309	.	+	.	ID=gene-C9F00_RS09870;Name=C9F00_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09870;old_locus_tag=C9F00_10105
NZ_PYKC01000058.1	Protein Homology	CDS	40740	41309	.	+	0	ID=cds-WP_000024796.1;Parent=gene-C9F00_RS09870;Dbxref=GenBank:WP_000024796.1;Name=WP_000024796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9F00_RS09870;product=VOC family protein;protein_id=WP_000024796.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	41329	42075	.	+	.	ID=gene-C9F00_RS09875;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9F00_RS09875;old_locus_tag=C9F00_10110
NZ_PYKC01000058.1	Protein Homology	CDS	41329	42075	.	+	0	ID=cds-WP_001185780.1;Parent=gene-C9F00_RS09875;Dbxref=GenBank:WP_001185780.1;Name=WP_001185780.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9F00_RS09875;product=copper homeostasis protein CutC;protein_id=WP_001185780.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	42311	43282	.	-	.	ID=gene-C9F00_RS09880;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9F00_RS09880;old_locus_tag=C9F00_10115
NZ_PYKC01000058.1	Protein Homology	CDS	42311	43282	.	-	0	ID=cds-WP_031605237.1;Parent=gene-C9F00_RS09880;Dbxref=GenBank:WP_031605237.1;Name=WP_031605237.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9F00_RS09880;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_031605237.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	43279	44022	.	-	.	ID=gene-C9F00_RS09885;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9F00_RS09885;old_locus_tag=C9F00_10120
NZ_PYKC01000058.1	Protein Homology	CDS	43279	44022	.	-	0	ID=cds-WP_000019607.1;Parent=gene-C9F00_RS09885;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9F00_RS09885;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	44063	44458	.	-	.	ID=gene-C9F00_RS09890;Name=C9F00_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09890;old_locus_tag=C9F00_10125
NZ_PYKC01000058.1	Protein Homology	CDS	44063	44458	.	-	0	ID=cds-WP_000252975.1;Parent=gene-C9F00_RS09890;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9F00_RS09890;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	44511	44606	.	-	.	ID=gene-C9F00_RS24405;Name=C9F00_RS24405;end_range=44606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24405;partial=true;pseudo=true
NZ_PYKC01000058.1	Protein Homology	CDS	44511	44606	.	-	0	ID=cds-C9F00_RS24405;Parent=gene-C9F00_RS24405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9F00_RS24405;partial=true;product=DUF72 domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	44569	46646	.	+	.	ID=gene-C9F00_RS09895;Name=C9F00_RS09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09895;old_locus_tag=C9F00_10130;pseudo=true
NZ_PYKC01000058.1	Protein Homology	CDS	44569	46646	.	+	0	ID=cds-C9F00_RS09895;Parent=gene-C9F00_RS09895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9F00_RS09895;product=phage tail protein;pseudo=true;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	46646	47230	.	+	.	ID=gene-C9F00_RS09900;Name=C9F00_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09900;old_locus_tag=C9F00_10135
NZ_PYKC01000058.1	Protein Homology	CDS	46646	47230	.	+	0	ID=cds-WP_135369337.1;Parent=gene-C9F00_RS09900;Dbxref=GenBank:WP_135369337.1;Name=WP_135369337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9F00_RS09900;product=tail fiber assembly protein;protein_id=WP_135369337.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	47327	47527	.	-	.	ID=gene-C9F00_RS09905;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=C9F00_RS09905;old_locus_tag=C9F00_10140
NZ_PYKC01000058.1	Protein Homology	CDS	47327	47527	.	-	0	ID=cds-WP_033578003.1;Parent=gene-C9F00_RS09905;Dbxref=GenBank:WP_033578003.1;Name=WP_033578003.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9F00_RS09905;product=vesicle-borne virulence factor PagK;protein_id=WP_033578003.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	47905	48106	.	-	.	ID=gene-C9F00_RS24410;Name=C9F00_RS24410;end_range=48106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24410;partial=true;pseudo=true;start_range=.,47905
NZ_PYKC01000058.1	Protein Homology	CDS	47905	48106	.	-	0	ID=cds-C9F00_RS24410;Parent=gene-C9F00_RS24410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=48106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F00_RS24410;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,47905;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	48097	48222	.	+	.	ID=gene-C9F00_RS24415;Name=C9F00_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24415;old_locus_tag=C9F00_10150
NZ_PYKC01000058.1	Protein Homology	CDS	48097	48222	.	+	0	ID=cds-WP_000457876.1;Parent=gene-C9F00_RS24415;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9F00_RS24415;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	48555	49431	.	+	.	ID=gene-C9F00_RS09920;Name=C9F00_RS09920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09920;old_locus_tag=C9F00_10155;pseudo=true
NZ_PYKC01000058.1	Protein Homology	CDS	48555	49431	.	+	0	ID=cds-C9F00_RS09920;Parent=gene-C9F00_RS09920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F00_RS09920;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	49603	51699	.	+	.	ID=gene-C9F00_RS09925;Name=C9F00_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09925;old_locus_tag=C9F00_10160
NZ_PYKC01000058.1	Protein Homology	CDS	49603	51699	.	+	0	ID=cds-WP_135492271.1;Parent=gene-C9F00_RS09925;Dbxref=GenBank:WP_135492271.1;Name=WP_135492271.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=C9F00_RS09925;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_135492271.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	51733	51831	.	+	.	ID=gene-C9F00_RS09930;Name=C9F00_RS09930;end_range=51831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09930;old_locus_tag=C9F00_10165;partial=true;pseudo=true;start_range=.,51733
NZ_PYKC01000058.1	Protein Homology	CDS	51733	51831	.	+	0	ID=cds-C9F00_RS09930;Parent=gene-C9F00_RS09930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=51831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F00_RS09930;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,51733;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	51841	52369	.	+	.	ID=gene-C9F00_RS09935;Name=C9F00_RS09935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09935;old_locus_tag=C9F00_10170;partial=true;pseudo=true;start_range=.,51841
NZ_PYKC01000058.1	Protein Homology	CDS	51841	52369	.	+	0	ID=cds-C9F00_RS09935;Parent=gene-C9F00_RS09935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9F00_RS09935;partial=true;product=transposase;pseudo=true;start_range=.,51841;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	52515	52655	.	-	.	ID=gene-C9F00_RS09940;Name=C9F00_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09940;old_locus_tag=C9F00_10175
NZ_PYKC01000058.1	Protein Homology	CDS	52515	52655	.	-	0	ID=cds-WP_045899713.1;Parent=gene-C9F00_RS09940;Dbxref=GenBank:WP_045899713.1;Name=WP_045899713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9F00_RS09940;product=hypothetical protein;protein_id=WP_045899713.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	52821	53089	.	-	.	ID=gene-C9F00_RS09945;Name=C9F00_RS09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09945;old_locus_tag=C9F00_10180;pseudo=true
NZ_PYKC01000058.1	Protein Homology	CDS	52821	53089	.	-	0	ID=cds-C9F00_RS09945;Parent=gene-C9F00_RS09945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9F00_RS09945;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	53459	53878	.	+	.	ID=gene-C9F00_RS09955;Name=C9F00_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09955;old_locus_tag=C9F00_10190
NZ_PYKC01000058.1	Protein Homology	CDS	53459	53878	.	+	0	ID=cds-WP_080211977.1;Parent=gene-C9F00_RS09955;Dbxref=GenBank:WP_080211977.1;Name=WP_080211977.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9F00_RS09955;product=GNAT family N-acetyltransferase;protein_id=WP_080211977.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	54266	54742	.	-	.	ID=gene-C9F00_RS09960;Name=C9F00_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09960;old_locus_tag=C9F00_10195
NZ_PYKC01000058.1	Protein Homology	CDS	54266	54742	.	-	0	ID=cds-WP_023194965.1;Parent=gene-C9F00_RS09960;Dbxref=GenBank:WP_023194965.1;Name=WP_023194965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9F00_RS09960;product=hypothetical protein;protein_id=WP_023194965.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	55071	55466	.	-	.	ID=gene-C9F00_RS09965;Name=C9F00_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09965;old_locus_tag=C9F00_10200
NZ_PYKC01000058.1	Protein Homology	CDS	55071	55466	.	-	0	ID=cds-WP_000422887.1;Parent=gene-C9F00_RS09965;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9F00_RS09965;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	56151	56873	.	+	.	ID=gene-C9F00_RS09970;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9F00_RS09970;old_locus_tag=C9F00_10205
NZ_PYKC01000058.1	Protein Homology	CDS	56151	56873	.	+	0	ID=cds-WP_135369185.1;Parent=gene-C9F00_RS09970;Dbxref=GenBank:WP_135369185.1;Name=WP_135369185.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9F00_RS09970;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_135369185.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	57158	57322	.	+	.	ID=gene-C9F00_RS09975;Name=C9F00_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09975;old_locus_tag=C9F00_10210
NZ_PYKC01000058.1	Protein Homology	CDS	57158	57322	.	+	0	ID=cds-WP_001134853.1;Parent=gene-C9F00_RS09975;Dbxref=GenBank:WP_001134853.1;Name=WP_001134853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9F00_RS09975;product=hypothetical protein;protein_id=WP_001134853.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	57313	57528	.	+	.	ID=gene-C9F00_RS24810;Name=C9F00_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24810
NZ_PYKC01000058.1	Protein Homology	CDS	57313	57528	.	+	0	ID=cds-WP_001662415.1;Parent=gene-C9F00_RS24810;Dbxref=GenBank:WP_001662415.1;Name=WP_001662415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764306.1;locus_tag=C9F00_RS24810;product=hypothetical protein;protein_id=WP_001662415.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	57546	58196	.	+	.	ID=gene-C9F00_RS09980;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9F00_RS09980;old_locus_tag=C9F00_10215
NZ_PYKC01000058.1	Protein Homology	CDS	57546	58196	.	+	0	ID=cds-WP_023226864.1;Parent=gene-C9F00_RS09980;Dbxref=GenBank:WP_023226864.1;Name=WP_023226864.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9F00_RS09980;product=protein-serine/threonine phosphatase;protein_id=WP_023226864.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	58215	58406	.	-	.	ID=gene-C9F00_RS09985;Name=C9F00_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09985;old_locus_tag=C9F00_10220
NZ_PYKC01000058.1	Protein Homology	CDS	58215	58406	.	-	0	ID=cds-WP_000457838.1;Parent=gene-C9F00_RS09985;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9F00_RS09985;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	58517	58753	.	-	.	ID=gene-C9F00_RS09990;Name=C9F00_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09990;old_locus_tag=C9F00_10225
NZ_PYKC01000058.1	Protein Homology	CDS	58517	58753	.	-	0	ID=cds-WP_024131167.1;Parent=gene-C9F00_RS09990;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9F00_RS09990;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	58871	60310	.	-	.	ID=gene-C9F00_RS09995;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9F00_RS09995;old_locus_tag=C9F00_10230
NZ_PYKC01000058.1	Protein Homology	CDS	58871	60310	.	-	0	ID=cds-WP_135369493.1;Parent=gene-C9F00_RS09995;Dbxref=GenBank:WP_135369493.1;Name=WP_135369493.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9F00_RS09995;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_135369493.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	60388	63021	.	-	.	ID=gene-C9F00_RS10000;Name=C9F00_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10000;old_locus_tag=C9F00_10235
NZ_PYKC01000058.1	Protein Homology	CDS	60388	63021	.	-	0	ID=cds-WP_001521100.1;Parent=gene-C9F00_RS10000;Dbxref=GenBank:WP_001521100.1;Name=WP_001521100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9F00_RS10000;product=PqiB family protein;protein_id=WP_001521100.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	62990	64273	.	-	.	ID=gene-C9F00_RS10005;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9F00_RS10005;old_locus_tag=C9F00_10240
NZ_PYKC01000058.1	Protein Homology	CDS	62990	64273	.	-	0	ID=cds-WP_001207294.1;Parent=gene-C9F00_RS10005;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9F00_RS10005;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	64402	64899	.	+	.	ID=gene-C9F00_RS10010;Name=C9F00_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10010;old_locus_tag=C9F00_10245
NZ_PYKC01000058.1	Protein Homology	CDS	64402	64899	.	+	0	ID=cds-WP_001518229.1;Parent=gene-C9F00_RS10010;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9F00_RS10010;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	64997	65683	.	+	.	ID=gene-C9F00_RS10015;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9F00_RS10015;old_locus_tag=C9F00_10250
NZ_PYKC01000058.1	Protein Homology	CDS	64997	65683	.	+	0	ID=cds-WP_000431401.1;Parent=gene-C9F00_RS10015;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9F00_RS10015;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	65703	67751	.	+	.	ID=gene-C9F00_RS10020;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=C9F00_RS10020;old_locus_tag=C9F00_10255
NZ_PYKC01000058.1	Protein Homology	CDS	65703	67751	.	+	0	ID=cds-WP_001525059.1;Parent=gene-C9F00_RS10020;Dbxref=GenBank:WP_001525059.1;Name=WP_001525059.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9F00_RS10020;product=carboxy terminal-processing peptidase;protein_id=WP_001525059.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	gene	67945	68826	.	+	.	ID=gene-C9F00_RS10025;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9F00_RS10025;old_locus_tag=C9F00_10260
NZ_PYKC01000058.1	Protein Homology	CDS	67945	68826	.	+	0	ID=cds-WP_000984498.1;Parent=gene-C9F00_RS10025;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9F00_RS10025;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11
NZ_PYKC01000058.1	RefSeq	pseudogene	68874	69245	.	-	.	ID=gene-C9F00_RS10030;Name=C9F00_RS10030;end_range=69245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS10030;old_locus_tag=C9F00_10265;partial=true;pseudo=true
NZ_PYKC01000058.1	Protein Homology	CDS	68874	69245	.	-	0	ID=cds-C9F00_RS10030;Parent=gene-C9F00_RS10030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=69245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=C9F00_RS10030;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000066.1 1 2189
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000066.1	RefSeq	region	1	2189	.	+	.	ID=NZ_PYKC01000066.1:1..2189;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000066.1	RefSeq	gene	1	378	.	+	.	ID=gene-C9F00_RS11375;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9F00_RS11375;old_locus_tag=C9F00_11650;partial=true;start_range=.,1
NZ_PYKC01000066.1	Protein Homology	CDS	1	378	.	+	0	ID=cds-WP_245306387.1;Parent=gene-C9F00_RS11375;Dbxref=GenBank:WP_245306387.1;Name=WP_245306387.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=C9F00_RS11375;partial=true;product=universal stress protein UspA;protein_id=WP_245306387.1;start_range=.,1;transl_table=11
NZ_PYKC01000066.1	RefSeq	gene	709	2189	.	+	.	ID=gene-C9F00_RS11380;Name=dtpB;end_range=2189,.;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9F00_RS11380;old_locus_tag=C9F00_11655;partial=true
NZ_PYKC01000066.1	Protein Homology	CDS	709	2189	.	+	0	ID=cds-WP_135492297.1;Parent=gene-C9F00_RS11380;Dbxref=GenBank:WP_135492297.1;Name=WP_135492297.1;end_range=2189,.;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154876.1;locus_tag=C9F00_RS11380;partial=true;product=dipeptide/tripeptide permease DtpB;protein_id=WP_135492297.1;transl_table=11
##sequence-region NZ_PYKC01000004.1 1 66888
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000004.1	RefSeq	region	1	66888	.	+	.	ID=NZ_PYKC01000004.1:1..66888;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000004.1	RefSeq	pseudogene	53	472	.	-	.	ID=gene-C9F00_RS00905;Name=C9F00_RS00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS00905;old_locus_tag=C9F00_00920;partial=true;pseudo=true;start_range=.,53
NZ_PYKC01000004.1	Protein Homology	CDS	53	472	.	-	0	ID=cds-C9F00_RS00905;Parent=gene-C9F00_RS00905;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F00_RS00905;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,53;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	489	728	.	-	.	ID=gene-C9F00_RS00910;Name=C9F00_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00910;old_locus_tag=C9F00_00925
NZ_PYKC01000004.1	Protein Homology	CDS	489	728	.	-	0	ID=cds-WP_001001154.1;Parent=gene-C9F00_RS00910;Dbxref=GenBank:WP_001001154.1;Name=WP_001001154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9F00_RS00910;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001154.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	887	2227	.	-	.	ID=gene-C9F00_RS00915;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9F00_RS00915;old_locus_tag=C9F00_00930
NZ_PYKC01000004.1	Protein Homology	CDS	887	2227	.	-	0	ID=cds-WP_000183602.1;Parent=gene-C9F00_RS00915;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9F00_RS00915;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	2472	3515	.	+	.	ID=gene-C9F00_RS00920;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F00_RS00920;old_locus_tag=C9F00_00935
NZ_PYKC01000004.1	Protein Homology	CDS	2472	3515	.	+	0	ID=cds-WP_072095630.1;Parent=gene-C9F00_RS00920;Dbxref=GenBank:WP_072095630.1;Name=WP_072095630.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9F00_RS00920;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072095630.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	3545	3838	.	+	.	ID=gene-C9F00_RS00925;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F00_RS00925;old_locus_tag=C9F00_00940
NZ_PYKC01000004.1	Protein Homology	CDS	3545	3838	.	+	0	ID=cds-WP_000691461.1;Parent=gene-C9F00_RS00925;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9F00_RS00925;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	3835	4704	.	+	.	ID=gene-C9F00_RS00930;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9F00_RS00930;old_locus_tag=C9F00_00945
NZ_PYKC01000004.1	Protein Homology	CDS	3835	4704	.	+	0	ID=cds-WP_001247811.1;Parent=gene-C9F00_RS00930;Dbxref=GenBank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9F00_RS00930;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	4715	6235	.	+	.	ID=gene-C9F00_RS00935;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9F00_RS00935;old_locus_tag=C9F00_00950
NZ_PYKC01000004.1	Protein Homology	CDS	4715	6235	.	+	0	ID=cds-WP_000665575.1;Parent=gene-C9F00_RS00935;Dbxref=GenBank:WP_000665575.1;Name=WP_000665575.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9F00_RS00935;product=citrate lyase subunit alpha;protein_id=WP_000665575.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	6235	6786	.	+	.	ID=gene-C9F00_RS00940;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F00_RS00940;old_locus_tag=C9F00_00955
NZ_PYKC01000004.1	Protein Homology	CDS	6235	6786	.	+	0	ID=cds-WP_135369436.1;Parent=gene-C9F00_RS00940;Dbxref=GenBank:WP_135369436.1;Name=WP_135369436.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9F00_RS00940;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369436.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	6764	7672	.	+	.	ID=gene-C9F00_RS00945;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9F00_RS00945;old_locus_tag=C9F00_00960
NZ_PYKC01000004.1	Protein Homology	CDS	6764	7672	.	+	0	ID=cds-WP_000117014.1;Parent=gene-C9F00_RS00945;Dbxref=GenBank:WP_000117014.1;Name=WP_000117014.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9F00_RS00945;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000117014.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	7852	8673	.	+	.	ID=gene-C9F00_RS00950;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9F00_RS00950;old_locus_tag=C9F00_00965
NZ_PYKC01000004.1	Protein Homology	CDS	7852	8673	.	+	0	ID=cds-WP_000544032.1;Parent=gene-C9F00_RS00950;Dbxref=GenBank:WP_000544032.1;Name=WP_000544032.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9F00_RS00950;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544032.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	9537	10685	.	+	.	ID=gene-C9F00_RS00960;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9F00_RS00960;old_locus_tag=C9F00_00975
NZ_PYKC01000004.1	Protein Homology	CDS	9537	10685	.	+	0	ID=cds-WP_135369437.1;Parent=gene-C9F00_RS00960;Dbxref=GenBank:WP_135369437.1;Name=WP_135369437.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9F00_RS00960;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_135369437.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	10704	13931	.	+	.	ID=gene-C9F00_RS00965;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9F00_RS00965;old_locus_tag=C9F00_00980
NZ_PYKC01000004.1	Protein Homology	CDS	10704	13931	.	+	0	ID=cds-WP_001126310.1;Parent=gene-C9F00_RS00965;Dbxref=GenBank:WP_001126310.1;Name=WP_001126310.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9F00_RS00965;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126310.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	14205	14600	.	+	.	ID=gene-C9F00_RS00970;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9F00_RS00970;old_locus_tag=C9F00_00985
NZ_PYKC01000004.1	Protein Homology	CDS	14205	14600	.	+	0	ID=cds-WP_000333324.1;Parent=gene-C9F00_RS00970;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9F00_RS00970;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	14678	15274	.	-	.	ID=gene-C9F00_RS00975;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9F00_RS00975;old_locus_tag=C9F00_00990
NZ_PYKC01000004.1	Protein Homology	CDS	14678	15274	.	-	0	ID=cds-WP_000122863.1;Parent=gene-C9F00_RS00975;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9F00_RS00975;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	15384	16169	.	-	.	ID=gene-C9F00_RS00980;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9F00_RS00980;old_locus_tag=C9F00_00995
NZ_PYKC01000004.1	Protein Homology	CDS	15384	16169	.	-	0	ID=cds-WP_000004376.1;Parent=gene-C9F00_RS00980;Dbxref=GenBank:WP_000004376.1;Name=WP_000004376.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F00_RS00980;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004376.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	16223	17776	.	-	.	ID=gene-C9F00_RS00985;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9F00_RS00985;old_locus_tag=C9F00_01000
NZ_PYKC01000004.1	Protein Homology	CDS	16223	17776	.	-	0	ID=cds-WP_135369438.1;Parent=gene-C9F00_RS00985;Dbxref=GenBank:WP_135369438.1;Name=WP_135369438.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9F00_RS00985;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_135369438.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	17839	19056	.	-	.	ID=gene-C9F00_RS00990;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9F00_RS00990;old_locus_tag=C9F00_01005
NZ_PYKC01000004.1	Protein Homology	CDS	17839	19056	.	-	0	ID=cds-WP_001016212.1;Parent=gene-C9F00_RS00990;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9F00_RS00990;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	19168	20310	.	-	.	ID=gene-C9F00_RS00995;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9F00_RS00995;old_locus_tag=C9F00_01010
NZ_PYKC01000004.1	Protein Homology	CDS	19168	20310	.	-	0	ID=cds-WP_005124373.1;Parent=gene-C9F00_RS00995;Dbxref=GenBank:WP_005124373.1;Name=WP_005124373.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F00_RS00995;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_005124373.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	20345	21862	.	-	.	ID=gene-C9F00_RS01000;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9F00_RS01000;old_locus_tag=C9F00_01015
NZ_PYKC01000004.1	Protein Homology	CDS	20345	21862	.	-	0	ID=cds-WP_000787073.1;Parent=gene-C9F00_RS01000;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9F00_RS01000;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	22343	23113	.	+	.	ID=gene-C9F00_RS01005;Name=C9F00_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01005;old_locus_tag=C9F00_01020
NZ_PYKC01000004.1	Protein Homology	CDS	22343	23113	.	+	0	ID=cds-WP_071055485.1;Parent=gene-C9F00_RS01005;Dbxref=GenBank:WP_071055485.1;Name=WP_071055485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9F00_RS01005;product=electron transfer flavoprotein FixA;protein_id=WP_071055485.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	23129	24070	.	+	.	ID=gene-C9F00_RS01010;Name=C9F00_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01010;old_locus_tag=C9F00_01025
NZ_PYKC01000004.1	Protein Homology	CDS	23129	24070	.	+	0	ID=cds-WP_001032198.1;Parent=gene-C9F00_RS01010;Dbxref=GenBank:WP_001032198.1;Name=WP_001032198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9F00_RS01010;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032198.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	24120	25406	.	+	.	ID=gene-C9F00_RS01015;Name=C9F00_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01015;old_locus_tag=C9F00_01030
NZ_PYKC01000004.1	Protein Homology	CDS	24120	25406	.	+	0	ID=cds-WP_058108076.1;Parent=gene-C9F00_RS01015;Dbxref=GenBank:WP_058108076.1;Name=WP_058108076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9F00_RS01015;product=FAD-dependent oxidoreductase;protein_id=WP_058108076.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	25403	25690	.	+	.	ID=gene-C9F00_RS01020;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9F00_RS01020;old_locus_tag=C9F00_01035
NZ_PYKC01000004.1	Protein Homology	CDS	25403	25690	.	+	0	ID=cds-WP_000203736.1;Parent=gene-C9F00_RS01020;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9F00_RS01020;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	25837	27177	.	+	.	ID=gene-C9F00_RS01025;Name=C9F00_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01025;old_locus_tag=C9F00_01040
NZ_PYKC01000004.1	Protein Homology	CDS	25837	27177	.	+	0	ID=cds-WP_001187057.1;Parent=gene-C9F00_RS01025;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9F00_RS01025;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	27266	27496	.	+	.	ID=gene-C9F00_RS01030;Name=C9F00_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01030;old_locus_tag=C9F00_01045
NZ_PYKC01000004.1	Protein Homology	CDS	27266	27496	.	+	0	ID=cds-WP_001172089.1;Parent=gene-C9F00_RS01030;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9F00_RS01030;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	27790	28206	.	+	.	ID=gene-C9F00_RS01035;Name=C9F00_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01035;old_locus_tag=C9F00_01050
NZ_PYKC01000004.1	Protein Homology	CDS	27790	28206	.	+	0	ID=cds-WP_135369279.1;Parent=gene-C9F00_RS01035;Dbxref=GenBank:WP_135369279.1;Name=WP_135369279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9F00_RS01035;product=hypothetical protein;protein_id=WP_135369279.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	28430	28720	.	-	.	ID=gene-C9F00_RS01040;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9F00_RS01040;old_locus_tag=C9F00_01055
NZ_PYKC01000004.1	Protein Homology	CDS	28430	28720	.	-	0	ID=cds-WP_000745961.1;Parent=gene-C9F00_RS01040;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9F00_RS01040;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	29618	31507	.	+	.	ID=gene-C9F00_RS01045;Name=C9F00_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01045;old_locus_tag=C9F00_01065
NZ_PYKC01000004.1	Protein Homology	CDS	29618	31507	.	+	0	ID=cds-WP_000066315.1;Parent=gene-C9F00_RS01045;Dbxref=GenBank:WP_000066315.1;Name=WP_000066315.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9F00_RS01045;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066315.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	pseudogene	31859	31939	.	-	.	ID=gene-C9F00_RS24745;Name=C9F00_RS24745;end_range=31939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24745;old_locus_tag=C9F00_01075;partial=true;pseudo=true
NZ_PYKC01000004.1	Protein Homology	CDS	31859	31939	.	-	0	ID=cds-C9F00_RS24745;Parent=gene-C9F00_RS24745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=31939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F00_RS24745;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	32060	32590	.	+	.	ID=gene-C9F00_RS01050;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9F00_RS01050;old_locus_tag=C9F00_01080
NZ_PYKC01000004.1	Protein Homology	CDS	32060	32590	.	+	0	ID=cds-WP_000600709.1;Parent=gene-C9F00_RS01050;Dbxref=GenBank:WP_000600709.1;Name=WP_000600709.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9F00_RS01050;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600709.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	32583	34445	.	+	.	ID=gene-C9F00_RS01055;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=C9F00_RS01055;old_locus_tag=C9F00_01085
NZ_PYKC01000004.1	Protein Homology	CDS	32583	34445	.	+	0	ID=cds-WP_000377165.1;Parent=gene-C9F00_RS01055;Dbxref=GenBank:WP_000377165.1;Name=WP_000377165.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F00_RS01055;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377165.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	34643	35122	.	+	.	ID=gene-C9F00_RS01060;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9F00_RS01060;old_locus_tag=C9F00_01095
NZ_PYKC01000004.1	Protein Homology	CDS	34643	35122	.	+	0	ID=cds-WP_000624379.1;Parent=gene-C9F00_RS01060;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9F00_RS01060;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	35228	36076	.	-	.	ID=gene-C9F00_RS01065;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9F00_RS01065;old_locus_tag=C9F00_01100
NZ_PYKC01000004.1	Protein Homology	CDS	35228	36076	.	-	0	ID=cds-WP_000257211.1;Parent=gene-C9F00_RS01065;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9F00_RS01065;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	36087	36464	.	-	.	ID=gene-C9F00_RS01070;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9F00_RS01070;old_locus_tag=C9F00_01105
NZ_PYKC01000004.1	Protein Homology	CDS	36087	36464	.	-	0	ID=cds-WP_000610894.1;Parent=gene-C9F00_RS01070;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9F00_RS01070;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	36467	37288	.	-	.	ID=gene-C9F00_RS01075;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9F00_RS01075;old_locus_tag=C9F00_01110
NZ_PYKC01000004.1	Protein Homology	CDS	36467	37288	.	-	0	ID=cds-WP_001065397.1;Parent=gene-C9F00_RS01075;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9F00_RS01075;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	37285	38274	.	-	.	ID=gene-C9F00_RS01080;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9F00_RS01080;old_locus_tag=C9F00_01115
NZ_PYKC01000004.1	Protein Homology	CDS	37285	38274	.	-	0	ID=cds-WP_000093001.1;Parent=gene-C9F00_RS01080;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9F00_RS01080;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	38274	39560	.	-	.	ID=gene-C9F00_RS01085;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9F00_RS01085;old_locus_tag=C9F00_01120
NZ_PYKC01000004.1	Protein Homology	CDS	38274	39560	.	-	0	ID=cds-WP_000800482.1;Parent=gene-C9F00_RS01085;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9F00_RS01085;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	39614	41974	.	-	.	ID=gene-C9F00_RS01090;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9F00_RS01090;old_locus_tag=C9F00_01125
NZ_PYKC01000004.1	Protein Homology	CDS	39614	41974	.	-	0	ID=cds-WP_135369129.1;Parent=gene-C9F00_RS01090;Dbxref=GenBank:WP_135369129.1;Name=WP_135369129.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9F00_RS01090;product=LPS assembly protein LptD;protein_id=WP_135369129.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	42228	43040	.	+	.	ID=gene-C9F00_RS01095;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9F00_RS01095;old_locus_tag=C9F00_01130
NZ_PYKC01000004.1	Protein Homology	CDS	42228	43040	.	+	0	ID=cds-WP_001200595.1;Parent=gene-C9F00_RS01095;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9F00_RS01095;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	43135	43794	.	-	.	ID=gene-C9F00_RS01100;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9F00_RS01100;old_locus_tag=C9F00_01135
NZ_PYKC01000004.1	Protein Homology	CDS	43135	43794	.	-	0	ID=cds-WP_000525198.1;Parent=gene-C9F00_RS01100;Dbxref=GenBank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9F00_RS01100;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	43806	46712	.	-	.	ID=gene-C9F00_RS01105;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9F00_RS01105;old_locus_tag=C9F00_01140
NZ_PYKC01000004.1	Protein Homology	CDS	43806	46712	.	-	0	ID=cds-WP_001116966.1;Parent=gene-C9F00_RS01105;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9F00_RS01105;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	46886	49237	.	-	.	ID=gene-C9F00_RS01110;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9F00_RS01110;old_locus_tag=C9F00_01145
NZ_PYKC01000004.1	Protein Homology	CDS	46886	49237	.	-	0	ID=cds-WP_111742468.1;Parent=gene-C9F00_RS01110;Dbxref=GenBank:WP_111742468.1;Name=WP_111742468.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F00_RS01110;product=DNA polymerase II;protein_id=WP_111742468.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	49281	49901	.	-	.	ID=gene-C9F00_RS01115;Name=C9F00_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01115;old_locus_tag=C9F00_01150
NZ_PYKC01000004.1	Protein Homology	CDS	49281	49901	.	-	0	ID=cds-WP_135369130.1;Parent=gene-C9F00_RS01115;Dbxref=GenBank:WP_135369130.1;Name=WP_135369130.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9F00_RS01115;product=YdcF family protein;protein_id=WP_135369130.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	50419	50838	.	+	.	ID=gene-C9F00_RS01125;Name=C9F00_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01125;old_locus_tag=C9F00_01160
NZ_PYKC01000004.1	Protein Homology	CDS	50419	50838	.	+	0	ID=cds-WP_001103149.1;Parent=gene-C9F00_RS01125;Dbxref=GenBank:WP_001103149.1;Name=WP_001103149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9F00_RS01125;product=DUF4751 family protein;protein_id=WP_001103149.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	50844	51539	.	-	.	ID=gene-C9F00_RS01130;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F00_RS01130;old_locus_tag=C9F00_01165
NZ_PYKC01000004.1	Protein Homology	CDS	50844	51539	.	-	0	ID=cds-WP_000888684.1;Parent=gene-C9F00_RS01130;Dbxref=GenBank:WP_000888684.1;Name=WP_000888684.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9F00_RS01130;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888684.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	51680	53182	.	-	.	ID=gene-C9F00_RS01135;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9F00_RS01135;old_locus_tag=C9F00_01170
NZ_PYKC01000004.1	Protein Homology	CDS	51680	53182	.	-	0	ID=cds-WP_135369488.1;Parent=gene-C9F00_RS01135;Dbxref=GenBank:WP_135369488.1;Name=WP_135369488.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9F00_RS01135;product=L-arabinose isomerase;protein_id=WP_135369488.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	53193	54902	.	-	.	ID=gene-C9F00_RS01140;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9F00_RS01140;old_locus_tag=C9F00_01175
NZ_PYKC01000004.1	Protein Homology	CDS	53193	54902	.	-	0	ID=cds-WP_135369489.1;Parent=gene-C9F00_RS01140;Dbxref=GenBank:WP_135369489.1;Name=WP_135369489.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9F00_RS01140;product=ribulokinase;protein_id=WP_135369489.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	55243	56088	.	+	.	ID=gene-C9F00_RS01145;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9F00_RS01145;old_locus_tag=C9F00_01180
NZ_PYKC01000004.1	Protein Homology	CDS	55243	56088	.	+	0	ID=cds-WP_000852387.1;Parent=gene-C9F00_RS01145;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9F00_RS01145;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	56207	56974	.	+	.	ID=gene-C9F00_RS01150;Name=C9F00_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01150;old_locus_tag=C9F00_01185
NZ_PYKC01000004.1	Protein Homology	CDS	56207	56974	.	+	0	ID=cds-WP_001148372.1;Parent=gene-C9F00_RS01150;Dbxref=GenBank:WP_001148372.1;Name=WP_001148372.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9F00_RS01150;product=DedA family protein;protein_id=WP_001148372.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	57013	57720	.	-	.	ID=gene-C9F00_RS01155;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9F00_RS01155;old_locus_tag=C9F00_01190
NZ_PYKC01000004.1	Protein Homology	CDS	57013	57720	.	-	0	ID=cds-WP_023221144.1;Parent=gene-C9F00_RS01155;Dbxref=GenBank:WP_023221144.1;Name=WP_023221144.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9F00_RS01155;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_023221144.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	57704	59314	.	-	.	ID=gene-C9F00_RS01160;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9F00_RS01160;old_locus_tag=C9F00_01195
NZ_PYKC01000004.1	Protein Homology	CDS	57704	59314	.	-	0	ID=cds-WP_135369490.1;Parent=gene-C9F00_RS01160;Dbxref=GenBank:WP_135369490.1;Name=WP_135369490.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9F00_RS01160;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_135369490.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	59290	60273	.	-	.	ID=gene-C9F00_RS01165;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9F00_RS01165;old_locus_tag=C9F00_01200
NZ_PYKC01000004.1	Protein Homology	CDS	59290	60273	.	-	0	ID=cds-WP_000915326.1;Parent=gene-C9F00_RS01165;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9F00_RS01165;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11
NZ_PYKC01000004.1	cmsearch	riboswitch	60305	60404	.	-	.	ID=id-NZ_PYKC01000004.1:60305..60404;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000004.1	RefSeq	gene	60451	62109	.	-	.	ID=gene-C9F00_RS01170;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9F00_RS01170;old_locus_tag=C9F00_01205
NZ_PYKC01000004.1	Protein Homology	CDS	60451	62109	.	-	0	ID=cds-WP_001139028.1;Parent=gene-C9F00_RS01170;Dbxref=GenBank:WP_001139028.1;Name=WP_001139028.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9F00_RS01170;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139028.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	62202	62324	.	+	.	ID=gene-C9F00_RS01175;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=C9F00_RS01175;old_locus_tag=C9F00_01210
NZ_PYKC01000004.1	Protein Homology	CDS	62202	62324	.	+	0	ID=cds-WP_135369491.1;Parent=gene-C9F00_RS01175;Dbxref=GenBank:WP_135369491.1;Name=WP_135369491.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9F00_RS01175;product=glucose uptake inhibitor SgrT;protein_id=WP_135369491.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	62642	62923	.	+	.	ID=gene-C9F00_RS01180;Name=C9F00_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01180;old_locus_tag=C9F00_01215
NZ_PYKC01000004.1	Protein Homology	CDS	62642	62923	.	+	0	ID=cds-WP_000755258.1;Parent=gene-C9F00_RS01180;Dbxref=GenBank:WP_000755258.1;Name=WP_000755258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=C9F00_RS01180;product=DUF5339 family protein;protein_id=WP_000755258.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	62977	63582	.	-	.	ID=gene-C9F00_RS01185;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F00_RS01185;old_locus_tag=C9F00_01220
NZ_PYKC01000004.1	Protein Homology	CDS	62977	63582	.	-	0	ID=cds-WP_000818261.1;Parent=gene-C9F00_RS01185;Dbxref=GenBank:WP_000818261.1;Name=WP_000818261.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9F00_RS01185;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818261.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	63593	64993	.	-	.	ID=gene-C9F00_RS01190;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F00_RS01190;old_locus_tag=C9F00_01225
NZ_PYKC01000004.1	Protein Homology	CDS	63593	64993	.	-	0	ID=cds-WP_001140634.1;Parent=gene-C9F00_RS01190;Dbxref=GenBank:WP_001140634.1;Name=WP_001140634.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9F00_RS01190;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140634.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	64996	66087	.	-	.	ID=gene-C9F00_RS01195;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9F00_RS01195;old_locus_tag=C9F00_01230
NZ_PYKC01000004.1	Protein Homology	CDS	64996	66087	.	-	0	ID=cds-WP_000042336.1;Parent=gene-C9F00_RS01195;Dbxref=GenBank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9F00_RS01195;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11
NZ_PYKC01000004.1	RefSeq	gene	66087	66888	.	-	.	ID=gene-C9F00_RS01200;Name=C9F00_RS01200;end_range=66888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01200;old_locus_tag=C9F00_01235;partial=true
NZ_PYKC01000004.1	Protein Homology	CDS	66087	66888	.	-	1	ID=cds-WP_280954428.1;Parent=gene-C9F00_RS01200;Dbxref=GenBank:WP_280954428.1;Name=WP_280954428.1;Ontology_term=GO:0009098,GO:0003852;end_range=66888,.;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F00_RS01200;partial=true;product=alpha-isopropylmalate synthase regulatory domain-containing protein;protein_id=WP_280954428.1;transl_table=11
##sequence-region NZ_PYKC01000054.1 1 153916
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000054.1	RefSeq	region	1	153916	.	+	.	ID=NZ_PYKC01000054.1:1..153916;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000054.1	RefSeq	gene	1	79	.	+	.	ID=gene-C9F00_RS24800;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS24800;partial=true;start_range=.,1
NZ_PYKC01000054.1	cmsearch	rRNA	1	79	.	+	.	ID=rna-C9F00_RS24800;Parent=gene-C9F00_RS24800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24800;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000054.1	cmsearch	exon	1	79	.	+	.	ID=exon-C9F00_RS24800-1;Parent=rna-C9F00_RS24800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24800;partial=true;product=5S ribosomal RNA;start_range=.,1
NZ_PYKC01000054.1	RefSeq	gene	383	898	.	-	.	ID=gene-C9F00_RS08345;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9F00_RS08345;old_locus_tag=C9F00_08520
NZ_PYKC01000054.1	Protein Homology	CDS	383	898	.	-	0	ID=cds-WP_010989085.1;Parent=gene-C9F00_RS08345;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9F00_RS08345;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	895	1479	.	-	.	ID=gene-C9F00_RS08350;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9F00_RS08350;old_locus_tag=C9F00_08525
NZ_PYKC01000054.1	Protein Homology	CDS	895	1479	.	-	0	ID=cds-WP_001046891.1;Parent=gene-C9F00_RS08350;Dbxref=GenBank:WP_001046891.1;Name=WP_001046891.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9F00_RS08350;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046891.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	1549	1818	.	+	.	ID=gene-C9F00_RS08355;Name=C9F00_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08355;old_locus_tag=C9F00_08530
NZ_PYKC01000054.1	Protein Homology	CDS	1549	1818	.	+	0	ID=cds-WP_000649858.1;Parent=gene-C9F00_RS08355;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9F00_RS08355;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	1898	2884	.	+	.	ID=gene-C9F00_RS08360;Name=C9F00_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08360;old_locus_tag=C9F00_08535
NZ_PYKC01000054.1	Protein Homology	CDS	1898	2884	.	+	0	ID=cds-WP_000999264.1;Parent=gene-C9F00_RS08360;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9F00_RS08360;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	2901	3524	.	+	.	ID=gene-C9F00_RS08365;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9F00_RS08365;old_locus_tag=C9F00_08540
NZ_PYKC01000054.1	Protein Homology	CDS	2901	3524	.	+	0	ID=cds-WP_000725364.1;Parent=gene-C9F00_RS08365;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9F00_RS08365;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	3537	4445	.	-	.	ID=gene-C9F00_RS08370;Name=C9F00_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08370;old_locus_tag=C9F00_08545
NZ_PYKC01000054.1	Protein Homology	CDS	3537	4445	.	-	0	ID=cds-WP_079802097.1;Parent=gene-C9F00_RS08370;Dbxref=GenBank:WP_079802097.1;Name=WP_079802097.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954815.1;locus_tag=C9F00_RS08370;product=acyltransferase;protein_id=WP_079802097.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	4833	7619	.	+	.	ID=gene-C9F00_RS08380;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9F00_RS08380;old_locus_tag=C9F00_08555
NZ_PYKC01000054.1	Protein Homology	CDS	4833	7619	.	+	0	ID=cds-WP_079928028.1;Parent=gene-C9F00_RS08380;Dbxref=GenBank:WP_079928028.1;Name=WP_079928028.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9F00_RS08380;product=DNA polymerase I;protein_id=WP_079928028.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	7958	8593	.	-	.	ID=gene-C9F00_RS08385;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9F00_RS08385;old_locus_tag=C9F00_08560
NZ_PYKC01000054.1	Protein Homology	CDS	7958	8593	.	-	0	ID=cds-WP_001651150.1;Parent=gene-C9F00_RS08385;Dbxref=GenBank:WP_001651150.1;Name=WP_001651150.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9F00_RS08385;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001651150.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	8833	9057	.	+	.	ID=gene-C9F00_RS08390;Name=C9F00_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08390;old_locus_tag=C9F00_08565
NZ_PYKC01000054.1	Protein Homology	CDS	8833	9057	.	+	0	ID=cds-WP_001541209.1;Parent=gene-C9F00_RS08390;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9F00_RS08390;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	9176	9691	.	+	.	ID=gene-C9F00_RS08395;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9F00_RS08395;old_locus_tag=C9F00_08570
NZ_PYKC01000054.1	Protein Homology	CDS	9176	9691	.	+	0	ID=cds-WP_000743292.1;Parent=gene-C9F00_RS08395;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9F00_RS08395;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	9880	11253	.	+	.	ID=gene-C9F00_RS08400;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9F00_RS08400;old_locus_tag=C9F00_08575
NZ_PYKC01000054.1	Protein Homology	CDS	9880	11253	.	+	0	ID=cds-WP_000003527.1;Parent=gene-C9F00_RS08400;Dbxref=GenBank:WP_000003527.1;Name=WP_000003527.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9F00_RS08400;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003527.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	11343	11453	.	-	.	ID=gene-C9F00_RS08405;Name=C9F00_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08405;old_locus_tag=C9F00_08580
NZ_PYKC01000054.1	Protein Homology	CDS	11343	11453	.	-	0	ID=cds-WP_001578131.1;Parent=gene-C9F00_RS08405;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9F00_RS08405;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	11566	12975	.	-	.	ID=gene-C9F00_RS08410;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9F00_RS08410;old_locus_tag=C9F00_08585
NZ_PYKC01000054.1	Protein Homology	CDS	11566	12975	.	-	0	ID=cds-WP_001188782.1;Parent=gene-C9F00_RS08410;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9F00_RS08410;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	12984	14033	.	-	.	ID=gene-C9F00_RS08415;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9F00_RS08415;old_locus_tag=C9F00_08590
NZ_PYKC01000054.1	Protein Homology	CDS	12984	14033	.	-	0	ID=cds-WP_000146194.1;Parent=gene-C9F00_RS08415;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9F00_RS08415;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	14308	15717	.	-	.	ID=gene-C9F00_RS08425;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9F00_RS08425;old_locus_tag=C9F00_08600
NZ_PYKC01000054.1	Protein Homology	CDS	14308	15717	.	-	0	ID=cds-WP_001271699.1;Parent=gene-C9F00_RS08425;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F00_RS08425;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	16093	17916	.	+	.	ID=gene-C9F00_RS08430;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9F00_RS08430;old_locus_tag=C9F00_08610
NZ_PYKC01000054.1	Protein Homology	CDS	16093	17916	.	+	0	ID=cds-WP_000572064.1;Parent=gene-C9F00_RS08430;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9F00_RS08430;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	17971	18705	.	-	.	ID=gene-C9F00_RS08435;Name=C9F00_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08435;old_locus_tag=C9F00_08615
NZ_PYKC01000054.1	Protein Homology	CDS	17971	18705	.	-	0	ID=cds-WP_023250031.1;Parent=gene-C9F00_RS08435;Dbxref=GenBank:WP_023250031.1;Name=WP_023250031.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9F00_RS08435;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_023250031.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	18690	19568	.	-	.	ID=gene-C9F00_RS08440;Name=C9F00_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08440;old_locus_tag=C9F00_08620
NZ_PYKC01000054.1	Protein Homology	CDS	18690	19568	.	-	0	ID=cds-WP_094885034.1;Parent=gene-C9F00_RS08440;Dbxref=GenBank:WP_094885034.1;Name=WP_094885034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9F00_RS08440;product=STM4011 family radical SAM protein;protein_id=WP_094885034.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	19565	20806	.	-	.	ID=gene-C9F00_RS08445;Name=C9F00_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08445;old_locus_tag=C9F00_08625
NZ_PYKC01000054.1	Protein Homology	CDS	19565	20806	.	-	0	ID=cds-WP_135369694.1;Parent=gene-C9F00_RS08445;Dbxref=GenBank:WP_135369694.1;Name=WP_135369694.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9F00_RS08445;product=STM4012 family radical SAM protein;protein_id=WP_135369694.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	20808	21683	.	-	.	ID=gene-C9F00_RS08450;Name=C9F00_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08450;old_locus_tag=C9F00_08630
NZ_PYKC01000054.1	Protein Homology	CDS	20808	21683	.	-	0	ID=cds-WP_135369695.1;Parent=gene-C9F00_RS08450;Dbxref=GenBank:WP_135369695.1;Name=WP_135369695.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9F00_RS08450;product=STM4013/SEN3800 family hydrolase;protein_id=WP_135369695.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	21676	22701	.	-	.	ID=gene-C9F00_RS08455;Name=C9F00_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08455;old_locus_tag=C9F00_08635
NZ_PYKC01000054.1	Protein Homology	CDS	21676	22701	.	-	0	ID=cds-WP_135369696.1;Parent=gene-C9F00_RS08455;Dbxref=GenBank:WP_135369696.1;Name=WP_135369696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9F00_RS08455;product=STM4014 family protein;protein_id=WP_135369696.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	22714	23562	.	-	.	ID=gene-C9F00_RS08460;Name=C9F00_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08460;old_locus_tag=C9F00_08640
NZ_PYKC01000054.1	Protein Homology	CDS	22714	23562	.	-	0	ID=cds-WP_135369697.1;Parent=gene-C9F00_RS08460;Dbxref=GenBank:WP_135369697.1;Name=WP_135369697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9F00_RS08460;product=STM4015 family protein;protein_id=WP_135369697.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	23719	24411	.	-	.	ID=gene-C9F00_RS08465;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9F00_RS08465;old_locus_tag=C9F00_08645
NZ_PYKC01000054.1	Protein Homology	CDS	23719	24411	.	-	0	ID=cds-WP_000838829.1;Parent=gene-C9F00_RS08465;Dbxref=GenBank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9F00_RS08465;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	24479	25897	.	-	.	ID=gene-C9F00_RS08470;Name=C9F00_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08470;old_locus_tag=C9F00_08650
NZ_PYKC01000054.1	Protein Homology	CDS	24479	25897	.	-	0	ID=cds-WP_001112785.1;Parent=gene-C9F00_RS08470;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9F00_RS08470;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	25943	27325	.	-	.	ID=gene-C9F00_RS08475;Name=C9F00_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08475;old_locus_tag=C9F00_08655
NZ_PYKC01000054.1	Protein Homology	CDS	25943	27325	.	-	0	ID=cds-WP_000084233.1;Parent=gene-C9F00_RS08475;Dbxref=GenBank:WP_000084233.1;Name=WP_000084233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=C9F00_RS08475;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	27371	29407	.	-	.	ID=gene-C9F00_RS08480;Name=C9F00_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08480;old_locus_tag=C9F00_08660
NZ_PYKC01000054.1	Protein Homology	CDS	27371	29407	.	-	0	ID=cds-WP_135369698.1;Parent=gene-C9F00_RS08480;Dbxref=GenBank:WP_135369698.1;Name=WP_135369698.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9F00_RS08480;product=alpha-glucosidase;protein_id=WP_135369698.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	29531	30406	.	-	.	ID=gene-C9F00_RS08485;Name=C9F00_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08485;old_locus_tag=C9F00_08665
NZ_PYKC01000054.1	Protein Homology	CDS	29531	30406	.	-	0	ID=cds-WP_000345334.1;Parent=gene-C9F00_RS08485;Dbxref=GenBank:WP_000345334.1;Name=WP_000345334.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9F00_RS08485;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	30495	31397	.	-	.	ID=gene-C9F00_RS08490;Name=C9F00_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08490;old_locus_tag=C9F00_08670
NZ_PYKC01000054.1	Protein Homology	CDS	30495	31397	.	-	0	ID=cds-WP_024131638.1;Parent=gene-C9F00_RS08490;Dbxref=GenBank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=C9F00_RS08490;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	31469	32710	.	-	.	ID=gene-C9F00_RS08495;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9F00_RS08495;old_locus_tag=C9F00_08675
NZ_PYKC01000054.1	Protein Homology	CDS	31469	32710	.	-	0	ID=cds-WP_000870940.1;Parent=gene-C9F00_RS08495;Dbxref=GenBank:WP_000870940.1;Name=WP_000870940.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=C9F00_RS08495;product=sulfoquinovose isomerase;protein_id=WP_000870940.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	32726	33604	.	-	.	ID=gene-C9F00_RS08500;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=C9F00_RS08500;old_locus_tag=C9F00_08680
NZ_PYKC01000054.1	Protein Homology	CDS	32726	33604	.	-	0	ID=cds-WP_135369784.1;Parent=gene-C9F00_RS08500;Dbxref=GenBank:WP_135369784.1;Name=WP_135369784.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9F00_RS08500;product=sulfofructosephosphate aldolase;protein_id=WP_135369784.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	33627	34523	.	-	.	ID=gene-C9F00_RS08505;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9F00_RS08505;old_locus_tag=C9F00_08685
NZ_PYKC01000054.1	Protein Homology	CDS	33627	34523	.	-	0	ID=cds-WP_000268248.1;Parent=gene-C9F00_RS08505;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9F00_RS08505;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	34688	35584	.	+	.	ID=gene-C9F00_RS08510;Name=C9F00_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08510;old_locus_tag=C9F00_08690
NZ_PYKC01000054.1	Protein Homology	CDS	34688	35584	.	+	0	ID=cds-WP_001520529.1;Parent=gene-C9F00_RS08510;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9F00_RS08510;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	35618	36421	.	+	.	ID=gene-C9F00_RS08515;Name=C9F00_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08515;old_locus_tag=C9F00_08695
NZ_PYKC01000054.1	Protein Homology	CDS	35618	36421	.	+	0	ID=cds-WP_000059693.1;Parent=gene-C9F00_RS08515;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9F00_RS08515;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	36612	37211	.	+	.	ID=gene-C9F00_RS08520;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9F00_RS08520;old_locus_tag=C9F00_08700
NZ_PYKC01000054.1	Protein Homology	CDS	36612	37211	.	+	0	ID=cds-WP_000965698.1;Parent=gene-C9F00_RS08520;Dbxref=GenBank:WP_000965698.1;Name=WP_000965698.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9F00_RS08520;product=glucose-1-phosphatase;protein_id=WP_000965698.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	37205	38077	.	+	.	ID=gene-C9F00_RS08525;Name=C9F00_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08525;old_locus_tag=C9F00_08705
NZ_PYKC01000054.1	Protein Homology	CDS	37205	38077	.	+	0	ID=cds-WP_000921423.1;Parent=gene-C9F00_RS08525;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9F00_RS08525;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	38074	38511	.	+	.	ID=gene-C9F00_RS08530;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9F00_RS08530;old_locus_tag=C9F00_08710
NZ_PYKC01000054.1	Protein Homology	CDS	38074	38511	.	+	0	ID=cds-WP_000560974.1;Parent=gene-C9F00_RS08530;Dbxref=GenBank:WP_000560974.1;Name=WP_000560974.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9F00_RS08530;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560974.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	38556	39497	.	+	.	ID=gene-C9F00_RS08535;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9F00_RS08535;old_locus_tag=C9F00_08715
NZ_PYKC01000054.1	Protein Homology	CDS	38556	39497	.	+	0	ID=cds-WP_001518251.1;Parent=gene-C9F00_RS08535;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9F00_RS08535;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	39512	39958	.	-	.	ID=gene-C9F00_RS08540;Name=C9F00_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08540;old_locus_tag=C9F00_08720
NZ_PYKC01000054.1	Protein Homology	CDS	39512	39958	.	-	0	ID=cds-WP_031609809.1;Parent=gene-C9F00_RS08540;Dbxref=GenBank:WP_031609809.1;Name=WP_031609809.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=C9F00_RS08540;product=helix-turn-helix domain-containing protein;protein_id=WP_031609809.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	39955	40266	.	-	.	ID=gene-C9F00_RS08545;Name=C9F00_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08545;old_locus_tag=C9F00_08725
NZ_PYKC01000054.1	Protein Homology	CDS	39955	40266	.	-	0	ID=cds-WP_000558166.1;Parent=gene-C9F00_RS08545;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9F00_RS08545;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	40352	41281	.	-	.	ID=gene-C9F00_RS08550;Name=C9F00_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08550;old_locus_tag=C9F00_08730
NZ_PYKC01000054.1	Protein Homology	CDS	40352	41281	.	-	0	ID=cds-WP_135369783.1;Parent=gene-C9F00_RS08550;Dbxref=GenBank:WP_135369783.1;Name=WP_135369783.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9F00_RS08550;product=alpha/beta hydrolase;protein_id=WP_135369783.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	41499	41810	.	+	.	ID=gene-C9F00_RS08555;Name=C9F00_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08555;old_locus_tag=C9F00_08735
NZ_PYKC01000054.1	Protein Homology	CDS	41499	41810	.	+	0	ID=cds-WP_001159632.1;Parent=gene-C9F00_RS08555;Dbxref=GenBank:WP_001159632.1;Name=WP_001159632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9F00_RS08555;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159632.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	41811	42101	.	+	.	ID=gene-C9F00_RS08560;Name=C9F00_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08560;old_locus_tag=C9F00_08740
NZ_PYKC01000054.1	Protein Homology	CDS	41811	42101	.	+	0	ID=cds-WP_000362050.1;Parent=gene-C9F00_RS08560;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=C9F00_RS08560;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	42148	43077	.	-	.	ID=gene-C9F00_RS08565;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9F00_RS08565;old_locus_tag=C9F00_08745
NZ_PYKC01000054.1	Protein Homology	CDS	42148	43077	.	-	0	ID=cds-WP_000027730.1;Parent=gene-C9F00_RS08565;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F00_RS08565;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	43074	43709	.	-	.	ID=gene-C9F00_RS08570;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=C9F00_RS08570;old_locus_tag=C9F00_08750
NZ_PYKC01000054.1	Protein Homology	CDS	43074	43709	.	-	0	ID=cds-WP_000829025.1;Parent=gene-C9F00_RS08570;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9F00_RS08570;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	43706	44608	.	-	.	ID=gene-C9F00_RS08575;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F00_RS08575;old_locus_tag=C9F00_08755
NZ_PYKC01000054.1	Protein Homology	CDS	43706	44608	.	-	0	ID=cds-WP_135492244.1;Parent=gene-C9F00_RS08575;Dbxref=GenBank:WP_135492244.1;Name=WP_135492244.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9F00_RS08575;product=formate dehydrogenase subunit beta;protein_id=WP_135492244.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	44621	47671	.	-	.	ID=gene-C9F00_RS08580;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9F00_RS08580;old_locus_tag=C9F00_08760
NZ_PYKC01000054.1	Protein Homology	CDS	44621	47671	.	-	0	ID=cds-WP_077248424.1;Parent=gene-C9F00_RS08580;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F00_RS08580;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:complement(47084..47086)%2Caa:Sec);transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	47866	48702	.	+	.	ID=gene-C9F00_RS08585;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9F00_RS08585;old_locus_tag=C9F00_08765
NZ_PYKC01000054.1	Protein Homology	CDS	47866	48702	.	+	0	ID=cds-WP_001059744.1;Parent=gene-C9F00_RS08585;Dbxref=GenBank:WP_001059744.1;Name=WP_001059744.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9F00_RS08585;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059744.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	48978	50009	.	-	.	ID=gene-C9F00_RS08590;Name=C9F00_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08590;old_locus_tag=C9F00_08770
NZ_PYKC01000054.1	Protein Homology	CDS	48978	50009	.	-	0	ID=cds-WP_000710967.1;Parent=gene-C9F00_RS08590;Dbxref=GenBank:WP_000710967.1;Name=WP_000710967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9F00_RS08590;product=YiiG family protein;protein_id=WP_000710967.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	50192	51292	.	+	.	ID=gene-C9F00_RS08595;Name=C9F00_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08595;old_locus_tag=C9F00_08775
NZ_PYKC01000054.1	Protein Homology	CDS	50192	51292	.	+	0	ID=cds-WP_000828048.1;Parent=gene-C9F00_RS08595;Dbxref=GenBank:WP_000828048.1;Name=WP_000828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9F00_RS08595;product=YiiG family protein;protein_id=WP_000828048.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	51647	51970	.	-	.	ID=gene-C9F00_RS08600;Name=C9F00_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08600;old_locus_tag=C9F00_08780
NZ_PYKC01000054.1	Protein Homology	CDS	51647	51970	.	-	0	ID=cds-WP_000527676.1;Parent=gene-C9F00_RS08600;Dbxref=GenBank:WP_000527676.1;Name=WP_000527676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9F00_RS08600;product=AzlD domain-containing protein;protein_id=WP_000527676.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	51970	52629	.	-	.	ID=gene-C9F00_RS08605;Name=C9F00_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08605;old_locus_tag=C9F00_08785
NZ_PYKC01000054.1	Protein Homology	CDS	51970	52629	.	-	0	ID=cds-WP_000683586.1;Parent=gene-C9F00_RS08605;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9F00_RS08605;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	52730	53278	.	+	.	ID=gene-C9F00_RS08610;Name=C9F00_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08610;old_locus_tag=C9F00_08790
NZ_PYKC01000054.1	Protein Homology	CDS	52730	53278	.	+	0	ID=cds-WP_210114160.1;Parent=gene-C9F00_RS08610;Dbxref=GenBank:WP_210114160.1;Name=WP_210114160.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9F00_RS08610;product=helix-turn-helix domain-containing protein;protein_id=WP_210114160.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	53367	53681	.	-	.	ID=gene-C9F00_RS08615;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9F00_RS08615;old_locus_tag=C9F00_08795
NZ_PYKC01000054.1	Protein Homology	CDS	53367	53681	.	-	0	ID=cds-WP_000619477.1;Parent=gene-C9F00_RS08615;Dbxref=GenBank:WP_000619477.1;Name=WP_000619477.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9F00_RS08615;product=L-rhamnose mutarotase;protein_id=WP_000619477.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	53678	54826	.	-	.	ID=gene-C9F00_RS08620;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9F00_RS08620;old_locus_tag=C9F00_08800
NZ_PYKC01000054.1	Protein Homology	CDS	53678	54826	.	-	0	ID=cds-WP_000009253.1;Parent=gene-C9F00_RS08620;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9F00_RS08620;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	54953	55780	.	-	.	ID=gene-C9F00_RS08625;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9F00_RS08625;old_locus_tag=C9F00_08805
NZ_PYKC01000054.1	Protein Homology	CDS	54953	55780	.	-	0	ID=cds-WP_001179685.1;Parent=gene-C9F00_RS08625;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9F00_RS08625;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	55923	57182	.	-	.	ID=gene-C9F00_RS08630;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=C9F00_RS08630;old_locus_tag=C9F00_08810
NZ_PYKC01000054.1	Protein Homology	CDS	55923	57182	.	-	0	ID=cds-WP_000211471.1;Parent=gene-C9F00_RS08630;Dbxref=GenBank:WP_000211471.1;Name=WP_000211471.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9F00_RS08630;product=L-rhamnose isomerase;protein_id=WP_000211471.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	57179	58648	.	-	.	ID=gene-C9F00_RS08635;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9F00_RS08635;old_locus_tag=C9F00_08815
NZ_PYKC01000054.1	Protein Homology	CDS	57179	58648	.	-	0	ID=cds-WP_061375796.1;Parent=gene-C9F00_RS08635;Dbxref=GenBank:WP_061375796.1;Name=WP_061375796.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9F00_RS08635;product=rhamnulokinase;protein_id=WP_061375796.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	58936	59772	.	+	.	ID=gene-C9F00_RS08640;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9F00_RS08640;old_locus_tag=C9F00_08820
NZ_PYKC01000054.1	Protein Homology	CDS	58936	59772	.	+	0	ID=cds-WP_000217108.1;Parent=gene-C9F00_RS08640;Dbxref=GenBank:WP_000217108.1;Name=WP_000217108.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9F00_RS08640;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217108.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	59925	60773	.	+	.	ID=gene-C9F00_RS08645;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9F00_RS08645;old_locus_tag=C9F00_08825
NZ_PYKC01000054.1	Protein Homology	CDS	59925	60773	.	+	0	ID=cds-WP_000013292.1;Parent=gene-C9F00_RS08645;Dbxref=GenBank:WP_000013292.1;Name=WP_000013292.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9F00_RS08645;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013292.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	60770	61804	.	-	.	ID=gene-C9F00_RS08650;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9F00_RS08650;old_locus_tag=C9F00_08830
NZ_PYKC01000054.1	Protein Homology	CDS	60770	61804	.	-	0	ID=cds-WP_000063533.1;Parent=gene-C9F00_RS08650;Dbxref=GenBank:WP_000063533.1;Name=WP_000063533.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9F00_RS08650;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063533.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	62423	63106	.	+	.	ID=gene-C9F00_RS08655;Name=C9F00_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08655;old_locus_tag=C9F00_08835
NZ_PYKC01000054.1	Protein Homology	CDS	62423	63106	.	+	0	ID=cds-WP_000378721.1;Parent=gene-C9F00_RS08655;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9F00_RS08655;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	63264	64571	.	-	.	ID=gene-C9F00_RS08660;Name=C9F00_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08660;old_locus_tag=C9F00_08840
NZ_PYKC01000054.1	Protein Homology	CDS	63264	64571	.	-	0	ID=cds-WP_000566800.1;Parent=gene-C9F00_RS08660;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9F00_RS08660;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	64564	65079	.	-	.	ID=gene-C9F00_RS08665;Name=C9F00_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08665;old_locus_tag=C9F00_08845
NZ_PYKC01000054.1	Protein Homology	CDS	64564	65079	.	-	0	ID=cds-WP_001091413.1;Parent=gene-C9F00_RS08665;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9F00_RS08665;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	65098	66081	.	-	.	ID=gene-C9F00_RS08670;Name=C9F00_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08670;old_locus_tag=C9F00_08850
NZ_PYKC01000054.1	Protein Homology	CDS	65098	66081	.	-	0	ID=cds-WP_135369581.1;Parent=gene-C9F00_RS08670;Dbxref=GenBank:WP_135369581.1;Name=WP_135369581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9F00_RS08670;product=TRAP transporter substrate-binding protein;protein_id=WP_135369581.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	66410	67030	.	+	.	ID=gene-C9F00_RS08675;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9F00_RS08675;old_locus_tag=C9F00_08855
NZ_PYKC01000054.1	Protein Homology	CDS	66410	67030	.	+	0	ID=cds-WP_000122632.1;Parent=gene-C9F00_RS08675;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9F00_RS08675;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	67100	67789	.	+	.	ID=gene-C9F00_RS08680;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9F00_RS08680;old_locus_tag=C9F00_08860
NZ_PYKC01000054.1	Protein Homology	CDS	67100	67789	.	+	0	ID=cds-WP_000559229.1;Parent=gene-C9F00_RS08680;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9F00_RS08680;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	67801	68196	.	+	.	ID=gene-C9F00_RS08685;Name=C9F00_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08685;old_locus_tag=C9F00_08865
NZ_PYKC01000054.1	Protein Homology	CDS	67801	68196	.	+	0	ID=cds-WP_000133442.1;Parent=gene-C9F00_RS08685;Dbxref=GenBank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9F00_RS08685;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	68317	68520	.	+	.	ID=gene-C9F00_RS08690;Name=C9F00_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08690;old_locus_tag=C9F00_08870
NZ_PYKC01000054.1	Protein Homology	CDS	68317	68520	.	+	0	ID=cds-WP_000338671.1;Parent=gene-C9F00_RS08690;Dbxref=GenBank:WP_000338671.1;Name=WP_000338671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9F00_RS08690;product=hypothetical protein;protein_id=WP_000338671.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	68568	69941	.	-	.	ID=gene-C9F00_RS08695;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9F00_RS08695;old_locus_tag=C9F00_08875
NZ_PYKC01000054.1	Protein Homology	CDS	68568	69941	.	-	0	ID=cds-WP_000580402.1;Parent=gene-C9F00_RS08695;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9F00_RS08695;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	69938	70636	.	-	.	ID=gene-C9F00_RS08700;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=C9F00_RS08700;old_locus_tag=C9F00_08880
NZ_PYKC01000054.1	Protein Homology	CDS	69938	70636	.	-	0	ID=cds-WP_001033731.1;Parent=gene-C9F00_RS08700;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9F00_RS08700;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	70787	71287	.	+	.	ID=gene-C9F00_RS08705;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9F00_RS08705;old_locus_tag=C9F00_08885
NZ_PYKC01000054.1	Protein Homology	CDS	70787	71287	.	+	0	ID=cds-WP_001233463.1;Parent=gene-C9F00_RS08705;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9F00_RS08705;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	71436	72338	.	+	.	ID=gene-C9F00_RS08710;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9F00_RS08710;old_locus_tag=C9F00_08890
NZ_PYKC01000054.1	Protein Homology	CDS	71436	72338	.	+	0	ID=cds-WP_001077320.1;Parent=gene-C9F00_RS08710;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9F00_RS08710;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	72523	73485	.	+	.	ID=gene-C9F00_RS08715;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9F00_RS08715;old_locus_tag=C9F00_08895
NZ_PYKC01000054.1	Protein Homology	CDS	72523	73485	.	+	0	ID=cds-WP_000591793.1;Parent=gene-C9F00_RS08715;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9F00_RS08715;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	73689	74678	.	+	.	ID=gene-C9F00_RS08720;Name=C9F00_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08720;old_locus_tag=C9F00_08900
NZ_PYKC01000054.1	Protein Homology	CDS	73689	74678	.	+	0	ID=cds-WP_000758711.1;Parent=gene-C9F00_RS08720;Dbxref=GenBank:WP_000758711.1;Name=WP_000758711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9F00_RS08720;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758711.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	74779	75534	.	+	.	ID=gene-C9F00_RS08725;Name=C9F00_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08725;old_locus_tag=C9F00_08905
NZ_PYKC01000054.1	Protein Homology	CDS	74779	75534	.	+	0	ID=cds-WP_135369580.1;Parent=gene-C9F00_RS08725;Dbxref=GenBank:WP_135369580.1;Name=WP_135369580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9F00_RS08725;product=CDP-diacylglycerol diphosphatase;protein_id=WP_135369580.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	75798	77132	.	+	.	ID=gene-C9F00_RS08730;Name=C9F00_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08730;old_locus_tag=C9F00_08910
NZ_PYKC01000054.1	Protein Homology	CDS	75798	77132	.	+	0	ID=cds-WP_000777314.1;Parent=gene-C9F00_RS08730;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F00_RS08730;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	77143	78102	.	+	.	ID=gene-C9F00_RS08735;Name=C9F00_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08735;old_locus_tag=C9F00_08915
NZ_PYKC01000054.1	Protein Homology	CDS	77143	78102	.	+	0	ID=cds-WP_135369579.1;Parent=gene-C9F00_RS08735;Dbxref=GenBank:WP_135369579.1;Name=WP_135369579.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9F00_RS08735;product=aminoimidazole riboside kinase;protein_id=WP_135369579.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	78112	79152	.	+	.	ID=gene-C9F00_RS08740;Name=C9F00_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08740;old_locus_tag=C9F00_08920
NZ_PYKC01000054.1	Protein Homology	CDS	78112	79152	.	+	0	ID=cds-WP_000557881.1;Parent=gene-C9F00_RS08740;Dbxref=GenBank:WP_000557881.1;Name=WP_000557881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9F00_RS08740;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557881.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	79215	79937	.	+	.	ID=gene-C9F00_RS08745;Name=C9F00_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08745;old_locus_tag=C9F00_08925
NZ_PYKC01000054.1	Protein Homology	CDS	79215	79937	.	+	0	ID=cds-WP_001535809.1;Parent=gene-C9F00_RS08745;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9F00_RS08745;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	pseudogene	80035	80160	.	+	.	ID=gene-C9F00_RS24190;Name=C9F00_RS24190;end_range=80160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24190;old_locus_tag=C9F00_08930;partial=true;pseudo=true
NZ_PYKC01000054.1	Protein Homology	CDS	80035	80160	.	+	0	ID=cds-C9F00_RS24190;Parent=gene-C9F00_RS24190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=80160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=C9F00_RS24190;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000054.1	RefSeq	pseudogene	80212	80352	.	+	.	ID=gene-C9F00_RS24195;Name=C9F00_RS24195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24195;old_locus_tag=C9F00_08935;partial=true;pseudo=true;start_range=.,80212
NZ_PYKC01000054.1	Protein Homology	CDS	80212	80352	.	+	0	ID=cds-C9F00_RS24195;Parent=gene-C9F00_RS24195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9F00_RS24195;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;start_range=.,80212;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	80442	80792	.	-	.	ID=gene-C9F00_RS08760;Name=C9F00_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08760;old_locus_tag=C9F00_08940
NZ_PYKC01000054.1	Protein Homology	CDS	80442	80792	.	-	0	ID=cds-WP_001173083.1;Parent=gene-C9F00_RS08760;Dbxref=GenBank:WP_001173083.1;Name=WP_001173083.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9F00_RS08760;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	80806	82398	.	-	.	ID=gene-C9F00_RS08765;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9F00_RS08765;old_locus_tag=C9F00_08945
NZ_PYKC01000054.1	Protein Homology	CDS	80806	82398	.	-	0	ID=cds-WP_000113084.1;Parent=gene-C9F00_RS08765;Dbxref=GenBank:WP_000113084.1;Name=WP_000113084.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9F00_RS08765;product=autoinducer-2 kinase;protein_id=WP_000113084.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	82485	83444	.	-	.	ID=gene-C9F00_RS08770;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9F00_RS08770;old_locus_tag=C9F00_08950
NZ_PYKC01000054.1	Protein Homology	CDS	82485	83444	.	-	0	ID=cds-WP_001283049.1;Parent=gene-C9F00_RS08770;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9F00_RS08770;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	83700	85235	.	+	.	ID=gene-C9F00_RS08775;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=C9F00_RS08775;old_locus_tag=C9F00_08955
NZ_PYKC01000054.1	Protein Homology	CDS	83700	85235	.	+	0	ID=cds-WP_001167250.1;Parent=gene-C9F00_RS08775;Dbxref=GenBank:WP_001167250.1;Name=WP_001167250.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9F00_RS08775;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167250.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	85229	86272	.	+	.	ID=gene-C9F00_RS08780;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9F00_RS08780;old_locus_tag=C9F00_08960
NZ_PYKC01000054.1	Protein Homology	CDS	85229	86272	.	+	0	ID=cds-WP_000911134.1;Parent=gene-C9F00_RS08780;Dbxref=GenBank:WP_000911134.1;Name=WP_000911134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9F00_RS08780;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911134.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	86269	87270	.	+	.	ID=gene-C9F00_RS08785;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9F00_RS08785;old_locus_tag=C9F00_08965
NZ_PYKC01000054.1	Protein Homology	CDS	86269	87270	.	+	0	ID=cds-WP_000981831.1;Parent=gene-C9F00_RS08785;Dbxref=GenBank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9F00_RS08785;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	87299	88321	.	+	.	ID=gene-C9F00_RS08790;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9F00_RS08790;old_locus_tag=C9F00_08970
NZ_PYKC01000054.1	Protein Homology	CDS	87299	88321	.	+	0	ID=cds-WP_000090737.1;Parent=gene-C9F00_RS08790;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9F00_RS08790;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	88350	89225	.	+	.	ID=gene-C9F00_RS08795;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9F00_RS08795;old_locus_tag=C9F00_08975
NZ_PYKC01000054.1	Protein Homology	CDS	88350	89225	.	+	0	ID=cds-WP_000774148.1;Parent=gene-C9F00_RS08795;Dbxref=GenBank:WP_000774148.1;Name=WP_000774148.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9F00_RS08795;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774148.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	89308	89598	.	+	.	ID=gene-C9F00_RS08800;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9F00_RS08800;old_locus_tag=C9F00_08980
NZ_PYKC01000054.1	Protein Homology	CDS	89308	89598	.	+	0	ID=cds-WP_001543603.1;Parent=gene-C9F00_RS08800;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9F00_RS08800;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	89608	90372	.	+	.	ID=gene-C9F00_RS08805;Name=C9F00_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08805;old_locus_tag=C9F00_08985
NZ_PYKC01000054.1	Protein Homology	CDS	89608	90372	.	+	0	ID=cds-WP_135369519.1;Parent=gene-C9F00_RS08805;Dbxref=GenBank:WP_135369519.1;Name=WP_135369519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9F00_RS08805;product=epimerase;protein_id=WP_135369519.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	90464	91231	.	-	.	ID=gene-C9F00_RS08810;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9F00_RS08810;old_locus_tag=C9F00_08990
NZ_PYKC01000054.1	Protein Homology	CDS	90464	91231	.	-	0	ID=cds-WP_001216339.1;Parent=gene-C9F00_RS08810;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9F00_RS08810;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	91344	91940	.	-	.	ID=gene-C9F00_RS08815;Name=C9F00_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08815;old_locus_tag=C9F00_08995
NZ_PYKC01000054.1	Protein Homology	CDS	91344	91940	.	-	0	ID=cds-WP_000802241.1;Parent=gene-C9F00_RS08815;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9F00_RS08815;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	92041	92469	.	+	.	ID=gene-C9F00_RS08820;Name=C9F00_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08820;old_locus_tag=C9F00_09000
NZ_PYKC01000054.1	Protein Homology	CDS	92041	92469	.	+	0	ID=cds-WP_000155233.1;Parent=gene-C9F00_RS08820;Dbxref=GenBank:WP_000155233.1;Name=WP_000155233.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=C9F00_RS08820;product=DUF805 domain-containing protein;protein_id=WP_000155233.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	92575	93321	.	-	.	ID=gene-C9F00_RS08825;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9F00_RS08825;old_locus_tag=C9F00_09005
NZ_PYKC01000054.1	Protein Homology	CDS	92575	93321	.	-	0	ID=cds-WP_000796303.1;Parent=gene-C9F00_RS08825;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9F00_RS08825;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	93418	94428	.	-	.	ID=gene-C9F00_RS08830;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9F00_RS08830;old_locus_tag=C9F00_09010
NZ_PYKC01000054.1	Protein Homology	CDS	93418	94428	.	-	0	ID=cds-WP_001250617.1;Parent=gene-C9F00_RS08830;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9F00_RS08830;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	94540	96048	.	-	.	ID=gene-C9F00_RS08835;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9F00_RS08835;old_locus_tag=C9F00_09015
NZ_PYKC01000054.1	Protein Homology	CDS	94540	96048	.	-	0	ID=cds-WP_001523753.1;Parent=gene-C9F00_RS08835;Dbxref=GenBank:WP_001523753.1;Name=WP_001523753.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9F00_RS08835;product=glycerol kinase GlpK;protein_id=WP_001523753.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	96069	96914	.	-	.	ID=gene-C9F00_RS08840;Name=C9F00_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08840;old_locus_tag=C9F00_09020
NZ_PYKC01000054.1	Protein Homology	CDS	96069	96914	.	-	0	ID=cds-WP_000084285.1;Parent=gene-C9F00_RS08840;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9F00_RS08840;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	97313	97552	.	+	.	ID=gene-C9F00_RS08845;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9F00_RS08845;old_locus_tag=C9F00_09025
NZ_PYKC01000054.1	Protein Homology	CDS	97313	97552	.	+	0	ID=cds-WP_000051370.1;Parent=gene-C9F00_RS08845;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9F00_RS08845;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	97774	98259	.	-	.	ID=gene-C9F00_RS08850;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9F00_RS08850;old_locus_tag=C9F00_09030
NZ_PYKC01000054.1	Protein Homology	CDS	97774	98259	.	-	0	ID=cds-WP_000872918.1;Parent=gene-C9F00_RS08850;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9F00_RS08850;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	98352	99281	.	-	.	ID=gene-C9F00_RS08855;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9F00_RS08855;old_locus_tag=C9F00_09035
NZ_PYKC01000054.1	Protein Homology	CDS	98352	99281	.	-	0	ID=cds-WP_000139639.1;Parent=gene-C9F00_RS08855;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9F00_RS08855;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	99348	100679	.	-	.	ID=gene-C9F00_RS08860;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F00_RS08860;old_locus_tag=C9F00_09040
NZ_PYKC01000054.1	Protein Homology	CDS	99348	100679	.	-	0	ID=cds-WP_050068037.1;Parent=gene-C9F00_RS08860;Dbxref=GenBank:WP_050068037.1;Name=WP_050068037.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F00_RS08860;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_050068037.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	100689	101219	.	-	.	ID=gene-C9F00_RS08865;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9F00_RS08865;old_locus_tag=C9F00_09045
NZ_PYKC01000054.1	Protein Homology	CDS	100689	101219	.	-	0	ID=cds-WP_000208240.1;Parent=gene-C9F00_RS08865;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9F00_RS08865;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	101311	102297	.	-	.	ID=gene-C9F00_RS08870;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9F00_RS08870;old_locus_tag=C9F00_09050
NZ_PYKC01000054.1	Protein Homology	CDS	101311	102297	.	-	0	ID=cds-WP_000068803.1;Parent=gene-C9F00_RS08870;Dbxref=GenBank:WP_000068803.1;Name=WP_000068803.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9F00_RS08870;product=cell division protein FtsN;protein_id=WP_000068803.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	102391	103416	.	-	.	ID=gene-C9F00_RS08875;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9F00_RS08875;old_locus_tag=C9F00_09055
NZ_PYKC01000054.1	Protein Homology	CDS	102391	103416	.	-	0	ID=cds-WP_000841337.1;Parent=gene-C9F00_RS08875;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9F00_RS08875;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	103571	105769	.	-	.	ID=gene-C9F00_RS08880;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9F00_RS08880;old_locus_tag=C9F00_09060
NZ_PYKC01000054.1	Protein Homology	CDS	103571	105769	.	-	0	ID=cds-WP_020437544.1;Parent=gene-C9F00_RS08880;Dbxref=GenBank:WP_020437544.1;Name=WP_020437544.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9F00_RS08880;product=primosomal protein N';protein_id=WP_020437544.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	105973	106185	.	+	.	ID=gene-C9F00_RS08885;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9F00_RS08885;old_locus_tag=C9F00_09065
NZ_PYKC01000054.1	Protein Homology	CDS	105973	106185	.	+	0	ID=cds-WP_000715284.1;Parent=gene-C9F00_RS08885;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9F00_RS08885;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	106230	106892	.	-	.	ID=gene-C9F00_RS08890;Name=C9F00_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08890;old_locus_tag=C9F00_09070
NZ_PYKC01000054.1	Protein Homology	CDS	106230	106892	.	-	0	ID=cds-WP_000792803.1;Parent=gene-C9F00_RS08890;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9F00_RS08890;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	107093	108883	.	-	.	ID=gene-C9F00_RS08895;Name=C9F00_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08895;old_locus_tag=C9F00_09075
NZ_PYKC01000054.1	Protein Homology	CDS	107093	108883	.	-	0	ID=cds-WP_000899644.1;Parent=gene-C9F00_RS08895;Dbxref=GenBank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9F00_RS08895;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	109339	109656	.	-	.	ID=gene-C9F00_RS08900;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9F00_RS08900;old_locus_tag=C9F00_09080
NZ_PYKC01000054.1	Protein Homology	CDS	109339	109656	.	-	0	ID=cds-WP_000852811.1;Parent=gene-C9F00_RS08900;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9F00_RS08900;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	109921	111081	.	+	.	ID=gene-C9F00_RS08905;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=C9F00_RS08905;old_locus_tag=C9F00_09085
NZ_PYKC01000054.1	Protein Homology	CDS	109921	111081	.	+	0	ID=cds-WP_000197216.1;Parent=gene-C9F00_RS08905;Dbxref=GenBank:WP_000197216.1;Name=WP_000197216.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9F00_RS08905;product=cystathionine gamma-synthase;protein_id=WP_000197216.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	111084	113516	.	+	.	ID=gene-C9F00_RS08910;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=C9F00_RS08910;old_locus_tag=C9F00_09090
NZ_PYKC01000054.1	Protein Homology	CDS	111084	113516	.	+	0	ID=cds-WP_000110811.1;Parent=gene-C9F00_RS08910;Dbxref=GenBank:WP_000110811.1;Name=WP_000110811.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9F00_RS08910;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110811.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	113632	114489	.	-	.	ID=gene-C9F00_RS08915;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9F00_RS08915;old_locus_tag=C9F00_09095
NZ_PYKC01000054.1	Protein Homology	CDS	113632	114489	.	-	0	ID=cds-WP_000398249.1;Parent=gene-C9F00_RS08915;Dbxref=GenBank:WP_000398249.1;Name=WP_000398249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9F00_RS08915;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398249.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	114492	115490	.	-	.	ID=gene-C9F00_RS08920;Name=C9F00_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08920;old_locus_tag=C9F00_09100
NZ_PYKC01000054.1	Protein Homology	CDS	114492	115490	.	-	0	ID=cds-WP_135369096.1;Parent=gene-C9F00_RS08920;Dbxref=GenBank:WP_135369096.1;Name=WP_135369096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9F00_RS08920;product=hypothetical protein;protein_id=WP_135369096.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	115725	116849	.	-	.	ID=gene-C9F00_RS08925;Name=C9F00_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08925;old_locus_tag=C9F00_09105
NZ_PYKC01000054.1	Protein Homology	CDS	115725	116849	.	-	0	ID=cds-WP_001134811.1;Parent=gene-C9F00_RS08925;Dbxref=GenBank:WP_001134811.1;Name=WP_001134811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9F00_RS08925;product=hypothetical protein;protein_id=WP_001134811.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	116985	118541	.	+	.	ID=gene-C9F00_RS08930;Name=C9F00_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08930;old_locus_tag=C9F00_09110
NZ_PYKC01000054.1	Protein Homology	CDS	116985	118541	.	+	0	ID=cds-WP_000865261.1;Parent=gene-C9F00_RS08930;Dbxref=GenBank:WP_000865261.1;Name=WP_000865261.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F00_RS08930;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865261.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	118736	119626	.	+	.	ID=gene-C9F00_RS08935;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9F00_RS08935;old_locus_tag=C9F00_09115
NZ_PYKC01000054.1	Protein Homology	CDS	118736	119626	.	+	0	ID=cds-WP_000007507.1;Parent=gene-C9F00_RS08935;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9F00_RS08935;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	119791	121971	.	+	.	ID=gene-C9F00_RS08940;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9F00_RS08940;old_locus_tag=C9F00_09120
NZ_PYKC01000054.1	Protein Homology	CDS	119791	121971	.	+	0	ID=cds-WP_000108105.1;Parent=gene-C9F00_RS08940;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9F00_RS08940;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	122029	122652	.	-	.	ID=gene-C9F00_RS08945;Name=C9F00_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08945;old_locus_tag=C9F00_09125
NZ_PYKC01000054.1	Protein Homology	CDS	122029	122652	.	-	0	ID=cds-WP_135369095.1;Parent=gene-C9F00_RS08945;Dbxref=GenBank:WP_135369095.1;Name=WP_135369095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9F00_RS08945;product=DUF1287 domain-containing protein;protein_id=WP_135369095.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	122911	124014	.	-	.	ID=gene-C9F00_RS08950;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9F00_RS08950;old_locus_tag=C9F00_09130
NZ_PYKC01000054.1	Protein Homology	CDS	122911	124014	.	-	0	ID=cds-WP_000374031.1;Parent=gene-C9F00_RS08950;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9F00_RS08950;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	124026	124688	.	-	.	ID=gene-C9F00_RS08955;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9F00_RS08955;old_locus_tag=C9F00_09135
NZ_PYKC01000054.1	Protein Homology	CDS	124026	124688	.	-	0	ID=cds-WP_000424866.1;Parent=gene-C9F00_RS08955;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9F00_RS08955;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	124699	127200	.	-	.	ID=gene-C9F00_RS08960;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F00_RS08960;old_locus_tag=C9F00_09140
NZ_PYKC01000054.1	Protein Homology	CDS	124699	127200	.	-	0	ID=cds-WP_135369094.1;Parent=gene-C9F00_RS08960;Dbxref=GenBank:WP_135369094.1;Name=WP_135369094.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=C9F00_RS08960;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_135369094.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	127510	128589	.	+	.	ID=gene-C9F00_RS08965;Name=C9F00_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08965;old_locus_tag=C9F00_09145
NZ_PYKC01000054.1	Protein Homology	CDS	127510	128589	.	+	0	ID=cds-WP_000661597.1;Parent=gene-C9F00_RS08965;Dbxref=GenBank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9F00_RS08965;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	128604	128924	.	+	.	ID=gene-C9F00_RS08970;Name=C9F00_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08970;old_locus_tag=C9F00_09150
NZ_PYKC01000054.1	Protein Homology	CDS	128604	128924	.	+	0	ID=cds-WP_000161258.1;Parent=gene-C9F00_RS08970;Dbxref=GenBank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=C9F00_RS08970;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	129023	131320	.	+	.	ID=gene-C9F00_RS08975;Name=C9F00_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08975;old_locus_tag=C9F00_09155
NZ_PYKC01000054.1	Protein Homology	CDS	129023	131320	.	+	0	ID=cds-WP_000149714.1;Parent=gene-C9F00_RS08975;Dbxref=GenBank:WP_000149714.1;Name=WP_000149714.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=C9F00_RS08975;product=formate C-acetyltransferase;protein_id=WP_000149714.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	131286	132164	.	+	.	ID=gene-C9F00_RS08980;Name=C9F00_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08980;old_locus_tag=C9F00_09160
NZ_PYKC01000054.1	Protein Homology	CDS	131286	132164	.	+	0	ID=cds-WP_135492246.1;Parent=gene-C9F00_RS08980;Dbxref=GenBank:WP_135492246.1;Name=WP_135492246.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9F00_RS08980;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_135492246.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	132166	132519	.	+	.	ID=gene-C9F00_RS08985;Name=C9F00_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08985;old_locus_tag=C9F00_09165
NZ_PYKC01000054.1	Protein Homology	CDS	132166	132519	.	+	0	ID=cds-WP_000290522.1;Parent=gene-C9F00_RS08985;Dbxref=GenBank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=C9F00_RS08985;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	132506	133357	.	-	.	ID=gene-C9F00_RS08990;Name=C9F00_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08990;old_locus_tag=C9F00_09170
NZ_PYKC01000054.1	Protein Homology	CDS	132506	133357	.	-	0	ID=cds-WP_000274596.1;Parent=gene-C9F00_RS08990;Dbxref=GenBank:WP_000274596.1;Name=WP_000274596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=C9F00_RS08990;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274596.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	133518	135251	.	-	.	ID=gene-C9F00_RS08995;Name=C9F00_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08995;old_locus_tag=C9F00_09175
NZ_PYKC01000054.1	Protein Homology	CDS	133518	135251	.	-	0	ID=cds-WP_058145360.1;Parent=gene-C9F00_RS08995;Dbxref=GenBank:WP_058145360.1;Name=WP_058145360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9F00_RS08995;product=phosphoethanolamine transferase CptA;protein_id=WP_058145360.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	135462	138113	.	-	.	ID=gene-C9F00_RS09000;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9F00_RS09000;old_locus_tag=C9F00_09180
NZ_PYKC01000054.1	Protein Homology	CDS	135462	138113	.	-	0	ID=cds-WP_001005548.1;Parent=gene-C9F00_RS09000;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9F00_RS09000;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	138482	139633	.	-	.	ID=gene-C9F00_RS09005;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9F00_RS09005;old_locus_tag=C9F00_09190
NZ_PYKC01000054.1	Protein Homology	CDS	138482	139633	.	-	0	ID=cds-WP_000800208.1;Parent=gene-C9F00_RS09005;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9F00_RS09005;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	139722	140726	.	+	.	ID=gene-C9F00_RS09010;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=C9F00_RS09010;old_locus_tag=C9F00_09195
NZ_PYKC01000054.1	Protein Homology	CDS	139722	140726	.	+	0	ID=cds-WP_000935336.1;Parent=gene-C9F00_RS09010;Dbxref=GenBank:WP_000935336.1;Name=WP_000935336.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9F00_RS09010;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935336.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	140734	141510	.	+	.	ID=gene-C9F00_RS09015;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9F00_RS09015;old_locus_tag=C9F00_09200
NZ_PYKC01000054.1	Protein Homology	CDS	140734	141510	.	+	0	ID=cds-WP_135492248.1;Parent=gene-C9F00_RS09015;Dbxref=GenBank:WP_135492248.1;Name=WP_135492248.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9F00_RS09015;product=acetylglutamate kinase;protein_id=WP_135492248.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	141628	143004	.	+	.	ID=gene-C9F00_RS09020;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9F00_RS09020;old_locus_tag=C9F00_09205
NZ_PYKC01000054.1	Protein Homology	CDS	141628	143004	.	+	0	ID=cds-WP_001230048.1;Parent=gene-C9F00_RS09020;Dbxref=GenBank:WP_001230048.1;Name=WP_001230048.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9F00_RS09020;product=argininosuccinate lyase;protein_id=WP_001230048.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	143290	144207	.	+	.	ID=gene-C9F00_RS09025;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9F00_RS09025;old_locus_tag=C9F00_09215
NZ_PYKC01000054.1	Protein Homology	CDS	143290	144207	.	+	0	ID=cds-WP_001025919.1;Parent=gene-C9F00_RS09025;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9F00_RS09025;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	144190	145590	.	-	.	ID=gene-C9F00_RS09030;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9F00_RS09030;old_locus_tag=C9F00_09220
NZ_PYKC01000054.1	Protein Homology	CDS	144190	145590	.	-	0	ID=cds-WP_001120791.1;Parent=gene-C9F00_RS09030;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9F00_RS09030;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	145789	146424	.	+	.	ID=gene-C9F00_RS09035;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9F00_RS09035;old_locus_tag=C9F00_09230
NZ_PYKC01000054.1	Protein Homology	CDS	145789	146424	.	+	0	ID=cds-WP_000971958.1;Parent=gene-C9F00_RS09035;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9F00_RS09035;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	146440	146799	.	+	.	ID=gene-C9F00_RS09040;Name=C9F00_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09040;old_locus_tag=C9F00_09235
NZ_PYKC01000054.1	Protein Homology	CDS	146440	146799	.	+	0	ID=cds-WP_000813838.1;Parent=gene-C9F00_RS09040;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9F00_RS09040;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	146846	147946	.	-	.	ID=gene-C9F00_RS09045;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9F00_RS09045;old_locus_tag=C9F00_09240
NZ_PYKC01000054.1	Protein Homology	CDS	146846	147946	.	-	0	ID=cds-WP_000186981.1;Parent=gene-C9F00_RS09045;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9F00_RS09045;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11
NZ_PYKC01000054.1	cmsearch	riboswitch	148061	148253	.	+	.	ID=id-NZ_PYKC01000054.1:148061..148253;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000054.1	RefSeq	gene	148320	150164	.	+	.	ID=gene-C9F00_RS09050;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9F00_RS09050;old_locus_tag=C9F00_09245
NZ_PYKC01000054.1	Protein Homology	CDS	148320	150164	.	+	0	ID=cds-WP_135369093.1;Parent=gene-C9F00_RS09050;Dbxref=GenBank:WP_135369093.1;Name=WP_135369093.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9F00_RS09050;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_135369093.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	150109	150960	.	+	.	ID=gene-C9F00_RS09055;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9F00_RS09055;old_locus_tag=C9F00_09250
NZ_PYKC01000054.1	Protein Homology	CDS	150109	150960	.	+	0	ID=cds-WP_000201805.1;Parent=gene-C9F00_RS09055;Dbxref=GenBank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9F00_RS09055;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11
NZ_PYKC01000054.1	RefSeq	gene	151340	152881	.	+	.	ID=gene-C9F00_RS09060;Name=C9F00_RS09060;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F00_RS09060;old_locus_tag=C9F00_09255
NZ_PYKC01000054.1	cmsearch	rRNA	151340	152881	.	+	.	ID=rna-C9F00_RS09060;Parent=gene-C9F00_RS09060;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS09060;product=16S ribosomal RNA
NZ_PYKC01000054.1	cmsearch	exon	151340	152881	.	+	.	ID=exon-C9F00_RS09060-1;Parent=rna-C9F00_RS09060;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS09060;product=16S ribosomal RNA
NZ_PYKC01000054.1	RefSeq	gene	152951	153027	.	+	.	ID=gene-C9F00_RS09065;Name=C9F00_RS09065;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS09065;old_locus_tag=C9F00_09260
NZ_PYKC01000054.1	tRNAscan-SE	tRNA	152951	153027	.	+	.	ID=rna-C9F00_RS09065;Parent=gene-C9F00_RS09065;anticodon=(pos:152985..152987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09065;product=tRNA-Ile
NZ_PYKC01000054.1	tRNAscan-SE	exon	152951	153027	.	+	.	ID=exon-C9F00_RS09065-1;Parent=rna-C9F00_RS09065;anticodon=(pos:152985..152987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09065;product=tRNA-Ile
NZ_PYKC01000054.1	RefSeq	gene	153139	153214	.	+	.	ID=gene-C9F00_RS09070;Name=C9F00_RS09070;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS09070;old_locus_tag=C9F00_09265
NZ_PYKC01000054.1	tRNAscan-SE	tRNA	153139	153214	.	+	.	ID=rna-C9F00_RS09070;Parent=gene-C9F00_RS09070;anticodon=(pos:153172..153174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09070;product=tRNA-Ala
NZ_PYKC01000054.1	tRNAscan-SE	exon	153139	153214	.	+	.	ID=exon-C9F00_RS09070-1;Parent=rna-C9F00_RS09070;anticodon=(pos:153172..153174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS09070;product=tRNA-Ala
NZ_PYKC01000054.1	RefSeq	gene	153397	153916	.	+	.	ID=gene-C9F00_RS09075;Name=C9F00_RS09075;end_range=153916,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F00_RS09075;old_locus_tag=C9F00_09270;partial=true
NZ_PYKC01000054.1	cmsearch	rRNA	153397	153916	.	+	.	ID=rna-C9F00_RS09075;Parent=gene-C9F00_RS09075;Dbxref=RFAM:RF02541;end_range=153916,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS09075;partial=true;product=23S ribosomal RNA
NZ_PYKC01000054.1	cmsearch	exon	153397	153916	.	+	.	ID=exon-C9F00_RS09075-1;Parent=rna-C9F00_RS09075;Dbxref=RFAM:RF02541;end_range=153916,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS09075;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PYKC01000116.1 1 2130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000116.1	RefSeq	region	1	2130	.	+	.	ID=NZ_PYKC01000116.1:1..2130;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000116.1	RefSeq	gene	27	308	.	+	.	ID=gene-C9F00_RS18120;Name=C9F00_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18120;old_locus_tag=C9F00_18565
NZ_PYKC01000116.1	Protein Homology	CDS	27	308	.	+	0	ID=cds-WP_135369532.1;Parent=gene-C9F00_RS18120;Dbxref=GenBank:WP_135369532.1;Name=WP_135369532.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF014368.6;locus_tag=C9F00_RS18120;product=PTS sugar transporter subunit IIB;protein_id=WP_135369532.1;transl_table=11
NZ_PYKC01000116.1	RefSeq	gene	317	1711	.	+	.	ID=gene-C9F00_RS18125;Name=C9F00_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18125;old_locus_tag=C9F00_18570
NZ_PYKC01000116.1	Protein Homology	CDS	317	1711	.	+	0	ID=cds-WP_024147325.1;Parent=gene-C9F00_RS18125;Dbxref=GenBank:WP_024147325.1;Name=WP_024147325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304938.1;locus_tag=C9F00_RS18125;product=PTS galactitol transporter subunit IIC;protein_id=WP_024147325.1;transl_table=11
NZ_PYKC01000116.1	RefSeq	gene	1789	2130	.	+	.	ID=gene-C9F00_RS18130;Name=C9F00_RS18130;end_range=2130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18130;old_locus_tag=C9F00_18575;partial=true
NZ_PYKC01000116.1	Protein Homology	CDS	1789	2130	.	+	0	ID=cds-WP_245306396.1;Parent=gene-C9F00_RS18130;Dbxref=GenBank:WP_245306396.1;Name=WP_245306396.1;Ontology_term=GO:0005975,GO:0016301;end_range=2130,.;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012589.6;locus_tag=C9F00_RS18130;partial=true;product=FGGY family carbohydrate kinase;protein_id=WP_245306396.1;transl_table=11
##sequence-region NZ_PYKC01000132.1 1 66160
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000132.1	RefSeq	region	1	66160	.	+	.	ID=NZ_PYKC01000132.1:1..66160;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000132.1	RefSeq	gene	1	158	.	-	.	ID=gene-C9F00_RS20020;Name=C9F00_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20020;old_locus_tag=C9F00_20490;partial=true;start_range=.,1
NZ_PYKC01000132.1	Protein Homology	CDS	1	158	.	-	0	ID=cds-WP_167850723.1;Parent=gene-C9F00_RS20020;Dbxref=GenBank:WP_167850723.1;Name=WP_167850723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9F00_RS20020;partial=true;product=universal stress protein;protein_id=WP_167850723.1;start_range=.,1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	546	881	.	+	.	ID=gene-C9F00_RS20025;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9F00_RS20025;old_locus_tag=C9F00_20495
NZ_PYKC01000132.1	Protein Homology	CDS	546	881	.	+	0	ID=cds-WP_000626193.1;Parent=gene-C9F00_RS20025;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9F00_RS20025;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	1022	2518	.	-	.	ID=gene-C9F00_RS20030;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9F00_RS20030;old_locus_tag=C9F00_20500
NZ_PYKC01000132.1	Protein Homology	CDS	1022	2518	.	-	0	ID=cds-WP_000902764.1;Parent=gene-C9F00_RS20030;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9F00_RS20030;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	2749	3945	.	+	.	ID=gene-C9F00_RS20035;Name=C9F00_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20035;old_locus_tag=C9F00_20505
NZ_PYKC01000132.1	Protein Homology	CDS	2749	3945	.	+	0	ID=cds-WP_135369632.1;Parent=gene-C9F00_RS20035;Dbxref=GenBank:WP_135369632.1;Name=WP_135369632.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9F00_RS20035;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_135369632.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	4251	5318	.	+	.	ID=gene-C9F00_RS20040;Name=C9F00_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20040;old_locus_tag=C9F00_20510
NZ_PYKC01000132.1	Protein Homology	CDS	4251	5318	.	+	0	ID=cds-WP_000359836.1;Parent=gene-C9F00_RS20040;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9F00_RS20040;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	5315	8056	.	+	.	ID=gene-C9F00_RS20045;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9F00_RS20045;old_locus_tag=C9F00_20515
NZ_PYKC01000132.1	Protein Homology	CDS	5315	8056	.	+	0	ID=cds-WP_135369631.1;Parent=gene-C9F00_RS20045;Dbxref=GenBank:WP_135369631.1;Name=WP_135369631.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=C9F00_RS20045;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_135369631.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	8056	9180	.	+	.	ID=gene-C9F00_RS20050;Name=C9F00_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20050;old_locus_tag=C9F00_20520
NZ_PYKC01000132.1	Protein Homology	CDS	8056	9180	.	+	0	ID=cds-WP_001214765.1;Parent=gene-C9F00_RS20050;Dbxref=GenBank:WP_001214765.1;Name=WP_001214765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F00_RS20050;product=ABC transporter permease;protein_id=WP_001214765.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	9282	9683	.	-	.	ID=gene-C9F00_RS20055;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9F00_RS20055;old_locus_tag=C9F00_20525
NZ_PYKC01000132.1	Protein Homology	CDS	9282	9683	.	-	0	ID=cds-WP_135369630.1;Parent=gene-C9F00_RS20055;Dbxref=GenBank:WP_135369630.1;Name=WP_135369630.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9F00_RS20055;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_135369630.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	9775	10353	.	-	.	ID=gene-C9F00_RS20060;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9F00_RS20060;old_locus_tag=C9F00_20530
NZ_PYKC01000132.1	Protein Homology	CDS	9775	10353	.	-	0	ID=cds-WP_045342439.1;Parent=gene-C9F00_RS20060;Dbxref=GenBank:WP_045342439.1;Name=WP_045342439.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9F00_RS20060;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_045342439.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	10405	11454	.	-	.	ID=gene-C9F00_RS20065;Name=C9F00_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20065;old_locus_tag=C9F00_20535
NZ_PYKC01000132.1	Protein Homology	CDS	10405	11454	.	-	0	ID=cds-WP_000179589.1;Parent=gene-C9F00_RS20065;Dbxref=GenBank:WP_000179589.1;Name=WP_000179589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9F00_RS20065;product=AI-2E family transporter;protein_id=WP_000179589.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	11544	12803	.	+	.	ID=gene-C9F00_RS20070;Name=C9F00_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20070;old_locus_tag=C9F00_20540
NZ_PYKC01000132.1	Protein Homology	CDS	11544	12803	.	+	0	ID=cds-WP_077248389.1;Parent=gene-C9F00_RS20070;Dbxref=GenBank:WP_077248389.1;Name=WP_077248389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9F00_RS20070;product=MFS transporter;protein_id=WP_077248389.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	12807	13364	.	-	.	ID=gene-C9F00_RS20075;Name=C9F00_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20075;old_locus_tag=C9F00_20545
NZ_PYKC01000132.1	Protein Homology	CDS	12807	13364	.	-	0	ID=cds-WP_021000870.1;Parent=gene-C9F00_RS20075;Dbxref=GenBank:WP_021000870.1;Name=WP_021000870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9F00_RS20075;product=DcrB family lipoprotein;protein_id=WP_021000870.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	13437	14102	.	-	.	ID=gene-C9F00_RS20080;Name=C9F00_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20080;old_locus_tag=C9F00_20550
NZ_PYKC01000132.1	Protein Homology	CDS	13437	14102	.	-	0	ID=cds-WP_000187489.1;Parent=gene-C9F00_RS20080;Dbxref=GenBank:WP_000187489.1;Name=WP_000187489.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9F00_RS20080;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_000187489.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	14272	14517	.	+	.	ID=gene-C9F00_RS20085;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9F00_RS20085;old_locus_tag=C9F00_20555
NZ_PYKC01000132.1	Protein Homology	CDS	14272	14517	.	+	0	ID=cds-WP_001541054.1;Parent=gene-C9F00_RS20085;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9F00_RS20085;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	14541	16184	.	-	.	ID=gene-C9F00_RS20090;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=C9F00_RS20090;old_locus_tag=C9F00_20560
NZ_PYKC01000132.1	Protein Homology	CDS	14541	16184	.	-	0	ID=cds-WP_000789678.1;Parent=gene-C9F00_RS20090;Dbxref=GenBank:WP_000789678.1;Name=WP_000789678.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9F00_RS20090;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789678.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	16384	18582	.	-	.	ID=gene-C9F00_RS20095;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9F00_RS20095;old_locus_tag=C9F00_20565
NZ_PYKC01000132.1	Protein Homology	CDS	16384	18582	.	-	0	ID=cds-WP_135369629.1;Parent=gene-C9F00_RS20095;Dbxref=GenBank:WP_135369629.1;Name=WP_135369629.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=C9F00_RS20095;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_135369629.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	18663	19289	.	-	.	ID=gene-C9F00_RS20100;Name=C9F00_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20100;old_locus_tag=C9F00_20570
NZ_PYKC01000132.1	Protein Homology	CDS	18663	19289	.	-	0	ID=cds-WP_000964735.1;Parent=gene-C9F00_RS20100;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9F00_RS20100;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	19431	19802	.	+	.	ID=gene-C9F00_RS20105;Name=C9F00_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20105;old_locus_tag=C9F00_20575
NZ_PYKC01000132.1	Protein Homology	CDS	19431	19802	.	+	0	ID=cds-WP_000042851.1;Parent=gene-C9F00_RS20105;Dbxref=GenBank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9F00_RS20105;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	19824	20093	.	-	.	ID=gene-C9F00_RS20110;Name=C9F00_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20110;old_locus_tag=C9F00_20580
NZ_PYKC01000132.1	Protein Homology	CDS	19824	20093	.	-	0	ID=cds-WP_167850410.1;Parent=gene-C9F00_RS20110;Dbxref=GenBank:WP_167850410.1;Name=WP_167850410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9F00_RS20110;product=DUF1145 family protein;protein_id=WP_167850410.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	20083	20679	.	-	.	ID=gene-C9F00_RS20115;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9F00_RS20115;old_locus_tag=C9F00_20585
NZ_PYKC01000132.1	Protein Homology	CDS	20083	20679	.	-	0	ID=cds-WP_023243431.1;Parent=gene-C9F00_RS20115;Dbxref=GenBank:WP_023243431.1;Name=WP_023243431.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9F00_RS20115;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_023243431.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	20805	22280	.	+	.	ID=gene-C9F00_RS20120;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=C9F00_RS20120;old_locus_tag=C9F00_20590
NZ_PYKC01000132.1	Protein Homology	CDS	20805	22280	.	+	0	ID=cds-WP_031601980.1;Parent=gene-C9F00_RS20120;Dbxref=GenBank:WP_031601980.1;Name=WP_031601980.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9F00_RS20120;product=signal recognition particle-docking protein FtsY;protein_id=WP_031601980.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	22283	22951	.	+	.	ID=gene-C9F00_RS20125;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9F00_RS20125;old_locus_tag=C9F00_20595
NZ_PYKC01000132.1	Protein Homology	CDS	22283	22951	.	+	0	ID=cds-WP_000617729.1;Parent=gene-C9F00_RS20125;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9F00_RS20125;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	22944	23999	.	+	.	ID=gene-C9F00_RS20130;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9F00_RS20130;old_locus_tag=C9F00_20600
NZ_PYKC01000132.1	Protein Homology	CDS	22944	23999	.	+	0	ID=cds-WP_135492468.1;Parent=gene-C9F00_RS20130;Dbxref=GenBank:WP_135492468.1;Name=WP_135492468.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9F00_RS20130;product=permease-like cell division protein FtsX;protein_id=WP_135492468.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	24245	25099	.	+	.	ID=gene-C9F00_RS20135;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9F00_RS20135;old_locus_tag=C9F00_20605
NZ_PYKC01000132.1	Protein Homology	CDS	24245	25099	.	+	0	ID=cds-WP_000159621.1;Parent=gene-C9F00_RS20135;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9F00_RS20135;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	25421	26524	.	+	.	ID=gene-C9F00_RS20140;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9F00_RS20140;old_locus_tag=C9F00_20610
NZ_PYKC01000132.1	Protein Homology	CDS	25421	26524	.	+	0	ID=cds-WP_001528146.1;Parent=gene-C9F00_RS20140;Dbxref=GenBank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9F00_RS20140;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	26608	26742	.	-	.	ID=gene-C9F00_RS20145;Name=C9F00_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20145;old_locus_tag=C9F00_20615
NZ_PYKC01000132.1	Protein Homology	CDS	26608	26742	.	-	0	ID=cds-WP_001517957.1;Parent=gene-C9F00_RS20145;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9F00_RS20145;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	26720	27103	.	-	.	ID=gene-C9F00_RS20150;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9F00_RS20150;old_locus_tag=C9F00_20620
NZ_PYKC01000132.1	Protein Homology	CDS	26720	27103	.	-	0	ID=cds-WP_000778873.1;Parent=gene-C9F00_RS20150;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9F00_RS20150;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	27525	28634	.	+	.	ID=gene-C9F00_RS20155;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9F00_RS20155;old_locus_tag=C9F00_20625
NZ_PYKC01000132.1	Protein Homology	CDS	27525	28634	.	+	0	ID=cds-WP_000822976.1;Parent=gene-C9F00_RS20155;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9F00_RS20155;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	28694	29620	.	+	.	ID=gene-C9F00_RS20160;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9F00_RS20160;old_locus_tag=C9F00_20630
NZ_PYKC01000132.1	Protein Homology	CDS	28694	29620	.	+	0	ID=cds-WP_000003007.1;Parent=gene-C9F00_RS20160;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9F00_RS20160;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	29617	30894	.	+	.	ID=gene-C9F00_RS20165;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9F00_RS20165;old_locus_tag=C9F00_20635
NZ_PYKC01000132.1	Protein Homology	CDS	29617	30894	.	+	0	ID=cds-WP_000803764.1;Parent=gene-C9F00_RS20165;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9F00_RS20165;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	30891	31658	.	+	.	ID=gene-C9F00_RS20170;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9F00_RS20170;old_locus_tag=C9F00_20640
NZ_PYKC01000132.1	Protein Homology	CDS	30891	31658	.	+	0	ID=cds-WP_000082083.1;Parent=gene-C9F00_RS20170;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9F00_RS20170;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	31660	32373	.	+	.	ID=gene-C9F00_RS20175;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=C9F00_RS20175;old_locus_tag=C9F00_20645
NZ_PYKC01000132.1	Protein Homology	CDS	31660	32373	.	+	0	ID=cds-WP_000416114.1;Parent=gene-C9F00_RS20175;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9F00_RS20175;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	32537	32815	.	+	.	ID=gene-C9F00_RS20180;Name=C9F00_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20180;old_locus_tag=C9F00_20650
NZ_PYKC01000132.1	Protein Homology	CDS	32537	32815	.	+	0	ID=cds-WP_000621260.1;Parent=gene-C9F00_RS20180;Dbxref=GenBank:WP_000621260.1;Name=WP_000621260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=C9F00_RS20180;product=hypothetical protein;protein_id=WP_000621260.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	33048	34364	.	+	.	ID=gene-C9F00_RS20185;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9F00_RS20185;old_locus_tag=C9F00_20655
NZ_PYKC01000132.1	Protein Homology	CDS	33048	34364	.	+	0	ID=cds-WP_135492470.1;Parent=gene-C9F00_RS20185;Dbxref=GenBank:WP_135492470.1;Name=WP_135492470.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9F00_RS20185;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_135492470.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	34469	35356	.	+	.	ID=gene-C9F00_RS20190;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9F00_RS20190;old_locus_tag=C9F00_20660
NZ_PYKC01000132.1	Protein Homology	CDS	34469	35356	.	+	0	ID=cds-WP_135369723.1;Parent=gene-C9F00_RS20190;Dbxref=GenBank:WP_135369723.1;Name=WP_135369723.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F00_RS20190;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_135369723.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	35353	36198	.	+	.	ID=gene-C9F00_RS20195;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9F00_RS20195;old_locus_tag=C9F00_20665
NZ_PYKC01000132.1	Protein Homology	CDS	35353	36198	.	+	0	ID=cds-WP_000572196.1;Parent=gene-C9F00_RS20195;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9F00_RS20195;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	36200	37270	.	+	.	ID=gene-C9F00_RS20200;Name=C9F00_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20200;old_locus_tag=C9F00_20670
NZ_PYKC01000132.1	Protein Homology	CDS	36200	37270	.	+	0	ID=cds-WP_000907838.1;Parent=gene-C9F00_RS20200;Dbxref=GenBank:WP_000907838.1;Name=WP_000907838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9F00_RS20200;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907838.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	37267	38007	.	+	.	ID=gene-C9F00_RS20205;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9F00_RS20205;old_locus_tag=C9F00_20675
NZ_PYKC01000132.1	Protein Homology	CDS	37267	38007	.	+	0	ID=cds-WP_000073542.1;Parent=gene-C9F00_RS20205;Dbxref=GenBank:WP_000073542.1;Name=WP_000073542.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9F00_RS20205;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073542.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	38020	38436	.	-	.	ID=gene-C9F00_RS20210;Name=C9F00_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20210;old_locus_tag=C9F00_20680
NZ_PYKC01000132.1	Protein Homology	CDS	38020	38436	.	-	0	ID=cds-WP_000826042.1;Parent=gene-C9F00_RS20210;Dbxref=GenBank:WP_000826042.1;Name=WP_000826042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9F00_RS20210;product=DUF2756 family protein;protein_id=WP_000826042.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	38562	40304	.	+	.	ID=gene-C9F00_RS20215;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F00_RS20215;old_locus_tag=C9F00_20685
NZ_PYKC01000132.1	Protein Homology	CDS	38562	40304	.	+	0	ID=cds-WP_135369724.1;Parent=gene-C9F00_RS20215;Dbxref=GenBank:WP_135369724.1;Name=WP_135369724.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9F00_RS20215;product=gamma-glutamyltransferase;protein_id=WP_135369724.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	40349	41383	.	-	.	ID=gene-C9F00_RS20220;Name=C9F00_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20220;old_locus_tag=C9F00_20690
NZ_PYKC01000132.1	Protein Homology	CDS	40349	41383	.	-	0	ID=cds-WP_079827709.1;Parent=gene-C9F00_RS20220;Dbxref=GenBank:WP_079827709.1;Name=WP_079827709.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9F00_RS20220;product=phosphotriesterase family protein;protein_id=WP_079827709.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	41380	42351	.	-	.	ID=gene-C9F00_RS20225;Name=C9F00_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20225;old_locus_tag=C9F00_20695
NZ_PYKC01000132.1	Protein Homology	CDS	41380	42351	.	-	0	ID=cds-WP_135492472.1;Parent=gene-C9F00_RS20225;Dbxref=GenBank:WP_135492472.1;Name=WP_135492472.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9F00_RS20225;product=DMT family transporter;protein_id=WP_135492472.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	42405	43166	.	-	.	ID=gene-C9F00_RS20230;Name=C9F00_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20230;old_locus_tag=C9F00_20700
NZ_PYKC01000132.1	Protein Homology	CDS	42405	43166	.	-	0	ID=cds-WP_001066509.1;Parent=gene-C9F00_RS20230;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9F00_RS20230;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	43182	44396	.	-	.	ID=gene-C9F00_RS20235;Name=C9F00_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20235;old_locus_tag=C9F00_20705
NZ_PYKC01000132.1	Protein Homology	CDS	43182	44396	.	-	0	ID=cds-WP_000667440.1;Parent=gene-C9F00_RS20235;Dbxref=GenBank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9F00_RS20235;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	44661	45149	.	-	.	ID=gene-C9F00_RS20240;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9F00_RS20240;old_locus_tag=C9F00_20710
NZ_PYKC01000132.1	Protein Homology	CDS	44661	45149	.	-	0	ID=cds-WP_001290279.1;Parent=gene-C9F00_RS20240;Dbxref=GenBank:WP_001290279.1;Name=WP_001290279.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9F00_RS20240;product=N-acetyltransferase;protein_id=WP_001290279.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	45621	46658	.	+	.	ID=gene-C9F00_RS20245;Name=C9F00_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20245;old_locus_tag=C9F00_20715
NZ_PYKC01000132.1	Protein Homology	CDS	45621	46658	.	+	0	ID=cds-WP_047605573.1;Parent=gene-C9F00_RS20245;Dbxref=GenBank:WP_047605573.1;Name=WP_047605573.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9F00_RS20245;product=oxidoreductase;protein_id=WP_047605573.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	46782	47477	.	+	.	ID=gene-C9F00_RS20250;Name=C9F00_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20250;old_locus_tag=C9F00_20720
NZ_PYKC01000132.1	Protein Homology	CDS	46782	47477	.	+	0	ID=cds-WP_000639789.1;Parent=gene-C9F00_RS20250;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9F00_RS20250;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	47702	48697	.	+	.	ID=gene-C9F00_RS20255;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9F00_RS20255;old_locus_tag=C9F00_20725
NZ_PYKC01000132.1	Protein Homology	CDS	47702	48697	.	+	0	ID=cds-WP_000730239.1;Parent=gene-C9F00_RS20255;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9F00_RS20255;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	48836	49369	.	+	.	ID=gene-C9F00_RS20260;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9F00_RS20260;old_locus_tag=C9F00_20730
NZ_PYKC01000132.1	Protein Homology	CDS	48836	49369	.	+	0	ID=cds-WP_000108342.1;Parent=gene-C9F00_RS20260;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9F00_RS20260;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	49366	50706	.	+	.	ID=gene-C9F00_RS20265;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9F00_RS20265;old_locus_tag=C9F00_20735
NZ_PYKC01000132.1	Protein Homology	CDS	49366	50706	.	+	0	ID=cds-WP_000105950.1;Parent=gene-C9F00_RS20265;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9F00_RS20265;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	pseudogene	50629	51002	.	-	.	ID=gene-C9F00_RS20270;Name=C9F00_RS20270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS20270;old_locus_tag=C9F00_20740;partial=true;pseudo=true;start_range=.,50629
NZ_PYKC01000132.1	Protein Homology	CDS	50629	51002	.	-	0	ID=cds-C9F00_RS20270;Parent=gene-C9F00_RS20270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9F00_RS20270;partial=true;product=MarC family protein;pseudo=true;start_range=.,50629;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	51129	52235	.	+	.	ID=gene-C9F00_RS20275;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F00_RS20275;old_locus_tag=C9F00_20745
NZ_PYKC01000132.1	Protein Homology	CDS	51129	52235	.	+	0	ID=cds-WP_000799940.1;Parent=gene-C9F00_RS20275;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9F00_RS20275;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	52582	54768	.	+	.	ID=gene-C9F00_RS20280;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9F00_RS20280;old_locus_tag=C9F00_20750
NZ_PYKC01000132.1	Protein Homology	CDS	52582	54768	.	+	0	ID=cds-WP_020899336.1;Parent=gene-C9F00_RS20280;Dbxref=GenBank:WP_020899336.1;Name=WP_020899336.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9F00_RS20280;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_020899336.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	54765	56741	.	+	.	ID=gene-C9F00_RS20285;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9F00_RS20285;old_locus_tag=C9F00_20755
NZ_PYKC01000132.1	Protein Homology	CDS	54765	56741	.	+	0	ID=cds-WP_064047126.1;Parent=gene-C9F00_RS20285;Dbxref=GenBank:WP_064047126.1;Name=WP_064047126.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F00_RS20285;product=glycogen debranching protein GlgX;protein_id=WP_064047126.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	56756	58051	.	+	.	ID=gene-C9F00_RS20290;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9F00_RS20290;old_locus_tag=C9F00_20760
NZ_PYKC01000132.1	Protein Homology	CDS	56756	58051	.	+	0	ID=cds-WP_000253994.1;Parent=gene-C9F00_RS20290;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9F00_RS20290;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	58051	59484	.	+	.	ID=gene-C9F00_RS20295;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9F00_RS20295;old_locus_tag=C9F00_20765
NZ_PYKC01000132.1	Protein Homology	CDS	58051	59484	.	+	0	ID=cds-WP_001197669.1;Parent=gene-C9F00_RS20295;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9F00_RS20295;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	59504	61951	.	+	.	ID=gene-C9F00_RS20300;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9F00_RS20300;old_locus_tag=C9F00_20770
NZ_PYKC01000132.1	Protein Homology	CDS	59504	61951	.	+	0	ID=cds-WP_000993424.1;Parent=gene-C9F00_RS20300;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9F00_RS20300;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	62129	62884	.	+	.	ID=gene-C9F00_RS20305;Name=C9F00_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20305;old_locus_tag=C9F00_20775
NZ_PYKC01000132.1	Protein Homology	CDS	62129	62884	.	+	0	ID=cds-WP_000724553.1;Parent=gene-C9F00_RS20305;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=C9F00_RS20305;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	62928	63833	.	-	.	ID=gene-C9F00_RS20310;Name=C9F00_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20310;old_locus_tag=C9F00_20780
NZ_PYKC01000132.1	Protein Homology	CDS	62928	63833	.	-	0	ID=cds-WP_000192193.1;Parent=gene-C9F00_RS20310;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=C9F00_RS20310;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	63877	65592	.	-	.	ID=gene-C9F00_RS20315;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9F00_RS20315;old_locus_tag=C9F00_20785
NZ_PYKC01000132.1	Protein Homology	CDS	63877	65592	.	-	0	ID=cds-WP_000078497.1;Parent=gene-C9F00_RS20315;Dbxref=GenBank:WP_000078497.1;Name=WP_000078497.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9F00_RS20315;product=dihydroxy-acid dehydratase;protein_id=WP_000078497.1;transl_table=11
NZ_PYKC01000132.1	RefSeq	gene	65589	66160	.	-	.	ID=gene-C9F00_RS20320;Name=C9F00_RS20320;end_range=66160,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20320;old_locus_tag=C9F00_20790;partial=true
NZ_PYKC01000132.1	Protein Homology	CDS	65589	66160	.	-	2	ID=cds-WP_135492474.1;Parent=gene-C9F00_RS20320;Dbxref=GenBank:WP_135492474.1;Name=WP_135492474.1;Ontology_term=GO:0055085,GO:0022857;end_range=66160,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F00_RS20320;partial=true;product=MFS transporter;protein_id=WP_135492474.1;transl_table=11
##sequence-region NZ_PYKC01000087.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000087.1	RefSeq	region	1	2047	.	+	.	ID=NZ_PYKC01000087.1:1..2047;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000087.1	RefSeq	gene	1	199	.	-	.	ID=gene-C9F00_RS24205;Name=C9F00_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24205;old_locus_tag=C9F00_14520;partial=true;start_range=.,1
NZ_PYKC01000087.1	GeneMarkS-2+	CDS	1	199	.	-	0	ID=cds-WP_210114163.1;Parent=gene-C9F00_RS24205;Dbxref=GenBank:WP_210114163.1;Name=WP_210114163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24205;partial=true;product=hypothetical protein;protein_id=WP_210114163.1;start_range=.,1;transl_table=11
NZ_PYKC01000087.1	RefSeq	pseudogene	343	1050	.	+	.	ID=gene-C9F00_RS14185;Name=C9F00_RS14185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14185;old_locus_tag=C9F00_14525;partial=true;pseudo=true;start_range=.,343
NZ_PYKC01000087.1	Protein Homology	CDS	343	1050	.	+	0	ID=cds-C9F00_RS14185;Parent=gene-C9F00_RS14185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9F00_RS14185;partial=true;product=cytochrome c-type biogenesis CcmF C-terminal domain-containing protein;pseudo=true;start_range=.,343;transl_table=11
NZ_PYKC01000087.1	RefSeq	gene	1047	1604	.	+	.	ID=gene-C9F00_RS14190;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9F00_RS14190;old_locus_tag=C9F00_14530
NZ_PYKC01000087.1	Protein Homology	CDS	1047	1604	.	+	0	ID=cds-WP_023165929.1;Parent=gene-C9F00_RS14190;Dbxref=GenBank:WP_023165929.1;Name=WP_023165929.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9F00_RS14190;product=thiol:disulfide interchange protein DsbE;protein_id=WP_023165929.1;transl_table=11
NZ_PYKC01000087.1	RefSeq	pseudogene	1601	1960	.	+	.	ID=gene-C9F00_RS14195;Name=C9F00_RS14195;end_range=1960,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14195;old_locus_tag=C9F00_14535;partial=true;pseudo=true
NZ_PYKC01000087.1	Protein Homology	CDS	1601	1960	.	+	0	ID=cds-C9F00_RS14195;Parent=gene-C9F00_RS14195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0017004,GO:0046872;end_range=1960,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9F00_RS14195;partial=true;product=cytochrome c-type biogenesis protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000008.1 1 65003
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000008.1	RefSeq	region	1	65003	.	+	.	ID=NZ_PYKC01000008.1:1..65003;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000008.1	RefSeq	gene	199	1197	.	+	.	ID=gene-C9F00_RS01865;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=C9F00_RS01865;old_locus_tag=C9F00_01900
NZ_PYKC01000008.1	Protein Homology	CDS	199	1197	.	+	0	ID=cds-WP_021000516.1;Parent=gene-C9F00_RS01865;Dbxref=GenBank:WP_021000516.1;Name=WP_021000516.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9F00_RS01865;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_021000516.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	1331	2851	.	+	.	ID=gene-C9F00_RS01870;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=C9F00_RS01870;old_locus_tag=C9F00_01905
NZ_PYKC01000008.1	Protein Homology	CDS	1331	2851	.	+	0	ID=cds-WP_079943696.1;Parent=gene-C9F00_RS01870;Dbxref=GenBank:WP_079943696.1;Name=WP_079943696.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9F00_RS01870;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_079943696.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	2867	3877	.	+	.	ID=gene-C9F00_RS01875;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9F00_RS01875;old_locus_tag=C9F00_01910
NZ_PYKC01000008.1	Protein Homology	CDS	2867	3877	.	+	0	ID=cds-WP_001275101.1;Parent=gene-C9F00_RS01875;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F00_RS01875;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	3952	5187	.	-	.	ID=gene-C9F00_RS01880;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9F00_RS01880;old_locus_tag=C9F00_01915
NZ_PYKC01000008.1	Protein Homology	CDS	3952	5187	.	-	0	ID=cds-WP_080193537.1;Parent=gene-C9F00_RS01880;Dbxref=GenBank:WP_080193537.1;Name=WP_080193537.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F00_RS01880;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_080193537.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	5181	6422	.	-	.	ID=gene-C9F00_RS01885;Name=C9F00_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01885;old_locus_tag=C9F00_01920
NZ_PYKC01000008.1	Protein Homology	CDS	5181	6422	.	-	0	ID=cds-WP_001660461.1;Parent=gene-C9F00_RS01885;Dbxref=GenBank:WP_001660461.1;Name=WP_001660461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9F00_RS01885;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001660461.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	6627	6872	.	-	.	ID=gene-C9F00_RS01890;Name=C9F00_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01890;old_locus_tag=C9F00_01925
NZ_PYKC01000008.1	Protein Homology	CDS	6627	6872	.	-	0	ID=cds-WP_000605187.1;Parent=gene-C9F00_RS01890;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9F00_RS01890;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	6869	7588	.	-	.	ID=gene-C9F00_RS01895;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9F00_RS01895;old_locus_tag=C9F00_01930
NZ_PYKC01000008.1	Protein Homology	CDS	6869	7588	.	-	0	ID=cds-WP_000920081.1;Parent=gene-C9F00_RS01895;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9F00_RS01895;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	7765	8649	.	-	.	ID=gene-C9F00_RS01900;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9F00_RS01900;old_locus_tag=C9F00_01935
NZ_PYKC01000008.1	Protein Homology	CDS	7765	8649	.	-	0	ID=cds-WP_000553526.1;Parent=gene-C9F00_RS01900;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9F00_RS01900;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	8803	9498	.	-	.	ID=gene-C9F00_RS01905;Name=C9F00_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01905;old_locus_tag=C9F00_01940
NZ_PYKC01000008.1	Protein Homology	CDS	8803	9498	.	-	0	ID=cds-WP_000989296.1;Parent=gene-C9F00_RS01905;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9F00_RS01905;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	9495	9893	.	-	.	ID=gene-C9F00_RS01910;Name=C9F00_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01910;old_locus_tag=C9F00_01945
NZ_PYKC01000008.1	Protein Homology	CDS	9495	9893	.	-	0	ID=cds-WP_000045719.1;Parent=gene-C9F00_RS01910;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9F00_RS01910;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	10025	10933	.	-	.	ID=gene-C9F00_RS01915;Name=C9F00_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01915;old_locus_tag=C9F00_01950
NZ_PYKC01000008.1	Protein Homology	CDS	10025	10933	.	-	0	ID=cds-WP_000024658.1;Parent=gene-C9F00_RS01915;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9F00_RS01915;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	11059	12417	.	+	.	ID=gene-C9F00_RS01920;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=C9F00_RS01920;old_locus_tag=C9F00_01955
NZ_PYKC01000008.1	Protein Homology	CDS	11059	12417	.	+	0	ID=cds-WP_000194218.1;Parent=gene-C9F00_RS01920;Dbxref=GenBank:WP_000194218.1;Name=WP_000194218.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9F00_RS01920;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194218.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	12429	13466	.	+	.	ID=gene-C9F00_RS01925;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9F00_RS01925;old_locus_tag=C9F00_01960
NZ_PYKC01000008.1	Protein Homology	CDS	12429	13466	.	+	0	ID=cds-WP_001289857.1;Parent=gene-C9F00_RS01925;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9F00_RS01925;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	13482	14183	.	+	.	ID=gene-C9F00_RS01930;Name=C9F00_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01930;old_locus_tag=C9F00_01965
NZ_PYKC01000008.1	Protein Homology	CDS	13482	14183	.	+	0	ID=cds-WP_000170620.1;Parent=gene-C9F00_RS01930;Dbxref=GenBank:WP_000170620.1;Name=WP_000170620.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9F00_RS01930;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170620.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	14192	14836	.	+	.	ID=gene-C9F00_RS01935;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9F00_RS01935;old_locus_tag=C9F00_01970
NZ_PYKC01000008.1	Protein Homology	CDS	14192	14836	.	+	0	ID=cds-WP_000781195.1;Parent=gene-C9F00_RS01935;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9F00_RS01935;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	14851	16044	.	+	.	ID=gene-C9F00_RS01940;Name=C9F00_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01940;old_locus_tag=C9F00_01975
NZ_PYKC01000008.1	Protein Homology	CDS	14851	16044	.	+	0	ID=cds-WP_135369080.1;Parent=gene-C9F00_RS01940;Dbxref=GenBank:WP_135369080.1;Name=WP_135369080.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9F00_RS01940;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_135369080.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	16153	17091	.	+	.	ID=gene-C9F00_RS01945;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=C9F00_RS01945;old_locus_tag=C9F00_01980
NZ_PYKC01000008.1	Protein Homology	CDS	16153	17091	.	+	0	ID=cds-WP_039590605.1;Parent=gene-C9F00_RS01945;Dbxref=GenBank:WP_039590605.1;Name=WP_039590605.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9F00_RS01945;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_039590605.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	17149	17232	.	-	.	ID=gene-C9F00_RS24695;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=C9F00_RS24695;old_locus_tag=C9F00_01985
NZ_PYKC01000008.1	Protein Homology	CDS	17149	17232	.	-	0	ID=cds-WP_000698460.1;Parent=gene-C9F00_RS24695;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=C9F00_RS24695;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	17550	18986	.	+	.	ID=gene-C9F00_RS01955;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9F00_RS01955;old_locus_tag=C9F00_01990
NZ_PYKC01000008.1	Protein Homology	CDS	17550	18986	.	+	0	ID=cds-WP_135369617.1;Parent=gene-C9F00_RS01955;Dbxref=GenBank:WP_135369617.1;Name=WP_135369617.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9F00_RS01955;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_135369617.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	19052	19813	.	+	.	ID=gene-C9F00_RS01960;Name=C9F00_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01960;old_locus_tag=C9F00_01995
NZ_PYKC01000008.1	Protein Homology	CDS	19052	19813	.	+	0	ID=cds-WP_000169608.1;Parent=gene-C9F00_RS01960;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9F00_RS01960;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	19861	20430	.	-	.	ID=gene-C9F00_RS01965;Name=C9F00_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01965;old_locus_tag=C9F00_02000
NZ_PYKC01000008.1	Protein Homology	CDS	19861	20430	.	-	0	ID=cds-WP_001523476.1;Parent=gene-C9F00_RS01965;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9F00_RS01965;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	20589	21176	.	+	.	ID=gene-C9F00_RS01970;Name=C9F00_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01970;old_locus_tag=C9F00_02005
NZ_PYKC01000008.1	Protein Homology	CDS	20589	21176	.	+	0	ID=cds-WP_135492099.1;Parent=gene-C9F00_RS01970;Dbxref=GenBank:WP_135492099.1;Name=WP_135492099.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9F00_RS01970;product=Yip1 family protein;protein_id=WP_135492099.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	21342	22289	.	+	.	ID=gene-C9F00_RS01975;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9F00_RS01975;old_locus_tag=C9F00_02015
NZ_PYKC01000008.1	Protein Homology	CDS	21342	22289	.	+	0	ID=cds-WP_000911555.1;Parent=gene-C9F00_RS01975;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9F00_RS01975;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	22348	24078	.	-	.	ID=gene-C9F00_RS01980;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9F00_RS01980;old_locus_tag=C9F00_02020
NZ_PYKC01000008.1	Protein Homology	CDS	22348	24078	.	-	0	ID=cds-WP_135369618.1;Parent=gene-C9F00_RS01980;Dbxref=GenBank:WP_135369618.1;Name=WP_135369618.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9F00_RS01980;product=D-lactate dehydrogenase;protein_id=WP_135369618.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	24345	26642	.	+	.	ID=gene-C9F00_RS01985;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9F00_RS01985;old_locus_tag=C9F00_02025
NZ_PYKC01000008.1	Protein Homology	CDS	24345	26642	.	+	0	ID=cds-WP_000871555.1;Parent=gene-C9F00_RS01985;Dbxref=GenBank:WP_000871555.1;Name=WP_000871555.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9F00_RS01985;product=beta-glucosidase BglX;protein_id=WP_000871555.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	26823	27740	.	+	.	ID=gene-C9F00_RS01990;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=C9F00_RS01990;old_locus_tag=C9F00_02030
NZ_PYKC01000008.1	Protein Homology	CDS	26823	27740	.	+	0	ID=cds-WP_000155876.1;Parent=gene-C9F00_RS01990;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9F00_RS01990;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	27744	28913	.	+	.	ID=gene-C9F00_RS01995;Name=C9F00_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01995;old_locus_tag=C9F00_02035
NZ_PYKC01000008.1	Protein Homology	CDS	27744	28913	.	+	0	ID=cds-WP_135369619.1;Parent=gene-C9F00_RS01995;Dbxref=GenBank:WP_135369619.1;Name=WP_135369619.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9F00_RS01995;product=ABC transporter permease;protein_id=WP_135369619.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	28906	29853	.	+	.	ID=gene-C9F00_RS02000;Name=C9F00_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02000;old_locus_tag=C9F00_02040
NZ_PYKC01000008.1	Protein Homology	CDS	28906	29853	.	+	0	ID=cds-WP_000569166.1;Parent=gene-C9F00_RS02000;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9F00_RS02000;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	29837	30568	.	+	.	ID=gene-C9F00_RS02005;Name=C9F00_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02005;old_locus_tag=C9F00_02045
NZ_PYKC01000008.1	Protein Homology	CDS	29837	30568	.	+	0	ID=cds-WP_000824854.1;Parent=gene-C9F00_RS02005;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9F00_RS02005;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	30549	30656	.	-	.	ID=gene-C9F00_RS02010;Name=C9F00_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02010;old_locus_tag=C9F00_02050
NZ_PYKC01000008.1	Protein Homology	CDS	30549	30656	.	-	0	ID=cds-WP_001261696.1;Parent=gene-C9F00_RS02010;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9F00_RS02010;product=protein YohO;protein_id=WP_001261696.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	30716	31447	.	-	.	ID=gene-C9F00_RS02015;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9F00_RS02015;old_locus_tag=C9F00_02055
NZ_PYKC01000008.1	Protein Homology	CDS	30716	31447	.	-	0	ID=cds-WP_001240418.1;Parent=gene-C9F00_RS02015;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9F00_RS02015;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	31670	33355	.	+	.	ID=gene-C9F00_RS02020;Name=C9F00_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02020;old_locus_tag=C9F00_02060
NZ_PYKC01000008.1	Protein Homology	CDS	31670	33355	.	+	0	ID=cds-WP_000272850.1;Parent=gene-C9F00_RS02020;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9F00_RS02020;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	33352	34071	.	+	.	ID=gene-C9F00_RS02025;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9F00_RS02025;old_locus_tag=C9F00_02065
NZ_PYKC01000008.1	Protein Homology	CDS	33352	34071	.	+	0	ID=cds-WP_000598637.1;Parent=gene-C9F00_RS02025;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9F00_RS02025;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	34118	34585	.	+	.	ID=gene-C9F00_RS02030;Name=C9F00_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02030;old_locus_tag=C9F00_02070
NZ_PYKC01000008.1	Protein Homology	CDS	34118	34585	.	+	0	ID=cds-WP_000950413.1;Parent=gene-C9F00_RS02030;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9F00_RS02030;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	34642	35172	.	-	.	ID=gene-C9F00_RS02035;Name=C9F00_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02035;old_locus_tag=C9F00_02075
NZ_PYKC01000008.1	Protein Homology	CDS	34642	35172	.	-	0	ID=cds-WP_135369620.1;Parent=gene-C9F00_RS02035;Dbxref=GenBank:WP_135369620.1;Name=WP_135369620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9F00_RS02035;product=YehR family lipoprotein;protein_id=WP_135369620.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	35344	35802	.	-	.	ID=gene-C9F00_RS02040;Name=C9F00_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02040;old_locus_tag=C9F00_02080
NZ_PYKC01000008.1	Protein Homology	CDS	35344	35802	.	-	0	ID=cds-WP_000703137.1;Parent=gene-C9F00_RS02040;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9F00_RS02040;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	36043	38076	.	-	.	ID=gene-C9F00_RS02045;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F00_RS02045;old_locus_tag=C9F00_02085
NZ_PYKC01000008.1	Protein Homology	CDS	36043	38076	.	-	0	ID=cds-WP_000195330.1;Parent=gene-C9F00_RS02045;Dbxref=GenBank:WP_000195330.1;Name=WP_000195330.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9F00_RS02045;product=methionine--tRNA ligase;protein_id=WP_000195330.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	38241	39350	.	+	.	ID=gene-C9F00_RS02050;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9F00_RS02050;old_locus_tag=C9F00_02090
NZ_PYKC01000008.1	Protein Homology	CDS	38241	39350	.	+	0	ID=cds-WP_001005424.1;Parent=gene-C9F00_RS02050;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9F00_RS02050;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	39628	39909	.	+	.	ID=gene-C9F00_RS02055;Name=C9F00_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02055;old_locus_tag=C9F00_02095
NZ_PYKC01000008.1	Protein Homology	CDS	39628	39909	.	+	0	ID=cds-WP_135369621.1;Parent=gene-C9F00_RS02055;Dbxref=GenBank:WP_135369621.1;Name=WP_135369621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=C9F00_RS02055;product=DUF2574 family protein;protein_id=WP_135369621.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	40188	40721	.	+	.	ID=gene-C9F00_RS02060;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=C9F00_RS02060;old_locus_tag=C9F00_02100
NZ_PYKC01000008.1	Protein Homology	CDS	40188	40721	.	+	0	ID=cds-WP_000830690.1;Parent=gene-C9F00_RS02060;Dbxref=GenBank:WP_000830690.1;Name=WP_000830690.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=C9F00_RS02060;product=fimbrial protein YehD;protein_id=WP_000830690.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	40783	41463	.	+	.	ID=gene-C9F00_RS02065;Name=C9F00_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02065;old_locus_tag=C9F00_02105
NZ_PYKC01000008.1	Protein Homology	CDS	40783	41463	.	+	0	ID=cds-WP_000871808.1;Parent=gene-C9F00_RS02065;Dbxref=GenBank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=C9F00_RS02065;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	41492	43978	.	+	.	ID=gene-C9F00_RS02070;Name=C9F00_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02070;old_locus_tag=C9F00_02110
NZ_PYKC01000008.1	Protein Homology	CDS	41492	43978	.	+	0	ID=cds-WP_023244531.1;Parent=gene-C9F00_RS02070;Dbxref=GenBank:WP_023244531.1;Name=WP_023244531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=C9F00_RS02070;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023244531.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	43994	45016	.	+	.	ID=gene-C9F00_RS02075;Name=C9F00_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02075;old_locus_tag=C9F00_02115
NZ_PYKC01000008.1	Protein Homology	CDS	43994	45016	.	+	0	ID=cds-WP_050067733.1;Parent=gene-C9F00_RS02075;Dbxref=GenBank:WP_050067733.1;Name=WP_050067733.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=C9F00_RS02075;product=fimbrial protein;protein_id=WP_050067733.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	45060	45374	.	-	.	ID=gene-C9F00_RS02080;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9F00_RS02080;old_locus_tag=C9F00_02120
NZ_PYKC01000008.1	Protein Homology	CDS	45060	45374	.	-	0	ID=cds-WP_000837534.1;Parent=gene-C9F00_RS02080;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9F00_RS02080;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11
NZ_PYKC01000008.1	cmsearch	riboswitch	45656	45752	.	+	.	ID=id-NZ_PYKC01000008.1:45656..45752;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000008.1	RefSeq	gene	45784	46581	.	+	.	ID=gene-C9F00_RS02085;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9F00_RS02085;old_locus_tag=C9F00_02125
NZ_PYKC01000008.1	Protein Homology	CDS	45784	46581	.	+	0	ID=cds-WP_135369622.1;Parent=gene-C9F00_RS02085;Dbxref=GenBank:WP_135369622.1;Name=WP_135369622.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9F00_RS02085;product=hydroxyethylthiazole kinase;protein_id=WP_135369622.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	46568	47368	.	+	.	ID=gene-C9F00_RS02090;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9F00_RS02090;old_locus_tag=C9F00_02130
NZ_PYKC01000008.1	Protein Homology	CDS	46568	47368	.	+	0	ID=cds-WP_063809097.1;Parent=gene-C9F00_RS02090;Dbxref=GenBank:WP_063809097.1;Name=WP_063809097.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9F00_RS02090;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_063809097.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	47404	48150	.	+	.	ID=gene-C9F00_RS02095;Name=C9F00_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02095;old_locus_tag=C9F00_02135
NZ_PYKC01000008.1	Protein Homology	CDS	47404	48150	.	+	0	ID=cds-WP_135369623.1;Parent=gene-C9F00_RS02095;Dbxref=GenBank:WP_135369623.1;Name=WP_135369623.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9F00_RS02095;product=GntR family transcriptional regulator;protein_id=WP_135369623.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	48124	49089	.	-	.	ID=gene-C9F00_RS02100;Name=C9F00_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02100;old_locus_tag=C9F00_02140
NZ_PYKC01000008.1	Protein Homology	CDS	48124	49089	.	-	0	ID=cds-WP_050067730.1;Parent=gene-C9F00_RS02100;Dbxref=GenBank:WP_050067730.1;Name=WP_050067730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9F00_RS02100;product=PfkB family carbohydrate kinase;protein_id=WP_050067730.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	49086	50090	.	-	.	ID=gene-C9F00_RS02105;Name=C9F00_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02105;old_locus_tag=C9F00_02145
NZ_PYKC01000008.1	Protein Homology	CDS	49086	50090	.	-	0	ID=cds-WP_000642793.1;Parent=gene-C9F00_RS02105;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9F00_RS02105;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	50087	51358	.	-	.	ID=gene-C9F00_RS02110;Name=C9F00_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02110;old_locus_tag=C9F00_02150
NZ_PYKC01000008.1	Protein Homology	CDS	50087	51358	.	-	0	ID=cds-WP_135369624.1;Parent=gene-C9F00_RS02110;Dbxref=GenBank:WP_135369624.1;Name=WP_135369624.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9F00_RS02110;product=nucleoside permease;protein_id=WP_135369624.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	51612	52664	.	+	.	ID=gene-C9F00_RS02115;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9F00_RS02115;old_locus_tag=C9F00_02155
NZ_PYKC01000008.1	Protein Homology	CDS	51612	52664	.	+	0	ID=cds-WP_000129590.1;Parent=gene-C9F00_RS02115;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9F00_RS02115;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	52717	53616	.	-	.	ID=gene-C9F00_RS02120;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9F00_RS02120;old_locus_tag=C9F00_02160
NZ_PYKC01000008.1	Protein Homology	CDS	52717	53616	.	-	0	ID=cds-WP_135369625.1;Parent=gene-C9F00_RS02120;Dbxref=GenBank:WP_135369625.1;Name=WP_135369625.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9F00_RS02120;product=lipid kinase YegS;protein_id=WP_135369625.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	54181	54516	.	+	.	ID=gene-C9F00_RS02125;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9F00_RS02125;old_locus_tag=C9F00_02165
NZ_PYKC01000008.1	Protein Homology	CDS	54181	54516	.	+	0	ID=cds-WP_001581073.1;Parent=gene-C9F00_RS02125;Dbxref=GenBank:WP_001581073.1;Name=WP_001581073.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9F00_RS02125;product=type III secretion system effector SteD;protein_id=WP_001581073.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	54638	55054	.	+	.	ID=gene-C9F00_RS02130;Name=C9F00_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02130;old_locus_tag=C9F00_02170
NZ_PYKC01000008.1	Protein Homology	CDS	54638	55054	.	+	0	ID=cds-WP_001555792.1;Parent=gene-C9F00_RS02130;Dbxref=GenBank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9F00_RS02130;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	55090	56136	.	-	.	ID=gene-C9F00_RS02135;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9F00_RS02135;old_locus_tag=C9F00_02175
NZ_PYKC01000008.1	Protein Homology	CDS	55090	56136	.	-	0	ID=cds-WP_135369626.1;Parent=gene-C9F00_RS02135;Dbxref=GenBank:WP_135369626.1;Name=WP_135369626.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9F00_RS02135;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_135369626.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	56588	57949	.	-	.	ID=gene-C9F00_RS02140;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=C9F00_RS02140;old_locus_tag=C9F00_02180
NZ_PYKC01000008.1	Protein Homology	CDS	56588	57949	.	-	0	ID=cds-WP_001517981.1;Parent=gene-C9F00_RS02140;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9F00_RS02140;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	58113	58730	.	+	.	ID=gene-C9F00_RS02145;Name=C9F00_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02145;old_locus_tag=C9F00_02185
NZ_PYKC01000008.1	Protein Homology	CDS	58113	58730	.	+	0	ID=cds-WP_135369627.1;Parent=gene-C9F00_RS02145;Dbxref=GenBank:WP_135369627.1;Name=WP_135369627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=C9F00_RS02145;product=hypothetical protein;protein_id=WP_135369627.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	pseudogene	58755	58951	.	+	.	ID=gene-C9F00_RS24700;Name=C9F00_RS24700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24700;old_locus_tag=C9F00_02190;pseudo=true
NZ_PYKC01000008.1	Protein Homology	CDS	58755	58951	.	+	0	ID=cds-C9F00_RS24700;Parent=gene-C9F00_RS24700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497696.1;locus_tag=C9F00_RS24700;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	59385	59804	.	+	.	ID=gene-C9F00_RS02155;Name=C9F00_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02155;old_locus_tag=C9F00_02195
NZ_PYKC01000008.1	Protein Homology	CDS	59385	59804	.	+	0	ID=cds-WP_000502181.1;Parent=gene-C9F00_RS02155;Dbxref=GenBank:WP_000502181.1;Name=WP_000502181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=C9F00_RS02155;product=hypothetical protein;protein_id=WP_000502181.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	60351	60794	.	+	.	ID=gene-C9F00_RS02160;Name=C9F00_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02160;old_locus_tag=C9F00_02200
NZ_PYKC01000008.1	Protein Homology	CDS	60351	60794	.	+	0	ID=cds-WP_000646715.1;Parent=gene-C9F00_RS02160;Dbxref=GenBank:WP_000646715.1;Name=WP_000646715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=C9F00_RS02160;product=hypothetical protein;protein_id=WP_000646715.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	pseudogene	61185	61482	.	+	.	ID=gene-C9F00_RS02165;Name=C9F00_RS02165;end_range=61482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02165;old_locus_tag=C9F00_02205;partial=true;pseudo=true;start_range=.,61185
NZ_PYKC01000008.1	Protein Homology	CDS	61185	61482	.	+	0	ID=cds-C9F00_RS02165;Parent=gene-C9F00_RS02165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=61482,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=C9F00_RS02165;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,61185;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	61607	61930	.	+	.	ID=gene-C9F00_RS02170;Name=C9F00_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02170;old_locus_tag=C9F00_02210
NZ_PYKC01000008.1	GeneMarkS-2+	CDS	61607	61930	.	+	0	ID=cds-WP_021294500.1;Parent=gene-C9F00_RS02170;Dbxref=GenBank:WP_021294500.1;Name=WP_021294500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS02170;product=hypothetical protein;protein_id=WP_021294500.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	pseudogene	61978	62181	.	+	.	ID=gene-C9F00_RS24175;Name=C9F00_RS24175;end_range=62181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24175;partial=true;pseudo=true;start_range=.,61978
NZ_PYKC01000008.1	Protein Homology	CDS	61978	62181	.	+	0	ID=cds-C9F00_RS24175;Parent=gene-C9F00_RS24175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=62181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=C9F00_RS24175;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,61978;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	62334	62702	.	+	.	ID=gene-C9F00_RS24180;Name=C9F00_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24180
NZ_PYKC01000008.1	GeneMarkS-2+	CDS	62334	62702	.	+	0	ID=cds-WP_186799036.1;Parent=gene-C9F00_RS24180;Dbxref=GenBank:WP_186799036.1;Name=WP_186799036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24180;product=hypothetical protein;protein_id=WP_186799036.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	62780	63160	.	+	.	ID=gene-C9F00_RS02180;Name=C9F00_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02180;old_locus_tag=C9F00_02220
NZ_PYKC01000008.1	Protein Homology	CDS	62780	63160	.	+	0	ID=cds-WP_023235690.1;Parent=gene-C9F00_RS02180;Dbxref=GenBank:WP_023235690.1;Name=WP_023235690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727381.1;locus_tag=C9F00_RS02180;product=hypothetical protein;protein_id=WP_023235690.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	63245	63508	.	+	.	ID=gene-C9F00_RS02185;Name=C9F00_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02185;old_locus_tag=C9F00_02225
NZ_PYKC01000008.1	GeneMarkS-2+	CDS	63245	63508	.	+	0	ID=cds-WP_186799034.1;Parent=gene-C9F00_RS02185;Dbxref=GenBank:WP_186799034.1;Name=WP_186799034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS02185;product=hypothetical protein;protein_id=WP_186799034.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	pseudogene	63572	63799	.	+	.	ID=gene-C9F00_RS02190;Name=C9F00_RS02190;end_range=63799,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02190;old_locus_tag=C9F00_02230;partial=true;pseudo=true
NZ_PYKC01000008.1	Protein Homology	CDS	63572	63799	.	+	0	ID=cds-C9F00_RS02190;Parent=gene-C9F00_RS02190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=63799,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=C9F00_RS02190;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	63750	63953	.	+	.	ID=gene-C9F00_RS24765;Name=C9F00_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24765
NZ_PYKC01000008.1	Protein Homology	CDS	63750	63953	.	+	0	ID=cds-WP_135369147.1;Parent=gene-C9F00_RS24765;Dbxref=GenBank:WP_135369147.1;Name=WP_135369147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026944.6;locus_tag=C9F00_RS24765;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_135369147.1;transl_table=11
NZ_PYKC01000008.1	RefSeq	gene	64015	64881	.	+	.	ID=gene-C9F00_RS02200;Name=C9F00_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02200;old_locus_tag=C9F00_02235
NZ_PYKC01000008.1	Protein Homology	CDS	64015	64881	.	+	0	ID=cds-WP_063809102.1;Parent=gene-C9F00_RS02200;Dbxref=GenBank:WP_063809102.1;Name=WP_063809102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864146.1;locus_tag=C9F00_RS02200;product=HEAT repeat domain-containing protein;protein_id=WP_063809102.1;transl_table=11
##sequence-region NZ_PYKC01000114.1 1 63967
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000114.1	RefSeq	region	1	63967	.	+	.	ID=NZ_PYKC01000114.1:1..63967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000114.1	RefSeq	pseudogene	46	1377	.	+	.	ID=gene-C9F00_RS17760;Name=C9F00_RS17760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17760;old_locus_tag=C9F00_18205;partial=true;pseudo=true;start_range=.,46
NZ_PYKC01000114.1	Protein Homology	CDS	46	1377	.	+	0	ID=cds-C9F00_RS17760;Parent=gene-C9F00_RS17760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F00_RS17760;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,46;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	1482	2609	.	-	.	ID=gene-C9F00_RS17765;Name=C9F00_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17765;old_locus_tag=C9F00_18210
NZ_PYKC01000114.1	Protein Homology	CDS	1482	2609	.	-	0	ID=cds-WP_023224010.1;Parent=gene-C9F00_RS17765;Dbxref=GenBank:WP_023224010.1;Name=WP_023224010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=C9F00_RS17765;product=DUF4056 domain-containing protein;protein_id=WP_023224010.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	2606	3745	.	-	.	ID=gene-C9F00_RS17770;Name=C9F00_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17770;old_locus_tag=C9F00_18215
NZ_PYKC01000114.1	Protein Homology	CDS	2606	3745	.	-	0	ID=cds-WP_050067751.1;Parent=gene-C9F00_RS17770;Dbxref=GenBank:WP_050067751.1;Name=WP_050067751.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=C9F00_RS17770;product=BamA/TamA family outer membrane protein;protein_id=WP_050067751.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	3742	4764	.	-	.	ID=gene-C9F00_RS17775;Name=C9F00_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17775;old_locus_tag=C9F00_18220
NZ_PYKC01000114.1	Protein Homology	CDS	3742	4764	.	-	0	ID=cds-WP_135369183.1;Parent=gene-C9F00_RS17775;Dbxref=GenBank:WP_135369183.1;Name=WP_135369183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=C9F00_RS17775;product=hypothetical protein;protein_id=WP_135369183.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	4966	5778	.	-	.	ID=gene-C9F00_RS17780;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9F00_RS17780;old_locus_tag=C9F00_18225
NZ_PYKC01000114.1	Protein Homology	CDS	4966	5778	.	-	0	ID=cds-WP_000985571.1;Parent=gene-C9F00_RS17780;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=C9F00_RS17780;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	6218	6910	.	+	.	ID=gene-C9F00_RS17785;Name=C9F00_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17785;old_locus_tag=C9F00_18230
NZ_PYKC01000114.1	Protein Homology	CDS	6218	6910	.	+	0	ID=cds-WP_080220794.1;Parent=gene-C9F00_RS17785;Dbxref=GenBank:WP_080220794.1;Name=WP_080220794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=C9F00_RS17785;product=hypothetical protein;protein_id=WP_080220794.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	7261	9675	.	-	.	ID=gene-C9F00_RS17790;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9F00_RS17790;old_locus_tag=C9F00_18235
NZ_PYKC01000114.1	Protein Homology	CDS	7261	9675	.	-	0	ID=cds-WP_000072047.1;Parent=gene-C9F00_RS17790;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9F00_RS17790;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	9704	10777	.	-	.	ID=gene-C9F00_RS17795;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9F00_RS17795;old_locus_tag=C9F00_18240
NZ_PYKC01000114.1	Protein Homology	CDS	9704	10777	.	-	0	ID=cds-WP_000060081.1;Parent=gene-C9F00_RS17795;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9F00_RS17795;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	10925	12025	.	-	.	ID=gene-C9F00_RS17800;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9F00_RS17800;old_locus_tag=C9F00_18245
NZ_PYKC01000114.1	Protein Homology	CDS	10925	12025	.	-	0	ID=cds-WP_000673474.1;Parent=gene-C9F00_RS17800;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F00_RS17800;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	12030	13430	.	-	.	ID=gene-C9F00_RS17805;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9F00_RS17805;old_locus_tag=C9F00_18250
NZ_PYKC01000114.1	Protein Homology	CDS	12030	13430	.	-	0	ID=cds-WP_000059093.1;Parent=gene-C9F00_RS17805;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9F00_RS17805;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	13770	13862	.	+	.	ID=gene-C9F00_RS24880;Name=C9F00_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24880
NZ_PYKC01000114.1	Protein Homology	CDS	13770	13862	.	+	0	ID=cds-WP_418142141.1;Parent=gene-C9F00_RS24880;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=C9F00_RS24880;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	14091	14231	.	+	.	ID=gene-C9F00_RS17810;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9F00_RS17810;old_locus_tag=C9F00_18255
NZ_PYKC01000114.1	Protein Homology	CDS	14091	14231	.	+	0	ID=cds-WP_000831330.1;Parent=gene-C9F00_RS17810;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9F00_RS17810;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	14248	14607	.	+	.	ID=gene-C9F00_RS17815;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9F00_RS17815;old_locus_tag=C9F00_18260
NZ_PYKC01000114.1	Protein Homology	CDS	14248	14607	.	+	0	ID=cds-WP_000239725.1;Parent=gene-C9F00_RS17815;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9F00_RS17815;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	14571	14828	.	+	.	ID=gene-C9F00_RS17820;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9F00_RS17820;old_locus_tag=C9F00_18265
NZ_PYKC01000114.1	Protein Homology	CDS	14571	14828	.	+	0	ID=cds-WP_001307474.1;Parent=gene-C9F00_RS17820;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9F00_RS17820;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	14831	16477	.	+	.	ID=gene-C9F00_RS17825;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9F00_RS17825;old_locus_tag=C9F00_18270
NZ_PYKC01000114.1	Protein Homology	CDS	14831	16477	.	+	0	ID=cds-WP_000378281.1;Parent=gene-C9F00_RS17825;Dbxref=GenBank:WP_000378281.1;Name=WP_000378281.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9F00_RS17825;product=membrane protein insertase YidC;protein_id=WP_000378281.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	16618	17982	.	+	.	ID=gene-C9F00_RS17830;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9F00_RS17830;old_locus_tag=C9F00_18275
NZ_PYKC01000114.1	Protein Homology	CDS	16618	17982	.	+	0	ID=cds-WP_000019081.1;Parent=gene-C9F00_RS17830;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9F00_RS17830;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	18165	19352	.	+	.	ID=gene-C9F00_RS17835;Name=C9F00_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17835;old_locus_tag=C9F00_18280
NZ_PYKC01000114.1	Protein Homology	CDS	18165	19352	.	+	0	ID=cds-WP_000819609.1;Parent=gene-C9F00_RS17835;Dbxref=GenBank:WP_000819609.1;Name=WP_000819609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=C9F00_RS17835;product=MFS transporter;protein_id=WP_000819609.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	19321	20280	.	+	.	ID=gene-C9F00_RS17840;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9F00_RS17840;old_locus_tag=C9F00_18285
NZ_PYKC01000114.1	Protein Homology	CDS	19321	20280	.	+	0	ID=cds-WP_000749370.1;Parent=gene-C9F00_RS17840;Dbxref=GenBank:WP_000749370.1;Name=WP_000749370.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F00_RS17840;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749370.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	20438	21193	.	+	.	ID=gene-C9F00_RS17845;Name=C9F00_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17845;old_locus_tag=C9F00_18290
NZ_PYKC01000114.1	Protein Homology	CDS	20438	21193	.	+	0	ID=cds-WP_000190678.1;Parent=gene-C9F00_RS17845;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9F00_RS17845;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	21193	21777	.	+	.	ID=gene-C9F00_RS17850;Name=C9F00_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17850;old_locus_tag=C9F00_18295
NZ_PYKC01000114.1	Protein Homology	CDS	21193	21777	.	+	0	ID=cds-WP_001521186.1;Parent=gene-C9F00_RS17850;Dbxref=GenBank:WP_001521186.1;Name=WP_001521186.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9F00_RS17850;product=NADPH-dependent FMN reductase;protein_id=WP_001521186.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	21822	23159	.	-	.	ID=gene-C9F00_RS17855;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=C9F00_RS17855;old_locus_tag=C9F00_18300
NZ_PYKC01000114.1	Protein Homology	CDS	21822	23159	.	-	0	ID=cds-WP_001521829.1;Parent=gene-C9F00_RS17855;Dbxref=GenBank:WP_001521829.1;Name=WP_001521829.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9F00_RS17855;product=adenine permease AdeP;protein_id=WP_001521829.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	23328	23993	.	+	.	ID=gene-C9F00_RS17860;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9F00_RS17860;old_locus_tag=C9F00_18305
NZ_PYKC01000114.1	Protein Homology	CDS	23328	23993	.	+	0	ID=cds-WP_135369100.1;Parent=gene-C9F00_RS17860;Dbxref=GenBank:WP_135369100.1;Name=WP_135369100.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9F00_RS17860;product=6-phosphogluconate phosphatase;protein_id=WP_135369100.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	24088	24813	.	-	.	ID=gene-C9F00_RS17865;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9F00_RS17865;old_locus_tag=C9F00_18310
NZ_PYKC01000114.1	Protein Homology	CDS	24088	24813	.	-	0	ID=cds-WP_000377800.1;Parent=gene-C9F00_RS17865;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9F00_RS17865;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	24828	25601	.	-	.	ID=gene-C9F00_RS17870;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9F00_RS17870;old_locus_tag=C9F00_18315
NZ_PYKC01000114.1	Protein Homology	CDS	24828	25601	.	-	0	ID=cds-WP_000063118.1;Parent=gene-C9F00_RS17870;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9F00_RS17870;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	25688	26578	.	-	.	ID=gene-C9F00_RS17875;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9F00_RS17875;old_locus_tag=C9F00_18320
NZ_PYKC01000114.1	Protein Homology	CDS	25688	26578	.	-	0	ID=cds-WP_000212199.1;Parent=gene-C9F00_RS17875;Dbxref=GenBank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9F00_RS17875;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	26578	27537	.	-	.	ID=gene-C9F00_RS17880;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9F00_RS17880;old_locus_tag=C9F00_18325
NZ_PYKC01000114.1	Protein Homology	CDS	26578	27537	.	-	0	ID=cds-WP_000741630.1;Parent=gene-C9F00_RS17880;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9F00_RS17880;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	27673	28713	.	-	.	ID=gene-C9F00_RS17885;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9F00_RS17885;old_locus_tag=C9F00_18330
NZ_PYKC01000114.1	Protein Homology	CDS	27673	28713	.	-	0	ID=cds-WP_000867131.1;Parent=gene-C9F00_RS17885;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9F00_RS17885;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	28880	30253	.	-	.	ID=gene-C9F00_RS24530;Name=C9F00_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24530;old_locus_tag=C9F00_18335
NZ_PYKC01000114.1	Protein Homology	CDS	28880	30253	.	-	0	ID=cds-WP_001525663.1;Parent=gene-C9F00_RS24530;Dbxref=GenBank:WP_001525663.1;Name=WP_001525663.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F00_RS24530;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_001525663.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	30302	31120	.	-	.	ID=gene-C9F00_RS24535;Name=C9F00_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24535;old_locus_tag=C9F00_18340
NZ_PYKC01000114.1	Protein Homology	CDS	30302	31120	.	-	0	ID=cds-WP_000166716.1;Parent=gene-C9F00_RS24535;Dbxref=GenBank:WP_000166716.1;Name=WP_000166716.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9F00_RS24535;product=shikimate 5-dehydrogenase;protein_id=WP_000166716.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	31215	32972	.	+	.	ID=gene-C9F00_RS17900;Name=C9F00_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17900;old_locus_tag=C9F00_18345
NZ_PYKC01000114.1	Protein Homology	CDS	31215	32972	.	+	0	ID=cds-WP_000213165.1;Parent=gene-C9F00_RS17900;Dbxref=GenBank:WP_000213165.1;Name=WP_000213165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9F00_RS17900;product=SgrR family transcriptional regulator;protein_id=WP_000213165.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	33123	34952	.	-	.	ID=gene-C9F00_RS17905;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9F00_RS17905;old_locus_tag=C9F00_18350
NZ_PYKC01000114.1	Protein Homology	CDS	33123	34952	.	-	0	ID=cds-WP_000334052.1;Parent=gene-C9F00_RS17905;Dbxref=GenBank:WP_000334052.1;Name=WP_000334052.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F00_RS17905;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334052.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	35141	36511	.	-	.	ID=gene-C9F00_RS17910;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9F00_RS17910;old_locus_tag=C9F00_18355
NZ_PYKC01000114.1	Protein Homology	CDS	35141	36511	.	-	0	ID=cds-WP_000934851.1;Parent=gene-C9F00_RS17910;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9F00_RS17910;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	36831	37529	.	-	.	ID=gene-C9F00_RS17920;Name=C9F00_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17920;old_locus_tag=C9F00_18365
NZ_PYKC01000114.1	Protein Homology	CDS	36831	37529	.	-	0	ID=cds-WP_000009908.1;Parent=gene-C9F00_RS17920;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9F00_RS17920;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	37759	38178	.	-	.	ID=gene-C9F00_RS17925;Name=C9F00_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17925;old_locus_tag=C9F00_18370
NZ_PYKC01000114.1	Protein Homology	CDS	37759	38178	.	-	0	ID=cds-WP_001251971.1;Parent=gene-C9F00_RS17925;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9F00_RS17925;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	38199	39581	.	-	.	ID=gene-C9F00_RS17930;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9F00_RS17930;old_locus_tag=C9F00_18375
NZ_PYKC01000114.1	Protein Homology	CDS	38199	39581	.	-	0	ID=cds-WP_000190499.1;Parent=gene-C9F00_RS17930;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9F00_RS17930;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	39608	40471	.	-	.	ID=gene-C9F00_RS17935;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9F00_RS17935;old_locus_tag=C9F00_18380
NZ_PYKC01000114.1	Protein Homology	CDS	39608	40471	.	-	0	ID=cds-WP_000896506.1;Parent=gene-C9F00_RS17935;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9F00_RS17935;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	40522	42063	.	-	.	ID=gene-C9F00_RS17940;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9F00_RS17940;old_locus_tag=C9F00_18385
NZ_PYKC01000114.1	Protein Homology	CDS	40522	42063	.	-	0	ID=cds-WP_001176751.1;Parent=gene-C9F00_RS17940;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9F00_RS17940;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	42076	42609	.	-	.	ID=gene-C9F00_RS17945;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9F00_RS17945;old_locus_tag=C9F00_18390
NZ_PYKC01000114.1	Protein Homology	CDS	42076	42609	.	-	0	ID=cds-WP_001288957.1;Parent=gene-C9F00_RS17945;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9F00_RS17945;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	42624	43094	.	-	.	ID=gene-C9F00_RS17950;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9F00_RS17950;old_locus_tag=C9F00_18395
NZ_PYKC01000114.1	Protein Homology	CDS	42624	43094	.	-	0	ID=cds-WP_001052212.1;Parent=gene-C9F00_RS17950;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9F00_RS17950;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	43154	43393	.	-	.	ID=gene-C9F00_RS17955;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9F00_RS17955;old_locus_tag=C9F00_18400
NZ_PYKC01000114.1	Protein Homology	CDS	43154	43393	.	-	0	ID=cds-WP_000429386.1;Parent=gene-C9F00_RS17955;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9F00_RS17955;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	43440	44255	.	-	.	ID=gene-C9F00_RS17960;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9F00_RS17960;old_locus_tag=C9F00_18405
NZ_PYKC01000114.1	Protein Homology	CDS	43440	44255	.	-	0	ID=cds-WP_000135632.1;Parent=gene-C9F00_RS17960;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9F00_RS17960;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	44264	44644	.	-	.	ID=gene-C9F00_RS17965;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9F00_RS17965;old_locus_tag=C9F00_18410
NZ_PYKC01000114.1	Protein Homology	CDS	44264	44644	.	-	0	ID=cds-WP_000116685.1;Parent=gene-C9F00_RS17965;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9F00_RS17965;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	45260	45883	.	-	.	ID=gene-C9F00_RS17970;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9F00_RS17970;old_locus_tag=C9F00_18415
NZ_PYKC01000114.1	Protein Homology	CDS	45260	45883	.	-	0	ID=cds-WP_001519938.1;Parent=gene-C9F00_RS17970;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9F00_RS17970;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	45986	47875	.	-	.	ID=gene-C9F00_RS17975;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9F00_RS17975;old_locus_tag=C9F00_18420
NZ_PYKC01000114.1	Protein Homology	CDS	45986	47875	.	-	0	ID=cds-WP_000499872.1;Parent=gene-C9F00_RS17975;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9F00_RS17975;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	48254	48697	.	-	.	ID=gene-C9F00_RS17985;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9F00_RS17985;old_locus_tag=C9F00_18430
NZ_PYKC01000114.1	Protein Homology	CDS	48254	48697	.	-	0	ID=cds-WP_001518982.1;Parent=gene-C9F00_RS17985;Dbxref=GenBank:WP_001518982.1;Name=WP_001518982.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9F00_RS17985;product=FMN-binding protein MioC;protein_id=WP_001518982.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	48787	49245	.	-	.	ID=gene-C9F00_RS17990;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9F00_RS17990;old_locus_tag=C9F00_18435
NZ_PYKC01000114.1	Protein Homology	CDS	48787	49245	.	-	0	ID=cds-WP_000433018.1;Parent=gene-C9F00_RS17990;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9F00_RS17990;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	49396	50388	.	+	.	ID=gene-C9F00_RS17995;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9F00_RS17995;old_locus_tag=C9F00_18440
NZ_PYKC01000114.1	Protein Homology	CDS	49396	50388	.	+	0	ID=cds-WP_000845123.1;Parent=gene-C9F00_RS17995;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9F00_RS17995;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	50393	51844	.	-	.	ID=gene-C9F00_RS18000;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9F00_RS18000;old_locus_tag=C9F00_18445
NZ_PYKC01000114.1	Protein Homology	CDS	50393	51844	.	-	0	ID=cds-WP_135492419.1;Parent=gene-C9F00_RS18000;Dbxref=GenBank:WP_135492419.1;Name=WP_135492419.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9F00_RS18000;product=ATPase RavA stimulator ViaA;protein_id=WP_135492419.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	51838	53334	.	-	.	ID=gene-C9F00_RS18005;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=C9F00_RS18005;old_locus_tag=C9F00_18450
NZ_PYKC01000114.1	Protein Homology	CDS	51838	53334	.	-	0	ID=cds-WP_023227873.1;Parent=gene-C9F00_RS18005;Dbxref=GenBank:WP_023227873.1;Name=WP_023227873.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9F00_RS18005;product=ATPase RavA;protein_id=WP_023227873.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	53682	55550	.	+	.	ID=gene-C9F00_RS18010;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9F00_RS18010;old_locus_tag=C9F00_18455
NZ_PYKC01000114.1	Protein Homology	CDS	53682	55550	.	+	0	ID=cds-WP_000102338.1;Parent=gene-C9F00_RS18010;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9F00_RS18010;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	55767	56186	.	+	.	ID=gene-C9F00_RS18015;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9F00_RS18015;old_locus_tag=C9F00_18460
NZ_PYKC01000114.1	Protein Homology	CDS	55767	56186	.	+	0	ID=cds-WP_000715945.1;Parent=gene-C9F00_RS18015;Dbxref=GenBank:WP_000715945.1;Name=WP_000715945.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9F00_RS18015;product=D-ribose pyranase;protein_id=WP_000715945.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	56194	57699	.	+	.	ID=gene-C9F00_RS18020;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9F00_RS18020;old_locus_tag=C9F00_18465
NZ_PYKC01000114.1	Protein Homology	CDS	56194	57699	.	+	0	ID=cds-WP_000339366.1;Parent=gene-C9F00_RS18020;Dbxref=GenBank:WP_000339366.1;Name=WP_000339366.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9F00_RS18020;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339366.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	57705	58670	.	+	.	ID=gene-C9F00_RS18025;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9F00_RS18025;old_locus_tag=C9F00_18470
NZ_PYKC01000114.1	Protein Homology	CDS	57705	58670	.	+	0	ID=cds-WP_000211345.1;Parent=gene-C9F00_RS18025;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9F00_RS18025;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	58695	59585	.	+	.	ID=gene-C9F00_RS18030;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9F00_RS18030;old_locus_tag=C9F00_18475
NZ_PYKC01000114.1	Protein Homology	CDS	58695	59585	.	+	0	ID=cds-WP_001056260.1;Parent=gene-C9F00_RS18030;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9F00_RS18030;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	59718	60647	.	+	.	ID=gene-C9F00_RS18035;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F00_RS18035;old_locus_tag=C9F00_18480
NZ_PYKC01000114.1	Protein Homology	CDS	59718	60647	.	+	0	ID=cds-WP_000844730.1;Parent=gene-C9F00_RS18035;Dbxref=GenBank:WP_000844730.1;Name=WP_000844730.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9F00_RS18035;product=ribokinase;protein_id=WP_000844730.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	60651	61649	.	+	.	ID=gene-C9F00_RS18040;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9F00_RS18040;old_locus_tag=C9F00_18485
NZ_PYKC01000114.1	Protein Homology	CDS	60651	61649	.	+	0	ID=cds-WP_000224495.1;Parent=gene-C9F00_RS18040;Dbxref=GenBank:WP_000224495.1;Name=WP_000224495.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9F00_RS18040;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224495.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	61615	63042	.	-	.	ID=gene-C9F00_RS18045;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9F00_RS18045;old_locus_tag=C9F00_18490
NZ_PYKC01000114.1	Protein Homology	CDS	61615	63042	.	-	0	ID=cds-WP_023209035.1;Parent=gene-C9F00_RS18045;Dbxref=GenBank:WP_023209035.1;Name=WP_023209035.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9F00_RS18045;product=multidrug transporter subunit MdtD;protein_id=WP_023209035.1;transl_table=11
NZ_PYKC01000114.1	RefSeq	gene	63054	63758	.	-	.	ID=gene-C9F00_RS18050;Name=C9F00_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18050;old_locus_tag=C9F00_18495
NZ_PYKC01000114.1	Protein Homology	CDS	63054	63758	.	-	0	ID=cds-WP_135369091.1;Parent=gene-C9F00_RS18050;Dbxref=GenBank:WP_135369091.1;Name=WP_135369091.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9F00_RS18050;product=FadR/GntR family transcriptional regulator;protein_id=WP_135369091.1;transl_table=11
##sequence-region NZ_PYKC01000107.1 1 771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000107.1	RefSeq	region	1	771	.	+	.	ID=NZ_PYKC01000107.1:1..771;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000107.1	RefSeq	pseudogene	1	771	.	-	.	ID=gene-C9F00_RS17100;Name=C9F00_RS17100;end_range=771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17100;old_locus_tag=C9F00_17525;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000107.1	Protein Homology	CDS	1	771	.	-	0	ID=cds-C9F00_RS17100;Parent=gene-C9F00_RS17100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F00_RS17100;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000078.1 1 771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000078.1	RefSeq	region	1	771	.	+	.	ID=NZ_PYKC01000078.1:1..771;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000078.1	RefSeq	pseudogene	1	771	.	-	.	ID=gene-C9F00_RS13275;Name=C9F00_RS13275;end_range=771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS13275;old_locus_tag=C9F00_13605;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000078.1	Protein Homology	CDS	1	771	.	-	0	ID=cds-C9F00_RS13275;Parent=gene-C9F00_RS13275;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=771,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9F00_RS13275;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000095.1 1 1933
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000095.1	RefSeq	region	1	1933	.	+	.	ID=NZ_PYKC01000095.1:1..1933;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000095.1	RefSeq	pseudogene	13	627	.	-	.	ID=gene-C9F00_RS15425;Name=C9F00_RS15425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15425;old_locus_tag=C9F00_15795;partial=true;pseudo=true;start_range=.,13
NZ_PYKC01000095.1	Protein Homology	CDS	13	627	.	-	0	ID=cds-C9F00_RS15425;Parent=gene-C9F00_RS15425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9F00_RS15425;partial=true;product=MFS transporter;pseudo=true;start_range=.,13;transl_table=11
NZ_PYKC01000095.1	RefSeq	pseudogene	858	989	.	-	.	ID=gene-C9F00_RS24480;Name=C9F00_RS24480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24480;partial=true;pseudo=true;start_range=.,858
NZ_PYKC01000095.1	Protein Homology	CDS	858	989	.	-	0	ID=cds-C9F00_RS24480;Parent=gene-C9F00_RS24480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=C9F00_RS24480;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,858;transl_table=11
NZ_PYKC01000095.1	RefSeq	pseudogene	1164	1892	.	+	.	ID=gene-C9F00_RS15430;Name=C9F00_RS15430;end_range=1892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15430;old_locus_tag=C9F00_15800;partial=true;pseudo=true
NZ_PYKC01000095.1	Protein Homology	CDS	1164	1892	.	+	0	ID=cds-C9F00_RS15430;Parent=gene-C9F00_RS15430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F00_RS15430;partial=true;product=SEL1-like repeat protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000046.1 1 63932
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000046.1	RefSeq	region	1	63932	.	+	.	ID=NZ_PYKC01000046.1:1..63932;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000046.1	RefSeq	gene	91	609	.	-	.	ID=gene-C9F00_RS07405;Name=C9F00_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07405;old_locus_tag=C9F00_07560
NZ_PYKC01000046.1	Protein Homology	CDS	91	609	.	-	0	ID=cds-WP_010989016.1;Parent=gene-C9F00_RS07405;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9F00_RS07405;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	659	2152	.	-	.	ID=gene-C9F00_RS07410;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9F00_RS07410;old_locus_tag=C9F00_07565
NZ_PYKC01000046.1	Protein Homology	CDS	659	2152	.	-	0	ID=cds-WP_001048658.1;Parent=gene-C9F00_RS07410;Dbxref=GenBank:WP_001048658.1;Name=WP_001048658.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9F00_RS07410;product=diguanylate cyclase DgcJ;protein_id=WP_001048658.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	2409	2669	.	+	.	ID=gene-C9F00_RS07415;Name=C9F00_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07415;old_locus_tag=C9F00_07570
NZ_PYKC01000046.1	GeneMarkS-2+	CDS	2409	2669	.	+	0	ID=cds-WP_146713048.1;Parent=gene-C9F00_RS07415;Dbxref=GenBank:WP_146713048.1;Name=WP_146713048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS07415;product=hypothetical protein;protein_id=WP_146713048.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	2822	4108	.	-	.	ID=gene-C9F00_RS07420;Name=C9F00_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07420;old_locus_tag=C9F00_07575
NZ_PYKC01000046.1	Protein Homology	CDS	2822	4108	.	-	0	ID=cds-WP_023244288.1;Parent=gene-C9F00_RS07420;Dbxref=GenBank:WP_023244288.1;Name=WP_023244288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F00_RS07420;product=YeaH/YhbH family protein;protein_id=WP_023244288.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	4231	6165	.	-	.	ID=gene-C9F00_RS07425;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9F00_RS07425;old_locus_tag=C9F00_07580
NZ_PYKC01000046.1	Protein Homology	CDS	4231	6165	.	-	0	ID=cds-WP_001518010.1;Parent=gene-C9F00_RS07425;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=C9F00_RS07425;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	6591	7337	.	+	.	ID=gene-C9F00_RS07430;Name=C9F00_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07430;old_locus_tag=C9F00_07585
NZ_PYKC01000046.1	Protein Homology	CDS	6591	7337	.	+	0	ID=cds-WP_000163762.1;Parent=gene-C9F00_RS07430;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9F00_RS07430;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	7627	8823	.	+	.	ID=gene-C9F00_RS07435;Name=C9F00_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07435;old_locus_tag=C9F00_07590
NZ_PYKC01000046.1	Protein Homology	CDS	7627	8823	.	+	0	ID=cds-WP_079802047.1;Parent=gene-C9F00_RS07435;Dbxref=GenBank:WP_079802047.1;Name=WP_079802047.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9F00_RS07435;product=anaerobic sulfatase maturase;protein_id=WP_079802047.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	8920	9777	.	+	.	ID=gene-C9F00_RS07440;Name=C9F00_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07440;old_locus_tag=C9F00_07595
NZ_PYKC01000046.1	Protein Homology	CDS	8920	9777	.	+	0	ID=cds-WP_000843751.1;Parent=gene-C9F00_RS07440;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9F00_RS07440;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	9876	10760	.	-	.	ID=gene-C9F00_RS07445;Name=C9F00_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07445;old_locus_tag=C9F00_07600
NZ_PYKC01000046.1	Protein Homology	CDS	9876	10760	.	-	0	ID=cds-WP_000608662.1;Parent=gene-C9F00_RS07445;Dbxref=GenBank:WP_000608662.1;Name=WP_000608662.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F00_RS07445;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608662.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	11095	12090	.	-	.	ID=gene-C9F00_RS07455;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9F00_RS07455;old_locus_tag=C9F00_07610
NZ_PYKC01000046.1	Protein Homology	CDS	11095	12090	.	-	0	ID=cds-WP_000153505.1;Parent=gene-C9F00_RS07455;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9F00_RS07455;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	12432	12845	.	+	.	ID=gene-C9F00_RS07460;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9F00_RS07460;old_locus_tag=C9F00_07615
NZ_PYKC01000046.1	Protein Homology	CDS	12432	12845	.	+	0	ID=cds-WP_001519539.1;Parent=gene-C9F00_RS07460;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9F00_RS07460;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	12887	13165	.	+	.	ID=gene-C9F00_RS07465;Name=C9F00_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07465;old_locus_tag=C9F00_07620
NZ_PYKC01000046.1	Protein Homology	CDS	12887	13165	.	+	0	ID=cds-WP_001046864.1;Parent=gene-C9F00_RS07465;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9F00_RS07465;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	pseudogene	13275	13774	.	-	.	ID=gene-C9F00_RS24385;Name=C9F00_RS24385;end_range=13774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24385;partial=true;pseudo=true
NZ_PYKC01000046.1	Protein Homology	CDS	13275	13774	.	-	0	ID=cds-C9F00_RS24385;Parent=gene-C9F00_RS24385;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;end_range=13774,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228952.1;locus_tag=C9F00_RS24385;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	14067	15143	.	+	.	ID=gene-C9F00_RS07470;Name=C9F00_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07470;old_locus_tag=C9F00_07625
NZ_PYKC01000046.1	Protein Homology	CDS	14067	15143	.	+	0	ID=cds-WP_001728100.1;Parent=gene-C9F00_RS07470;Dbxref=GenBank:WP_001728100.1;Name=WP_001728100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F00_RS07470;product=zinc-binding dehydrogenase;protein_id=WP_001728100.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	15170	16549	.	+	.	ID=gene-C9F00_RS07475;Name=C9F00_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07475;old_locus_tag=C9F00_07630
NZ_PYKC01000046.1	Protein Homology	CDS	15170	16549	.	+	0	ID=cds-WP_057935506.1;Parent=gene-C9F00_RS07475;Dbxref=GenBank:WP_057935506.1;Name=WP_057935506.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F00_RS07475;product=MFS transporter;protein_id=WP_057935506.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	16560	17603	.	+	.	ID=gene-C9F00_RS07480;Name=C9F00_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07480;old_locus_tag=C9F00_07635
NZ_PYKC01000046.1	Protein Homology	CDS	16560	17603	.	+	0	ID=cds-WP_000798074.1;Parent=gene-C9F00_RS07480;Dbxref=GenBank:WP_000798074.1;Name=WP_000798074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9F00_RS07480;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798074.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	17625	18461	.	+	.	ID=gene-C9F00_RS07485;Name=C9F00_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07485;old_locus_tag=C9F00_07640
NZ_PYKC01000046.1	Protein Homology	CDS	17625	18461	.	+	0	ID=cds-WP_000878867.1;Parent=gene-C9F00_RS07485;Dbxref=GenBank:WP_000878867.1;Name=WP_000878867.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9F00_RS07485;product=ketose-bisphosphate aldolase;protein_id=WP_000878867.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	18466	19413	.	+	.	ID=gene-C9F00_RS07490;Name=C9F00_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07490;old_locus_tag=C9F00_07645
NZ_PYKC01000046.1	Protein Homology	CDS	18466	19413	.	+	0	ID=cds-WP_000343332.1;Parent=gene-C9F00_RS07490;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=C9F00_RS07490;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	19423	20406	.	+	.	ID=gene-C9F00_RS07495;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=C9F00_RS07495;old_locus_tag=C9F00_07650
NZ_PYKC01000046.1	Protein Homology	CDS	19423	20406	.	+	0	ID=cds-WP_000782142.1;Parent=gene-C9F00_RS07495;Dbxref=GenBank:WP_000782142.1;Name=WP_000782142.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9F00_RS07495;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782142.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	20536	21294	.	+	.	ID=gene-C9F00_RS07500;Name=C9F00_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07500;old_locus_tag=C9F00_07655
NZ_PYKC01000046.1	Protein Homology	CDS	20536	21294	.	+	0	ID=cds-WP_079902888.1;Parent=gene-C9F00_RS07500;Dbxref=GenBank:WP_079902888.1;Name=WP_079902888.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=C9F00_RS07500;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_079902888.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	21430	22788	.	+	.	ID=gene-C9F00_RS07505;Name=C9F00_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07505;old_locus_tag=C9F00_07660
NZ_PYKC01000046.1	Protein Homology	CDS	21430	22788	.	+	0	ID=cds-WP_057935504.1;Parent=gene-C9F00_RS07505;Dbxref=GenBank:WP_057935504.1;Name=WP_057935504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=C9F00_RS07505;product=MFS transporter;protein_id=WP_057935504.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	22891	23547	.	-	.	ID=gene-C9F00_RS07510;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9F00_RS07510;old_locus_tag=C9F00_07665
NZ_PYKC01000046.1	Protein Homology	CDS	22891	23547	.	-	0	ID=cds-WP_000184707.1;Parent=gene-C9F00_RS07510;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9F00_RS07510;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	23574	24590	.	-	.	ID=gene-C9F00_RS07515;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9F00_RS07515;old_locus_tag=C9F00_07670
NZ_PYKC01000046.1	Protein Homology	CDS	23574	24590	.	-	0	ID=cds-WP_001170136.1;Parent=gene-C9F00_RS07515;Dbxref=GenBank:WP_001170136.1;Name=WP_001170136.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9F00_RS07515;product=asparaginase;protein_id=WP_001170136.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	24686	26542	.	-	.	ID=gene-C9F00_RS07520;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9F00_RS07520;old_locus_tag=C9F00_07675
NZ_PYKC01000046.1	Protein Homology	CDS	24686	26542	.	-	0	ID=cds-WP_050068356.1;Parent=gene-C9F00_RS07520;Dbxref=GenBank:WP_050068356.1;Name=WP_050068356.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9F00_RS07520;product=signal peptide peptidase SppA;protein_id=WP_050068356.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	26716	27267	.	+	.	ID=gene-C9F00_RS07525;Name=C9F00_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07525;old_locus_tag=C9F00_07680
NZ_PYKC01000046.1	Protein Homology	CDS	26716	27267	.	+	0	ID=cds-WP_000339313.1;Parent=gene-C9F00_RS07525;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9F00_RS07525;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	27385	28428	.	+	.	ID=gene-C9F00_RS07530;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9F00_RS07530;old_locus_tag=C9F00_07685
NZ_PYKC01000046.1	Protein Homology	CDS	27385	28428	.	+	0	ID=cds-WP_001294900.1;Parent=gene-C9F00_RS07530;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F00_RS07530;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	28433	30382	.	+	.	ID=gene-C9F00_RS07535;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9F00_RS07535;old_locus_tag=C9F00_07690
NZ_PYKC01000046.1	Protein Homology	CDS	28433	30382	.	+	0	ID=cds-WP_001235863.1;Parent=gene-C9F00_RS07535;Dbxref=GenBank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9F00_RS07535;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	30412	31755	.	-	.	ID=gene-C9F00_RS07540;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9F00_RS07540;old_locus_tag=C9F00_07695
NZ_PYKC01000046.1	Protein Homology	CDS	30412	31755	.	-	0	ID=cds-WP_000372865.1;Parent=gene-C9F00_RS07540;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9F00_RS07540;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	31994	32269	.	+	.	ID=gene-C9F00_RS07545;Name=C9F00_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07545;old_locus_tag=C9F00_07700
NZ_PYKC01000046.1	Protein Homology	CDS	31994	32269	.	+	0	ID=cds-WP_050068357.1;Parent=gene-C9F00_RS07545;Dbxref=GenBank:WP_050068357.1;Name=WP_050068357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=C9F00_RS07545;product=YnjH family protein;protein_id=WP_050068357.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	32229	32645	.	-	.	ID=gene-C9F00_RS07550;Name=C9F00_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07550;old_locus_tag=C9F00_07705
NZ_PYKC01000046.1	Protein Homology	CDS	32229	32645	.	-	0	ID=cds-WP_000592135.1;Parent=gene-C9F00_RS07550;Dbxref=GenBank:WP_000592135.1;Name=WP_000592135.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9F00_RS07550;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592135.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	32718	33524	.	-	.	ID=gene-C9F00_RS07555;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9F00_RS07555;old_locus_tag=C9F00_07710
NZ_PYKC01000046.1	Protein Homology	CDS	32718	33524	.	-	0	ID=cds-WP_000673954.1;Parent=gene-C9F00_RS07555;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9F00_RS07555;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	33970	35196	.	+	.	ID=gene-C9F00_RS07560;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=C9F00_RS07560;old_locus_tag=C9F00_07720
NZ_PYKC01000046.1	Protein Homology	CDS	33970	35196	.	+	0	ID=cds-WP_023226924.1;Parent=gene-C9F00_RS07560;Dbxref=GenBank:WP_023226924.1;Name=WP_023226924.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9F00_RS07560;product=succinylornithine/acetylornithine transaminase;protein_id=WP_023226924.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	35187	36221	.	+	.	ID=gene-C9F00_RS07565;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9F00_RS07565;old_locus_tag=C9F00_07725
NZ_PYKC01000046.1	Protein Homology	CDS	35187	36221	.	+	0	ID=cds-WP_135492225.1;Parent=gene-C9F00_RS07565;Dbxref=GenBank:WP_135492225.1;Name=WP_135492225.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F00_RS07565;product=arginine N-succinyltransferase;protein_id=WP_135492225.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	36218	37696	.	+	.	ID=gene-C9F00_RS07570;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9F00_RS07570;old_locus_tag=C9F00_07730
NZ_PYKC01000046.1	Protein Homology	CDS	36218	37696	.	+	0	ID=cds-WP_050068358.1;Parent=gene-C9F00_RS07570;Dbxref=GenBank:WP_050068358.1;Name=WP_050068358.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9F00_RS07570;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_050068358.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	37693	39036	.	+	.	ID=gene-C9F00_RS07575;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9F00_RS07575;old_locus_tag=C9F00_07735
NZ_PYKC01000046.1	Protein Homology	CDS	37693	39036	.	+	0	ID=cds-WP_050068359.1;Parent=gene-C9F00_RS07575;Dbxref=GenBank:WP_050068359.1;Name=WP_050068359.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9F00_RS07575;product=N-succinylarginine dihydrolase;protein_id=WP_050068359.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	39029	39997	.	+	.	ID=gene-C9F00_RS07580;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9F00_RS07580;old_locus_tag=C9F00_07740
NZ_PYKC01000046.1	Protein Homology	CDS	39029	39997	.	+	0	ID=cds-WP_050068360.1;Parent=gene-C9F00_RS07580;Dbxref=GenBank:WP_050068360.1;Name=WP_050068360.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9F00_RS07580;product=succinylglutamate desuccinylase;protein_id=WP_050068360.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	40333	40818	.	+	.	ID=gene-C9F00_RS07585;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9F00_RS07585;old_locus_tag=C9F00_07750
NZ_PYKC01000046.1	Protein Homology	CDS	40333	40818	.	+	0	ID=cds-WP_001229001.1;Parent=gene-C9F00_RS07585;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9F00_RS07585;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	40893	41774	.	-	.	ID=gene-C9F00_RS07590;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9F00_RS07590;old_locus_tag=C9F00_07755
NZ_PYKC01000046.1	Protein Homology	CDS	40893	41774	.	-	0	ID=cds-WP_001518228.1;Parent=gene-C9F00_RS07590;Dbxref=GenBank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9F00_RS07590;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	41895	42722	.	-	.	ID=gene-C9F00_RS07595;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9F00_RS07595;old_locus_tag=C9F00_07760
NZ_PYKC01000046.1	Protein Homology	CDS	41895	42722	.	-	0	ID=cds-WP_000174981.1;Parent=gene-C9F00_RS07595;Dbxref=GenBank:WP_000174981.1;Name=WP_000174981.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9F00_RS07595;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174981.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	42941	43282	.	+	.	ID=gene-C9F00_RS07600;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9F00_RS07600;old_locus_tag=C9F00_07765
NZ_PYKC01000046.1	Protein Homology	CDS	42941	43282	.	+	0	ID=cds-WP_001039301.1;Parent=gene-C9F00_RS07600;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9F00_RS07600;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	43583	43903	.	+	.	ID=gene-C9F00_RS07610;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9F00_RS07610;old_locus_tag=C9F00_07775
NZ_PYKC01000046.1	Protein Homology	CDS	43583	43903	.	+	0	ID=cds-WP_000412161.1;Parent=gene-C9F00_RS07610;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9F00_RS07610;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	43986	45344	.	+	.	ID=gene-C9F00_RS07615;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9F00_RS07615;old_locus_tag=C9F00_07780
NZ_PYKC01000046.1	Protein Homology	CDS	43986	45344	.	+	0	ID=cds-WP_000073064.1;Parent=gene-C9F00_RS07615;Dbxref=GenBank:WP_000073064.1;Name=WP_000073064.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9F00_RS07615;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073064.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	45395	45742	.	+	.	ID=gene-C9F00_RS07620;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9F00_RS07620;old_locus_tag=C9F00_07785
NZ_PYKC01000046.1	Protein Homology	CDS	45395	45742	.	+	0	ID=cds-WP_000459883.1;Parent=gene-C9F00_RS07620;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9F00_RS07620;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	45753	46595	.	+	.	ID=gene-C9F00_RS07625;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9F00_RS07625;old_locus_tag=C9F00_07790
NZ_PYKC01000046.1	Protein Homology	CDS	45753	46595	.	+	0	ID=cds-WP_000983393.1;Parent=gene-C9F00_RS07625;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9F00_RS07625;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	46720	48075	.	+	.	ID=gene-C9F00_RS07630;Name=C9F00_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07630;old_locus_tag=C9F00_07795
NZ_PYKC01000046.1	Protein Homology	CDS	46720	48075	.	+	0	ID=cds-WP_050068361.1;Parent=gene-C9F00_RS07630;Dbxref=GenBank:WP_050068361.1;Name=WP_050068361.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9F00_RS07630;product=6-phospho-beta-glucosidase;protein_id=WP_050068361.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	48088	48846	.	+	.	ID=gene-C9F00_RS07635;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9F00_RS07635;old_locus_tag=C9F00_07800
NZ_PYKC01000046.1	Protein Homology	CDS	48088	48846	.	+	0	ID=cds-WP_135369226.1;Parent=gene-C9F00_RS07635;Dbxref=GenBank:WP_135369226.1;Name=WP_135369226.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9F00_RS07635;product=chitin disaccharide deacetylase;protein_id=WP_135369226.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	48890	51142	.	-	.	ID=gene-C9F00_RS07640;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9F00_RS07640;old_locus_tag=C9F00_07805
NZ_PYKC01000046.1	Protein Homology	CDS	48890	51142	.	-	0	ID=cds-WP_135492227.1;Parent=gene-C9F00_RS07640;Dbxref=GenBank:WP_135492227.1;Name=WP_135492227.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F00_RS07640;product=catalase HPII;protein_id=WP_135492227.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	51507	51749	.	+	.	ID=gene-C9F00_RS07645;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9F00_RS07645;old_locus_tag=C9F00_07810
NZ_PYKC01000046.1	Protein Homology	CDS	51507	51749	.	+	0	ID=cds-WP_000977510.1;Parent=gene-C9F00_RS07645;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9F00_RS07645;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	51852	53243	.	-	.	ID=gene-C9F00_RS07650;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9F00_RS07650;old_locus_tag=C9F00_07815
NZ_PYKC01000046.1	Protein Homology	CDS	51852	53243	.	-	0	ID=cds-WP_001010662.1;Parent=gene-C9F00_RS07650;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9F00_RS07650;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	53380	53979	.	-	.	ID=gene-C9F00_RS07655;Name=C9F00_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07655;old_locus_tag=C9F00_07820
NZ_PYKC01000046.1	Protein Homology	CDS	53380	53979	.	-	0	ID=cds-WP_000505804.1;Parent=gene-C9F00_RS07655;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9F00_RS07655;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	54117	54785	.	-	.	ID=gene-C9F00_RS07660;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9F00_RS07660;old_locus_tag=C9F00_07825
NZ_PYKC01000046.1	Protein Homology	CDS	54117	54785	.	-	0	ID=cds-WP_000106848.1;Parent=gene-C9F00_RS07660;Dbxref=GenBank:WP_000106848.1;Name=WP_000106848.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9F00_RS07660;product=hexitol phosphatase HxpB;protein_id=WP_000106848.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	54934	55470	.	+	.	ID=gene-C9F00_RS07665;Name=C9F00_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07665;old_locus_tag=C9F00_07830
NZ_PYKC01000046.1	Protein Homology	CDS	54934	55470	.	+	0	ID=cds-WP_000222158.1;Parent=gene-C9F00_RS07665;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9F00_RS07665;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	55513	56373	.	-	.	ID=gene-C9F00_RS07670;Name=C9F00_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07670;old_locus_tag=C9F00_07835
NZ_PYKC01000046.1	Protein Homology	CDS	55513	56373	.	-	0	ID=cds-WP_000267686.1;Parent=gene-C9F00_RS07670;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9F00_RS07670;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	56480	56770	.	-	.	ID=gene-C9F00_RS07675;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9F00_RS07675;old_locus_tag=C9F00_07840
NZ_PYKC01000046.1	Protein Homology	CDS	56480	56770	.	-	0	ID=cds-WP_000146133.1;Parent=gene-C9F00_RS07675;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9F00_RS07675;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	56867	57799	.	-	.	ID=gene-C9F00_RS07680;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9F00_RS07680;old_locus_tag=C9F00_07845
NZ_PYKC01000046.1	Protein Homology	CDS	56867	57799	.	-	0	ID=cds-WP_135492229.1;Parent=gene-C9F00_RS07680;Dbxref=GenBank:WP_135492229.1;Name=WP_135492229.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9F00_RS07680;product=6-phosphofructokinase II;protein_id=WP_135492229.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	58088	58846	.	+	.	ID=gene-C9F00_RS07685;Name=C9F00_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07685;old_locus_tag=C9F00_07850
NZ_PYKC01000046.1	Protein Homology	CDS	58088	58846	.	+	0	ID=cds-WP_000770981.1;Parent=gene-C9F00_RS07685;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9F00_RS07685;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	58895	59854	.	-	.	ID=gene-C9F00_RS07690;Name=C9F00_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07690;old_locus_tag=C9F00_07855
NZ_PYKC01000046.1	Protein Homology	CDS	58895	59854	.	-	0	ID=cds-WP_001046434.1;Parent=gene-C9F00_RS07690;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9F00_RS07690;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	59997	60311	.	+	.	ID=gene-C9F00_RS07695;Name=C9F00_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07695;old_locus_tag=C9F00_07860
NZ_PYKC01000046.1	Protein Homology	CDS	59997	60311	.	+	0	ID=cds-WP_000916613.1;Parent=gene-C9F00_RS07695;Dbxref=GenBank:WP_000916613.1;Name=WP_000916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9F00_RS07695;product=hypothetical protein;protein_id=WP_000916613.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	60308	61162	.	+	.	ID=gene-C9F00_RS07700;Name=C9F00_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07700;old_locus_tag=C9F00_07865
NZ_PYKC01000046.1	Protein Homology	CDS	60308	61162	.	+	0	ID=cds-WP_001044093.1;Parent=gene-C9F00_RS07700;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F00_RS07700;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11
NZ_PYKC01000046.1	RefSeq	pseudogene	61335	61540	.	+	.	ID=gene-C9F00_RS07705;Name=C9F00_RS07705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS07705;old_locus_tag=C9F00_07870;pseudo=true
NZ_PYKC01000046.1	Protein Homology	CDS	61335	61540	.	+	0	ID=cds-C9F00_RS07705;Parent=gene-C9F00_RS07705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=C9F00_RS07705;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000046.1	RefSeq	gene	61847	63070	.	-	.	ID=gene-C9F00_RS07710;Name=rfc;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=C9F00_RS07710;old_locus_tag=C9F00_07875
NZ_PYKC01000046.1	Protein Homology	CDS	61847	63070	.	-	0	ID=cds-WP_053445631.1;Parent=gene-C9F00_RS07710;Dbxref=GenBank:WP_053445631.1;Name=WP_053445631.1;gbkey=CDS;gene=rfc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=C9F00_RS07710;product=O-antigen polymerase Rfc;protein_id=WP_053445631.1;transl_table=11
##sequence-region NZ_PYKC01000108.1 1 1892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000108.1	RefSeq	region	1	1892	.	+	.	ID=NZ_PYKC01000108.1:1..1892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000108.1	RefSeq	gene	1	625	.	-	.	ID=gene-C9F00_RS17105;Name=C9F00_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17105;old_locus_tag=C9F00_17530;partial=true;start_range=.,1
NZ_PYKC01000108.1	Protein Homology	CDS	1	625	.	-	0	ID=cds-WP_135492410.1;Parent=gene-C9F00_RS17105;Dbxref=GenBank:WP_135492410.1;Name=WP_135492410.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9F00_RS17105;partial=true;product=ion channel protein;protein_id=WP_135492410.1;start_range=.,1;transl_table=11
NZ_PYKC01000108.1	RefSeq	gene	829	1794	.	+	.	ID=gene-C9F00_RS17110;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9F00_RS17110;old_locus_tag=C9F00_17535
NZ_PYKC01000108.1	Protein Homology	CDS	829	1794	.	+	0	ID=cds-WP_135369207.1;Parent=gene-C9F00_RS17110;Dbxref=GenBank:WP_135369207.1;Name=WP_135369207.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9F00_RS17110;product=glucokinase;protein_id=WP_135369207.1;transl_table=11
##sequence-region NZ_PYKC01000016.1 1 60655
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000016.1	RefSeq	region	1	60655	.	+	.	ID=NZ_PYKC01000016.1:1..60655;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000016.1	RefSeq	gene	42	806	.	+	.	ID=gene-C9F00_RS03265;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9F00_RS03265;old_locus_tag=C9F00_03320
NZ_PYKC01000016.1	Protein Homology	CDS	42	806	.	+	0	ID=cds-WP_135492116.1;Parent=gene-C9F00_RS03265;Dbxref=GenBank:WP_135492116.1;Name=WP_135492116.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906892.1;locus_tag=C9F00_RS03265;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_135492116.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	855	1514	.	+	.	ID=gene-C9F00_RS03270;Name=C9F00_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03270;old_locus_tag=C9F00_03325
NZ_PYKC01000016.1	Protein Homology	CDS	855	1514	.	+	0	ID=cds-WP_000364318.1;Parent=gene-C9F00_RS03270;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9F00_RS03270;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	1664	2578	.	+	.	ID=gene-C9F00_RS03275;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9F00_RS03275;old_locus_tag=C9F00_03330
NZ_PYKC01000016.1	Protein Homology	CDS	1664	2578	.	+	0	ID=cds-WP_000118383.1;Parent=gene-C9F00_RS03275;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9F00_RS03275;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	2646	3914	.	+	.	ID=gene-C9F00_RS03280;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9F00_RS03280;old_locus_tag=C9F00_03335
NZ_PYKC01000016.1	Protein Homology	CDS	2646	3914	.	+	0	ID=cds-WP_000792289.1;Parent=gene-C9F00_RS03280;Dbxref=GenBank:WP_000792289.1;Name=WP_000792289.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9F00_RS03280;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792289.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	3904	4578	.	+	.	ID=gene-C9F00_RS03285;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9F00_RS03285;old_locus_tag=C9F00_03340
NZ_PYKC01000016.1	Protein Homology	CDS	3904	4578	.	+	0	ID=cds-WP_000157035.1;Parent=gene-C9F00_RS03285;Dbxref=GenBank:WP_000157035.1;Name=WP_000157035.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9F00_RS03285;product=cell division protein DedD;protein_id=WP_000157035.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	4889	5377	.	+	.	ID=gene-C9F00_RS03290;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9F00_RS03290;old_locus_tag=C9F00_03345
NZ_PYKC01000016.1	Protein Homology	CDS	4889	5377	.	+	0	ID=cds-WP_000262102.1;Parent=gene-C9F00_RS03290;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9F00_RS03290;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	5415	6932	.	+	.	ID=gene-C9F00_RS03295;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9F00_RS03295;old_locus_tag=C9F00_03350
NZ_PYKC01000016.1	Protein Homology	CDS	5415	6932	.	+	0	ID=cds-WP_000334205.1;Parent=gene-C9F00_RS03295;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F00_RS03295;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	6968	8395	.	-	.	ID=gene-C9F00_RS03300;Name=C9F00_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03300;old_locus_tag=C9F00_03355
NZ_PYKC01000016.1	Protein Homology	CDS	6968	8395	.	-	0	ID=cds-WP_000168922.1;Parent=gene-C9F00_RS03300;Dbxref=GenBank:WP_000168922.1;Name=WP_000168922.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9F00_RS03300;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168922.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	8606	10003	.	+	.	ID=gene-C9F00_RS03305;Name=C9F00_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03305;old_locus_tag=C9F00_03360
NZ_PYKC01000016.1	Protein Homology	CDS	8606	10003	.	+	0	ID=cds-WP_135492118.1;Parent=gene-C9F00_RS03305;Dbxref=GenBank:WP_135492118.1;Name=WP_135492118.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9F00_RS03305;product=diaminopimelate decarboxylase family protein;protein_id=WP_135492118.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	10094	11515	.	+	.	ID=gene-C9F00_RS03310;Name=C9F00_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03310;old_locus_tag=C9F00_03365
NZ_PYKC01000016.1	Protein Homology	CDS	10094	11515	.	+	0	ID=cds-WP_000072512.1;Parent=gene-C9F00_RS03310;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9F00_RS03310;product=APC family permease;protein_id=WP_000072512.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	11517	12620	.	+	.	ID=gene-C9F00_RS03315;Name=C9F00_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03315;old_locus_tag=C9F00_03370
NZ_PYKC01000016.1	Protein Homology	CDS	11517	12620	.	+	0	ID=cds-WP_000281907.1;Parent=gene-C9F00_RS03315;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9F00_RS03315;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	12684	14090	.	+	.	ID=gene-C9F00_RS03320;Name=C9F00_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03320;old_locus_tag=C9F00_03375
NZ_PYKC01000016.1	Protein Homology	CDS	12684	14090	.	+	0	ID=cds-WP_135492120.1;Parent=gene-C9F00_RS03320;Dbxref=GenBank:WP_135492120.1;Name=WP_135492120.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9F00_RS03320;product=amino acid permease;protein_id=WP_135492120.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	14117	14686	.	+	.	ID=gene-C9F00_RS03325;Name=C9F00_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03325;old_locus_tag=C9F00_03380
NZ_PYKC01000016.1	Protein Homology	CDS	14117	14686	.	+	0	ID=cds-WP_050067770.1;Parent=gene-C9F00_RS03325;Dbxref=GenBank:WP_050067770.1;Name=WP_050067770.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9F00_RS03325;product=UbiX family flavin prenyltransferase;protein_id=WP_050067770.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	14976	15758	.	+	.	ID=gene-C9F00_RS03330;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9F00_RS03330;old_locus_tag=C9F00_03385
NZ_PYKC01000016.1	Protein Homology	CDS	14976	15758	.	+	0	ID=cds-WP_135492122.1;Parent=gene-C9F00_RS03330;Dbxref=GenBank:WP_135492122.1;Name=WP_135492122.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9F00_RS03330;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_135492122.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	15996	16778	.	+	.	ID=gene-C9F00_RS03335;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9F00_RS03335;old_locus_tag=C9F00_03390
NZ_PYKC01000016.1	Protein Homology	CDS	15996	16778	.	+	0	ID=cds-WP_000731868.1;Parent=gene-C9F00_RS03335;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F00_RS03335;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	16959	17645	.	+	.	ID=gene-C9F00_RS03340;Name=C9F00_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03340;old_locus_tag=C9F00_03395
NZ_PYKC01000016.1	Protein Homology	CDS	16959	17645	.	+	0	ID=cds-WP_000965498.1;Parent=gene-C9F00_RS03340;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9F00_RS03340;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	17642	18349	.	+	.	ID=gene-C9F00_RS03345;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9F00_RS03345;old_locus_tag=C9F00_03400
NZ_PYKC01000016.1	Protein Homology	CDS	17642	18349	.	+	0	ID=cds-WP_000569771.1;Parent=gene-C9F00_RS03345;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9F00_RS03345;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	18363	19136	.	+	.	ID=gene-C9F00_RS03350;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9F00_RS03350;old_locus_tag=C9F00_03405
NZ_PYKC01000016.1	Protein Homology	CDS	18363	19136	.	+	0	ID=cds-WP_001293591.1;Parent=gene-C9F00_RS03350;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9F00_RS03350;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	19188	20081	.	-	.	ID=gene-C9F00_RS03355;Name=C9F00_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03355;old_locus_tag=C9F00_03410
NZ_PYKC01000016.1	Protein Homology	CDS	19188	20081	.	-	0	ID=cds-WP_001166274.1;Parent=gene-C9F00_RS03355;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9F00_RS03355;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	20207	20854	.	-	.	ID=gene-C9F00_RS03360;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=C9F00_RS03360;old_locus_tag=C9F00_03415
NZ_PYKC01000016.1	Protein Homology	CDS	20207	20854	.	-	0	ID=cds-WP_097375639.1;Parent=gene-C9F00_RS03360;Dbxref=GenBank:WP_097375639.1;Name=WP_097375639.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9F00_RS03360;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_097375639.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	20997	21641	.	+	.	ID=gene-C9F00_RS03365;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9F00_RS03365;old_locus_tag=C9F00_03420
NZ_PYKC01000016.1	Protein Homology	CDS	20997	21641	.	+	0	ID=cds-WP_000043012.1;Parent=gene-C9F00_RS03365;Dbxref=GenBank:WP_000043012.1;Name=WP_000043012.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9F00_RS03365;product=glutathione transferase;protein_id=WP_000043012.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	21697	22248	.	+	.	ID=gene-C9F00_RS03370;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9F00_RS03370;old_locus_tag=C9F00_03425
NZ_PYKC01000016.1	Protein Homology	CDS	21697	22248	.	+	0	ID=cds-WP_000772458.1;Parent=gene-C9F00_RS03370;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9F00_RS03370;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	22305	22859	.	+	.	ID=gene-C9F00_RS03375;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9F00_RS03375;old_locus_tag=C9F00_03430
NZ_PYKC01000016.1	Protein Homology	CDS	22305	22859	.	+	0	ID=cds-WP_135492124.1;Parent=gene-C9F00_RS03375;Dbxref=GenBank:WP_135492124.1;Name=WP_135492124.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9F00_RS03375;product=NUDIX hydrolase YfcD;protein_id=WP_135492124.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	22865	23884	.	-	.	ID=gene-C9F00_RS03380;Name=C9F00_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03380;old_locus_tag=C9F00_03435
NZ_PYKC01000016.1	Protein Homology	CDS	22865	23884	.	-	0	ID=cds-WP_000026949.1;Parent=gene-C9F00_RS03380;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9F00_RS03380;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	24137	24580	.	+	.	ID=gene-C9F00_RS03390;Name=C9F00_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03390;old_locus_tag=C9F00_03445
NZ_PYKC01000016.1	Protein Homology	CDS	24137	24580	.	+	0	ID=cds-WP_000901813.1;Parent=gene-C9F00_RS03390;Dbxref=GenBank:WP_000901813.1;Name=WP_000901813.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9F00_RS03390;product=PTS sugar transporter subunit IIA;protein_id=WP_000901813.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	24661	24933	.	+	.	ID=gene-C9F00_RS03395;Name=C9F00_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03395;old_locus_tag=C9F00_03450
NZ_PYKC01000016.1	Protein Homology	CDS	24661	24933	.	+	0	ID=cds-WP_000699818.1;Parent=gene-C9F00_RS03395;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9F00_RS03395;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	24954	26345	.	+	.	ID=gene-C9F00_RS03400;Name=C9F00_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03400;old_locus_tag=C9F00_03455
NZ_PYKC01000016.1	Protein Homology	CDS	24954	26345	.	+	0	ID=cds-WP_001518515.1;Parent=gene-C9F00_RS03400;Dbxref=GenBank:WP_001518515.1;Name=WP_001518515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9F00_RS03400;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001518515.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	26342	27172	.	+	.	ID=gene-C9F00_RS03405;Name=C9F00_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03405;old_locus_tag=C9F00_03460
NZ_PYKC01000016.1	Protein Homology	CDS	26342	27172	.	+	0	ID=cds-WP_001103265.1;Parent=gene-C9F00_RS03405;Dbxref=GenBank:WP_001103265.1;Name=WP_001103265.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9F00_RS03405;product=transketolase;protein_id=WP_001103265.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	27165	28118	.	+	.	ID=gene-C9F00_RS03410;Name=C9F00_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03410;old_locus_tag=C9F00_03465
NZ_PYKC01000016.1	Protein Homology	CDS	27165	28118	.	+	0	ID=cds-WP_000593018.1;Parent=gene-C9F00_RS03410;Dbxref=GenBank:WP_000593018.1;Name=WP_000593018.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9F00_RS03410;product=transketolase family protein;protein_id=WP_000593018.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	28167	29687	.	-	.	ID=gene-C9F00_RS03415;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9F00_RS03415;old_locus_tag=C9F00_03470
NZ_PYKC01000016.1	Protein Homology	CDS	28167	29687	.	-	0	ID=cds-WP_000117932.1;Parent=gene-C9F00_RS03415;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9F00_RS03415;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	29905	32049	.	-	.	ID=gene-C9F00_RS03420;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9F00_RS03420;old_locus_tag=C9F00_03475
NZ_PYKC01000016.1	Protein Homology	CDS	29905	32049	.	-	0	ID=cds-WP_000086692.1;Parent=gene-C9F00_RS03420;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9F00_RS03420;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	32126	33328	.	-	.	ID=gene-C9F00_RS03425;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9F00_RS03425;old_locus_tag=C9F00_03480
NZ_PYKC01000016.1	Protein Homology	CDS	32126	33328	.	-	0	ID=cds-WP_000095689.1;Parent=gene-C9F00_RS03425;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9F00_RS03425;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	33668	34123	.	+	.	ID=gene-C9F00_RS03435;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9F00_RS03435;old_locus_tag=C9F00_03485
NZ_PYKC01000016.1	Protein Homology	CDS	33668	34123	.	+	0	ID=cds-WP_000106617.1;Parent=gene-C9F00_RS03435;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9F00_RS03435;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	34206	34700	.	+	.	ID=gene-C9F00_RS03440;Name=C9F00_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03440;old_locus_tag=C9F00_03490
NZ_PYKC01000016.1	Protein Homology	CDS	34206	34700	.	+	0	ID=cds-WP_000426135.1;Parent=gene-C9F00_RS03440;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9F00_RS03440;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	34693	35370	.	+	.	ID=gene-C9F00_RS03445;Name=C9F00_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03445;old_locus_tag=C9F00_03495
NZ_PYKC01000016.1	Protein Homology	CDS	34693	35370	.	+	0	ID=cds-WP_001555201.1;Parent=gene-C9F00_RS03445;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9F00_RS03445;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	35447	37273	.	+	.	ID=gene-C9F00_RS03450;Name=C9F00_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03450;old_locus_tag=C9F00_03500
NZ_PYKC01000016.1	Protein Homology	CDS	35447	37273	.	+	0	ID=cds-WP_001012857.1;Parent=gene-C9F00_RS03450;Dbxref=GenBank:WP_001012857.1;Name=WP_001012857.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F00_RS03450;product=SLC13 family permease;protein_id=WP_001012857.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	37365	37964	.	-	.	ID=gene-C9F00_RS03460;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9F00_RS03460;old_locus_tag=C9F00_03505
NZ_PYKC01000016.1	Protein Homology	CDS	37365	37964	.	-	0	ID=cds-WP_000813882.1;Parent=gene-C9F00_RS03460;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9F00_RS03460;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	38058	39272	.	-	.	ID=gene-C9F00_RS03465;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9F00_RS03465;old_locus_tag=C9F00_03510
NZ_PYKC01000016.1	Protein Homology	CDS	38058	39272	.	-	0	ID=cds-WP_000074540.1;Parent=gene-C9F00_RS03465;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9F00_RS03465;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	40205	41143	.	+	.	ID=gene-C9F00_RS03475;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9F00_RS03475;old_locus_tag=C9F00_03520
NZ_PYKC01000016.1	Protein Homology	CDS	40205	41143	.	+	0	ID=cds-WP_000606288.1;Parent=gene-C9F00_RS03475;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9F00_RS03475;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	41223	41375	.	+	.	ID=gene-C9F00_RS03480;Name=C9F00_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03480;old_locus_tag=C9F00_03525
NZ_PYKC01000016.1	Protein Homology	CDS	41223	41375	.	+	0	ID=cds-WP_001522276.1;Parent=gene-C9F00_RS03480;Dbxref=GenBank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9F00_RS03480;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001522276.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	41770	42213	.	+	.	ID=gene-C9F00_RS03485;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9F00_RS03485;old_locus_tag=C9F00_03530
NZ_PYKC01000016.1	Protein Homology	CDS	41770	42213	.	+	0	ID=cds-WP_000062993.1;Parent=gene-C9F00_RS03485;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9F00_RS03485;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	42229	42891	.	+	.	ID=gene-C9F00_RS03490;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9F00_RS03490;old_locus_tag=C9F00_03535
NZ_PYKC01000016.1	Protein Homology	CDS	42229	42891	.	+	0	ID=cds-WP_000386728.1;Parent=gene-C9F00_RS03490;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9F00_RS03490;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	42978	44780	.	+	.	ID=gene-C9F00_RS03495;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9F00_RS03495;old_locus_tag=C9F00_03540
NZ_PYKC01000016.1	Protein Homology	CDS	42978	44780	.	+	0	ID=cds-WP_000247855.1;Parent=gene-C9F00_RS03495;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9F00_RS03495;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	44783	45283	.	+	.	ID=gene-C9F00_RS03500;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9F00_RS03500;old_locus_tag=C9F00_03545
NZ_PYKC01000016.1	Protein Homology	CDS	44783	45283	.	+	0	ID=cds-WP_000545038.1;Parent=gene-C9F00_RS03500;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9F00_RS03500;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	45280	46617	.	+	.	ID=gene-C9F00_RS03505;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=C9F00_RS03505;old_locus_tag=C9F00_03550
NZ_PYKC01000016.1	Protein Homology	CDS	45280	46617	.	+	0	ID=cds-WP_000800048.1;Parent=gene-C9F00_RS03505;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9F00_RS03505;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	46648	49374	.	+	.	ID=gene-C9F00_RS03510;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=C9F00_RS03510;old_locus_tag=C9F00_03555
NZ_PYKC01000016.1	Protein Homology	CDS	46648	49374	.	+	0	ID=cds-WP_001728014.1;Parent=gene-C9F00_RS03510;Dbxref=GenBank:WP_001728014.1;Name=WP_001728014.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9F00_RS03510;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001728014.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	49371	50348	.	+	.	ID=gene-C9F00_RS03515;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9F00_RS03515;old_locus_tag=C9F00_03560
NZ_PYKC01000016.1	Protein Homology	CDS	49371	50348	.	+	0	ID=cds-WP_000118515.1;Parent=gene-C9F00_RS03515;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F00_RS03515;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	50363	50905	.	+	.	ID=gene-C9F00_RS03520;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9F00_RS03520;old_locus_tag=C9F00_03565
NZ_PYKC01000016.1	Protein Homology	CDS	50363	50905	.	+	0	ID=cds-WP_000172747.1;Parent=gene-C9F00_RS03520;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9F00_RS03520;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	50916	51470	.	+	.	ID=gene-C9F00_RS03525;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9F00_RS03525;old_locus_tag=C9F00_03570
NZ_PYKC01000016.1	Protein Homology	CDS	50916	51470	.	+	0	ID=cds-WP_000393522.1;Parent=gene-C9F00_RS03525;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9F00_RS03525;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	51467	51769	.	+	.	ID=gene-C9F00_RS03530;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9F00_RS03530;old_locus_tag=C9F00_03575
NZ_PYKC01000016.1	Protein Homology	CDS	51467	51769	.	+	0	ID=cds-WP_000612687.1;Parent=gene-C9F00_RS03530;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9F00_RS03530;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	51766	53607	.	+	.	ID=gene-C9F00_RS03535;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9F00_RS03535;old_locus_tag=C9F00_03580
NZ_PYKC01000016.1	Protein Homology	CDS	51766	53607	.	+	0	ID=cds-WP_135492126.1;Parent=gene-C9F00_RS03535;Dbxref=GenBank:WP_135492126.1;Name=WP_135492126.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9F00_RS03535;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_135492126.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	53684	55213	.	+	.	ID=gene-C9F00_RS03540;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9F00_RS03540;old_locus_tag=C9F00_03585
NZ_PYKC01000016.1	Protein Homology	CDS	53684	55213	.	+	0	ID=cds-WP_000926428.1;Parent=gene-C9F00_RS03540;Dbxref=GenBank:WP_000926428.1;Name=WP_000926428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F00_RS03540;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926428.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	55220	56677	.	+	.	ID=gene-C9F00_RS03545;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=C9F00_RS03545;old_locus_tag=C9F00_03590
NZ_PYKC01000016.1	Protein Homology	CDS	55220	56677	.	+	0	ID=cds-WP_000156667.1;Parent=gene-C9F00_RS03545;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F00_RS03545;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11
NZ_PYKC01000016.1	RefSeq	gene	57286	60655	.	+	.	ID=gene-C9F00_RS03550;Name=C9F00_RS03550;end_range=60655,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03550;old_locus_tag=C9F00_03595;partial=true
NZ_PYKC01000016.1	Protein Homology	CDS	57286	60655	.	+	0	ID=cds-WP_210114156.1;Parent=gene-C9F00_RS03550;Dbxref=GenBank:WP_210114156.1;Name=WP_210114156.1;end_range=60655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F00_RS03550;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210114156.1;transl_table=11
##sequence-region NZ_PYKC01000156.1 1 736
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000156.1	RefSeq	region	1	736	.	+	.	ID=NZ_PYKC01000156.1:1..736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000156.1	RefSeq	gene	99	467	.	-	.	ID=gene-C9F00_RS24900;Name=C9F00_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24900
NZ_PYKC01000156.1	Protein Homology	CDS	99	467	.	-	0	ID=cds-WP_210114168.1;Parent=gene-C9F00_RS24900;Dbxref=GenBank:WP_210114168.1;Name=WP_210114168.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012385.6;locus_tag=C9F00_RS24900;product=sigma 54-interacting transcriptional regulator;protein_id=WP_210114168.1;transl_table=11
NZ_PYKC01000156.1	RefSeq	gene	466	720	.	+	.	ID=gene-C9F00_RS24905;Name=C9F00_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24905
NZ_PYKC01000156.1	Protein Homology	CDS	466	720	.	+	0	ID=cds-WP_432430822.1;Parent=gene-C9F00_RS24905;Dbxref=GenBank:WP_432430822.1;Name=WP_432430822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019879.6;locus_tag=C9F00_RS24905;product=hypothetical protein;protein_id=WP_432430822.1;transl_table=11
##sequence-region NZ_PYKC01000112.1 1 57798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000112.1	RefSeq	region	1	57798	.	+	.	ID=NZ_PYKC01000112.1:1..57798;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000112.1	RefSeq	gene	1	887	.	-	.	ID=gene-C9F00_RS17415;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9F00_RS17415;old_locus_tag=C9F00_17855;partial=true;start_range=.,1
NZ_PYKC01000112.1	Protein Homology	CDS	1	887	.	-	0	ID=cds-WP_135492414.1;Parent=gene-C9F00_RS17415;Dbxref=GenBank:WP_135492414.1;Name=WP_135492414.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9F00_RS17415;partial=true;product=phage shock protein operon transcriptional activator;protein_id=WP_135492414.1;start_range=.,1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	1058	1726	.	+	.	ID=gene-C9F00_RS17420;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9F00_RS17420;old_locus_tag=C9F00_17860
NZ_PYKC01000112.1	Protein Homology	CDS	1058	1726	.	+	0	ID=cds-WP_135492416.1;Parent=gene-C9F00_RS17420;Dbxref=GenBank:WP_135492416.1;Name=WP_135492416.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9F00_RS17420;product=phage shock protein PspA;protein_id=WP_135492416.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	1786	2010	.	+	.	ID=gene-C9F00_RS17425;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9F00_RS17425;old_locus_tag=C9F00_17865
NZ_PYKC01000112.1	Protein Homology	CDS	1786	2010	.	+	0	ID=cds-WP_001274953.1;Parent=gene-C9F00_RS17425;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9F00_RS17425;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	2010	2369	.	+	.	ID=gene-C9F00_RS17430;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9F00_RS17430;old_locus_tag=C9F00_17870
NZ_PYKC01000112.1	Protein Homology	CDS	2010	2369	.	+	0	ID=cds-WP_000508938.1;Parent=gene-C9F00_RS17430;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9F00_RS17430;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	2392	2610	.	+	.	ID=gene-C9F00_RS17435;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9F00_RS17435;old_locus_tag=C9F00_17875
NZ_PYKC01000112.1	Protein Homology	CDS	2392	2610	.	+	0	ID=cds-WP_001097607.1;Parent=gene-C9F00_RS17435;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9F00_RS17435;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	2686	3000	.	+	.	ID=gene-C9F00_RS17440;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9F00_RS17440;old_locus_tag=C9F00_17880
NZ_PYKC01000112.1	Protein Homology	CDS	2686	3000	.	+	0	ID=cds-WP_000913428.1;Parent=gene-C9F00_RS17440;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9F00_RS17440;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	3149	4546	.	+	.	ID=gene-C9F00_RS17445;Name=C9F00_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17445;old_locus_tag=C9F00_17885
NZ_PYKC01000112.1	Protein Homology	CDS	3149	4546	.	+	0	ID=cds-WP_050067638.1;Parent=gene-C9F00_RS17445;Dbxref=GenBank:WP_050067638.1;Name=WP_050067638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9F00_RS17445;product=YcjX family protein;protein_id=WP_050067638.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	4543	5604	.	+	.	ID=gene-C9F00_RS17450;Name=C9F00_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17450;old_locus_tag=C9F00_17890
NZ_PYKC01000112.1	Protein Homology	CDS	4543	5604	.	+	0	ID=cds-WP_126479039.1;Parent=gene-C9F00_RS17450;Dbxref=GenBank:WP_126479039.1;Name=WP_126479039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9F00_RS17450;product=YcjF family protein;protein_id=WP_126479039.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	5752	7293	.	+	.	ID=gene-C9F00_RS17455;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9F00_RS17455;old_locus_tag=C9F00_17895
NZ_PYKC01000112.1	Protein Homology	CDS	5752	7293	.	+	0	ID=cds-WP_135369772.1;Parent=gene-C9F00_RS17455;Dbxref=GenBank:WP_135369772.1;Name=WP_135369772.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9F00_RS17455;product=transcriptional regulator TyrR;protein_id=WP_135369772.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	7383	7889	.	-	.	ID=gene-C9F00_RS17460;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9F00_RS17460;old_locus_tag=C9F00_17900
NZ_PYKC01000112.1	Protein Homology	CDS	7383	7889	.	-	0	ID=cds-WP_000084401.1;Parent=gene-C9F00_RS17460;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9F00_RS17460;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	8005	8970	.	+	.	ID=gene-C9F00_RS17465;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9F00_RS17465;old_locus_tag=C9F00_17905
NZ_PYKC01000112.1	Protein Homology	CDS	8005	8970	.	+	0	ID=cds-WP_080222203.1;Parent=gene-C9F00_RS17465;Dbxref=GenBank:WP_080222203.1;Name=WP_080222203.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9F00_RS17465;product=L-Ala-D/L-Glu epimerase;protein_id=WP_080222203.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	8945	9673	.	-	.	ID=gene-C9F00_RS17470;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9F00_RS17470;old_locus_tag=C9F00_17910
NZ_PYKC01000112.1	Protein Homology	CDS	8945	9673	.	-	0	ID=cds-WP_000219108.1;Parent=gene-C9F00_RS17470;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9F00_RS17470;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	9863	11476	.	+	.	ID=gene-C9F00_RS17475;Name=C9F00_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17475;old_locus_tag=C9F00_17915
NZ_PYKC01000112.1	Protein Homology	CDS	9863	11476	.	+	0	ID=cds-WP_001216563.1;Parent=gene-C9F00_RS17475;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9F00_RS17475;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	11696	12040	.	-	.	ID=gene-C9F00_RS17480;Name=C9F00_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17480;old_locus_tag=C9F00_17920
NZ_PYKC01000112.1	Protein Homology	CDS	11696	12040	.	-	0	ID=cds-WP_000950635.1;Parent=gene-C9F00_RS17480;Dbxref=GenBank:WP_000950635.1;Name=WP_000950635.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=C9F00_RS17480;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000950635.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	12075	12356	.	-	.	ID=gene-C9F00_RS17485;Name=C9F00_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17485;old_locus_tag=C9F00_17925
NZ_PYKC01000112.1	Protein Homology	CDS	12075	12356	.	-	0	ID=cds-WP_000323820.1;Parent=gene-C9F00_RS17485;Dbxref=GenBank:WP_000323820.1;Name=WP_000323820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=C9F00_RS17485;product=hypothetical protein;protein_id=WP_000323820.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	12709	13632	.	-	.	ID=gene-C9F00_RS17495;Name=C9F00_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17495;old_locus_tag=C9F00_17935
NZ_PYKC01000112.1	Protein Homology	CDS	12709	13632	.	-	0	ID=cds-WP_001257182.1;Parent=gene-C9F00_RS17495;Dbxref=GenBank:WP_001257182.1;Name=WP_001257182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=C9F00_RS17495;product=LysR substrate-binding domain-containing protein;protein_id=WP_001257182.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	13884	14825	.	+	.	ID=gene-C9F00_RS17500;Name=C9F00_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17500;old_locus_tag=C9F00_17940
NZ_PYKC01000112.1	Protein Homology	CDS	13884	14825	.	+	0	ID=cds-WP_001537910.1;Parent=gene-C9F00_RS17500;Dbxref=GenBank:WP_001537910.1;Name=WP_001537910.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537910.1;locus_tag=C9F00_RS17500;product=LysR family transcriptional regulator;protein_id=WP_001537910.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	15143	15529	.	+	.	ID=gene-C9F00_RS17505;Name=C9F00_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17505;old_locus_tag=C9F00_17945
NZ_PYKC01000112.1	Protein Homology	CDS	15143	15529	.	+	0	ID=cds-WP_000864437.1;Parent=gene-C9F00_RS17505;Dbxref=GenBank:WP_000864437.1;Name=WP_000864437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864437.1;locus_tag=C9F00_RS17505;product=RidA family protein;protein_id=WP_000864437.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	15614	16888	.	+	.	ID=gene-C9F00_RS17510;Name=C9F00_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17510;old_locus_tag=C9F00_17950
NZ_PYKC01000112.1	Protein Homology	CDS	15614	16888	.	+	0	ID=cds-WP_167850413.1;Parent=gene-C9F00_RS17510;Dbxref=GenBank:WP_167850413.1;Name=WP_167850413.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295225.1;locus_tag=C9F00_RS17510;product=amino acid permease;protein_id=WP_167850413.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	16915	18096	.	+	.	ID=gene-C9F00_RS17515;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9F00_RS17515;old_locus_tag=C9F00_17955
NZ_PYKC01000112.1	Protein Homology	CDS	16915	18096	.	+	0	ID=cds-WP_001066156.1;Parent=gene-C9F00_RS17515;Dbxref=GenBank:WP_001066156.1;Name=WP_001066156.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066156.1;locus_tag=C9F00_RS17515;product=cystathionine beta-lyase;protein_id=WP_001066156.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	18584	19513	.	-	.	ID=gene-C9F00_RS17520;Name=C9F00_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17520;old_locus_tag=C9F00_17960
NZ_PYKC01000112.1	Protein Homology	CDS	18584	19513	.	-	0	ID=cds-WP_135369576.1;Parent=gene-C9F00_RS17520;Dbxref=GenBank:WP_135369576.1;Name=WP_135369576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9F00_RS17520;product=aromatic alcohol reductase;protein_id=WP_135369576.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	19632	20537	.	+	.	ID=gene-C9F00_RS17525;Name=C9F00_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17525;old_locus_tag=C9F00_17965
NZ_PYKC01000112.1	Protein Homology	CDS	19632	20537	.	+	0	ID=cds-WP_135369575.1;Parent=gene-C9F00_RS17525;Dbxref=GenBank:WP_135369575.1;Name=WP_135369575.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9F00_RS17525;product=LysR family transcriptional regulator;protein_id=WP_135369575.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	20814	21683	.	+	.	ID=gene-C9F00_RS17530;Name=C9F00_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17530;old_locus_tag=C9F00_17970
NZ_PYKC01000112.1	Protein Homology	CDS	20814	21683	.	+	0	ID=cds-WP_000456775.1;Parent=gene-C9F00_RS17530;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9F00_RS17530;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	21774	22487	.	-	.	ID=gene-C9F00_RS17535;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9F00_RS17535;old_locus_tag=C9F00_17975
NZ_PYKC01000112.1	Protein Homology	CDS	21774	22487	.	-	0	ID=cds-WP_000979084.1;Parent=gene-C9F00_RS17535;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9F00_RS17535;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	22565	23155	.	+	.	ID=gene-C9F00_RS17540;Name=C9F00_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17540;old_locus_tag=C9F00_17980
NZ_PYKC01000112.1	Protein Homology	CDS	22565	23155	.	+	0	ID=cds-WP_000208474.1;Parent=gene-C9F00_RS17540;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9F00_RS17540;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	23284	23520	.	+	.	ID=gene-C9F00_RS17545;Name=C9F00_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17545;old_locus_tag=C9F00_17985
NZ_PYKC01000112.1	Protein Homology	CDS	23284	23520	.	+	0	ID=cds-WP_001168016.1;Parent=gene-C9F00_RS17545;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9F00_RS17545;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	23734	24843	.	-	.	ID=gene-C9F00_RS17550;Name=C9F00_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17550;old_locus_tag=C9F00_17990
NZ_PYKC01000112.1	Protein Homology	CDS	23734	24843	.	-	0	ID=cds-WP_135369577.1;Parent=gene-C9F00_RS17550;Dbxref=GenBank:WP_135369577.1;Name=WP_135369577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9F00_RS17550;product=hypothetical protein;protein_id=WP_135369577.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	25235	26092	.	-	.	ID=gene-C9F00_RS17555;Name=C9F00_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17555;old_locus_tag=C9F00_17995
NZ_PYKC01000112.1	Protein Homology	CDS	25235	26092	.	-	0	ID=cds-WP_010989022.1;Parent=gene-C9F00_RS17555;Dbxref=GenBank:WP_010989022.1;Name=WP_010989022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9F00_RS17555;product=GyrI-like domain-containing protein;protein_id=WP_010989022.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	26389	27234	.	+	.	ID=gene-C9F00_RS17560;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9F00_RS17560;old_locus_tag=C9F00_18000
NZ_PYKC01000112.1	Protein Homology	CDS	26389	27234	.	+	0	ID=cds-WP_135420045.1;Parent=gene-C9F00_RS17560;Dbxref=GenBank:WP_135420045.1;Name=WP_135420045.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9F00_RS17560;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_135420045.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	27309	29291	.	+	.	ID=gene-C9F00_RS17565;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9F00_RS17565;old_locus_tag=C9F00_18005
NZ_PYKC01000112.1	Protein Homology	CDS	27309	29291	.	+	0	ID=cds-WP_135369382.1;Parent=gene-C9F00_RS17565;Dbxref=GenBank:WP_135369382.1;Name=WP_135369382.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F00_RS17565;product=two-partner secretion translocator ZirT;protein_id=WP_135369382.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	29318	30148	.	+	.	ID=gene-C9F00_RS17570;Name=C9F00_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17570;old_locus_tag=C9F00_18010
NZ_PYKC01000112.1	Protein Homology	CDS	29318	30148	.	+	0	ID=cds-WP_031605286.1;Parent=gene-C9F00_RS17570;Dbxref=GenBank:WP_031605286.1;Name=WP_031605286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531580.1;locus_tag=C9F00_RS17570;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_031605286.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	30151	30669	.	+	.	ID=gene-C9F00_RS17575;Name=C9F00_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17575;old_locus_tag=C9F00_18015
NZ_PYKC01000112.1	Protein Homology	CDS	30151	30669	.	+	0	ID=cds-WP_135369381.1;Parent=gene-C9F00_RS17575;Dbxref=GenBank:WP_135369381.1;Name=WP_135369381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530156.1;locus_tag=C9F00_RS17575;product=redoxin family protein;protein_id=WP_135369381.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	30776	31114	.	-	.	ID=gene-C9F00_RS17580;Name=C9F00_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17580;old_locus_tag=C9F00_18020
NZ_PYKC01000112.1	Protein Homology	CDS	30776	31114	.	-	0	ID=cds-WP_000051812.1;Parent=gene-C9F00_RS17580;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9F00_RS17580;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	31142	31828	.	-	.	ID=gene-C9F00_RS17585;Name=C9F00_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17585;old_locus_tag=C9F00_18025
NZ_PYKC01000112.1	Protein Homology	CDS	31142	31828	.	-	0	ID=cds-WP_000097247.1;Parent=gene-C9F00_RS17585;Dbxref=GenBank:WP_000097247.1;Name=WP_000097247.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9F00_RS17585;product=B3/B4 domain-containing protein;protein_id=WP_000097247.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	31872	32474	.	+	.	ID=gene-C9F00_RS17590;Name=C9F00_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17590;old_locus_tag=C9F00_18030
NZ_PYKC01000112.1	Protein Homology	CDS	31872	32474	.	+	0	ID=cds-WP_000163371.1;Parent=gene-C9F00_RS17590;Dbxref=GenBank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9F00_RS17590;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	32556	33587	.	-	.	ID=gene-C9F00_RS17595;Name=C9F00_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17595;old_locus_tag=C9F00_18035
NZ_PYKC01000112.1	Protein Homology	CDS	32556	33587	.	-	0	ID=cds-WP_000493672.1;Parent=gene-C9F00_RS17595;Dbxref=GenBank:WP_000493672.1;Name=WP_000493672.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9F00_RS17595;product=mechanosensitive ion channel family protein;protein_id=WP_000493672.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	33826	34080	.	+	.	ID=gene-C9F00_RS17600;Name=C9F00_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17600;old_locus_tag=C9F00_18040
NZ_PYKC01000112.1	Protein Homology	CDS	33826	34080	.	+	0	ID=cds-WP_000605645.1;Parent=gene-C9F00_RS17600;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9F00_RS17600;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	34135	35082	.	-	.	ID=gene-C9F00_RS17605;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9F00_RS17605;old_locus_tag=C9F00_18045
NZ_PYKC01000112.1	Protein Homology	CDS	34135	35082	.	-	0	ID=cds-WP_001262138.1;Parent=gene-C9F00_RS17605;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9F00_RS17605;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	35233	35985	.	-	.	ID=gene-C9F00_RS17610;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9F00_RS17610;old_locus_tag=C9F00_18050
NZ_PYKC01000112.1	Protein Homology	CDS	35233	35985	.	-	0	ID=cds-WP_000611914.1;Parent=gene-C9F00_RS17610;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9F00_RS17610;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	36181	36696	.	-	.	ID=gene-C9F00_RS17615;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=C9F00_RS17615;old_locus_tag=C9F00_18055
NZ_PYKC01000112.1	Protein Homology	CDS	36181	36696	.	-	0	ID=cds-WP_000945037.1;Parent=gene-C9F00_RS17615;Dbxref=GenBank:WP_000945037.1;Name=WP_000945037.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9F00_RS17615;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945037.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	36954	37517	.	+	.	ID=gene-C9F00_RS17620;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9F00_RS17620;old_locus_tag=C9F00_18060
NZ_PYKC01000112.1	Protein Homology	CDS	36954	37517	.	+	0	ID=cds-WP_001046799.1;Parent=gene-C9F00_RS17620;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9F00_RS17620;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	37910	39064	.	+	.	ID=gene-C9F00_RS17625;Name=C9F00_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17625;old_locus_tag=C9F00_18065
NZ_PYKC01000112.1	Protein Homology	CDS	37910	39064	.	+	0	ID=cds-WP_135369380.1;Parent=gene-C9F00_RS17625;Dbxref=GenBank:WP_135369380.1;Name=WP_135369380.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210139.1;locus_tag=C9F00_RS17625;product=methyl-accepting chemotaxis protein;protein_id=WP_135369380.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	39210	40193	.	+	.	ID=gene-C9F00_RS17630;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9F00_RS17630;old_locus_tag=C9F00_18070
NZ_PYKC01000112.1	Protein Homology	CDS	39210	40193	.	+	0	ID=cds-WP_000387373.1;Parent=gene-C9F00_RS17630;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9F00_RS17630;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	40469	40651	.	+	.	ID=gene-C9F00_RS24875;Name=C9F00_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24875;old_locus_tag=C9F00_18075
NZ_PYKC01000112.1	Protein Homology	CDS	40469	40651	.	+	0	ID=cds-WP_001750081.1;Parent=gene-C9F00_RS24875;Dbxref=GenBank:WP_001750081.1;Name=WP_001750081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=C9F00_RS24875;product=hypothetical protein;protein_id=WP_001750081.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	40680	42053	.	+	.	ID=gene-C9F00_RS17640;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9F00_RS17640;old_locus_tag=C9F00_18080
NZ_PYKC01000112.1	Protein Homology	CDS	40680	42053	.	+	0	ID=cds-WP_000123688.1;Parent=gene-C9F00_RS17640;Dbxref=GenBank:WP_000123688.1;Name=WP_000123688.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F00_RS17640;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123688.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	42097	43032	.	-	.	ID=gene-C9F00_RS17645;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9F00_RS17645;old_locus_tag=C9F00_18085
NZ_PYKC01000112.1	Protein Homology	CDS	42097	43032	.	-	0	ID=cds-WP_135369379.1;Parent=gene-C9F00_RS17645;Dbxref=GenBank:WP_135369379.1;Name=WP_135369379.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9F00_RS17645;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_135369379.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	pseudogene	43138	43290	.	-	.	ID=gene-C9F00_RS17650;Name=C9F00_RS17650;end_range=43290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17650;old_locus_tag=C9F00_18090;partial=true;pseudo=true
NZ_PYKC01000112.1	Protein Homology	CDS	43138	43290	.	-	0	ID=cds-C9F00_RS17650;Parent=gene-C9F00_RS17650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=43290,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9F00_RS17650;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	43719	47141	.	+	.	ID=gene-C9F00_RS17655;Name=C9F00_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17655;old_locus_tag=C9F00_18095
NZ_PYKC01000112.1	Protein Homology	CDS	43719	47141	.	+	0	ID=cds-WP_135420043.1;Parent=gene-C9F00_RS17655;Dbxref=GenBank:WP_135420043.1;Name=WP_135420043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9F00_RS17655;product=DUF4765 family protein;protein_id=WP_135420043.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	47415	47753	.	+	.	ID=gene-C9F00_RS17660;Name=C9F00_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17660;old_locus_tag=C9F00_18100
NZ_PYKC01000112.1	Protein Homology	CDS	47415	47753	.	+	0	ID=cds-WP_000159242.1;Parent=gene-C9F00_RS17660;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9F00_RS17660;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	47803	48237	.	-	.	ID=gene-C9F00_RS17665;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9F00_RS17665;old_locus_tag=C9F00_18105
NZ_PYKC01000112.1	Protein Homology	CDS	47803	48237	.	-	0	ID=cds-WP_001082296.1;Parent=gene-C9F00_RS17665;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9F00_RS17665;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	48719	52243	.	-	.	ID=gene-C9F00_RS17670;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9F00_RS17670;old_locus_tag=C9F00_18115
NZ_PYKC01000112.1	Protein Homology	CDS	48719	52243	.	-	0	ID=cds-WP_135420041.1;Parent=gene-C9F00_RS17670;Dbxref=GenBank:WP_135420041.1;Name=WP_135420041.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9F00_RS17670;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_135420041.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	52304	52603	.	-	.	ID=gene-C9F00_RS17675;Name=C9F00_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17675;old_locus_tag=C9F00_18120
NZ_PYKC01000112.1	Protein Homology	CDS	52304	52603	.	-	0	ID=cds-WP_031607555.1;Parent=gene-C9F00_RS17675;Dbxref=GenBank:WP_031607555.1;Name=WP_031607555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9F00_RS17675;product=hypothetical protein;protein_id=WP_031607555.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	52519	52785	.	+	.	ID=gene-C9F00_RS17680;Name=C9F00_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17680;old_locus_tag=C9F00_18125
NZ_PYKC01000112.1	Protein Homology	CDS	52519	52785	.	+	0	ID=cds-WP_001200679.1;Parent=gene-C9F00_RS17680;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9F00_RS17680;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	52829	53239	.	-	.	ID=gene-C9F00_RS17685;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9F00_RS17685;old_locus_tag=C9F00_18130
NZ_PYKC01000112.1	Protein Homology	CDS	52829	53239	.	-	0	ID=cds-WP_000725242.1;Parent=gene-C9F00_RS17685;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9F00_RS17685;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	53350	54339	.	-	.	ID=gene-C9F00_RS17690;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9F00_RS17690;old_locus_tag=C9F00_18135
NZ_PYKC01000112.1	Protein Homology	CDS	53350	54339	.	-	0	ID=cds-WP_000762206.1;Parent=gene-C9F00_RS17690;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9F00_RS17690;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	54579	57215	.	+	.	ID=gene-C9F00_RS17695;Name=C9F00_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17695;old_locus_tag=C9F00_18140
NZ_PYKC01000112.1	Protein Homology	CDS	54579	57215	.	+	0	ID=cds-WP_135369746.1;Parent=gene-C9F00_RS17695;Dbxref=GenBank:WP_135369746.1;Name=WP_135369746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9F00_RS17695;product=YdbH family protein;protein_id=WP_135369746.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	57215	57406	.	+	.	ID=gene-C9F00_RS17700;Name=C9F00_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17700;old_locus_tag=C9F00_18145
NZ_PYKC01000112.1	Protein Homology	CDS	57215	57406	.	+	0	ID=cds-WP_000784063.1;Parent=gene-C9F00_RS17700;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9F00_RS17700;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11
NZ_PYKC01000112.1	RefSeq	gene	57414	57737	.	+	.	ID=gene-C9F00_RS17705;Name=C9F00_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17705;old_locus_tag=C9F00_18150
NZ_PYKC01000112.1	Protein Homology	CDS	57414	57737	.	+	0	ID=cds-WP_050067624.1;Parent=gene-C9F00_RS17705;Dbxref=GenBank:WP_050067624.1;Name=WP_050067624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9F00_RS17705;product=YdbL family protein;protein_id=WP_050067624.1;transl_table=11
##sequence-region NZ_PYKC01000001.1 1 55166
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000001.1	RefSeq	region	1	55166	.	+	.	ID=NZ_PYKC01000001.1:1..55166;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000001.1	RefSeq	gene	174	2048	.	-	.	ID=gene-C9F00_RS00005;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9F00_RS00005;old_locus_tag=C9F00_00005
NZ_PYKC01000001.1	Protein Homology	CDS	174	2048	.	-	0	ID=cds-WP_135492074.1;Parent=gene-C9F00_RS00005;Dbxref=GenBank:WP_135492074.1;Name=WP_135492074.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F00_RS00005;product=molecular chaperone HtpG;protein_id=WP_135492074.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	2159	2764	.	-	.	ID=gene-C9F00_RS00010;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9F00_RS00010;old_locus_tag=C9F00_00010
NZ_PYKC01000001.1	Protein Homology	CDS	2159	2764	.	-	0	ID=cds-WP_001195023.1;Parent=gene-C9F00_RS00010;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9F00_RS00010;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	2764	3093	.	-	.	ID=gene-C9F00_RS00015;Name=C9F00_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00015;old_locus_tag=C9F00_00015
NZ_PYKC01000001.1	Protein Homology	CDS	2764	3093	.	-	0	ID=cds-WP_000467098.1;Parent=gene-C9F00_RS00015;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9F00_RS00015;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	3139	5067	.	-	.	ID=gene-C9F00_RS00020;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=C9F00_RS00020;old_locus_tag=C9F00_00020
NZ_PYKC01000001.1	Protein Homology	CDS	3139	5067	.	-	0	ID=cds-WP_000121967.1;Parent=gene-C9F00_RS00020;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9F00_RS00020;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11
NZ_PYKC01000001.1	cmsearch	sequence_feature	3742	3806	.	-	.	ID=id-C9F00_RS00020;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS00020
NZ_PYKC01000001.1	RefSeq	gene	5181	5732	.	-	.	ID=gene-C9F00_RS00025;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9F00_RS00025;old_locus_tag=C9F00_00025
NZ_PYKC01000001.1	Protein Homology	CDS	5181	5732	.	-	0	ID=cds-WP_000127350.1;Parent=gene-C9F00_RS00025;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9F00_RS00025;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	5885	6262	.	-	.	ID=gene-C9F00_RS00030;Name=C9F00_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00030;old_locus_tag=C9F00_00035
NZ_PYKC01000001.1	Protein Homology	CDS	5885	6262	.	-	0	ID=cds-WP_001189863.1;Parent=gene-C9F00_RS00030;Dbxref=GenBank:WP_001189863.1;Name=WP_001189863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9F00_RS00030;product=DUF454 family protein;protein_id=WP_001189863.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	6331	6858	.	+	.	ID=gene-C9F00_RS00035;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9F00_RS00035;old_locus_tag=C9F00_00040
NZ_PYKC01000001.1	Protein Homology	CDS	6331	6858	.	+	0	ID=cds-WP_001519637.1;Parent=gene-C9F00_RS00035;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9F00_RS00035;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	6872	7039	.	+	.	ID=gene-C9F00_RS00040;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=C9F00_RS00040;old_locus_tag=C9F00_00045
NZ_PYKC01000001.1	Protein Homology	CDS	6872	7039	.	+	0	ID=cds-WP_000051161.1;Parent=gene-C9F00_RS00040;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9F00_RS00040;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	pseudogene	7109	7552	.	+	.	ID=gene-C9F00_RS24630;Name=C9F00_RS24630;end_range=7552,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24630;old_locus_tag=C9F00_00050;partial=true;pseudo=true
NZ_PYKC01000001.1	Protein Homology	CDS	7109	7552	.	+	0	ID=cds-C9F00_RS24630;Parent=gene-C9F00_RS24630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;end_range=7552,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225492.1;locus_tag=C9F00_RS24630;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
NZ_PYKC01000001.1	RefSeq	pseudogene	7678	8169	.	+	.	ID=gene-C9F00_RS24635;Name=C9F00_RS24635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24635;old_locus_tag=C9F00_00055;partial=true;pseudo=true;start_range=.,7678
NZ_PYKC01000001.1	Protein Homology	CDS	7678	8169	.	+	0	ID=cds-C9F00_RS24635;Parent=gene-C9F00_RS24635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9F00_RS24635;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,7678;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	8211	11573	.	-	.	ID=gene-C9F00_RS00055;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9F00_RS00055;old_locus_tag=C9F00_00060
NZ_PYKC01000001.1	Protein Homology	CDS	8211	11573	.	-	0	ID=cds-WP_000178249.1;Parent=gene-C9F00_RS00055;Dbxref=GenBank:WP_000178249.1;Name=WP_000178249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9F00_RS00055;product=mechanosensitive channel MscK;protein_id=WP_000178249.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	11692	12345	.	-	.	ID=gene-C9F00_RS00060;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9F00_RS00060;old_locus_tag=C9F00_00065
NZ_PYKC01000001.1	Protein Homology	CDS	11692	12345	.	-	0	ID=cds-WP_000101755.1;Parent=gene-C9F00_RS00060;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9F00_RS00060;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	12487	13680	.	+	.	ID=gene-C9F00_RS00065;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9F00_RS00065;old_locus_tag=C9F00_00070
NZ_PYKC01000001.1	Protein Homology	CDS	12487	13680	.	+	0	ID=cds-WP_001039202.1;Parent=gene-C9F00_RS00065;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9F00_RS00065;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	13703	16852	.	+	.	ID=gene-C9F00_RS00070;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=C9F00_RS00070;old_locus_tag=C9F00_00075
NZ_PYKC01000001.1	Protein Homology	CDS	13703	16852	.	+	0	ID=cds-WP_001132508.1;Parent=gene-C9F00_RS00070;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F00_RS00070;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	17348	17722	.	+	.	ID=gene-C9F00_RS00075;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9F00_RS00075;old_locus_tag=C9F00_00080
NZ_PYKC01000001.1	Protein Homology	CDS	17348	17722	.	+	0	ID=cds-WP_000344807.1;Parent=gene-C9F00_RS00075;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9F00_RS00075;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	17750	17968	.	+	.	ID=gene-C9F00_RS00080;Name=C9F00_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00080;old_locus_tag=C9F00_00085
NZ_PYKC01000001.1	Protein Homology	CDS	17750	17968	.	+	0	ID=cds-WP_001280991.1;Parent=gene-C9F00_RS00080;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9F00_RS00080;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	18147	18698	.	+	.	ID=gene-C9F00_RS00085;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9F00_RS00085;old_locus_tag=C9F00_00090
NZ_PYKC01000001.1	Protein Homology	CDS	18147	18698	.	+	0	ID=cds-WP_001278793.1;Parent=gene-C9F00_RS00085;Dbxref=GenBank:WP_001278793.1;Name=WP_001278793.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9F00_RS00085;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	18816	19286	.	+	.	ID=gene-C9F00_RS00090;Name=C9F00_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00090;old_locus_tag=C9F00_00095
NZ_PYKC01000001.1	Protein Homology	CDS	18816	19286	.	+	0	ID=cds-WP_000136183.1;Parent=gene-C9F00_RS00090;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9F00_RS00090;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	19342	19482	.	-	.	ID=gene-C9F00_RS00095;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9F00_RS00095;old_locus_tag=C9F00_00100
NZ_PYKC01000001.1	Protein Homology	CDS	19342	19482	.	-	0	ID=cds-WP_001197749.1;Parent=gene-C9F00_RS00095;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9F00_RS00095;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	19488	19748	.	-	.	ID=gene-C9F00_RS00100;Name=C9F00_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00100;old_locus_tag=C9F00_00105
NZ_PYKC01000001.1	Protein Homology	CDS	19488	19748	.	-	0	ID=cds-WP_000801415.1;Parent=gene-C9F00_RS00100;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9F00_RS00100;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	19973	21523	.	+	.	ID=gene-C9F00_RS00105;Name=C9F00_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00105;old_locus_tag=C9F00_00110
NZ_PYKC01000001.1	Protein Homology	CDS	19973	21523	.	+	0	ID=cds-WP_135369699.1;Parent=gene-C9F00_RS00105;Dbxref=GenBank:WP_135369699.1;Name=WP_135369699.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9F00_RS00105;product=EAL domain-containing protein;protein_id=WP_135369699.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	21573	21669	.	-	.	ID=gene-C9F00_RS00110;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9F00_RS00110;old_locus_tag=C9F00_00115
NZ_PYKC01000001.1	cmsearch	SRP_RNA	21573	21669	.	-	.	ID=rna-C9F00_RS00110;Parent=gene-C9F00_RS00110;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS00110;product=signal recognition particle sRNA small type
NZ_PYKC01000001.1	cmsearch	exon	21573	21669	.	-	.	ID=exon-C9F00_RS00110-1;Parent=rna-C9F00_RS00110;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS00110;product=signal recognition particle sRNA small type
NZ_PYKC01000001.1	RefSeq	gene	21754	22143	.	+	.	ID=gene-C9F00_RS00115;Name=C9F00_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00115;old_locus_tag=C9F00_00120
NZ_PYKC01000001.1	Protein Homology	CDS	21754	22143	.	+	0	ID=cds-WP_000961285.1;Parent=gene-C9F00_RS00115;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9F00_RS00115;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	22176	22745	.	-	.	ID=gene-C9F00_RS00120;Name=C9F00_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00120;old_locus_tag=C9F00_00125
NZ_PYKC01000001.1	Protein Homology	CDS	22176	22745	.	-	0	ID=cds-WP_000779802.1;Parent=gene-C9F00_RS00120;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9F00_RS00120;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	22960	23820	.	+	.	ID=gene-C9F00_RS00125;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9F00_RS00125;old_locus_tag=C9F00_00130
NZ_PYKC01000001.1	Protein Homology	CDS	22960	23820	.	+	0	ID=cds-WP_000084176.1;Parent=gene-C9F00_RS00125;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9F00_RS00125;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	23920	25206	.	-	.	ID=gene-C9F00_RS00130;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9F00_RS00130;old_locus_tag=C9F00_00135
NZ_PYKC01000001.1	Protein Homology	CDS	23920	25206	.	-	0	ID=cds-WP_023137940.1;Parent=gene-C9F00_RS00130;Dbxref=GenBank:WP_023137940.1;Name=WP_023137940.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9F00_RS00130;product=ammonium transporter AmtB;protein_id=WP_023137940.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	25238	25576	.	-	.	ID=gene-C9F00_RS00135;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9F00_RS00135;old_locus_tag=C9F00_00140
NZ_PYKC01000001.1	Protein Homology	CDS	25238	25576	.	-	0	ID=cds-WP_000780341.1;Parent=gene-C9F00_RS00135;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9F00_RS00135;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	25789	27570	.	-	.	ID=gene-C9F00_RS00140;Name=C9F00_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00140;old_locus_tag=C9F00_00145
NZ_PYKC01000001.1	Protein Homology	CDS	25789	27570	.	-	0	ID=cds-WP_001256071.1;Parent=gene-C9F00_RS00140;Dbxref=GenBank:WP_001256071.1;Name=WP_001256071.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F00_RS00140;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256071.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	27563	29335	.	-	.	ID=gene-C9F00_RS00145;Name=C9F00_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00145;old_locus_tag=C9F00_00150
NZ_PYKC01000001.1	Protein Homology	CDS	27563	29335	.	-	0	ID=cds-WP_001235559.1;Parent=gene-C9F00_RS00145;Dbxref=GenBank:WP_001235559.1;Name=WP_001235559.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9F00_RS00145;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235559.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	29376	29834	.	-	.	ID=gene-C9F00_RS00150;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9F00_RS00150;old_locus_tag=C9F00_00155
NZ_PYKC01000001.1	Protein Homology	CDS	29376	29834	.	-	0	ID=cds-WP_000884593.1;Parent=gene-C9F00_RS00150;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9F00_RS00150;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	29947	31002	.	+	.	ID=gene-C9F00_RS00155;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9F00_RS00155;old_locus_tag=C9F00_00160
NZ_PYKC01000001.1	Protein Homology	CDS	29947	31002	.	+	0	ID=cds-WP_000987850.1;Parent=gene-C9F00_RS00155;Dbxref=GenBank:WP_000987850.1;Name=WP_000987850.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9F00_RS00155;product=cysteine desulfhydrase;protein_id=WP_000987850.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	31052	31870	.	-	.	ID=gene-C9F00_RS00160;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9F00_RS00160;old_locus_tag=C9F00_00165
NZ_PYKC01000001.1	Protein Homology	CDS	31052	31870	.	-	0	ID=cds-WP_000113030.1;Parent=gene-C9F00_RS00160;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9F00_RS00160;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	31971	33680	.	+	.	ID=gene-C9F00_RS00165;Name=C9F00_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00165;old_locus_tag=C9F00_00170
NZ_PYKC01000001.1	Protein Homology	CDS	31971	33680	.	+	0	ID=cds-WP_135369700.1;Parent=gene-C9F00_RS00165;Dbxref=GenBank:WP_135369700.1;Name=WP_135369700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238172.1;locus_tag=C9F00_RS00165;product=SgrR family transcriptional regulator;protein_id=WP_135369700.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	33745	34440	.	+	.	ID=gene-C9F00_RS00170;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9F00_RS00170;old_locus_tag=C9F00_00175
NZ_PYKC01000001.1	Protein Homology	CDS	33745	34440	.	+	0	ID=cds-WP_135369701.1;Parent=gene-C9F00_RS00170;Dbxref=GenBank:WP_135369701.1;Name=WP_135369701.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9F00_RS00170;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_135369701.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	34546	34944	.	-	.	ID=gene-C9F00_RS00175;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9F00_RS00175;old_locus_tag=C9F00_00180
NZ_PYKC01000001.1	Protein Homology	CDS	34546	34944	.	-	0	ID=cds-WP_001194543.1;Parent=gene-C9F00_RS00175;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9F00_RS00175;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	35048	35422	.	-	.	ID=gene-C9F00_RS00180;Name=C9F00_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00180;old_locus_tag=C9F00_00185
NZ_PYKC01000001.1	Protein Homology	CDS	35048	35422	.	-	0	ID=cds-WP_000680322.1;Parent=gene-C9F00_RS00180;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9F00_RS00180;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	35572	37443	.	-	.	ID=gene-C9F00_RS00185;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9F00_RS00185;old_locus_tag=C9F00_00190
NZ_PYKC01000001.1	Protein Homology	CDS	35572	37443	.	-	0	ID=cds-WP_000969434.1;Parent=gene-C9F00_RS00185;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9F00_RS00185;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	37734	38024	.	-	.	ID=gene-C9F00_RS00190;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9F00_RS00190;old_locus_tag=C9F00_00195
NZ_PYKC01000001.1	Protein Homology	CDS	37734	38024	.	-	0	ID=cds-WP_254888479.1;Parent=gene-C9F00_RS00190;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9F00_RS00190;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	38215	40569	.	-	.	ID=gene-C9F00_RS00195;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9F00_RS00195;old_locus_tag=C9F00_00200
NZ_PYKC01000001.1	Protein Homology	CDS	38215	40569	.	-	0	ID=cds-WP_001067723.1;Parent=gene-C9F00_RS00195;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9F00_RS00195;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	40755	42026	.	-	.	ID=gene-C9F00_RS00200;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F00_RS00200;old_locus_tag=C9F00_00205
NZ_PYKC01000001.1	Protein Homology	CDS	40755	42026	.	-	0	ID=cds-WP_000130314.1;Parent=gene-C9F00_RS00200;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F00_RS00200;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	42278	42901	.	-	.	ID=gene-C9F00_RS00205;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9F00_RS00205;old_locus_tag=C9F00_00210
NZ_PYKC01000001.1	Protein Homology	CDS	42278	42901	.	-	0	ID=cds-WP_000122257.1;Parent=gene-C9F00_RS00205;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9F00_RS00205;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	43148	44446	.	-	.	ID=gene-C9F00_RS00210;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9F00_RS00210;old_locus_tag=C9F00_00215
NZ_PYKC01000001.1	Protein Homology	CDS	43148	44446	.	-	0	ID=cds-WP_001198403.1;Parent=gene-C9F00_RS00210;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9F00_RS00210;product=trigger factor;protein_id=WP_001198403.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	44793	45110	.	-	.	ID=gene-C9F00_RS00220;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9F00_RS00220;old_locus_tag=C9F00_00225
NZ_PYKC01000001.1	Protein Homology	CDS	44793	45110	.	-	0	ID=cds-WP_000973433.1;Parent=gene-C9F00_RS00220;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9F00_RS00220;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	45414	45992	.	+	.	ID=gene-C9F00_RS00225;Name=C9F00_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00225;old_locus_tag=C9F00_00235
NZ_PYKC01000001.1	Protein Homology	CDS	45414	45992	.	+	0	ID=cds-WP_135369702.1;Parent=gene-C9F00_RS00225;Dbxref=GenBank:WP_135369702.1;Name=WP_135369702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9F00_RS00225;product=lipoprotein;protein_id=WP_135369702.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	46036	47511	.	+	.	ID=gene-C9F00_RS00230;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9F00_RS00230;old_locus_tag=C9F00_00240
NZ_PYKC01000001.1	Protein Homology	CDS	46036	47511	.	+	0	ID=cds-WP_000098473.1;Parent=gene-C9F00_RS00230;Dbxref=GenBank:WP_000098473.1;Name=WP_000098473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9F00_RS00230;product=muropeptide MFS transporter AmpG;protein_id=WP_000098473.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	47964	48920	.	+	.	ID=gene-C9F00_RS00235;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9F00_RS00235;old_locus_tag=C9F00_00245
NZ_PYKC01000001.1	Protein Homology	CDS	47964	48920	.	+	0	ID=cds-WP_001239449.1;Parent=gene-C9F00_RS00235;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9F00_RS00235;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	48931	50922	.	+	.	ID=gene-C9F00_RS00240;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=C9F00_RS00240;old_locus_tag=C9F00_00250
NZ_PYKC01000001.1	Protein Homology	CDS	48931	50922	.	+	0	ID=cds-WP_000467158.1;Parent=gene-C9F00_RS00240;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9F00_RS00240;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	50912	51526	.	+	.	ID=gene-C9F00_RS00245;Name=C9F00_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00245;old_locus_tag=C9F00_00255
NZ_PYKC01000001.1	Protein Homology	CDS	50912	51526	.	+	0	ID=cds-WP_000179833.1;Parent=gene-C9F00_RS00245;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9F00_RS00245;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	51526	51855	.	+	.	ID=gene-C9F00_RS00250;Name=C9F00_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00250;old_locus_tag=C9F00_00260
NZ_PYKC01000001.1	Protein Homology	CDS	51526	51855	.	+	0	ID=cds-WP_000019878.1;Parent=gene-C9F00_RS00250;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9F00_RS00250;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	51867	52757	.	+	.	ID=gene-C9F00_RS00255;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9F00_RS00255;old_locus_tag=C9F00_00265
NZ_PYKC01000001.1	Protein Homology	CDS	51867	52757	.	+	0	ID=cds-WP_000971352.1;Parent=gene-C9F00_RS00255;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9F00_RS00255;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	gene	52839	54332	.	-	.	ID=gene-C9F00_RS00260;Name=C9F00_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00260;old_locus_tag=C9F00_00270
NZ_PYKC01000001.1	Protein Homology	CDS	52839	54332	.	-	0	ID=cds-WP_000595930.1;Parent=gene-C9F00_RS00260;Dbxref=GenBank:WP_000595930.1;Name=WP_000595930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=C9F00_RS00260;product=tetratricopeptide repeat protein;protein_id=WP_000595930.1;transl_table=11
NZ_PYKC01000001.1	RefSeq	pseudogene	54344	55090	.	-	.	ID=gene-C9F00_RS00265;Name=C9F00_RS00265;end_range=55090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS00265;old_locus_tag=C9F00_00275;partial=true;pseudo=true
NZ_PYKC01000001.1	Protein Homology	CDS	54344	55090	.	-	0	ID=cds-C9F00_RS00265;Parent=gene-C9F00_RS00265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005515;end_range=55090,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F00_RS00265;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000014.1 1 1831
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000014.1	RefSeq	region	1	1831	.	+	.	ID=NZ_PYKC01000014.1:1..1831;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000014.1	RefSeq	pseudogene	1	120	.	+	.	ID=gene-C9F00_RS03030;Name=C9F00_RS03030;end_range=120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS03030;old_locus_tag=C9F00_03085;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000014.1	Protein Homology	CDS	1	120	.	+	0	ID=cds-C9F00_RS03030;Parent=gene-C9F00_RS03030;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9F00_RS03030;partial=true;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000014.1	RefSeq	pseudogene	115	423	.	-	.	ID=gene-C9F00_RS03035;Name=C9F00_RS03035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS03035;old_locus_tag=C9F00_03090;partial=true;pseudo=true;start_range=.,115
NZ_PYKC01000014.1	Protein Homology	CDS	115	423	.	-	0	ID=cds-C9F00_RS03035;Parent=gene-C9F00_RS03035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9F00_RS03035;partial=true;product=capsule biosynthesis GfcC D2 domain-containing protein;pseudo=true;start_range=.,115;transl_table=11
NZ_PYKC01000014.1	RefSeq	gene	420	1058	.	-	.	ID=gene-C9F00_RS03040;Name=C9F00_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03040;old_locus_tag=C9F00_03095
NZ_PYKC01000014.1	Protein Homology	CDS	420	1058	.	-	0	ID=cds-WP_000824804.1;Parent=gene-C9F00_RS03040;Dbxref=GenBank:WP_000824804.1;Name=WP_000824804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9F00_RS03040;product=YjbF family lipoprotein;protein_id=WP_000824804.1;transl_table=11
NZ_PYKC01000014.1	RefSeq	gene	1122	1364	.	-	.	ID=gene-C9F00_RS03045;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9F00_RS03045;old_locus_tag=C9F00_03100
NZ_PYKC01000014.1	Protein Homology	CDS	1122	1364	.	-	0	ID=cds-WP_001541297.1;Parent=gene-C9F00_RS03045;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9F00_RS03045;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11
##sequence-region NZ_PYKC01000099.1 1 53944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000099.1	RefSeq	region	1	53944	.	+	.	ID=NZ_PYKC01000099.1:1..53944;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000099.1	RefSeq	gene	43	507	.	-	.	ID=gene-C9F00_RS15890;Name=C9F00_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15890;old_locus_tag=C9F00_16280
NZ_PYKC01000099.1	Protein Homology	CDS	43	507	.	-	0	ID=cds-WP_072275481.1;Parent=gene-C9F00_RS15890;Dbxref=GenBank:WP_072275481.1;Name=WP_072275481.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.6;locus_tag=C9F00_RS15890;product=PTS sugar transporter subunit IIA;protein_id=WP_072275481.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	1139	1387	.	+	.	ID=gene-C9F00_RS15895;Name=C9F00_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15895;old_locus_tag=C9F00_16285
NZ_PYKC01000099.1	Protein Homology	CDS	1139	1387	.	+	0	ID=cds-WP_000885424.1;Parent=gene-C9F00_RS15895;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9F00_RS15895;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	1377	1661	.	+	.	ID=gene-C9F00_RS15900;Name=C9F00_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15900;old_locus_tag=C9F00_16290
NZ_PYKC01000099.1	Protein Homology	CDS	1377	1661	.	+	0	ID=cds-WP_000221343.1;Parent=gene-C9F00_RS15900;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9F00_RS15900;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	1832	2221	.	+	.	ID=gene-C9F00_RS15905;Name=C9F00_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15905;old_locus_tag=C9F00_16295
NZ_PYKC01000099.1	Protein Homology	CDS	1832	2221	.	+	0	ID=cds-WP_001652798.1;Parent=gene-C9F00_RS15905;Dbxref=GenBank:WP_001652798.1;Name=WP_001652798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9F00_RS15905;product=RidA family protein;protein_id=WP_001652798.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	2269	3348	.	-	.	ID=gene-C9F00_RS15910;Name=C9F00_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15910;old_locus_tag=C9F00_16300
NZ_PYKC01000099.1	Protein Homology	CDS	2269	3348	.	-	0	ID=cds-WP_079973832.1;Parent=gene-C9F00_RS15910;Dbxref=GenBank:WP_079973832.1;Name=WP_079973832.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9F00_RS15910;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_079973832.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	3541	4029	.	-	.	ID=gene-C9F00_RS15915;Name=C9F00_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15915;old_locus_tag=C9F00_16305
NZ_PYKC01000099.1	Protein Homology	CDS	3541	4029	.	-	0	ID=cds-WP_001293637.1;Parent=gene-C9F00_RS15915;Dbxref=GenBank:WP_001293637.1;Name=WP_001293637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9F00_RS15915;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293637.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	4074	5582	.	+	.	ID=gene-C9F00_RS15920;Name=C9F00_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15920;old_locus_tag=C9F00_16310
NZ_PYKC01000099.1	Protein Homology	CDS	4074	5582	.	+	0	ID=cds-WP_135369105.1;Parent=gene-C9F00_RS15920;Dbxref=GenBank:WP_135369105.1;Name=WP_135369105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F00_RS15920;product=FAD-dependent oxidoreductase;protein_id=WP_135369105.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	5572	6813	.	+	.	ID=gene-C9F00_RS15925;Name=C9F00_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15925;old_locus_tag=C9F00_16315
NZ_PYKC01000099.1	Protein Homology	CDS	5572	6813	.	+	0	ID=cds-WP_135369106.1;Parent=gene-C9F00_RS15925;Dbxref=GenBank:WP_135369106.1;Name=WP_135369106.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9F00_RS15925;product=MFS transporter;protein_id=WP_135369106.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	6883	8439	.	+	.	ID=gene-C9F00_RS15930;Name=C9F00_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15930;old_locus_tag=C9F00_16320
NZ_PYKC01000099.1	Protein Homology	CDS	6883	8439	.	+	0	ID=cds-WP_135369107.1;Parent=gene-C9F00_RS15930;Dbxref=GenBank:WP_135369107.1;Name=WP_135369107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9F00_RS15930;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_135369107.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	8616	9902	.	+	.	ID=gene-C9F00_RS15935;Name=C9F00_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15935;old_locus_tag=C9F00_16325
NZ_PYKC01000099.1	Protein Homology	CDS	8616	9902	.	+	0	ID=cds-WP_000824240.1;Parent=gene-C9F00_RS15935;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9F00_RS15935;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	9877	10902	.	+	.	ID=gene-C9F00_RS15940;Name=C9F00_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15940;old_locus_tag=C9F00_16330
NZ_PYKC01000099.1	Protein Homology	CDS	9877	10902	.	+	0	ID=cds-WP_000864928.1;Parent=gene-C9F00_RS15940;Dbxref=GenBank:WP_000864928.1;Name=WP_000864928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9F00_RS15940;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864928.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	10961	11752	.	-	.	ID=gene-C9F00_RS15945;Name=C9F00_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15945;old_locus_tag=C9F00_16335
NZ_PYKC01000099.1	Protein Homology	CDS	10961	11752	.	-	0	ID=cds-WP_001518759.1;Parent=gene-C9F00_RS15945;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9F00_RS15945;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	11798	12889	.	-	.	ID=gene-C9F00_RS15950;Name=C9F00_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15950;old_locus_tag=C9F00_16340
NZ_PYKC01000099.1	Protein Homology	CDS	11798	12889	.	-	0	ID=cds-WP_000981375.1;Parent=gene-C9F00_RS15950;Dbxref=GenBank:WP_000981375.1;Name=WP_000981375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9F00_RS15950;product=choloylglycine hydrolase family protein;protein_id=WP_000981375.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	13318	14421	.	+	.	ID=gene-C9F00_RS15955;Name=C9F00_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15955;old_locus_tag=C9F00_16345
NZ_PYKC01000099.1	Protein Homology	CDS	13318	14421	.	+	0	ID=cds-WP_001194448.1;Parent=gene-C9F00_RS15955;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9F00_RS15955;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	14424	16226	.	+	.	ID=gene-C9F00_RS15960;Name=C9F00_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15960;old_locus_tag=C9F00_16350
NZ_PYKC01000099.1	Protein Homology	CDS	14424	16226	.	+	0	ID=cds-WP_000331200.1;Parent=gene-C9F00_RS15960;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F00_RS15960;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	16177	16920	.	+	.	ID=gene-C9F00_RS15965;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9F00_RS15965;old_locus_tag=C9F00_16355
NZ_PYKC01000099.1	Protein Homology	CDS	16177	16920	.	+	0	ID=cds-WP_000924456.1;Parent=gene-C9F00_RS15965;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9F00_RS15965;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	16926	17534	.	+	.	ID=gene-C9F00_RS15970;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F00_RS15970;old_locus_tag=C9F00_16360
NZ_PYKC01000099.1	Protein Homology	CDS	16926	17534	.	+	0	ID=cds-WP_000852664.1;Parent=gene-C9F00_RS15970;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9F00_RS15970;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	17534	17833	.	+	.	ID=gene-C9F00_RS15975;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F00_RS15975;old_locus_tag=C9F00_16365
NZ_PYKC01000099.1	Protein Homology	CDS	17534	17833	.	+	0	ID=cds-WP_000334902.1;Parent=gene-C9F00_RS15975;Dbxref=GenBank:WP_000334902.1;Name=WP_000334902.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9F00_RS15975;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334902.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	17830	18240	.	+	.	ID=gene-C9F00_RS15980;Name=C9F00_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15980;old_locus_tag=C9F00_16370
NZ_PYKC01000099.1	Protein Homology	CDS	17830	18240	.	+	0	ID=cds-WP_000155986.1;Parent=gene-C9F00_RS15980;Dbxref=GenBank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9F00_RS15980;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	18258	19319	.	+	.	ID=gene-C9F00_RS15985;Name=C9F00_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15985;old_locus_tag=C9F00_16375
NZ_PYKC01000099.1	Protein Homology	CDS	18258	19319	.	+	0	ID=cds-WP_001016756.1;Parent=gene-C9F00_RS15985;Dbxref=GenBank:WP_001016756.1;Name=WP_001016756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9F00_RS15985;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016756.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	19307	20194	.	+	.	ID=gene-C9F00_RS15990;Name=C9F00_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15990;old_locus_tag=C9F00_16380
NZ_PYKC01000099.1	Protein Homology	CDS	19307	20194	.	+	0	ID=cds-WP_080081369.1;Parent=gene-C9F00_RS15990;Dbxref=GenBank:WP_080081369.1;Name=WP_080081369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9F00_RS15990;product=ATP/GTP-binding protein;protein_id=WP_080081369.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	20207	20548	.	+	.	ID=gene-C9F00_RS15995;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F00_RS15995;old_locus_tag=C9F00_16385
NZ_PYKC01000099.1	Protein Homology	CDS	20207	20548	.	+	0	ID=cds-WP_000544772.1;Parent=gene-C9F00_RS15995;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9F00_RS15995;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	20689	21807	.	-	.	ID=gene-C9F00_RS16000;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9F00_RS16000;old_locus_tag=C9F00_16390
NZ_PYKC01000099.1	Protein Homology	CDS	20689	21807	.	-	0	ID=cds-WP_000758336.1;Parent=gene-C9F00_RS16000;Dbxref=GenBank:WP_000758336.1;Name=WP_000758336.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9F00_RS16000;product=porin OmpC;protein_id=WP_000758336.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	22524	23066	.	+	.	ID=gene-C9F00_RS16005;Name=C9F00_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16005;old_locus_tag=C9F00_16395
NZ_PYKC01000099.1	Protein Homology	CDS	22524	23066	.	+	0	ID=cds-WP_050067591.1;Parent=gene-C9F00_RS16005;Dbxref=GenBank:WP_050067591.1;Name=WP_050067591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9F00_RS16005;product=YybH family protein;protein_id=WP_050067591.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	23122	24036	.	-	.	ID=gene-C9F00_RS16010;Name=C9F00_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16010;old_locus_tag=C9F00_16400
NZ_PYKC01000099.1	Protein Homology	CDS	23122	24036	.	-	0	ID=cds-WP_023204287.1;Parent=gene-C9F00_RS16010;Dbxref=GenBank:WP_023204287.1;Name=WP_023204287.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=C9F00_RS16010;product=bestrophin family protein;protein_id=WP_023204287.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	24293	24652	.	-	.	ID=gene-C9F00_RS16015;Name=C9F00_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16015;old_locus_tag=C9F00_16405
NZ_PYKC01000099.1	Protein Homology	CDS	24293	24652	.	-	0	ID=cds-WP_000992451.1;Parent=gene-C9F00_RS16015;Dbxref=GenBank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9F00_RS16015;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	24652	25578	.	-	.	ID=gene-C9F00_RS16020;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9F00_RS16020;old_locus_tag=C9F00_16410
NZ_PYKC01000099.1	Protein Homology	CDS	24652	25578	.	-	0	ID=cds-WP_000090081.1;Parent=gene-C9F00_RS16020;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F00_RS16020;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	25651	27039	.	-	.	ID=gene-C9F00_RS16025;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=C9F00_RS16025;old_locus_tag=C9F00_16415
NZ_PYKC01000099.1	Protein Homology	CDS	25651	27039	.	-	0	ID=cds-WP_000178413.1;Parent=gene-C9F00_RS16025;Dbxref=GenBank:WP_000178413.1;Name=WP_000178413.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9F00_RS16025;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178413.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	27142	28014	.	+	.	ID=gene-C9F00_RS16030;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=C9F00_RS16030;old_locus_tag=C9F00_16420
NZ_PYKC01000099.1	Protein Homology	CDS	27142	28014	.	+	0	ID=cds-WP_135369109.1;Parent=gene-C9F00_RS16030;Dbxref=GenBank:WP_135369109.1;Name=WP_135369109.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9F00_RS16030;product=putrescine utilization regulator PtrR;protein_id=WP_135369109.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	28130	29320	.	+	.	ID=gene-C9F00_RS16035;Name=C9F00_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16035;old_locus_tag=C9F00_16425
NZ_PYKC01000099.1	Protein Homology	CDS	28130	29320	.	+	0	ID=cds-WP_000154617.1;Parent=gene-C9F00_RS16035;Dbxref=GenBank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9F00_RS16035;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	29367	30032	.	-	.	ID=gene-C9F00_RS16040;Name=C9F00_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16040;old_locus_tag=C9F00_16430
NZ_PYKC01000099.1	Protein Homology	CDS	29367	30032	.	-	0	ID=cds-WP_000968968.1;Parent=gene-C9F00_RS16040;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9F00_RS16040;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	30291	30725	.	+	.	ID=gene-C9F00_RS16045;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9F00_RS16045;old_locus_tag=C9F00_16435
NZ_PYKC01000099.1	Protein Homology	CDS	30291	30725	.	+	0	ID=cds-WP_000843434.1;Parent=gene-C9F00_RS16045;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9F00_RS16045;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	30745	31128	.	+	.	ID=gene-C9F00_RS16050;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9F00_RS16050;old_locus_tag=C9F00_16440
NZ_PYKC01000099.1	Protein Homology	CDS	30745	31128	.	+	0	ID=cds-WP_000091194.1;Parent=gene-C9F00_RS16050;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9F00_RS16050;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	31157	31372	.	+	.	ID=gene-C9F00_RS16055;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9F00_RS16055;old_locus_tag=C9F00_16445
NZ_PYKC01000099.1	Protein Homology	CDS	31157	31372	.	+	0	ID=cds-WP_000783049.1;Parent=gene-C9F00_RS16055;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9F00_RS16055;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	31491	32393	.	-	.	ID=gene-C9F00_RS16060;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9F00_RS16060;old_locus_tag=C9F00_16450
NZ_PYKC01000099.1	Protein Homology	CDS	31491	32393	.	-	0	ID=cds-WP_135369110.1;Parent=gene-C9F00_RS16060;Dbxref=GenBank:WP_135369110.1;Name=WP_135369110.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9F00_RS16060;product=O-acetylserine/cysteine exporter;protein_id=WP_135369110.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	32621	33808	.	+	.	ID=gene-C9F00_RS16065;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=C9F00_RS16065;old_locus_tag=C9F00_16455
NZ_PYKC01000099.1	Protein Homology	CDS	32621	33808	.	+	0	ID=cds-WP_001068056.1;Parent=gene-C9F00_RS16065;Dbxref=GenBank:WP_001068056.1;Name=WP_001068056.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9F00_RS16065;product=efflux MFS transporter YdeE;protein_id=WP_001068056.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	34056	34151	.	+	.	ID=gene-C9F00_RS16070;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9F00_RS16070;old_locus_tag=C9F00_16460
NZ_PYKC01000099.1	Protein Homology	CDS	34056	34151	.	+	0	ID=cds-WP_000901531.1;Parent=gene-C9F00_RS16070;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9F00_RS16070;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	34499	34891	.	-	.	ID=gene-C9F00_RS16075;Name=C9F00_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16075;old_locus_tag=C9F00_16465
NZ_PYKC01000099.1	Protein Homology	CDS	34499	34891	.	-	0	ID=cds-WP_000776351.1;Parent=gene-C9F00_RS16075;Dbxref=GenBank:WP_000776351.1;Name=WP_000776351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9F00_RS16075;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776351.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	35317	35844	.	+	.	ID=gene-C9F00_RS16080;Name=C9F00_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16080;old_locus_tag=C9F00_16470
NZ_PYKC01000099.1	Protein Homology	CDS	35317	35844	.	+	0	ID=cds-WP_001235357.1;Parent=gene-C9F00_RS16080;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9F00_RS16080;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	35964	36146	.	-	.	ID=gene-C9F00_RS16085;Name=C9F00_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16085;old_locus_tag=C9F00_16475
NZ_PYKC01000099.1	Protein Homology	CDS	35964	36146	.	-	0	ID=cds-WP_000807642.1;Parent=gene-C9F00_RS16085;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9F00_RS16085;product=general stress protein;protein_id=WP_000807642.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	36491	38533	.	-	.	ID=gene-C9F00_RS16095;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9F00_RS16095;old_locus_tag=C9F00_16485
NZ_PYKC01000099.1	Protein Homology	CDS	36491	38533	.	-	0	ID=cds-WP_000106261.1;Parent=gene-C9F00_RS16095;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9F00_RS16095;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	38672	39418	.	+	.	ID=gene-C9F00_RS16100;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9F00_RS16100;old_locus_tag=C9F00_16490
NZ_PYKC01000099.1	Protein Homology	CDS	38672	39418	.	+	0	ID=cds-WP_135369111.1;Parent=gene-C9F00_RS16100;Dbxref=GenBank:WP_135369111.1;Name=WP_135369111.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9F00_RS16100;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_135369111.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	39548	40234	.	+	.	ID=gene-C9F00_RS16105;Name=C9F00_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16105;old_locus_tag=C9F00_16495
NZ_PYKC01000099.1	Protein Homology	CDS	39548	40234	.	+	0	ID=cds-WP_000215563.1;Parent=gene-C9F00_RS16105;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9F00_RS16105;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	40415	40618	.	+	.	ID=gene-C9F00_RS16110;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9F00_RS16110;old_locus_tag=C9F00_16500
NZ_PYKC01000099.1	Protein Homology	CDS	40415	40618	.	+	0	ID=cds-WP_000989267.1;Parent=gene-C9F00_RS16110;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9F00_RS16110;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	40685	42151	.	-	.	ID=gene-C9F00_RS16115;Name=C9F00_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16115;old_locus_tag=C9F00_16505
NZ_PYKC01000099.1	Protein Homology	CDS	40685	42151	.	-	0	ID=cds-WP_017465703.1;Parent=gene-C9F00_RS16115;Dbxref=GenBank:WP_017465703.1;Name=WP_017465703.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9F00_RS16115;product=mannitol dehydrogenase family protein;protein_id=WP_017465703.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	42295	43674	.	-	.	ID=gene-C9F00_RS16120;Name=C9F00_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16120;old_locus_tag=C9F00_16510
NZ_PYKC01000099.1	Protein Homology	CDS	42295	43674	.	-	0	ID=cds-WP_023224957.1;Parent=gene-C9F00_RS16120;Dbxref=GenBank:WP_023224957.1;Name=WP_023224957.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9F00_RS16120;product=MFS transporter;protein_id=WP_023224957.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	43728	44747	.	-	.	ID=gene-C9F00_RS16125;Name=C9F00_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16125;old_locus_tag=C9F00_16515
NZ_PYKC01000099.1	Protein Homology	CDS	43728	44747	.	-	0	ID=cds-WP_135369112.1;Parent=gene-C9F00_RS16125;Dbxref=GenBank:WP_135369112.1;Name=WP_135369112.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9F00_RS16125;product=Zn-dependent oxidoreductase;protein_id=WP_135369112.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	44758	45972	.	-	.	ID=gene-C9F00_RS16130;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9F00_RS16130;old_locus_tag=C9F00_16520
NZ_PYKC01000099.1	Protein Homology	CDS	44758	45972	.	-	0	ID=cds-WP_135369113.1;Parent=gene-C9F00_RS16130;Dbxref=GenBank:WP_135369113.1;Name=WP_135369113.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9F00_RS16130;product=starvation-sensing protein RspA;protein_id=WP_135369113.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	46094	46420	.	-	.	ID=gene-C9F00_RS16135;Name=C9F00_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16135;old_locus_tag=C9F00_16525
NZ_PYKC01000099.1	Protein Homology	CDS	46094	46420	.	-	0	ID=cds-WP_000921389.1;Parent=gene-C9F00_RS16135;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9F00_RS16135;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	46572	46913	.	+	.	ID=gene-C9F00_RS16140;Name=C9F00_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16140;old_locus_tag=C9F00_16530
NZ_PYKC01000099.1	Protein Homology	CDS	46572	46913	.	+	0	ID=cds-WP_001066440.1;Parent=gene-C9F00_RS16140;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9F00_RS16140;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	46949	47509	.	+	.	ID=gene-C9F00_RS16145;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9F00_RS16145;old_locus_tag=C9F00_16535
NZ_PYKC01000099.1	Protein Homology	CDS	46949	47509	.	+	0	ID=cds-WP_000199997.1;Parent=gene-C9F00_RS16145;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9F00_RS16145;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	pseudogene	47550	48259	.	-	.	ID=gene-C9F00_RS16150;Name=C9F00_RS16150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS16150;old_locus_tag=C9F00_16540;pseudo=true
NZ_PYKC01000099.1	Protein Homology	CDS	47550	48259	.	-	0	ID=cds-C9F00_RS16150;Parent=gene-C9F00_RS16150;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9F00_RS16150;product=YnfC family lipoprotein;pseudo=true;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	48363	48671	.	+	.	ID=gene-C9F00_RS16155;Name=C9F00_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16155;old_locus_tag=C9F00_16545
NZ_PYKC01000099.1	Protein Homology	CDS	48363	48671	.	+	0	ID=cds-WP_000975516.1;Parent=gene-C9F00_RS16155;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9F00_RS16155;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	48828	51266	.	+	.	ID=gene-C9F00_RS16160;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=C9F00_RS16160;old_locus_tag=C9F00_16550
NZ_PYKC01000099.1	Protein Homology	CDS	48828	51266	.	+	0	ID=cds-WP_023227484.1;Parent=gene-C9F00_RS16160;Dbxref=GenBank:WP_023227484.1;Name=WP_023227484.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=C9F00_RS16160;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_023227484.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	51365	53800	.	+	.	ID=gene-C9F00_RS16165;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=C9F00_RS16165;old_locus_tag=C9F00_16555
NZ_PYKC01000099.1	Protein Homology	CDS	51365	53800	.	+	0	ID=cds-WP_000705276.1;Parent=gene-C9F00_RS16165;Dbxref=GenBank:WP_000705276.1;Name=WP_000705276.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9F00_RS16165;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_000705276.1;transl_table=11
NZ_PYKC01000099.1	RefSeq	gene	53811	53944	.	+	.	ID=gene-C9F00_RS16170;Name=C9F00_RS16170;end_range=53944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16170;old_locus_tag=C9F00_16560;partial=true
NZ_PYKC01000099.1	Protein Homology	CDS	53811	53944	.	+	0	ID=cds-WP_167850721.1;Parent=gene-C9F00_RS16170;Dbxref=GenBank:WP_167850721.1;Name=WP_167850721.1;end_range=53944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9F00_RS16170;partial=true;product=4Fe-4S binding protein;protein_id=WP_167850721.1;transl_table=11
##sequence-region NZ_PYKC01000027.1 1 53529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000027.1	RefSeq	region	1	53529	.	+	.	ID=NZ_PYKC01000027.1:1..53529;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000027.1	RefSeq	pseudogene	1	260	.	+	.	ID=gene-C9F00_RS24335;Name=C9F00_RS24335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24335;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000027.1	Protein Homology	CDS	1	260	.	+	2	ID=cds-C9F00_RS24335;Parent=gene-C9F00_RS24335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9F00_RS24335;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	332	913	.	+	.	ID=gene-C9F00_RS04730;Name=C9F00_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04730;old_locus_tag=C9F00_04800
NZ_PYKC01000027.1	Protein Homology	CDS	332	913	.	+	0	ID=cds-WP_135369661.1;Parent=gene-C9F00_RS04730;Dbxref=GenBank:WP_135369661.1;Name=WP_135369661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9F00_RS04730;product=Slp family lipoprotein;protein_id=WP_135369661.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	1118	2803	.	+	.	ID=gene-C9F00_RS04735;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=C9F00_RS04735;old_locus_tag=C9F00_04810
NZ_PYKC01000027.1	Protein Homology	CDS	1118	2803	.	+	0	ID=cds-WP_000758418.1;Parent=gene-C9F00_RS04735;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9F00_RS04735;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	2876	4003	.	+	.	ID=gene-C9F00_RS04740;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9F00_RS04740;old_locus_tag=C9F00_04815
NZ_PYKC01000027.1	Protein Homology	CDS	2876	4003	.	+	0	ID=cds-WP_135492157.1;Parent=gene-C9F00_RS04740;Dbxref=GenBank:WP_135492157.1;Name=WP_135492157.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9F00_RS04740;product=ribonuclease D;protein_id=WP_135492157.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	4124	4390	.	-	.	ID=gene-C9F00_RS04745;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9F00_RS04745;old_locus_tag=C9F00_04820
NZ_PYKC01000027.1	Protein Homology	CDS	4124	4390	.	-	0	ID=cds-WP_001185666.1;Parent=gene-C9F00_RS04745;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9F00_RS04745;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	4394	5206	.	-	.	ID=gene-C9F00_RS04750;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9F00_RS04750;old_locus_tag=C9F00_04825
NZ_PYKC01000027.1	Protein Homology	CDS	4394	5206	.	-	0	ID=cds-WP_000101047.1;Parent=gene-C9F00_RS04750;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F00_RS04750;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	5230	5937	.	-	.	ID=gene-C9F00_RS04755;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9F00_RS04755;old_locus_tag=C9F00_04830
NZ_PYKC01000027.1	Protein Homology	CDS	5230	5937	.	-	0	ID=cds-WP_000072527.1;Parent=gene-C9F00_RS04755;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9F00_RS04755;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	6063	6356	.	+	.	ID=gene-C9F00_RS04760;Name=C9F00_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04760;old_locus_tag=C9F00_04835
NZ_PYKC01000027.1	Protein Homology	CDS	6063	6356	.	+	0	ID=cds-WP_001670513.1;Parent=gene-C9F00_RS04760;Dbxref=GenBank:WP_001670513.1;Name=WP_001670513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9F00_RS04760;product=YcgL domain-containing protein;protein_id=WP_001670513.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	6406	7065	.	+	.	ID=gene-C9F00_RS04765;Name=C9F00_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04765;old_locus_tag=C9F00_04840
NZ_PYKC01000027.1	Protein Homology	CDS	6406	7065	.	+	0	ID=cds-WP_001519895.1;Parent=gene-C9F00_RS04765;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9F00_RS04765;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	7158	7604	.	+	.	ID=gene-C9F00_RS04770;Name=C9F00_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04770;old_locus_tag=C9F00_04845
NZ_PYKC01000027.1	Protein Homology	CDS	7158	7604	.	+	0	ID=cds-WP_001285703.1;Parent=gene-C9F00_RS04770;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9F00_RS04770;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	7956	8093	.	+	.	ID=gene-C9F00_RS04775;Name=C9F00_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04775;old_locus_tag=C9F00_04850
NZ_PYKC01000027.1	Protein Homology	CDS	7956	8093	.	+	0	ID=cds-WP_001519337.1;Parent=gene-C9F00_RS04775;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9F00_RS04775;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	8285	8458	.	+	.	ID=gene-C9F00_RS04780;Name=C9F00_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04780;old_locus_tag=C9F00_04855
NZ_PYKC01000027.1	Protein Homology	CDS	8285	8458	.	+	0	ID=cds-WP_001083582.1;Parent=gene-C9F00_RS04780;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9F00_RS04780;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	8530	8871	.	-	.	ID=gene-C9F00_RS04785;Name=C9F00_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04785;old_locus_tag=C9F00_04860
NZ_PYKC01000027.1	Protein Homology	CDS	8530	8871	.	-	0	ID=cds-WP_000018967.1;Parent=gene-C9F00_RS04785;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9F00_RS04785;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	8980	9510	.	-	.	ID=gene-C9F00_RS04790;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9F00_RS04790;old_locus_tag=C9F00_04865
NZ_PYKC01000027.1	Protein Homology	CDS	8980	9510	.	-	0	ID=cds-WP_000943475.1;Parent=gene-C9F00_RS04790;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9F00_RS04790;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	9652	11196	.	-	.	ID=gene-C9F00_RS04795;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9F00_RS04795;old_locus_tag=C9F00_04870
NZ_PYKC01000027.1	Protein Homology	CDS	9652	11196	.	-	0	ID=cds-WP_000406438.1;Parent=gene-C9F00_RS04795;Dbxref=GenBank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9F00_RS04795;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	11416	12135	.	+	.	ID=gene-C9F00_RS04800;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9F00_RS04800;old_locus_tag=C9F00_04875
NZ_PYKC01000027.1	Protein Homology	CDS	11416	12135	.	+	0	ID=cds-WP_000234826.1;Parent=gene-C9F00_RS04800;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9F00_RS04800;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	12182	13714	.	-	.	ID=gene-C9F00_RS04805;Name=C9F00_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04805;old_locus_tag=C9F00_04880
NZ_PYKC01000027.1	Protein Homology	CDS	12182	13714	.	-	0	ID=cds-WP_001240762.1;Parent=gene-C9F00_RS04805;Dbxref=GenBank:WP_001240762.1;Name=WP_001240762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9F00_RS04805;product=SpoVR family protein;protein_id=WP_001240762.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	14037	15335	.	+	.	ID=gene-C9F00_RS04810;Name=C9F00_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04810;old_locus_tag=C9F00_04885
NZ_PYKC01000027.1	Protein Homology	CDS	14037	15335	.	+	0	ID=cds-WP_001266938.1;Parent=gene-C9F00_RS04810;Dbxref=GenBank:WP_001266938.1;Name=WP_001266938.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9F00_RS04810;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	15349	16419	.	+	.	ID=gene-C9F00_RS04815;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9F00_RS04815;old_locus_tag=C9F00_04890
NZ_PYKC01000027.1	Protein Homology	CDS	15349	16419	.	+	0	ID=cds-WP_023138816.1;Parent=gene-C9F00_RS04815;Dbxref=GenBank:WP_023138816.1;Name=WP_023138816.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9F00_RS04815;product=catabolic alanine racemase DadX;protein_id=WP_023138816.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	pseudogene	16424	16543	.	+	.	ID=gene-C9F00_RS24780;Name=C9F00_RS24780;end_range=16543,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24780;partial=true;pseudo=true
NZ_PYKC01000027.1	Protein Homology	CDS	16424	16543	.	+	0	ID=cds-C9F00_RS24780;Parent=gene-C9F00_RS24780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16543,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=C9F00_RS24780;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000027.1	RefSeq	pseudogene	16499	18214	.	-	.	ID=gene-C9F00_RS04820;Name=C9F00_RS04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS04820;old_locus_tag=C9F00_04895;partial=true;pseudo=true;start_range=.,16499
NZ_PYKC01000027.1	Protein Homology	CDS	16499	18214	.	-	0	ID=cds-C9F00_RS04820;Parent=gene-C9F00_RS04820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=C9F00_RS04820;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,16499;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	18311	19225	.	-	.	ID=gene-C9F00_RS04825;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9F00_RS04825;old_locus_tag=C9F00_04900
NZ_PYKC01000027.1	Protein Homology	CDS	18311	19225	.	-	0	ID=cds-WP_023260327.1;Parent=gene-C9F00_RS04825;Dbxref=GenBank:WP_023260327.1;Name=WP_023260327.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9F00_RS04825;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023260327.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	19396	20007	.	+	.	ID=gene-C9F00_RS04830;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9F00_RS04830;old_locus_tag=C9F00_04905
NZ_PYKC01000027.1	Protein Homology	CDS	19396	20007	.	+	0	ID=cds-WP_000776974.1;Parent=gene-C9F00_RS04830;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9F00_RS04830;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	20021	20755	.	-	.	ID=gene-C9F00_RS04835;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9F00_RS04835;old_locus_tag=C9F00_04910
NZ_PYKC01000027.1	Protein Homology	CDS	20021	20755	.	-	0	ID=cds-WP_000017414.1;Parent=gene-C9F00_RS04835;Dbxref=GenBank:WP_000017414.1;Name=WP_000017414.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F00_RS04835;product=flagellar brake protein YcgR;protein_id=WP_000017414.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	20924	21178	.	+	.	ID=gene-C9F00_RS04840;Name=C9F00_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04840;old_locus_tag=C9F00_04915
NZ_PYKC01000027.1	Protein Homology	CDS	20924	21178	.	+	0	ID=cds-WP_000511323.1;Parent=gene-C9F00_RS04840;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9F00_RS04840;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	21241	22953	.	-	.	ID=gene-C9F00_RS04845;Name=C9F00_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04845;old_locus_tag=C9F00_04920
NZ_PYKC01000027.1	Protein Homology	CDS	21241	22953	.	-	0	ID=cds-WP_064047394.1;Parent=gene-C9F00_RS04845;Dbxref=GenBank:WP_064047394.1;Name=WP_064047394.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F00_RS04845;product=alpha%2Calpha-trehalase;protein_id=WP_064047394.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	23167	24441	.	-	.	ID=gene-C9F00_RS04850;Name=C9F00_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04850;old_locus_tag=C9F00_04925
NZ_PYKC01000027.1	Protein Homology	CDS	23167	24441	.	-	0	ID=cds-WP_001519734.1;Parent=gene-C9F00_RS04850;Dbxref=GenBank:WP_001519734.1;Name=WP_001519734.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9F00_RS04850;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001519734.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	24836	24925	.	-	.	ID=gene-C9F00_RS04855;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9F00_RS04855;old_locus_tag=C9F00_04930
NZ_PYKC01000027.1	Protein Homology	CDS	24836	24925	.	-	0	ID=cds-WP_000270301.1;Parent=gene-C9F00_RS04855;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9F00_RS04855;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	24938	26074	.	-	.	ID=gene-C9F00_RS04860;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9F00_RS04860;old_locus_tag=C9F00_04935
NZ_PYKC01000027.1	Protein Homology	CDS	24938	26074	.	-	0	ID=cds-WP_000888110.1;Parent=gene-C9F00_RS04860;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9F00_RS04860;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	26086	27630	.	-	.	ID=gene-C9F00_RS04865;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9F00_RS04865;old_locus_tag=C9F00_04940
NZ_PYKC01000027.1	Protein Homology	CDS	26086	27630	.	-	0	ID=cds-WP_000263615.1;Parent=gene-C9F00_RS04865;Dbxref=GenBank:WP_000263615.1;Name=WP_000263615.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9F00_RS04865;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263615.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	27705	28553	.	-	.	ID=gene-C9F00_RS04870;Name=C9F00_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04870;old_locus_tag=C9F00_04945
NZ_PYKC01000027.1	Protein Homology	CDS	27705	28553	.	-	0	ID=cds-WP_000063377.1;Parent=gene-C9F00_RS04870;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9F00_RS04870;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	28550	28954	.	-	.	ID=gene-C9F00_RS04875;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9F00_RS04875;old_locus_tag=C9F00_04950
NZ_PYKC01000027.1	Protein Homology	CDS	28550	28954	.	-	0	ID=cds-WP_001262580.1;Parent=gene-C9F00_RS04875;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9F00_RS04875;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	28944	29540	.	-	.	ID=gene-C9F00_RS04880;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=C9F00_RS04880;old_locus_tag=C9F00_04955
NZ_PYKC01000027.1	Protein Homology	CDS	28944	29540	.	-	0	ID=cds-WP_135369660.1;Parent=gene-C9F00_RS04880;Dbxref=GenBank:WP_135369660.1;Name=WP_135369660.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9F00_RS04880;product=hydrogenase 1 maturation protease;protein_id=WP_135369660.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	29537	30268	.	-	.	ID=gene-C9F00_RS04885;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9F00_RS04885;old_locus_tag=C9F00_04960
NZ_PYKC01000027.1	Protein Homology	CDS	29537	30268	.	-	0	ID=cds-WP_000147036.1;Parent=gene-C9F00_RS04885;Dbxref=GenBank:WP_000147036.1;Name=WP_000147036.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9F00_RS04885;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147036.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	30287	32080	.	-	.	ID=gene-C9F00_RS04890;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9F00_RS04890;old_locus_tag=C9F00_04965
NZ_PYKC01000027.1	Protein Homology	CDS	30287	32080	.	-	0	ID=cds-WP_000070982.1;Parent=gene-C9F00_RS04890;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9F00_RS04890;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	32077	33195	.	-	.	ID=gene-C9F00_RS04895;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=C9F00_RS04895;old_locus_tag=C9F00_04970
NZ_PYKC01000027.1	Protein Homology	CDS	32077	33195	.	-	0	ID=cds-WP_001058312.1;Parent=gene-C9F00_RS04895;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9F00_RS04895;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	33690	34955	.	+	.	ID=gene-C9F00_RS04900;Name=C9F00_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04900;old_locus_tag=C9F00_04975
NZ_PYKC01000027.1	Protein Homology	CDS	33690	34955	.	+	0	ID=cds-WP_135420034.1;Parent=gene-C9F00_RS04900;Dbxref=GenBank:WP_135420034.1;Name=WP_135420034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9F00_RS04900;product=DUF4427 domain-containing protein;protein_id=WP_135420034.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	35439	35894	.	-	.	ID=gene-C9F00_RS04905;Name=C9F00_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04905;old_locus_tag=C9F00_04985
NZ_PYKC01000027.1	Protein Homology	CDS	35439	35894	.	-	0	ID=cds-WP_000487337.1;Parent=gene-C9F00_RS04905;Dbxref=GenBank:WP_000487337.1;Name=WP_000487337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=C9F00_RS04905;product=hypothetical protein;protein_id=WP_000487337.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	35933	36553	.	-	.	ID=gene-C9F00_RS04910;Name=C9F00_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04910;old_locus_tag=C9F00_04990
NZ_PYKC01000027.1	Protein Homology	CDS	35933	36553	.	-	0	ID=cds-WP_186799079.1;Parent=gene-C9F00_RS04910;Dbxref=GenBank:WP_186799079.1;Name=WP_186799079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=C9F00_RS04910;product=hypothetical protein;protein_id=WP_186799079.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	37310	38401	.	-	.	ID=gene-C9F00_RS04915;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9F00_RS04915;old_locus_tag=C9F00_04995
NZ_PYKC01000027.1	Protein Homology	CDS	37310	38401	.	-	0	ID=cds-WP_135492159.1;Parent=gene-C9F00_RS04915;Dbxref=GenBank:WP_135492159.1;Name=WP_135492159.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9F00_RS04915;product=redox-regulated ATPase YchF;protein_id=WP_135492159.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	38518	39102	.	-	.	ID=gene-C9F00_RS04920;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9F00_RS04920;old_locus_tag=C9F00_05000
NZ_PYKC01000027.1	Protein Homology	CDS	38518	39102	.	-	0	ID=cds-WP_000985595.1;Parent=gene-C9F00_RS04920;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9F00_RS04920;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	39378	39656	.	+	.	ID=gene-C9F00_RS04925;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9F00_RS04925;old_locus_tag=C9F00_05005
NZ_PYKC01000027.1	Protein Homology	CDS	39378	39656	.	+	0	ID=cds-WP_000823879.1;Parent=gene-C9F00_RS04925;Dbxref=GenBank:WP_000823879.1;Name=WP_000823879.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9F00_RS04925;product=stress-induced protein YchH;protein_id=WP_000823879.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	39701	41386	.	-	.	ID=gene-C9F00_RS04930;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9F00_RS04930;old_locus_tag=C9F00_05010
NZ_PYKC01000027.1	Protein Homology	CDS	39701	41386	.	-	0	ID=cds-WP_001037181.1;Parent=gene-C9F00_RS04930;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9F00_RS04930;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	41511	42458	.	-	.	ID=gene-C9F00_RS04935;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9F00_RS04935;old_locus_tag=C9F00_05015
NZ_PYKC01000027.1	Protein Homology	CDS	41511	42458	.	-	0	ID=cds-WP_001518537.1;Parent=gene-C9F00_RS04935;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9F00_RS04935;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	42724	43575	.	-	.	ID=gene-C9F00_RS04940;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9F00_RS04940;old_locus_tag=C9F00_05020
NZ_PYKC01000027.1	Protein Homology	CDS	42724	43575	.	-	0	ID=cds-WP_000988246.1;Parent=gene-C9F00_RS04940;Dbxref=GenBank:WP_000988246.1;Name=WP_000988246.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9F00_RS04940;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988246.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	43572	44195	.	-	.	ID=gene-C9F00_RS04945;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9F00_RS04945;old_locus_tag=C9F00_05025
NZ_PYKC01000027.1	Protein Homology	CDS	43572	44195	.	-	0	ID=cds-WP_000174484.1;Parent=gene-C9F00_RS04945;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9F00_RS04945;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	44509	45765	.	+	.	ID=gene-C9F00_RS04950;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9F00_RS04950;old_locus_tag=C9F00_05030
NZ_PYKC01000027.1	Protein Homology	CDS	44509	45765	.	+	0	ID=cds-WP_000173208.1;Parent=gene-C9F00_RS04950;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9F00_RS04950;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	45806	46888	.	+	.	ID=gene-C9F00_RS04955;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9F00_RS04955;old_locus_tag=C9F00_05035
NZ_PYKC01000027.1	Protein Homology	CDS	45806	46888	.	+	0	ID=cds-WP_000804703.1;Parent=gene-C9F00_RS04955;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9F00_RS04955;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	46888	47721	.	+	.	ID=gene-C9F00_RS04960;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9F00_RS04960;old_locus_tag=C9F00_05040
NZ_PYKC01000027.1	Protein Homology	CDS	46888	47721	.	+	0	ID=cds-WP_000347310.1;Parent=gene-C9F00_RS04960;Dbxref=GenBank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9F00_RS04960;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	47718	48107	.	+	.	ID=gene-C9F00_RS04965;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9F00_RS04965;old_locus_tag=C9F00_05045
NZ_PYKC01000027.1	Protein Homology	CDS	47718	48107	.	+	0	ID=cds-WP_135369433.1;Parent=gene-C9F00_RS04965;Dbxref=GenBank:WP_135369433.1;Name=WP_135369433.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9F00_RS04965;product=invasion regulator SirB2;protein_id=WP_135369433.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	48111	48920	.	+	.	ID=gene-C9F00_RS04970;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9F00_RS04970;old_locus_tag=C9F00_05050
NZ_PYKC01000027.1	Protein Homology	CDS	48111	48920	.	+	0	ID=cds-WP_001257065.1;Parent=gene-C9F00_RS04970;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9F00_RS04970;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	48958	49812	.	+	.	ID=gene-C9F00_RS04975;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9F00_RS04975;old_locus_tag=C9F00_05055
NZ_PYKC01000027.1	Protein Homology	CDS	48958	49812	.	+	0	ID=cds-WP_000811046.1;Parent=gene-C9F00_RS04975;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9F00_RS04975;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	49866	50966	.	-	.	ID=gene-C9F00_RS04980;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9F00_RS04980;old_locus_tag=C9F00_05060
NZ_PYKC01000027.1	Protein Homology	CDS	49866	50966	.	-	0	ID=cds-WP_000148418.1;Parent=gene-C9F00_RS04980;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9F00_RS04980;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	51233	51463	.	+	.	ID=gene-C9F00_RS04985;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9F00_RS04985;old_locus_tag=C9F00_05065
NZ_PYKC01000027.1	Protein Homology	CDS	51233	51463	.	+	0	ID=cds-WP_001146392.1;Parent=gene-C9F00_RS04985;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9F00_RS04985;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	51543	51896	.	-	.	ID=gene-C9F00_RS04990;Name=C9F00_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04990;old_locus_tag=C9F00_05070
NZ_PYKC01000027.1	Protein Homology	CDS	51543	51896	.	-	0	ID=cds-WP_001179794.1;Parent=gene-C9F00_RS04990;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9F00_RS04990;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11
NZ_PYKC01000027.1	RefSeq	gene	52073	53497	.	+	.	ID=gene-C9F00_RS04995;Name=C9F00_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04995;old_locus_tag=C9F00_05075
NZ_PYKC01000027.1	Protein Homology	CDS	52073	53497	.	+	0	ID=cds-WP_001116350.1;Parent=gene-C9F00_RS04995;Dbxref=GenBank:WP_001116350.1;Name=WP_001116350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9F00_RS04995;product=YchO/YchP family invasin;protein_id=WP_001116350.1;transl_table=11
##sequence-region NZ_PYKC01000139.1 1 53142
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000139.1	RefSeq	region	1	53142	.	+	.	ID=NZ_PYKC01000139.1:1..53142;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000139.1	RefSeq	pseudogene	1	175	.	+	.	ID=gene-C9F00_RS21085;Name=C9F00_RS21085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS21085;old_locus_tag=C9F00_21570;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000139.1	Protein Homology	CDS	1	175	.	+	1	ID=cds-C9F00_RS21085;Parent=gene-C9F00_RS21085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9F00_RS21085;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	175	1014	.	+	.	ID=gene-C9F00_RS21090;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9F00_RS21090;old_locus_tag=C9F00_21575
NZ_PYKC01000139.1	Protein Homology	CDS	175	1014	.	+	0	ID=cds-WP_135492498.1;Parent=gene-C9F00_RS21090;Dbxref=GenBank:WP_135492498.1;Name=WP_135492498.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9F00_RS21090;product=fimbrial adhesin StfH;protein_id=WP_135492498.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	1122	2402	.	-	.	ID=gene-C9F00_RS21095;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9F00_RS21095;old_locus_tag=C9F00_21580
NZ_PYKC01000139.1	Protein Homology	CDS	1122	2402	.	-	0	ID=cds-WP_135369500.1;Parent=gene-C9F00_RS21095;Dbxref=GenBank:WP_135369500.1;Name=WP_135369500.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F00_RS21095;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_135369500.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	2572	3993	.	+	.	ID=gene-C9F00_RS21100;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9F00_RS21100;old_locus_tag=C9F00_21585
NZ_PYKC01000139.1	Protein Homology	CDS	2572	3993	.	+	0	ID=cds-WP_000845428.1;Parent=gene-C9F00_RS21100;Dbxref=GenBank:WP_000845428.1;Name=WP_000845428.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9F00_RS21100;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845428.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	4075	4419	.	+	.	ID=gene-C9F00_RS21105;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9F00_RS21105;old_locus_tag=C9F00_21590
NZ_PYKC01000139.1	Protein Homology	CDS	4075	4419	.	+	0	ID=cds-WP_001278668.1;Parent=gene-C9F00_RS21105;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9F00_RS21105;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	4520	5143	.	-	.	ID=gene-C9F00_RS21110;Name=C9F00_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21110;old_locus_tag=C9F00_21595
NZ_PYKC01000139.1	Protein Homology	CDS	4520	5143	.	-	0	ID=cds-WP_000964234.1;Parent=gene-C9F00_RS21110;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9F00_RS21110;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	5180	5980	.	-	.	ID=gene-C9F00_RS21115;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9F00_RS21115;old_locus_tag=C9F00_21600
NZ_PYKC01000139.1	Protein Homology	CDS	5180	5980	.	-	0	ID=cds-WP_001118838.1;Parent=gene-C9F00_RS21115;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9F00_RS21115;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	5973	6671	.	-	.	ID=gene-C9F00_RS21120;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9F00_RS21120;old_locus_tag=C9F00_21605
NZ_PYKC01000139.1	Protein Homology	CDS	5973	6671	.	-	0	ID=cds-WP_000689822.1;Parent=gene-C9F00_RS21120;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9F00_RS21120;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	6756	8273	.	+	.	ID=gene-C9F00_RS21125;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9F00_RS21125;old_locus_tag=C9F00_21610
NZ_PYKC01000139.1	Protein Homology	CDS	6756	8273	.	+	0	ID=cds-WP_000146455.1;Parent=gene-C9F00_RS21125;Dbxref=GenBank:WP_000146455.1;Name=WP_000146455.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9F00_RS21125;product=dGTPase;protein_id=WP_000146455.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	8403	9830	.	+	.	ID=gene-C9F00_RS21130;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9F00_RS21130;old_locus_tag=C9F00_21615
NZ_PYKC01000139.1	Protein Homology	CDS	8403	9830	.	+	0	ID=cds-WP_000753958.1;Parent=gene-C9F00_RS21130;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9F00_RS21130;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	9983	11140	.	+	.	ID=gene-C9F00_RS21135;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9F00_RS21135;old_locus_tag=C9F00_21620
NZ_PYKC01000139.1	Protein Homology	CDS	9983	11140	.	+	0	ID=cds-WP_000929420.1;Parent=gene-C9F00_RS21135;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9F00_RS21135;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	11229	11615	.	-	.	ID=gene-C9F00_RS21140;Name=C9F00_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21140;old_locus_tag=C9F00_21625
NZ_PYKC01000139.1	Protein Homology	CDS	11229	11615	.	-	0	ID=cds-WP_000272193.1;Parent=gene-C9F00_RS21140;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9F00_RS21140;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	11862	13163	.	+	.	ID=gene-C9F00_RS21145;Name=C9F00_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21145;old_locus_tag=C9F00_21630
NZ_PYKC01000139.1	Protein Homology	CDS	11862	13163	.	+	0	ID=cds-WP_079903188.1;Parent=gene-C9F00_RS21145;Dbxref=GenBank:WP_079903188.1;Name=WP_079903188.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F00_RS21145;product=MFS transporter;protein_id=WP_079903188.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	13200	14024	.	-	.	ID=gene-C9F00_RS21150;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9F00_RS21150;old_locus_tag=C9F00_21635
NZ_PYKC01000139.1	Protein Homology	CDS	13200	14024	.	-	0	ID=cds-WP_001186673.1;Parent=gene-C9F00_RS21150;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9F00_RS21150;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	14054	16726	.	-	.	ID=gene-C9F00_RS21155;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9F00_RS21155;old_locus_tag=C9F00_21640
NZ_PYKC01000139.1	Protein Homology	CDS	14054	16726	.	-	0	ID=cds-WP_001094519.1;Parent=gene-C9F00_RS21155;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9F00_RS21155;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	16964	17758	.	-	.	ID=gene-C9F00_RS21160;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9F00_RS21160;old_locus_tag=C9F00_21650
NZ_PYKC01000139.1	Protein Homology	CDS	16964	17758	.	-	0	ID=cds-WP_001018214.1;Parent=gene-C9F00_RS21160;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9F00_RS21160;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	18209	18934	.	+	.	ID=gene-C9F00_RS21165;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9F00_RS21165;old_locus_tag=C9F00_21655
NZ_PYKC01000139.1	Protein Homology	CDS	18209	18934	.	+	0	ID=cds-WP_000246886.1;Parent=gene-C9F00_RS21165;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9F00_RS21165;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	19192	20043	.	+	.	ID=gene-C9F00_RS21170;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9F00_RS21170;old_locus_tag=C9F00_21665
NZ_PYKC01000139.1	Protein Homology	CDS	19192	20043	.	+	0	ID=cds-WP_000808106.1;Parent=gene-C9F00_RS21170;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9F00_RS21170;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	20188	20913	.	+	.	ID=gene-C9F00_RS21175;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9F00_RS21175;old_locus_tag=C9F00_21670
NZ_PYKC01000139.1	Protein Homology	CDS	20188	20913	.	+	0	ID=cds-WP_000224567.1;Parent=gene-C9F00_RS21175;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9F00_RS21175;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	21060	21617	.	+	.	ID=gene-C9F00_RS21180;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9F00_RS21180;old_locus_tag=C9F00_21675
NZ_PYKC01000139.1	Protein Homology	CDS	21060	21617	.	+	0	ID=cds-WP_000622423.1;Parent=gene-C9F00_RS21180;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F00_RS21180;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	pseudogene	21758	22954	.	+	.	ID=gene-C9F00_RS21185;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=pseudogene;locus_tag=C9F00_RS21185;old_locus_tag=C9F00_21680;pseudo=true
NZ_PYKC01000139.1	Protein Homology	CDS	21758	22954	.	+	0	ID=cds-C9F00_RS21185;Parent=gene-C9F00_RS21185;Note=internal stop;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9F00_RS21185;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;pseudo=true;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	23267	24025	.	+	.	ID=gene-C9F00_RS21190;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9F00_RS21190;old_locus_tag=C9F00_21690
NZ_PYKC01000139.1	Protein Homology	CDS	23267	24025	.	+	0	ID=cds-WP_000947413.1;Parent=gene-C9F00_RS21190;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9F00_RS21190;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	24038	24895	.	+	.	ID=gene-C9F00_RS21195;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9F00_RS21195;old_locus_tag=C9F00_21695
NZ_PYKC01000139.1	Protein Homology	CDS	24038	24895	.	+	0	ID=cds-WP_000922422.1;Parent=gene-C9F00_RS21195;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9F00_RS21195;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	24907	26259	.	+	.	ID=gene-C9F00_RS21200;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9F00_RS21200;old_locus_tag=C9F00_21700
NZ_PYKC01000139.1	Protein Homology	CDS	24907	26259	.	+	0	ID=cds-WP_000949017.1;Parent=gene-C9F00_RS21200;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9F00_RS21200;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	26291	28702	.	+	.	ID=gene-C9F00_RS21205;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9F00_RS21205;old_locus_tag=C9F00_21705
NZ_PYKC01000139.1	Protein Homology	CDS	26291	28702	.	+	0	ID=cds-WP_135492500.1;Parent=gene-C9F00_RS21205;Dbxref=GenBank:WP_135492500.1;Name=WP_135492500.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=C9F00_RS21205;product=outer membrane protein assembly factor BamA;protein_id=WP_135492500.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	28825	29310	.	+	.	ID=gene-C9F00_RS21210;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9F00_RS21210;old_locus_tag=C9F00_21710
NZ_PYKC01000139.1	Protein Homology	CDS	28825	29310	.	+	0	ID=cds-WP_000758966.1;Parent=gene-C9F00_RS21210;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9F00_RS21210;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	29314	30339	.	+	.	ID=gene-C9F00_RS21215;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9F00_RS21215;old_locus_tag=C9F00_21715
NZ_PYKC01000139.1	Protein Homology	CDS	29314	30339	.	+	0	ID=cds-WP_001139265.1;Parent=gene-C9F00_RS21215;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9F00_RS21215;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	30445	30900	.	+	.	ID=gene-C9F00_RS21220;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9F00_RS21220;old_locus_tag=C9F00_21720
NZ_PYKC01000139.1	Protein Homology	CDS	30445	30900	.	+	0	ID=cds-WP_000210741.1;Parent=gene-C9F00_RS21220;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9F00_RS21220;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	30904	31692	.	+	.	ID=gene-C9F00_RS21225;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9F00_RS21225;old_locus_tag=C9F00_21725
NZ_PYKC01000139.1	Protein Homology	CDS	30904	31692	.	+	0	ID=cds-WP_000565950.1;Parent=gene-C9F00_RS21225;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9F00_RS21225;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	31692	32840	.	+	.	ID=gene-C9F00_RS21230;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9F00_RS21230;old_locus_tag=C9F00_21730
NZ_PYKC01000139.1	Protein Homology	CDS	31692	32840	.	+	0	ID=cds-WP_135369501.1;Parent=gene-C9F00_RS21230;Dbxref=GenBank:WP_135369501.1;Name=WP_135369501.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9F00_RS21230;product=lipid-A-disaccharide synthase;protein_id=WP_135369501.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	32837	33433	.	+	.	ID=gene-C9F00_RS21235;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9F00_RS21235;old_locus_tag=C9F00_21735
NZ_PYKC01000139.1	Protein Homology	CDS	32837	33433	.	+	0	ID=cds-WP_000569412.1;Parent=gene-C9F00_RS21235;Dbxref=GenBank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9F00_RS21235;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	33457	36939	.	+	.	ID=gene-C9F00_RS21240;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9F00_RS21240;old_locus_tag=C9F00_21740
NZ_PYKC01000139.1	Protein Homology	CDS	33457	36939	.	+	0	ID=cds-WP_135492502.1;Parent=gene-C9F00_RS21240;Dbxref=GenBank:WP_135492502.1;Name=WP_135492502.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=C9F00_RS21240;product=DNA polymerase III subunit alpha;protein_id=WP_135492502.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	36952	37911	.	+	.	ID=gene-C9F00_RS21245;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9F00_RS21245;old_locus_tag=C9F00_21745
NZ_PYKC01000139.1	Protein Homology	CDS	36952	37911	.	+	0	ID=cds-WP_000055753.1;Parent=gene-C9F00_RS21245;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F00_RS21245;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	38091	39854	.	+	.	ID=gene-C9F00_RS21250;Name=C9F00_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21250;old_locus_tag=C9F00_21750
NZ_PYKC01000139.1	Protein Homology	CDS	38091	39854	.	+	0	ID=cds-WP_000524168.1;Parent=gene-C9F00_RS21250;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9F00_RS21250;product=chitinase;protein_id=WP_000524168.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	39930	42071	.	+	.	ID=gene-C9F00_RS21255;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9F00_RS21255;old_locus_tag=C9F00_21755
NZ_PYKC01000139.1	Protein Homology	CDS	39930	42071	.	+	0	ID=cds-WP_135369503.1;Parent=gene-C9F00_RS21255;Dbxref=GenBank:WP_135369503.1;Name=WP_135369503.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9F00_RS21255;product=lysine decarboxylase LdcC;protein_id=WP_135369503.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	42127	42516	.	+	.	ID=gene-C9F00_RS21260;Name=C9F00_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21260;old_locus_tag=C9F00_21760
NZ_PYKC01000139.1	Protein Homology	CDS	42127	42516	.	+	0	ID=cds-WP_000901088.1;Parent=gene-C9F00_RS21260;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9F00_RS21260;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	42579	43871	.	+	.	ID=gene-C9F00_RS21265;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9F00_RS21265;old_locus_tag=C9F00_21765
NZ_PYKC01000139.1	Protein Homology	CDS	42579	43871	.	+	0	ID=cds-WP_135369504.1;Parent=gene-C9F00_RS21265;Dbxref=GenBank:WP_135369504.1;Name=WP_135369504.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9F00_RS21265;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_135369504.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	43955	44215	.	-	.	ID=gene-C9F00_RS21270;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9F00_RS21270;old_locus_tag=C9F00_21770
NZ_PYKC01000139.1	Protein Homology	CDS	43955	44215	.	-	0	ID=cds-WP_000062330.1;Parent=gene-C9F00_RS21270;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9F00_RS21270;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	44202	44402	.	-	.	ID=gene-C9F00_RS21275;Name=C9F00_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21275;old_locus_tag=C9F00_21775
NZ_PYKC01000139.1	Protein Homology	CDS	44202	44402	.	-	0	ID=cds-WP_001518678.1;Parent=gene-C9F00_RS21275;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9F00_RS21275;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	44600	45145	.	+	.	ID=gene-C9F00_RS21280;Name=C9F00_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21280;old_locus_tag=C9F00_21780
NZ_PYKC01000139.1	Protein Homology	CDS	44600	45145	.	+	0	ID=cds-WP_001185319.1;Parent=gene-C9F00_RS21280;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9F00_RS21280;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	45142	45564	.	+	.	ID=gene-C9F00_RS21285;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9F00_RS21285;old_locus_tag=C9F00_21785
NZ_PYKC01000139.1	Protein Homology	CDS	45142	45564	.	+	0	ID=cds-WP_000560527.1;Parent=gene-C9F00_RS21285;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9F00_RS21285;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	45596	46297	.	+	.	ID=gene-C9F00_RS21290;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9F00_RS21290;old_locus_tag=C9F00_21790
NZ_PYKC01000139.1	Protein Homology	CDS	45596	46297	.	+	0	ID=cds-WP_000252576.1;Parent=gene-C9F00_RS21290;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9F00_RS21290;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	46371	48089	.	-	.	ID=gene-C9F00_RS21295;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9F00_RS21295;old_locus_tag=C9F00_21795
NZ_PYKC01000139.1	Protein Homology	CDS	46371	48089	.	-	0	ID=cds-WP_001260687.1;Parent=gene-C9F00_RS21295;Dbxref=GenBank:WP_001260687.1;Name=WP_001260687.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9F00_RS21295;product=proline--tRNA ligase;protein_id=WP_001260687.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	48200	48907	.	-	.	ID=gene-C9F00_RS21300;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9F00_RS21300;old_locus_tag=C9F00_21800
NZ_PYKC01000139.1	Protein Homology	CDS	48200	48907	.	-	0	ID=cds-WP_000093988.1;Parent=gene-C9F00_RS21300;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9F00_RS21300;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	48904	49308	.	-	.	ID=gene-C9F00_RS21305;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9F00_RS21305;old_locus_tag=C9F00_21805
NZ_PYKC01000139.1	Protein Homology	CDS	48904	49308	.	-	0	ID=cds-WP_001202315.1;Parent=gene-C9F00_RS21305;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9F00_RS21305;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	49427	50242	.	-	.	ID=gene-C9F00_RS21310;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9F00_RS21310;old_locus_tag=C9F00_21810
NZ_PYKC01000139.1	Protein Homology	CDS	49427	50242	.	-	0	ID=cds-WP_000874215.1;Parent=gene-C9F00_RS21310;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9F00_RS21310;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	50281	50934	.	-	.	ID=gene-C9F00_RS21315;Name=C9F00_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21315;old_locus_tag=C9F00_21815
NZ_PYKC01000139.1	Protein Homology	CDS	50281	50934	.	-	0	ID=cds-WP_001287486.1;Parent=gene-C9F00_RS21315;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9F00_RS21315;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	50927	51958	.	-	.	ID=gene-C9F00_RS21320;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9F00_RS21320;old_locus_tag=C9F00_21820
NZ_PYKC01000139.1	Protein Homology	CDS	50927	51958	.	-	0	ID=cds-WP_000594018.1;Parent=gene-C9F00_RS21320;Dbxref=GenBank:WP_000594018.1;Name=WP_000594018.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9F00_RS21320;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594018.1;transl_table=11
NZ_PYKC01000139.1	RefSeq	gene	52148	52714	.	+	.	ID=gene-C9F00_RS21325;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9F00_RS21325;old_locus_tag=C9F00_21825
NZ_PYKC01000139.1	Protein Homology	CDS	52148	52714	.	+	0	ID=cds-WP_135369505.1;Parent=gene-C9F00_RS21325;Dbxref=GenBank:WP_135369505.1;Name=WP_135369505.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9F00_RS21325;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_135369505.1;transl_table=11
##sequence-region NZ_PYKC01000062.1 1 135188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000062.1	RefSeq	region	1	135188	.	+	.	ID=NZ_PYKC01000062.1:1..135188;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000062.1	RefSeq	gene	1	564	.	-	.	ID=gene-C9F00_RS10610;Name=C9F00_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10610;old_locus_tag=C9F00_10860;partial=true;start_range=.,1
NZ_PYKC01000062.1	Protein Homology	CDS	1	564	.	-	0	ID=cds-WP_135492284.1;Parent=gene-C9F00_RS10610;Dbxref=GenBank:WP_135492284.1;Name=WP_135492284.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9F00_RS10610;partial=true;product=D-serine ammonia-lyase;protein_id=WP_135492284.1;start_range=.,1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	582	1919	.	-	.	ID=gene-C9F00_RS10615;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=C9F00_RS10615;old_locus_tag=C9F00_10865
NZ_PYKC01000062.1	Protein Homology	CDS	582	1919	.	-	0	ID=cds-WP_135369753.1;Parent=gene-C9F00_RS10615;Dbxref=GenBank:WP_135369753.1;Name=WP_135369753.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9F00_RS10615;product=D-serine transporter DsdX;protein_id=WP_135369753.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	2145	3068	.	+	.	ID=gene-C9F00_RS10620;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9F00_RS10620;old_locus_tag=C9F00_10870
NZ_PYKC01000062.1	Protein Homology	CDS	2145	3068	.	+	0	ID=cds-WP_061375735.1;Parent=gene-C9F00_RS10620;Dbxref=GenBank:WP_061375735.1;Name=WP_061375735.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9F00_RS10620;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_061375735.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	3132	4217	.	+	.	ID=gene-C9F00_RS10625;Name=C9F00_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10625;old_locus_tag=C9F00_10875
NZ_PYKC01000062.1	Protein Homology	CDS	3132	4217	.	+	0	ID=cds-WP_000238928.1;Parent=gene-C9F00_RS10625;Dbxref=GenBank:WP_000238928.1;Name=WP_000238928.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9F00_RS10625;product=cellulase family glycosylhydrolase;protein_id=WP_000238928.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	4144	5328	.	-	.	ID=gene-C9F00_RS10630;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9F00_RS10630;old_locus_tag=C9F00_10880
NZ_PYKC01000062.1	Protein Homology	CDS	4144	5328	.	-	0	ID=cds-WP_000828744.1;Parent=gene-C9F00_RS10630;Dbxref=GenBank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9F00_RS10630;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	5531	6391	.	-	.	ID=gene-C9F00_RS10635;Name=C9F00_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10635;old_locus_tag=C9F00_10885
NZ_PYKC01000062.1	Protein Homology	CDS	5531	6391	.	-	0	ID=cds-WP_001531658.1;Parent=gene-C9F00_RS10635;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9F00_RS10635;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	6484	6573	.	-	.	ID=gene-C9F00_RS10640;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9F00_RS10640;old_locus_tag=C9F00_10890
NZ_PYKC01000062.1	Protein Homology	CDS	6484	6573	.	-	0	ID=cds-WP_000117642.1;Parent=gene-C9F00_RS10640;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9F00_RS10640;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	6570	6684	.	-	.	ID=gene-C9F00_RS10645;Name=C9F00_RS10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS10645;old_locus_tag=C9F00_10895;pseudo=true
NZ_PYKC01000062.1	Protein Homology	CDS	6570	6684	.	-	0	ID=cds-C9F00_RS10645;Parent=gene-C9F00_RS10645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9F00_RS10645;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	7207	7305	.	+	.	ID=gene-C9F00_RS10650;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9F00_RS10650;old_locus_tag=C9F00_10905
NZ_PYKC01000062.1	Protein Homology	CDS	7207	7305	.	+	0	ID=cds-WP_001541152.1;Parent=gene-C9F00_RS10650;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9F00_RS10650;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	7412	9100	.	+	.	ID=gene-C9F00_RS10655;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9F00_RS10655;old_locus_tag=C9F00_10910
NZ_PYKC01000062.1	Protein Homology	CDS	7412	9100	.	+	0	ID=cds-WP_000168439.1;Parent=gene-C9F00_RS10655;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9F00_RS10655;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	9104	9394	.	+	.	ID=gene-C9F00_RS10660;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9F00_RS10660;old_locus_tag=C9F00_10915
NZ_PYKC01000062.1	Protein Homology	CDS	9104	9394	.	+	0	ID=cds-WP_001171826.1;Parent=gene-C9F00_RS10660;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9F00_RS10660;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	9396	10181	.	-	.	ID=gene-C9F00_RS10665;Name=C9F00_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10665;old_locus_tag=C9F00_10920
NZ_PYKC01000062.1	Protein Homology	CDS	9396	10181	.	-	0	ID=cds-WP_000448638.1;Parent=gene-C9F00_RS10665;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9F00_RS10665;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	10506	11426	.	+	.	ID=gene-C9F00_RS10670;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F00_RS10670;old_locus_tag=C9F00_10925
NZ_PYKC01000062.1	Protein Homology	CDS	10506	11426	.	+	0	ID=cds-WP_000350272.1;Parent=gene-C9F00_RS10670;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9F00_RS10670;product=ribokinase;protein_id=WP_000350272.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	11457	12773	.	+	.	ID=gene-C9F00_RS10675;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F00_RS10675;old_locus_tag=C9F00_10930
NZ_PYKC01000062.1	Protein Homology	CDS	11457	12773	.	+	0	ID=cds-WP_000998358.1;Parent=gene-C9F00_RS10675;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9F00_RS10675;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	12785	13798	.	+	.	ID=gene-C9F00_RS10680;Name=C9F00_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10680;old_locus_tag=C9F00_10935
NZ_PYKC01000062.1	Protein Homology	CDS	12785	13798	.	+	0	ID=cds-WP_020838459.1;Parent=gene-C9F00_RS10680;Dbxref=GenBank:WP_020838459.1;Name=WP_020838459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9F00_RS10680;product=aldose 1-epimerase family protein;protein_id=WP_020838459.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	13873	14463	.	+	.	ID=gene-C9F00_RS10685;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=C9F00_RS10685;old_locus_tag=C9F00_10940
NZ_PYKC01000062.1	Protein Homology	CDS	13873	14463	.	+	0	ID=cds-WP_000633672.1;Parent=gene-C9F00_RS10685;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9F00_RS10685;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	14463	15965	.	+	.	ID=gene-C9F00_RS10690;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9F00_RS10690;old_locus_tag=C9F00_10945
NZ_PYKC01000062.1	Protein Homology	CDS	14463	15965	.	+	0	ID=cds-WP_001091257.1;Parent=gene-C9F00_RS10690;Dbxref=GenBank:WP_001091257.1;Name=WP_001091257.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9F00_RS10690;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091257.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	15975	17303	.	+	.	ID=gene-C9F00_RS10695;Name=C9F00_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10695;old_locus_tag=C9F00_10950
NZ_PYKC01000062.1	Protein Homology	CDS	15975	17303	.	+	0	ID=cds-WP_000948164.1;Parent=gene-C9F00_RS10695;Dbxref=GenBank:WP_000948164.1;Name=WP_000948164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9F00_RS10695;product=MFS transporter;protein_id=WP_000948164.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	17446	18837	.	+	.	ID=gene-C9F00_RS10700;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9F00_RS10700;old_locus_tag=C9F00_10955
NZ_PYKC01000062.1	Protein Homology	CDS	17446	18837	.	+	0	ID=cds-WP_000879181.1;Parent=gene-C9F00_RS10700;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9F00_RS10700;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	19030	19482	.	+	.	ID=gene-C9F00_RS10705;Name=C9F00_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10705;old_locus_tag=C9F00_10960
NZ_PYKC01000062.1	Protein Homology	CDS	19030	19482	.	+	0	ID=cds-WP_001519640.1;Parent=gene-C9F00_RS10705;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9F00_RS10705;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	19835	20578	.	+	.	ID=gene-C9F00_RS10710;Name=C9F00_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10710;old_locus_tag=C9F00_10965
NZ_PYKC01000062.1	Protein Homology	CDS	19835	20578	.	+	0	ID=cds-WP_135369754.1;Parent=gene-C9F00_RS10710;Dbxref=GenBank:WP_135369754.1;Name=WP_135369754.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9F00_RS10710;product=GntR family transcriptional regulator;protein_id=WP_135369754.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	20596	21069	.	+	.	ID=gene-C9F00_RS10715;Name=C9F00_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10715;old_locus_tag=C9F00_10970
NZ_PYKC01000062.1	Protein Homology	CDS	20596	21069	.	+	0	ID=cds-WP_001152234.1;Parent=gene-C9F00_RS10715;Dbxref=GenBank:WP_001152234.1;Name=WP_001152234.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9F00_RS10715;product=PTS sugar transporter subunit IIA;protein_id=WP_001152234.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	21066	21353	.	+	.	ID=gene-C9F00_RS10720;Name=C9F00_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10720;old_locus_tag=C9F00_10975
NZ_PYKC01000062.1	Protein Homology	CDS	21066	21353	.	+	0	ID=cds-WP_000041396.1;Parent=gene-C9F00_RS10720;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9F00_RS10720;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	21429	22787	.	+	.	ID=gene-C9F00_RS10725;Name=C9F00_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10725;old_locus_tag=C9F00_10980
NZ_PYKC01000062.1	Protein Homology	CDS	21429	22787	.	+	0	ID=cds-WP_000997824.1;Parent=gene-C9F00_RS10725;Dbxref=GenBank:WP_000997824.1;Name=WP_000997824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9F00_RS10725;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997824.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	22780	24264	.	+	.	ID=gene-C9F00_RS10730;Name=C9F00_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10730;old_locus_tag=C9F00_10985
NZ_PYKC01000062.1	Protein Homology	CDS	22780	24264	.	+	0	ID=cds-WP_135369755.1;Parent=gene-C9F00_RS10730;Dbxref=GenBank:WP_135369755.1;Name=WP_135369755.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9F00_RS10730;product=FGGY-family carbohydrate kinase;protein_id=WP_135369755.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	24327	25187	.	+	.	ID=gene-C9F00_RS10735;Name=C9F00_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10735;old_locus_tag=C9F00_10990
NZ_PYKC01000062.1	Protein Homology	CDS	24327	25187	.	+	0	ID=cds-WP_001131802.1;Parent=gene-C9F00_RS10735;Dbxref=GenBank:WP_001131802.1;Name=WP_001131802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F00_RS10735;product=class II aldolase;protein_id=WP_001131802.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	25197	25466	.	+	.	ID=gene-C9F00_RS10740;Name=C9F00_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10740;old_locus_tag=C9F00_10995
NZ_PYKC01000062.1	Protein Homology	CDS	25197	25466	.	+	0	ID=cds-WP_135369756.1;Parent=gene-C9F00_RS10740;Dbxref=GenBank:WP_135369756.1;Name=WP_135369756.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9F00_RS10740;product=HPr family phosphocarrier protein;protein_id=WP_135369756.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	25557	25880	.	-	.	ID=gene-C9F00_RS10745;Name=C9F00_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10745;old_locus_tag=C9F00_11000
NZ_PYKC01000062.1	Protein Homology	CDS	25557	25880	.	-	0	ID=cds-WP_001274841.1;Parent=gene-C9F00_RS10745;Dbxref=GenBank:WP_001274841.1;Name=WP_001274841.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9F00_RS10745;product=helix-turn-helix domain-containing protein;protein_id=WP_001274841.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	25864	26223	.	-	.	ID=gene-C9F00_RS10750;Name=C9F00_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10750;old_locus_tag=C9F00_11005
NZ_PYKC01000062.1	Protein Homology	CDS	25864	26223	.	-	0	ID=cds-WP_001217956.1;Parent=gene-C9F00_RS10750;Dbxref=GenBank:WP_001217956.1;Name=WP_001217956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9F00_RS10750;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217956.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	26439	27632	.	+	.	ID=gene-C9F00_RS10755;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9F00_RS10755;old_locus_tag=C9F00_11010
NZ_PYKC01000062.1	Protein Homology	CDS	26439	27632	.	+	0	ID=cds-WP_001004796.1;Parent=gene-C9F00_RS10755;Dbxref=GenBank:WP_001004796.1;Name=WP_001004796.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9F00_RS10755;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004796.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	27692	29074	.	-	.	ID=gene-C9F00_RS10760;Name=C9F00_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10760;old_locus_tag=C9F00_11015
NZ_PYKC01000062.1	Protein Homology	CDS	27692	29074	.	-	0	ID=cds-WP_135369757.1;Parent=gene-C9F00_RS10760;Dbxref=GenBank:WP_135369757.1;Name=WP_135369757.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9F00_RS10760;product=glycoside hydrolase family 1 protein;protein_id=WP_135369757.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	29181	29474	.	-	.	ID=gene-C9F00_RS10765;Name=C9F00_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10765;old_locus_tag=C9F00_11020
NZ_PYKC01000062.1	Protein Homology	CDS	29181	29474	.	-	0	ID=cds-WP_135369758.1;Parent=gene-C9F00_RS10765;Dbxref=GenBank:WP_135369758.1;Name=WP_135369758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9F00_RS10765;product=YicS family protein;protein_id=WP_135369758.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	29671	32469	.	+	.	ID=gene-C9F00_RS10770;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F00_RS10770;old_locus_tag=C9F00_11025
NZ_PYKC01000062.1	Protein Homology	CDS	29671	32469	.	+	0	ID=cds-WP_001252672.1;Parent=gene-C9F00_RS10770;Dbxref=GenBank:WP_001252672.1;Name=WP_001252672.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F00_RS10770;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	32688	33113	.	+	.	ID=gene-C9F00_RS10775;Name=C9F00_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10775;old_locus_tag=C9F00_11030
NZ_PYKC01000062.1	Protein Homology	CDS	32688	33113	.	+	0	ID=cds-WP_000214106.1;Parent=gene-C9F00_RS10775;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9F00_RS10775;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	33124	33609	.	+	.	ID=gene-C9F00_RS10780;Name=C9F00_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10780;old_locus_tag=C9F00_11035
NZ_PYKC01000062.1	Protein Homology	CDS	33124	33609	.	+	0	ID=cds-WP_001284295.1;Parent=gene-C9F00_RS10780;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9F00_RS10780;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	33755	34504	.	+	.	ID=gene-C9F00_RS10785;Name=C9F00_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10785;old_locus_tag=C9F00_11040
NZ_PYKC01000062.1	Protein Homology	CDS	33755	34504	.	+	0	ID=cds-WP_000380259.1;Parent=gene-C9F00_RS10785;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9F00_RS10785;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	34501	35361	.	+	.	ID=gene-C9F00_RS10790;Name=C9F00_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10790;old_locus_tag=C9F00_11045
NZ_PYKC01000062.1	Protein Homology	CDS	34501	35361	.	+	0	ID=cds-WP_001526325.1;Parent=gene-C9F00_RS10790;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9F00_RS10790;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	35365	36474	.	+	.	ID=gene-C9F00_RS10795;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9F00_RS10795;old_locus_tag=C9F00_11050
NZ_PYKC01000062.1	Protein Homology	CDS	35365	36474	.	+	0	ID=cds-WP_000188468.1;Parent=gene-C9F00_RS10795;Dbxref=GenBank:WP_000188468.1;Name=WP_000188468.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9F00_RS10795;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188468.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	36461	37204	.	+	.	ID=gene-C9F00_RS10800;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9F00_RS10800;old_locus_tag=C9F00_11055
NZ_PYKC01000062.1	Protein Homology	CDS	36461	37204	.	+	0	ID=cds-WP_001186147.1;Parent=gene-C9F00_RS10800;Dbxref=GenBank:WP_001186147.1;Name=WP_001186147.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9F00_RS10800;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186147.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	37440	38369	.	+	.	ID=gene-C9F00_RS10805;Name=C9F00_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10805;old_locus_tag=C9F00_11060
NZ_PYKC01000062.1	Protein Homology	CDS	37440	38369	.	+	0	ID=cds-WP_000749536.1;Parent=gene-C9F00_RS10805;Dbxref=GenBank:WP_000749536.1;Name=WP_000749536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9F00_RS10805;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749536.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	38412	39314	.	-	.	ID=gene-C9F00_RS10810;Name=C9F00_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10810;old_locus_tag=C9F00_11065
NZ_PYKC01000062.1	Protein Homology	CDS	38412	39314	.	-	0	ID=cds-WP_000535970.1;Parent=gene-C9F00_RS10810;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9F00_RS10810;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	39820	40515	.	+	.	ID=gene-C9F00_RS10815;Name=C9F00_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10815;old_locus_tag=C9F00_11070
NZ_PYKC01000062.1	Protein Homology	CDS	39820	40515	.	+	0	ID=cds-WP_000392697.1;Parent=gene-C9F00_RS10815;Dbxref=GenBank:WP_000392697.1;Name=WP_000392697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9F00_RS10815;product=MgtC family protein;protein_id=WP_000392697.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	40734	43460	.	+	.	ID=gene-C9F00_RS10820;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F00_RS10820;old_locus_tag=C9F00_11075
NZ_PYKC01000062.1	Protein Homology	CDS	40734	43460	.	+	0	ID=cds-WP_000131299.1;Parent=gene-C9F00_RS10820;Dbxref=GenBank:WP_000131299.1;Name=WP_000131299.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9F00_RS10820;product=magnesium-translocating P-type ATPase;protein_id=WP_000131299.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	43482	43574	.	+	.	ID=gene-C9F00_RS10825;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9F00_RS10825;old_locus_tag=C9F00_11080
NZ_PYKC01000062.1	Protein Homology	CDS	43482	43574	.	+	0	ID=cds-WP_001082117.1;Parent=gene-C9F00_RS10825;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9F00_RS10825;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	43587	43673	.	+	.	ID=gene-C9F00_RS24650;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9F00_RS24650
NZ_PYKC01000062.1	Protein Homology	CDS	43587	43673	.	+	0	ID=cds-WP_252515021.1;Parent=gene-C9F00_RS24650;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9F00_RS24650;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	43775	44254	.	+	.	ID=gene-C9F00_RS10830;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9F00_RS10830;old_locus_tag=C9F00_11085
NZ_PYKC01000062.1	Protein Homology	CDS	43775	44254	.	+	0	ID=cds-WP_001065328.1;Parent=gene-C9F00_RS10830;Dbxref=GenBank:WP_001065328.1;Name=WP_001065328.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9F00_RS10830;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065328.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	44422	45102	.	-	.	ID=gene-C9F00_RS10835;Name=C9F00_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10835;old_locus_tag=C9F00_11090
NZ_PYKC01000062.1	Protein Homology	CDS	44422	45102	.	-	0	ID=cds-WP_000106461.1;Parent=gene-C9F00_RS10835;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=C9F00_RS10835;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	45886	46743	.	+	.	ID=gene-C9F00_RS10845;Name=C9F00_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10845;old_locus_tag=C9F00_11100
NZ_PYKC01000062.1	Protein Homology	CDS	45886	46743	.	+	0	ID=cds-WP_135369318.1;Parent=gene-C9F00_RS10845;Dbxref=GenBank:WP_135369318.1;Name=WP_135369318.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9F00_RS10845;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369318.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	46754	47218	.	+	.	ID=gene-C9F00_RS10850;Name=C9F00_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10850;old_locus_tag=C9F00_11105
NZ_PYKC01000062.1	Protein Homology	CDS	46754	47218	.	+	0	ID=cds-WP_001521985.1;Parent=gene-C9F00_RS10850;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9F00_RS10850;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	47313	50165	.	-	.	ID=gene-C9F00_RS10855;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9F00_RS10855;old_locus_tag=C9F00_11110
NZ_PYKC01000062.1	Protein Homology	CDS	47313	50165	.	-	0	ID=cds-WP_135369317.1;Parent=gene-C9F00_RS10855;Dbxref=GenBank:WP_135369317.1;Name=WP_135369317.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9F00_RS10855;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_135369317.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	50240	50857	.	-	.	ID=gene-C9F00_RS10860;Name=C9F00_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10860;old_locus_tag=C9F00_11115
NZ_PYKC01000062.1	Protein Homology	CDS	50240	50857	.	-	0	ID=cds-WP_000984812.1;Parent=gene-C9F00_RS10860;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9F00_RS10860;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	51614	51724	.	-	.	ID=gene-C9F00_RS24420;Name=C9F00_RS24420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24420;partial=true;pseudo=true;start_range=.,51614
NZ_PYKC01000062.1	Protein Homology	CDS	51614	51724	.	-	0	ID=cds-C9F00_RS24420;Parent=gene-C9F00_RS24420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=C9F00_RS24420;partial=true;product=transposase;pseudo=true;start_range=.,51614;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	52364	52619	.	+	.	ID=gene-C9F00_RS10865;Name=C9F00_RS10865;end_range=52619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS10865;old_locus_tag=C9F00_11120;partial=true;pseudo=true
NZ_PYKC01000062.1	Protein Homology	CDS	52364	52619	.	+	0	ID=cds-C9F00_RS10865;Parent=gene-C9F00_RS10865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=52619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=C9F00_RS10865;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	53009	53638	.	+	.	ID=gene-C9F00_RS10870;Name=C9F00_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10870;old_locus_tag=C9F00_11125
NZ_PYKC01000062.1	Protein Homology	CDS	53009	53638	.	+	0	ID=cds-WP_023200971.1;Parent=gene-C9F00_RS10870;Dbxref=GenBank:WP_023200971.1;Name=WP_023200971.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=C9F00_RS10870;product=fimbrial protein;protein_id=WP_023200971.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	53782	54525	.	+	.	ID=gene-C9F00_RS10875;Name=C9F00_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10875;old_locus_tag=C9F00_11130
NZ_PYKC01000062.1	Protein Homology	CDS	53782	54525	.	+	0	ID=cds-WP_000882257.1;Parent=gene-C9F00_RS10875;Dbxref=GenBank:WP_000882257.1;Name=WP_000882257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=C9F00_RS10875;product=fimbrial chaperone;protein_id=WP_000882257.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	54546	57146	.	+	.	ID=gene-C9F00_RS10880;Name=C9F00_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10880;old_locus_tag=C9F00_11135
NZ_PYKC01000062.1	Protein Homology	CDS	54546	57146	.	+	0	ID=cds-WP_135369672.1;Parent=gene-C9F00_RS10880;Dbxref=GenBank:WP_135369672.1;Name=WP_135369672.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=C9F00_RS10880;product=outer membrane usher protein;protein_id=WP_135369672.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	57160	57744	.	+	.	ID=gene-C9F00_RS10885;Name=C9F00_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10885;old_locus_tag=C9F00_11140
NZ_PYKC01000062.1	Protein Homology	CDS	57160	57744	.	+	0	ID=cds-WP_023243747.1;Parent=gene-C9F00_RS10885;Dbxref=GenBank:WP_023243747.1;Name=WP_023243747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=C9F00_RS10885;product=fimbrial protein;protein_id=WP_023243747.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	57759	58367	.	+	.	ID=gene-C9F00_RS10890;Name=C9F00_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10890;old_locus_tag=C9F00_11145
NZ_PYKC01000062.1	Protein Homology	CDS	57759	58367	.	+	0	ID=cds-WP_001080417.1;Parent=gene-C9F00_RS10890;Dbxref=GenBank:WP_001080417.1;Name=WP_001080417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=C9F00_RS10890;product=fimbrial protein;protein_id=WP_001080417.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	58383	58976	.	+	.	ID=gene-C9F00_RS10895;Name=C9F00_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10895;old_locus_tag=C9F00_11150
NZ_PYKC01000062.1	Protein Homology	CDS	58383	58976	.	+	0	ID=cds-WP_135369671.1;Parent=gene-C9F00_RS10895;Dbxref=GenBank:WP_135369671.1;Name=WP_135369671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9F00_RS10895;product=fimbrial-like protein;protein_id=WP_135369671.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	59000	60229	.	+	.	ID=gene-C9F00_RS10900;Name=C9F00_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10900;old_locus_tag=C9F00_11155
NZ_PYKC01000062.1	Protein Homology	CDS	59000	60229	.	+	0	ID=cds-WP_135369670.1;Parent=gene-C9F00_RS10900;Dbxref=GenBank:WP_135369670.1;Name=WP_135369670.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=C9F00_RS10900;product=fimbrial protein;protein_id=WP_135369670.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	60573	60707	.	+	.	ID=gene-C9F00_RS24815;Name=C9F00_RS24815;end_range=60707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24815;partial=true;pseudo=true
NZ_PYKC01000062.1	Protein Homology	CDS	60573	60707	.	+	0	ID=cds-C9F00_RS24815;Parent=gene-C9F00_RS24815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=60707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149226.1;locus_tag=C9F00_RS24815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	60812	60982	.	-	.	ID=gene-C9F00_RS10905;Name=C9F00_RS10905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS10905;old_locus_tag=C9F00_11160;partial=true;pseudo=true;start_range=.,60812
NZ_PYKC01000062.1	Protein Homology	CDS	60812	60982	.	-	0	ID=cds-C9F00_RS10905;Parent=gene-C9F00_RS10905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=C9F00_RS10905;partial=true;product=transposase;pseudo=true;start_range=.,60812;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	61033	61191	.	-	.	ID=gene-C9F00_RS24720;Name=C9F00_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24720
NZ_PYKC01000062.1	Protein Homology	CDS	61033	61191	.	-	0	ID=cds-WP_342365454.1;Parent=gene-C9F00_RS24720;Dbxref=GenBank:WP_342365454.1;Name=WP_342365454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9F00_RS24720;product=Arm DNA-binding domain-containing protein;protein_id=WP_342365454.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	61420	61514	.	-	.	ID=gene-C9F00_RS10910;Name=C9F00_RS10910;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS10910;old_locus_tag=C9F00_11165
NZ_PYKC01000062.1	tRNAscan-SE	tRNA	61420	61514	.	-	.	ID=rna-C9F00_RS10910;Parent=gene-C9F00_RS10910;anticodon=(pos:complement(61478..61480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS10910;product=tRNA-Sec
NZ_PYKC01000062.1	tRNAscan-SE	exon	61420	61514	.	-	.	ID=exon-C9F00_RS10910-1;Parent=rna-C9F00_RS10910;anticodon=(pos:complement(61478..61480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS10910;product=tRNA-Sec
NZ_PYKC01000062.1	RefSeq	gene	61802	63184	.	+	.	ID=gene-C9F00_RS10915;Name=C9F00_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10915;old_locus_tag=C9F00_11170
NZ_PYKC01000062.1	Protein Homology	CDS	61802	63184	.	+	0	ID=cds-WP_000834259.1;Parent=gene-C9F00_RS10915;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9F00_RS10915;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	63196	65514	.	+	.	ID=gene-C9F00_RS10920;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9F00_RS10920;old_locus_tag=C9F00_11175
NZ_PYKC01000062.1	Protein Homology	CDS	63196	65514	.	+	0	ID=cds-WP_000703003.1;Parent=gene-C9F00_RS10920;Dbxref=GenBank:WP_000703003.1;Name=WP_000703003.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9F00_RS10920;product=alpha-xylosidase;protein_id=WP_000703003.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	65617	67326	.	-	.	ID=gene-C9F00_RS10925;Name=C9F00_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10925;old_locus_tag=C9F00_11180
NZ_PYKC01000062.1	Protein Homology	CDS	65617	67326	.	-	0	ID=cds-WP_135369669.1;Parent=gene-C9F00_RS10925;Dbxref=GenBank:WP_135369669.1;Name=WP_135369669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9F00_RS10925;product=AsmA family protein;protein_id=WP_135369669.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	67447	68838	.	-	.	ID=gene-C9F00_RS10930;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=C9F00_RS10930;old_locus_tag=C9F00_11185
NZ_PYKC01000062.1	Protein Homology	CDS	67447	68838	.	-	0	ID=cds-WP_135492286.1;Parent=gene-C9F00_RS10930;Dbxref=GenBank:WP_135492286.1;Name=WP_135492286.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9F00_RS10930;product=xanthine/proton symporter XanP;protein_id=WP_135492286.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	69066	70271	.	+	.	ID=gene-C9F00_RS10935;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9F00_RS10935;old_locus_tag=C9F00_11190
NZ_PYKC01000062.1	Protein Homology	CDS	69066	70271	.	+	0	ID=cds-WP_000462250.1;Parent=gene-C9F00_RS10935;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9F00_RS10935;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	70307	72388	.	-	.	ID=gene-C9F00_RS10940;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9F00_RS10940;old_locus_tag=C9F00_11195
NZ_PYKC01000062.1	Protein Homology	CDS	70307	72388	.	-	0	ID=cds-WP_001583320.1;Parent=gene-C9F00_RS10940;Dbxref=GenBank:WP_001583320.1;Name=WP_001583320.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9F00_RS10940;product=ATP-dependent DNA helicase RecG;protein_id=WP_001583320.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	72394	73083	.	-	.	ID=gene-C9F00_RS10945;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9F00_RS10945;old_locus_tag=C9F00_11200
NZ_PYKC01000062.1	Protein Homology	CDS	72394	73083	.	-	0	ID=cds-WP_135369668.1;Parent=gene-C9F00_RS10945;Dbxref=GenBank:WP_135369668.1;Name=WP_135369668.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9F00_RS10945;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_135369668.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	73088	75199	.	-	.	ID=gene-C9F00_RS10950;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9F00_RS10950;old_locus_tag=C9F00_11205
NZ_PYKC01000062.1	Protein Homology	CDS	73088	75199	.	-	0	ID=cds-WP_000280481.1;Parent=gene-C9F00_RS10950;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9F00_RS10950;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	75218	75493	.	-	.	ID=gene-C9F00_RS10955;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9F00_RS10955;old_locus_tag=C9F00_11210
NZ_PYKC01000062.1	Protein Homology	CDS	75218	75493	.	-	0	ID=cds-WP_000135058.1;Parent=gene-C9F00_RS10955;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9F00_RS10955;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	75548	76171	.	-	.	ID=gene-C9F00_RS10960;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9F00_RS10960;old_locus_tag=C9F00_11215
NZ_PYKC01000062.1	Protein Homology	CDS	75548	76171	.	-	0	ID=cds-WP_000046966.1;Parent=gene-C9F00_RS10960;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9F00_RS10960;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	76428	78113	.	+	.	ID=gene-C9F00_RS10965;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9F00_RS10965;old_locus_tag=C9F00_11220
NZ_PYKC01000062.1	Protein Homology	CDS	76428	78113	.	+	0	ID=cds-WP_135369667.1;Parent=gene-C9F00_RS10965;Dbxref=GenBank:WP_135369667.1;Name=WP_135369667.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F00_RS10965;product=NAD-dependent DNA ligase LigB;protein_id=WP_135369667.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	78110	78727	.	-	.	ID=gene-C9F00_RS10970;Name=C9F00_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10970;old_locus_tag=C9F00_11225
NZ_PYKC01000062.1	Protein Homology	CDS	78110	78727	.	-	0	ID=cds-WP_000924334.1;Parent=gene-C9F00_RS10970;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9F00_RS10970;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	78978	79859	.	-	.	ID=gene-C9F00_RS10975;Name=C9F00_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10975;old_locus_tag=C9F00_11230
NZ_PYKC01000062.1	Protein Homology	CDS	78978	79859	.	-	0	ID=cds-WP_135369634.1;Parent=gene-C9F00_RS10975;Dbxref=GenBank:WP_135369634.1;Name=WP_135369634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9F00_RS10975;product=HARLDQ motif MBL-fold protein;protein_id=WP_135369634.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	79933	80835	.	+	.	ID=gene-C9F00_RS10980;Name=C9F00_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10980;old_locus_tag=C9F00_11235
NZ_PYKC01000062.1	Protein Homology	CDS	79933	80835	.	+	0	ID=cds-WP_001748906.1;Parent=gene-C9F00_RS10980;Dbxref=GenBank:WP_001748906.1;Name=WP_001748906.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9F00_RS10980;product=LysR family transcriptional regulator;protein_id=WP_001748906.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	80885	81748	.	-	.	ID=gene-C9F00_RS10985;Name=C9F00_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10985;old_locus_tag=C9F00_11240
NZ_PYKC01000062.1	Protein Homology	CDS	80885	81748	.	-	0	ID=cds-WP_000621352.1;Parent=gene-C9F00_RS10985;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F00_RS10985;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	81874	82590	.	+	.	ID=gene-C9F00_RS10990;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9F00_RS10990;old_locus_tag=C9F00_11250
NZ_PYKC01000062.1	Protein Homology	CDS	81874	82590	.	+	0	ID=cds-WP_001247078.1;Parent=gene-C9F00_RS10990;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9F00_RS10990;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	82669	83310	.	+	.	ID=gene-C9F00_RS10995;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9F00_RS10995;old_locus_tag=C9F00_11255
NZ_PYKC01000062.1	Protein Homology	CDS	82669	83310	.	+	0	ID=cds-WP_000806167.1;Parent=gene-C9F00_RS10995;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9F00_RS10995;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	83388	83984	.	-	.	ID=gene-C9F00_RS11000;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9F00_RS11000;old_locus_tag=C9F00_11260
NZ_PYKC01000062.1	Protein Homology	CDS	83388	83984	.	-	0	ID=cds-WP_000818607.1;Parent=gene-C9F00_RS11000;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9F00_RS11000;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	84092	84550	.	-	.	ID=gene-C9F00_RS11005;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9F00_RS11005;old_locus_tag=C9F00_11265
NZ_PYKC01000062.1	Protein Homology	CDS	84092	84550	.	-	0	ID=cds-WP_000976078.1;Parent=gene-C9F00_RS11005;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9F00_RS11005;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	84528	85748	.	-	.	ID=gene-C9F00_RS11010;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9F00_RS11010;old_locus_tag=C9F00_11270
NZ_PYKC01000062.1	Protein Homology	CDS	84528	85748	.	-	0	ID=cds-WP_000050176.1;Parent=gene-C9F00_RS11010;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9F00_RS11010;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	85924	86589	.	+	.	ID=gene-C9F00_RS11015;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9F00_RS11015;old_locus_tag=C9F00_11275
NZ_PYKC01000062.1	Protein Homology	CDS	85924	86589	.	+	0	ID=cds-WP_000380129.1;Parent=gene-C9F00_RS11015;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9F00_RS11015;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	86807	87043	.	+	.	ID=gene-C9F00_RS11020;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9F00_RS11020;old_locus_tag=C9F00_11280
NZ_PYKC01000062.1	Protein Homology	CDS	86807	87043	.	+	0	ID=cds-WP_001519051.1;Parent=gene-C9F00_RS11020;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9F00_RS11020;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	87064	87231	.	+	.	ID=gene-C9F00_RS11025;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9F00_RS11025;old_locus_tag=C9F00_11285
NZ_PYKC01000062.1	Protein Homology	CDS	87064	87231	.	+	0	ID=cds-WP_001051798.1;Parent=gene-C9F00_RS11025;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9F00_RS11025;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	87329	88138	.	+	.	ID=gene-C9F00_RS11030;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9F00_RS11030;old_locus_tag=C9F00_11290
NZ_PYKC01000062.1	Protein Homology	CDS	87329	88138	.	+	0	ID=cds-WP_001114508.1;Parent=gene-C9F00_RS11030;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9F00_RS11030;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	88165	88644	.	-	.	ID=gene-C9F00_RS11035;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9F00_RS11035;old_locus_tag=C9F00_11295
NZ_PYKC01000062.1	Protein Homology	CDS	88165	88644	.	-	0	ID=cds-WP_001171887.1;Parent=gene-C9F00_RS11035;Dbxref=GenBank:WP_001171887.1;Name=WP_001171887.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9F00_RS11035;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171887.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	88653	89930	.	-	.	ID=gene-C9F00_RS11040;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=C9F00_RS11040;old_locus_tag=C9F00_11300
NZ_PYKC01000062.1	Protein Homology	CDS	88653	89930	.	-	0	ID=cds-WP_001661391.1;Parent=gene-C9F00_RS11040;Dbxref=GenBank:WP_001661391.1;Name=WP_001661391.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9F00_RS11040;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_001661391.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	90339	91409	.	+	.	ID=gene-C9F00_RS11045;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9F00_RS11045;old_locus_tag=C9F00_11305
NZ_PYKC01000062.1	Protein Homology	CDS	90339	91409	.	+	0	ID=cds-WP_001526672.1;Parent=gene-C9F00_RS11045;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9F00_RS11045;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	91406	92530	.	+	.	ID=gene-C9F00_RS11050;Name=C9F00_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11050;old_locus_tag=C9F00_11310
NZ_PYKC01000062.1	Protein Homology	CDS	91406	92530	.	+	0	ID=cds-WP_135369635.1;Parent=gene-C9F00_RS11050;Dbxref=GenBank:WP_135369635.1;Name=WP_135369635.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9F00_RS11050;product=glycosyltransferase family 4 protein;protein_id=WP_135369635.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	92523	93320	.	+	.	ID=gene-C9F00_RS11055;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9F00_RS11055;old_locus_tag=C9F00_11315
NZ_PYKC01000062.1	Protein Homology	CDS	92523	93320	.	+	0	ID=cds-WP_000229830.1;Parent=gene-C9F00_RS11055;Dbxref=GenBank:WP_000229830.1;Name=WP_000229830.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9F00_RS11055;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229830.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	93376	93537	.	+	.	ID=gene-C9F00_RS11060;Name=C9F00_RS11060;end_range=93537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11060;old_locus_tag=C9F00_11320;partial=true;pseudo=true
NZ_PYKC01000062.1	Protein Homology	CDS	93376	93537	.	+	0	ID=cds-C9F00_RS11060;Parent=gene-C9F00_RS11060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=93537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=C9F00_RS11060;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	93655	94734	.	+	.	ID=gene-C9F00_RS11070;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9F00_RS11070;old_locus_tag=C9F00_11330
NZ_PYKC01000062.1	Protein Homology	CDS	93655	94734	.	+	0	ID=cds-WP_135369083.1;Parent=gene-C9F00_RS11070;Dbxref=GenBank:WP_135369083.1;Name=WP_135369083.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9F00_RS11070;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_135369083.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	94740	95753	.	+	.	ID=gene-C9F00_RS11075;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9F00_RS11075;old_locus_tag=C9F00_11335
NZ_PYKC01000062.1	Protein Homology	CDS	94740	95753	.	+	0	ID=cds-WP_000088482.1;Parent=gene-C9F00_RS11075;Dbxref=GenBank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9F00_RS11075;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	95771	96784	.	+	.	ID=gene-C9F00_RS11080;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS11080;old_locus_tag=C9F00_11340
NZ_PYKC01000062.1	Protein Homology	CDS	95771	96784	.	+	0	ID=cds-WP_135420017.1;Parent=gene-C9F00_RS11080;Dbxref=GenBank:WP_135420017.1;Name=WP_135420017.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9F00_RS11080;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_135420017.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	96807	97505	.	+	.	ID=gene-C9F00_RS11085;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9F00_RS11085;old_locus_tag=C9F00_11345
NZ_PYKC01000062.1	Protein Homology	CDS	96807	97505	.	+	0	ID=cds-WP_000582811.1;Parent=gene-C9F00_RS11085;Dbxref=GenBank:WP_000582811.1;Name=WP_000582811.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9F00_RS11085;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582811.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	97655	98464	.	+	.	ID=gene-C9F00_RS11090;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9F00_RS11090;old_locus_tag=C9F00_11350
NZ_PYKC01000062.1	Protein Homology	CDS	97655	98464	.	+	0	ID=cds-WP_080222516.1;Parent=gene-C9F00_RS11090;Dbxref=GenBank:WP_080222516.1;Name=WP_080222516.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9F00_RS11090;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_080222516.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	98564	99709	.	+	.	ID=gene-C9F00_RS11095;Name=C9F00_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11095;old_locus_tag=C9F00_11355
NZ_PYKC01000062.1	Protein Homology	CDS	98564	99709	.	+	0	ID=cds-WP_000591817.1;Parent=gene-C9F00_RS11095;Dbxref=GenBank:WP_000591817.1;Name=WP_000591817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9F00_RS11095;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591817.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	99767	100981	.	-	.	ID=gene-C9F00_RS11100;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9F00_RS11100;old_locus_tag=C9F00_11360
NZ_PYKC01000062.1	Protein Homology	CDS	99767	100981	.	-	0	ID=cds-WP_039590890.1;Parent=gene-C9F00_RS11100;Dbxref=GenBank:WP_039590890.1;Name=WP_039590890.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9F00_RS11100;product=O-antigen ligase RfaL;protein_id=WP_039590890.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	101021	101974	.	-	.	ID=gene-C9F00_RS11105;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9F00_RS11105;old_locus_tag=C9F00_11365
NZ_PYKC01000062.1	Protein Homology	CDS	101021	101974	.	-	0	ID=cds-WP_001264614.1;Parent=gene-C9F00_RS11105;Dbxref=GenBank:WP_001264614.1;Name=WP_001264614.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9F00_RS11105;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264614.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	101974	103020	.	-	.	ID=gene-C9F00_RS11110;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=C9F00_RS11110;old_locus_tag=C9F00_11370
NZ_PYKC01000062.1	Protein Homology	CDS	101974	103020	.	-	0	ID=cds-WP_000699197.1;Parent=gene-C9F00_RS11110;Dbxref=GenBank:WP_000699197.1;Name=WP_000699197.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9F00_RS11110;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699197.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	103023	103955	.	-	.	ID=gene-C9F00_RS11115;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9F00_RS11115;old_locus_tag=C9F00_11375
NZ_PYKC01000062.1	Protein Homology	CDS	103023	103955	.	-	0	ID=cds-WP_000587771.1;Parent=gene-C9F00_RS11115;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9F00_RS11115;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	104158	105354	.	+	.	ID=gene-C9F00_RS11120;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9F00_RS11120;old_locus_tag=C9F00_11380
NZ_PYKC01000062.1	Protein Homology	CDS	104158	105354	.	+	0	ID=cds-WP_001213790.1;Parent=gene-C9F00_RS11120;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9F00_RS11120;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	105364	106389	.	+	.	ID=gene-C9F00_RS11125;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9F00_RS11125;old_locus_tag=C9F00_11385
NZ_PYKC01000062.1	Protein Homology	CDS	105364	106389	.	+	0	ID=cds-WP_000645990.1;Parent=gene-C9F00_RS11125;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9F00_RS11125;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	106683	107717	.	+	.	ID=gene-C9F00_RS11130;Name=C9F00_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11130;old_locus_tag=C9F00_11390
NZ_PYKC01000062.1	Protein Homology	CDS	106683	107717	.	+	0	ID=cds-WP_135369214.1;Parent=gene-C9F00_RS11130;Dbxref=GenBank:WP_135369214.1;Name=WP_135369214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9F00_RS11130;product=glycosyltransferase;protein_id=WP_135369214.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	107704	108666	.	-	.	ID=gene-C9F00_RS11135;Name=C9F00_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11135;old_locus_tag=C9F00_11395
NZ_PYKC01000062.1	Protein Homology	CDS	107704	108666	.	-	0	ID=cds-WP_135369215.1;Parent=gene-C9F00_RS11135;Dbxref=GenBank:WP_135369215.1;Name=WP_135369215.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9F00_RS11135;product=divergent polysaccharide deacetylase family protein;protein_id=WP_135369215.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	108670	109929	.	-	.	ID=gene-C9F00_RS11140;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9F00_RS11140;old_locus_tag=C9F00_11400
NZ_PYKC01000062.1	Protein Homology	CDS	108670	109929	.	-	0	ID=cds-WP_058814511.1;Parent=gene-C9F00_RS11140;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9F00_RS11140;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	109963	111507	.	-	.	ID=gene-C9F00_RS11145;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9F00_RS11145;old_locus_tag=C9F00_11405
NZ_PYKC01000062.1	Protein Homology	CDS	109963	111507	.	-	0	ID=cds-WP_000116576.1;Parent=gene-C9F00_RS11145;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F00_RS11145;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	111755	112186	.	+	.	ID=gene-C9F00_RS11150;Name=C9F00_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11150;old_locus_tag=C9F00_11410
NZ_PYKC01000062.1	Protein Homology	CDS	111755	112186	.	+	0	ID=cds-WP_001156179.1;Parent=gene-C9F00_RS11150;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9F00_RS11150;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	112272	112523	.	+	.	ID=gene-C9F00_RS11155;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9F00_RS11155;old_locus_tag=C9F00_11415
NZ_PYKC01000062.1	Protein Homology	CDS	112272	112523	.	+	0	ID=cds-WP_001273795.1;Parent=gene-C9F00_RS11155;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9F00_RS11155;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	112567	113034	.	+	.	ID=gene-C9F00_RS11160;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9F00_RS11160;old_locus_tag=C9F00_11420
NZ_PYKC01000062.1	Protein Homology	CDS	112567	113034	.	+	0	ID=cds-WP_000003370.1;Parent=gene-C9F00_RS11160;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9F00_RS11160;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	113034	114053	.	+	.	ID=gene-C9F00_RS11165;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9F00_RS11165;old_locus_tag=C9F00_11425
NZ_PYKC01000062.1	Protein Homology	CDS	113034	114053	.	+	0	ID=cds-WP_001076596.1;Parent=gene-C9F00_RS11165;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9F00_RS11165;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	114131	114952	.	+	.	ID=gene-C9F00_RS11170;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9F00_RS11170;old_locus_tag=C9F00_11430
NZ_PYKC01000062.1	Protein Homology	CDS	114131	114952	.	+	0	ID=cds-WP_031605978.1;Parent=gene-C9F00_RS11170;Dbxref=GenBank:WP_031605978.1;Name=WP_031605978.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9F00_RS11170;product=serine O-acetyltransferase;protein_id=WP_031605978.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	115035	116345	.	-	.	ID=gene-C9F00_RS11175;Name=C9F00_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11175;old_locus_tag=C9F00_11435
NZ_PYKC01000062.1	Protein Homology	CDS	115035	116345	.	-	0	ID=cds-WP_135492288.1;Parent=gene-C9F00_RS11175;Dbxref=GenBank:WP_135492288.1;Name=WP_135492288.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9F00_RS11175;product=MFS transporter;protein_id=WP_135492288.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	116419	117615	.	-	.	ID=gene-C9F00_RS11180;Name=C9F00_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11180;old_locus_tag=C9F00_11440
NZ_PYKC01000062.1	Protein Homology	CDS	116419	117615	.	-	0	ID=cds-WP_001218249.1;Parent=gene-C9F00_RS11180;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9F00_RS11180;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	117934	118938	.	+	.	ID=gene-C9F00_RS11185;Name=C9F00_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11185;old_locus_tag=C9F00_11450
NZ_PYKC01000062.1	Protein Homology	CDS	117934	118938	.	+	0	ID=cds-WP_001537635.1;Parent=gene-C9F00_RS11185;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9F00_RS11185;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	119006	119479	.	-	.	ID=gene-C9F00_RS11190;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9F00_RS11190;old_locus_tag=C9F00_11455
NZ_PYKC01000062.1	Protein Homology	CDS	119006	119479	.	-	0	ID=cds-WP_000932335.1;Parent=gene-C9F00_RS11190;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9F00_RS11190;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	119544	120734	.	-	.	ID=gene-C9F00_RS11195;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9F00_RS11195;old_locus_tag=C9F00_11460
NZ_PYKC01000062.1	Protein Homology	CDS	119544	120734	.	-	0	ID=cds-WP_000586997.1;Parent=gene-C9F00_RS11195;Dbxref=GenBank:WP_000586997.1;Name=WP_000586997.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F00_RS11195;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000586997.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	120731	121507	.	-	.	ID=gene-C9F00_RS11200;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=C9F00_RS11200;old_locus_tag=C9F00_11465
NZ_PYKC01000062.1	Protein Homology	CDS	120731	121507	.	-	0	ID=cds-WP_000636696.1;Parent=gene-C9F00_RS11200;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9F00_RS11200;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	121504	123159	.	-	.	ID=gene-C9F00_RS11205;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9F00_RS11205;old_locus_tag=C9F00_11470
NZ_PYKC01000062.1	Protein Homology	CDS	121504	123159	.	-	0	ID=cds-WP_135369216.1;Parent=gene-C9F00_RS11205;Dbxref=GenBank:WP_135369216.1;Name=WP_135369216.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9F00_RS11205;product=L-lactate permease;protein_id=WP_135369216.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	123458	127570	.	-	.	ID=gene-C9F00_RS11210;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9F00_RS11210;old_locus_tag=C9F00_11475
NZ_PYKC01000062.1	Protein Homology	CDS	123458	127570	.	-	0	ID=cds-WP_135492290.1;Parent=gene-C9F00_RS11210;Dbxref=GenBank:WP_135492290.1;Name=WP_135492290.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F00_RS11210;product=trimeric autotransporter adhesin SadA;protein_id=WP_135492290.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	127614	128297	.	-	.	ID=gene-C9F00_RS11215;Name=C9F00_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11215;old_locus_tag=C9F00_11480
NZ_PYKC01000062.1	Protein Homology	CDS	127614	128297	.	-	0	ID=cds-WP_135369059.1;Parent=gene-C9F00_RS11215;Dbxref=GenBank:WP_135369059.1;Name=WP_135369059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9F00_RS11215;product=DUF3251 domain-containing protein;protein_id=WP_135369059.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	128785	129147	.	-	.	ID=gene-C9F00_RS11220;Name=C9F00_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11220;old_locus_tag=C9F00_11490
NZ_PYKC01000062.1	Protein Homology	CDS	128785	129147	.	-	0	ID=cds-WP_000665687.1;Parent=gene-C9F00_RS11220;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9F00_RS11220;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	129438	129647	.	+	.	ID=gene-C9F00_RS11225;Name=C9F00_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11225;old_locus_tag=C9F00_11495
NZ_PYKC01000062.1	Protein Homology	CDS	129438	129647	.	+	0	ID=cds-WP_001062558.1;Parent=gene-C9F00_RS11225;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9F00_RS11225;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	129657	130247	.	-	.	ID=gene-C9F00_RS11230;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9F00_RS11230;old_locus_tag=C9F00_11500
NZ_PYKC01000062.1	Protein Homology	CDS	129657	130247	.	-	0	ID=cds-WP_000193201.1;Parent=gene-C9F00_RS11230;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9F00_RS11230;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	130244	131392	.	-	.	ID=gene-C9F00_RS11235;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9F00_RS11235;old_locus_tag=C9F00_11505
NZ_PYKC01000062.1	Protein Homology	CDS	130244	131392	.	-	0	ID=cds-WP_023250378.1;Parent=gene-C9F00_RS11235;Dbxref=GenBank:WP_023250378.1;Name=WP_023250378.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9F00_RS11235;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_023250378.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	131613	133529	.	-	.	ID=gene-C9F00_RS11240;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9F00_RS11240;old_locus_tag=C9F00_11510
NZ_PYKC01000062.1	Protein Homology	CDS	131613	133529	.	-	0	ID=cds-WP_000093287.1;Parent=gene-C9F00_RS11240;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9F00_RS11240;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	gene	134005	134613	.	+	.	ID=gene-C9F00_RS11245;Name=C9F00_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11245;old_locus_tag=C9F00_11515
NZ_PYKC01000062.1	Protein Homology	CDS	134005	134613	.	+	0	ID=cds-WP_000766688.1;Parent=gene-C9F00_RS11245;Dbxref=GenBank:WP_000766688.1;Name=WP_000766688.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9F00_RS11245;product=glutathione S-transferase;protein_id=WP_000766688.1;transl_table=11
NZ_PYKC01000062.1	RefSeq	pseudogene	134712	135188	.	+	.	ID=gene-C9F00_RS11250;Name=C9F00_RS11250;end_range=135188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11250;old_locus_tag=C9F00_11520;partial=true;pseudo=true
NZ_PYKC01000062.1	Protein Homology	CDS	134712	135188	.	+	0	ID=cds-C9F00_RS11250;Parent=gene-C9F00_RS11250;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=135188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9F00_RS11250;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000141.1 1 49629
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000141.1	RefSeq	region	1	49629	.	+	.	ID=NZ_PYKC01000141.1:1..49629;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000141.1	RefSeq	gene	141	1121	.	-	.	ID=gene-C9F00_RS21530;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9F00_RS21530;old_locus_tag=C9F00_22045
NZ_PYKC01000141.1	Protein Homology	CDS	141	1121	.	-	0	ID=cds-WP_135492506.1;Parent=gene-C9F00_RS21530;Dbxref=GenBank:WP_135492506.1;Name=WP_135492506.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9F00_RS21530;product=tRNA-modifying protein YgfZ;protein_id=WP_135492506.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	1371	1637	.	+	.	ID=gene-C9F00_RS21540;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9F00_RS21540;old_locus_tag=C9F00_22055
NZ_PYKC01000141.1	Protein Homology	CDS	1371	1637	.	+	0	ID=cds-WP_000351186.1;Parent=gene-C9F00_RS21540;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9F00_RS21540;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	1618	2031	.	+	.	ID=gene-C9F00_RS21545;Name=C9F00_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21545;old_locus_tag=C9F00_22060
NZ_PYKC01000141.1	Protein Homology	CDS	1618	2031	.	+	0	ID=cds-WP_000244756.1;Parent=gene-C9F00_RS21545;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9F00_RS21545;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	2084	2605	.	-	.	ID=gene-C9F00_RS21550;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9F00_RS21550;old_locus_tag=C9F00_22065
NZ_PYKC01000141.1	Protein Homology	CDS	2084	2605	.	-	0	ID=cds-WP_001055885.1;Parent=gene-C9F00_RS21550;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9F00_RS21550;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	2718	3614	.	+	.	ID=gene-C9F00_RS21555;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9F00_RS21555;old_locus_tag=C9F00_22070
NZ_PYKC01000141.1	Protein Homology	CDS	2718	3614	.	+	0	ID=cds-WP_000434302.1;Parent=gene-C9F00_RS21555;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9F00_RS21555;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	3638	4351	.	+	.	ID=gene-C9F00_RS21560;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9F00_RS21560;old_locus_tag=C9F00_22075
NZ_PYKC01000141.1	Protein Homology	CDS	3638	4351	.	+	0	ID=cds-WP_000745614.1;Parent=gene-C9F00_RS21560;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9F00_RS21560;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	4357	6090	.	+	.	ID=gene-C9F00_RS21565;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9F00_RS21565;old_locus_tag=C9F00_22080
NZ_PYKC01000141.1	Protein Homology	CDS	4357	6090	.	+	0	ID=cds-WP_000813392.1;Parent=gene-C9F00_RS21565;Dbxref=GenBank:WP_000813392.1;Name=WP_000813392.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9F00_RS21565;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813392.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	6195	7293	.	+	.	ID=gene-C9F00_RS21570;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9F00_RS21570;old_locus_tag=C9F00_22085
NZ_PYKC01000141.1	Protein Homology	CDS	6195	6269	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9F00_RS21570;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9F00_RS21570;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKC01000141.1	Protein Homology	CDS	6271	7293	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9F00_RS21570;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9F00_RS21570;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	7303	8820	.	+	.	ID=gene-C9F00_RS21575;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9F00_RS21575;old_locus_tag=C9F00_22090
NZ_PYKC01000141.1	Protein Homology	CDS	7303	8820	.	+	0	ID=cds-WP_000003339.1;Parent=gene-C9F00_RS21575;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9F00_RS21575;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	8896	9441	.	-	.	ID=gene-C9F00_RS21580;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9F00_RS21580;old_locus_tag=C9F00_22095
NZ_PYKC01000141.1	Protein Homology	CDS	8896	9441	.	-	0	ID=cds-WP_000134000.1;Parent=gene-C9F00_RS21580;Dbxref=GenBank:WP_000134000.1;Name=WP_000134000.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9F00_RS21580;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000134000.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	9706	10464	.	+	.	ID=gene-C9F00_RS21585;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=C9F00_RS21585;old_locus_tag=C9F00_22105
NZ_PYKC01000141.1	Protein Homology	CDS	9706	10464	.	+	0	ID=cds-WP_000244328.1;Parent=gene-C9F00_RS21585;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9F00_RS21585;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	10544	10617	.	+	.	ID=gene-C9F00_RS21590;Name=C9F00_RS21590;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS21590;old_locus_tag=C9F00_22110
NZ_PYKC01000141.1	tRNAscan-SE	tRNA	10544	10617	.	+	.	ID=rna-C9F00_RS21590;Parent=gene-C9F00_RS21590;anticodon=(pos:10576..10578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21590;product=tRNA-Gly
NZ_PYKC01000141.1	tRNAscan-SE	exon	10544	10617	.	+	.	ID=exon-C9F00_RS21590-1;Parent=rna-C9F00_RS21590;anticodon=(pos:10576..10578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21590;product=tRNA-Gly
NZ_PYKC01000141.1	RefSeq	gene	10710	10922	.	-	.	ID=gene-C9F00_RS21595;Name=C9F00_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21595;old_locus_tag=C9F00_22115
NZ_PYKC01000141.1	Protein Homology	CDS	10710	10922	.	-	0	ID=cds-WP_063808845.1;Parent=gene-C9F00_RS21595;Dbxref=GenBank:WP_063808845.1;Name=WP_063808845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=C9F00_RS21595;product=hypothetical protein;protein_id=WP_063808845.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	11131	11358	.	+	.	ID=gene-C9F00_RS21600;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=C9F00_RS21600;old_locus_tag=C9F00_22120
NZ_PYKC01000141.1	Protein Homology	CDS	11131	11358	.	+	0	ID=cds-WP_000557545.1;Parent=gene-C9F00_RS21600;Dbxref=GenBank:WP_000557545.1;Name=WP_000557545.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461951.1;locus_tag=C9F00_RS21600;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557545.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	11358	11756	.	+	.	ID=gene-C9F00_RS21605;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=C9F00_RS21605;old_locus_tag=C9F00_22125
NZ_PYKC01000141.1	Protein Homology	CDS	11358	11756	.	+	0	ID=cds-WP_000911337.1;Parent=gene-C9F00_RS21605;Dbxref=GenBank:WP_000911337.1;Name=WP_000911337.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=C9F00_RS21605;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911337.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	12560	13096	.	+	.	ID=gene-C9F00_RS21615;Name=C9F00_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21615;old_locus_tag=C9F00_22135
NZ_PYKC01000141.1	Protein Homology	CDS	12560	13096	.	+	0	ID=cds-WP_001038500.1;Parent=gene-C9F00_RS21615;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9F00_RS21615;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	13143	13775	.	+	.	ID=gene-C9F00_RS21620;Name=C9F00_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21620;old_locus_tag=C9F00_22140
NZ_PYKC01000141.1	Protein Homology	CDS	13143	13775	.	+	0	ID=cds-WP_000835259.1;Parent=gene-C9F00_RS21620;Dbxref=GenBank:WP_000835259.1;Name=WP_000835259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9F00_RS21620;product=YfdX family protein;protein_id=WP_000835259.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	14494	15081	.	+	.	ID=gene-C9F00_RS21625;Name=C9F00_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21625;old_locus_tag=C9F00_22145
NZ_PYKC01000141.1	Protein Homology	CDS	14494	15081	.	+	0	ID=cds-WP_001244645.1;Parent=gene-C9F00_RS21625;Dbxref=GenBank:WP_001244645.1;Name=WP_001244645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244645.1;locus_tag=C9F00_RS21625;product=fimbrial protein;protein_id=WP_001244645.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	15201	17690	.	+	.	ID=gene-C9F00_RS21630;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9F00_RS21630;old_locus_tag=C9F00_22150
NZ_PYKC01000141.1	Protein Homology	CDS	15201	17690	.	+	0	ID=cds-WP_135492508.1;Parent=gene-C9F00_RS21630;Dbxref=GenBank:WP_135492508.1;Name=WP_135492508.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9F00_RS21630;product=fimbrial outer membrane usher protein StdB;protein_id=WP_135492508.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	17731	18474	.	+	.	ID=gene-C9F00_RS21635;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9F00_RS21635;old_locus_tag=C9F00_22155
NZ_PYKC01000141.1	Protein Homology	CDS	17731	18474	.	+	0	ID=cds-WP_000798502.1;Parent=gene-C9F00_RS21635;Dbxref=GenBank:WP_000798502.1;Name=WP_000798502.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9F00_RS21635;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798502.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	18471	19547	.	+	.	ID=gene-C9F00_RS21640;Name=C9F00_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21640;old_locus_tag=C9F00_22160
NZ_PYKC01000141.1	Protein Homology	CDS	18471	19547	.	+	0	ID=cds-WP_135369141.1;Parent=gene-C9F00_RS21640;Dbxref=GenBank:WP_135369141.1;Name=WP_135369141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9F00_RS21640;product=hypothetical protein;protein_id=WP_135369141.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	19691	20203	.	+	.	ID=gene-C9F00_RS21645;Name=C9F00_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21645;old_locus_tag=C9F00_22165
NZ_PYKC01000141.1	Protein Homology	CDS	19691	20203	.	+	0	ID=cds-WP_000336257.1;Parent=gene-C9F00_RS21645;Dbxref=GenBank:WP_000336257.1;Name=WP_000336257.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=C9F00_RS21645;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000336257.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	20190	20948	.	+	.	ID=gene-C9F00_RS21650;Name=C9F00_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21650;old_locus_tag=C9F00_22170
NZ_PYKC01000141.1	Protein Homology	CDS	20190	20948	.	+	0	ID=cds-WP_000134800.1;Parent=gene-C9F00_RS21650;Dbxref=GenBank:WP_000134800.1;Name=WP_000134800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9F00_RS21650;product=transcriptional regulator;protein_id=WP_000134800.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	21158	21982	.	-	.	ID=gene-C9F00_RS21655;Name=C9F00_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21655;old_locus_tag=C9F00_22175
NZ_PYKC01000141.1	Protein Homology	CDS	21158	21982	.	-	0	ID=cds-WP_135492510.1;Parent=gene-C9F00_RS21655;Dbxref=GenBank:WP_135492510.1;Name=WP_135492510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F00_RS21655;product=nickel/cobalt efflux protein RcnA;protein_id=WP_135492510.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	22105	22377	.	+	.	ID=gene-C9F00_RS21660;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9F00_RS21660;old_locus_tag=C9F00_22180
NZ_PYKC01000141.1	Protein Homology	CDS	22105	22377	.	+	0	ID=cds-WP_000019953.1;Parent=gene-C9F00_RS21660;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9F00_RS21660;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	22408	23637	.	-	.	ID=gene-C9F00_RS21665;Name=C9F00_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21665;old_locus_tag=C9F00_22185
NZ_PYKC01000141.1	Protein Homology	CDS	22408	23637	.	-	0	ID=cds-WP_000036837.1;Parent=gene-C9F00_RS21665;Dbxref=GenBank:WP_000036837.1;Name=WP_000036837.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9F00_RS21665;product=amino acid permease;protein_id=WP_000036837.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	23779	24234	.	-	.	ID=gene-C9F00_RS21670;Name=C9F00_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21670;old_locus_tag=C9F00_22190
NZ_PYKC01000141.1	Protein Homology	CDS	23779	24234	.	-	0	ID=cds-WP_001519547.1;Parent=gene-C9F00_RS21670;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9F00_RS21670;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	24338	25201	.	+	.	ID=gene-C9F00_RS21675;Name=C9F00_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21675;old_locus_tag=C9F00_22195
NZ_PYKC01000141.1	Protein Homology	CDS	24338	25201	.	+	0	ID=cds-WP_001270774.1;Parent=gene-C9F00_RS21675;Dbxref=GenBank:WP_001270774.1;Name=WP_001270774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9F00_RS21675;product=LysR family transcriptional regulator;protein_id=WP_001270774.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	25324	26502	.	+	.	ID=gene-C9F00_RS21680;Name=C9F00_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21680;old_locus_tag=C9F00_22200
NZ_PYKC01000141.1	Protein Homology	CDS	25324	26502	.	+	0	ID=cds-WP_000665980.1;Parent=gene-C9F00_RS21680;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9F00_RS21680;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	26933	27769	.	+	.	ID=gene-C9F00_RS21690;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=C9F00_RS21690;old_locus_tag=C9F00_22215
NZ_PYKC01000141.1	Protein Homology	CDS	26933	27769	.	+	0	ID=cds-WP_000383270.1;Parent=gene-C9F00_RS21690;Dbxref=GenBank:WP_000383270.1;Name=WP_000383270.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9F00_RS21690;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383270.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	27826	28587	.	+	.	ID=gene-C9F00_RS21695;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9F00_RS21695;old_locus_tag=C9F00_22220
NZ_PYKC01000141.1	Protein Homology	CDS	27826	28587	.	+	0	ID=cds-WP_000602478.1;Parent=gene-C9F00_RS21695;Dbxref=GenBank:WP_000602478.1;Name=WP_000602478.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9F00_RS21695;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602478.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	28941	30359	.	+	.	ID=gene-C9F00_RS21700;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9F00_RS21700;old_locus_tag=C9F00_22225
NZ_PYKC01000141.1	Protein Homology	CDS	28941	30359	.	+	0	ID=cds-WP_000253650.1;Parent=gene-C9F00_RS21700;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9F00_RS21700;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	30472	31179	.	+	.	ID=gene-C9F00_RS21705;Name=C9F00_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21705;old_locus_tag=C9F00_22230
NZ_PYKC01000141.1	Protein Homology	CDS	30472	31179	.	+	0	ID=cds-WP_000848633.1;Parent=gene-C9F00_RS21705;Dbxref=GenBank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9F00_RS21705;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	31151	32086	.	-	.	ID=gene-C9F00_RS21710;Name=C9F00_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21710;old_locus_tag=C9F00_22235
NZ_PYKC01000141.1	Protein Homology	CDS	31151	32086	.	-	0	ID=cds-WP_000741798.1;Parent=gene-C9F00_RS21710;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9F00_RS21710;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	32204	33466	.	+	.	ID=gene-C9F00_RS21715;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9F00_RS21715;old_locus_tag=C9F00_22240
NZ_PYKC01000141.1	Protein Homology	CDS	32204	33466	.	+	0	ID=cds-WP_135369235.1;Parent=gene-C9F00_RS21715;Dbxref=GenBank:WP_135369235.1;Name=WP_135369235.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9F00_RS21715;product=diaminopimelate decarboxylase;protein_id=WP_135369235.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	33476	34498	.	-	.	ID=gene-C9F00_RS21720;Name=C9F00_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21720;old_locus_tag=C9F00_22245
NZ_PYKC01000141.1	Protein Homology	CDS	33476	34498	.	-	0	ID=cds-WP_000968338.1;Parent=gene-C9F00_RS21720;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9F00_RS21720;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	34509	35537	.	-	.	ID=gene-C9F00_RS21725;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9F00_RS21725;old_locus_tag=C9F00_22250
NZ_PYKC01000141.1	Protein Homology	CDS	34509	35537	.	-	0	ID=cds-WP_000201030.1;Parent=gene-C9F00_RS21725;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9F00_RS21725;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	36130	38289	.	+	.	ID=gene-C9F00_RS21735;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=C9F00_RS21735;old_locus_tag=C9F00_22255
NZ_PYKC01000141.1	Protein Homology	CDS	36130	38289	.	+	0	ID=cds-WP_000896101.1;Parent=gene-C9F00_RS21735;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9F00_RS21735;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	38282	39484	.	+	.	ID=gene-C9F00_RS21740;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9F00_RS21740;old_locus_tag=C9F00_22260
NZ_PYKC01000141.1	Protein Homology	CDS	38282	39484	.	+	0	ID=cds-WP_135369236.1;Parent=gene-C9F00_RS21740;Dbxref=GenBank:WP_135369236.1;Name=WP_135369236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9F00_RS21740;product=lysophospholipid transporter LplT;protein_id=WP_135369236.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	39571	40611	.	-	.	ID=gene-C9F00_RS21745;Name=C9F00_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21745;old_locus_tag=C9F00_22265
NZ_PYKC01000141.1	Protein Homology	CDS	39571	40611	.	-	0	ID=cds-WP_079802339.1;Parent=gene-C9F00_RS21745;Dbxref=GenBank:WP_079802339.1;Name=WP_079802339.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9F00_RS21745;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_079802339.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	40802	41020	.	-	.	ID=gene-C9F00_RS21750;Name=C9F00_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21750;old_locus_tag=C9F00_22270
NZ_PYKC01000141.1	Protein Homology	CDS	40802	41020	.	-	0	ID=cds-WP_000758662.1;Parent=gene-C9F00_RS21750;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9F00_RS21750;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	41190	41903	.	-	.	ID=gene-C9F00_RS21755;Name=C9F00_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21755;old_locus_tag=C9F00_22275
NZ_PYKC01000141.1	Protein Homology	CDS	41190	41903	.	-	0	ID=cds-WP_000895635.1;Parent=gene-C9F00_RS21755;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9F00_RS21755;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	42085	42780	.	-	.	ID=gene-C9F00_RS21760;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=C9F00_RS21760;old_locus_tag=C9F00_22280
NZ_PYKC01000141.1	Protein Homology	CDS	42085	42780	.	-	0	ID=cds-WP_001274930.1;Parent=gene-C9F00_RS21760;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9F00_RS21760;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	43463	43993	.	+	.	ID=gene-C9F00_RS21765;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9F00_RS21765;old_locus_tag=C9F00_22285
NZ_PYKC01000141.1	Protein Homology	CDS	43463	43993	.	+	0	ID=cds-WP_000564481.1;Parent=gene-C9F00_RS21765;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9F00_RS21765;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	44006	46252	.	+	.	ID=gene-C9F00_RS21770;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F00_RS21770;old_locus_tag=C9F00_22290
NZ_PYKC01000141.1	Protein Homology	CDS	44006	46252	.	+	0	ID=cds-WP_000957888.1;Parent=gene-C9F00_RS21770;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9F00_RS21770;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	46468	47343	.	+	.	ID=gene-C9F00_RS21775;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9F00_RS21775;old_locus_tag=C9F00_22295
NZ_PYKC01000141.1	Protein Homology	CDS	46468	47343	.	+	0	ID=cds-WP_000204645.1;Parent=gene-C9F00_RS21775;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9F00_RS21775;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	47350	48144	.	+	.	ID=gene-C9F00_RS21780;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=C9F00_RS21780;old_locus_tag=C9F00_22300
NZ_PYKC01000141.1	Protein Homology	CDS	47350	48144	.	+	0	ID=cds-WP_000816247.1;Parent=gene-C9F00_RS21780;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F00_RS21780;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	48329	48799	.	+	.	ID=gene-C9F00_RS21790;Name=C9F00_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21790;old_locus_tag=C9F00_22310
NZ_PYKC01000141.1	Protein Homology	CDS	48329	48799	.	+	0	ID=cds-WP_135369237.1;Parent=gene-C9F00_RS21790;Dbxref=GenBank:WP_135369237.1;Name=WP_135369237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9F00_RS21790;product=prepilin peptidase-dependent protein;protein_id=WP_135369237.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	48790	49353	.	+	.	ID=gene-C9F00_RS21795;Name=C9F00_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21795;old_locus_tag=C9F00_22315
NZ_PYKC01000141.1	Protein Homology	CDS	48790	49353	.	+	0	ID=cds-WP_000029152.1;Parent=gene-C9F00_RS21795;Dbxref=GenBank:WP_000029152.1;Name=WP_000029152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9F00_RS21795;product=prepilin peptidase-dependent protein;protein_id=WP_000029152.1;transl_table=11
NZ_PYKC01000141.1	RefSeq	gene	49350	49629	.	+	.	ID=gene-C9F00_RS21800;Name=C9F00_RS21800;end_range=49629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21800;old_locus_tag=C9F00_22320;partial=true
NZ_PYKC01000141.1	Protein Homology	CDS	49350	49629	.	+	0	ID=cds-WP_135492512.1;Parent=gene-C9F00_RS21800;Dbxref=GenBank:WP_135492512.1;Name=WP_135492512.1;end_range=49629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9F00_RS21800;partial=true;product=DUF2509 family protein;protein_id=WP_135492512.1;transl_table=11
##sequence-region NZ_PYKC01000082.1 1 47398
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000082.1	RefSeq	region	1	47398	.	+	.	ID=NZ_PYKC01000082.1:1..47398;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000082.1	RefSeq	gene	1	289	.	-	.	ID=gene-C9F00_RS13665;Name=C9F00_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13665;old_locus_tag=C9F00_14000;partial=true;start_range=.,1
NZ_PYKC01000082.1	Protein Homology	CDS	1	289	.	-	0	ID=cds-WP_135492346.1;Parent=gene-C9F00_RS13665;Dbxref=GenBank:WP_135492346.1;Name=WP_135492346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F00_RS13665;partial=true;product=DUF882 domain-containing protein;protein_id=WP_135492346.1;start_range=.,1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	549	2396	.	-	.	ID=gene-C9F00_RS13670;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9F00_RS13670;old_locus_tag=C9F00_14010
NZ_PYKC01000082.1	Protein Homology	CDS	549	2396	.	-	0	ID=cds-WP_135369653.1;Parent=gene-C9F00_RS13670;Dbxref=GenBank:WP_135369653.1;Name=WP_135369653.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9F00_RS13670;product=L%2CD-transpeptidase;protein_id=WP_135369653.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	2741	7207	.	-	.	ID=gene-C9F00_RS13680;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=C9F00_RS13680;old_locus_tag=C9F00_14015
NZ_PYKC01000082.1	Protein Homology	CDS	2741	7207	.	-	0	ID=cds-WP_000572733.1;Parent=gene-C9F00_RS13680;Dbxref=GenBank:WP_000572733.1;Name=WP_000572733.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F00_RS13680;product=chromosome partition protein MukB;protein_id=WP_000572733.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	7207	7911	.	-	.	ID=gene-C9F00_RS13685;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9F00_RS13685;old_locus_tag=C9F00_14020
NZ_PYKC01000082.1	Protein Homology	CDS	7207	7911	.	-	0	ID=cds-WP_000060025.1;Parent=gene-C9F00_RS13685;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9F00_RS13685;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	7892	9214	.	-	.	ID=gene-C9F00_RS13690;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9F00_RS13690;old_locus_tag=C9F00_14025
NZ_PYKC01000082.1	Protein Homology	CDS	7892	9214	.	-	0	ID=cds-WP_001288828.1;Parent=gene-C9F00_RS13690;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F00_RS13690;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	9207	10010	.	-	.	ID=gene-C9F00_RS13695;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9F00_RS13695;old_locus_tag=C9F00_14030
NZ_PYKC01000082.1	Protein Homology	CDS	9207	10010	.	-	0	ID=cds-WP_001154025.1;Parent=gene-C9F00_RS13695;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9F00_RS13695;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	10146	10922	.	+	.	ID=gene-C9F00_RS13700;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9F00_RS13700;old_locus_tag=C9F00_14035
NZ_PYKC01000082.1	Protein Homology	CDS	10146	10922	.	+	0	ID=cds-WP_000899554.1;Parent=gene-C9F00_RS13700;Dbxref=GenBank:WP_000899554.1;Name=WP_000899554.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9F00_RS13700;product=envelope biogenesis factor ElyC;protein_id=WP_000899554.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	10902	11795	.	-	.	ID=gene-C9F00_RS13705;Name=C9F00_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13705;old_locus_tag=C9F00_14040
NZ_PYKC01000082.1	Protein Homology	CDS	10902	11795	.	-	0	ID=cds-WP_000436894.1;Parent=gene-C9F00_RS13705;Dbxref=GenBank:WP_000436894.1;Name=WP_000436894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9F00_RS13705;product=YcbJ family phosphotransferase;protein_id=WP_000436894.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	12006	12752	.	-	.	ID=gene-C9F00_RS13715;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9F00_RS13715;old_locus_tag=C9F00_14045
NZ_PYKC01000082.1	Protein Homology	CDS	12006	12752	.	-	0	ID=cds-WP_079841760.1;Parent=gene-C9F00_RS13715;Dbxref=GenBank:WP_079841760.1;Name=WP_079841760.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9F00_RS13715;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_079841760.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	12749	12931	.	-	.	ID=gene-C9F00_RS13720;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9F00_RS13720;old_locus_tag=C9F00_14050
NZ_PYKC01000082.1	Protein Homology	CDS	12749	12931	.	-	0	ID=cds-WP_000350061.1;Parent=gene-C9F00_RS13720;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9F00_RS13720;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	12983	14215	.	-	.	ID=gene-C9F00_RS13725;Name=C9F00_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13725;old_locus_tag=C9F00_14055
NZ_PYKC01000082.1	Protein Homology	CDS	12983	14215	.	-	0	ID=cds-WP_135369652.1;Parent=gene-C9F00_RS13725;Dbxref=GenBank:WP_135369652.1;Name=WP_135369652.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9F00_RS13725;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369652.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	14259	15236	.	-	.	ID=gene-C9F00_RS13730;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9F00_RS13730;old_locus_tag=C9F00_14060
NZ_PYKC01000082.1	Protein Homology	CDS	14259	15236	.	-	0	ID=cds-WP_023243866.1;Parent=gene-C9F00_RS13730;Dbxref=GenBank:WP_023243866.1;Name=WP_023243866.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9F00_RS13730;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_023243866.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	15233	16981	.	-	.	ID=gene-C9F00_RS13735;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9F00_RS13735;old_locus_tag=C9F00_14065
NZ_PYKC01000082.1	Protein Homology	CDS	15233	16981	.	-	0	ID=cds-WP_000551246.1;Parent=gene-C9F00_RS13735;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9F00_RS13735;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	17018	19282	.	-	.	ID=gene-C9F00_RS13740;Name=C9F00_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13740;old_locus_tag=C9F00_14070
NZ_PYKC01000082.1	Protein Homology	CDS	17018	19282	.	-	0	ID=cds-WP_135369651.1;Parent=gene-C9F00_RS13740;Dbxref=GenBank:WP_135369651.1;Name=WP_135369651.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9F00_RS13740;product=ComEC family protein;protein_id=WP_135369651.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	19512	19796	.	-	.	ID=gene-C9F00_RS13745;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9F00_RS13745;old_locus_tag=C9F00_14075
NZ_PYKC01000082.1	Protein Homology	CDS	19512	19796	.	-	0	ID=cds-WP_000167332.1;Parent=gene-C9F00_RS13745;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9F00_RS13745;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	19952	21625	.	-	.	ID=gene-C9F00_RS13750;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9F00_RS13750;old_locus_tag=C9F00_14080
NZ_PYKC01000082.1	Protein Homology	CDS	19952	21625	.	-	0	ID=cds-WP_000140324.1;Parent=gene-C9F00_RS13750;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9F00_RS13750;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	21739	22422	.	-	.	ID=gene-C9F00_RS13755;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9F00_RS13755;old_locus_tag=C9F00_14085
NZ_PYKC01000082.1	Protein Homology	CDS	21739	22422	.	-	0	ID=cds-WP_000125007.1;Parent=gene-C9F00_RS13755;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9F00_RS13755;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	22595	23356	.	-	.	ID=gene-C9F00_RS13760;Name=C9F00_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13760;old_locus_tag=C9F00_14090
NZ_PYKC01000082.1	Protein Homology	CDS	22595	23356	.	-	0	ID=cds-WP_135369650.1;Parent=gene-C9F00_RS13760;Dbxref=GenBank:WP_135369650.1;Name=WP_135369650.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9F00_RS13760;product=M48 family metallopeptidase;protein_id=WP_135369650.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	23499	24782	.	-	.	ID=gene-C9F00_RS13765;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9F00_RS13765;old_locus_tag=C9F00_14095
NZ_PYKC01000082.1	Protein Homology	CDS	23499	24782	.	-	0	ID=cds-WP_135369411.1;Parent=gene-C9F00_RS13765;Dbxref=GenBank:WP_135369411.1;Name=WP_135369411.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9F00_RS13765;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_135369411.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	24853	25941	.	-	.	ID=gene-C9F00_RS13770;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9F00_RS13770;old_locus_tag=C9F00_14100
NZ_PYKC01000082.1	Protein Homology	CDS	24853	25941	.	-	0	ID=cds-WP_024797293.1;Parent=gene-C9F00_RS13770;Dbxref=GenBank:WP_024797293.1;Name=WP_024797293.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9F00_RS13770;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_024797293.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	26127	26819	.	-	.	ID=gene-C9F00_RS13775;Name=C9F00_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13775;old_locus_tag=C9F00_14105
NZ_PYKC01000082.1	Protein Homology	CDS	26127	26819	.	-	0	ID=cds-WP_000642866.1;Parent=gene-C9F00_RS13775;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9F00_RS13775;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	26956	28716	.	+	.	ID=gene-C9F00_RS13780;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=C9F00_RS13780;old_locus_tag=C9F00_14110
NZ_PYKC01000082.1	Protein Homology	CDS	26956	28716	.	+	0	ID=cds-WP_135369410.1;Parent=gene-C9F00_RS13780;Dbxref=GenBank:WP_135369410.1;Name=WP_135369410.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F00_RS13780;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_135369410.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	29121	29978	.	+	.	ID=gene-C9F00_RS13785;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9F00_RS13785;old_locus_tag=C9F00_14115
NZ_PYKC01000082.1	Protein Homology	CDS	29121	29978	.	+	0	ID=cds-WP_000642539.1;Parent=gene-C9F00_RS13785;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9F00_RS13785;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	30038	32320	.	+	.	ID=gene-C9F00_RS13790;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F00_RS13790;old_locus_tag=C9F00_14120
NZ_PYKC01000082.1	Protein Homology	CDS	30038	32320	.	+	0	ID=cds-WP_001292799.1;Parent=gene-C9F00_RS13790;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9F00_RS13790;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	32392	33345	.	-	.	ID=gene-C9F00_RS13795;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9F00_RS13795;old_locus_tag=C9F00_14125
NZ_PYKC01000082.1	Protein Homology	CDS	32392	33345	.	-	0	ID=cds-WP_135369409.1;Parent=gene-C9F00_RS13795;Dbxref=GenBank:WP_135369409.1;Name=WP_135369409.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145575.1;locus_tag=C9F00_RS13795;product=type III secretion system effector SopD2;protein_id=WP_135369409.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	pseudogene	33476	33801	.	+	.	ID=gene-C9F00_RS24460;Name=C9F00_RS24460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24460;pseudo=true
NZ_PYKC01000082.1	Protein Homology	CDS	33476	33801	.	+	0	ID=cds-C9F00_RS24460;Parent=gene-C9F00_RS24460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9F00_RS24460;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	33920	34717	.	+	.	ID=gene-C9F00_RS13800;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9F00_RS13800;old_locus_tag=C9F00_14130
NZ_PYKC01000082.1	Protein Homology	CDS	33920	34717	.	+	0	ID=cds-WP_000067928.1;Parent=gene-C9F00_RS13800;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9F00_RS13800;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	35010	36431	.	-	.	ID=gene-C9F00_RS13805;Name=C9F00_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13805;old_locus_tag=C9F00_14135
NZ_PYKC01000082.1	Protein Homology	CDS	35010	36431	.	-	0	ID=cds-WP_135369408.1;Parent=gene-C9F00_RS13805;Dbxref=GenBank:WP_135369408.1;Name=WP_135369408.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9F00_RS13805;product=APC family permease;protein_id=WP_135369408.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	36649	37797	.	-	.	ID=gene-C9F00_RS13810;Name=C9F00_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13810;old_locus_tag=C9F00_14140
NZ_PYKC01000082.1	Protein Homology	CDS	36649	37797	.	-	0	ID=cds-WP_000109274.1;Parent=gene-C9F00_RS13810;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F00_RS13810;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	38147	39010	.	-	.	ID=gene-C9F00_RS13815;Name=C9F00_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13815;old_locus_tag=C9F00_14145
NZ_PYKC01000082.1	Protein Homology	CDS	38147	39010	.	-	0	ID=cds-WP_000534681.1;Parent=gene-C9F00_RS13815;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9F00_RS13815;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	39012	39629	.	-	.	ID=gene-C9F00_RS13820;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F00_RS13820;old_locus_tag=C9F00_14150
NZ_PYKC01000082.1	Protein Homology	CDS	39012	39629	.	-	0	ID=cds-WP_000213069.1;Parent=gene-C9F00_RS13820;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9F00_RS13820;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	39640	42084	.	-	.	ID=gene-C9F00_RS13825;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9F00_RS13825;old_locus_tag=C9F00_14155
NZ_PYKC01000082.1	Protein Homology	CDS	39640	42084	.	-	0	ID=cds-WP_023209544.1;Parent=gene-C9F00_RS13825;Dbxref=GenBank:WP_023209544.1;Name=WP_023209544.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9F00_RS13825;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023209544.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	42320	43612	.	-	.	ID=gene-C9F00_RS13830;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9F00_RS13830;old_locus_tag=C9F00_14160
NZ_PYKC01000082.1	Protein Homology	CDS	42320	43612	.	-	0	ID=cds-WP_000886697.1;Parent=gene-C9F00_RS13830;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9F00_RS13830;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	43871	45214	.	-	.	ID=gene-C9F00_RS13835;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9F00_RS13835;old_locus_tag=C9F00_14165
NZ_PYKC01000082.1	Protein Homology	CDS	43871	45214	.	-	0	ID=cds-WP_000067785.1;Parent=gene-C9F00_RS13835;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9F00_RS13835;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	gene	45224	45835	.	-	.	ID=gene-C9F00_RS13840;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9F00_RS13840;old_locus_tag=C9F00_14170
NZ_PYKC01000082.1	Protein Homology	CDS	45224	45835	.	-	0	ID=cds-WP_001519746.1;Parent=gene-C9F00_RS13840;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9F00_RS13840;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11
NZ_PYKC01000082.1	RefSeq	pseudogene	45978	47398	.	-	.	ID=gene-C9F00_RS13845;Name=ftsK;end_range=47398,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=C9F00_RS13845;old_locus_tag=C9F00_14175;partial=true;pseudo=true
NZ_PYKC01000082.1	Protein Homology	CDS	45978	47398	.	-	2	ID=cds-C9F00_RS13845;Parent=gene-C9F00_RS13845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=47398,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F00_RS13845;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000039.1 1 47138
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000039.1	RefSeq	region	1	47138	.	+	.	ID=NZ_PYKC01000039.1:1..47138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000039.1	RefSeq	gene	1	150	.	+	.	ID=gene-C9F00_RS06145;Name=C9F00_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06145;old_locus_tag=C9F00_06265;partial=true;start_range=.,1
NZ_PYKC01000039.1	Protein Homology	CDS	1	150	.	+	0	ID=cds-WP_023136219.1;Parent=gene-C9F00_RS06145;Dbxref=GenBank:WP_023136219.1;Name=WP_023136219.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F00_RS06145;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_023136219.1;start_range=.,1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	170	901	.	+	.	ID=gene-C9F00_RS06150;Name=C9F00_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06150;old_locus_tag=C9F00_06270
NZ_PYKC01000039.1	Protein Homology	CDS	170	901	.	+	0	ID=cds-WP_024792581.1;Parent=gene-C9F00_RS06150;Dbxref=GenBank:WP_024792581.1;Name=WP_024792581.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9F00_RS06150;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_024792581.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	935	2005	.	-	.	ID=gene-C9F00_RS06155;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=C9F00_RS06155;old_locus_tag=C9F00_06275
NZ_PYKC01000039.1	Protein Homology	CDS	935	2005	.	-	0	ID=cds-WP_000497705.1;Parent=gene-C9F00_RS06155;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9F00_RS06155;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	2098	3465	.	-	.	ID=gene-C9F00_RS06160;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9F00_RS06160;old_locus_tag=C9F00_06280
NZ_PYKC01000039.1	Protein Homology	CDS	2098	3465	.	-	0	ID=cds-WP_000716690.1;Parent=gene-C9F00_RS06160;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9F00_RS06160;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	3622	4020	.	-	.	ID=gene-C9F00_RS06165;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9F00_RS06165;old_locus_tag=C9F00_06285
NZ_PYKC01000039.1	Protein Homology	CDS	3622	4020	.	-	0	ID=cds-WP_001519074.1;Parent=gene-C9F00_RS06165;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9F00_RS06165;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	4213	5337	.	+	.	ID=gene-C9F00_RS06170;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9F00_RS06170;old_locus_tag=C9F00_06290
NZ_PYKC01000039.1	Protein Homology	CDS	4213	5337	.	+	0	ID=cds-WP_115408944.1;Parent=gene-C9F00_RS06170;Dbxref=GenBank:WP_115408944.1;Name=WP_115408944.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9F00_RS06170;product=cell division protein ZapE;protein_id=WP_115408944.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	5638	6066	.	+	.	ID=gene-C9F00_RS06175;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9F00_RS06175;old_locus_tag=C9F00_06295
NZ_PYKC01000039.1	Protein Homology	CDS	5638	6066	.	+	0	ID=cds-WP_000847559.1;Parent=gene-C9F00_RS06175;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9F00_RS06175;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	6082	6474	.	+	.	ID=gene-C9F00_RS06180;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9F00_RS06180;old_locus_tag=C9F00_06300
NZ_PYKC01000039.1	Protein Homology	CDS	6082	6474	.	+	0	ID=cds-WP_000829815.1;Parent=gene-C9F00_RS06180;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9F00_RS06180;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	6787	7425	.	+	.	ID=gene-C9F00_RS06185;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9F00_RS06185;old_locus_tag=C9F00_06305
NZ_PYKC01000039.1	Protein Homology	CDS	6787	7425	.	+	0	ID=cds-WP_135369548.1;Parent=gene-C9F00_RS06185;Dbxref=GenBank:WP_135369548.1;Name=WP_135369548.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9F00_RS06185;product=stringent starvation protein SspA;protein_id=WP_135369548.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	7431	7931	.	+	.	ID=gene-C9F00_RS06190;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9F00_RS06190;old_locus_tag=C9F00_06310
NZ_PYKC01000039.1	Protein Homology	CDS	7431	7931	.	+	0	ID=cds-WP_000366112.1;Parent=gene-C9F00_RS06190;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9F00_RS06190;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	8040	8831	.	+	.	ID=gene-C9F00_RS06195;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9F00_RS06195;old_locus_tag=C9F00_06315
NZ_PYKC01000039.1	Protein Homology	CDS	8040	8831	.	+	0	ID=cds-WP_000382926.1;Parent=gene-C9F00_RS06195;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9F00_RS06195;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	8966	9859	.	+	.	ID=gene-C9F00_RS06200;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9F00_RS06200;old_locus_tag=C9F00_06320
NZ_PYKC01000039.1	Protein Homology	CDS	8966	9859	.	+	0	ID=cds-WP_001029665.1;Parent=gene-C9F00_RS06200;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9F00_RS06200;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	9975	11465	.	+	.	ID=gene-C9F00_RS06205;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9F00_RS06205;old_locus_tag=C9F00_06325
NZ_PYKC01000039.1	Protein Homology	CDS	9975	11465	.	+	0	ID=cds-WP_000108071.1;Parent=gene-C9F00_RS06205;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9F00_RS06205;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	11512	12201	.	+	.	ID=gene-C9F00_RS06210;Name=C9F00_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06210;old_locus_tag=C9F00_06330
NZ_PYKC01000039.1	Protein Homology	CDS	11512	12201	.	+	0	ID=cds-WP_094963812.1;Parent=gene-C9F00_RS06210;Dbxref=GenBank:WP_094963812.1;Name=WP_094963812.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9F00_RS06210;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_094963812.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	12198	13073	.	+	.	ID=gene-C9F00_RS06215;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9F00_RS06215;old_locus_tag=C9F00_06335
NZ_PYKC01000039.1	Protein Homology	CDS	12198	13073	.	+	0	ID=cds-WP_000208970.1;Parent=gene-C9F00_RS06215;Dbxref=GenBank:WP_000208970.1;Name=WP_000208970.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9F00_RS06215;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	13070	13537	.	+	.	ID=gene-C9F00_RS06220;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9F00_RS06220;old_locus_tag=C9F00_06340
NZ_PYKC01000039.1	Protein Homology	CDS	13070	13537	.	+	0	ID=cds-WP_000979900.1;Parent=gene-C9F00_RS06220;Dbxref=GenBank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9F00_RS06220;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	13619	14899	.	-	.	ID=gene-C9F00_RS06225;Name=C9F00_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06225;old_locus_tag=C9F00_06345
NZ_PYKC01000039.1	Protein Homology	CDS	13619	14899	.	-	0	ID=cds-WP_135369549.1;Parent=gene-C9F00_RS06225;Dbxref=GenBank:WP_135369549.1;Name=WP_135369549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9F00_RS06225;product=cytosine deaminase;protein_id=WP_135369549.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	14886	16139	.	-	.	ID=gene-C9F00_RS06230;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9F00_RS06230;old_locus_tag=C9F00_06350
NZ_PYKC01000039.1	Protein Homology	CDS	14886	16139	.	-	0	ID=cds-WP_023232445.1;Parent=gene-C9F00_RS06230;Dbxref=GenBank:WP_023232445.1;Name=WP_023232445.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9F00_RS06230;product=cytosine permease;protein_id=WP_023232445.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	16256	17359	.	-	.	ID=gene-C9F00_RS06235;Name=C9F00_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06235;old_locus_tag=C9F00_06355
NZ_PYKC01000039.1	Protein Homology	CDS	16256	17359	.	-	0	ID=cds-WP_135369550.1;Parent=gene-C9F00_RS06235;Dbxref=GenBank:WP_135369550.1;Name=WP_135369550.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9F00_RS06235;product=PDDEXK nuclease domain-containing protein;protein_id=WP_135369550.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	17566	18984	.	-	.	ID=gene-C9F00_RS06240;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9F00_RS06240;old_locus_tag=C9F00_06360
NZ_PYKC01000039.1	Protein Homology	CDS	17566	18984	.	-	0	ID=cds-WP_000081642.1;Parent=gene-C9F00_RS06240;Dbxref=GenBank:WP_000081642.1;Name=WP_000081642.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F00_RS06240;product=glutamate synthase subunit GltD;protein_id=WP_000081642.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	18994	23454	.	-	.	ID=gene-C9F00_RS06245;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9F00_RS06245;old_locus_tag=C9F00_06365
NZ_PYKC01000039.1	Protein Homology	CDS	18994	23454	.	-	0	ID=cds-WP_135369551.1;Parent=gene-C9F00_RS06245;Dbxref=GenBank:WP_135369551.1;Name=WP_135369551.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F00_RS06245;product=glutamate synthase large subunit;protein_id=WP_135369551.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	24126	25055	.	+	.	ID=gene-C9F00_RS06250;Name=C9F00_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06250;old_locus_tag=C9F00_06375
NZ_PYKC01000039.1	Protein Homology	CDS	24126	25055	.	+	0	ID=cds-WP_080244715.1;Parent=gene-C9F00_RS06250;Dbxref=GenBank:WP_080244715.1;Name=WP_080244715.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9F00_RS06250;product=TIGR01212 family radical SAM protein;protein_id=WP_080244715.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	25149	27485	.	+	.	ID=gene-C9F00_RS06255;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=C9F00_RS06255;old_locus_tag=C9F00_06380
NZ_PYKC01000039.1	Protein Homology	CDS	25149	27485	.	+	0	ID=cds-WP_000809813.1;Parent=gene-C9F00_RS06255;Dbxref=GenBank:WP_000809813.1;Name=WP_000809813.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9F00_RS06255;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809813.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	27712	28365	.	+	.	ID=gene-C9F00_RS06260;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9F00_RS06260;old_locus_tag=C9F00_06385
NZ_PYKC01000039.1	Protein Homology	CDS	27712	28365	.	+	0	ID=cds-WP_000719811.1;Parent=gene-C9F00_RS06260;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9F00_RS06260;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	28362	29090	.	+	.	ID=gene-C9F00_RS06265;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9F00_RS06265;old_locus_tag=C9F00_06390
NZ_PYKC01000039.1	Protein Homology	CDS	28362	29090	.	+	0	ID=cds-WP_000044651.1;Parent=gene-C9F00_RS06265;Dbxref=GenBank:WP_000044651.1;Name=WP_000044651.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9F00_RS06265;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044651.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	29165	29797	.	-	.	ID=gene-C9F00_RS06270;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9F00_RS06270;old_locus_tag=C9F00_06395
NZ_PYKC01000039.1	Protein Homology	CDS	29165	29797	.	-	0	ID=cds-WP_135369552.1;Parent=gene-C9F00_RS06270;Dbxref=GenBank:WP_135369552.1;Name=WP_135369552.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9F00_RS06270;product=PhoP regulatory network protein YrbL;protein_id=WP_135369552.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	30048	30320	.	-	.	ID=gene-C9F00_RS06280;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9F00_RS06280;old_locus_tag=C9F00_06405
NZ_PYKC01000039.1	Protein Homology	CDS	30048	30320	.	-	0	ID=cds-WP_000216797.1;Parent=gene-C9F00_RS06280;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9F00_RS06280;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	30317	31171	.	-	.	ID=gene-C9F00_RS06285;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9F00_RS06285;old_locus_tag=C9F00_06410
NZ_PYKC01000039.1	Protein Homology	CDS	30317	31171	.	-	0	ID=cds-WP_000243749.1;Parent=gene-C9F00_RS06285;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9F00_RS06285;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	31217	31708	.	-	.	ID=gene-C9F00_RS06290;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9F00_RS06290;old_locus_tag=C9F00_06415
NZ_PYKC01000039.1	Protein Homology	CDS	31217	31708	.	-	0	ID=cds-WP_000609332.1;Parent=gene-C9F00_RS06290;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9F00_RS06290;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	31826	32113	.	-	.	ID=gene-C9F00_RS06295;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9F00_RS06295;old_locus_tag=C9F00_06420
NZ_PYKC01000039.1	Protein Homology	CDS	31826	32113	.	-	0	ID=cds-WP_001176589.1;Parent=gene-C9F00_RS06295;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9F00_RS06295;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	32136	33569	.	-	.	ID=gene-C9F00_RS06300;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9F00_RS06300;old_locus_tag=C9F00_06425
NZ_PYKC01000039.1	Protein Homology	CDS	32136	33569	.	-	0	ID=cds-WP_000809020.1;Parent=gene-C9F00_RS06300;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9F00_RS06300;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	33617	34342	.	-	.	ID=gene-C9F00_RS06305;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9F00_RS06305;old_locus_tag=C9F00_06430
NZ_PYKC01000039.1	Protein Homology	CDS	33617	34342	.	-	0	ID=cds-WP_000224104.1;Parent=gene-C9F00_RS06305;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9F00_RS06305;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	34349	34903	.	-	.	ID=gene-C9F00_RS06310;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9F00_RS06310;old_locus_tag=C9F00_06435
NZ_PYKC01000039.1	Protein Homology	CDS	34349	34903	.	-	0	ID=cds-WP_000669770.1;Parent=gene-C9F00_RS06310;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9F00_RS06310;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	34872	35447	.	-	.	ID=gene-C9F00_RS06315;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9F00_RS06315;old_locus_tag=C9F00_06440
NZ_PYKC01000039.1	Protein Homology	CDS	34872	35447	.	-	0	ID=cds-WP_000047845.1;Parent=gene-C9F00_RS06315;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9F00_RS06315;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	35444	36010	.	-	.	ID=gene-C9F00_RS06320;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9F00_RS06320;old_locus_tag=C9F00_06445
NZ_PYKC01000039.1	Protein Homology	CDS	35444	36010	.	-	0	ID=cds-WP_000030029.1;Parent=gene-C9F00_RS06320;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9F00_RS06320;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	36031	37017	.	-	.	ID=gene-C9F00_RS06325;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9F00_RS06325;old_locus_tag=C9F00_06450
NZ_PYKC01000039.1	Protein Homology	CDS	36031	37017	.	-	0	ID=cds-WP_000018617.1;Parent=gene-C9F00_RS06325;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9F00_RS06325;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	37031	38008	.	-	.	ID=gene-C9F00_RS06330;Name=C9F00_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06330;old_locus_tag=C9F00_06455
NZ_PYKC01000039.1	Protein Homology	CDS	37031	38008	.	-	0	ID=cds-WP_000922736.1;Parent=gene-C9F00_RS06330;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9F00_RS06330;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	38221	39033	.	+	.	ID=gene-C9F00_RS06335;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9F00_RS06335;old_locus_tag=C9F00_06460
NZ_PYKC01000039.1	Protein Homology	CDS	38221	39033	.	+	0	ID=cds-WP_000531566.1;Parent=gene-C9F00_RS06335;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9F00_RS06335;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	39041	39823	.	+	.	ID=gene-C9F00_RS06340;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9F00_RS06340;old_locus_tag=C9F00_06465
NZ_PYKC01000039.1	Protein Homology	CDS	39041	39823	.	+	0	ID=cds-WP_135492210.1;Parent=gene-C9F00_RS06340;Dbxref=GenBank:WP_135492210.1;Name=WP_135492210.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F00_RS06340;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_135492210.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	39828	40379	.	+	.	ID=gene-C9F00_RS06345;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9F00_RS06345;old_locus_tag=C9F00_06470
NZ_PYKC01000039.1	Protein Homology	CDS	39828	40379	.	+	0	ID=cds-WP_001193589.1;Parent=gene-C9F00_RS06345;Dbxref=GenBank:WP_001193589.1;Name=WP_001193589.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9F00_RS06345;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193589.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	40398	41033	.	+	.	ID=gene-C9F00_RS06350;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9F00_RS06350;old_locus_tag=C9F00_06475
NZ_PYKC01000039.1	Protein Homology	CDS	40398	41033	.	+	0	ID=cds-WP_000476467.1;Parent=gene-C9F00_RS06350;Dbxref=GenBank:WP_000476467.1;Name=WP_000476467.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9F00_RS06350;product=phospholipid-binding protein MlaC;protein_id=WP_000476467.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	41033	41329	.	+	.	ID=gene-C9F00_RS06355;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9F00_RS06355;old_locus_tag=C9F00_06480
NZ_PYKC01000039.1	Protein Homology	CDS	41033	41329	.	+	0	ID=cds-WP_000188844.1;Parent=gene-C9F00_RS06355;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9F00_RS06355;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	41517	41771	.	+	.	ID=gene-C9F00_RS06360;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9F00_RS06360;old_locus_tag=C9F00_06485
NZ_PYKC01000039.1	Protein Homology	CDS	41517	41771	.	+	0	ID=cds-WP_001518349.1;Parent=gene-C9F00_RS06360;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9F00_RS06360;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	41825	43084	.	+	.	ID=gene-C9F00_RS06365;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9F00_RS06365;old_locus_tag=C9F00_06490
NZ_PYKC01000039.1	Protein Homology	CDS	41825	43084	.	+	0	ID=cds-WP_000357288.1;Parent=gene-C9F00_RS06365;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9F00_RS06365;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	43143	43430	.	-	.	ID=gene-C9F00_RS06370;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9F00_RS06370;old_locus_tag=C9F00_06495
NZ_PYKC01000039.1	Protein Homology	CDS	43143	43430	.	-	0	ID=cds-WP_000444167.1;Parent=gene-C9F00_RS06370;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9F00_RS06370;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	43662	44633	.	-	.	ID=gene-C9F00_RS06375;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9F00_RS06375;old_locus_tag=C9F00_06500
NZ_PYKC01000039.1	Protein Homology	CDS	43662	44633	.	-	0	ID=cds-WP_001047354.1;Parent=gene-C9F00_RS06375;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9F00_RS06375;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	44891	45202	.	+	.	ID=gene-C9F00_RS06380;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9F00_RS06380;old_locus_tag=C9F00_06505
NZ_PYKC01000039.1	Protein Homology	CDS	44891	45202	.	+	0	ID=cds-WP_000271396.1;Parent=gene-C9F00_RS06380;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9F00_RS06380;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	45222	45479	.	+	.	ID=gene-C9F00_RS06385;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9F00_RS06385;old_locus_tag=C9F00_06510
NZ_PYKC01000039.1	Protein Homology	CDS	45222	45479	.	+	0	ID=cds-WP_000940593.1;Parent=gene-C9F00_RS06385;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9F00_RS06385;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	gene	45609	46574	.	+	.	ID=gene-C9F00_RS06390;Name=C9F00_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06390;old_locus_tag=C9F00_06515
NZ_PYKC01000039.1	Protein Homology	CDS	45609	46574	.	+	0	ID=cds-WP_000813052.1;Parent=gene-C9F00_RS06390;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F00_RS06390;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11
NZ_PYKC01000039.1	RefSeq	pseudogene	46590	47138	.	+	.	ID=gene-C9F00_RS06395;Name=obgE;end_range=47138,.;gbkey=Gene;gene=obgE;gene_biotype=pseudogene;gene_synonym=cgtA,obg,yhbZ;locus_tag=C9F00_RS06395;old_locus_tag=C9F00_06520;partial=true;pseudo=true
NZ_PYKC01000039.1	Protein Homology	CDS	46590	47138	.	+	0	ID=cds-C9F00_RS06395;Parent=gene-C9F00_RS06395;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=47138,.;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9F00_RS06395;partial=true;product=GTPase ObgE;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000033.1 1 47012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000033.1	RefSeq	region	1	47012	.	+	.	ID=NZ_PYKC01000033.1:1..47012;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000033.1	RefSeq	gene	13	1791	.	+	.	ID=gene-C9F00_RS05510;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9F00_RS05510;old_locus_tag=C9F00_05600
NZ_PYKC01000033.1	Protein Homology	CDS	13	1791	.	+	0	ID=cds-WP_135492185.1;Parent=gene-C9F00_RS05510;Dbxref=GenBank:WP_135492185.1;Name=WP_135492185.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F00_RS05510;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_135492185.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	1804	3105	.	+	.	ID=gene-C9F00_RS05515;Name=C9F00_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05515;old_locus_tag=C9F00_05605
NZ_PYKC01000033.1	Protein Homology	CDS	1804	3105	.	+	0	ID=cds-WP_000444883.1;Parent=gene-C9F00_RS05515;Dbxref=GenBank:WP_000444883.1;Name=WP_000444883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F00_RS05515;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444883.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	3224	3922	.	+	.	ID=gene-C9F00_RS05520;Name=C9F00_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05520;old_locus_tag=C9F00_05610
NZ_PYKC01000033.1	Protein Homology	CDS	3224	3922	.	+	0	ID=cds-WP_001005988.1;Parent=gene-C9F00_RS05520;Dbxref=GenBank:WP_001005988.1;Name=WP_001005988.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9F00_RS05520;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005988.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	4302	5381	.	+	.	ID=gene-C9F00_RS05525;Name=C9F00_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05525;old_locus_tag=C9F00_05615
NZ_PYKC01000033.1	Protein Homology	CDS	4302	5381	.	+	0	ID=cds-WP_079942541.1;Parent=gene-C9F00_RS05525;Dbxref=GenBank:WP_079942541.1;Name=WP_079942541.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9F00_RS05525;product=FecCD family ABC transporter permease;protein_id=WP_079942541.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	5381	6157	.	+	.	ID=gene-C9F00_RS05530;Name=C9F00_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05530;old_locus_tag=C9F00_05620
NZ_PYKC01000033.1	Protein Homology	CDS	5381	6157	.	+	0	ID=cds-WP_001214709.1;Parent=gene-C9F00_RS05530;Dbxref=GenBank:WP_001214709.1;Name=WP_001214709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9F00_RS05530;product=ABC transporter ATP-binding protein;protein_id=WP_001214709.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	6248	7000	.	-	.	ID=gene-C9F00_RS05535;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9F00_RS05535;old_locus_tag=C9F00_05625
NZ_PYKC01000033.1	Protein Homology	CDS	6248	7000	.	-	0	ID=cds-WP_000301556.1;Parent=gene-C9F00_RS05535;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9F00_RS05535;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	7224	8264	.	-	.	ID=gene-C9F00_RS05540;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9F00_RS05540;old_locus_tag=C9F00_05635
NZ_PYKC01000033.1	Protein Homology	CDS	7224	8264	.	-	0	ID=cds-WP_135369195.1;Parent=gene-C9F00_RS05540;Dbxref=GenBank:WP_135369195.1;Name=WP_135369195.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9F00_RS05540;product=galactose-1-epimerase;protein_id=WP_135369195.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	8258	9406	.	-	.	ID=gene-C9F00_RS05545;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9F00_RS05545;old_locus_tag=C9F00_05640
NZ_PYKC01000033.1	Protein Homology	CDS	8258	9406	.	-	0	ID=cds-WP_023221278.1;Parent=gene-C9F00_RS05545;Dbxref=GenBank:WP_023221278.1;Name=WP_023221278.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9F00_RS05545;product=galactokinase;protein_id=WP_023221278.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	9409	10455	.	-	.	ID=gene-C9F00_RS05550;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9F00_RS05550;old_locus_tag=C9F00_05645
NZ_PYKC01000033.1	Protein Homology	CDS	9409	10455	.	-	0	ID=cds-WP_000187471.1;Parent=gene-C9F00_RS05550;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9F00_RS05550;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	10466	11482	.	-	.	ID=gene-C9F00_RS05555;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9F00_RS05555;old_locus_tag=C9F00_05650
NZ_PYKC01000033.1	Protein Homology	CDS	10466	11482	.	-	0	ID=cds-WP_001265465.1;Parent=gene-C9F00_RS05555;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9F00_RS05555;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	11705	12613	.	-	.	ID=gene-C9F00_RS05560;Name=C9F00_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05560;old_locus_tag=C9F00_05655
NZ_PYKC01000033.1	Protein Homology	CDS	11705	12613	.	-	0	ID=cds-WP_135369194.1;Parent=gene-C9F00_RS05560;Dbxref=GenBank:WP_135369194.1;Name=WP_135369194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9F00_RS05560;product=DUF2167 domain-containing protein;protein_id=WP_135369194.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	12784	14259	.	-	.	ID=gene-C9F00_RS05565;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9F00_RS05565;old_locus_tag=C9F00_05660
NZ_PYKC01000033.1	Protein Homology	CDS	12784	14259	.	-	0	ID=cds-WP_020839470.1;Parent=gene-C9F00_RS05565;Dbxref=GenBank:WP_020839470.1;Name=WP_020839470.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9F00_RS05565;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_020839470.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	14327	15115	.	-	.	ID=gene-C9F00_RS05570;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9F00_RS05570;old_locus_tag=C9F00_05665
NZ_PYKC01000033.1	Protein Homology	CDS	14327	15115	.	-	0	ID=cds-WP_001147416.1;Parent=gene-C9F00_RS05570;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9F00_RS05570;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	15244	15393	.	+	.	ID=gene-C9F00_RS05575;Name=C9F00_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05575;old_locus_tag=C9F00_05670
NZ_PYKC01000033.1	Protein Homology	CDS	15244	15393	.	+	0	ID=cds-WP_000891513.1;Parent=gene-C9F00_RS05575;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9F00_RS05575;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	15560	16333	.	+	.	ID=gene-C9F00_RS05580;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9F00_RS05580;old_locus_tag=C9F00_05675
NZ_PYKC01000033.1	Protein Homology	CDS	15560	16333	.	+	0	ID=cds-WP_000951416.1;Parent=gene-C9F00_RS05580;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9F00_RS05580;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	16333	17022	.	+	.	ID=gene-C9F00_RS05585;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9F00_RS05585;old_locus_tag=C9F00_05680
NZ_PYKC01000033.1	Protein Homology	CDS	16333	17022	.	+	0	ID=cds-WP_000604026.1;Parent=gene-C9F00_RS05585;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9F00_RS05585;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	17025	18083	.	+	.	ID=gene-C9F00_RS05590;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9F00_RS05590;old_locus_tag=C9F00_05685
NZ_PYKC01000033.1	Protein Homology	CDS	17025	18083	.	+	0	ID=cds-WP_000891710.1;Parent=gene-C9F00_RS05590;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9F00_RS05590;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	18084	18902	.	-	.	ID=gene-C9F00_RS05595;Name=C9F00_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05595;old_locus_tag=C9F00_05690
NZ_PYKC01000033.1	Protein Homology	CDS	18084	18902	.	-	0	ID=cds-WP_001748281.1;Parent=gene-C9F00_RS05595;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9F00_RS05595;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	19066	20061	.	+	.	ID=gene-C9F00_RS05600;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=C9F00_RS05600;old_locus_tag=C9F00_05695
NZ_PYKC01000033.1	Protein Homology	CDS	19066	20061	.	+	0	ID=cds-WP_000815468.1;Parent=gene-C9F00_RS05600;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9F00_RS05600;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	20205	21488	.	-	.	ID=gene-C9F00_RS05605;Name=C9F00_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05605;old_locus_tag=C9F00_05700
NZ_PYKC01000033.1	Protein Homology	CDS	20205	21488	.	-	0	ID=cds-WP_001094776.1;Parent=gene-C9F00_RS05605;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9F00_RS05605;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	21726	22949	.	+	.	ID=gene-C9F00_RS05610;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9F00_RS05610;old_locus_tag=C9F00_05705
NZ_PYKC01000033.1	Protein Homology	CDS	21726	22949	.	+	0	ID=cds-WP_135369197.1;Parent=gene-C9F00_RS05610;Dbxref=GenBank:WP_135369197.1;Name=WP_135369197.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9F00_RS05610;product=imidazolonepropionase;protein_id=WP_135369197.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	22946	23887	.	+	.	ID=gene-C9F00_RS05615;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9F00_RS05615;old_locus_tag=C9F00_05710
NZ_PYKC01000033.1	Protein Homology	CDS	22946	23887	.	+	0	ID=cds-WP_000195688.1;Parent=gene-C9F00_RS05615;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9F00_RS05615;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	23932	24657	.	+	.	ID=gene-C9F00_RS05620;Name=C9F00_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05620;old_locus_tag=C9F00_05715
NZ_PYKC01000033.1	Protein Homology	CDS	23932	24657	.	+	0	ID=cds-WP_000287413.1;Parent=gene-C9F00_RS05620;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9F00_RS05620;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	24854	26539	.	+	.	ID=gene-C9F00_RS05625;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9F00_RS05625;old_locus_tag=C9F00_05720
NZ_PYKC01000033.1	Protein Homology	CDS	24854	26539	.	+	0	ID=cds-WP_001115217.1;Parent=gene-C9F00_RS05625;Dbxref=GenBank:WP_001115217.1;Name=WP_001115217.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9F00_RS05625;product=urocanate hydratase;protein_id=WP_001115217.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	26541	28061	.	+	.	ID=gene-C9F00_RS05630;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9F00_RS05630;old_locus_tag=C9F00_05725
NZ_PYKC01000033.1	Protein Homology	CDS	26541	28061	.	+	0	ID=cds-WP_135369193.1;Parent=gene-C9F00_RS05630;Dbxref=GenBank:WP_135369193.1;Name=WP_135369193.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9F00_RS05630;product=histidine ammonia-lyase;protein_id=WP_135369193.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	28146	28622	.	-	.	ID=gene-C9F00_RS05635;Name=C9F00_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05635;old_locus_tag=C9F00_05730
NZ_PYKC01000033.1	Protein Homology	CDS	28146	28622	.	-	0	ID=cds-WP_000767403.1;Parent=gene-C9F00_RS05635;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9F00_RS05635;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	28680	29969	.	-	.	ID=gene-C9F00_RS05640;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9F00_RS05640;old_locus_tag=C9F00_05735
NZ_PYKC01000033.1	Protein Homology	CDS	28680	29969	.	-	0	ID=cds-WP_000205519.1;Parent=gene-C9F00_RS05640;Dbxref=GenBank:WP_000205519.1;Name=WP_000205519.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9F00_RS05640;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205519.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	30056	31096	.	+	.	ID=gene-C9F00_RS05645;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9F00_RS05645;old_locus_tag=C9F00_05740
NZ_PYKC01000033.1	Protein Homology	CDS	30056	31096	.	+	0	ID=cds-WP_000090727.1;Parent=gene-C9F00_RS05645;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9F00_RS05645;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	31093	32250	.	+	.	ID=gene-C9F00_RS05650;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9F00_RS05650;old_locus_tag=C9F00_05745
NZ_PYKC01000033.1	Protein Homology	CDS	31093	32250	.	+	0	ID=cds-WP_135492187.1;Parent=gene-C9F00_RS05650;Dbxref=GenBank:WP_135492187.1;Name=WP_135492187.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9F00_RS05650;product=8-amino-7-oxononanoate synthase;protein_id=WP_135492187.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	32234	32989	.	+	.	ID=gene-C9F00_RS05655;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9F00_RS05655;old_locus_tag=C9F00_05750
NZ_PYKC01000033.1	Protein Homology	CDS	32234	32989	.	+	0	ID=cds-WP_000079914.1;Parent=gene-C9F00_RS05655;Dbxref=GenBank:WP_000079914.1;Name=WP_000079914.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9F00_RS05655;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079914.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	32982	33668	.	+	.	ID=gene-C9F00_RS05660;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9F00_RS05660;old_locus_tag=C9F00_05755
NZ_PYKC01000033.1	Protein Homology	CDS	32982	33668	.	+	0	ID=cds-WP_135369191.1;Parent=gene-C9F00_RS05660;Dbxref=GenBank:WP_135369191.1;Name=WP_135369191.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9F00_RS05660;product=dethiobiotin synthase;protein_id=WP_135369191.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	34319	36340	.	+	.	ID=gene-C9F00_RS05670;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9F00_RS05670;old_locus_tag=C9F00_05765
NZ_PYKC01000033.1	Protein Homology	CDS	34319	36340	.	+	0	ID=cds-WP_000042502.1;Parent=gene-C9F00_RS05670;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9F00_RS05670;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	pseudogene	36648	36822	.	+	.	ID=gene-C9F00_RS24340;Name=C9F00_RS24340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24340;pseudo=true
NZ_PYKC01000033.1	Protein Homology	CDS	36648	36822	.	+	0	ID=cds-C9F00_RS24340;Parent=gene-C9F00_RS24340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9F00_RS24340;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	36830	39097	.	+	.	ID=gene-C9F00_RS05675;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=C9F00_RS05675;old_locus_tag=C9F00_05770
NZ_PYKC01000033.1	Protein Homology	CDS	36830	39097	.	+	0	ID=cds-WP_135369190.1;Parent=gene-C9F00_RS05675;Dbxref=GenBank:WP_135369190.1;Name=WP_135369190.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F00_RS05675;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_135369190.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	39189	40097	.	-	.	ID=gene-C9F00_RS05680;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9F00_RS05680;old_locus_tag=C9F00_05775
NZ_PYKC01000033.1	Protein Homology	CDS	39189	40097	.	-	0	ID=cds-WP_135369189.1;Parent=gene-C9F00_RS05680;Dbxref=GenBank:WP_135369189.1;Name=WP_135369189.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9F00_RS05680;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_135369189.1;transl_table=11
NZ_PYKC01000033.1	cmsearch	riboswitch	40362	40506	.	+	.	ID=id-NZ_PYKC01000033.1:40362..40506;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000033.1	RefSeq	gene	40494	41483	.	+	.	ID=gene-C9F00_RS05685;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9F00_RS05685;old_locus_tag=C9F00_05780
NZ_PYKC01000033.1	Protein Homology	CDS	40494	41483	.	+	0	ID=cds-WP_000168186.1;Parent=gene-C9F00_RS05685;Dbxref=GenBank:WP_000168186.1;Name=WP_000168186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9F00_RS05685;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168186.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	41505	42017	.	+	.	ID=gene-C9F00_RS05690;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9F00_RS05690;old_locus_tag=C9F00_05785
NZ_PYKC01000033.1	Protein Homology	CDS	41505	42017	.	+	0	ID=cds-WP_000084604.1;Parent=gene-C9F00_RS05690;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9F00_RS05690;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	42020	42505	.	+	.	ID=gene-C9F00_RS05695;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9F00_RS05695;old_locus_tag=C9F00_05790
NZ_PYKC01000033.1	Protein Homology	CDS	42020	42505	.	+	0	ID=cds-WP_000080894.1;Parent=gene-C9F00_RS05695;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9F00_RS05695;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	42498	42743	.	+	.	ID=gene-C9F00_RS05700;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9F00_RS05700;old_locus_tag=C9F00_05795
NZ_PYKC01000033.1	Protein Homology	CDS	42498	42743	.	+	0	ID=cds-WP_000598596.1;Parent=gene-C9F00_RS05700;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9F00_RS05700;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	42745	43197	.	+	.	ID=gene-C9F00_RS05705;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9F00_RS05705;old_locus_tag=C9F00_05800
NZ_PYKC01000033.1	Protein Homology	CDS	42745	43197	.	+	0	ID=cds-WP_001209384.1;Parent=gene-C9F00_RS05705;Dbxref=GenBank:WP_001209384.1;Name=WP_001209384.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9F00_RS05705;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209384.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	43245	43949	.	+	.	ID=gene-C9F00_RS05710;Name=C9F00_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05710;old_locus_tag=C9F00_05805
NZ_PYKC01000033.1	Protein Homology	CDS	43245	43949	.	+	0	ID=cds-WP_000373612.1;Parent=gene-C9F00_RS05710;Dbxref=GenBank:WP_000373612.1;Name=WP_000373612.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9F00_RS05710;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373612.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	44094	44801	.	+	.	ID=gene-C9F00_RS05715;Name=C9F00_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05715;old_locus_tag=C9F00_05815
NZ_PYKC01000033.1	Protein Homology	CDS	44094	44801	.	+	0	ID=cds-WP_000529062.1;Parent=gene-C9F00_RS05715;Dbxref=GenBank:WP_000529062.1;Name=WP_000529062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9F00_RS05715;product=Bax inhibitor-1 family protein;protein_id=WP_000529062.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	44825	45433	.	+	.	ID=gene-C9F00_RS05720;Name=C9F00_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05720;old_locus_tag=C9F00_05820
NZ_PYKC01000033.1	Protein Homology	CDS	44825	45433	.	+	0	ID=cds-WP_135369196.1;Parent=gene-C9F00_RS05720;Dbxref=GenBank:WP_135369196.1;Name=WP_135369196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9F00_RS05720;product=hypothetical protein;protein_id=WP_135369196.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	45441	46001	.	+	.	ID=gene-C9F00_RS05725;Name=C9F00_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05725;old_locus_tag=C9F00_05825
NZ_PYKC01000033.1	Protein Homology	CDS	45441	46001	.	+	0	ID=cds-WP_001052197.1;Parent=gene-C9F00_RS05725;Dbxref=GenBank:WP_001052197.1;Name=WP_001052197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9F00_RS05725;product=hypothetical protein;protein_id=WP_001052197.1;transl_table=11
NZ_PYKC01000033.1	RefSeq	pseudogene	46004	46240	.	-	.	ID=gene-C9F00_RS05730;Name=C9F00_RS05730;end_range=46240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS05730;old_locus_tag=C9F00_05830;partial=true;pseudo=true
NZ_PYKC01000033.1	Protein Homology	CDS	46004	46240	.	-	0	ID=cds-C9F00_RS05730;Parent=gene-C9F00_RS05730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=46240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9F00_RS05730;partial=true;product=UPF0104 family protein;pseudo=true;transl_table=11
NZ_PYKC01000033.1	RefSeq	gene	46362	47012	.	+	.	ID=gene-C9F00_RS05735;Name=cmoA;end_range=47012,.;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9F00_RS05735;old_locus_tag=C9F00_05835;partial=true
NZ_PYKC01000033.1	Protein Homology	CDS	46362	47012	.	+	0	ID=cds-WP_135492189.1;Parent=gene-C9F00_RS05735;Dbxref=GenBank:WP_135492189.1;Name=WP_135492189.1;Ontology_term=GO:0002098;end_range=47012,.;gbkey=CDS;gene=cmoA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: protein motif:HMM:TIGR00740.1;locus_tag=C9F00_RS05735;partial=true;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_135492189.1;transl_table=11
##sequence-region NZ_PYKC01000072.1 1 45333
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000072.1	RefSeq	region	1	45333	.	+	.	ID=NZ_PYKC01000072.1:1..45333;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000072.1	RefSeq	gene	236	700	.	+	.	ID=gene-C9F00_RS12410;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9F00_RS12410;old_locus_tag=C9F00_12725
NZ_PYKC01000072.1	Protein Homology	CDS	236	700	.	+	0	ID=cds-WP_001009173.1;Parent=gene-C9F00_RS12410;Dbxref=GenBank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9F00_RS12410;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	704	988	.	-	.	ID=gene-C9F00_RS12415;Name=C9F00_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12415;old_locus_tag=C9F00_12730
NZ_PYKC01000072.1	Protein Homology	CDS	704	988	.	-	0	ID=cds-WP_000220578.1;Parent=gene-C9F00_RS12415;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9F00_RS12415;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	978	1220	.	-	.	ID=gene-C9F00_RS12420;Name=C9F00_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12420;old_locus_tag=C9F00_12735
NZ_PYKC01000072.1	Protein Homology	CDS	978	1220	.	-	0	ID=cds-WP_000212724.1;Parent=gene-C9F00_RS12420;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9F00_RS12420;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	1298	3211	.	-	.	ID=gene-C9F00_RS12425;Name=C9F00_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12425;old_locus_tag=C9F00_12740
NZ_PYKC01000072.1	Protein Homology	CDS	1298	3211	.	-	0	ID=cds-WP_058108085.1;Parent=gene-C9F00_RS12425;Dbxref=GenBank:WP_058108085.1;Name=WP_058108085.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9F00_RS12425;product=BglG family transcription antiterminator;protein_id=WP_058108085.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	3228	3968	.	-	.	ID=gene-C9F00_RS12430;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9F00_RS12430;old_locus_tag=C9F00_12745
NZ_PYKC01000072.1	Protein Homology	CDS	3228	3968	.	-	0	ID=cds-WP_135369739.1;Parent=gene-C9F00_RS12430;Dbxref=GenBank:WP_135369739.1;Name=WP_135369739.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9F00_RS12430;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_135369739.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	3965	5083	.	-	.	ID=gene-C9F00_RS12435;Name=C9F00_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12435;old_locus_tag=C9F00_12750
NZ_PYKC01000072.1	Protein Homology	CDS	3965	5083	.	-	0	ID=cds-WP_001139171.1;Parent=gene-C9F00_RS12435;Dbxref=GenBank:WP_001139171.1;Name=WP_001139171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9F00_RS12435;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139171.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	5067	6200	.	-	.	ID=gene-C9F00_RS12440;Name=C9F00_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12440;old_locus_tag=C9F00_12755
NZ_PYKC01000072.1	Protein Homology	CDS	5067	6200	.	-	0	ID=cds-WP_135369738.1;Parent=gene-C9F00_RS12440;Dbxref=GenBank:WP_135369738.1;Name=WP_135369738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9F00_RS12440;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_135369738.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	6259	6903	.	-	.	ID=gene-C9F00_RS12445;Name=C9F00_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12445;old_locus_tag=C9F00_12760
NZ_PYKC01000072.1	Protein Homology	CDS	6259	6903	.	-	0	ID=cds-WP_000392127.1;Parent=gene-C9F00_RS12445;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9F00_RS12445;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	6915	7691	.	-	.	ID=gene-C9F00_RS12450;Name=C9F00_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12450;old_locus_tag=C9F00_12765
NZ_PYKC01000072.1	Protein Homology	CDS	6915	7691	.	-	0	ID=cds-WP_000478578.1;Parent=gene-C9F00_RS12450;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9F00_RS12450;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	7714	8016	.	-	.	ID=gene-C9F00_RS12455;Name=C9F00_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12455;old_locus_tag=C9F00_12770
NZ_PYKC01000072.1	Protein Homology	CDS	7714	8016	.	-	0	ID=cds-WP_000975187.1;Parent=gene-C9F00_RS12455;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9F00_RS12455;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	pseudogene	8016	8378	.	-	.	ID=gene-C9F00_RS12460;Name=C9F00_RS12460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS12460;old_locus_tag=C9F00_12775;pseudo=true
NZ_PYKC01000072.1	Protein Homology	CDS	8016	8378	.	-	0	ID=cds-C9F00_RS12460;Parent=gene-C9F00_RS12460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9F00_RS12460;product=SFCGS family glycine-rich protein;pseudo=true;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	8389	8727	.	-	.	ID=gene-C9F00_RS12465;Name=C9F00_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12465;old_locus_tag=C9F00_12780
NZ_PYKC01000072.1	Protein Homology	CDS	8389	8727	.	-	0	ID=cds-WP_001255104.1;Parent=gene-C9F00_RS12465;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9F00_RS12465;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	9005	9391	.	-	.	ID=gene-C9F00_RS12470;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9F00_RS12470;old_locus_tag=C9F00_12785
NZ_PYKC01000072.1	Protein Homology	CDS	9005	9391	.	-	0	ID=cds-WP_001232231.1;Parent=gene-C9F00_RS12470;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9F00_RS12470;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	9490	10842	.	-	.	ID=gene-C9F00_RS12475;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=C9F00_RS12475;old_locus_tag=C9F00_12790
NZ_PYKC01000072.1	Protein Homology	CDS	9490	10842	.	-	0	ID=cds-WP_135369737.1;Parent=gene-C9F00_RS12475;Dbxref=GenBank:WP_135369737.1;Name=WP_135369737.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9F00_RS12475;product=metalloprotease PmbA;protein_id=WP_135369737.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	10938	11489	.	+	.	ID=gene-C9F00_RS12480;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=C9F00_RS12480;old_locus_tag=C9F00_12795
NZ_PYKC01000072.1	Protein Homology	CDS	10938	11489	.	+	0	ID=cds-WP_000166287.1;Parent=gene-C9F00_RS12480;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9F00_RS12480;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	11545	12429	.	-	.	ID=gene-C9F00_RS12485;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=C9F00_RS12485;old_locus_tag=C9F00_12800
NZ_PYKC01000072.1	Protein Homology	CDS	11545	12429	.	-	0	ID=cds-WP_000683955.1;Parent=gene-C9F00_RS12485;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=C9F00_RS12485;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	12482	13297	.	-	.	ID=gene-C9F00_RS12490;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=C9F00_RS12490;old_locus_tag=C9F00_12805
NZ_PYKC01000072.1	Protein Homology	CDS	12482	13297	.	-	0	ID=cds-WP_001019386.1;Parent=gene-C9F00_RS12490;Dbxref=GenBank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=C9F00_RS12490;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	13458	14684	.	-	.	ID=gene-C9F00_RS12495;Name=C9F00_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12495;old_locus_tag=C9F00_12810
NZ_PYKC01000072.1	Protein Homology	CDS	13458	14684	.	-	0	ID=cds-WP_000661780.1;Parent=gene-C9F00_RS12495;Dbxref=GenBank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=C9F00_RS12495;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	14757	15779	.	-	.	ID=gene-C9F00_RS12500;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=C9F00_RS12500;old_locus_tag=C9F00_12815
NZ_PYKC01000072.1	Protein Homology	CDS	14757	15779	.	-	0	ID=cds-WP_000736098.1;Parent=gene-C9F00_RS12500;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9F00_RS12500;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	15960	17900	.	-	.	ID=gene-C9F00_RS12505;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=C9F00_RS12505;old_locus_tag=C9F00_12820
NZ_PYKC01000072.1	Protein Homology	CDS	15960	17900	.	-	0	ID=cds-WP_000849477.1;Parent=gene-C9F00_RS12505;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=C9F00_RS12505;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	18317	20254	.	+	.	ID=gene-C9F00_RS12510;Name=C9F00_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12510;old_locus_tag=C9F00_12825
NZ_PYKC01000072.1	Protein Homology	CDS	18317	20254	.	+	0	ID=cds-WP_135369225.1;Parent=gene-C9F00_RS12510;Dbxref=GenBank:WP_135369225.1;Name=WP_135369225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=C9F00_RS12510;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_135369225.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	20315	21481	.	+	.	ID=gene-C9F00_RS12515;Name=C9F00_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12515;old_locus_tag=C9F00_12830
NZ_PYKC01000072.1	Protein Homology	CDS	20315	21481	.	+	0	ID=cds-WP_001111174.1;Parent=gene-C9F00_RS12515;Dbxref=GenBank:WP_001111174.1;Name=WP_001111174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9F00_RS12515;product=MFS transporter;protein_id=WP_001111174.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	21478	22311	.	-	.	ID=gene-C9F00_RS12520;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=C9F00_RS12520;old_locus_tag=C9F00_12835
NZ_PYKC01000072.1	Protein Homology	CDS	21478	22311	.	-	0	ID=cds-WP_023224154.1;Parent=gene-C9F00_RS12520;Dbxref=GenBank:WP_023224154.1;Name=WP_023224154.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=C9F00_RS12520;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_023224154.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	22312	23655	.	-	.	ID=gene-C9F00_RS12525;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12525;old_locus_tag=C9F00_12840
NZ_PYKC01000072.1	Protein Homology	CDS	22312	23655	.	-	0	ID=cds-WP_000678388.1;Parent=gene-C9F00_RS12525;Dbxref=GenBank:WP_000678388.1;Name=WP_000678388.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=C9F00_RS12525;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_000678388.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	23753	24763	.	-	.	ID=gene-C9F00_RS12530;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=C9F00_RS12530;old_locus_tag=C9F00_12845
NZ_PYKC01000072.1	Protein Homology	CDS	23753	24763	.	-	0	ID=cds-WP_000172704.1;Parent=gene-C9F00_RS12530;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=C9F00_RS12530;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	24782	25702	.	-	.	ID=gene-C9F00_RS12535;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=C9F00_RS12535;old_locus_tag=C9F00_12850
NZ_PYKC01000072.1	Protein Homology	CDS	24782	25702	.	-	0	ID=cds-WP_012601329.1;Parent=gene-C9F00_RS12535;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=C9F00_RS12535;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	25962	26786	.	-	.	ID=gene-C9F00_RS12540;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=C9F00_RS12540;old_locus_tag=C9F00_12855
NZ_PYKC01000072.1	Protein Homology	CDS	25962	26786	.	-	0	ID=cds-WP_000332219.1;Parent=gene-C9F00_RS12540;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=C9F00_RS12540;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	pseudogene	26909	27211	.	+	.	ID=gene-C9F00_RS12545;Name=C9F00_RS12545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS12545;old_locus_tag=C9F00_12860;pseudo=true
NZ_PYKC01000072.1	Protein Homology	CDS	26909	27211	.	+	0	ID=cds-C9F00_RS12545;Parent=gene-C9F00_RS12545;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9F00_RS12545;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	27227	28732	.	+	.	ID=gene-C9F00_RS12550;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=C9F00_RS12550;old_locus_tag=C9F00_12865
NZ_PYKC01000072.1	Protein Homology	CDS	27227	28732	.	+	0	ID=cds-WP_000450729.1;Parent=gene-C9F00_RS12550;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9F00_RS12550;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	28757	29566	.	+	.	ID=gene-C9F00_RS12555;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=C9F00_RS12555;old_locus_tag=C9F00_12870
NZ_PYKC01000072.1	Protein Homology	CDS	28757	29566	.	+	0	ID=cds-WP_000002010.1;Parent=gene-C9F00_RS12555;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=C9F00_RS12555;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	29906	31342	.	-	.	ID=gene-C9F00_RS12560;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=C9F00_RS12560;old_locus_tag=C9F00_12875
NZ_PYKC01000072.1	Protein Homology	CDS	29906	31342	.	-	0	ID=cds-WP_000083108.1;Parent=gene-C9F00_RS12560;Dbxref=GenBank:WP_000083108.1;Name=WP_000083108.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=C9F00_RS12560;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083108.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	31801	33234	.	+	.	ID=gene-C9F00_RS12570;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=C9F00_RS12570;old_locus_tag=C9F00_12885
NZ_PYKC01000072.1	Protein Homology	CDS	31801	33234	.	+	0	ID=cds-WP_000107710.1;Parent=gene-C9F00_RS12570;Dbxref=GenBank:WP_000107710.1;Name=WP_000107710.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9F00_RS12570;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107710.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	33285	34118	.	-	.	ID=gene-C9F00_RS12575;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=C9F00_RS12575;old_locus_tag=C9F00_12890
NZ_PYKC01000072.1	Protein Homology	CDS	33285	34118	.	-	0	ID=cds-WP_000033840.1;Parent=gene-C9F00_RS12575;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=C9F00_RS12575;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	34609	35988	.	-	.	ID=gene-C9F00_RS12585;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9F00_RS12585;old_locus_tag=C9F00_12900
NZ_PYKC01000072.1	Protein Homology	CDS	34609	35988	.	-	0	ID=cds-WP_001219833.1;Parent=gene-C9F00_RS12585;Dbxref=GenBank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=C9F00_RS12585;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	36163	37161	.	+	.	ID=gene-C9F00_RS12590;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9F00_RS12590;old_locus_tag=C9F00_12905
NZ_PYKC01000072.1	Protein Homology	CDS	36163	37161	.	+	0	ID=cds-WP_000853764.1;Parent=gene-C9F00_RS12590;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9F00_RS12590;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	37388	37918	.	+	.	ID=gene-C9F00_RS12595;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9F00_RS12595;old_locus_tag=C9F00_12910
NZ_PYKC01000072.1	Protein Homology	CDS	37388	37918	.	+	0	ID=cds-WP_000055079.1;Parent=gene-C9F00_RS12595;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9F00_RS12595;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	38328	39491	.	+	.	ID=gene-C9F00_RS12600;Name=C9F00_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12600;old_locus_tag=C9F00_12915
NZ_PYKC01000072.1	Protein Homology	CDS	38328	39491	.	+	0	ID=cds-WP_135419959.1;Parent=gene-C9F00_RS12600;Dbxref=GenBank:WP_135419959.1;Name=WP_135419959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9F00_RS12600;product=metallo-dependent hydrolase;protein_id=WP_135419959.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	39488	40696	.	+	.	ID=gene-C9F00_RS12605;Name=C9F00_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12605;old_locus_tag=C9F00_12920
NZ_PYKC01000072.1	Protein Homology	CDS	39488	40696	.	+	0	ID=cds-WP_000200803.1;Parent=gene-C9F00_RS12605;Dbxref=GenBank:WP_000200803.1;Name=WP_000200803.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9F00_RS12605;product=MFS transporter;protein_id=WP_000200803.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	40750	41094	.	-	.	ID=gene-C9F00_RS12610;Name=C9F00_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12610;old_locus_tag=C9F00_12925
NZ_PYKC01000072.1	Protein Homology	CDS	40750	41094	.	-	0	ID=cds-WP_001219167.1;Parent=gene-C9F00_RS12610;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9F00_RS12610;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	41097	44876	.	-	.	ID=gene-C9F00_RS12615;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9F00_RS12615;old_locus_tag=C9F00_12930
NZ_PYKC01000072.1	Protein Homology	CDS	41097	44876	.	-	0	ID=cds-WP_135369333.1;Parent=gene-C9F00_RS12615;Dbxref=GenBank:WP_135369333.1;Name=WP_135369333.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F00_RS12615;product=autotransporter assembly complex protein TamB;protein_id=WP_135369333.1;transl_table=11
NZ_PYKC01000072.1	RefSeq	gene	44873	45333	.	-	.	ID=gene-C9F00_RS12620;Name=C9F00_RS12620;end_range=45333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12620;old_locus_tag=C9F00_12935;partial=true
NZ_PYKC01000072.1	Protein Homology	CDS	44873	45333	.	-	2	ID=cds-WP_167850718.1;Parent=gene-C9F00_RS12620;Dbxref=GenBank:WP_167850718.1;Name=WP_167850718.1;Ontology_term=GO:0009306,GO:0097347;end_range=45333,.;gbkey=CDS;go_component=TAM protein secretion complex|0097347||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9F00_RS12620;partial=true;product=autotransporter assembly complex protein TamA;protein_id=WP_167850718.1;transl_table=11
##sequence-region NZ_PYKC01000122.1 1 45285
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000122.1	RefSeq	region	1	45285	.	+	.	ID=NZ_PYKC01000122.1:1..45285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000122.1	RefSeq	pseudogene	72	316	.	-	.	ID=gene-C9F00_RS18400;Name=C9F00_RS18400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18400;old_locus_tag=C9F00_18845;partial=true;pseudo=true;start_range=.,72
NZ_PYKC01000122.1	Protein Homology	CDS	72	316	.	-	0	ID=cds-C9F00_RS18400;Parent=gene-C9F00_RS18400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=C9F00_RS18400;partial=true;product=transposase;pseudo=true;start_range=.,72;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	703	2355	.	-	.	ID=gene-C9F00_RS18410;Name=gtrC1;gbkey=Gene;gene=gtrC1;gene_biotype=protein_coding;locus_tag=C9F00_RS18410;old_locus_tag=C9F00_18850
NZ_PYKC01000122.1	Protein Homology	CDS	703	2355	.	-	0	ID=cds-WP_010988978.1;Parent=gene-C9F00_RS18410;Dbxref=GenBank:WP_010988978.1;Name=WP_010988978.1;gbkey=CDS;gene=gtrC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=C9F00_RS18410;product=putative glucosyltransferase GtrC1;protein_id=WP_010988978.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	2336	3262	.	-	.	ID=gene-C9F00_RS18415;Name=C9F00_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18415;old_locus_tag=C9F00_18855
NZ_PYKC01000122.1	Protein Homology	CDS	2336	3262	.	-	0	ID=cds-WP_135369284.1;Parent=gene-C9F00_RS18415;Dbxref=GenBank:WP_135369284.1;Name=WP_135369284.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9F00_RS18415;product=glycosyltransferase family 2 protein;protein_id=WP_135369284.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	3259	3621	.	-	.	ID=gene-C9F00_RS18420;Name=C9F00_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18420;old_locus_tag=C9F00_18860
NZ_PYKC01000122.1	Protein Homology	CDS	3259	3621	.	-	0	ID=cds-WP_000915520.1;Parent=gene-C9F00_RS18420;Dbxref=GenBank:WP_000915520.1;Name=WP_000915520.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=C9F00_RS18420;product=GtrA family protein;protein_id=WP_000915520.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	4045	4290	.	-	.	ID=gene-C9F00_RS18425;Name=C9F00_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18425;old_locus_tag=C9F00_18865
NZ_PYKC01000122.1	Protein Homology	CDS	4045	4290	.	-	0	ID=cds-WP_061383624.1;Parent=gene-C9F00_RS18425;Dbxref=GenBank:WP_061383624.1;Name=WP_061383624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=C9F00_RS18425;product=hypothetical protein;protein_id=WP_061383624.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	pseudogene	4490	4669	.	-	.	ID=gene-C9F00_RS18430;Name=C9F00_RS18430;end_range=4669,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS18430;old_locus_tag=C9F00_18870;partial=true;pseudo=true
NZ_PYKC01000122.1	Protein Homology	CDS	4490	4669	.	-	0	ID=cds-C9F00_RS18430;Parent=gene-C9F00_RS18430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=C9F00_RS18430;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_PYKC01000122.1	RefSeq	pseudogene	4663	4776	.	+	.	ID=gene-C9F00_RS24120;Name=C9F00_RS24120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24120;partial=true;pseudo=true;start_range=.,4663
NZ_PYKC01000122.1	Protein Homology	CDS	4663	4776	.	+	0	ID=cds-C9F00_RS24120;Parent=gene-C9F00_RS24120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=C9F00_RS24120;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4663;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	4827	5681	.	-	.	ID=gene-C9F00_RS18435;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9F00_RS18435;old_locus_tag=C9F00_18875
NZ_PYKC01000122.1	Protein Homology	CDS	4827	5681	.	-	0	ID=cds-WP_135369285.1;Parent=gene-C9F00_RS18435;Dbxref=GenBank:WP_135369285.1;Name=WP_135369285.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9F00_RS18435;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_135369285.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	5897	7222	.	+	.	ID=gene-C9F00_RS18440;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9F00_RS18440;old_locus_tag=C9F00_18880
NZ_PYKC01000122.1	Protein Homology	CDS	5897	7222	.	+	0	ID=cds-WP_000195929.1;Parent=gene-C9F00_RS18440;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F00_RS18440;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	7379	7615	.	+	.	ID=gene-C9F00_RS18445;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9F00_RS18445;old_locus_tag=C9F00_18885
NZ_PYKC01000122.1	Protein Homology	CDS	7379	7615	.	+	0	ID=cds-WP_000922170.1;Parent=gene-C9F00_RS18445;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9F00_RS18445;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	7628	8188	.	+	.	ID=gene-C9F00_RS18450;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9F00_RS18450;old_locus_tag=C9F00_18890
NZ_PYKC01000122.1	Protein Homology	CDS	7628	8188	.	+	0	ID=cds-WP_000362177.1;Parent=gene-C9F00_RS18450;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9F00_RS18450;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	8267	9442	.	-	.	ID=gene-C9F00_RS18455;Name=C9F00_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18455;old_locus_tag=C9F00_18895
NZ_PYKC01000122.1	Protein Homology	CDS	8267	9442	.	-	0	ID=cds-WP_001033457.1;Parent=gene-C9F00_RS18455;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F00_RS18455;product=DnaJ family molecular chaperone;protein_id=WP_001033457.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	9768	11162	.	+	.	ID=gene-C9F00_RS18460;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=C9F00_RS18460;old_locus_tag=C9F00_18900
NZ_PYKC01000122.1	Protein Homology	CDS	9768	11162	.	+	0	ID=cds-WP_000786288.1;Parent=gene-C9F00_RS18460;Dbxref=GenBank:WP_000786288.1;Name=WP_000786288.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9F00_RS18460;product=phenylalanine transporter;protein_id=WP_000786288.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	11204	12451	.	-	.	ID=gene-C9F00_RS18465;Name=C9F00_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18465;old_locus_tag=C9F00_18905
NZ_PYKC01000122.1	Protein Homology	CDS	11204	12451	.	-	0	ID=cds-WP_079951149.1;Parent=gene-C9F00_RS18465;Dbxref=GenBank:WP_079951149.1;Name=WP_079951149.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9F00_RS18465;product=mechanosensitive ion channel family protein;protein_id=WP_079951149.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	12762	14732	.	+	.	ID=gene-C9F00_RS18470;Name=C9F00_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18470;old_locus_tag=C9F00_18915
NZ_PYKC01000122.1	Protein Homology	CDS	12762	14732	.	+	0	ID=cds-WP_135369286.1;Parent=gene-C9F00_RS18470;Dbxref=GenBank:WP_135369286.1;Name=WP_135369286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F00_RS18470;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135369286.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	14899	17628	.	+	.	ID=gene-C9F00_RS18475;Name=C9F00_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18475;old_locus_tag=C9F00_18920
NZ_PYKC01000122.1	Protein Homology	CDS	14899	17628	.	+	0	ID=cds-WP_135369287.1;Parent=gene-C9F00_RS18475;Dbxref=GenBank:WP_135369287.1;Name=WP_135369287.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9F00_RS18475;product=sigma 54-interacting transcriptional regulator;protein_id=WP_135369287.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	17756	18742	.	-	.	ID=gene-C9F00_RS18480;Name=C9F00_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18480;old_locus_tag=C9F00_18925
NZ_PYKC01000122.1	Protein Homology	CDS	17756	18742	.	-	0	ID=cds-WP_000109360.1;Parent=gene-C9F00_RS18480;Dbxref=GenBank:WP_000109360.1;Name=WP_000109360.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=C9F00_RS18480;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	18809	19852	.	-	.	ID=gene-C9F00_RS18485;Name=C9F00_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18485;old_locus_tag=C9F00_18930
NZ_PYKC01000122.1	Protein Homology	CDS	18809	19852	.	-	0	ID=cds-WP_023139453.1;Parent=gene-C9F00_RS18485;Dbxref=GenBank:WP_023139453.1;Name=WP_023139453.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9F00_RS18485;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_023139453.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	19885	20739	.	-	.	ID=gene-C9F00_RS18490;Name=C9F00_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18490;old_locus_tag=C9F00_18935
NZ_PYKC01000122.1	Protein Homology	CDS	19885	20739	.	-	0	ID=cds-WP_023233555.1;Parent=gene-C9F00_RS18490;Dbxref=GenBank:WP_023233555.1;Name=WP_023233555.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=C9F00_RS18490;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_023233555.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	20742	21485	.	-	.	ID=gene-C9F00_RS18495;Name=C9F00_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18495;old_locus_tag=C9F00_18940
NZ_PYKC01000122.1	Protein Homology	CDS	20742	21485	.	-	0	ID=cds-WP_000927522.1;Parent=gene-C9F00_RS18495;Dbxref=GenBank:WP_000927522.1;Name=WP_000927522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=C9F00_RS18495;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927522.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	21500	21970	.	-	.	ID=gene-C9F00_RS18500;Name=C9F00_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18500;old_locus_tag=C9F00_18945
NZ_PYKC01000122.1	Protein Homology	CDS	21500	21970	.	-	0	ID=cds-WP_000594177.1;Parent=gene-C9F00_RS18500;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=C9F00_RS18500;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	21948	22397	.	-	.	ID=gene-C9F00_RS18505;Name=C9F00_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18505;old_locus_tag=C9F00_18950
NZ_PYKC01000122.1	Protein Homology	CDS	21948	22397	.	-	0	ID=cds-WP_001216659.1;Parent=gene-C9F00_RS18505;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=C9F00_RS18505;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	22597	23250	.	-	.	ID=gene-C9F00_RS18510;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9F00_RS18510;old_locus_tag=C9F00_18955
NZ_PYKC01000122.1	Protein Homology	CDS	22597	23250	.	-	0	ID=cds-WP_000355869.1;Parent=gene-C9F00_RS18510;Dbxref=GenBank:WP_000355869.1;Name=WP_000355869.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9F00_RS18510;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355869.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	23347	23715	.	-	.	ID=gene-C9F00_RS18515;Name=C9F00_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18515;old_locus_tag=C9F00_18960
NZ_PYKC01000122.1	Protein Homology	CDS	23347	23715	.	-	0	ID=cds-WP_000348999.1;Parent=gene-C9F00_RS18515;Dbxref=GenBank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9F00_RS18515;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	23715	24296	.	-	.	ID=gene-C9F00_RS18520;Name=C9F00_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18520;old_locus_tag=C9F00_18965
NZ_PYKC01000122.1	Protein Homology	CDS	23715	24296	.	-	0	ID=cds-WP_000113609.1;Parent=gene-C9F00_RS18520;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9F00_RS18520;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	24585	24926	.	+	.	ID=gene-C9F00_RS18525;Name=C9F00_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18525;old_locus_tag=C9F00_18970
NZ_PYKC01000122.1	Protein Homology	CDS	24585	24926	.	+	0	ID=cds-WP_000155633.1;Parent=gene-C9F00_RS18525;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9F00_RS18525;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	24932	25180	.	-	.	ID=gene-C9F00_RS18530;Name=C9F00_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18530;old_locus_tag=C9F00_18975
NZ_PYKC01000122.1	Protein Homology	CDS	24932	25180	.	-	0	ID=cds-WP_000682497.1;Parent=gene-C9F00_RS18530;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9F00_RS18530;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	25247	26365	.	-	.	ID=gene-C9F00_RS18535;Name=C9F00_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18535;old_locus_tag=C9F00_18980
NZ_PYKC01000122.1	Protein Homology	CDS	25247	26365	.	-	0	ID=cds-WP_135369288.1;Parent=gene-C9F00_RS18535;Dbxref=GenBank:WP_135369288.1;Name=WP_135369288.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9F00_RS18535;product=YbdK family carboxylate-amine ligase;protein_id=WP_135369288.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	26377	27081	.	-	.	ID=gene-C9F00_RS18540;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9F00_RS18540;old_locus_tag=C9F00_18985
NZ_PYKC01000122.1	Protein Homology	CDS	26377	27081	.	-	0	ID=cds-WP_135369289.1;Parent=gene-C9F00_RS18540;Dbxref=GenBank:WP_135369289.1;Name=WP_135369289.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9F00_RS18540;product=enterobactin synthase subunit EntD;protein_id=WP_135369289.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	27128	29383	.	-	.	ID=gene-C9F00_RS18545;Name=C9F00_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18545;old_locus_tag=C9F00_18990
NZ_PYKC01000122.1	Protein Homology	CDS	27128	29383	.	-	0	ID=cds-WP_017466026.1;Parent=gene-C9F00_RS18545;Dbxref=GenBank:WP_017466026.1;Name=WP_017466026.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9F00_RS18545;product=TonB-dependent siderophore receptor;protein_id=WP_017466026.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	29572	30786	.	+	.	ID=gene-C9F00_RS18550;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9F00_RS18550;old_locus_tag=C9F00_18995
NZ_PYKC01000122.1	Protein Homology	CDS	29572	30786	.	+	0	ID=cds-WP_000656600.1;Parent=gene-C9F00_RS18550;Dbxref=GenBank:WP_000656600.1;Name=WP_000656600.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F00_RS18550;product=enterochelin esterase;protein_id=WP_000656600.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	30817	31035	.	+	.	ID=gene-C9F00_RS18555;Name=C9F00_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18555;old_locus_tag=C9F00_19000
NZ_PYKC01000122.1	Protein Homology	CDS	30817	31035	.	+	0	ID=cds-WP_000396006.1;Parent=gene-C9F00_RS18555;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9F00_RS18555;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	31032	34916	.	+	.	ID=gene-C9F00_RS18560;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9F00_RS18560;old_locus_tag=C9F00_19005
NZ_PYKC01000122.1	Protein Homology	CDS	31032	34916	.	+	0	ID=cds-WP_135369290.1;Parent=gene-C9F00_RS18560;Dbxref=GenBank:WP_135369290.1;Name=WP_135369290.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F00_RS18560;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_135369290.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	35166	36302	.	+	.	ID=gene-C9F00_RS18565;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9F00_RS18565;old_locus_tag=C9F00_19010
NZ_PYKC01000122.1	Protein Homology	CDS	35166	36302	.	+	0	ID=cds-WP_135492438.1;Parent=gene-C9F00_RS18565;Dbxref=GenBank:WP_135492438.1;Name=WP_135492438.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F00_RS18565;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_135492438.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	36355	37149	.	-	.	ID=gene-C9F00_RS18570;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9F00_RS18570;old_locus_tag=C9F00_19015
NZ_PYKC01000122.1	Protein Homology	CDS	36355	37149	.	-	0	ID=cds-WP_000140622.1;Parent=gene-C9F00_RS18570;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9F00_RS18570;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	37146	38135	.	-	.	ID=gene-C9F00_RS18575;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9F00_RS18575;old_locus_tag=C9F00_19020
NZ_PYKC01000122.1	Protein Homology	CDS	37146	38135	.	-	0	ID=cds-WP_000480067.1;Parent=gene-C9F00_RS18575;Dbxref=GenBank:WP_000480067.1;Name=WP_000480067.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9F00_RS18575;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480067.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	38135	39142	.	-	.	ID=gene-C9F00_RS18580;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9F00_RS18580;old_locus_tag=C9F00_19025
NZ_PYKC01000122.1	Protein Homology	CDS	38135	39142	.	-	0	ID=cds-WP_001277879.1;Parent=gene-C9F00_RS18580;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9F00_RS18580;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	39253	40497	.	+	.	ID=gene-C9F00_RS18585;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9F00_RS18585;old_locus_tag=C9F00_19030
NZ_PYKC01000122.1	Protein Homology	CDS	39253	40497	.	+	0	ID=cds-WP_001081661.1;Parent=gene-C9F00_RS18585;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9F00_RS18585;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	40560	41516	.	-	.	ID=gene-C9F00_RS18590;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9F00_RS18590;old_locus_tag=C9F00_19035
NZ_PYKC01000122.1	Protein Homology	CDS	40560	41516	.	-	0	ID=cds-WP_001238985.1;Parent=gene-C9F00_RS18590;Dbxref=GenBank:WP_001238985.1;Name=WP_001238985.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9F00_RS18590;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238985.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	41824	42999	.	+	.	ID=gene-C9F00_RS18595;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=C9F00_RS18595;old_locus_tag=C9F00_19040
NZ_PYKC01000122.1	Protein Homology	CDS	41824	42999	.	+	0	ID=cds-WP_135492440.1;Parent=gene-C9F00_RS18595;Dbxref=GenBank:WP_135492440.1;Name=WP_135492440.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9F00_RS18595;product=isochorismate synthase EntC;protein_id=WP_135492440.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	43009	44619	.	+	.	ID=gene-C9F00_RS18600;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F00_RS18600;old_locus_tag=C9F00_19045
NZ_PYKC01000122.1	Protein Homology	CDS	43009	44619	.	+	0	ID=cds-WP_135369419.1;Parent=gene-C9F00_RS18600;Dbxref=GenBank:WP_135369419.1;Name=WP_135369419.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9F00_RS18600;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_135369419.1;transl_table=11
NZ_PYKC01000122.1	RefSeq	gene	44633	45285	.	+	.	ID=gene-C9F00_RS18605;Name=C9F00_RS18605;end_range=45285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18605;old_locus_tag=C9F00_19050;partial=true
NZ_PYKC01000122.1	Protein Homology	CDS	44633	45285	.	+	0	ID=cds-WP_135492442.1;Parent=gene-C9F00_RS18605;Dbxref=GenBank:WP_135492442.1;Name=WP_135492442.1;end_range=45285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9F00_RS18605;partial=true;product=isochorismatase family protein;protein_id=WP_135492442.1;transl_table=11
##sequence-region NZ_PYKC01000059.1 1 44996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000059.1	RefSeq	region	1	44996	.	+	.	ID=NZ_PYKC01000059.1:1..44996;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000059.1	RefSeq	gene	1	782	.	-	.	ID=gene-C9F00_RS10035;Name=C9F00_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10035;old_locus_tag=C9F00_10270;partial=true;start_range=.,1
NZ_PYKC01000059.1	Protein Homology	CDS	1	782	.	-	0	ID=cds-WP_135492273.1;Parent=gene-C9F00_RS10035;Dbxref=GenBank:WP_135492273.1;Name=WP_135492273.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F00_RS10035;partial=true;product=MFS transporter;protein_id=WP_135492273.1;start_range=.,1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	1120	2229	.	+	.	ID=gene-C9F00_RS10040;Name=C9F00_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10040;old_locus_tag=C9F00_10275
NZ_PYKC01000059.1	Protein Homology	CDS	1120	2229	.	+	0	ID=cds-WP_000258846.1;Parent=gene-C9F00_RS10040;Dbxref=GenBank:WP_000258846.1;Name=WP_000258846.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=C9F00_RS10040;product=glycerol dehydrogenase;protein_id=WP_000258846.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	2387	3883	.	+	.	ID=gene-C9F00_RS10045;Name=C9F00_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10045;old_locus_tag=C9F00_10280
NZ_PYKC01000059.1	Protein Homology	CDS	2387	3883	.	+	0	ID=cds-WP_240776462.1;Parent=gene-C9F00_RS10045;Dbxref=GenBank:WP_240776462.1;Name=WP_240776462.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=C9F00_RS10045;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_240776462.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	3893	4438	.	+	.	ID=gene-C9F00_RS10050;Name=C9F00_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10050;old_locus_tag=C9F00_10285
NZ_PYKC01000059.1	Protein Homology	CDS	3893	4438	.	+	0	ID=cds-WP_023193670.1;Parent=gene-C9F00_RS10050;Dbxref=GenBank:WP_023193670.1;Name=WP_023193670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9F00_RS10050;product=hypothetical protein;protein_id=WP_023193670.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	4485	5993	.	-	.	ID=gene-C9F00_RS10055;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9F00_RS10055;old_locus_tag=C9F00_10290
NZ_PYKC01000059.1	Protein Homology	CDS	4485	5993	.	-	0	ID=cds-WP_000448180.1;Parent=gene-C9F00_RS10055;Dbxref=GenBank:WP_000448180.1;Name=WP_000448180.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9F00_RS10055;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448180.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	6192	6518	.	+	.	ID=gene-C9F00_RS10060;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9F00_RS10060;old_locus_tag=C9F00_10295
NZ_PYKC01000059.1	Protein Homology	CDS	6192	6518	.	+	0	ID=cds-WP_000434523.1;Parent=gene-C9F00_RS10060;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9F00_RS10060;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	6594	7424	.	+	.	ID=gene-C9F00_RS10065;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9F00_RS10065;old_locus_tag=C9F00_10300
NZ_PYKC01000059.1	Protein Homology	CDS	6594	7424	.	+	0	ID=cds-WP_135369726.1;Parent=gene-C9F00_RS10065;Dbxref=GenBank:WP_135369726.1;Name=WP_135369726.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9F00_RS10065;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_135369726.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	7518	8276	.	+	.	ID=gene-C9F00_RS10070;Name=C9F00_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10070;old_locus_tag=C9F00_10305
NZ_PYKC01000059.1	Protein Homology	CDS	7518	8276	.	+	0	ID=cds-WP_000815085.1;Parent=gene-C9F00_RS10070;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9F00_RS10070;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	8273	9856	.	-	.	ID=gene-C9F00_RS10075;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=C9F00_RS10075;old_locus_tag=C9F00_10310
NZ_PYKC01000059.1	Protein Homology	CDS	8273	9856	.	-	0	ID=cds-WP_001232871.1;Parent=gene-C9F00_RS10075;Dbxref=GenBank:WP_001232871.1;Name=WP_001232871.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9F00_RS10075;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232871.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	10046	11599	.	+	.	ID=gene-C9F00_RS10080;Name=C9F00_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10080;old_locus_tag=C9F00_10315
NZ_PYKC01000059.1	Protein Homology	CDS	10046	11599	.	+	0	ID=cds-WP_135369367.1;Parent=gene-C9F00_RS10080;Dbxref=GenBank:WP_135369367.1;Name=WP_135369367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9F00_RS10080;product=vWA domain-containing protein;protein_id=WP_135369367.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	11945	13159	.	+	.	ID=gene-C9F00_RS10085;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=C9F00_RS10085;old_locus_tag=C9F00_10320
NZ_PYKC01000059.1	Protein Homology	CDS	11945	13159	.	+	0	ID=cds-WP_001105526.1;Parent=gene-C9F00_RS10085;Dbxref=GenBank:WP_001105526.1;Name=WP_001105526.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=C9F00_RS10085;product=RNA-splicing ligase RtcB;protein_id=WP_001105526.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	13163	14197	.	+	.	ID=gene-C9F00_RS10090;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=C9F00_RS10090;old_locus_tag=C9F00_10325
NZ_PYKC01000059.1	Protein Homology	CDS	13163	14197	.	+	0	ID=cds-WP_135369366.1;Parent=gene-C9F00_RS10090;Dbxref=GenBank:WP_135369366.1;Name=WP_135369366.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=C9F00_RS10090;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_135369366.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	14194	14754	.	+	.	ID=gene-C9F00_RS10095;Name=C9F00_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10095;old_locus_tag=C9F00_10330
NZ_PYKC01000059.1	Protein Homology	CDS	14194	14754	.	+	0	ID=cds-WP_000220926.1;Parent=gene-C9F00_RS10095;Dbxref=GenBank:WP_000220926.1;Name=WP_000220926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=C9F00_RS10095;product=hypothetical protein;protein_id=WP_000220926.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	14896	17601	.	-	.	ID=gene-C9F00_RS10100;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=C9F00_RS10100;old_locus_tag=C9F00_10335
NZ_PYKC01000059.1	Protein Homology	CDS	14896	17601	.	-	0	ID=cds-WP_000907030.1;Parent=gene-C9F00_RS10100;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F00_RS10100;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	18195	20588	.	+	.	ID=gene-C9F00_RS10105;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=C9F00_RS10105;old_locus_tag=C9F00_10340
NZ_PYKC01000059.1	Protein Homology	CDS	18195	20588	.	+	0	ID=cds-WP_079834618.1;Parent=gene-C9F00_RS10105;Dbxref=GenBank:WP_079834618.1;Name=WP_079834618.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9F00_RS10105;product=maltodextrin phosphorylase;protein_id=WP_079834618.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	20598	22676	.	+	.	ID=gene-C9F00_RS10110;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9F00_RS10110;old_locus_tag=C9F00_10345
NZ_PYKC01000059.1	Protein Homology	CDS	20598	22676	.	+	0	ID=cds-WP_020838978.1;Parent=gene-C9F00_RS10110;Dbxref=GenBank:WP_020838978.1;Name=WP_020838978.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9F00_RS10110;product=4-alpha-glucanotransferase;protein_id=WP_020838978.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	22795	24111	.	-	.	ID=gene-C9F00_RS10115;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9F00_RS10115;old_locus_tag=C9F00_10350
NZ_PYKC01000059.1	Protein Homology	CDS	22795	24111	.	-	0	ID=cds-WP_001131741.1;Parent=gene-C9F00_RS10115;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9F00_RS10115;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	24488	25063	.	-	.	ID=gene-C9F00_RS10120;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9F00_RS10120;old_locus_tag=C9F00_10355
NZ_PYKC01000059.1	Protein Homology	CDS	24488	25063	.	-	0	ID=cds-WP_000619387.1;Parent=gene-C9F00_RS10120;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9F00_RS10120;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	25122	25805	.	-	.	ID=gene-C9F00_RS10125;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9F00_RS10125;old_locus_tag=C9F00_10360
NZ_PYKC01000059.1	Protein Homology	CDS	25122	25805	.	-	0	ID=cds-WP_000958733.1;Parent=gene-C9F00_RS10125;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9F00_RS10125;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	25843	26613	.	+	.	ID=gene-C9F00_RS10130;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9F00_RS10130;old_locus_tag=C9F00_10365
NZ_PYKC01000059.1	Protein Homology	CDS	25843	26613	.	+	0	ID=cds-WP_000998144.1;Parent=gene-C9F00_RS10130;Dbxref=GenBank:WP_000998144.1;Name=WP_000998144.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9F00_RS10130;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998144.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	26649	27575	.	-	.	ID=gene-C9F00_RS10135;Name=C9F00_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10135;old_locus_tag=C9F00_10370
NZ_PYKC01000059.1	Protein Homology	CDS	26649	27575	.	-	0	ID=cds-WP_023244632.1;Parent=gene-C9F00_RS10135;Dbxref=GenBank:WP_023244632.1;Name=WP_023244632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9F00_RS10135;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023244632.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	27810	28046	.	-	.	ID=gene-C9F00_RS10140;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9F00_RS10140;old_locus_tag=C9F00_10375
NZ_PYKC01000059.1	Protein Homology	CDS	27810	28046	.	-	0	ID=cds-WP_000157589.1;Parent=gene-C9F00_RS10140;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9F00_RS10140;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	28059	30377	.	-	.	ID=gene-C9F00_RS10145;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F00_RS10145;old_locus_tag=C9F00_10380
NZ_PYKC01000059.1	Protein Homology	CDS	28059	30377	.	-	0	ID=cds-WP_000736983.1;Parent=gene-C9F00_RS10145;Dbxref=GenBank:WP_000736983.1;Name=WP_000736983.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9F00_RS10145;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736983.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	30396	30623	.	-	.	ID=gene-C9F00_RS10150;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9F00_RS10150;old_locus_tag=C9F00_10385
NZ_PYKC01000059.1	Protein Homology	CDS	30396	30623	.	-	0	ID=cds-WP_001160955.1;Parent=gene-C9F00_RS10150;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9F00_RS10150;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	31060	33369	.	-	.	ID=gene-C9F00_RS10155;Name=C9F00_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10155;old_locus_tag=C9F00_10395
NZ_PYKC01000059.1	Protein Homology	CDS	31060	33369	.	-	0	ID=cds-WP_135369365.1;Parent=gene-C9F00_RS10155;Dbxref=GenBank:WP_135369365.1;Name=WP_135369365.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9F00_RS10155;product=Tex family protein;protein_id=WP_135369365.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	33468	33941	.	-	.	ID=gene-C9F00_RS10160;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9F00_RS10160;old_locus_tag=C9F00_10400
NZ_PYKC01000059.1	Protein Homology	CDS	33468	33941	.	-	0	ID=cds-WP_135369364.1;Parent=gene-C9F00_RS10160;Dbxref=GenBank:WP_135369364.1;Name=WP_135369364.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9F00_RS10160;product=transcription elongation factor GreB;protein_id=WP_135369364.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	34167	34886	.	+	.	ID=gene-C9F00_RS10165;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9F00_RS10165;old_locus_tag=C9F00_10405
NZ_PYKC01000059.1	Protein Homology	CDS	34167	34886	.	+	0	ID=cds-WP_001157751.1;Parent=gene-C9F00_RS10165;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=C9F00_RS10165;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	34883	36235	.	+	.	ID=gene-C9F00_RS10170;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=C9F00_RS10170;old_locus_tag=C9F00_10410
NZ_PYKC01000059.1	Protein Homology	CDS	34883	36235	.	+	0	ID=cds-WP_001253818.1;Parent=gene-C9F00_RS10170;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9F00_RS10170;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	36310	37929	.	-	.	ID=gene-C9F00_RS10175;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9F00_RS10175;old_locus_tag=C9F00_10415
NZ_PYKC01000059.1	Protein Homology	CDS	36310	37929	.	-	0	ID=cds-WP_001265689.1;Parent=gene-C9F00_RS10175;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9F00_RS10175;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	38309	40018	.	+	.	ID=gene-C9F00_RS10180;Name=C9F00_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS10180;old_locus_tag=C9F00_10420
NZ_PYKC01000059.1	Protein Homology	CDS	38309	40018	.	+	0	ID=cds-WP_135369363.1;Parent=gene-C9F00_RS10180;Dbxref=GenBank:WP_135369363.1;Name=WP_135369363.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9F00_RS10180;product=DUF4153 domain-containing protein;protein_id=WP_135369363.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	40129	41007	.	-	.	ID=gene-C9F00_RS10185;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9F00_RS10185;old_locus_tag=C9F00_10425
NZ_PYKC01000059.1	Protein Homology	CDS	40129	41007	.	-	0	ID=cds-WP_001135571.1;Parent=gene-C9F00_RS10185;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9F00_RS10185;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	41032	41433	.	-	.	ID=gene-C9F00_RS10190;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9F00_RS10190;old_locus_tag=C9F00_10430
NZ_PYKC01000059.1	Protein Homology	CDS	41032	41433	.	-	0	ID=cds-WP_001620580.1;Parent=gene-C9F00_RS10190;Dbxref=GenBank:WP_001620580.1;Name=WP_001620580.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9F00_RS10190;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_001620580.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	41444	42112	.	-	.	ID=gene-C9F00_RS10195;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9F00_RS10195;old_locus_tag=C9F00_10435
NZ_PYKC01000059.1	Protein Homology	CDS	41444	42112	.	-	0	ID=cds-WP_135369362.1;Parent=gene-C9F00_RS10195;Dbxref=GenBank:WP_135369362.1;Name=WP_135369362.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9F00_RS10195;product=GMP/IMP nucleotidase;protein_id=WP_135369362.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	42177	44309	.	-	.	ID=gene-C9F00_RS10200;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9F00_RS10200;old_locus_tag=C9F00_10440
NZ_PYKC01000059.1	Protein Homology	CDS	42177	44309	.	-	0	ID=cds-WP_021000848.1;Parent=gene-C9F00_RS10200;Dbxref=GenBank:WP_021000848.1;Name=WP_021000848.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9F00_RS10200;product=intracellular growth attenuator protein IgaA;protein_id=WP_021000848.1;transl_table=11
NZ_PYKC01000059.1	RefSeq	gene	44632	44996	.	+	.	ID=gene-C9F00_RS10205;Name=nudE;end_range=44996,.;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9F00_RS10205;old_locus_tag=C9F00_10445;partial=true
NZ_PYKC01000059.1	Protein Homology	CDS	44632	44996	.	+	0	ID=cds-WP_167850716.1;Parent=gene-C9F00_RS10205;Dbxref=GenBank:WP_167850716.1;Name=WP_167850716.1;Ontology_term=GO:0016787;end_range=44996,.;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=C9F00_RS10205;partial=true;product=ADP compounds hydrolase NudE;protein_id=WP_167850716.1;transl_table=11
##sequence-region NZ_PYKC01000010.1 1 44239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000010.1	RefSeq	region	1	44239	.	+	.	ID=NZ_PYKC01000010.1:1..44239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000010.1	RefSeq	gene	1	2582	.	+	.	ID=gene-C9F00_RS02485;Name=C9F00_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02485;old_locus_tag=C9F00_02525;partial=true;start_range=.,1
NZ_PYKC01000010.1	Protein Homology	CDS	1	2582	.	+	2	ID=cds-WP_245306372.1;Parent=gene-C9F00_RS02485;Dbxref=GenBank:WP_245306372.1;Name=WP_245306372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9F00_RS02485;partial=true;product=adhesion domain-containing protein;protein_id=WP_245306372.1;start_range=.,1;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	2741	2959	.	+	.	ID=gene-C9F00_RS02490;Name=C9F00_RS02490;end_range=2959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02490;old_locus_tag=C9F00_02530;partial=true;pseudo=true
NZ_PYKC01000010.1	Protein Homology	CDS	2741	2959	.	+	0	ID=cds-C9F00_RS02490;Parent=gene-C9F00_RS02490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F00_RS02490;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	3618	9590	.	+	.	ID=gene-C9F00_RS24645;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=C9F00_RS24645;old_locus_tag=C9F00_02535;pseudo=true
NZ_PYKC01000010.1	Protein Homology	CDS	3618	9590	.	+	0	ID=cds-C9F00_RS24645;Parent=gene-C9F00_RS24645;Note=internal stop;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9F00_RS24645;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	9752	11101	.	-	.	ID=gene-C9F00_RS02500;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9F00_RS02500;old_locus_tag=C9F00_02540
NZ_PYKC01000010.1	Protein Homology	CDS	9752	11101	.	-	0	ID=cds-WP_000953168.1;Parent=gene-C9F00_RS02500;Dbxref=GenBank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9F00_RS02500;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	11262	12728	.	+	.	ID=gene-C9F00_RS02505;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9F00_RS02505;old_locus_tag=C9F00_02545
NZ_PYKC01000010.1	Protein Homology	CDS	11262	12728	.	+	0	ID=cds-WP_000944174.1;Parent=gene-C9F00_RS02505;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9F00_RS02505;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	12798	14375	.	+	.	ID=gene-C9F00_RS02510;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9F00_RS02510;old_locus_tag=C9F00_02550
NZ_PYKC01000010.1	Protein Homology	CDS	12798	14375	.	+	0	ID=cds-WP_000138293.1;Parent=gene-C9F00_RS02510;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F00_RS02510;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	14511	14825	.	+	.	ID=gene-C9F00_RS02515;Name=C9F00_RS02515;end_range=14825,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02515;old_locus_tag=C9F00_02555;partial=true;pseudo=true;start_range=.,14511
NZ_PYKC01000010.1	Protein Homology	CDS	14511	14825	.	+	0	ID=cds-C9F00_RS02515;Parent=gene-C9F00_RS02515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=14825,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=C9F00_RS02515;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,14511;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	14905	15234	.	-	.	ID=gene-C9F00_RS02520;Name=C9F00_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02520;old_locus_tag=C9F00_02560
NZ_PYKC01000010.1	Protein Homology	CDS	14905	15234	.	-	0	ID=cds-WP_135369144.1;Parent=gene-C9F00_RS02520;Dbxref=GenBank:WP_135369144.1;Name=WP_135369144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9F00_RS02520;product=DUF1493 family protein;protein_id=WP_135369144.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	15219	15680	.	-	.	ID=gene-C9F00_RS24705;Name=C9F00_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24705
NZ_PYKC01000010.1	Protein Homology	CDS	15219	15680	.	-	0	ID=cds-WP_346763479.1;Parent=gene-C9F00_RS24705;Dbxref=GenBank:WP_346763479.1;Name=WP_346763479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=C9F00_RS24705;product=STM2901 family protein;protein_id=WP_346763479.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	15803	16156	.	-	.	ID=gene-C9F00_RS02530;Name=C9F00_RS02530;end_range=16156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02530;old_locus_tag=C9F00_02570;partial=true;pseudo=true;start_range=.,15803
NZ_PYKC01000010.1	Protein Homology	CDS	15803	16156	.	-	0	ID=cds-C9F00_RS02530;Parent=gene-C9F00_RS02530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9F00_RS02530;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,15803;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	16255	16347	.	-	.	ID=gene-C9F00_RS02535;Name=C9F00_RS02535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02535;old_locus_tag=C9F00_02575;partial=true;pseudo=true;start_range=.,16255
NZ_PYKC01000010.1	Protein Homology	CDS	16255	16347	.	-	0	ID=cds-C9F00_RS02535;Parent=gene-C9F00_RS02535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=C9F00_RS02535;partial=true;product=integrase;pseudo=true;start_range=.,16255;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	16473	17510	.	-	.	ID=gene-C9F00_RS02540;Name=C9F00_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02540;old_locus_tag=C9F00_02580
NZ_PYKC01000010.1	Protein Homology	CDS	16473	17510	.	-	0	ID=cds-WP_017441380.1;Parent=gene-C9F00_RS02540;Dbxref=GenBank:WP_017441380.1;Name=WP_017441380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441380.1;locus_tag=C9F00_RS02540;product=hypothetical protein;protein_id=WP_017441380.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	17594	17749	.	+	.	ID=gene-C9F00_RS24030;Name=C9F00_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24030
NZ_PYKC01000010.1	Protein Homology	CDS	17594	17749	.	+	0	ID=cds-WP_000568804.1;Parent=gene-C9F00_RS24030;Dbxref=GenBank:WP_000568804.1;Name=WP_000568804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568804.1;locus_tag=C9F00_RS24030;product=hypothetical protein;protein_id=WP_000568804.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	17753	18070	.	+	.	ID=gene-C9F00_RS24310;Name=C9F00_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24310
NZ_PYKC01000010.1	GeneMarkS-2+	CDS	17753	18070	.	+	0	ID=cds-WP_023139824.1;Parent=gene-C9F00_RS24310;Dbxref=GenBank:WP_023139824.1;Name=WP_023139824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24310;product=hypothetical protein;protein_id=WP_023139824.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	18001	18144	.	+	.	ID=gene-C9F00_RS24315;Name=C9F00_RS24315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24315;partial=true;pseudo=true;start_range=.,18001
NZ_PYKC01000010.1	Protein Homology	CDS	18001	18144	.	+	0	ID=cds-C9F00_RS24315;Parent=gene-C9F00_RS24315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9F00_RS24315;partial=true;product=hypothetical protein;pseudo=true;start_range=.,18001;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	18310	18849	.	-	.	ID=gene-C9F00_RS02550;Name=C9F00_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02550;old_locus_tag=C9F00_02590
NZ_PYKC01000010.1	Protein Homology	CDS	18310	18849	.	-	0	ID=cds-WP_000755800.1;Parent=gene-C9F00_RS02550;Dbxref=GenBank:WP_000755800.1;Name=WP_000755800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755162.1;locus_tag=C9F00_RS02550;product=DUF5384 family protein;protein_id=WP_000755800.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	18865	19383	.	-	.	ID=gene-C9F00_RS02555;Name=C9F00_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02555;old_locus_tag=C9F00_02595
NZ_PYKC01000010.1	Protein Homology	CDS	18865	19383	.	-	0	ID=cds-WP_023136450.1;Parent=gene-C9F00_RS02555;Dbxref=GenBank:WP_023136450.1;Name=WP_023136450.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=C9F00_RS02555;product=glycine zipper 2TM domain-containing protein;protein_id=WP_023136450.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	19621	19812	.	-	.	ID=gene-C9F00_RS02560;Name=C9F00_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02560;old_locus_tag=C9F00_02600
NZ_PYKC01000010.1	Protein Homology	CDS	19621	19812	.	-	0	ID=cds-WP_000075924.1;Parent=gene-C9F00_RS02560;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9F00_RS02560;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	19991	20128	.	+	.	ID=gene-C9F00_RS02565;Name=C9F00_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02565;old_locus_tag=C9F00_02605
NZ_PYKC01000010.1	Protein Homology	CDS	19991	20128	.	+	0	ID=cds-WP_001540598.1;Parent=gene-C9F00_RS02565;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9F00_RS02565;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	20225	22438	.	+	.	ID=gene-C9F00_RS02570;Name=C9F00_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02570;old_locus_tag=C9F00_02610
NZ_PYKC01000010.1	Protein Homology	CDS	20225	22438	.	+	0	ID=cds-WP_000773647.1;Parent=gene-C9F00_RS02570;Dbxref=GenBank:WP_000773647.1;Name=WP_000773647.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9F00_RS02570;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773647.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	22474	24015	.	-	.	ID=gene-C9F00_RS02575;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9F00_RS02575;old_locus_tag=C9F00_02615
NZ_PYKC01000010.1	Protein Homology	CDS	22474	24015	.	-	0	ID=cds-WP_001123330.1;Parent=gene-C9F00_RS02575;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9F00_RS02575;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	24020	26086	.	-	.	ID=gene-C9F00_RS02580;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9F00_RS02580;old_locus_tag=C9F00_02620
NZ_PYKC01000010.1	Protein Homology	CDS	24020	26086	.	-	0	ID=cds-WP_000529555.1;Parent=gene-C9F00_RS02580;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9F00_RS02580;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	26275	26913	.	-	.	ID=gene-C9F00_RS02585;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9F00_RS02585;old_locus_tag=C9F00_02625
NZ_PYKC01000010.1	Protein Homology	CDS	26275	26913	.	-	0	ID=cds-WP_001028589.1;Parent=gene-C9F00_RS02585;Dbxref=GenBank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9F00_RS02585;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	26913	27950	.	-	.	ID=gene-C9F00_RS02590;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9F00_RS02590;old_locus_tag=C9F00_02630
NZ_PYKC01000010.1	Protein Homology	CDS	26913	27950	.	-	0	ID=cds-WP_000130477.1;Parent=gene-C9F00_RS02590;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9F00_RS02590;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	28363	28989	.	+	.	ID=gene-C9F00_RS02595;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=C9F00_RS02595;old_locus_tag=C9F00_02640
NZ_PYKC01000010.1	Protein Homology	CDS	28363	28989	.	+	0	ID=cds-WP_000706208.1;Parent=gene-C9F00_RS02595;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9F00_RS02595;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	29077	30366	.	+	.	ID=gene-C9F00_RS02600;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9F00_RS02600;old_locus_tag=C9F00_02645
NZ_PYKC01000010.1	Protein Homology	CDS	29077	30366	.	+	0	ID=cds-WP_000198345.1;Parent=gene-C9F00_RS02600;Dbxref=GenBank:WP_000198345.1;Name=WP_000198345.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=C9F00_RS02600;product=uracil permease;protein_id=WP_000198345.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	30461	31162	.	+	.	ID=gene-C9F00_RS02605;Name=C9F00_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02605;old_locus_tag=C9F00_02650
NZ_PYKC01000010.1	Protein Homology	CDS	30461	31162	.	+	0	ID=cds-WP_061835882.1;Parent=gene-C9F00_RS02605;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9F00_RS02605;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	31189	31548	.	-	.	ID=gene-C9F00_RS02610;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9F00_RS02610;old_locus_tag=C9F00_02655
NZ_PYKC01000010.1	Protein Homology	CDS	31189	31548	.	-	0	ID=cds-WP_000132650.1;Parent=gene-C9F00_RS02610;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9F00_RS02610;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	31588	33051	.	-	.	ID=gene-C9F00_RS02615;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=C9F00_RS02615;old_locus_tag=C9F00_02660
NZ_PYKC01000010.1	Protein Homology	CDS	31588	33051	.	-	0	ID=cds-WP_000489630.1;Parent=gene-C9F00_RS02615;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9F00_RS02615;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	33259	34326	.	+	.	ID=gene-C9F00_RS02620;Name=C9F00_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02620;old_locus_tag=C9F00_02665
NZ_PYKC01000010.1	Protein Homology	CDS	33259	34326	.	+	0	ID=cds-WP_000892056.1;Parent=gene-C9F00_RS02620;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9F00_RS02620;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	34602	35789	.	+	.	ID=gene-C9F00_RS02625;Name=C9F00_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02625;old_locus_tag=C9F00_02670
NZ_PYKC01000010.1	Protein Homology	CDS	34602	35789	.	+	0	ID=cds-WP_135369673.1;Parent=gene-C9F00_RS02625;Dbxref=GenBank:WP_135369673.1;Name=WP_135369673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9F00_RS02625;product=sugar diacid recognition domain-containing protein;protein_id=WP_135369673.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	35857	37125	.	+	.	ID=gene-C9F00_RS02630;Name=C9F00_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02630;old_locus_tag=C9F00_02675
NZ_PYKC01000010.1	Protein Homology	CDS	35857	37125	.	+	0	ID=cds-WP_000200859.1;Parent=gene-C9F00_RS02630;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9F00_RS02630;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	37131	38270	.	+	.	ID=gene-C9F00_RS02635;Name=C9F00_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02635;old_locus_tag=C9F00_02680
NZ_PYKC01000010.1	Protein Homology	CDS	37131	38270	.	+	0	ID=cds-WP_135369674.1;Parent=gene-C9F00_RS02635;Dbxref=GenBank:WP_135369674.1;Name=WP_135369674.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9F00_RS02635;product=glycerate kinase;protein_id=WP_135369674.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	38317	38787	.	-	.	ID=gene-C9F00_RS02640;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9F00_RS02640;old_locus_tag=C9F00_02685
NZ_PYKC01000010.1	Protein Homology	CDS	38317	38787	.	-	0	ID=cds-WP_001068686.1;Parent=gene-C9F00_RS02640;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9F00_RS02640;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	38787	39359	.	-	.	ID=gene-C9F00_RS02645;Name=C9F00_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02645;old_locus_tag=C9F00_02690
NZ_PYKC01000010.1	Protein Homology	CDS	38787	39359	.	-	0	ID=cds-WP_000189061.1;Parent=gene-C9F00_RS02645;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9F00_RS02645;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	39505	40383	.	+	.	ID=gene-C9F00_RS02650;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9F00_RS02650;old_locus_tag=C9F00_02695
NZ_PYKC01000010.1	Protein Homology	CDS	39505	40383	.	+	0	ID=cds-WP_135369675.1;Parent=gene-C9F00_RS02650;Dbxref=GenBank:WP_135369675.1;Name=WP_135369675.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9F00_RS02650;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_135369675.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	40400	41434	.	+	.	ID=gene-C9F00_RS02655;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9F00_RS02655;old_locus_tag=C9F00_02700
NZ_PYKC01000010.1	Protein Homology	CDS	40400	41434	.	+	0	ID=cds-WP_000331877.1;Parent=gene-C9F00_RS02655;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9F00_RS02655;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	41609	42322	.	+	.	ID=gene-C9F00_RS02660;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=C9F00_RS02660;old_locus_tag=C9F00_02705
NZ_PYKC01000010.1	Protein Homology	CDS	41609	42322	.	+	0	ID=cds-WP_001171630.1;Parent=gene-C9F00_RS02660;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9F00_RS02660;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	gene	42453	43316	.	+	.	ID=gene-C9F00_RS02665;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=C9F00_RS02665;old_locus_tag=C9F00_02710
NZ_PYKC01000010.1	Protein Homology	CDS	42453	43316	.	+	0	ID=cds-WP_001267523.1;Parent=gene-C9F00_RS02665;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9F00_RS02665;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11
NZ_PYKC01000010.1	RefSeq	pseudogene	43332	44239	.	+	.	ID=gene-C9F00_RS02670;Name=tmcA;end_range=44239,.;gbkey=Gene;gene=tmcA;gene_biotype=pseudogene;locus_tag=C9F00_RS02670;old_locus_tag=C9F00_02715;partial=true;pseudo=true
NZ_PYKC01000010.1	Protein Homology	CDS	43332	44239	.	+	0	ID=cds-C9F00_RS02670;Parent=gene-C9F00_RS02670;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=44239,.;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9F00_RS02670;partial=true;product=tRNA cytosine(34) acetyltransferase TmcA;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000009.1 1 43683
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000009.1	RefSeq	region	1	43683	.	+	.	ID=NZ_PYKC01000009.1:1..43683;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000009.1	RefSeq	pseudogene	1	243	.	+	.	ID=gene-C9F00_RS02205;Name=C9F00_RS02205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02205;old_locus_tag=C9F00_02240;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000009.1	Protein Homology	CDS	1	243	.	+	0	ID=cds-C9F00_RS02205;Parent=gene-C9F00_RS02205;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690681.1;locus_tag=C9F00_RS02205;partial=true;product=electron transport complex subunit RsxC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	168	1226	.	+	.	ID=gene-C9F00_RS02210;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9F00_RS02210;old_locus_tag=C9F00_02245
NZ_PYKC01000009.1	Protein Homology	CDS	168	1226	.	+	0	ID=cds-WP_000231891.1;Parent=gene-C9F00_RS02210;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9F00_RS02210;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	1230	1850	.	+	.	ID=gene-C9F00_RS02215;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9F00_RS02215;old_locus_tag=C9F00_02250
NZ_PYKC01000009.1	Protein Homology	CDS	1230	1850	.	+	0	ID=cds-WP_000920822.1;Parent=gene-C9F00_RS02215;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9F00_RS02215;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	1853	2545	.	+	.	ID=gene-C9F00_RS02220;Name=C9F00_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02220;old_locus_tag=C9F00_02255
NZ_PYKC01000009.1	Protein Homology	CDS	1853	2545	.	+	0	ID=cds-WP_001289628.1;Parent=gene-C9F00_RS02220;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9F00_RS02220;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	2545	3180	.	+	.	ID=gene-C9F00_RS02225;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9F00_RS02225;old_locus_tag=C9F00_02260
NZ_PYKC01000009.1	Protein Homology	CDS	2545	3180	.	+	0	ID=cds-WP_001030318.1;Parent=gene-C9F00_RS02225;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F00_RS02225;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	3782	5287	.	+	.	ID=gene-C9F00_RS02230;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9F00_RS02230;old_locus_tag=C9F00_02265
NZ_PYKC01000009.1	Protein Homology	CDS	3782	5287	.	+	0	ID=cds-WP_000100911.1;Parent=gene-C9F00_RS02230;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9F00_RS02230;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	5392	5997	.	+	.	ID=gene-C9F00_RS02235;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9F00_RS02235;old_locus_tag=C9F00_02270
NZ_PYKC01000009.1	Protein Homology	CDS	5392	5997	.	+	0	ID=cds-WP_000765727.1;Parent=gene-C9F00_RS02235;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9F00_RS02235;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	6056	6916	.	-	.	ID=gene-C9F00_RS02240;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9F00_RS02240;old_locus_tag=C9F00_02275
NZ_PYKC01000009.1	Protein Homology	CDS	6056	6916	.	-	0	ID=cds-WP_000789736.1;Parent=gene-C9F00_RS02240;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9F00_RS02240;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	6976	8250	.	-	.	ID=gene-C9F00_RS02245;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9F00_RS02245;old_locus_tag=C9F00_02280
NZ_PYKC01000009.1	Protein Homology	CDS	6976	8250	.	-	0	ID=cds-WP_000168626.1;Parent=gene-C9F00_RS02245;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9F00_RS02245;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	8377	9033	.	-	.	ID=gene-C9F00_RS02250;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9F00_RS02250;old_locus_tag=C9F00_02285
NZ_PYKC01000009.1	Protein Homology	CDS	8377	9033	.	-	0	ID=cds-WP_001282334.1;Parent=gene-C9F00_RS02250;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9F00_RS02250;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	9092	9421	.	-	.	ID=gene-C9F00_RS02255;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9F00_RS02255;old_locus_tag=C9F00_02290
NZ_PYKC01000009.1	Protein Homology	CDS	9092	9421	.	-	0	ID=cds-WP_001132086.1;Parent=gene-C9F00_RS02255;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9F00_RS02255;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	9509	10630	.	-	.	ID=gene-C9F00_RS02260;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9F00_RS02260;old_locus_tag=C9F00_02295
NZ_PYKC01000009.1	Protein Homology	CDS	9509	10630	.	-	0	ID=cds-WP_000835021.1;Parent=gene-C9F00_RS02260;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9F00_RS02260;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	10903	11370	.	+	.	ID=gene-C9F00_RS02265;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9F00_RS02265;old_locus_tag=C9F00_02300
NZ_PYKC01000009.1	Protein Homology	CDS	10903	11370	.	+	0	ID=cds-WP_000597179.1;Parent=gene-C9F00_RS02265;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9F00_RS02265;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	11418	11858	.	-	.	ID=gene-C9F00_RS02270;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9F00_RS02270;old_locus_tag=C9F00_02305
NZ_PYKC01000009.1	Protein Homology	CDS	11418	11858	.	-	0	ID=cds-WP_000764551.1;Parent=gene-C9F00_RS02270;Dbxref=GenBank:WP_000764551.1;Name=WP_000764551.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9F00_RS02270;product=transcriptional regulator SlyA;protein_id=WP_000764551.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	12053	12289	.	+	.	ID=gene-C9F00_RS02275;Name=C9F00_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02275;old_locus_tag=C9F00_02310
NZ_PYKC01000009.1	Protein Homology	CDS	12053	12289	.	+	0	ID=cds-WP_000649755.1;Parent=gene-C9F00_RS02275;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9F00_RS02275;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	12292	13152	.	+	.	ID=gene-C9F00_RS02280;Name=C9F00_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02280;old_locus_tag=C9F00_02315
NZ_PYKC01000009.1	Protein Homology	CDS	12292	13152	.	+	0	ID=cds-WP_206188111.1;Parent=gene-C9F00_RS02280;Dbxref=GenBank:WP_206188111.1;Name=WP_206188111.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9F00_RS02280;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_206188111.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	pseudogene	13152	15191	.	+	.	ID=gene-C9F00_RS02285;Name=C9F00_RS02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS02285;old_locus_tag=C9F00_02320;pseudo=true
NZ_PYKC01000009.1	Protein Homology	CDS	13152	15191	.	+	0	ID=cds-C9F00_RS02285;Parent=gene-C9F00_RS02285;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9F00_RS02285;product=FUSC family protein;pseudo=true;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	15167	15688	.	-	.	ID=gene-C9F00_RS02290;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9F00_RS02290;old_locus_tag=C9F00_02325
NZ_PYKC01000009.1	Protein Homology	CDS	15167	15688	.	-	0	ID=cds-WP_000826820.1;Parent=gene-C9F00_RS02290;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9F00_RS02290;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	15768	16664	.	-	.	ID=gene-C9F00_RS02295;Name=C9F00_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02295;old_locus_tag=C9F00_02330
NZ_PYKC01000009.1	Protein Homology	CDS	15768	16664	.	-	0	ID=cds-WP_000250721.1;Parent=gene-C9F00_RS02295;Dbxref=GenBank:WP_000250721.1;Name=WP_000250721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9F00_RS02295;product=aldo/keto reductase;protein_id=WP_000250721.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	16715	16954	.	-	.	ID=gene-C9F00_RS02300;Name=C9F00_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02300;old_locus_tag=C9F00_02335
NZ_PYKC01000009.1	Protein Homology	CDS	16715	16954	.	-	0	ID=cds-WP_001538148.1;Parent=gene-C9F00_RS02300;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9F00_RS02300;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	17057	17656	.	+	.	ID=gene-C9F00_RS02305;Name=C9F00_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02305;old_locus_tag=C9F00_02340
NZ_PYKC01000009.1	Protein Homology	CDS	17057	17656	.	+	0	ID=cds-WP_001660120.1;Parent=gene-C9F00_RS02305;Dbxref=GenBank:WP_001660120.1;Name=WP_001660120.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9F00_RS02305;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001660120.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	17715	18812	.	+	.	ID=gene-C9F00_RS02310;Name=C9F00_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02310;old_locus_tag=C9F00_02345
NZ_PYKC01000009.1	Protein Homology	CDS	17715	18812	.	+	0	ID=cds-WP_135369644.1;Parent=gene-C9F00_RS02310;Dbxref=GenBank:WP_135369644.1;Name=WP_135369644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9F00_RS02310;product=alkene reductase;protein_id=WP_135369644.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	18881	19288	.	+	.	ID=gene-C9F00_RS02315;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9F00_RS02315;old_locus_tag=C9F00_02350
NZ_PYKC01000009.1	Protein Homology	CDS	18881	19288	.	+	0	ID=cds-WP_001237787.1;Parent=gene-C9F00_RS02315;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9F00_RS02315;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	19389	20036	.	+	.	ID=gene-C9F00_RS02320;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9F00_RS02320;old_locus_tag=C9F00_02355
NZ_PYKC01000009.1	Protein Homology	CDS	19389	20036	.	+	0	ID=cds-WP_001282267.1;Parent=gene-C9F00_RS02320;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9F00_RS02320;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	20114	20461	.	-	.	ID=gene-C9F00_RS02330;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9F00_RS02330;old_locus_tag=C9F00_02365
NZ_PYKC01000009.1	Protein Homology	CDS	20114	20461	.	-	0	ID=cds-WP_000108176.1;Parent=gene-C9F00_RS02330;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9F00_RS02330;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	20796	21617	.	+	.	ID=gene-C9F00_RS02335;Name=C9F00_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02335;old_locus_tag=C9F00_02370
NZ_PYKC01000009.1	Protein Homology	CDS	20796	21617	.	+	0	ID=cds-WP_210114155.1;Parent=gene-C9F00_RS02335;Dbxref=GenBank:WP_210114155.1;Name=WP_210114155.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9F00_RS02335;product=C40 family peptidase;protein_id=WP_210114155.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	21744	22325	.	+	.	ID=gene-C9F00_RS02340;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=C9F00_RS02340;old_locus_tag=C9F00_02375
NZ_PYKC01000009.1	Protein Homology	CDS	21744	22325	.	+	0	ID=cds-WP_135369642.1;Parent=gene-C9F00_RS02340;Dbxref=GenBank:WP_135369642.1;Name=WP_135369642.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9F00_RS02340;product=superoxide dismutase [Fe];protein_id=WP_135369642.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	22408	22497	.	-	.	ID=gene-C9F00_RS02345;Name=C9F00_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02345;old_locus_tag=C9F00_02380
NZ_PYKC01000009.1	Protein Homology	CDS	22408	22497	.	-	0	ID=cds-WP_000102277.1;Parent=gene-C9F00_RS02345;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9F00_RS02345;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	22793	23818	.	+	.	ID=gene-C9F00_RS02350;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9F00_RS02350;old_locus_tag=C9F00_02390
NZ_PYKC01000009.1	Protein Homology	CDS	22793	23818	.	+	0	ID=cds-WP_000190993.1;Parent=gene-C9F00_RS02350;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9F00_RS02350;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	23815	24747	.	-	.	ID=gene-C9F00_RS02355;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=C9F00_RS02355;old_locus_tag=C9F00_02395
NZ_PYKC01000009.1	Protein Homology	CDS	23815	24747	.	-	0	ID=cds-WP_000269523.1;Parent=gene-C9F00_RS02355;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F00_RS02355;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	24860	26065	.	+	.	ID=gene-C9F00_RS02360;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=C9F00_RS02360;old_locus_tag=C9F00_02400
NZ_PYKC01000009.1	Protein Homology	CDS	24860	26065	.	+	0	ID=cds-WP_001182316.1;Parent=gene-C9F00_RS02360;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9F00_RS02360;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	26355	27503	.	+	.	ID=gene-C9F00_RS02365;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9F00_RS02365;old_locus_tag=C9F00_02405
NZ_PYKC01000009.1	Protein Homology	CDS	26355	27503	.	+	0	ID=cds-WP_000098878.1;Parent=gene-C9F00_RS02365;Dbxref=GenBank:WP_000098878.1;Name=WP_000098878.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9F00_RS02365;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098878.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	27545	28186	.	-	.	ID=gene-C9F00_RS02370;Name=C9F00_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02370;old_locus_tag=C9F00_02410
NZ_PYKC01000009.1	Protein Homology	CDS	27545	28186	.	-	0	ID=cds-WP_135369641.1;Parent=gene-C9F00_RS02370;Dbxref=GenBank:WP_135369641.1;Name=WP_135369641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9F00_RS02370;product=riboflavin synthase subunit alpha;protein_id=WP_135369641.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	28403	29776	.	+	.	ID=gene-C9F00_RS02375;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9F00_RS02375;old_locus_tag=C9F00_02415
NZ_PYKC01000009.1	Protein Homology	CDS	28403	29776	.	+	0	ID=cds-WP_001175077.1;Parent=gene-C9F00_RS02375;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9F00_RS02375;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	29928	30004	.	+	.	ID=gene-C9F00_RS02380;Name=C9F00_RS02380;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS02380;old_locus_tag=C9F00_02420
NZ_PYKC01000009.1	tRNAscan-SE	tRNA	29928	30004	.	+	.	ID=rna-C9F00_RS02380;Parent=gene-C9F00_RS02380;anticodon=(pos:29962..29964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS02380;product=tRNA-Val
NZ_PYKC01000009.1	tRNAscan-SE	exon	29928	30004	.	+	.	ID=exon-C9F00_RS02380-1;Parent=rna-C9F00_RS02380;anticodon=(pos:29962..29964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS02380;product=tRNA-Val
NZ_PYKC01000009.1	RefSeq	gene	30015	30091	.	+	.	ID=gene-C9F00_RS02385;Name=C9F00_RS02385;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS02385;old_locus_tag=C9F00_02425
NZ_PYKC01000009.1	tRNAscan-SE	tRNA	30015	30091	.	+	.	ID=rna-C9F00_RS02385;Parent=gene-C9F00_RS02385;anticodon=(pos:30049..30051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS02385;product=tRNA-Val
NZ_PYKC01000009.1	tRNAscan-SE	exon	30015	30091	.	+	.	ID=exon-C9F00_RS02385-1;Parent=rna-C9F00_RS02385;anticodon=(pos:30049..30051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS02385;product=tRNA-Val
NZ_PYKC01000009.1	RefSeq	gene	30248	31306	.	-	.	ID=gene-C9F00_RS02390;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9F00_RS02390;old_locus_tag=C9F00_02430
NZ_PYKC01000009.1	Protein Homology	CDS	30248	31306	.	-	0	ID=cds-WP_001291715.1;Parent=gene-C9F00_RS02390;Dbxref=GenBank:WP_001291715.1;Name=WP_001291715.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9F00_RS02390;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291715.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	31303	32082	.	-	.	ID=gene-C9F00_RS02395;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9F00_RS02395;old_locus_tag=C9F00_02435
NZ_PYKC01000009.1	Protein Homology	CDS	31303	32082	.	-	0	ID=cds-WP_000068762.1;Parent=gene-C9F00_RS02395;Dbxref=GenBank:WP_000068762.1;Name=WP_000068762.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9F00_RS02395;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068762.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	32083	32349	.	-	.	ID=gene-C9F00_RS02400;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9F00_RS02400;old_locus_tag=C9F00_02440
NZ_PYKC01000009.1	Protein Homology	CDS	32083	32349	.	-	0	ID=cds-WP_000999982.1;Parent=gene-C9F00_RS02400;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9F00_RS02400;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	32346	32993	.	-	.	ID=gene-C9F00_RS02405;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9F00_RS02405;old_locus_tag=C9F00_02445
NZ_PYKC01000009.1	Protein Homology	CDS	32346	32993	.	-	0	ID=cds-WP_000056367.1;Parent=gene-C9F00_RS02405;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9F00_RS02405;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	33061	34029	.	-	.	ID=gene-C9F00_RS02410;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9F00_RS02410;old_locus_tag=C9F00_02450
NZ_PYKC01000009.1	Protein Homology	CDS	33061	34029	.	-	0	ID=cds-WP_135369640.1;Parent=gene-C9F00_RS02410;Dbxref=GenBank:WP_135369640.1;Name=WP_135369640.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9F00_RS02410;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_135369640.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	34010	34384	.	-	.	ID=gene-C9F00_RS02415;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9F00_RS02415;old_locus_tag=C9F00_02455
NZ_PYKC01000009.1	Protein Homology	CDS	34010	34384	.	-	0	ID=cds-WP_076735671.1;Parent=gene-C9F00_RS02415;Dbxref=GenBank:WP_076735671.1;Name=WP_076735671.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9F00_RS02415;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_076735671.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	34365	34742	.	-	.	ID=gene-C9F00_RS02420;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9F00_RS02420;old_locus_tag=C9F00_02460
NZ_PYKC01000009.1	Protein Homology	CDS	34365	34742	.	-	0	ID=cds-WP_135369639.1;Parent=gene-C9F00_RS02420;Dbxref=GenBank:WP_135369639.1;Name=WP_135369639.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9F00_RS02420;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_135369639.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	34745	36046	.	-	.	ID=gene-C9F00_RS02425;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9F00_RS02425;old_locus_tag=C9F00_02465
NZ_PYKC01000009.1	Protein Homology	CDS	34745	36046	.	-	0	ID=cds-WP_000787210.1;Parent=gene-C9F00_RS02425;Dbxref=GenBank:WP_000787210.1;Name=WP_000787210.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9F00_RS02425;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787210.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	36036	38081	.	-	.	ID=gene-C9F00_RS02430;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9F00_RS02430;old_locus_tag=C9F00_02470
NZ_PYKC01000009.1	Protein Homology	CDS	36036	38081	.	-	0	ID=cds-WP_001258221.1;Parent=gene-C9F00_RS02430;Dbxref=GenBank:WP_001258221.1;Name=WP_001258221.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9F00_RS02430;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258221.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	38066	38434	.	-	.	ID=gene-C9F00_RS02435;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9F00_RS02435;old_locus_tag=C9F00_02475
NZ_PYKC01000009.1	Protein Homology	CDS	38066	38434	.	-	0	ID=cds-WP_000383700.1;Parent=gene-C9F00_RS02435;Dbxref=GenBank:WP_000383700.1;Name=WP_000383700.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9F00_RS02435;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383700.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	38492	39508	.	-	.	ID=gene-C9F00_RS02440;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9F00_RS02440;old_locus_tag=C9F00_02480
NZ_PYKC01000009.1	Protein Homology	CDS	38492	39508	.	-	0	ID=cds-WP_135369638.1;Parent=gene-C9F00_RS02440;Dbxref=GenBank:WP_135369638.1;Name=WP_135369638.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9F00_RS02440;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_135369638.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	39474	40148	.	-	.	ID=gene-C9F00_RS02445;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9F00_RS02445;old_locus_tag=C9F00_02485
NZ_PYKC01000009.1	Protein Homology	CDS	39474	40148	.	-	0	ID=cds-WP_135369637.1;Parent=gene-C9F00_RS02445;Dbxref=GenBank:WP_135369637.1;Name=WP_135369637.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9F00_RS02445;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_135369637.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	40145	40693	.	-	.	ID=gene-C9F00_RS02450;Name=C9F00_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02450;old_locus_tag=C9F00_02490
NZ_PYKC01000009.1	Protein Homology	CDS	40145	40693	.	-	0	ID=cds-WP_001531605.1;Parent=gene-C9F00_RS02450;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9F00_RS02450;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	40711	41460	.	-	.	ID=gene-C9F00_RS02455;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS02455;old_locus_tag=C9F00_02495
NZ_PYKC01000009.1	Protein Homology	CDS	40711	41460	.	-	0	ID=cds-WP_023258851.1;Parent=gene-C9F00_RS02455;Dbxref=GenBank:WP_023258851.1;Name=WP_023258851.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9F00_RS02455;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_023258851.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	41457	41705	.	-	.	ID=gene-C9F00_RS02460;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9F00_RS02460;old_locus_tag=C9F00_02500
NZ_PYKC01000009.1	Protein Homology	CDS	41457	41705	.	-	0	ID=cds-WP_001562742.1;Parent=gene-C9F00_RS02460;Dbxref=GenBank:WP_001562742.1;Name=WP_001562742.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=C9F00_RS02460;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001562742.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	41717	42007	.	-	.	ID=gene-C9F00_RS02465;Name=C9F00_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02465;old_locus_tag=C9F00_02505
NZ_PYKC01000009.1	Protein Homology	CDS	41717	42007	.	-	0	ID=cds-WP_000444713.1;Parent=gene-C9F00_RS02465;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9F00_RS02465;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	41985	42200	.	-	.	ID=gene-C9F00_RS02470;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9F00_RS02470;old_locus_tag=C9F00_02510
NZ_PYKC01000009.1	Protein Homology	CDS	41985	42200	.	-	0	ID=cds-WP_000350226.1;Parent=gene-C9F00_RS02470;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9F00_RS02470;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	42294	42983	.	-	.	ID=gene-C9F00_RS02475;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9F00_RS02475;old_locus_tag=C9F00_02515
NZ_PYKC01000009.1	Protein Homology	CDS	42294	42983	.	-	0	ID=cds-WP_135369636.1;Parent=gene-C9F00_RS02475;Dbxref=GenBank:WP_135369636.1;Name=WP_135369636.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9F00_RS02475;product=pathogenicity island 2 effector protein SseG;protein_id=WP_135369636.1;transl_table=11
NZ_PYKC01000009.1	RefSeq	gene	42980	43683	.	-	.	ID=gene-C9F00_RS02480;Name=sseF;end_range=43683,.;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9F00_RS02480;old_locus_tag=C9F00_02520;partial=true
NZ_PYKC01000009.1	Protein Homology	CDS	42980	43683	.	-	2	ID=cds-WP_135492104.1;Parent=gene-C9F00_RS02480;Dbxref=GenBank:WP_135492104.1;Name=WP_135492104.1;end_range=43683,.;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9F00_RS02480;partial=true;product=type III secretion systems effector SseF;protein_id=WP_135492104.1;transl_table=11
##sequence-region NZ_PYKC01000056.1 1 42227
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000056.1	RefSeq	region	1	42227	.	+	.	ID=NZ_PYKC01000056.1:1..42227;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000056.1	RefSeq	gene	1	826	.	-	.	ID=gene-C9F00_RS09235;Name=C9F00_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09235;old_locus_tag=C9F00_09435;partial=true;start_range=.,1
NZ_PYKC01000056.1	Protein Homology	CDS	1	826	.	-	0	ID=cds-WP_135492259.1;Parent=gene-C9F00_RS09235;Dbxref=GenBank:WP_135492259.1;Name=WP_135492259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F00_RS09235;partial=true;product=DUF2813 domain-containing protein;protein_id=WP_135492259.1;start_range=.,1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	1028	1927	.	+	.	ID=gene-C9F00_RS09240;Name=C9F00_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09240;old_locus_tag=C9F00_09445
NZ_PYKC01000056.1	Protein Homology	CDS	1028	1927	.	+	0	ID=cds-WP_135369247.1;Parent=gene-C9F00_RS09240;Dbxref=GenBank:WP_135369247.1;Name=WP_135369247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9F00_RS09240;product=lysine exporter LysO family protein;protein_id=WP_135369247.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	2071	3723	.	+	.	ID=gene-C9F00_RS09245;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9F00_RS09245;old_locus_tag=C9F00_09450
NZ_PYKC01000056.1	Protein Homology	CDS	2071	3723	.	+	0	ID=cds-WP_000458785.1;Parent=gene-C9F00_RS09245;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F00_RS09245;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	3735	4703	.	+	.	ID=gene-C9F00_RS09250;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9F00_RS09250;old_locus_tag=C9F00_09455
NZ_PYKC01000056.1	Protein Homology	CDS	3735	4703	.	+	0	ID=cds-WP_023216393.1;Parent=gene-C9F00_RS09250;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9F00_RS09250;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	4861	6579	.	+	.	ID=gene-C9F00_RS09255;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=C9F00_RS09255;old_locus_tag=C9F00_09460
NZ_PYKC01000056.1	Protein Homology	CDS	4861	6579	.	+	0	ID=cds-WP_000815324.1;Parent=gene-C9F00_RS09255;Dbxref=GenBank:WP_000815324.1;Name=WP_000815324.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9F00_RS09255;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815324.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	6618	7619	.	+	.	ID=gene-C9F00_RS09260;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=C9F00_RS09260;old_locus_tag=C9F00_09465
NZ_PYKC01000056.1	Protein Homology	CDS	6618	7619	.	+	0	ID=cds-WP_000566346.1;Parent=gene-C9F00_RS09260;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9F00_RS09260;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	7630	9063	.	+	.	ID=gene-C9F00_RS09265;Name=C9F00_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09265;old_locus_tag=C9F00_09470
NZ_PYKC01000056.1	Protein Homology	CDS	7630	9063	.	+	0	ID=cds-WP_135369248.1;Parent=gene-C9F00_RS09265;Dbxref=GenBank:WP_135369248.1;Name=WP_135369248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9F00_RS09265;product=SDR family oxidoreductase;protein_id=WP_135369248.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	9159	10172	.	+	.	ID=gene-C9F00_RS09270;Name=C9F00_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09270;old_locus_tag=C9F00_09475
NZ_PYKC01000056.1	Protein Homology	CDS	9159	10172	.	+	0	ID=cds-WP_000866905.1;Parent=gene-C9F00_RS09270;Dbxref=GenBank:WP_000866905.1;Name=WP_000866905.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9F00_RS09270;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866905.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	10169	10999	.	-	.	ID=gene-C9F00_RS09275;Name=C9F00_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09275;old_locus_tag=C9F00_09480
NZ_PYKC01000056.1	Protein Homology	CDS	10169	10999	.	-	0	ID=cds-WP_000645850.1;Parent=gene-C9F00_RS09275;Dbxref=GenBank:WP_000645850.1;Name=WP_000645850.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9F00_RS09275;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	10996	11319	.	-	.	ID=gene-C9F00_RS09280;Name=C9F00_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09280;old_locus_tag=C9F00_09485
NZ_PYKC01000056.1	Protein Homology	CDS	10996	11319	.	-	0	ID=cds-WP_001160725.1;Parent=gene-C9F00_RS09280;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9F00_RS09280;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	11447	11962	.	+	.	ID=gene-C9F00_RS09285;Name=C9F00_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09285;old_locus_tag=C9F00_09490
NZ_PYKC01000056.1	Protein Homology	CDS	11447	11962	.	+	0	ID=cds-WP_001270724.1;Parent=gene-C9F00_RS09285;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9F00_RS09285;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	12192	12920	.	+	.	ID=gene-C9F00_RS09290;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9F00_RS09290;old_locus_tag=C9F00_09495
NZ_PYKC01000056.1	Protein Homology	CDS	12192	12920	.	+	0	ID=cds-WP_000027186.1;Parent=gene-C9F00_RS09290;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9F00_RS09290;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	12938	13669	.	+	.	ID=gene-C9F00_RS09295;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=C9F00_RS09295;old_locus_tag=C9F00_09500
NZ_PYKC01000056.1	Protein Homology	CDS	12938	13669	.	+	0	ID=cds-WP_000756586.1;Parent=gene-C9F00_RS09295;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9F00_RS09295;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	13676	14392	.	+	.	ID=gene-C9F00_RS09300;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9F00_RS09300;old_locus_tag=C9F00_09505
NZ_PYKC01000056.1	Protein Homology	CDS	13676	14392	.	+	0	ID=cds-WP_001001677.1;Parent=gene-C9F00_RS09300;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9F00_RS09300;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	14392	15060	.	+	.	ID=gene-C9F00_RS09305;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9F00_RS09305;old_locus_tag=C9F00_09510
NZ_PYKC01000056.1	Protein Homology	CDS	14392	15060	.	+	0	ID=cds-WP_000895396.1;Parent=gene-C9F00_RS09305;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9F00_RS09305;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	15297	16028	.	+	.	ID=gene-C9F00_RS09310;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9F00_RS09310;old_locus_tag=C9F00_09515
NZ_PYKC01000056.1	Protein Homology	CDS	15297	16028	.	+	0	ID=cds-WP_000737538.1;Parent=gene-C9F00_RS09310;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9F00_RS09310;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	16247	17734	.	-	.	ID=gene-C9F00_RS09315;Name=C9F00_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09315;old_locus_tag=C9F00_09525
NZ_PYKC01000056.1	Protein Homology	CDS	16247	17734	.	-	0	ID=cds-WP_000644018.1;Parent=gene-C9F00_RS09315;Dbxref=GenBank:WP_000644018.1;Name=WP_000644018.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9F00_RS09315;product=sulfatase;protein_id=WP_000644018.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	17744	18064	.	-	.	ID=gene-C9F00_RS09320;Name=C9F00_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09320;old_locus_tag=C9F00_09530
NZ_PYKC01000056.1	Protein Homology	CDS	17744	18064	.	-	0	ID=cds-WP_000655399.1;Parent=gene-C9F00_RS09320;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9F00_RS09320;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	18094	19437	.	-	.	ID=gene-C9F00_RS09325;Name=C9F00_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09325;old_locus_tag=C9F00_09535
NZ_PYKC01000056.1	Protein Homology	CDS	18094	19437	.	-	0	ID=cds-WP_000399323.1;Parent=gene-C9F00_RS09325;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9F00_RS09325;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	19732	20859	.	-	.	ID=gene-C9F00_RS09330;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9F00_RS09330;old_locus_tag=C9F00_09540
NZ_PYKC01000056.1	Protein Homology	CDS	19732	20859	.	-	0	ID=cds-WP_061376480.1;Parent=gene-C9F00_RS09330;Dbxref=GenBank:WP_061376480.1;Name=WP_061376480.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9F00_RS09330;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_061376480.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	20902	21375	.	-	.	ID=gene-C9F00_RS09335;Name=C9F00_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09335;old_locus_tag=C9F00_09545
NZ_PYKC01000056.1	Protein Homology	CDS	20902	21375	.	-	0	ID=cds-WP_000505788.1;Parent=gene-C9F00_RS09335;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9F00_RS09335;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	21449	22294	.	-	.	ID=gene-C9F00_RS09340;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9F00_RS09340;old_locus_tag=C9F00_09550
NZ_PYKC01000056.1	Protein Homology	CDS	21449	22294	.	-	0	ID=cds-WP_001061629.1;Parent=gene-C9F00_RS09340;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9F00_RS09340;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	22291	23244	.	-	.	ID=gene-C9F00_RS09345;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9F00_RS09345;old_locus_tag=C9F00_09555
NZ_PYKC01000056.1	Protein Homology	CDS	22291	23244	.	-	0	ID=cds-WP_135369346.1;Parent=gene-C9F00_RS09345;Dbxref=GenBank:WP_135369346.1;Name=WP_135369346.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9F00_RS09345;product=putrescine ABC transporter permease PotH;protein_id=WP_135369346.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	23254	24387	.	-	.	ID=gene-C9F00_RS09350;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9F00_RS09350;old_locus_tag=C9F00_09560
NZ_PYKC01000056.1	Protein Homology	CDS	23254	24387	.	-	0	ID=cds-WP_001000698.1;Parent=gene-C9F00_RS09350;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9F00_RS09350;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	24475	25587	.	-	.	ID=gene-C9F00_RS09355;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9F00_RS09355;old_locus_tag=C9F00_09565
NZ_PYKC01000056.1	Protein Homology	CDS	24475	25587	.	-	0	ID=cds-WP_135369351.1;Parent=gene-C9F00_RS09355;Dbxref=GenBank:WP_135369351.1;Name=WP_135369351.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9F00_RS09355;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_135369351.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	25936	26412	.	-	.	ID=gene-C9F00_RS09360;Name=C9F00_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09360;old_locus_tag=C9F00_09570
NZ_PYKC01000056.1	Protein Homology	CDS	25936	26412	.	-	0	ID=cds-WP_001578844.1;Parent=gene-C9F00_RS09360;Dbxref=GenBank:WP_001578844.1;Name=WP_001578844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9F00_RS09360;product=YbjN domain-containing protein;protein_id=WP_001578844.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	26508	27410	.	-	.	ID=gene-C9F00_RS09365;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9F00_RS09365;old_locus_tag=C9F00_09575
NZ_PYKC01000056.1	Protein Homology	CDS	26508	27410	.	-	0	ID=cds-WP_000684361.1;Parent=gene-C9F00_RS09365;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9F00_RS09365;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	27468	28190	.	-	.	ID=gene-C9F00_RS09370;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9F00_RS09370;old_locus_tag=C9F00_09580
NZ_PYKC01000056.1	Protein Homology	CDS	27468	28190	.	-	0	ID=cds-WP_000075300.1;Parent=gene-C9F00_RS09370;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9F00_RS09370;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	28174	28464	.	-	.	ID=gene-C9F00_RS09375;Name=C9F00_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09375;old_locus_tag=C9F00_09585
NZ_PYKC01000056.1	Protein Homology	CDS	28174	28464	.	-	0	ID=cds-WP_001259137.1;Parent=gene-C9F00_RS09375;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9F00_RS09375;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	28634	28897	.	+	.	ID=gene-C9F00_RS09380;Name=C9F00_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09380;old_locus_tag=C9F00_09590
NZ_PYKC01000056.1	Protein Homology	CDS	28634	28897	.	+	0	ID=cds-WP_000495513.1;Parent=gene-C9F00_RS09380;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9F00_RS09380;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	28929	29306	.	-	.	ID=gene-C9F00_RS09385;Name=C9F00_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09385;old_locus_tag=C9F00_09595
NZ_PYKC01000056.1	Protein Homology	CDS	28929	29306	.	-	0	ID=cds-WP_000680850.1;Parent=gene-C9F00_RS09385;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9F00_RS09385;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	29577	31262	.	+	.	ID=gene-C9F00_RS09390;Name=C9F00_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09390;old_locus_tag=C9F00_09605
NZ_PYKC01000056.1	Protein Homology	CDS	29577	31262	.	+	0	ID=cds-WP_001024853.1;Parent=gene-C9F00_RS09390;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9F00_RS09390;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	31379	31999	.	-	.	ID=gene-C9F00_RS09400;Name=C9F00_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09400;old_locus_tag=C9F00_09615
NZ_PYKC01000056.1	Protein Homology	CDS	31379	31999	.	-	0	ID=cds-WP_000661870.1;Parent=gene-C9F00_RS09400;Dbxref=GenBank:WP_000661870.1;Name=WP_000661870.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=C9F00_RS09400;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661870.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	32167	33378	.	+	.	ID=gene-C9F00_RS09405;Name=C9F00_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09405;old_locus_tag=C9F00_09620
NZ_PYKC01000056.1	Protein Homology	CDS	32167	33378	.	+	0	ID=cds-WP_000217420.1;Parent=gene-C9F00_RS09405;Dbxref=GenBank:WP_000217420.1;Name=WP_000217420.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F00_RS09405;product=MFS transporter;protein_id=WP_000217420.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	33375	34190	.	+	.	ID=gene-C9F00_RS09410;Name=C9F00_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09410;old_locus_tag=C9F00_09625
NZ_PYKC01000056.1	Protein Homology	CDS	33375	34190	.	+	0	ID=cds-WP_079841890.1;Parent=gene-C9F00_RS09410;Dbxref=GenBank:WP_079841890.1;Name=WP_079841890.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9F00_RS09410;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_079841890.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	34244	35476	.	-	.	ID=gene-C9F00_RS09415;Name=C9F00_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09415;old_locus_tag=C9F00_09630
NZ_PYKC01000056.1	Protein Homology	CDS	34244	35476	.	-	0	ID=cds-WP_001181284.1;Parent=gene-C9F00_RS09415;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9F00_RS09415;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	35789	36397	.	+	.	ID=gene-C9F00_RS09420;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9F00_RS09420;old_locus_tag=C9F00_09635
NZ_PYKC01000056.1	Protein Homology	CDS	35789	36397	.	+	0	ID=cds-WP_001531378.1;Parent=gene-C9F00_RS09420;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9F00_RS09420;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	36469	37227	.	+	.	ID=gene-C9F00_RS09425;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9F00_RS09425;old_locus_tag=C9F00_09640
NZ_PYKC01000056.1	Protein Homology	CDS	36469	37227	.	+	0	ID=cds-WP_000450106.1;Parent=gene-C9F00_RS09425;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9F00_RS09425;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	37273	38475	.	-	.	ID=gene-C9F00_RS09430;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9F00_RS09430;old_locus_tag=C9F00_09645
NZ_PYKC01000056.1	Protein Homology	CDS	37273	38475	.	-	0	ID=cds-WP_000195712.1;Parent=gene-C9F00_RS09430;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9F00_RS09430;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	38719	39345	.	+	.	ID=gene-C9F00_RS09435;Name=C9F00_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09435;old_locus_tag=C9F00_09650
NZ_PYKC01000056.1	Protein Homology	CDS	38719	39345	.	+	0	ID=cds-WP_000631907.1;Parent=gene-C9F00_RS09435;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9F00_RS09435;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	39342	40463	.	-	.	ID=gene-C9F00_RS09440;Name=C9F00_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09440;old_locus_tag=C9F00_09655
NZ_PYKC01000056.1	Protein Homology	CDS	39342	40463	.	-	0	ID=cds-WP_135369347.1;Parent=gene-C9F00_RS09440;Dbxref=GenBank:WP_135369347.1;Name=WP_135369347.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=C9F00_RS09440;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_135369347.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	40582	40965	.	-	.	ID=gene-C9F00_RS09445;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9F00_RS09445;old_locus_tag=C9F00_09660
NZ_PYKC01000056.1	Protein Homology	CDS	40582	40965	.	-	0	ID=cds-WP_000259648.1;Parent=gene-C9F00_RS09445;Dbxref=GenBank:WP_000259648.1;Name=WP_000259648.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9F00_RS09445;product=biofilm formation regulator BssR;protein_id=WP_000259648.1;transl_table=11
NZ_PYKC01000056.1	RefSeq	gene	41196	42227	.	+	.	ID=gene-C9F00_RS09450;Name=rimO;end_range=42227,.;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9F00_RS09450;old_locus_tag=C9F00_09665;partial=true
NZ_PYKC01000056.1	Protein Homology	CDS	41196	42227	.	+	0	ID=cds-WP_135492261.1;Parent=gene-C9F00_RS09450;Dbxref=GenBank:WP_135492261.1;Name=WP_135492261.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;end_range=42227,.;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9F00_RS09450;partial=true;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_135492261.1;transl_table=11
##sequence-region NZ_PYKC01000126.1 1 109705
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000126.1	RefSeq	region	1	109705	.	+	.	ID=NZ_PYKC01000126.1:1..109705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000126.1	RefSeq	gene	1	197	.	+	.	ID=gene-C9F00_RS18805;Name=C9F00_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18805;old_locus_tag=C9F00_19255;partial=true;start_range=.,1
NZ_PYKC01000126.1	Protein Homology	CDS	1	197	.	+	2	ID=cds-WP_135492448.1;Parent=gene-C9F00_RS18805;Dbxref=GenBank:WP_135492448.1;Name=WP_135492448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9F00_RS18805;partial=true;product=DUF2509 family protein;protein_id=WP_135492448.1;start_range=.,1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	182	502	.	+	.	ID=gene-C9F00_RS18810;Name=C9F00_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18810;old_locus_tag=C9F00_19260
NZ_PYKC01000126.1	Protein Homology	CDS	182	502	.	+	0	ID=cds-WP_000019286.1;Parent=gene-C9F00_RS18810;Dbxref=GenBank:WP_000019286.1;Name=WP_000019286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9F00_RS18810;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019286.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	518	3889	.	+	.	ID=gene-C9F00_RS18815;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9F00_RS18815;old_locus_tag=C9F00_19265
NZ_PYKC01000126.1	Protein Homology	CDS	518	3889	.	+	0	ID=cds-WP_079973488.1;Parent=gene-C9F00_RS18815;Dbxref=GenBank:WP_079973488.1;Name=WP_079973488.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9F00_RS18815;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_079973488.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	4067	6955	.	+	.	ID=gene-C9F00_RS18820;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9F00_RS18820;old_locus_tag=C9F00_19270
NZ_PYKC01000126.1	Protein Homology	CDS	4067	6955	.	+	0	ID=cds-WP_135369238.1;Parent=gene-C9F00_RS18820;Dbxref=GenBank:WP_135369238.1;Name=WP_135369238.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9F00_RS18820;product=pitrilysin;protein_id=WP_135369238.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	6948	10493	.	+	.	ID=gene-C9F00_RS18825;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F00_RS18825;old_locus_tag=C9F00_19275
NZ_PYKC01000126.1	Protein Homology	CDS	6948	10493	.	+	0	ID=cds-WP_001000533.1;Parent=gene-C9F00_RS18825;Dbxref=GenBank:WP_001000533.1;Name=WP_001000533.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9F00_RS18825;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000533.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	10490	12325	.	+	.	ID=gene-C9F00_RS18830;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9F00_RS18830;old_locus_tag=C9F00_19280
NZ_PYKC01000126.1	Protein Homology	CDS	10490	12325	.	+	0	ID=cds-WP_000155134.1;Parent=gene-C9F00_RS18830;Dbxref=GenBank:WP_000155134.1;Name=WP_000155134.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=C9F00_RS18830;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155134.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	12428	13759	.	-	.	ID=gene-C9F00_RS18835;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9F00_RS18835;old_locus_tag=C9F00_19285
NZ_PYKC01000126.1	Protein Homology	CDS	12428	13759	.	-	0	ID=cds-WP_000588964.1;Parent=gene-C9F00_RS18835;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9F00_RS18835;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	13992	15245	.	+	.	ID=gene-C9F00_RS18840;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9F00_RS18840;old_locus_tag=C9F00_19290
NZ_PYKC01000126.1	Protein Homology	CDS	13992	15245	.	+	0	ID=cds-WP_000011919.1;Parent=gene-C9F00_RS18840;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9F00_RS18840;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	15358	15434	.	-	.	ID=gene-C9F00_RS18845;Name=C9F00_RS18845;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS18845;old_locus_tag=C9F00_19295
NZ_PYKC01000126.1	tRNAscan-SE	tRNA	15358	15434	.	-	.	ID=rna-C9F00_RS18845;Parent=gene-C9F00_RS18845;anticodon=(pos:complement(15398..15400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18845;product=tRNA-Met
NZ_PYKC01000126.1	tRNAscan-SE	exon	15358	15434	.	-	.	ID=exon-C9F00_RS18845-1;Parent=rna-C9F00_RS18845;anticodon=(pos:complement(15398..15400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18845;product=tRNA-Met
NZ_PYKC01000126.1	RefSeq	gene	15642	16739	.	+	.	ID=gene-C9F00_RS18850;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9F00_RS18850;old_locus_tag=C9F00_19300
NZ_PYKC01000126.1	Protein Homology	CDS	15642	16739	.	+	0	ID=cds-WP_000678626.1;Parent=gene-C9F00_RS18850;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9F00_RS18850;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	16849	17655	.	+	.	ID=gene-C9F00_RS18855;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9F00_RS18855;old_locus_tag=C9F00_19305
NZ_PYKC01000126.1	Protein Homology	CDS	16849	17655	.	+	0	ID=cds-WP_000117748.1;Parent=gene-C9F00_RS18855;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9F00_RS18855;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	17707	18594	.	-	.	ID=gene-C9F00_RS18860;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F00_RS18860;old_locus_tag=C9F00_19310
NZ_PYKC01000126.1	Protein Homology	CDS	17707	18594	.	-	0	ID=cds-WP_135369239.1;Parent=gene-C9F00_RS18860;Dbxref=GenBank:WP_135369239.1;Name=WP_135369239.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9F00_RS18860;product=EamA family transporter RarD;protein_id=WP_135369239.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	18894	19337	.	-	.	ID=gene-C9F00_RS18865;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9F00_RS18865;old_locus_tag=C9F00_19315
NZ_PYKC01000126.1	Protein Homology	CDS	18894	19337	.	-	0	ID=cds-WP_000184198.1;Parent=gene-C9F00_RS18865;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=C9F00_RS18865;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	19337	20542	.	-	.	ID=gene-C9F00_RS18870;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9F00_RS18870;old_locus_tag=C9F00_19320
NZ_PYKC01000126.1	Protein Homology	CDS	19337	20542	.	-	0	ID=cds-WP_135492450.1;Parent=gene-C9F00_RS18870;Dbxref=GenBank:WP_135492450.1;Name=WP_135492450.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9F00_RS18870;product=cysteine desulfurase CsdA;protein_id=WP_135492450.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	20735	20962	.	+	.	ID=gene-C9F00_RS18875;Name=C9F00_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18875;old_locus_tag=C9F00_19325
NZ_PYKC01000126.1	Protein Homology	CDS	20735	20962	.	+	0	ID=cds-WP_000750393.1;Parent=gene-C9F00_RS18875;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9F00_RS18875;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	21309	22226	.	+	.	ID=gene-C9F00_RS18880;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9F00_RS18880;old_locus_tag=C9F00_19330
NZ_PYKC01000126.1	Protein Homology	CDS	21309	22226	.	+	0	ID=cds-WP_000044409.1;Parent=gene-C9F00_RS18880;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9F00_RS18880;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	22245	22640	.	+	.	ID=gene-C9F00_RS18885;Name=C9F00_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18885;old_locus_tag=C9F00_19335
NZ_PYKC01000126.1	Protein Homology	CDS	22245	22640	.	+	0	ID=cds-WP_000203913.1;Parent=gene-C9F00_RS18885;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9F00_RS18885;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	22633	23733	.	+	.	ID=gene-C9F00_RS18890;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9F00_RS18890;old_locus_tag=C9F00_19340
NZ_PYKC01000126.1	Protein Homology	CDS	22633	23733	.	+	0	ID=cds-WP_001045497.1;Parent=gene-C9F00_RS18890;Dbxref=GenBank:WP_001045497.1;Name=WP_001045497.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9F00_RS18890;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045497.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	23792	24502	.	-	.	ID=gene-C9F00_RS18895;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9F00_RS18895;old_locus_tag=C9F00_19345
NZ_PYKC01000126.1	Protein Homology	CDS	23792	24502	.	-	0	ID=cds-WP_000642330.1;Parent=gene-C9F00_RS18895;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9F00_RS18895;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	24560	24982	.	-	.	ID=gene-C9F00_RS18900;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9F00_RS18900;old_locus_tag=C9F00_19350
NZ_PYKC01000126.1	Protein Homology	CDS	24560	24982	.	-	0	ID=cds-WP_000920848.1;Parent=gene-C9F00_RS18900;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9F00_RS18900;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	24984	26402	.	-	.	ID=gene-C9F00_RS18905;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9F00_RS18905;old_locus_tag=C9F00_19355
NZ_PYKC01000126.1	Protein Homology	CDS	24984	26402	.	-	0	ID=cds-WP_000806780.1;Parent=gene-C9F00_RS18905;Dbxref=GenBank:WP_000806780.1;Name=WP_000806780.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9F00_RS18905;product=L-fuculokinase;protein_id=WP_000806780.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	26503	28278	.	-	.	ID=gene-C9F00_RS18910;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9F00_RS18910;old_locus_tag=C9F00_19360
NZ_PYKC01000126.1	Protein Homology	CDS	26503	28278	.	-	0	ID=cds-WP_000724126.1;Parent=gene-C9F00_RS18910;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9F00_RS18910;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	28310	29626	.	-	.	ID=gene-C9F00_RS18915;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F00_RS18915;old_locus_tag=C9F00_19365
NZ_PYKC01000126.1	Protein Homology	CDS	28310	29626	.	-	0	ID=cds-WP_000528625.1;Parent=gene-C9F00_RS18915;Dbxref=GenBank:WP_000528625.1;Name=WP_000528625.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9F00_RS18915;product=L-fucose:H+ symporter permease;protein_id=WP_000528625.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	30182	30829	.	+	.	ID=gene-C9F00_RS18920;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9F00_RS18920;old_locus_tag=C9F00_19370
NZ_PYKC01000126.1	Protein Homology	CDS	30182	30829	.	+	0	ID=cds-WP_000440819.1;Parent=gene-C9F00_RS18920;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9F00_RS18920;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	30846	31994	.	+	.	ID=gene-C9F00_RS18925;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9F00_RS18925;old_locus_tag=C9F00_19375
NZ_PYKC01000126.1	Protein Homology	CDS	30846	31994	.	+	0	ID=cds-WP_000013565.1;Parent=gene-C9F00_RS18925;Dbxref=GenBank:WP_000013565.1;Name=WP_000013565.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9F00_RS18925;product=lactaldehyde reductase;protein_id=WP_000013565.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	32086	32841	.	-	.	ID=gene-C9F00_RS18930;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9F00_RS18930;old_locus_tag=C9F00_19380
NZ_PYKC01000126.1	Protein Homology	CDS	32086	32841	.	-	0	ID=cds-WP_167850430.1;Parent=gene-C9F00_RS18930;Dbxref=GenBank:WP_167850430.1;Name=WP_167850430.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9F00_RS18930;product=flap endonuclease Xni;protein_id=WP_167850430.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	33012	34379	.	-	.	ID=gene-C9F00_RS18940;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=C9F00_RS18940;old_locus_tag=C9F00_19390
NZ_PYKC01000126.1	Protein Homology	CDS	33012	34379	.	-	0	ID=cds-WP_000626384.1;Parent=gene-C9F00_RS18940;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9F00_RS18940;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	34438	35727	.	-	.	ID=gene-C9F00_RS18945;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9F00_RS18945;old_locus_tag=C9F00_19395
NZ_PYKC01000126.1	Protein Homology	CDS	34438	35727	.	-	0	ID=cds-WP_000450462.1;Parent=gene-C9F00_RS18945;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9F00_RS18945;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	36292	37656	.	-	.	ID=gene-C9F00_RS18950;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9F00_RS18950;old_locus_tag=C9F00_19400
NZ_PYKC01000126.1	Protein Homology	CDS	36292	37656	.	-	0	ID=cds-WP_000627973.1;Parent=gene-C9F00_RS18950;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9F00_RS18950;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	37769	38617	.	-	.	ID=gene-C9F00_RS18955;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9F00_RS18955;old_locus_tag=C9F00_19405
NZ_PYKC01000126.1	Protein Homology	CDS	37769	38617	.	-	0	ID=cds-WP_115408978.1;Parent=gene-C9F00_RS18955;Dbxref=GenBank:WP_115408978.1;Name=WP_115408978.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9F00_RS18955;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_115408978.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	38686	39231	.	+	.	ID=gene-C9F00_RS18960;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9F00_RS18960;old_locus_tag=C9F00_19410
NZ_PYKC01000126.1	Protein Homology	CDS	38686	39231	.	+	0	ID=cds-WP_000343990.1;Parent=gene-C9F00_RS18960;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9F00_RS18960;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	39843	40172	.	+	.	ID=gene-C9F00_RS18970;Name=C9F00_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18970;old_locus_tag=C9F00_19420
NZ_PYKC01000126.1	Protein Homology	CDS	39843	40172	.	+	0	ID=cds-WP_001804977.1;Parent=gene-C9F00_RS18970;Dbxref=GenBank:WP_001804977.1;Name=WP_001804977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9F00_RS18970;product=YqcC family protein;protein_id=WP_001804977.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	40172	40954	.	+	.	ID=gene-C9F00_RS18975;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9F00_RS18975;old_locus_tag=C9F00_19425
NZ_PYKC01000126.1	Protein Homology	CDS	40172	40954	.	+	0	ID=cds-WP_000890030.1;Parent=gene-C9F00_RS18975;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9F00_RS18975;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	40973	41422	.	+	.	ID=gene-C9F00_RS18980;Name=C9F00_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18980;old_locus_tag=C9F00_19430
NZ_PYKC01000126.1	Protein Homology	CDS	40973	41422	.	+	0	ID=cds-WP_000807731.1;Parent=gene-C9F00_RS18980;Dbxref=GenBank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9F00_RS18980;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	41572	41820	.	-	.	ID=gene-C9F00_RS18985;Name=C9F00_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18985;old_locus_tag=C9F00_19435
NZ_PYKC01000126.1	GeneMarkS-2+	CDS	41572	41820	.	-	0	ID=cds-WP_001531815.1;Parent=gene-C9F00_RS18985;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS18985;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	41903	43261	.	+	.	ID=gene-C9F00_RS18990;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9F00_RS18990;old_locus_tag=C9F00_19440
NZ_PYKC01000126.1	Protein Homology	CDS	41903	43261	.	+	0	ID=cds-WP_000097015.1;Parent=gene-C9F00_RS18990;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9F00_RS18990;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	43258	44598	.	+	.	ID=gene-C9F00_RS18995;Name=C9F00_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18995;old_locus_tag=C9F00_19445
NZ_PYKC01000126.1	Protein Homology	CDS	43258	44598	.	+	0	ID=cds-WP_135369242.1;Parent=gene-C9F00_RS18995;Dbxref=GenBank:WP_135369242.1;Name=WP_135369242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9F00_RS18995;product=enolase C-terminal domain-like protein;protein_id=WP_135369242.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	44619	45959	.	+	.	ID=gene-C9F00_RS19000;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9F00_RS19000;old_locus_tag=C9F00_19450
NZ_PYKC01000126.1	Protein Homology	CDS	44619	45959	.	+	0	ID=cds-WP_000107113.1;Parent=gene-C9F00_RS19000;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9F00_RS19000;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	46037	47179	.	+	.	ID=gene-C9F00_RS19005;Name=C9F00_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19005;old_locus_tag=C9F00_19455
NZ_PYKC01000126.1	Protein Homology	CDS	46037	47179	.	+	0	ID=cds-WP_000706479.1;Parent=gene-C9F00_RS19005;Dbxref=GenBank:WP_000706479.1;Name=WP_000706479.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9F00_RS19005;product=glycerate kinase;protein_id=WP_000706479.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	47223	49979	.	-	.	ID=gene-C9F00_RS19010;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9F00_RS19010;old_locus_tag=C9F00_19460
NZ_PYKC01000126.1	Protein Homology	CDS	47223	49979	.	-	0	ID=cds-WP_000186397.1;Parent=gene-C9F00_RS19010;Dbxref=GenBank:WP_000186397.1;Name=WP_000186397.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9F00_RS19010;product=two-component sensor histidine kinase BarA;protein_id=WP_000186397.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	50037	51332	.	+	.	ID=gene-C9F00_RS19015;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9F00_RS19015;old_locus_tag=C9F00_19465
NZ_PYKC01000126.1	Protein Homology	CDS	50037	51332	.	+	0	ID=cds-WP_000046856.1;Parent=gene-C9F00_RS19015;Dbxref=GenBank:WP_000046856.1;Name=WP_000046856.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9F00_RS19015;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046856.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	51384	53618	.	+	.	ID=gene-C9F00_RS19020;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9F00_RS19020;old_locus_tag=C9F00_19470
NZ_PYKC01000126.1	Protein Homology	CDS	51384	53618	.	+	0	ID=cds-WP_000226841.1;Parent=gene-C9F00_RS19020;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9F00_RS19020;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	53703	54059	.	+	.	ID=gene-C9F00_RS19025;Name=C9F00_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19025;old_locus_tag=C9F00_19475
NZ_PYKC01000126.1	Protein Homology	CDS	53703	54059	.	+	0	ID=cds-WP_077942301.1;Parent=gene-C9F00_RS19025;Dbxref=GenBank:WP_077942301.1;Name=WP_077942301.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9F00_RS19025;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_077942301.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	pseudogene	54025	54144	.	+	.	ID=gene-C9F00_RS19030;Name=C9F00_RS19030;end_range=54144,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19030;old_locus_tag=C9F00_19480;partial=true;pseudo=true
NZ_PYKC01000126.1	Protein Homology	CDS	54025	54144	.	+	0	ID=cds-C9F00_RS19030;Parent=gene-C9F00_RS19030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0090729,GO:0110001;end_range=54144,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9F00_RS19030;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	54264	55313	.	-	.	ID=gene-C9F00_RS19035;Name=C9F00_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19035;old_locus_tag=C9F00_19485
NZ_PYKC01000126.1	Protein Homology	CDS	54264	55313	.	-	0	ID=cds-WP_240776467.1;Parent=gene-C9F00_RS19035;Dbxref=GenBank:WP_240776467.1;Name=WP_240776467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662924.1;locus_tag=C9F00_RS19035;product=hypothetical protein;protein_id=WP_240776467.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	55325	56410	.	-	.	ID=gene-C9F00_RS19040;Name=C9F00_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19040;old_locus_tag=C9F00_19490
NZ_PYKC01000126.1	Protein Homology	CDS	55325	56410	.	-	0	ID=cds-WP_135369243.1;Parent=gene-C9F00_RS19040;Dbxref=GenBank:WP_135369243.1;Name=WP_135369243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=C9F00_RS19040;product=hypothetical protein;protein_id=WP_135369243.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	56439	56975	.	-	.	ID=gene-C9F00_RS19045;Name=C9F00_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19045;old_locus_tag=C9F00_19495
NZ_PYKC01000126.1	Protein Homology	CDS	56439	56975	.	-	0	ID=cds-WP_020899169.1;Parent=gene-C9F00_RS19045;Dbxref=GenBank:WP_020899169.1;Name=WP_020899169.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=C9F00_RS19045;product=fimbrial protein;protein_id=WP_020899169.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	56972	57442	.	-	.	ID=gene-C9F00_RS19050;Name=C9F00_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19050;old_locus_tag=C9F00_19500
NZ_PYKC01000126.1	Protein Homology	CDS	56972	57442	.	-	0	ID=cds-WP_135369244.1;Parent=gene-C9F00_RS19050;Dbxref=GenBank:WP_135369244.1;Name=WP_135369244.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=C9F00_RS19050;product=fimbrial protein;protein_id=WP_135369244.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	57457	57963	.	-	.	ID=gene-C9F00_RS19055;Name=C9F00_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19055;old_locus_tag=C9F00_19505
NZ_PYKC01000126.1	Protein Homology	CDS	57457	57963	.	-	0	ID=cds-WP_000178259.1;Parent=gene-C9F00_RS19055;Dbxref=GenBank:WP_000178259.1;Name=WP_000178259.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=C9F00_RS19055;product=fimbrial protein;protein_id=WP_000178259.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	57983	58756	.	-	.	ID=gene-C9F00_RS19060;Name=C9F00_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19060;old_locus_tag=C9F00_19510
NZ_PYKC01000126.1	Protein Homology	CDS	57983	58756	.	-	0	ID=cds-WP_001044459.1;Parent=gene-C9F00_RS19060;Dbxref=GenBank:WP_001044459.1;Name=WP_001044459.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=C9F00_RS19060;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044459.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	58769	61465	.	-	.	ID=gene-C9F00_RS19065;Name=C9F00_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19065;old_locus_tag=C9F00_19515
NZ_PYKC01000126.1	Protein Homology	CDS	58769	61465	.	-	0	ID=cds-WP_280954498.1;Parent=gene-C9F00_RS19065;Dbxref=GenBank:WP_280954498.1;Name=WP_280954498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=C9F00_RS19065;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_280954498.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	61548	62135	.	-	.	ID=gene-C9F00_RS19070;Name=C9F00_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19070;old_locus_tag=C9F00_19520
NZ_PYKC01000126.1	Protein Homology	CDS	61548	62135	.	-	0	ID=cds-WP_000842512.1;Parent=gene-C9F00_RS19070;Dbxref=GenBank:WP_000842512.1;Name=WP_000842512.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9F00_RS19070;product=fimbrial protein;protein_id=WP_000842512.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	62742	63542	.	+	.	ID=gene-C9F00_RS19075;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9F00_RS19075;old_locus_tag=C9F00_19525
NZ_PYKC01000126.1	Protein Homology	CDS	62742	63542	.	+	0	ID=cds-WP_000210454.1;Parent=gene-C9F00_RS19075;Dbxref=GenBank:WP_000210454.1;Name=WP_000210454.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9F00_RS19075;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210454.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	63770	65407	.	+	.	ID=gene-C9F00_RS19080;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9F00_RS19080;old_locus_tag=C9F00_19530
NZ_PYKC01000126.1	Protein Homology	CDS	63770	65407	.	+	0	ID=cds-WP_000210863.1;Parent=gene-C9F00_RS19080;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F00_RS19080;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	65490	66788	.	+	.	ID=gene-C9F00_RS19085;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9F00_RS19085;old_locus_tag=C9F00_19535
NZ_PYKC01000126.1	Protein Homology	CDS	65490	66788	.	+	0	ID=cds-WP_000036734.1;Parent=gene-C9F00_RS19085;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9F00_RS19085;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	66924	67595	.	+	.	ID=gene-C9F00_RS19090;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9F00_RS19090;old_locus_tag=C9F00_19540
NZ_PYKC01000126.1	Protein Homology	CDS	66924	67595	.	+	0	ID=cds-WP_001199961.1;Parent=gene-C9F00_RS19090;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9F00_RS19090;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	direct_repeat	67892	68530	.	+	.	ID=id-NZ_PYKC01000126.1:67892..68530;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=67892..67920;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_PYKC01000126.1	RefSeq	gene	68689	69486	.	+	.	ID=gene-C9F00_RS19095;Name=C9F00_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19095;old_locus_tag=C9F00_19545
NZ_PYKC01000126.1	Protein Homology	CDS	68689	69486	.	+	0	ID=cds-WP_135369069.1;Parent=gene-C9F00_RS19095;Dbxref=GenBank:WP_135369069.1;Name=WP_135369069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9F00_RS19095;product=MBL fold metallo-hydrolase;protein_id=WP_135369069.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	69573	69935	.	-	.	ID=gene-C9F00_RS19100;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9F00_RS19100;old_locus_tag=C9F00_19550
NZ_PYKC01000126.1	Protein Homology	CDS	69573	69935	.	-	0	ID=cds-WP_000108313.1;Parent=gene-C9F00_RS19100;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9F00_RS19100;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	70359	72158	.	+	.	ID=gene-C9F00_RS19110;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F00_RS19110;old_locus_tag=C9F00_19560
NZ_PYKC01000126.1	Protein Homology	CDS	70359	72158	.	+	0	ID=cds-WP_077463812.1;Parent=gene-C9F00_RS19110;Dbxref=GenBank:WP_077463812.1;Name=WP_077463812.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9F00_RS19110;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_077463812.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	72158	73870	.	+	.	ID=gene-C9F00_RS19115;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9F00_RS19115;old_locus_tag=C9F00_19565
NZ_PYKC01000126.1	Protein Homology	CDS	72158	73870	.	+	0	ID=cds-WP_135369068.1;Parent=gene-C9F00_RS19115;Dbxref=GenBank:WP_135369068.1;Name=WP_135369068.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9F00_RS19115;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_135369068.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	73972	74706	.	+	.	ID=gene-C9F00_RS19120;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9F00_RS19120;old_locus_tag=C9F00_19570
NZ_PYKC01000126.1	Protein Homology	CDS	73972	74706	.	+	0	ID=cds-WP_023201015.1;Parent=gene-C9F00_RS19120;Dbxref=GenBank:WP_023201015.1;Name=WP_023201015.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9F00_RS19120;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023201015.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	74919	75872	.	-	.	ID=gene-C9F00_RS19125;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9F00_RS19125;old_locus_tag=C9F00_19580
NZ_PYKC01000126.1	Protein Homology	CDS	74919	75872	.	-	0	ID=cds-WP_001145544.1;Parent=gene-C9F00_RS19125;Dbxref=GenBank:WP_001145544.1;Name=WP_001145544.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9F00_RS19125;product=SPI-1 type III secretion system effector SopD;protein_id=WP_001145544.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	76256	78955	.	-	.	ID=gene-C9F00_RS19130;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=C9F00_RS19130;old_locus_tag=C9F00_19585
NZ_PYKC01000126.1	Protein Homology	CDS	76256	78955	.	-	0	ID=cds-WP_135369067.1;Parent=gene-C9F00_RS19130;Dbxref=GenBank:WP_135369067.1;Name=WP_135369067.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=C9F00_RS19130;product=CRISPR-associated helicase Cas3';protein_id=WP_135369067.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	79313	80848	.	+	.	ID=gene-C9F00_RS19135;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=C9F00_RS19135;old_locus_tag=C9F00_19590
NZ_PYKC01000126.1	Protein Homology	CDS	79313	80848	.	+	0	ID=cds-WP_135369066.1;Parent=gene-C9F00_RS19135;Dbxref=GenBank:WP_135369066.1;Name=WP_135369066.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=C9F00_RS19135;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_135369066.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	80865	81467	.	+	.	ID=gene-C9F00_RS19140;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=C9F00_RS19140;old_locus_tag=C9F00_19595
NZ_PYKC01000126.1	Protein Homology	CDS	80865	81467	.	+	0	ID=cds-WP_023224615.1;Parent=gene-C9F00_RS19140;Dbxref=GenBank:WP_023224615.1;Name=WP_023224615.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=C9F00_RS19140;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_023224615.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	81490	82548	.	+	.	ID=gene-C9F00_RS19145;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9F00_RS19145;old_locus_tag=C9F00_19600
NZ_PYKC01000126.1	Protein Homology	CDS	81490	82548	.	+	0	ID=cds-WP_001537534.1;Parent=gene-C9F00_RS19145;Dbxref=GenBank:WP_001537534.1;Name=WP_001537534.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=C9F00_RS19145;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001537534.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	82558	83283	.	+	.	ID=gene-C9F00_RS19150;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9F00_RS19150;old_locus_tag=C9F00_19605
NZ_PYKC01000126.1	Protein Homology	CDS	82558	83283	.	+	0	ID=cds-WP_135369065.1;Parent=gene-C9F00_RS19150;Dbxref=GenBank:WP_135369065.1;Name=WP_135369065.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=C9F00_RS19150;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_135369065.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	83283	83987	.	+	.	ID=gene-C9F00_RS19155;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9F00_RS19155;old_locus_tag=C9F00_19610
NZ_PYKC01000126.1	Protein Homology	CDS	83283	83987	.	+	0	ID=cds-WP_001748704.1;Parent=gene-C9F00_RS19155;Dbxref=GenBank:WP_001748704.1;Name=WP_001748704.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=C9F00_RS19155;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_001748704.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	83987	84904	.	+	.	ID=gene-C9F00_RS19160;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9F00_RS19160;old_locus_tag=C9F00_19615
NZ_PYKC01000126.1	Protein Homology	CDS	83987	84904	.	+	0	ID=cds-WP_000118674.1;Parent=gene-C9F00_RS19160;Dbxref=GenBank:WP_000118674.1;Name=WP_000118674.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=C9F00_RS19160;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000118674.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	84907	85200	.	+	.	ID=gene-C9F00_RS19165;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9F00_RS19165;old_locus_tag=C9F00_19620
NZ_PYKC01000126.1	Protein Homology	CDS	84907	85200	.	+	0	ID=cds-WP_080201091.1;Parent=gene-C9F00_RS19165;Dbxref=GenBank:WP_080201091.1;Name=WP_080201091.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=C9F00_RS19165;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_080201091.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	direct_repeat	85285	86168	.	+	.	ID=id-NZ_PYKC01000126.1:85285..86168;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=85285..85313;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_PYKC01000126.1	RefSeq	gene	86183	87229	.	-	.	ID=gene-C9F00_RS19170;Name=C9F00_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19170;old_locus_tag=C9F00_19625
NZ_PYKC01000126.1	Protein Homology	CDS	86183	87229	.	-	0	ID=cds-WP_000490481.1;Parent=gene-C9F00_RS19170;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9F00_RS19170;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	87480	88388	.	+	.	ID=gene-C9F00_RS19175;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9F00_RS19175;old_locus_tag=C9F00_19630
NZ_PYKC01000126.1	Protein Homology	CDS	87480	88388	.	+	0	ID=cds-WP_000372384.1;Parent=gene-C9F00_RS19175;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9F00_RS19175;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	88398	89837	.	+	.	ID=gene-C9F00_RS19180;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9F00_RS19180;old_locus_tag=C9F00_19635
NZ_PYKC01000126.1	Protein Homology	CDS	88398	89837	.	+	0	ID=cds-WP_001092256.1;Parent=gene-C9F00_RS19180;Dbxref=GenBank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9F00_RS19180;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	89824	90429	.	+	.	ID=gene-C9F00_RS19185;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9F00_RS19185;old_locus_tag=C9F00_19640
NZ_PYKC01000126.1	Protein Homology	CDS	89824	90429	.	+	0	ID=cds-WP_001173663.1;Parent=gene-C9F00_RS19185;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9F00_RS19185;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	90480	90803	.	+	.	ID=gene-C9F00_RS19190;Name=C9F00_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19190;old_locus_tag=C9F00_19645
NZ_PYKC01000126.1	Protein Homology	CDS	90480	90803	.	+	0	ID=cds-WP_001537530.1;Parent=gene-C9F00_RS19190;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=C9F00_RS19190;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	90994	91305	.	+	.	ID=gene-C9F00_RS19195;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9F00_RS19195;old_locus_tag=C9F00_19650
NZ_PYKC01000126.1	Protein Homology	CDS	90994	91305	.	+	0	ID=cds-WP_000517480.1;Parent=gene-C9F00_RS19195;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9F00_RS19195;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	91324	92034	.	+	.	ID=gene-C9F00_RS19200;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9F00_RS19200;old_locus_tag=C9F00_19655
NZ_PYKC01000126.1	Protein Homology	CDS	91324	92034	.	+	0	ID=cds-WP_000741641.1;Parent=gene-C9F00_RS19200;Dbxref=GenBank:WP_000741641.1;Name=WP_000741641.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9F00_RS19200;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741641.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	92034	92513	.	+	.	ID=gene-C9F00_RS19205;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9F00_RS19205;old_locus_tag=C9F00_19660
NZ_PYKC01000126.1	Protein Homology	CDS	92034	92513	.	+	0	ID=cds-WP_001219244.1;Parent=gene-C9F00_RS19205;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9F00_RS19205;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	92510	93559	.	+	.	ID=gene-C9F00_RS19210;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9F00_RS19210;old_locus_tag=C9F00_19665
NZ_PYKC01000126.1	Protein Homology	CDS	92510	93559	.	+	0	ID=cds-WP_000134246.1;Parent=gene-C9F00_RS19210;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9F00_RS19210;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	93540	94301	.	+	.	ID=gene-C9F00_RS19215;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9F00_RS19215;old_locus_tag=C9F00_19670
NZ_PYKC01000126.1	Protein Homology	CDS	93540	94301	.	+	0	ID=cds-WP_001221538.1;Parent=gene-C9F00_RS19215;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9F00_RS19215;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	94295	94921	.	+	.	ID=gene-C9F00_RS19220;Name=C9F00_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19220;old_locus_tag=C9F00_19675
NZ_PYKC01000126.1	Protein Homology	CDS	94295	94921	.	+	0	ID=cds-WP_000253545.1;Parent=gene-C9F00_RS19220;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F00_RS19220;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	95060	95218	.	-	.	ID=gene-C9F00_RS24550;Name=C9F00_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24550
NZ_PYKC01000126.1	Protein Homology	CDS	95060	95218	.	-	0	ID=cds-WP_223148970.1;Parent=gene-C9F00_RS24550;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9F00_RS24550;product=peptidase;protein_id=WP_223148970.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	95148	96230	.	+	.	ID=gene-C9F00_RS19225;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9F00_RS19225;old_locus_tag=C9F00_19680
NZ_PYKC01000126.1	Protein Homology	CDS	95148	96230	.	+	0	ID=cds-WP_223149274.1;Parent=gene-C9F00_RS19225;Dbxref=GenBank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9F00_RS19225;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	96293	97285	.	+	.	ID=gene-C9F00_RS19230;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9F00_RS19230;old_locus_tag=C9F00_19685
NZ_PYKC01000126.1	Protein Homology	CDS	96293	97285	.	+	0	ID=cds-WP_000081498.1;Parent=gene-C9F00_RS19230;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9F00_RS19230;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	97330	97566	.	-	.	ID=gene-C9F00_RS19235;Name=C9F00_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19235;old_locus_tag=C9F00_19690
NZ_PYKC01000126.1	Protein Homology	CDS	97330	97566	.	-	0	ID=cds-WP_000562964.1;Parent=gene-C9F00_RS19235;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9F00_RS19235;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	97577	99004	.	-	.	ID=gene-C9F00_RS19240;Name=C9F00_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19240;old_locus_tag=C9F00_19695
NZ_PYKC01000126.1	Protein Homology	CDS	97577	99004	.	-	0	ID=cds-WP_000863168.1;Parent=gene-C9F00_RS19240;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9F00_RS19240;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	99004	99597	.	-	.	ID=gene-C9F00_RS19245;Name=C9F00_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19245;old_locus_tag=C9F00_19700
NZ_PYKC01000126.1	Protein Homology	CDS	99004	99597	.	-	0	ID=cds-WP_001237180.1;Parent=gene-C9F00_RS19245;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9F00_RS19245;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	99768	100172	.	+	.	ID=gene-C9F00_RS19250;Name=C9F00_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19250;old_locus_tag=C9F00_19705
NZ_PYKC01000126.1	Protein Homology	CDS	99768	100172	.	+	0	ID=cds-WP_000423338.1;Parent=gene-C9F00_RS19250;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9F00_RS19250;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	100191	100955	.	-	.	ID=gene-C9F00_RS19255;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9F00_RS19255;old_locus_tag=C9F00_19710
NZ_PYKC01000126.1	Protein Homology	CDS	100191	100955	.	-	0	ID=cds-WP_000613184.1;Parent=gene-C9F00_RS19255;Dbxref=GenBank:WP_000613184.1;Name=WP_000613184.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9F00_RS19255;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613184.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	101152	102075	.	+	.	ID=gene-C9F00_RS19260;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=C9F00_RS19260;old_locus_tag=C9F00_19715
NZ_PYKC01000126.1	Protein Homology	CDS	101152	102075	.	+	0	ID=cds-WP_000206958.1;Parent=gene-C9F00_RS19260;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9F00_RS19260;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	102069	103331	.	+	.	ID=gene-C9F00_RS19265;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=C9F00_RS19265;old_locus_tag=C9F00_19720
NZ_PYKC01000126.1	Protein Homology	CDS	102069	103331	.	+	0	ID=cds-WP_000912492.1;Parent=gene-C9F00_RS19265;Dbxref=GenBank:WP_000912492.1;Name=WP_000912492.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9F00_RS19265;product=3-oxo-tetronate kinase;protein_id=WP_000912492.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	103328	103966	.	+	.	ID=gene-C9F00_RS19270;Name=C9F00_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19270;old_locus_tag=C9F00_19725
NZ_PYKC01000126.1	Protein Homology	CDS	103328	103966	.	+	0	ID=cds-WP_000153636.1;Parent=gene-C9F00_RS19270;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9F00_RS19270;product=aldolase;protein_id=WP_000153636.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	103971	104747	.	+	.	ID=gene-C9F00_RS19275;Name=C9F00_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19275;old_locus_tag=C9F00_19730
NZ_PYKC01000126.1	Protein Homology	CDS	103971	104747	.	+	0	ID=cds-WP_001136891.1;Parent=gene-C9F00_RS19275;Dbxref=GenBank:WP_001136891.1;Name=WP_001136891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9F00_RS19275;product=HPr family phosphocarrier protein;protein_id=WP_001136891.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	104787	105737	.	+	.	ID=gene-C9F00_RS19280;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=C9F00_RS19280;old_locus_tag=C9F00_19735
NZ_PYKC01000126.1	Protein Homology	CDS	104787	105737	.	+	0	ID=cds-WP_001165731.1;Parent=gene-C9F00_RS19280;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9F00_RS19280;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	105734	107230	.	+	.	ID=gene-C9F00_RS19285;Name=C9F00_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19285;old_locus_tag=C9F00_19740
NZ_PYKC01000126.1	Protein Homology	CDS	105734	107230	.	+	0	ID=cds-WP_000202725.1;Parent=gene-C9F00_RS19285;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9F00_RS19285;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	107272	108204	.	-	.	ID=gene-C9F00_RS19290;Name=C9F00_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19290;old_locus_tag=C9F00_19745
NZ_PYKC01000126.1	Protein Homology	CDS	107272	108204	.	-	0	ID=cds-WP_135369064.1;Parent=gene-C9F00_RS19290;Dbxref=GenBank:WP_135369064.1;Name=WP_135369064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9F00_RS19290;product=LysR family transcriptional regulator;protein_id=WP_135369064.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	gene	108292	109500	.	+	.	ID=gene-C9F00_RS19295;Name=C9F00_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19295;old_locus_tag=C9F00_19750
NZ_PYKC01000126.1	Protein Homology	CDS	108292	109500	.	+	0	ID=cds-WP_135369063.1;Parent=gene-C9F00_RS19295;Dbxref=GenBank:WP_135369063.1;Name=WP_135369063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=C9F00_RS19295;product=MFS transporter;protein_id=WP_135369063.1;transl_table=11
NZ_PYKC01000126.1	RefSeq	pseudogene	109497	109640	.	+	.	ID=gene-C9F00_RS19300;Name=C9F00_RS19300;end_range=109640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19300;old_locus_tag=C9F00_19755;partial=true;pseudo=true
NZ_PYKC01000126.1	Protein Homology	CDS	109497	109640	.	+	0	ID=cds-C9F00_RS19300;Parent=gene-C9F00_RS19300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=109640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F00_RS19300;partial=true;product=DUF4440 domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000159.1 1 563
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000159.1	RefSeq	region	1	563	.	+	.	ID=NZ_PYKC01000159.1:1..563;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000159.1	RefSeq	gene	1	454	.	-	.	ID=gene-C9F00_RS24910;Name=C9F00_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24910;partial=true;start_range=.,1
NZ_PYKC01000159.1	Protein Homology	CDS	1	454	.	-	0	ID=cds-WP_432430823.1;Parent=gene-C9F00_RS24910;Dbxref=GenBank:WP_432430823.1;Name=WP_432430823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.6;locus_tag=C9F00_RS24910;partial=true;product=hypothetical protein;protein_id=WP_432430823.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000002.1 1 42025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000002.1	RefSeq	region	1	42025	.	+	.	ID=NZ_PYKC01000002.1:1..42025;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000002.1	RefSeq	pseudogene	1	303	.	+	.	ID=gene-C9F00_RS00270;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=pseudogene;locus_tag=C9F00_RS00270;old_locus_tag=C9F00_00280;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000002.1	Protein Homology	CDS	1	303	.	+	0	ID=cds-C9F00_RS00270;Parent=gene-C9F00_RS00270;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9F00_RS00270;partial=true;product=NrfD/PsrC family molybdoenzyme membrane anchor subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	296	2518	.	+	.	ID=gene-C9F00_RS00275;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=C9F00_RS00275;old_locus_tag=C9F00_00285
NZ_PYKC01000002.1	Protein Homology	CDS	296	2518	.	+	0	ID=cds-WP_135369151.1;Parent=gene-C9F00_RS00275;Dbxref=GenBank:WP_135369151.1;Name=WP_135369151.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F00_RS00275;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_135369151.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	2515	3135	.	+	.	ID=gene-C9F00_RS00280;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9F00_RS00280;old_locus_tag=C9F00_00290
NZ_PYKC01000002.1	Protein Homology	CDS	2515	3135	.	+	0	ID=cds-WP_023260312.1;Parent=gene-C9F00_RS00280;Dbxref=GenBank:WP_023260312.1;Name=WP_023260312.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9F00_RS00280;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_023260312.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	3480	4790	.	+	.	ID=gene-C9F00_RS00285;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9F00_RS00285;old_locus_tag=C9F00_00295
NZ_PYKC01000002.1	Protein Homology	CDS	3480	4790	.	+	0	ID=cds-WP_000793278.1;Parent=gene-C9F00_RS00285;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9F00_RS00285;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	4948	5637	.	-	.	ID=gene-C9F00_RS00290;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=C9F00_RS00290;old_locus_tag=C9F00_00300
NZ_PYKC01000002.1	Protein Homology	CDS	4948	5637	.	-	0	ID=cds-WP_000771454.1;Parent=gene-C9F00_RS00290;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9F00_RS00290;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	5814	7961	.	-	.	ID=gene-C9F00_RS00295;Name=C9F00_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00295;old_locus_tag=C9F00_00305
NZ_PYKC01000002.1	Protein Homology	CDS	5814	7961	.	-	0	ID=cds-WP_011233236.1;Parent=gene-C9F00_RS00295;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9F00_RS00295;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:complement(7542..7544)%2Caa:Sec);transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	8316	9224	.	-	.	ID=gene-C9F00_RS00300;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9F00_RS00300;old_locus_tag=C9F00_00310
NZ_PYKC01000002.1	Protein Homology	CDS	8316	9224	.	-	0	ID=cds-WP_000457024.1;Parent=gene-C9F00_RS00300;Dbxref=GenBank:WP_000457024.1;Name=WP_000457024.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9F00_RS00300;product=lipid A hydroxylase LpxO;protein_id=WP_000457024.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	9402	10307	.	-	.	ID=gene-C9F00_RS00305;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=C9F00_RS00305;old_locus_tag=C9F00_00315
NZ_PYKC01000002.1	Protein Homology	CDS	9402	10307	.	-	0	ID=cds-WP_031605711.1;Parent=gene-C9F00_RS00305;Dbxref=GenBank:WP_031605711.1;Name=WP_031605711.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907525.1;locus_tag=C9F00_RS00305;product=allose kinase;protein_id=WP_031605711.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	10291	10986	.	-	.	ID=gene-C9F00_RS00310;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=C9F00_RS00310;old_locus_tag=C9F00_00320
NZ_PYKC01000002.1	Protein Homology	CDS	10291	10986	.	-	0	ID=cds-WP_031605712.1;Parent=gene-C9F00_RS00310;Dbxref=GenBank:WP_031605712.1;Name=WP_031605712.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=C9F00_RS00310;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_031605712.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	10997	11977	.	-	.	ID=gene-C9F00_RS00315;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=C9F00_RS00315;old_locus_tag=C9F00_00325
NZ_PYKC01000002.1	Protein Homology	CDS	10997	11977	.	-	0	ID=cds-WP_031605713.1;Parent=gene-C9F00_RS00315;Dbxref=GenBank:WP_031605713.1;Name=WP_031605713.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9F00_RS00315;product=D-allose ABC transporter permease;protein_id=WP_031605713.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	11956	13488	.	-	.	ID=gene-C9F00_RS00320;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=C9F00_RS00320;old_locus_tag=C9F00_00330
NZ_PYKC01000002.1	Protein Homology	CDS	11956	13488	.	-	0	ID=cds-WP_031605714.1;Parent=gene-C9F00_RS00320;Dbxref=GenBank:WP_031605714.1;Name=WP_031605714.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=C9F00_RS00320;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_031605714.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	13608	14549	.	-	.	ID=gene-C9F00_RS00325;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=C9F00_RS00325;old_locus_tag=C9F00_00335
NZ_PYKC01000002.1	Protein Homology	CDS	13608	14549	.	-	0	ID=cds-WP_135369150.1;Parent=gene-C9F00_RS00325;Dbxref=GenBank:WP_135369150.1;Name=WP_135369150.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9F00_RS00325;product=D-allose transporter substrate-binding protein;protein_id=WP_135369150.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	14612	15502	.	-	.	ID=gene-C9F00_RS00330;Name=C9F00_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00330;old_locus_tag=C9F00_00340
NZ_PYKC01000002.1	Protein Homology	CDS	14612	15502	.	-	0	ID=cds-WP_031605717.1;Parent=gene-C9F00_RS00330;Dbxref=GenBank:WP_031605717.1;Name=WP_031605717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=C9F00_RS00330;product=MurR/RpiR family transcriptional regulator;protein_id=WP_031605717.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	15862	16311	.	+	.	ID=gene-C9F00_RS00335;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=C9F00_RS00335;old_locus_tag=C9F00_00345
NZ_PYKC01000002.1	Protein Homology	CDS	15862	16311	.	+	0	ID=cds-WP_057935359.1;Parent=gene-C9F00_RS00335;Dbxref=GenBank:WP_057935359.1;Name=WP_057935359.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=C9F00_RS00335;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_057935359.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	16441	16884	.	-	.	ID=gene-C9F00_RS00340;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9F00_RS00340;old_locus_tag=C9F00_00350
NZ_PYKC01000002.1	Protein Homology	CDS	16441	16884	.	-	0	ID=cds-WP_001131305.1;Parent=gene-C9F00_RS00340;Dbxref=GenBank:WP_001131305.1;Name=WP_001131305.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9F00_RS00340;product=VOC family metalloprotein YjdN;protein_id=WP_001131305.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	17004	17339	.	-	.	ID=gene-C9F00_RS00345;Name=C9F00_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00345;old_locus_tag=C9F00_00355
NZ_PYKC01000002.1	Protein Homology	CDS	17004	17339	.	-	0	ID=cds-WP_000056482.1;Parent=gene-C9F00_RS00345;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=C9F00_RS00345;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	17807	19309	.	+	.	ID=gene-C9F00_RS00350;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9F00_RS00350;old_locus_tag=C9F00_00360
NZ_PYKC01000002.1	Protein Homology	CDS	17807	19309	.	+	0	ID=cds-WP_000919710.1;Parent=gene-C9F00_RS00350;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9F00_RS00350;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	19379	19468	.	+	.	ID=gene-C9F00_RS00355;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9F00_RS00355;old_locus_tag=C9F00_00365
NZ_PYKC01000002.1	Protein Homology	CDS	19379	19468	.	+	0	ID=cds-WP_000844399.1;Parent=gene-C9F00_RS00355;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9F00_RS00355;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	19476	20546	.	-	.	ID=gene-C9F00_RS00360;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9F00_RS00360;old_locus_tag=C9F00_00370
NZ_PYKC01000002.1	Protein Homology	CDS	19476	20546	.	-	0	ID=cds-WP_001212189.1;Parent=gene-C9F00_RS00360;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9F00_RS00360;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	20556	21224	.	-	.	ID=gene-C9F00_RS00365;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9F00_RS00365;old_locus_tag=C9F00_00375
NZ_PYKC01000002.1	Protein Homology	CDS	20556	21224	.	-	0	ID=cds-WP_000697899.1;Parent=gene-C9F00_RS00365;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9F00_RS00365;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	21221	22864	.	-	.	ID=gene-C9F00_RS00370;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9F00_RS00370;old_locus_tag=C9F00_00380
NZ_PYKC01000002.1	Protein Homology	CDS	21221	22864	.	-	0	ID=cds-WP_000919290.1;Parent=gene-C9F00_RS00370;Dbxref=GenBank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9F00_RS00370;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	22998	24335	.	-	.	ID=gene-C9F00_RS00375;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9F00_RS00375;old_locus_tag=C9F00_00385
NZ_PYKC01000002.1	Protein Homology	CDS	22998	24335	.	-	0	ID=cds-WP_000093130.1;Parent=gene-C9F00_RS00375;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9F00_RS00375;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	24475	25236	.	-	.	ID=gene-C9F00_RS00380;Name=C9F00_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00380;old_locus_tag=C9F00_00390
NZ_PYKC01000002.1	Protein Homology	CDS	24475	25236	.	-	0	ID=cds-WP_023259223.1;Parent=gene-C9F00_RS00380;Dbxref=GenBank:WP_023259223.1;Name=WP_023259223.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9F00_RS00380;product=AraC family transcriptional regulator;protein_id=WP_023259223.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	25533	27800	.	-	.	ID=gene-C9F00_RS00385;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9F00_RS00385;old_locus_tag=C9F00_00395
NZ_PYKC01000002.1	Protein Homology	CDS	25533	27800	.	-	0	ID=cds-WP_001542850.1;Parent=gene-C9F00_RS00385;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9F00_RS00385;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	28033	28965	.	-	.	ID=gene-C9F00_RS00390;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9F00_RS00390;old_locus_tag=C9F00_00400
NZ_PYKC01000002.1	Protein Homology	CDS	28033	28965	.	-	0	ID=cds-WP_000106992.1;Parent=gene-C9F00_RS00390;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9F00_RS00390;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	29234	30589	.	+	.	ID=gene-C9F00_RS00395;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9F00_RS00395;old_locus_tag=C9F00_00405
NZ_PYKC01000002.1	Protein Homology	CDS	29234	30589	.	+	0	ID=cds-WP_020437593.1;Parent=gene-C9F00_RS00395;Dbxref=GenBank:WP_020437593.1;Name=WP_020437593.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9F00_RS00395;product=alpha-galactosidase;protein_id=WP_020437593.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	30673	32103	.	+	.	ID=gene-C9F00_RS00400;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9F00_RS00400;old_locus_tag=C9F00_00410
NZ_PYKC01000002.1	Protein Homology	CDS	30673	32103	.	+	0	ID=cds-WP_079802101.1;Parent=gene-C9F00_RS00400;Dbxref=GenBank:WP_079802101.1;Name=WP_079802101.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9F00_RS00400;product=melibiose:sodium transporter MelB;protein_id=WP_079802101.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	32192	33838	.	-	.	ID=gene-C9F00_RS00405;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=C9F00_RS00405;old_locus_tag=C9F00_00415
NZ_PYKC01000002.1	Protein Homology	CDS	32192	33838	.	-	0	ID=cds-WP_052895238.1;Parent=gene-C9F00_RS00405;Dbxref=GenBank:WP_052895238.1;Name=WP_052895238.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=C9F00_RS00405;product=class I fumarate hydratase FumA;protein_id=WP_052895238.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	33934	35274	.	-	.	ID=gene-C9F00_RS00410;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=C9F00_RS00410;old_locus_tag=C9F00_00420
NZ_PYKC01000002.1	Protein Homology	CDS	33934	35274	.	-	0	ID=cds-WP_000899149.1;Parent=gene-C9F00_RS00410;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9F00_RS00410;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	35421	35687	.	-	.	ID=gene-C9F00_RS00415;Name=C9F00_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00415;old_locus_tag=C9F00_00425
NZ_PYKC01000002.1	Protein Homology	CDS	35421	35687	.	-	0	ID=cds-WP_024137308.1;Parent=gene-C9F00_RS00415;Dbxref=GenBank:WP_024137308.1;Name=WP_024137308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9F00_RS00415;product=hypothetical protein;protein_id=WP_024137308.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	36004	36723	.	-	.	ID=gene-C9F00_RS00420;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9F00_RS00420;old_locus_tag=C9F00_00430
NZ_PYKC01000002.1	Protein Homology	CDS	36004	36723	.	-	0	ID=cds-WP_000611307.1;Parent=gene-C9F00_RS00420;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9F00_RS00420;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	36720	38351	.	-	.	ID=gene-C9F00_RS00425;Name=C9F00_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00425;old_locus_tag=C9F00_00435
NZ_PYKC01000002.1	Protein Homology	CDS	36720	38351	.	-	0	ID=cds-WP_048591426.1;Parent=gene-C9F00_RS00425;Dbxref=GenBank:WP_048591426.1;Name=WP_048591426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9F00_RS00425;product=sensor histidine kinase;protein_id=WP_048591426.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	pseudogene	38726	41154	.	+	.	ID=gene-C9F00_RS00430;Name=C9F00_RS00430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS00430;old_locus_tag=C9F00_00440;pseudo=true
NZ_PYKC01000002.1	Protein Homology	CDS	38726	41154	.	+	0	ID=cds-C9F00_RS00430;Parent=gene-C9F00_RS00430;Note=frameshifted;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9F00_RS00430;product=DMSO/selenate family reductase complex A subunit;pseudo=true;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	41168	41794	.	+	.	ID=gene-C9F00_RS00435;Name=C9F00_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00435;old_locus_tag=C9F00_00445
NZ_PYKC01000002.1	Protein Homology	CDS	41168	41794	.	+	0	ID=cds-WP_000816143.1;Parent=gene-C9F00_RS00435;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9F00_RS00435;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11
NZ_PYKC01000002.1	RefSeq	gene	41787	42025	.	+	.	ID=gene-C9F00_RS00440;Name=C9F00_RS00440;end_range=42025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00440;old_locus_tag=C9F00_00450;partial=true
NZ_PYKC01000002.1	Protein Homology	CDS	41787	42025	.	+	0	ID=cds-WP_167850709.1;Parent=gene-C9F00_RS00440;Dbxref=GenBank:WP_167850709.1;Name=WP_167850709.1;Ontology_term=GO:0019645,GO:0016020;end_range=42025,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9F00_RS00440;partial=true;product=DmsC/YnfH family molybdoenzyme membrane anchor subunit;protein_id=WP_167850709.1;transl_table=11
##sequence-region NZ_PYKC01000075.1 1 41806
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000075.1	RefSeq	region	1	41806	.	+	.	ID=NZ_PYKC01000075.1:1..41806;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000075.1	RefSeq	pseudogene	60	185	.	-	.	ID=gene-C9F00_RS24450;Name=C9F00_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24450;partial=true;pseudo=true;start_range=.,60
NZ_PYKC01000075.1	Protein Homology	CDS	60	185	.	-	0	ID=cds-C9F00_RS24450;Parent=gene-C9F00_RS24450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015953770.1;locus_tag=C9F00_RS24450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,60;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	375	1040	.	-	.	ID=gene-C9F00_RS12685;Name=C9F00_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12685;old_locus_tag=C9F00_13000
NZ_PYKC01000075.1	Protein Homology	CDS	375	1040	.	-	0	ID=cds-WP_001171581.1;Parent=gene-C9F00_RS12685;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9F00_RS12685;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	1027	1656	.	-	.	ID=gene-C9F00_RS12690;Name=C9F00_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12690;old_locus_tag=C9F00_13005
NZ_PYKC01000075.1	Protein Homology	CDS	1027	1656	.	-	0	ID=cds-WP_000723776.1;Parent=gene-C9F00_RS12690;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9F00_RS12690;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	1776	2714	.	-	.	ID=gene-C9F00_RS12695;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9F00_RS12695;old_locus_tag=C9F00_13010
NZ_PYKC01000075.1	Protein Homology	CDS	1776	2714	.	-	0	ID=cds-WP_001658488.1;Parent=gene-C9F00_RS12695;Dbxref=GenBank:WP_001658488.1;Name=WP_001658488.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F00_RS12695;product=malate dehydrogenase;protein_id=WP_001658488.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	3129	3599	.	+	.	ID=gene-C9F00_RS12700;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9F00_RS12700;old_locus_tag=C9F00_13015
NZ_PYKC01000075.1	Protein Homology	CDS	3129	3599	.	+	0	ID=cds-WP_001257852.1;Parent=gene-C9F00_RS12700;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9F00_RS12700;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	3964	4227	.	+	.	ID=gene-C9F00_RS12705;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9F00_RS12705;old_locus_tag=C9F00_13020
NZ_PYKC01000075.1	Protein Homology	CDS	3964	4227	.	+	0	ID=cds-WP_000695695.1;Parent=gene-C9F00_RS12705;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9F00_RS12705;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	4331	4597	.	+	.	ID=gene-C9F00_RS12710;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9F00_RS12710;old_locus_tag=C9F00_13025
NZ_PYKC01000075.1	Protein Homology	CDS	4331	4597	.	+	0	ID=cds-WP_000853277.1;Parent=gene-C9F00_RS12710;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9F00_RS12710;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	4658	4930	.	-	.	ID=gene-C9F00_RS12715;Name=C9F00_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12715;old_locus_tag=C9F00_13030
NZ_PYKC01000075.1	Protein Homology	CDS	4658	4930	.	-	0	ID=cds-WP_001103887.1;Parent=gene-C9F00_RS12715;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9F00_RS12715;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	5102	7069	.	-	.	ID=gene-C9F00_RS12720;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9F00_RS12720;old_locus_tag=C9F00_13035
NZ_PYKC01000075.1	Protein Homology	CDS	5102	7069	.	-	0	ID=cds-WP_000510913.1;Parent=gene-C9F00_RS12720;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9F00_RS12720;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	7075	8007	.	-	.	ID=gene-C9F00_RS12725;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9F00_RS12725;old_locus_tag=C9F00_13040
NZ_PYKC01000075.1	Protein Homology	CDS	7075	8007	.	-	0	ID=cds-WP_000855134.1;Parent=gene-C9F00_RS12725;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9F00_RS12725;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	8015	8218	.	-	.	ID=gene-C9F00_RS12730;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9F00_RS12730;old_locus_tag=C9F00_13045
NZ_PYKC01000075.1	Protein Homology	CDS	8015	8218	.	-	0	ID=cds-WP_000051840.1;Parent=gene-C9F00_RS12730;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9F00_RS12730;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	8400	9329	.	+	.	ID=gene-C9F00_RS12735;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9F00_RS12735;old_locus_tag=C9F00_13050
NZ_PYKC01000075.1	Protein Homology	CDS	8400	9329	.	+	0	ID=cds-WP_000440300.1;Parent=gene-C9F00_RS12735;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9F00_RS12735;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	9451	10896	.	-	.	ID=gene-C9F00_RS12740;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9F00_RS12740;old_locus_tag=C9F00_13055
NZ_PYKC01000075.1	Protein Homology	CDS	9451	10896	.	-	0	ID=cds-WP_000055940.1;Parent=gene-C9F00_RS12740;Dbxref=GenBank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9F00_RS12740;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	11041	14841	.	-	.	ID=gene-C9F00_RS12745;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=C9F00_RS12745;old_locus_tag=C9F00_13060
NZ_PYKC01000075.1	Protein Homology	CDS	11041	14841	.	-	0	ID=cds-WP_135492319.1;Parent=gene-C9F00_RS12745;Dbxref=GenBank:WP_135492319.1;Name=WP_135492319.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9F00_RS12745;product=AsmA2 domain-containing protein YhdP;protein_id=WP_135492319.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	14948	16417	.	-	.	ID=gene-C9F00_RS12750;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=C9F00_RS12750;old_locus_tag=C9F00_13065
NZ_PYKC01000075.1	Protein Homology	CDS	14948	16417	.	-	0	ID=cds-WP_135492321.1;Parent=gene-C9F00_RS12750;Dbxref=GenBank:WP_135492321.1;Name=WP_135492321.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9F00_RS12750;product=ribonuclease G;protein_id=WP_135492321.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	16407	17000	.	-	.	ID=gene-C9F00_RS12755;Name=C9F00_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12755;old_locus_tag=C9F00_13070
NZ_PYKC01000075.1	Protein Homology	CDS	16407	17000	.	-	0	ID=cds-WP_000210303.1;Parent=gene-C9F00_RS12755;Dbxref=GenBank:WP_000210303.1;Name=WP_000210303.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9F00_RS12755;product=Maf family protein;protein_id=WP_000210303.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	17009	17497	.	-	.	ID=gene-C9F00_RS12760;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F00_RS12760;old_locus_tag=C9F00_13075
NZ_PYKC01000075.1	Protein Homology	CDS	17009	17497	.	-	0	ID=cds-WP_000179403.1;Parent=gene-C9F00_RS12760;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9F00_RS12760;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	17500	18552	.	-	.	ID=gene-C9F00_RS12765;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9F00_RS12765;old_locus_tag=C9F00_13080
NZ_PYKC01000075.1	Protein Homology	CDS	17500	18552	.	-	0	ID=cds-WP_000802536.1;Parent=gene-C9F00_RS12765;Dbxref=GenBank:WP_000802536.1;Name=WP_000802536.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9F00_RS12765;product=rod shape-determining protein MreC;protein_id=WP_000802536.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	18617	19660	.	-	.	ID=gene-C9F00_RS12770;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=C9F00_RS12770;old_locus_tag=C9F00_13085
NZ_PYKC01000075.1	Protein Homology	CDS	18617	19660	.	-	0	ID=cds-WP_000913396.1;Parent=gene-C9F00_RS12770;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9F00_RS12770;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	19968	21908	.	-	.	ID=gene-C9F00_RS12780;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9F00_RS12780;old_locus_tag=C9F00_13100
NZ_PYKC01000075.1	Protein Homology	CDS	19968	21908	.	-	0	ID=cds-WP_001241381.1;Parent=gene-C9F00_RS12780;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9F00_RS12780;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	22112	23086	.	+	.	ID=gene-C9F00_RS12785;Name=C9F00_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12785;old_locus_tag=C9F00_13105
NZ_PYKC01000075.1	Protein Homology	CDS	22112	23086	.	+	0	ID=cds-WP_115408942.1;Parent=gene-C9F00_RS12785;Dbxref=GenBank:WP_115408942.1;Name=WP_115408942.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9F00_RS12785;product=MDR family oxidoreductase;protein_id=WP_115408942.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	23199	24203	.	+	.	ID=gene-C9F00_RS12790;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9F00_RS12790;old_locus_tag=C9F00_13110
NZ_PYKC01000075.1	Protein Homology	CDS	23199	24203	.	+	0	ID=cds-WP_000723876.1;Parent=gene-C9F00_RS12790;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9F00_RS12790;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	24204	24803	.	+	.	ID=gene-C9F00_RS12795;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9F00_RS12795;old_locus_tag=C9F00_13115
NZ_PYKC01000075.1	Protein Homology	CDS	24204	24803	.	+	0	ID=cds-WP_001241496.1;Parent=gene-C9F00_RS12795;Dbxref=GenBank:WP_001241496.1;Name=WP_001241496.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9F00_RS12795;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001241496.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	25196	25666	.	+	.	ID=gene-C9F00_RS12800;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9F00_RS12800;old_locus_tag=C9F00_13120
NZ_PYKC01000075.1	Protein Homology	CDS	25196	25666	.	+	0	ID=cds-WP_000354626.1;Parent=gene-C9F00_RS12800;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9F00_RS12800;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	25677	27026	.	+	.	ID=gene-C9F00_RS12805;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9F00_RS12805;old_locus_tag=C9F00_13125
NZ_PYKC01000075.1	Protein Homology	CDS	25677	27026	.	+	0	ID=cds-WP_000884627.1;Parent=gene-C9F00_RS12805;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9F00_RS12805;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	27135	27377	.	+	.	ID=gene-C9F00_RS12810;Name=C9F00_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12810;old_locus_tag=C9F00_13130
NZ_PYKC01000075.1	Protein Homology	CDS	27135	27377	.	+	0	ID=cds-WP_000340018.1;Parent=gene-C9F00_RS12810;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9F00_RS12810;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	27367	28818	.	+	.	ID=gene-C9F00_RS12815;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F00_RS12815;old_locus_tag=C9F00_13135
NZ_PYKC01000075.1	Protein Homology	CDS	27367	28818	.	+	0	ID=cds-WP_001175681.1;Parent=gene-C9F00_RS12815;Dbxref=GenBank:WP_001175681.1;Name=WP_001175681.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9F00_RS12815;product=sodium/pantothenate symporter;protein_id=WP_001175681.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	28830	29711	.	+	.	ID=gene-C9F00_RS12820;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9F00_RS12820;old_locus_tag=C9F00_13140
NZ_PYKC01000075.1	Protein Homology	CDS	28830	29711	.	+	0	ID=cds-WP_001145849.1;Parent=gene-C9F00_RS12820;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9F00_RS12820;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	30372	31337	.	+	.	ID=gene-C9F00_RS12830;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9F00_RS12830;old_locus_tag=C9F00_13145
NZ_PYKC01000075.1	Protein Homology	CDS	30372	31337	.	+	0	ID=cds-WP_001219664.1;Parent=gene-C9F00_RS12830;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9F00_RS12830;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	31363	31659	.	+	.	ID=gene-C9F00_RS12835;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9F00_RS12835;old_locus_tag=C9F00_13150
NZ_PYKC01000075.1	Protein Homology	CDS	31363	31659	.	+	0	ID=cds-WP_000462905.1;Parent=gene-C9F00_RS12835;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9F00_RS12835;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	31745	32629	.	+	.	ID=gene-C9F00_RS12840;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12840;old_locus_tag=C9F00_13155
NZ_PYKC01000075.1	Protein Homology	CDS	31745	32629	.	+	0	ID=cds-WP_000642611.1;Parent=gene-C9F00_RS12840;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9F00_RS12840;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	32712	32876	.	+	.	ID=gene-C9F00_RS12845;Name=C9F00_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12845;old_locus_tag=C9F00_13160
NZ_PYKC01000075.1	Protein Homology	CDS	32712	32876	.	+	0	ID=cds-WP_000620015.1;Parent=gene-C9F00_RS12845;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9F00_RS12845;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	33027	35126	.	+	.	ID=gene-C9F00_RS12850;Name=C9F00_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12850;old_locus_tag=C9F00_13165
NZ_PYKC01000075.1	Protein Homology	CDS	33027	35126	.	+	0	ID=cds-WP_023250386.1;Parent=gene-C9F00_RS12850;Dbxref=GenBank:WP_023250386.1;Name=WP_023250386.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F00_RS12850;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_023250386.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	35129	35791	.	-	.	ID=gene-C9F00_RS12855;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9F00_RS12855;old_locus_tag=C9F00_13170
NZ_PYKC01000075.1	Protein Homology	CDS	35129	35791	.	-	0	ID=cds-WP_001085725.1;Parent=gene-C9F00_RS12855;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9F00_RS12855;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	36205	37362	.	+	.	ID=gene-C9F00_RS12860;Name=C9F00_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12860;old_locus_tag=C9F00_13175
NZ_PYKC01000075.1	Protein Homology	CDS	36205	37362	.	+	0	ID=cds-WP_000160383.1;Parent=gene-C9F00_RS12860;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F00_RS12860;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	37374	40487	.	+	.	ID=gene-C9F00_RS12865;Name=C9F00_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12865;old_locus_tag=C9F00_13180
NZ_PYKC01000075.1	Protein Homology	CDS	37374	40487	.	+	0	ID=cds-WP_001273283.1;Parent=gene-C9F00_RS12865;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9F00_RS12865;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	40724	40945	.	+	.	ID=gene-C9F00_RS12870;Name=C9F00_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12870;old_locus_tag=C9F00_13185
NZ_PYKC01000075.1	Protein Homology	CDS	40724	40945	.	+	0	ID=cds-WP_000825645.1;Parent=gene-C9F00_RS12870;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9F00_RS12870;product=membrane protein;protein_id=WP_000825645.1;transl_table=11
NZ_PYKC01000075.1	RefSeq	gene	41728	41806	.	-	.	ID=gene-C9F00_RS24825;Name=rrf;end_range=41806,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS24825;partial=true
NZ_PYKC01000075.1	cmsearch	rRNA	41728	41806	.	-	.	ID=rna-C9F00_RS24825;Parent=gene-C9F00_RS24825;Dbxref=RFAM:RF00001;end_range=41806,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24825;partial=true;product=5S ribosomal RNA
NZ_PYKC01000075.1	cmsearch	exon	41728	41806	.	-	.	ID=exon-C9F00_RS24825-1;Parent=rna-C9F00_RS24825;Dbxref=RFAM:RF00001;end_range=41806,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24825;partial=true;product=5S ribosomal RNA
##sequence-region NZ_PYKC01000028.1 1 41593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000028.1	RefSeq	region	1	41593	.	+	.	ID=NZ_PYKC01000028.1:1..41593;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000028.1	RefSeq	gene	1	562	.	-	.	ID=gene-C9F00_RS05000;Name=C9F00_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05000;old_locus_tag=C9F00_05080;partial=true;start_range=.,1
NZ_PYKC01000028.1	Protein Homology	CDS	1	562	.	-	0	ID=cds-WP_135492162.1;Parent=gene-C9F00_RS05000;Dbxref=GenBank:WP_135492162.1;Name=WP_135492162.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=C9F00_RS05000;partial=true;product=glycerate kinase;protein_id=WP_135492162.1;start_range=.,1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	585	1883	.	-	.	ID=gene-C9F00_RS05005;Name=C9F00_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05005;old_locus_tag=C9F00_05085
NZ_PYKC01000028.1	Protein Homology	CDS	585	1883	.	-	0	ID=cds-WP_000484505.1;Parent=gene-C9F00_RS05005;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9F00_RS05005;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	1942	3303	.	-	.	ID=gene-C9F00_RS05010;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=C9F00_RS05010;old_locus_tag=C9F00_05090
NZ_PYKC01000028.1	Protein Homology	CDS	1942	3303	.	-	0	ID=cds-WP_000006865.1;Parent=gene-C9F00_RS05010;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=C9F00_RS05010;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	3382	4836	.	-	.	ID=gene-C9F00_RS05015;Name=C9F00_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05015;old_locus_tag=C9F00_05095
NZ_PYKC01000028.1	Protein Homology	CDS	3382	4836	.	-	0	ID=cds-WP_000401066.1;Parent=gene-C9F00_RS05015;Dbxref=GenBank:WP_000401066.1;Name=WP_000401066.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9F00_RS05015;product=allantoin transporter;protein_id=WP_000401066.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	4932	6179	.	-	.	ID=gene-C9F00_RS05020;Name=C9F00_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05020;old_locus_tag=C9F00_05100
NZ_PYKC01000028.1	Protein Homology	CDS	4932	6179	.	-	0	ID=cds-WP_000005063.1;Parent=gene-C9F00_RS05020;Dbxref=GenBank:WP_000005063.1;Name=WP_000005063.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=C9F00_RS05020;product=MFS transporter;protein_id=WP_000005063.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	6245	7123	.	-	.	ID=gene-C9F00_RS05025;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=C9F00_RS05025;old_locus_tag=C9F00_05105
NZ_PYKC01000028.1	Protein Homology	CDS	6245	7123	.	-	0	ID=cds-WP_000765815.1;Parent=gene-C9F00_RS05025;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9F00_RS05025;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	7224	8000	.	-	.	ID=gene-C9F00_RS05030;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=C9F00_RS05030;old_locus_tag=C9F00_05110
NZ_PYKC01000028.1	Protein Homology	CDS	7224	8000	.	-	0	ID=cds-WP_000943591.1;Parent=gene-C9F00_RS05030;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9F00_RS05030;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	8013	9794	.	-	.	ID=gene-C9F00_RS05035;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9F00_RS05035;old_locus_tag=C9F00_05115
NZ_PYKC01000028.1	Protein Homology	CDS	8013	9794	.	-	0	ID=cds-WP_001096865.1;Parent=gene-C9F00_RS05035;Dbxref=GenBank:WP_001096865.1;Name=WP_001096865.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9F00_RS05035;product=glyoxylate carboligase;protein_id=WP_001096865.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	9879	10697	.	-	.	ID=gene-C9F00_RS05040;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=C9F00_RS05040;old_locus_tag=C9F00_05120
NZ_PYKC01000028.1	Protein Homology	CDS	9879	10697	.	-	0	ID=cds-WP_000141265.1;Parent=gene-C9F00_RS05040;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9F00_RS05040;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	10776	11258	.	-	.	ID=gene-C9F00_RS05045;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=C9F00_RS05045;old_locus_tag=C9F00_05125
NZ_PYKC01000028.1	Protein Homology	CDS	10776	11258	.	-	0	ID=cds-WP_000764659.1;Parent=gene-C9F00_RS05045;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9F00_RS05045;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	11485	12411	.	+	.	ID=gene-C9F00_RS05050;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=C9F00_RS05050;old_locus_tag=C9F00_05130
NZ_PYKC01000028.1	Protein Homology	CDS	11485	12411	.	+	0	ID=cds-WP_000460169.1;Parent=gene-C9F00_RS05050;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9F00_RS05050;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	12481	13575	.	+	.	ID=gene-C9F00_RS05055;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=C9F00_RS05055;old_locus_tag=C9F00_05135
NZ_PYKC01000028.1	Protein Homology	CDS	12481	13575	.	+	0	ID=cds-WP_001154077.1;Parent=gene-C9F00_RS05055;Dbxref=GenBank:WP_001154077.1;Name=WP_001154077.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9F00_RS05055;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154077.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	13604	14263	.	-	.	ID=gene-C9F00_RS05060;Name=C9F00_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05060;old_locus_tag=C9F00_05140
NZ_PYKC01000028.1	Protein Homology	CDS	13604	14263	.	-	0	ID=cds-WP_000342247.1;Parent=gene-C9F00_RS05060;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9F00_RS05060;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	14256	15272	.	-	.	ID=gene-C9F00_RS05065;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9F00_RS05065;old_locus_tag=C9F00_05145
NZ_PYKC01000028.1	Protein Homology	CDS	14256	15272	.	-	0	ID=cds-WP_000569660.1;Parent=gene-C9F00_RS05065;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9F00_RS05065;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	15309	16139	.	-	.	ID=gene-C9F00_RS05070;Name=C9F00_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05070;old_locus_tag=C9F00_05150
NZ_PYKC01000028.1	Protein Homology	CDS	15309	16139	.	-	0	ID=cds-WP_000524311.1;Parent=gene-C9F00_RS05070;Dbxref=GenBank:WP_000524311.1;Name=WP_000524311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9F00_RS05070;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524311.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	16396	17529	.	-	.	ID=gene-C9F00_RS05075;Name=C9F00_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05075;old_locus_tag=C9F00_05155
NZ_PYKC01000028.1	Protein Homology	CDS	16396	17529	.	-	0	ID=cds-WP_079801861.1;Parent=gene-C9F00_RS05075;Dbxref=GenBank:WP_079801861.1;Name=WP_079801861.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9F00_RS05075;product=porin;protein_id=WP_079801861.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	17716	20130	.	-	.	ID=gene-C9F00_RS05080;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=C9F00_RS05080;old_locus_tag=C9F00_05160
NZ_PYKC01000028.1	Protein Homology	CDS	17716	20130	.	-	0	ID=cds-WP_080222944.1;Parent=gene-C9F00_RS05080;Dbxref=GenBank:WP_080222944.1;Name=WP_080222944.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F00_RS05080;product=putative ABC transporter permease subunit YbbP;protein_id=WP_080222944.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	20127	20813	.	-	.	ID=gene-C9F00_RS05085;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=C9F00_RS05085;old_locus_tag=C9F00_05165
NZ_PYKC01000028.1	Protein Homology	CDS	20127	20813	.	-	0	ID=cds-WP_001110598.1;Parent=gene-C9F00_RS05085;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9F00_RS05085;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	20784	21398	.	+	.	ID=gene-C9F00_RS05090;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9F00_RS05090;old_locus_tag=C9F00_05170
NZ_PYKC01000028.1	Protein Homology	CDS	20784	21398	.	+	0	ID=cds-WP_001010576.1;Parent=gene-C9F00_RS05090;Dbxref=GenBank:WP_001010576.1;Name=WP_001010576.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9F00_RS05090;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010576.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	21553	22323	.	+	.	ID=gene-C9F00_RS05095;Name=C9F00_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05095;old_locus_tag=C9F00_05175
NZ_PYKC01000028.1	Protein Homology	CDS	21553	22323	.	+	0	ID=cds-WP_001172804.1;Parent=gene-C9F00_RS05095;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9F00_RS05095;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	22383	23237	.	+	.	ID=gene-C9F00_RS05100;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9F00_RS05100;old_locus_tag=C9F00_05180
NZ_PYKC01000028.1	Protein Homology	CDS	22383	23237	.	+	0	ID=cds-WP_135369148.1;Parent=gene-C9F00_RS05100;Dbxref=GenBank:WP_135369148.1;Name=WP_135369148.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9F00_RS05100;product=chaperedoxin;protein_id=WP_135369148.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	23323	24102	.	-	.	ID=gene-C9F00_RS05105;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9F00_RS05105;old_locus_tag=C9F00_05185
NZ_PYKC01000028.1	Protein Homology	CDS	23323	24102	.	-	0	ID=cds-WP_001002130.1;Parent=gene-C9F00_RS05105;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9F00_RS05105;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	24089	24766	.	-	.	ID=gene-C9F00_RS05110;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=C9F00_RS05110;old_locus_tag=C9F00_05190
NZ_PYKC01000028.1	Protein Homology	CDS	24089	24766	.	-	0	ID=cds-WP_080154150.1;Parent=gene-C9F00_RS05110;Dbxref=GenBank:WP_080154150.1;Name=WP_080154150.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9F00_RS05110;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_080154150.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	24913	25830	.	+	.	ID=gene-C9F00_RS05115;Name=C9F00_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05115;old_locus_tag=C9F00_05195
NZ_PYKC01000028.1	Protein Homology	CDS	24913	25830	.	+	0	ID=cds-WP_000906146.1;Parent=gene-C9F00_RS05115;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9F00_RS05115;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	25827	26279	.	+	.	ID=gene-C9F00_RS05120;Name=C9F00_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05120;old_locus_tag=C9F00_05200
NZ_PYKC01000028.1	Protein Homology	CDS	25827	26279	.	+	0	ID=cds-WP_000561177.1;Parent=gene-C9F00_RS05120;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9F00_RS05120;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	26280	26696	.	-	.	ID=gene-C9F00_RS05125;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9F00_RS05125;old_locus_tag=C9F00_05205
NZ_PYKC01000028.1	Protein Homology	CDS	26280	26696	.	-	0	ID=cds-WP_001026760.1;Parent=gene-C9F00_RS05125;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9F00_RS05125;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	26806	29307	.	+	.	ID=gene-C9F00_RS05130;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9F00_RS05130;old_locus_tag=C9F00_05210
NZ_PYKC01000028.1	Protein Homology	CDS	26806	29307	.	+	0	ID=cds-WP_000083913.1;Parent=gene-C9F00_RS05130;Dbxref=GenBank:WP_000083913.1;Name=WP_000083913.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9F00_RS05130;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083913.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	29461	30288	.	+	.	ID=gene-C9F00_RS05135;Name=C9F00_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05135;old_locus_tag=C9F00_05215
NZ_PYKC01000028.1	Protein Homology	CDS	29461	30288	.	+	0	ID=cds-WP_080160062.1;Parent=gene-C9F00_RS05135;Dbxref=GenBank:WP_080160062.1;Name=WP_080160062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9F00_RS05135;product=lysozyme inhibitor LprI family protein;protein_id=WP_080160062.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	30374	31168	.	+	.	ID=gene-C9F00_RS05140;Name=C9F00_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05140;old_locus_tag=C9F00_05220
NZ_PYKC01000028.1	Protein Homology	CDS	30374	31168	.	+	0	ID=cds-WP_000421861.1;Parent=gene-C9F00_RS05140;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9F00_RS05140;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	31370	31849	.	+	.	ID=gene-C9F00_RS05145;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9F00_RS05145;old_locus_tag=C9F00_05225
NZ_PYKC01000028.1	Protein Homology	CDS	31370	31849	.	+	0	ID=cds-WP_000186618.1;Parent=gene-C9F00_RS05145;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9F00_RS05145;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	31966	33618	.	-	.	ID=gene-C9F00_RS05150;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9F00_RS05150;old_locus_tag=C9F00_05230
NZ_PYKC01000028.1	Protein Homology	CDS	31966	33618	.	-	0	ID=cds-WP_000670398.1;Parent=gene-C9F00_RS05150;Dbxref=GenBank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F00_RS05150;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	33791	35011	.	+	.	ID=gene-C9F00_RS05155;Name=C9F00_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05155;old_locus_tag=C9F00_05235
NZ_PYKC01000028.1	Protein Homology	CDS	33791	35011	.	+	0	ID=cds-WP_001251593.1;Parent=gene-C9F00_RS05155;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9F00_RS05155;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	35226	36902	.	+	.	ID=gene-C9F00_RS05160;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=C9F00_RS05160;old_locus_tag=C9F00_05240
NZ_PYKC01000028.1	Protein Homology	CDS	35226	36902	.	+	0	ID=cds-WP_000546202.1;Parent=gene-C9F00_RS05160;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9F00_RS05160;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	36951	38255	.	-	.	ID=gene-C9F00_RS05165;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=C9F00_RS05165;old_locus_tag=C9F00_05245
NZ_PYKC01000028.1	Protein Homology	CDS	36951	38255	.	-	0	ID=cds-WP_000671592.1;Parent=gene-C9F00_RS05165;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9F00_RS05165;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	38408	39379	.	+	.	ID=gene-C9F00_RS05170;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9F00_RS05170;old_locus_tag=C9F00_05250
NZ_PYKC01000028.1	Protein Homology	CDS	38408	39379	.	+	0	ID=cds-WP_001539341.1;Parent=gene-C9F00_RS05170;Dbxref=GenBank:WP_001539341.1;Name=WP_001539341.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9F00_RS05170;product=acetyl esterase;protein_id=WP_001539341.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	39376	40338	.	-	.	ID=gene-C9F00_RS05175;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9F00_RS05175;old_locus_tag=C9F00_05255
NZ_PYKC01000028.1	Protein Homology	CDS	39376	40338	.	-	0	ID=cds-WP_079801863.1;Parent=gene-C9F00_RS05175;Dbxref=GenBank:WP_079801863.1;Name=WP_079801863.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9F00_RS05175;product=ferrochelatase;protein_id=WP_079801863.1;transl_table=11
NZ_PYKC01000028.1	RefSeq	gene	40567	41211	.	-	.	ID=gene-C9F00_RS05180;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9F00_RS05180;old_locus_tag=C9F00_05260
NZ_PYKC01000028.1	Protein Homology	CDS	40567	41211	.	-	0	ID=cds-WP_001220237.1;Parent=gene-C9F00_RS05180;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9F00_RS05180;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11
##sequence-region NZ_PYKC01000057.1 1 41107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000057.1	RefSeq	region	1	41107	.	+	.	ID=NZ_PYKC01000057.1:1..41107;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000057.1	RefSeq	gene	1	940	.	-	.	ID=gene-C9F00_RS09455;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F00_RS09455;old_locus_tag=C9F00_09670;partial=true;start_range=.,1
NZ_PYKC01000057.1	Protein Homology	CDS	1	940	.	-	0	ID=cds-WP_135492263.1;Parent=gene-C9F00_RS09455;Dbxref=GenBank:WP_135492263.1;Name=WP_135492263.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F00_RS09455;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_135492263.1;start_range=.,1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	956	2524	.	-	.	ID=gene-C9F00_RS09460;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9F00_RS09460;old_locus_tag=C9F00_09675
NZ_PYKC01000057.1	Protein Homology	CDS	956	2524	.	-	0	ID=cds-WP_000884369.1;Parent=gene-C9F00_RS09460;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9F00_RS09460;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	4107	4976	.	-	.	ID=gene-C9F00_RS09465;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9F00_RS09465;old_locus_tag=C9F00_09685
NZ_PYKC01000057.1	Protein Homology	CDS	4107	4976	.	-	0	ID=cds-WP_000114631.1;Parent=gene-C9F00_RS09465;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9F00_RS09465;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	4976	6142	.	-	.	ID=gene-C9F00_RS09470;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9F00_RS09470;old_locus_tag=C9F00_09690
NZ_PYKC01000057.1	Protein Homology	CDS	4976	6142	.	-	0	ID=cds-WP_001048590.1;Parent=gene-C9F00_RS09470;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F00_RS09470;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	6284	7492	.	-	.	ID=gene-C9F00_RS09475;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=C9F00_RS09475;old_locus_tag=C9F00_09695
NZ_PYKC01000057.1	Protein Homology	CDS	6284	7492	.	-	0	ID=cds-WP_000099858.1;Parent=gene-C9F00_RS09475;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9F00_RS09475;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	7507	10308	.	-	.	ID=gene-C9F00_RS09480;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9F00_RS09480;old_locus_tag=C9F00_09700
NZ_PYKC01000057.1	Protein Homology	CDS	7507	10308	.	-	0	ID=cds-WP_001181500.1;Parent=gene-C9F00_RS09480;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9F00_RS09480;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	10832	11548	.	-	.	ID=gene-C9F00_RS09485;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9F00_RS09485;old_locus_tag=C9F00_09705
NZ_PYKC01000057.1	Protein Homology	CDS	10832	11548	.	-	0	ID=cds-WP_001537859.1;Parent=gene-C9F00_RS09485;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9F00_RS09485;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	11565	13331	.	-	.	ID=gene-C9F00_RS09490;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9F00_RS09490;old_locus_tag=C9F00_09710
NZ_PYKC01000057.1	Protein Homology	CDS	11565	13331	.	-	0	ID=cds-WP_000775561.1;Parent=gene-C9F00_RS09490;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9F00_RS09490;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	13331	13678	.	-	.	ID=gene-C9F00_RS09495;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9F00_RS09495;old_locus_tag=C9F00_09715
NZ_PYKC01000057.1	Protein Homology	CDS	13331	13678	.	-	0	ID=cds-WP_000254356.1;Parent=gene-C9F00_RS09495;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9F00_RS09495;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	13672	14076	.	-	.	ID=gene-C9F00_RS09500;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9F00_RS09500;old_locus_tag=C9F00_09720
NZ_PYKC01000057.1	Protein Homology	CDS	13672	14076	.	-	0	ID=cds-WP_000263340.1;Parent=gene-C9F00_RS09500;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9F00_RS09500;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	14459	14590	.	+	.	ID=gene-C9F00_RS24805;Name=C9F00_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24805
NZ_PYKC01000057.1	Protein Homology	CDS	14459	14590	.	+	0	ID=cds-WP_419149719.1;Parent=gene-C9F00_RS24805;Dbxref=GenBank:WP_419149719.1;Name=WP_419149719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=C9F00_RS24805;product=hypothetical protein;protein_id=WP_419149719.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	14816	16099	.	+	.	ID=gene-C9F00_RS09505;Name=C9F00_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09505;old_locus_tag=C9F00_09735
NZ_PYKC01000057.1	Protein Homology	CDS	14816	16099	.	+	0	ID=cds-WP_000785808.1;Parent=gene-C9F00_RS09505;Dbxref=GenBank:WP_000785808.1;Name=WP_000785808.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9F00_RS09505;product=citrate synthase;protein_id=WP_000785808.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	16235	17281	.	+	.	ID=gene-C9F00_RS09510;Name=C9F00_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09510;old_locus_tag=C9F00_09740
NZ_PYKC01000057.1	Protein Homology	CDS	16235	17281	.	+	0	ID=cds-WP_024156732.1;Parent=gene-C9F00_RS09510;Dbxref=GenBank:WP_024156732.1;Name=WP_024156732.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9F00_RS09510;product=AbrB family transcriptional regulator;protein_id=WP_024156732.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	17336	18127	.	-	.	ID=gene-C9F00_RS09515;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9F00_RS09515;old_locus_tag=C9F00_09745
NZ_PYKC01000057.1	Protein Homology	CDS	17336	18127	.	-	0	ID=cds-WP_135369771.1;Parent=gene-C9F00_RS09515;Dbxref=GenBank:WP_135369771.1;Name=WP_135369771.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9F00_RS09515;product=endonuclease VIII;protein_id=WP_135369771.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	18176	18313	.	-	.	ID=gene-C9F00_RS09520;Name=C9F00_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09520;old_locus_tag=C9F00_09750
NZ_PYKC01000057.1	Protein Homology	CDS	18176	18313	.	-	0	ID=cds-WP_001519950.1;Parent=gene-C9F00_RS09520;Dbxref=GenBank:WP_001519950.1;Name=WP_001519950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=C9F00_RS09520;product=hypothetical protein;protein_id=WP_001519950.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	18381	20276	.	-	.	ID=gene-C9F00_RS09525;Name=C9F00_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09525;old_locus_tag=C9F00_09755
NZ_PYKC01000057.1	Protein Homology	CDS	18381	20276	.	-	0	ID=cds-WP_135419939.1;Parent=gene-C9F00_RS09525;Dbxref=GenBank:WP_135419939.1;Name=WP_135419939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=C9F00_RS09525;product=HAD family hydrolase;protein_id=WP_135419939.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	20334	21167	.	-	.	ID=gene-C9F00_RS09530;Name=C9F00_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09530;old_locus_tag=C9F00_09760
NZ_PYKC01000057.1	Protein Homology	CDS	20334	21167	.	-	0	ID=cds-WP_001667936.1;Parent=gene-C9F00_RS09530;Dbxref=GenBank:WP_001667936.1;Name=WP_001667936.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=C9F00_RS09530;product=glycosyltransferase family A protein;protein_id=WP_001667936.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	21360	23150	.	-	.	ID=gene-C9F00_RS09535;Name=C9F00_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09535;old_locus_tag=C9F00_09765
NZ_PYKC01000057.1	Protein Homology	CDS	21360	23150	.	-	0	ID=cds-WP_135419933.1;Parent=gene-C9F00_RS09535;Dbxref=GenBank:WP_135419933.1;Name=WP_135419933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9F00_RS09535;product=glycosyltransferase;protein_id=WP_135419933.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	23244	23954	.	-	.	ID=gene-C9F00_RS09540;Name=C9F00_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09540;old_locus_tag=C9F00_09770
NZ_PYKC01000057.1	Protein Homology	CDS	23244	23954	.	-	0	ID=cds-WP_000702849.1;Parent=gene-C9F00_RS09540;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=C9F00_RS09540;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	23958	24728	.	-	.	ID=gene-C9F00_RS09545;Name=C9F00_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09545;old_locus_tag=C9F00_09775
NZ_PYKC01000057.1	Protein Homology	CDS	23958	24728	.	-	0	ID=cds-WP_000998823.1;Parent=gene-C9F00_RS09545;Dbxref=GenBank:WP_000998823.1;Name=WP_000998823.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=C9F00_RS09545;product=ABC transporter permease;protein_id=WP_000998823.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	24857	25990	.	-	.	ID=gene-C9F00_RS09550;Name=C9F00_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09550;old_locus_tag=C9F00_09780
NZ_PYKC01000057.1	Protein Homology	CDS	24857	25990	.	-	0	ID=cds-WP_000824901.1;Parent=gene-C9F00_RS09550;Dbxref=GenBank:WP_000824901.1;Name=WP_000824901.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=C9F00_RS09550;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	26003	26899	.	-	.	ID=gene-C9F00_RS09555;Name=C9F00_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09555;old_locus_tag=C9F00_09785
NZ_PYKC01000057.1	Protein Homology	CDS	26003	26899	.	-	0	ID=cds-WP_000973919.1;Parent=gene-C9F00_RS09555;Dbxref=GenBank:WP_000973919.1;Name=WP_000973919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=C9F00_RS09555;product=glycosyltransferase;protein_id=WP_000973919.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	26896	28047	.	-	.	ID=gene-C9F00_RS09560;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C9F00_RS09560;old_locus_tag=C9F00_09790
NZ_PYKC01000057.1	Protein Homology	CDS	26896	28047	.	-	0	ID=cds-WP_135369283.1;Parent=gene-C9F00_RS09560;Dbxref=GenBank:WP_135369283.1;Name=WP_135369283.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=C9F00_RS09560;product=UDP-galactopyranose mutase;protein_id=WP_135369283.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	28333	29073	.	-	.	ID=gene-C9F00_RS09565;Name=C9F00_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09565;old_locus_tag=C9F00_09795
NZ_PYKC01000057.1	Protein Homology	CDS	28333	29073	.	-	0	ID=cds-WP_080110501.1;Parent=gene-C9F00_RS09565;Dbxref=GenBank:WP_080110501.1;Name=WP_080110501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=C9F00_RS09565;product=transport protein;protein_id=WP_080110501.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	29075	29410	.	-	.	ID=gene-C9F00_RS09570;Name=C9F00_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09570;old_locus_tag=C9F00_09800
NZ_PYKC01000057.1	Protein Homology	CDS	29075	29410	.	-	0	ID=cds-WP_010988980.1;Parent=gene-C9F00_RS09570;Dbxref=GenBank:WP_010988980.1;Name=WP_010988980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=C9F00_RS09570;product=membrane protein;protein_id=WP_010988980.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	29588	30154	.	-	.	ID=gene-C9F00_RS09575;Name=C9F00_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09575;old_locus_tag=C9F00_09805
NZ_PYKC01000057.1	Protein Homology	CDS	29588	30154	.	-	0	ID=cds-WP_000824704.1;Parent=gene-C9F00_RS09575;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=C9F00_RS09575;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	30214	30345	.	-	.	ID=gene-C9F00_RS09580;Name=C9F00_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09580;old_locus_tag=C9F00_09810
NZ_PYKC01000057.1	Protein Homology	CDS	30214	30345	.	-	0	ID=cds-WP_001521652.1;Parent=gene-C9F00_RS09580;Dbxref=GenBank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=C9F00_RS09580;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	30669	31403	.	-	.	ID=gene-C9F00_RS09585;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9F00_RS09585;old_locus_tag=C9F00_09815
NZ_PYKC01000057.1	Protein Homology	CDS	30669	31403	.	-	0	ID=cds-WP_001017918.1;Parent=gene-C9F00_RS09585;Dbxref=GenBank:WP_001017918.1;Name=WP_001017918.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9F00_RS09585;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017918.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	31393	32325	.	-	.	ID=gene-C9F00_RS09590;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=C9F00_RS09590;old_locus_tag=C9F00_09820
NZ_PYKC01000057.1	Protein Homology	CDS	31393	32325	.	-	0	ID=cds-WP_000932039.1;Parent=gene-C9F00_RS09590;Dbxref=GenBank:WP_000932039.1;Name=WP_000932039.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9F00_RS09590;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932039.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	32319	32975	.	-	.	ID=gene-C9F00_RS09595;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9F00_RS09595;old_locus_tag=C9F00_09825
NZ_PYKC01000057.1	Protein Homology	CDS	32319	32975	.	-	0	ID=cds-WP_001188371.1;Parent=gene-C9F00_RS09595;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9F00_RS09595;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	32991	33734	.	-	.	ID=gene-C9F00_RS09600;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9F00_RS09600;old_locus_tag=C9F00_09830
NZ_PYKC01000057.1	Protein Homology	CDS	32991	33734	.	-	0	ID=cds-WP_000798844.1;Parent=gene-C9F00_RS09600;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F00_RS09600;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	34063	35544	.	+	.	ID=gene-C9F00_RS09605;Name=C9F00_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09605;old_locus_tag=C9F00_09840
NZ_PYKC01000057.1	Protein Homology	CDS	34063	35544	.	+	0	ID=cds-WP_001041123.1;Parent=gene-C9F00_RS09605;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9F00_RS09605;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	35583	37004	.	-	.	ID=gene-C9F00_RS09610;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9F00_RS09610;old_locus_tag=C9F00_09845
NZ_PYKC01000057.1	Protein Homology	CDS	35583	37004	.	-	0	ID=cds-WP_001142022.1;Parent=gene-C9F00_RS09610;Dbxref=GenBank:WP_001142022.1;Name=WP_001142022.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9F00_RS09610;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142022.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	37115	37321	.	-	.	ID=gene-C9F00_RS09615;Name=C9F00_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09615;old_locus_tag=C9F00_09850
NZ_PYKC01000057.1	Protein Homology	CDS	37115	37321	.	-	0	ID=cds-WP_000401433.1;Parent=gene-C9F00_RS09615;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9F00_RS09615;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	37658	37747	.	+	.	ID=gene-C9F00_RS09620;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9F00_RS09620;old_locus_tag=C9F00_09855
NZ_PYKC01000057.1	Protein Homology	CDS	37658	37747	.	+	0	ID=cds-WP_001670793.1;Parent=gene-C9F00_RS09620;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9F00_RS09620;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	37747	39426	.	+	.	ID=gene-C9F00_RS09625;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9F00_RS09625;old_locus_tag=C9F00_09860
NZ_PYKC01000057.1	Protein Homology	CDS	37747	39426	.	+	0	ID=cds-WP_135369079.1;Parent=gene-C9F00_RS09625;Dbxref=GenBank:WP_135369079.1;Name=WP_135369079.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9F00_RS09625;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_135369079.1;transl_table=11
NZ_PYKC01000057.1	RefSeq	gene	39447	41107	.	+	.	ID=gene-C9F00_RS09630;Name=kdpB;end_range=41107,.;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9F00_RS09630;old_locus_tag=C9F00_09865;partial=true
NZ_PYKC01000057.1	Protein Homology	CDS	39447	41107	.	+	0	ID=cds-WP_135492265.1;Parent=gene-C9F00_RS09630;Dbxref=GenBank:WP_135492265.1;Name=WP_135492265.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;end_range=41107,.;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F00_RS09630;partial=true;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_135492265.1;transl_table=11
##sequence-region NZ_PYKC01000079.1 1 39717
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000079.1	RefSeq	region	1	39717	.	+	.	ID=NZ_PYKC01000079.1:1..39717;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000079.1	RefSeq	pseudogene	41	1369	.	-	.	ID=gene-C9F00_RS13280;Name=C9F00_RS13280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS13280;old_locus_tag=C9F00_13610;partial=true;pseudo=true;start_range=.,41
NZ_PYKC01000079.1	Protein Homology	CDS	41	1369	.	-	0	ID=cds-C9F00_RS13280;Parent=gene-C9F00_RS13280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F00_RS13280;partial=true;product=E3 ubiquitin--protein ligase;pseudo=true;start_range=.,41;transl_table=11
NZ_PYKC01000079.1	RefSeq	pseudogene	1636	1728	.	+	.	ID=gene-C9F00_RS13285;Name=C9F00_RS13285;end_range=1728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS13285;old_locus_tag=C9F00_13620;partial=true;pseudo=true;start_range=.,1636
NZ_PYKC01000079.1	Protein Homology	CDS	1636	1728	.	+	0	ID=cds-C9F00_RS13285;Parent=gene-C9F00_RS13285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9F00_RS13285;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,1636;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	1988	4264	.	+	.	ID=gene-C9F00_RS13290;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9F00_RS13290;old_locus_tag=C9F00_13625
NZ_PYKC01000079.1	Protein Homology	CDS	1988	4264	.	+	0	ID=cds-WP_076937135.1;Parent=gene-C9F00_RS13290;Dbxref=GenBank:WP_076937135.1;Name=WP_076937135.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9F00_RS13290;product=thiosulfate reductase PhsA;protein_id=WP_076937135.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	4279	4857	.	+	.	ID=gene-C9F00_RS13295;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9F00_RS13295;old_locus_tag=C9F00_13630
NZ_PYKC01000079.1	Protein Homology	CDS	4279	4857	.	+	0	ID=cds-WP_001016236.1;Parent=gene-C9F00_RS13295;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9F00_RS13295;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	4854	5618	.	+	.	ID=gene-C9F00_RS13300;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=C9F00_RS13300;old_locus_tag=C9F00_13635
NZ_PYKC01000079.1	Protein Homology	CDS	4854	5618	.	+	0	ID=cds-WP_135492333.1;Parent=gene-C9F00_RS13300;Dbxref=GenBank:WP_135492333.1;Name=WP_135492333.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9F00_RS13300;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_135492333.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	5742	6914	.	+	.	ID=gene-C9F00_RS13305;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9F00_RS13305;old_locus_tag=C9F00_13640
NZ_PYKC01000079.1	Protein Homology	CDS	5742	6914	.	+	0	ID=cds-WP_000925044.1;Parent=gene-C9F00_RS13305;Dbxref=GenBank:WP_000925044.1;Name=WP_000925044.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9F00_RS13305;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925044.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	7065	7532	.	+	.	ID=gene-C9F00_RS13310;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9F00_RS13310;old_locus_tag=C9F00_13645
NZ_PYKC01000079.1	Protein Homology	CDS	7065	7532	.	+	0	ID=cds-WP_000384326.1;Parent=gene-C9F00_RS13310;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9F00_RS13310;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	7651	8709	.	+	.	ID=gene-C9F00_RS13315;Name=C9F00_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13315;old_locus_tag=C9F00_13650
NZ_PYKC01000079.1	Protein Homology	CDS	7651	8709	.	+	0	ID=cds-WP_001200854.1;Parent=gene-C9F00_RS13315;Dbxref=GenBank:WP_001200854.1;Name=WP_001200854.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9F00_RS13315;product=FUSC family protein;protein_id=WP_001200854.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	8954	9289	.	+	.	ID=gene-C9F00_RS13320;Name=C9F00_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13320;old_locus_tag=C9F00_13655
NZ_PYKC01000079.1	Protein Homology	CDS	8954	9289	.	+	0	ID=cds-WP_000450405.1;Parent=gene-C9F00_RS13320;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9F00_RS13320;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	9323	10189	.	-	.	ID=gene-C9F00_RS13325;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9F00_RS13325;old_locus_tag=C9F00_13660
NZ_PYKC01000079.1	Protein Homology	CDS	9323	10189	.	-	0	ID=cds-WP_001808089.1;Parent=gene-C9F00_RS13325;Dbxref=GenBank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9F00_RS13325;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	10283	11497	.	-	.	ID=gene-C9F00_RS13330;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=C9F00_RS13330;old_locus_tag=C9F00_13665
NZ_PYKC01000079.1	Protein Homology	CDS	10283	11497	.	-	0	ID=cds-WP_135492335.1;Parent=gene-C9F00_RS13330;Dbxref=GenBank:WP_135492335.1;Name=WP_135492335.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F00_RS13330;product=propanediol utilization propionate kinase PduW;protein_id=WP_135492335.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	11482	11934	.	-	.	ID=gene-C9F00_RS13335;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9F00_RS13335;old_locus_tag=C9F00_13670
NZ_PYKC01000079.1	Protein Homology	CDS	11482	11934	.	-	0	ID=cds-WP_023201213.1;Parent=gene-C9F00_RS13335;Dbxref=GenBank:WP_023201213.1;Name=WP_023201213.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9F00_RS13335;product=propanediol utilization protein PduV;protein_id=WP_023201213.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	11939	12289	.	-	.	ID=gene-C9F00_RS13340;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9F00_RS13340;old_locus_tag=C9F00_13675
NZ_PYKC01000079.1	Protein Homology	CDS	11939	12289	.	-	0	ID=cds-WP_000441103.1;Parent=gene-C9F00_RS13340;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9F00_RS13340;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	12289	12843	.	-	.	ID=gene-C9F00_RS13345;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9F00_RS13345;old_locus_tag=C9F00_13680
NZ_PYKC01000079.1	Protein Homology	CDS	12289	12843	.	-	0	ID=cds-WP_000075772.1;Parent=gene-C9F00_RS13345;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9F00_RS13345;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	12846	14201	.	-	.	ID=gene-C9F00_RS13350;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9F00_RS13350;old_locus_tag=C9F00_13685
NZ_PYKC01000079.1	Protein Homology	CDS	12846	14201	.	-	0	ID=cds-WP_135369280.1;Parent=gene-C9F00_RS13350;Dbxref=GenBank:WP_135369280.1;Name=WP_135369280.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9F00_RS13350;product=cobalamin reductase PduS;protein_id=WP_135369280.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	14198	15310	.	-	.	ID=gene-C9F00_RS13355;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9F00_RS13355;old_locus_tag=C9F00_13690
NZ_PYKC01000079.1	Protein Homology	CDS	14198	15310	.	-	0	ID=cds-WP_001091455.1;Parent=gene-C9F00_RS13355;Dbxref=GenBank:WP_001091455.1;Name=WP_001091455.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9F00_RS13355;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091455.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	15322	16716	.	-	.	ID=gene-C9F00_RS13360;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9F00_RS13360;old_locus_tag=C9F00_13695
NZ_PYKC01000079.1	Protein Homology	CDS	15322	16716	.	-	0	ID=cds-WP_135492337.1;Parent=gene-C9F00_RS13360;Dbxref=GenBank:WP_135492337.1;Name=WP_135492337.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9F00_RS13360;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_135492337.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	16713	17723	.	-	.	ID=gene-C9F00_RS13365;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=C9F00_RS13365;old_locus_tag=C9F00_13700
NZ_PYKC01000079.1	Protein Homology	CDS	16713	17723	.	-	0	ID=cds-WP_001029486.1;Parent=gene-C9F00_RS13365;Dbxref=GenBank:WP_001029486.1;Name=WP_001029486.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=C9F00_RS13365;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029486.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	17733	18008	.	-	.	ID=gene-C9F00_RS13370;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9F00_RS13370;old_locus_tag=C9F00_13705
NZ_PYKC01000079.1	Protein Homology	CDS	17733	18008	.	-	0	ID=cds-WP_000549825.1;Parent=gene-C9F00_RS13370;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9F00_RS13370;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	18012	18503	.	-	.	ID=gene-C9F00_RS13375;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9F00_RS13375;old_locus_tag=C9F00_13710
NZ_PYKC01000079.1	Protein Homology	CDS	18012	18503	.	-	0	ID=cds-WP_058214707.1;Parent=gene-C9F00_RS13375;Dbxref=GenBank:WP_058214707.1;Name=WP_058214707.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9F00_RS13375;product=propanediol utilization microcompartment protein PduM;protein_id=WP_058214707.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	18500	19132	.	-	.	ID=gene-C9F00_RS13380;Name=C9F00_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13380;old_locus_tag=C9F00_13715
NZ_PYKC01000079.1	Protein Homology	CDS	18500	19132	.	-	0	ID=cds-WP_000356732.1;Parent=gene-C9F00_RS13380;Dbxref=GenBank:WP_000356732.1;Name=WP_000356732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9F00_RS13380;product=phosphate propanoyltransferase;protein_id=WP_000356732.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	19132	19614	.	-	.	ID=gene-C9F00_RS13385;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9F00_RS13385;old_locus_tag=C9F00_13720
NZ_PYKC01000079.1	Protein Homology	CDS	19132	19614	.	-	0	ID=cds-WP_078054881.1;Parent=gene-C9F00_RS13385;Dbxref=GenBank:WP_078054881.1;Name=WP_078054881.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9F00_RS13385;product=propanediol utilization microcompartment protein PduK;protein_id=WP_078054881.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	19618	19893	.	-	.	ID=gene-C9F00_RS13390;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9F00_RS13390;old_locus_tag=C9F00_13725
NZ_PYKC01000079.1	Protein Homology	CDS	19618	19893	.	-	0	ID=cds-WP_001057755.1;Parent=gene-C9F00_RS13390;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9F00_RS13390;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	19912	20262	.	-	.	ID=gene-C9F00_RS13395;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9F00_RS13395;old_locus_tag=C9F00_13730
NZ_PYKC01000079.1	Protein Homology	CDS	19912	20262	.	-	0	ID=cds-WP_000377965.1;Parent=gene-C9F00_RS13395;Dbxref=GenBank:WP_000377965.1;Name=WP_000377965.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9F00_RS13395;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377965.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	20252	22084	.	-	.	ID=gene-C9F00_RS13400;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=C9F00_RS13400;old_locus_tag=C9F00_13735
NZ_PYKC01000079.1	Protein Homology	CDS	20252	22084	.	-	0	ID=cds-WP_135492339.1;Parent=gene-C9F00_RS13400;Dbxref=GenBank:WP_135492339.1;Name=WP_135492339.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F00_RS13400;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_135492339.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	22100	22621	.	-	.	ID=gene-C9F00_RS13405;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9F00_RS13405;old_locus_tag=C9F00_13740
NZ_PYKC01000079.1	Protein Homology	CDS	22100	22621	.	-	0	ID=cds-WP_001090600.1;Parent=gene-C9F00_RS13405;Dbxref=GenBank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9F00_RS13405;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	22636	23310	.	-	.	ID=gene-C9F00_RS13410;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9F00_RS13410;old_locus_tag=C9F00_13745
NZ_PYKC01000079.1	Protein Homology	CDS	22636	23310	.	-	0	ID=cds-WP_000405049.1;Parent=gene-C9F00_RS13410;Dbxref=GenBank:WP_000405049.1;Name=WP_000405049.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9F00_RS13410;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405049.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	23321	24985	.	-	.	ID=gene-C9F00_RS13415;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9F00_RS13415;old_locus_tag=C9F00_13750
NZ_PYKC01000079.1	Protein Homology	CDS	23321	24985	.	-	0	ID=cds-WP_001256896.1;Parent=gene-C9F00_RS13415;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9F00_RS13415;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	25004	25816	.	-	.	ID=gene-C9F00_RS13420;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9F00_RS13420;old_locus_tag=C9F00_13755
NZ_PYKC01000079.1	Protein Homology	CDS	25004	25816	.	-	0	ID=cds-WP_000097500.1;Parent=gene-C9F00_RS13420;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9F00_RS13420;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	25813	26097	.	-	.	ID=gene-C9F00_RS13425;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F00_RS13425;old_locus_tag=C9F00_13760
NZ_PYKC01000079.1	Protein Homology	CDS	25813	26097	.	-	0	ID=cds-WP_001183618.1;Parent=gene-C9F00_RS13425;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=C9F00_RS13425;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	26622	27416	.	+	.	ID=gene-C9F00_RS13430;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9F00_RS13430;old_locus_tag=C9F00_13765
NZ_PYKC01000079.1	Protein Homology	CDS	26622	27416	.	+	0	ID=cds-WP_001000023.1;Parent=gene-C9F00_RS13430;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F00_RS13430;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	27633	28544	.	+	.	ID=gene-C9F00_RS13435;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9F00_RS13435;old_locus_tag=C9F00_13770
NZ_PYKC01000079.1	Protein Homology	CDS	27633	28544	.	+	0	ID=cds-WP_000622326.1;Parent=gene-C9F00_RS13435;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9F00_RS13435;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11
NZ_PYKC01000079.1	cmsearch	riboswitch	28870	29044	.	+	.	ID=id-NZ_PYKC01000079.1:28870..29044;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000079.1	RefSeq	gene	29142	30521	.	+	.	ID=gene-C9F00_RS13440;Name=C9F00_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13440;old_locus_tag=C9F00_13775
NZ_PYKC01000079.1	Protein Homology	CDS	29142	30521	.	+	0	ID=cds-WP_135369615.1;Parent=gene-C9F00_RS13440;Dbxref=GenBank:WP_135369615.1;Name=WP_135369615.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F00_RS13440;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_135369615.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	30518	31477	.	+	.	ID=gene-C9F00_RS13445;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9F00_RS13445;old_locus_tag=C9F00_13780
NZ_PYKC01000079.1	Protein Homology	CDS	30518	31477	.	+	0	ID=cds-WP_000153647.1;Parent=gene-C9F00_RS13445;Dbxref=GenBank:WP_000153647.1;Name=WP_000153647.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9F00_RS13445;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153647.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	31488	32120	.	+	.	ID=gene-C9F00_RS13450;Name=C9F00_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13450;old_locus_tag=C9F00_13785
NZ_PYKC01000079.1	Protein Homology	CDS	31488	32120	.	+	0	ID=cds-WP_064047176.1;Parent=gene-C9F00_RS13450;Dbxref=GenBank:WP_064047176.1;Name=WP_064047176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9F00_RS13450;product=cobalt-precorrin-8 methylmutase;protein_id=WP_064047176.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	32120	33259	.	+	.	ID=gene-C9F00_RS13455;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9F00_RS13455;old_locus_tag=C9F00_13790
NZ_PYKC01000079.1	Protein Homology	CDS	32120	33259	.	+	0	ID=cds-WP_001292910.1;Parent=gene-C9F00_RS13455;Dbxref=GenBank:WP_001292910.1;Name=WP_001292910.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9F00_RS13455;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292910.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	33253	33858	.	+	.	ID=gene-C9F00_RS13460;Name=C9F00_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13460;old_locus_tag=C9F00_13795
NZ_PYKC01000079.1	Protein Homology	CDS	33253	33858	.	+	0	ID=cds-WP_000958839.1;Parent=gene-C9F00_RS13460;Dbxref=GenBank:WP_000958839.1;Name=WP_000958839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9F00_RS13460;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958839.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	33848	34426	.	+	.	ID=gene-C9F00_RS13465;Name=C9F00_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13465;old_locus_tag=C9F00_13800
NZ_PYKC01000079.1	Protein Homology	CDS	33848	34426	.	+	0	ID=cds-WP_023204216.1;Parent=gene-C9F00_RS13465;Dbxref=GenBank:WP_023204216.1;Name=WP_023204216.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9F00_RS13465;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_023204216.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	34410	35183	.	+	.	ID=gene-C9F00_RS13470;Name=C9F00_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13470;old_locus_tag=C9F00_13805
NZ_PYKC01000079.1	Protein Homology	CDS	34410	35183	.	+	0	ID=cds-WP_048591649.1;Parent=gene-C9F00_RS13470;Dbxref=GenBank:WP_048591649.1;Name=WP_048591649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9F00_RS13470;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_048591649.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	35164	36219	.	+	.	ID=gene-C9F00_RS13475;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9F00_RS13475;old_locus_tag=C9F00_13810
NZ_PYKC01000079.1	Protein Homology	CDS	35164	36219	.	+	0	ID=cds-WP_001098919.1;Parent=gene-C9F00_RS13475;Dbxref=GenBank:WP_001098919.1;Name=WP_001098919.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9F00_RS13475;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098919.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	36219	36944	.	+	.	ID=gene-C9F00_RS13480;Name=C9F00_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13480;old_locus_tag=C9F00_13815
NZ_PYKC01000079.1	Protein Homology	CDS	36219	36944	.	+	0	ID=cds-WP_000953643.1;Parent=gene-C9F00_RS13480;Dbxref=GenBank:WP_000953643.1;Name=WP_000953643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9F00_RS13480;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953643.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	36941	37732	.	+	.	ID=gene-C9F00_RS13485;Name=C9F00_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13485;old_locus_tag=C9F00_13820
NZ_PYKC01000079.1	Protein Homology	CDS	36941	37732	.	+	0	ID=cds-WP_001001982.1;Parent=gene-C9F00_RS13485;Dbxref=GenBank:WP_001001982.1;Name=WP_001001982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9F00_RS13485;product=cobalt-precorrin-6A reductase;protein_id=WP_001001982.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	37735	38529	.	+	.	ID=gene-C9F00_RS13490;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=C9F00_RS13490;old_locus_tag=C9F00_13825
NZ_PYKC01000079.1	Protein Homology	CDS	37735	38529	.	+	0	ID=cds-WP_000709784.1;Parent=gene-C9F00_RS13490;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9F00_RS13490;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	38526	39239	.	+	.	ID=gene-C9F00_RS13495;Name=C9F00_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13495;old_locus_tag=C9F00_13830
NZ_PYKC01000079.1	Protein Homology	CDS	38526	39239	.	+	0	ID=cds-WP_135369614.1;Parent=gene-C9F00_RS13495;Dbxref=GenBank:WP_135369614.1;Name=WP_135369614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9F00_RS13495;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_135369614.1;transl_table=11
NZ_PYKC01000079.1	RefSeq	gene	39236	39717	.	+	.	ID=gene-C9F00_RS13500;Name=cbiM;end_range=39717,.;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9F00_RS13500;old_locus_tag=C9F00_13835;partial=true
NZ_PYKC01000079.1	Protein Homology	CDS	39236	39717	.	+	0	ID=cds-WP_245306390.1;Parent=gene-C9F00_RS13500;Dbxref=GenBank:WP_245306390.1;Name=WP_245306390.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;end_range=39717,.;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F00_RS13500;partial=true;product=cobalt ECF transporter S component CbiM;protein_id=WP_245306390.1;transl_table=11
##sequence-region NZ_PYKC01000015.1 1 38613
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000015.1	RefSeq	region	1	38613	.	+	.	ID=NZ_PYKC01000015.1:1..38613;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000015.1	RefSeq	gene	1	76	.	-	.	ID=gene-C9F00_RS03050;Name=C9F00_RS03050;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS03050;old_locus_tag=C9F00_03105
NZ_PYKC01000015.1	tRNAscan-SE	tRNA	1	76	.	-	.	ID=rna-C9F00_RS03050;Parent=gene-C9F00_RS03050;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03050;product=tRNA-Gly
NZ_PYKC01000015.1	tRNAscan-SE	exon	1	76	.	-	.	ID=exon-C9F00_RS03050-1;Parent=rna-C9F00_RS03050;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03050;product=tRNA-Gly
NZ_PYKC01000015.1	RefSeq	gene	352	1092	.	+	.	ID=gene-C9F00_RS03055;Name=C9F00_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03055;old_locus_tag=C9F00_03110
NZ_PYKC01000015.1	Protein Homology	CDS	352	1092	.	+	0	ID=cds-WP_000727897.1;Parent=gene-C9F00_RS03055;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9F00_RS03055;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	1154	1699	.	-	.	ID=gene-C9F00_RS03060;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9F00_RS03060;old_locus_tag=C9F00_03115
NZ_PYKC01000015.1	Protein Homology	CDS	1154	1699	.	-	0	ID=cds-WP_001271546.1;Parent=gene-C9F00_RS03060;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9F00_RS03060;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	1806	2858	.	+	.	ID=gene-C9F00_RS03065;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9F00_RS03065;old_locus_tag=C9F00_03120
NZ_PYKC01000015.1	Protein Homology	CDS	1806	2858	.	+	0	ID=cds-WP_000041945.1;Parent=gene-C9F00_RS03065;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9F00_RS03065;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	2950	3918	.	+	.	ID=gene-C9F00_RS03070;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F00_RS03070;old_locus_tag=C9F00_03125
NZ_PYKC01000015.1	Protein Homology	CDS	2950	3918	.	+	0	ID=cds-WP_000934956.1;Parent=gene-C9F00_RS03070;Dbxref=GenBank:WP_000934956.1;Name=WP_000934956.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9F00_RS03070;product=archaetidylserine decarboxylase;protein_id=WP_000934956.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	3937	7263	.	+	.	ID=gene-C9F00_RS03075;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9F00_RS03075;old_locus_tag=C9F00_03130
NZ_PYKC01000015.1	Protein Homology	CDS	3937	7263	.	+	0	ID=cds-WP_135369525.1;Parent=gene-C9F00_RS03075;Dbxref=GenBank:WP_135369525.1;Name=WP_135369525.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9F00_RS03075;product=miniconductance mechanosensitive channel MscM;protein_id=WP_135369525.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	7400	7720	.	-	.	ID=gene-C9F00_RS03080;Name=C9F00_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03080;old_locus_tag=C9F00_03135
NZ_PYKC01000015.1	Protein Homology	CDS	7400	7720	.	-	0	ID=cds-WP_001736544.1;Parent=gene-C9F00_RS03080;Dbxref=GenBank:WP_001736544.1;Name=WP_001736544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=C9F00_RS03080;product=hypothetical protein;protein_id=WP_001736544.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	7785	9287	.	-	.	ID=gene-C9F00_RS03085;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9F00_RS03085;old_locus_tag=C9F00_03140
NZ_PYKC01000015.1	Protein Homology	CDS	7785	9287	.	-	0	ID=cds-WP_000149876.1;Parent=gene-C9F00_RS03085;Dbxref=GenBank:WP_000149876.1;Name=WP_000149876.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9F00_RS03085;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149876.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	9513	10490	.	-	.	ID=gene-C9F00_RS03090;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9F00_RS03090;old_locus_tag=C9F00_03145
NZ_PYKC01000015.1	Protein Homology	CDS	9513	10490	.	-	0	ID=cds-WP_000004797.1;Parent=gene-C9F00_RS03090;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9F00_RS03090;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	10813	12603	.	+	.	ID=gene-C9F00_RS03095;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9F00_RS03095;old_locus_tag=C9F00_03150
NZ_PYKC01000015.1	Protein Homology	CDS	10813	12603	.	+	0	ID=cds-WP_001192954.1;Parent=gene-C9F00_RS03095;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9F00_RS03095;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	12596	13330	.	+	.	ID=gene-C9F00_RS03100;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9F00_RS03100;old_locus_tag=C9F00_03155
NZ_PYKC01000015.1	Protein Homology	CDS	12596	13330	.	+	0	ID=cds-WP_000829509.1;Parent=gene-C9F00_RS03100;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9F00_RS03100;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	13341	13736	.	+	.	ID=gene-C9F00_RS03105;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9F00_RS03105;old_locus_tag=C9F00_03160
NZ_PYKC01000015.1	Protein Homology	CDS	13341	13736	.	+	0	ID=cds-WP_000208749.1;Parent=gene-C9F00_RS03105;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9F00_RS03105;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	13747	14106	.	+	.	ID=gene-C9F00_RS03110;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9F00_RS03110;old_locus_tag=C9F00_03165
NZ_PYKC01000015.1	Protein Homology	CDS	13747	14106	.	+	0	ID=cds-WP_000609650.1;Parent=gene-C9F00_RS03110;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9F00_RS03110;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	14217	14750	.	+	.	ID=gene-C9F00_RS03115;Name=C9F00_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03115;old_locus_tag=C9F00_03170
NZ_PYKC01000015.1	Protein Homology	CDS	14217	14750	.	+	0	ID=cds-WP_001221670.1;Parent=gene-C9F00_RS03115;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9F00_RS03115;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	14767	15084	.	-	.	ID=gene-C9F00_RS03120;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9F00_RS03120;old_locus_tag=C9F00_03175
NZ_PYKC01000015.1	Protein Homology	CDS	14767	15084	.	-	0	ID=cds-WP_000118469.1;Parent=gene-C9F00_RS03120;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9F00_RS03120;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	15340	15927	.	+	.	ID=gene-C9F00_RS03125;Name=C9F00_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03125;old_locus_tag=C9F00_03180
NZ_PYKC01000015.1	Protein Homology	CDS	15340	15927	.	+	0	ID=cds-WP_000912959.1;Parent=gene-C9F00_RS03125;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9F00_RS03125;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	15958	16104	.	-	.	ID=gene-C9F00_RS03130;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9F00_RS03130;old_locus_tag=C9F00_03185
NZ_PYKC01000015.1	Protein Homology	CDS	15958	16104	.	-	0	ID=cds-WP_000239598.1;Parent=gene-C9F00_RS03130;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9F00_RS03130;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	16212	16346	.	-	.	ID=gene-C9F00_RS03140;Name=C9F00_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03140;old_locus_tag=C9F00_03195
NZ_PYKC01000015.1	Protein Homology	CDS	16212	16346	.	-	0	ID=cds-WP_000977687.1;Parent=gene-C9F00_RS03140;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9F00_RS03140;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	16407	16973	.	-	.	ID=gene-C9F00_RS03145;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9F00_RS03145;old_locus_tag=C9F00_03200
NZ_PYKC01000015.1	Protein Homology	CDS	16407	16973	.	-	0	ID=cds-WP_000257282.1;Parent=gene-C9F00_RS03145;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9F00_RS03145;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	17014	18042	.	+	.	ID=gene-C9F00_RS03150;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9F00_RS03150;old_locus_tag=C9F00_03205
NZ_PYKC01000015.1	Protein Homology	CDS	17014	18042	.	+	0	ID=cds-WP_079954615.1;Parent=gene-C9F00_RS03150;Dbxref=GenBank:WP_079954615.1;Name=WP_079954615.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9F00_RS03150;product=EF-P beta-lysylation protein EpmB;protein_id=WP_079954615.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	18324	19181	.	+	.	ID=gene-C9F00_RS03155;Name=C9F00_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03155;old_locus_tag=C9F00_03210
NZ_PYKC01000015.1	Protein Homology	CDS	18324	19181	.	+	0	ID=cds-WP_001229225.1;Parent=gene-C9F00_RS03155;Dbxref=GenBank:WP_001229225.1;Name=WP_001229225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9F00_RS03155;product=YjeJ family protein;protein_id=WP_001229225.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	19229	19582	.	-	.	ID=gene-C9F00_RS03160;Name=C9F00_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03160;old_locus_tag=C9F00_03215
NZ_PYKC01000015.1	Protein Homology	CDS	19229	19582	.	-	0	ID=cds-WP_000558210.1;Parent=gene-C9F00_RS03160;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9F00_RS03160;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	19826	21472	.	-	.	ID=gene-C9F00_RS03165;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9F00_RS03165;old_locus_tag=C9F00_03220
NZ_PYKC01000015.1	Protein Homology	CDS	19826	21472	.	-	0	ID=cds-WP_000729126.1;Parent=gene-C9F00_RS03165;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9F00_RS03165;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	21516	21809	.	-	.	ID=gene-C9F00_RS03170;Name=C9F00_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03170;old_locus_tag=C9F00_03225
NZ_PYKC01000015.1	Protein Homology	CDS	21516	21809	.	-	0	ID=cds-WP_000027827.1;Parent=gene-C9F00_RS03170;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9F00_RS03170;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	22085	23326	.	+	.	ID=gene-C9F00_RS03175;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9F00_RS03175;old_locus_tag=C9F00_03230
NZ_PYKC01000015.1	Protein Homology	CDS	22085	23326	.	+	0	ID=cds-WP_135369524.1;Parent=gene-C9F00_RS03175;Dbxref=GenBank:WP_135369524.1;Name=WP_135369524.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9F00_RS03175;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_135369524.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	23385	23861	.	-	.	ID=gene-C9F00_RS03180;Name=C9F00_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03180;old_locus_tag=C9F00_03235
NZ_PYKC01000015.1	Protein Homology	CDS	23385	23861	.	-	0	ID=cds-WP_001267291.1;Parent=gene-C9F00_RS03180;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9F00_RS03180;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	24202	25638	.	+	.	ID=gene-C9F00_RS03185;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9F00_RS03185;old_locus_tag=C9F00_03240
NZ_PYKC01000015.1	Protein Homology	CDS	24202	25638	.	+	0	ID=cds-WP_000069440.1;Parent=gene-C9F00_RS03185;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9F00_RS03185;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	25753	27054	.	+	.	ID=gene-C9F00_RS03190;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9F00_RS03190;old_locus_tag=C9F00_03245
NZ_PYKC01000015.1	Protein Homology	CDS	25753	27054	.	+	0	ID=cds-WP_000637595.1;Parent=gene-C9F00_RS03190;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9F00_RS03190;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	27175	27522	.	+	.	ID=gene-C9F00_RS03195;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9F00_RS03195;old_locus_tag=C9F00_03250
NZ_PYKC01000015.1	Protein Homology	CDS	27175	27522	.	+	0	ID=cds-WP_000887832.1;Parent=gene-C9F00_RS03195;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9F00_RS03195;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	27498	29201	.	+	.	ID=gene-C9F00_RS03200;Name=C9F00_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03200;old_locus_tag=C9F00_03255
NZ_PYKC01000015.1	Protein Homology	CDS	27498	29201	.	+	0	ID=cds-WP_001651309.1;Parent=gene-C9F00_RS03200;Dbxref=GenBank:WP_001651309.1;Name=WP_001651309.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9F00_RS03200;product=protein-disulfide reductase DsbD;protein_id=WP_001651309.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	29238	29813	.	+	.	ID=gene-C9F00_RS03205;Name=C9F00_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03205;old_locus_tag=C9F00_03260
NZ_PYKC01000015.1	Protein Homology	CDS	29238	29813	.	+	0	ID=cds-WP_001188509.1;Parent=gene-C9F00_RS03205;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9F00_RS03205;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	29929	30004	.	+	.	ID=gene-C9F00_RS03210;Name=C9F00_RS03210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS03210;old_locus_tag=C9F00_03265
NZ_PYKC01000015.1	tRNAscan-SE	tRNA	29929	30004	.	+	.	ID=rna-C9F00_RS03210;Parent=gene-C9F00_RS03210;anticodon=(pos:29962..29964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03210;product=tRNA-Phe
NZ_PYKC01000015.1	tRNAscan-SE	exon	29929	30004	.	+	.	ID=exon-C9F00_RS03210-1;Parent=rna-C9F00_RS03210;anticodon=(pos:29962..29964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03210;product=tRNA-Phe
NZ_PYKC01000015.1	RefSeq	pseudogene	30084	30161	.	-	.	ID=gene-C9F00_RS03215;Name=C9F00_RS03215;end_range=30161,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS03215;old_locus_tag=C9F00_03270;partial=true;pseudo=true
NZ_PYKC01000015.1	Protein Homology	CDS	30084	30161	.	-	0	ID=cds-C9F00_RS03215;Parent=gene-C9F00_RS03215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=C9F00_RS03215;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	30715	31467	.	+	.	ID=gene-C9F00_RS03220;Name=C9F00_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03220;old_locus_tag=C9F00_03275
NZ_PYKC01000015.1	Protein Homology	CDS	30715	31467	.	+	0	ID=cds-WP_135369161.1;Parent=gene-C9F00_RS03220;Dbxref=GenBank:WP_135369161.1;Name=WP_135369161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9F00_RS03220;product=non-specific acid phosphatase;protein_id=WP_135369161.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	31599	32447	.	-	.	ID=gene-C9F00_RS03225;Name=C9F00_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03225;old_locus_tag=C9F00_03280
NZ_PYKC01000015.1	Protein Homology	CDS	31599	32447	.	-	0	ID=cds-WP_000175393.1;Parent=gene-C9F00_RS03225;Dbxref=GenBank:WP_000175393.1;Name=WP_000175393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=C9F00_RS03225;product=SdiA-regulated domain-containing protein;protein_id=WP_000175393.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	32473	32619	.	-	.	ID=gene-C9F00_RS24040;Name=C9F00_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24040
NZ_PYKC01000015.1	Protein Homology	CDS	32473	32619	.	-	0	ID=cds-WP_001112365.1;Parent=gene-C9F00_RS24040;Dbxref=GenBank:WP_001112365.1;Name=WP_001112365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112365.1;locus_tag=C9F00_RS24040;product=hypothetical protein;protein_id=WP_001112365.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	32896	33108	.	-	.	ID=gene-C9F00_RS03230;Name=C9F00_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03230;old_locus_tag=C9F00_03285
NZ_PYKC01000015.1	Protein Homology	CDS	32896	33108	.	-	0	ID=cds-WP_135492114.1;Parent=gene-C9F00_RS03230;Dbxref=GenBank:WP_135492114.1;Name=WP_135492114.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063792.1;locus_tag=C9F00_RS03230;product=FaeA/PapI family transcriptional regulator;protein_id=WP_135492114.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	33181	33753	.	-	.	ID=gene-C9F00_RS03235;Name=C9F00_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03235;old_locus_tag=C9F00_03290
NZ_PYKC01000015.1	Protein Homology	CDS	33181	33753	.	-	0	ID=cds-WP_000091128.1;Parent=gene-C9F00_RS03235;Dbxref=GenBank:WP_000091128.1;Name=WP_000091128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091127.1;locus_tag=C9F00_RS03235;product=hypothetical protein;protein_id=WP_000091128.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	33808	34467	.	-	.	ID=gene-C9F00_RS03240;Name=C9F00_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03240;old_locus_tag=C9F00_03295
NZ_PYKC01000015.1	Protein Homology	CDS	33808	34467	.	-	0	ID=cds-WP_023231668.1;Parent=gene-C9F00_RS03240;Dbxref=GenBank:WP_023231668.1;Name=WP_023231668.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=C9F00_RS03240;product=DsbA family protein;protein_id=WP_023231668.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	34648	35115	.	-	.	ID=gene-C9F00_RS03245;Name=C9F00_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03245;old_locus_tag=C9F00_03300
NZ_PYKC01000015.1	Protein Homology	CDS	34648	35115	.	-	0	ID=cds-WP_023231669.1;Parent=gene-C9F00_RS03245;Dbxref=GenBank:WP_023231669.1;Name=WP_023231669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750458.1;locus_tag=C9F00_RS03245;product=hypothetical protein;protein_id=WP_023231669.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	35815	36252	.	-	.	ID=gene-C9F00_RS03250;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9F00_RS03250;old_locus_tag=C9F00_03305
NZ_PYKC01000015.1	Protein Homology	CDS	35815	36252	.	-	0	ID=cds-WP_000191852.1;Parent=gene-C9F00_RS03250;Dbxref=GenBank:WP_000191852.1;Name=WP_000191852.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191852.1;locus_tag=C9F00_RS03250;product=AfaD family invasin;protein_id=WP_000191852.1;transl_table=11
NZ_PYKC01000015.1	RefSeq	gene	36272	38509	.	-	.	ID=gene-C9F00_RS03255;Name=C9F00_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03255;old_locus_tag=C9F00_03310
NZ_PYKC01000015.1	Protein Homology	CDS	36272	38509	.	-	0	ID=cds-WP_348628818.1;Parent=gene-C9F00_RS03255;Dbxref=GenBank:WP_348628818.1;Name=WP_348628818.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=C9F00_RS03255;product=fimbria/pilus outer membrane usher protein;protein_id=WP_348628818.1;transl_table=11
##sequence-region NZ_PYKC01000022.1 1 38370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000022.1	RefSeq	region	1	38370	.	+	.	ID=NZ_PYKC01000022.1:1..38370;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000022.1	RefSeq	gene	1	1846	.	+	.	ID=gene-C9F00_RS04295;Name=C9F00_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04295;old_locus_tag=C9F00_04365;partial=true;start_range=.,1
NZ_PYKC01000022.1	Protein Homology	CDS	1	1846	.	+	1	ID=cds-WP_432430748.1;Parent=gene-C9F00_RS04295;Dbxref=GenBank:WP_432430748.1;Name=WP_432430748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9F00_RS04295;partial=true;product=BapA/Bap/LapF family large adhesin;protein_id=WP_432430748.1;start_range=.,1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	1911	3320	.	+	.	ID=gene-C9F00_RS04300;Name=C9F00_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04300;old_locus_tag=C9F00_04370
NZ_PYKC01000022.1	Protein Homology	CDS	1911	3320	.	+	0	ID=cds-WP_000533856.1;Parent=gene-C9F00_RS04300;Dbxref=GenBank:WP_000533856.1;Name=WP_000533856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9F00_RS04300;product=TolC family outer membrane protein;protein_id=WP_000533856.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	3317	5497	.	+	.	ID=gene-C9F00_RS04305;Name=C9F00_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04305;old_locus_tag=C9F00_04375
NZ_PYKC01000022.1	Protein Homology	CDS	3317	5497	.	+	0	ID=cds-WP_135369051.1;Parent=gene-C9F00_RS04305;Dbxref=GenBank:WP_135369051.1;Name=WP_135369051.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9F00_RS04305;product=type I secretion system permease/ATPase;protein_id=WP_135369051.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	5505	6668	.	+	.	ID=gene-C9F00_RS04310;Name=C9F00_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04310;old_locus_tag=C9F00_04380
NZ_PYKC01000022.1	Protein Homology	CDS	5505	6668	.	+	0	ID=cds-WP_135492141.1;Parent=gene-C9F00_RS04310;Dbxref=GenBank:WP_135492141.1;Name=WP_135492141.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9F00_RS04310;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_135492141.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	6740	7102	.	+	.	ID=gene-C9F00_RS04315;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9F00_RS04315;old_locus_tag=C9F00_04385
NZ_PYKC01000022.1	cmsearch	tmRNA	6740	7102	.	+	.	ID=rna-C9F00_RS04315;Parent=gene-C9F00_RS04315;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS04315;product=transfer-messenger RNA
NZ_PYKC01000022.1	cmsearch	exon	6740	7102	.	+	.	ID=exon-C9F00_RS04315-1;Parent=rna-C9F00_RS04315;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS04315;product=transfer-messenger RNA
NZ_PYKC01000022.1	RefSeq	gene	7284	8525	.	+	.	ID=gene-C9F00_RS04320;Name=C9F00_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04320;old_locus_tag=C9F00_04390
NZ_PYKC01000022.1	Protein Homology	CDS	7284	8525	.	+	0	ID=cds-WP_135369052.1;Parent=gene-C9F00_RS04320;Dbxref=GenBank:WP_135369052.1;Name=WP_135369052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=C9F00_RS04320;product=integrase;protein_id=WP_135369052.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	8571	9434	.	-	.	ID=gene-C9F00_RS04325;Name=C9F00_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04325;old_locus_tag=C9F00_04395
NZ_PYKC01000022.1	GeneMarkS-2+	CDS	8571	9434	.	-	0	ID=cds-WP_135369053.1;Parent=gene-C9F00_RS04325;Dbxref=GenBank:WP_135369053.1;Name=WP_135369053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS04325;product=hypothetical protein;protein_id=WP_135369053.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	9549	9758	.	+	.	ID=gene-C9F00_RS04330;Name=C9F00_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04330;old_locus_tag=C9F00_04400
NZ_PYKC01000022.1	Protein Homology	CDS	9549	9758	.	+	0	ID=cds-WP_135369054.1;Parent=gene-C9F00_RS04330;Dbxref=GenBank:WP_135369054.1;Name=WP_135369054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246231.1;locus_tag=C9F00_RS04330;product=AlpA family phage regulatory protein;protein_id=WP_135369054.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	9946	11460	.	+	.	ID=gene-C9F00_RS04335;Name=C9F00_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04335;old_locus_tag=C9F00_04405
NZ_PYKC01000022.1	Protein Homology	CDS	9946	11460	.	+	0	ID=cds-WP_135369055.1;Parent=gene-C9F00_RS04335;Dbxref=GenBank:WP_135369055.1;Name=WP_135369055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923662.1;locus_tag=C9F00_RS04335;product=YfjI family protein;protein_id=WP_135369055.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	11694	12314	.	+	.	ID=gene-C9F00_RS04340;Name=C9F00_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04340;old_locus_tag=C9F00_04410
NZ_PYKC01000022.1	Protein Homology	CDS	11694	12314	.	+	0	ID=cds-WP_135369030.1;Parent=gene-C9F00_RS04340;Dbxref=GenBank:WP_135369030.1;Name=WP_135369030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861012.1;locus_tag=C9F00_RS04340;product=inovirus Gp2 family protein;protein_id=WP_135369030.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	12544	13932	.	-	.	ID=gene-C9F00_RS04345;Name=C9F00_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04345;old_locus_tag=C9F00_04415
NZ_PYKC01000022.1	Protein Homology	CDS	12544	13932	.	-	0	ID=cds-WP_240776468.1;Parent=gene-C9F00_RS04345;Dbxref=GenBank:WP_240776468.1;Name=WP_240776468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=C9F00_RS04345;product=AAA family ATPase;protein_id=WP_240776468.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	14383	15072	.	+	.	ID=gene-C9F00_RS04350;Name=C9F00_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04350;old_locus_tag=C9F00_04420
NZ_PYKC01000022.1	Protein Homology	CDS	14383	15072	.	+	0	ID=cds-WP_135369032.1;Parent=gene-C9F00_RS04350;Dbxref=GenBank:WP_135369032.1;Name=WP_135369032.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686258.1;locus_tag=C9F00_RS04350;product=haloacid dehalogenase type II;protein_id=WP_135369032.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	pseudogene	15126	15449	.	-	.	ID=gene-C9F00_RS24325;Name=C9F00_RS24325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24325;partial=true;pseudo=true;start_range=.,15126
NZ_PYKC01000022.1	Protein Homology	CDS	15126	15449	.	-	0	ID=cds-C9F00_RS24325;Parent=gene-C9F00_RS24325;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=C9F00_RS24325;partial=true;product=integrase;pseudo=true;start_range=.,15126;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	15787	17619	.	+	.	ID=gene-C9F00_RS04360;Name=C9F00_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04360;old_locus_tag=C9F00_04430
NZ_PYKC01000022.1	Protein Homology	CDS	15787	17619	.	+	0	ID=cds-WP_167850431.1;Parent=gene-C9F00_RS04360;Dbxref=GenBank:WP_167850431.1;Name=WP_167850431.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017539.6;locus_tag=C9F00_RS04360;product=NACHT domain-containing protein;protein_id=WP_167850431.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	17900	18688	.	-	.	ID=gene-C9F00_RS04365;Name=C9F00_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04365;old_locus_tag=C9F00_04435
NZ_PYKC01000022.1	Protein Homology	CDS	17900	18688	.	-	0	ID=cds-WP_135420341.1;Parent=gene-C9F00_RS04365;Dbxref=GenBank:WP_135420341.1;Name=WP_135420341.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=C9F00_RS04365;product=class I SAM-dependent methyltransferase;protein_id=WP_135420341.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	18761	19321	.	-	.	ID=gene-C9F00_RS04370;Name=C9F00_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04370;old_locus_tag=C9F00_04440
NZ_PYKC01000022.1	Protein Homology	CDS	18761	19321	.	-	0	ID=cds-WP_135420342.1;Parent=gene-C9F00_RS04370;Dbxref=GenBank:WP_135420342.1;Name=WP_135420342.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804994.1;locus_tag=C9F00_RS04370;product=GNAT family N-acetyltransferase;protein_id=WP_135420342.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	19401	20198	.	-	.	ID=gene-C9F00_RS04375;Name=C9F00_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04375;old_locus_tag=C9F00_04445
NZ_PYKC01000022.1	Protein Homology	CDS	19401	20198	.	-	0	ID=cds-WP_135420343.1;Parent=gene-C9F00_RS04375;Dbxref=GenBank:WP_135420343.1;Name=WP_135420343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9F00_RS04375;product=MBL fold metallo-hydrolase;protein_id=WP_135420343.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	20461	21381	.	+	.	ID=gene-C9F00_RS04380;Name=C9F00_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04380;old_locus_tag=C9F00_04450
NZ_PYKC01000022.1	Protein Homology	CDS	20461	21381	.	+	0	ID=cds-WP_135420347.1;Parent=gene-C9F00_RS04380;Dbxref=GenBank:WP_135420347.1;Name=WP_135420347.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149848.1;locus_tag=C9F00_RS04380;product=DMT family transporter;protein_id=WP_135420347.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	21524	21817	.	+	.	ID=gene-C9F00_RS04385;Name=C9F00_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04385;old_locus_tag=C9F00_04455
NZ_PYKC01000022.1	Protein Homology	CDS	21524	21817	.	+	0	ID=cds-WP_135420344.1;Parent=gene-C9F00_RS04385;Dbxref=GenBank:WP_135420344.1;Name=WP_135420344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228674.1;locus_tag=C9F00_RS04385;product=YciI family protein;protein_id=WP_135420344.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	21913	22548	.	-	.	ID=gene-C9F00_RS04390;Name=C9F00_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04390;old_locus_tag=C9F00_04460
NZ_PYKC01000022.1	Protein Homology	CDS	21913	22548	.	-	0	ID=cds-WP_135369469.1;Parent=gene-C9F00_RS04390;Dbxref=GenBank:WP_135369469.1;Name=WP_135369469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366922.1;locus_tag=C9F00_RS04390;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_135369469.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	23114	23419	.	+	.	ID=gene-C9F00_RS04395;Name=C9F00_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04395;old_locus_tag=C9F00_04465
NZ_PYKC01000022.1	GeneMarkS-2+	CDS	23114	23419	.	+	0	ID=cds-WP_135369468.1;Parent=gene-C9F00_RS04395;Dbxref=GenBank:WP_135369468.1;Name=WP_135369468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS04395;product=hypothetical protein;protein_id=WP_135369468.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	23773	24486	.	+	.	ID=gene-C9F00_RS04400;Name=C9F00_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04400;old_locus_tag=C9F00_04470
NZ_PYKC01000022.1	Protein Homology	CDS	23773	24486	.	+	0	ID=cds-WP_135369467.1;Parent=gene-C9F00_RS04400;Dbxref=GenBank:WP_135369467.1;Name=WP_135369467.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083853.1;locus_tag=C9F00_RS04400;product=helix-turn-helix transcriptional regulator;protein_id=WP_135369467.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	24559	24705	.	+	.	ID=gene-C9F00_RS24060;Name=C9F00_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24060
NZ_PYKC01000022.1	Protein Homology	CDS	24559	24705	.	+	0	ID=cds-WP_023892166.1;Parent=gene-C9F00_RS24060;Dbxref=GenBank:WP_023892166.1;Name=WP_023892166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383016.1;locus_tag=C9F00_RS24060;product=hypothetical protein;protein_id=WP_023892166.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	24722	24925	.	+	.	ID=gene-C9F00_RS04405;Name=C9F00_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04405;old_locus_tag=C9F00_04475
NZ_PYKC01000022.1	Protein Homology	CDS	24722	24925	.	+	0	ID=cds-WP_135369466.1;Parent=gene-C9F00_RS04405;Dbxref=GenBank:WP_135369466.1;Name=WP_135369466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585291.1;locus_tag=C9F00_RS04405;product=transposase;protein_id=WP_135369466.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	24991	25935	.	+	.	ID=gene-C9F00_RS04410;Name=C9F00_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04410;old_locus_tag=C9F00_04480
NZ_PYKC01000022.1	Protein Homology	CDS	24991	25935	.	+	0	ID=cds-WP_240776469.1;Parent=gene-C9F00_RS04410;Dbxref=GenBank:WP_240776469.1;Name=WP_240776469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480477.1;locus_tag=C9F00_RS04410;product=Ivy family c-type lysozyme inhibitor;protein_id=WP_240776469.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	26010	26243	.	+	.	ID=gene-C9F00_RS04415;Name=C9F00_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04415;old_locus_tag=C9F00_04485
NZ_PYKC01000022.1	Protein Homology	CDS	26010	26243	.	+	0	ID=cds-WP_135369465.1;Parent=gene-C9F00_RS04415;Dbxref=GenBank:WP_135369465.1;Name=WP_135369465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194654.1;locus_tag=C9F00_RS04415;product=DUF905 domain-containing protein;protein_id=WP_135369465.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	26240	26470	.	+	.	ID=gene-C9F00_RS04420;Name=C9F00_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04420;old_locus_tag=C9F00_04490
NZ_PYKC01000022.1	GeneMarkS-2+	CDS	26240	26470	.	+	0	ID=cds-WP_135369464.1;Parent=gene-C9F00_RS04420;Dbxref=GenBank:WP_135369464.1;Name=WP_135369464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS04420;product=hypothetical protein;protein_id=WP_135369464.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	26579	27397	.	+	.	ID=gene-C9F00_RS04425;Name=C9F00_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04425;old_locus_tag=C9F00_04495
NZ_PYKC01000022.1	Protein Homology	CDS	26579	27397	.	+	0	ID=cds-WP_135369463.1;Parent=gene-C9F00_RS04425;Dbxref=GenBank:WP_135369463.1;Name=WP_135369463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=C9F00_RS04425;product=DUF932 domain-containing protein;protein_id=WP_135369463.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	27466	27933	.	+	.	ID=gene-C9F00_RS04430;Name=C9F00_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04430;old_locus_tag=C9F00_04500
NZ_PYKC01000022.1	Protein Homology	CDS	27466	27933	.	+	0	ID=cds-WP_135369462.1;Parent=gene-C9F00_RS04430;Dbxref=GenBank:WP_135369462.1;Name=WP_135369462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239282.1;locus_tag=C9F00_RS04430;product=antirestriction protein;protein_id=WP_135369462.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	27945	28448	.	+	.	ID=gene-C9F00_RS04435;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9F00_RS04435;old_locus_tag=C9F00_04505
NZ_PYKC01000022.1	Protein Homology	CDS	27945	28448	.	+	0	ID=cds-WP_135369461.1;Parent=gene-C9F00_RS04435;Dbxref=GenBank:WP_135369461.1;Name=WP_135369461.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=C9F00_RS04435;product=RadC family protein;protein_id=WP_135369461.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	28445	28666	.	+	.	ID=gene-C9F00_RS04440;Name=C9F00_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04440;old_locus_tag=C9F00_04510
NZ_PYKC01000022.1	Protein Homology	CDS	28445	28666	.	+	0	ID=cds-WP_135369460.1;Parent=gene-C9F00_RS04440;Dbxref=GenBank:WP_135369460.1;Name=WP_135369460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246875.1;locus_tag=C9F00_RS04440;product=DUF987 family protein;protein_id=WP_135369460.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	28699	29040	.	+	.	ID=gene-C9F00_RS04445;Name=C9F00_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04445;old_locus_tag=C9F00_04515
NZ_PYKC01000022.1	Protein Homology	CDS	28699	29040	.	+	0	ID=cds-WP_135369459.1;Parent=gene-C9F00_RS04445;Dbxref=GenBank:WP_135369459.1;Name=WP_135369459.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380486.1;locus_tag=C9F00_RS04445;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_135369459.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	29083	29424	.	+	.	ID=gene-C9F00_RS04450;Name=C9F00_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04450;old_locus_tag=C9F00_04520
NZ_PYKC01000022.1	Protein Homology	CDS	29083	29424	.	+	0	ID=cds-WP_135369458.1;Parent=gene-C9F00_RS04450;Dbxref=GenBank:WP_135369458.1;Name=WP_135369458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194750.1;locus_tag=C9F00_RS04450;product=TA system toxin CbtA family protein;protein_id=WP_135369458.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	29540	30382	.	+	.	ID=gene-C9F00_RS04455;Name=C9F00_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04455;old_locus_tag=C9F00_04525
NZ_PYKC01000022.1	Protein Homology	CDS	29540	30382	.	+	0	ID=cds-WP_186799053.1;Parent=gene-C9F00_RS04455;Dbxref=GenBank:WP_186799053.1;Name=WP_186799053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=C9F00_RS04455;product=DUF4942 domain-containing protein;protein_id=WP_186799053.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	30632	30850	.	-	.	ID=gene-C9F00_RS04460;Name=C9F00_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04460;old_locus_tag=C9F00_04530
NZ_PYKC01000022.1	Protein Homology	CDS	30632	30850	.	-	0	ID=cds-WP_000980498.1;Parent=gene-C9F00_RS04460;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9F00_RS04460;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	30919	32019	.	-	.	ID=gene-C9F00_RS04465;Name=C9F00_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04465;old_locus_tag=C9F00_04535
NZ_PYKC01000022.1	Protein Homology	CDS	30919	32019	.	-	0	ID=cds-WP_023226826.1;Parent=gene-C9F00_RS04465;Dbxref=GenBank:WP_023226826.1;Name=WP_023226826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F00_RS04465;product=phage late control D family protein;protein_id=WP_023226826.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	32016	32501	.	-	.	ID=gene-C9F00_RS04470;Name=C9F00_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04470;old_locus_tag=C9F00_04540
NZ_PYKC01000022.1	Protein Homology	CDS	32016	32501	.	-	0	ID=cds-WP_135492139.1;Parent=gene-C9F00_RS04470;Dbxref=GenBank:WP_135492139.1;Name=WP_135492139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9F00_RS04470;product=phage tail protein;protein_id=WP_135492139.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	32498	35305	.	-	.	ID=gene-C9F00_RS04475;Name=C9F00_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04475;old_locus_tag=C9F00_04545
NZ_PYKC01000022.1	Protein Homology	CDS	32498	35305	.	-	0	ID=cds-WP_023226825.1;Parent=gene-C9F00_RS04475;Dbxref=GenBank:WP_023226825.1;Name=WP_023226825.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9F00_RS04475;product=phage tail tape measure protein;protein_id=WP_023226825.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	35298	35417	.	-	.	ID=gene-C9F00_RS04480;Name=C9F00_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04480;old_locus_tag=C9F00_04550
NZ_PYKC01000022.1	Protein Homology	CDS	35298	35417	.	-	0	ID=cds-WP_000763317.1;Parent=gene-C9F00_RS04480;Dbxref=GenBank:WP_000763317.1;Name=WP_000763317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9F00_RS04480;product=GpE family phage tail protein;protein_id=WP_000763317.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	35432	35734	.	-	.	ID=gene-C9F00_RS04485;Name=C9F00_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04485;old_locus_tag=C9F00_04555
NZ_PYKC01000022.1	Protein Homology	CDS	35432	35734	.	-	0	ID=cds-WP_001280962.1;Parent=gene-C9F00_RS04485;Dbxref=GenBank:WP_001280962.1;Name=WP_001280962.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9F00_RS04485;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	35789	36304	.	-	.	ID=gene-C9F00_RS04490;Name=C9F00_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04490;old_locus_tag=C9F00_04560
NZ_PYKC01000022.1	Protein Homology	CDS	35789	36304	.	-	0	ID=cds-WP_001207653.1;Parent=gene-C9F00_RS04490;Dbxref=GenBank:WP_001207653.1;Name=WP_001207653.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=C9F00_RS04490;product=phage major tail tube protein;protein_id=WP_001207653.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	36314	37486	.	-	.	ID=gene-C9F00_RS04495;Name=C9F00_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04495;old_locus_tag=C9F00_04565
NZ_PYKC01000022.1	Protein Homology	CDS	36314	37486	.	-	0	ID=cds-WP_094914708.1;Parent=gene-C9F00_RS04495;Dbxref=GenBank:WP_094914708.1;Name=WP_094914708.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9F00_RS04495;product=phage tail sheath protein;protein_id=WP_094914708.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	gene	37617	38144	.	-	.	ID=gene-C9F00_RS04500;Name=C9F00_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04500;old_locus_tag=C9F00_04570
NZ_PYKC01000022.1	Protein Homology	CDS	37617	38144	.	-	0	ID=cds-WP_000680167.1;Parent=gene-C9F00_RS04500;Dbxref=GenBank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=C9F00_RS04500;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11
NZ_PYKC01000022.1	RefSeq	pseudogene	38147	38370	.	-	.	ID=gene-C9F00_RS04505;Name=C9F00_RS04505;end_range=38370,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS04505;old_locus_tag=C9F00_04575;partial=true;pseudo=true
NZ_PYKC01000022.1	Protein Homology	CDS	38147	38370	.	-	2	ID=cds-C9F00_RS04505;Parent=gene-C9F00_RS04505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=38370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F00_RS04505;partial=true;product=phage tail protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000140.1 1 38291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000140.1	RefSeq	region	1	38291	.	+	.	ID=NZ_PYKC01000140.1:1..38291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000140.1	RefSeq	gene	1	691	.	-	.	ID=gene-C9F00_RS21335;Name=C9F00_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21335;old_locus_tag=C9F00_21840;partial=true;start_range=.,1
NZ_PYKC01000140.1	Protein Homology	CDS	1	691	.	-	0	ID=cds-WP_210114165.1;Parent=gene-C9F00_RS21335;Dbxref=GenBank:WP_210114165.1;Name=WP_210114165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9F00_RS21335;partial=true;product=aryl-sulfate sulfotransferase N-terminal domain-containing protein;protein_id=WP_210114165.1;start_range=.,1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	1091	1267	.	+	.	ID=gene-C9F00_RS24655;Name=C9F00_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24655;old_locus_tag=C9F00_21845
NZ_PYKC01000140.1	Protein Homology	CDS	1091	1267	.	+	0	ID=cds-WP_000469259.1;Parent=gene-C9F00_RS24655;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=C9F00_RS24655;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	1334	2107	.	-	.	ID=gene-C9F00_RS21340;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9F00_RS21340;old_locus_tag=C9F00_21850
NZ_PYKC01000140.1	Protein Homology	CDS	1334	2107	.	-	0	ID=cds-WP_000115874.1;Parent=gene-C9F00_RS21340;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9F00_RS21340;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	2248	3036	.	+	.	ID=gene-C9F00_RS21345;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9F00_RS21345;old_locus_tag=C9F00_21855
NZ_PYKC01000140.1	Protein Homology	CDS	2248	3036	.	+	0	ID=cds-WP_001520560.1;Parent=gene-C9F00_RS21345;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9F00_RS21345;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	3097	4260	.	-	.	ID=gene-C9F00_RS21350;Name=C9F00_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21350;old_locus_tag=C9F00_21860
NZ_PYKC01000140.1	Protein Homology	CDS	3097	4260	.	-	0	ID=cds-WP_000442833.1;Parent=gene-C9F00_RS21350;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9F00_RS21350;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	4266	4937	.	-	.	ID=gene-C9F00_RS21355;Name=C9F00_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21355;old_locus_tag=C9F00_21865
NZ_PYKC01000140.1	Protein Homology	CDS	4266	4937	.	-	0	ID=cds-WP_000831528.1;Parent=gene-C9F00_RS21355;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9F00_RS21355;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	5150	6625	.	-	.	ID=gene-C9F00_RS21360;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9F00_RS21360;old_locus_tag=C9F00_21875
NZ_PYKC01000140.1	Protein Homology	CDS	5150	6625	.	-	0	ID=cds-WP_072100461.1;Parent=gene-C9F00_RS21360;Dbxref=GenBank:WP_072100461.1;Name=WP_072100461.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9F00_RS21360;product=outer membrane channel protein TolC;protein_id=WP_072100461.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	6826	7458	.	+	.	ID=gene-C9F00_RS21365;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9F00_RS21365;old_locus_tag=C9F00_21880
NZ_PYKC01000140.1	Protein Homology	CDS	6826	7458	.	+	0	ID=cds-WP_001231950.1;Parent=gene-C9F00_RS21365;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9F00_RS21365;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	7455	7877	.	+	.	ID=gene-C9F00_RS21370;Name=C9F00_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21370;old_locus_tag=C9F00_21885
NZ_PYKC01000140.1	Protein Homology	CDS	7455	7877	.	+	0	ID=cds-WP_000833404.1;Parent=gene-C9F00_RS21370;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9F00_RS21370;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	7902	8729	.	+	.	ID=gene-C9F00_RS21375;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9F00_RS21375;old_locus_tag=C9F00_21890
NZ_PYKC01000140.1	Protein Homology	CDS	7902	8729	.	+	0	ID=cds-WP_000444735.1;Parent=gene-C9F00_RS21375;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9F00_RS21375;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	8729	9310	.	+	.	ID=gene-C9F00_RS21380;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9F00_RS21380;old_locus_tag=C9F00_21895
NZ_PYKC01000140.1	Protein Homology	CDS	8729	9310	.	+	0	ID=cds-WP_000105725.1;Parent=gene-C9F00_RS21380;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9F00_RS21380;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	pseudogene	9338	11230	.	+	.	ID=gene-C9F00_RS21385;Name=parE;gbkey=Gene;gene=parE;gene_biotype=pseudogene;locus_tag=C9F00_RS21385;old_locus_tag=C9F00_21900;pseudo=true
NZ_PYKC01000140.1	Protein Homology	CDS	9338	11230	.	+	0	ID=cds-C9F00_RS21385;Parent=gene-C9F00_RS21385;Note=internal stop;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9F00_RS21385;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	11355	11669	.	-	.	ID=gene-C9F00_RS21390;Name=C9F00_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21390;old_locus_tag=C9F00_21905
NZ_PYKC01000140.1	Protein Homology	CDS	11355	11669	.	-	0	ID=cds-WP_000958587.1;Parent=gene-C9F00_RS21390;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9F00_RS21390;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	11701	12282	.	-	.	ID=gene-C9F00_RS21395;Name=C9F00_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21395;old_locus_tag=C9F00_21910
NZ_PYKC01000140.1	Protein Homology	CDS	11701	12282	.	-	0	ID=cds-WP_000065416.1;Parent=gene-C9F00_RS21395;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F00_RS21395;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	12389	13738	.	-	.	ID=gene-C9F00_RS21400;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9F00_RS21400;old_locus_tag=C9F00_21915
NZ_PYKC01000140.1	Protein Homology	CDS	12389	13738	.	-	0	ID=cds-WP_000779328.1;Parent=gene-C9F00_RS21400;Dbxref=GenBank:WP_000779328.1;Name=WP_000779328.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9F00_RS21400;product=quorum sensing histidine kinase QseC;protein_id=WP_000779328.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	13735	14394	.	-	.	ID=gene-C9F00_RS21405;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9F00_RS21405;old_locus_tag=C9F00_21920
NZ_PYKC01000140.1	Protein Homology	CDS	13735	14394	.	-	0	ID=cds-WP_001221574.1;Parent=gene-C9F00_RS21405;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9F00_RS21405;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	14550	14942	.	+	.	ID=gene-C9F00_RS21410;Name=C9F00_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21410;old_locus_tag=C9F00_21925
NZ_PYKC01000140.1	Protein Homology	CDS	14550	14942	.	+	0	ID=cds-WP_000731552.1;Parent=gene-C9F00_RS21410;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9F00_RS21410;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	15014	15880	.	+	.	ID=gene-C9F00_RS21415;Name=C9F00_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21415;old_locus_tag=C9F00_21930
NZ_PYKC01000140.1	Protein Homology	CDS	15014	15880	.	+	0	ID=cds-WP_000998795.1;Parent=gene-C9F00_RS21415;Dbxref=GenBank:WP_000998795.1;Name=WP_000998795.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9F00_RS21415;product=AraC family transcriptional regulator;protein_id=WP_000998795.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	15991	18249	.	+	.	ID=gene-C9F00_RS21420;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9F00_RS21420;old_locus_tag=C9F00_21935
NZ_PYKC01000140.1	Protein Homology	CDS	15991	18249	.	+	0	ID=cds-WP_001281855.1;Parent=gene-C9F00_RS21420;Dbxref=GenBank:WP_001281855.1;Name=WP_001281855.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9F00_RS21420;product=DNA topoisomerase IV subunit A;protein_id=WP_001281855.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	18506	19243	.	+	.	ID=gene-C9F00_RS21425;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9F00_RS21425;old_locus_tag=C9F00_21940
NZ_PYKC01000140.1	Protein Homology	CDS	18506	19243	.	+	0	ID=cds-WP_000965730.1;Parent=gene-C9F00_RS21425;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9F00_RS21425;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	19317	20729	.	+	.	ID=gene-C9F00_RS21430;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9F00_RS21430;old_locus_tag=C9F00_21945
NZ_PYKC01000140.1	Protein Homology	CDS	19317	20729	.	+	0	ID=cds-WP_000010658.1;Parent=gene-C9F00_RS21430;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9F00_RS21430;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	20774	22081	.	-	.	ID=gene-C9F00_RS21435;Name=C9F00_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21435;old_locus_tag=C9F00_21950
NZ_PYKC01000140.1	Protein Homology	CDS	20774	22081	.	-	0	ID=cds-WP_135369101.1;Parent=gene-C9F00_RS21435;Dbxref=GenBank:WP_135369101.1;Name=WP_135369101.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9F00_RS21435;product=TRAP transporter large permease;protein_id=WP_135369101.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	22092	22574	.	-	.	ID=gene-C9F00_RS21440;Name=C9F00_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21440;old_locus_tag=C9F00_21955
NZ_PYKC01000140.1	Protein Homology	CDS	22092	22574	.	-	0	ID=cds-WP_001221828.1;Parent=gene-C9F00_RS21440;Dbxref=GenBank:WP_001221828.1;Name=WP_001221828.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9F00_RS21440;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	22616	23599	.	-	.	ID=gene-C9F00_RS21445;Name=C9F00_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21445;old_locus_tag=C9F00_21960
NZ_PYKC01000140.1	Protein Homology	CDS	22616	23599	.	-	0	ID=cds-WP_135492504.1;Parent=gene-C9F00_RS21445;Dbxref=GenBank:WP_135492504.1;Name=WP_135492504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9F00_RS21445;product=TRAP transporter substrate-binding protein;protein_id=WP_135492504.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	24088	26259	.	+	.	ID=gene-C9F00_RS21450;Name=C9F00_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21450;old_locus_tag=C9F00_21965
NZ_PYKC01000140.1	Protein Homology	CDS	24088	26259	.	+	0	ID=cds-WP_135369102.1;Parent=gene-C9F00_RS21450;Dbxref=GenBank:WP_135369102.1;Name=WP_135369102.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9F00_RS21450;product=YgiQ family radical SAM protein;protein_id=WP_135369102.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	26462	26656	.	+	.	ID=gene-C9F00_RS21455;Name=C9F00_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21455;old_locus_tag=C9F00_21970
NZ_PYKC01000140.1	GeneMarkS-2+	CDS	26462	26656	.	+	0	ID=cds-WP_000525382.1;Parent=gene-C9F00_RS21455;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS21455;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	26814	27269	.	-	.	ID=gene-C9F00_RS21465;Name=C9F00_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21465;old_locus_tag=C9F00_21975
NZ_PYKC01000140.1	Protein Homology	CDS	26814	27269	.	-	0	ID=cds-WP_000128242.1;Parent=gene-C9F00_RS21465;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9F00_RS21465;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	pseudogene	27314	28799	.	-	.	ID=gene-C9F00_RS21470;Name=C9F00_RS21470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS21470;old_locus_tag=C9F00_21980;pseudo=true
NZ_PYKC01000140.1	Protein Homology	CDS	27314	28799	.	-	0	ID=cds-C9F00_RS21470;Parent=gene-C9F00_RS21470;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9F00_RS21470;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	28965	29792	.	-	.	ID=gene-C9F00_RS21475;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9F00_RS21475;old_locus_tag=C9F00_21985
NZ_PYKC01000140.1	Protein Homology	CDS	28965	29792	.	-	0	ID=cds-WP_023203797.1;Parent=gene-C9F00_RS21475;Dbxref=GenBank:WP_023203797.1;Name=WP_023203797.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9F00_RS21475;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_023203797.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	29898	31061	.	-	.	ID=gene-C9F00_RS21480;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9F00_RS21480;old_locus_tag=C9F00_21990
NZ_PYKC01000140.1	Protein Homology	CDS	29898	31061	.	-	0	ID=cds-WP_001058720.1;Parent=gene-C9F00_RS21480;Dbxref=GenBank:WP_001058720.1;Name=WP_001058720.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9F00_RS21480;product=alcohol dehydrogenase;protein_id=WP_001058720.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	31254	32153	.	+	.	ID=gene-C9F00_RS21485;Name=C9F00_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21485;old_locus_tag=C9F00_21995
NZ_PYKC01000140.1	Protein Homology	CDS	31254	32153	.	+	0	ID=cds-WP_001078198.1;Parent=gene-C9F00_RS21485;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9F00_RS21485;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	32217	32876	.	-	.	ID=gene-C9F00_RS21490;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=C9F00_RS21490;old_locus_tag=C9F00_22000
NZ_PYKC01000140.1	Protein Homology	CDS	32217	32876	.	-	0	ID=cds-WP_000268444.1;Parent=gene-C9F00_RS21490;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9F00_RS21490;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	33016	34203	.	-	.	ID=gene-C9F00_RS21495;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9F00_RS21495;old_locus_tag=C9F00_22005
NZ_PYKC01000140.1	Protein Homology	CDS	33016	34203	.	-	0	ID=cds-WP_000130270.1;Parent=gene-C9F00_RS21495;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9F00_RS21495;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	34455	35189	.	+	.	ID=gene-C9F00_RS21500;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9F00_RS21500;old_locus_tag=C9F00_22015
NZ_PYKC01000140.1	Protein Homology	CDS	34455	35189	.	+	0	ID=cds-WP_000527859.1;Parent=gene-C9F00_RS21500;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9F00_RS21500;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	35196	35621	.	+	.	ID=gene-C9F00_RS21505;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9F00_RS21505;old_locus_tag=C9F00_22020
NZ_PYKC01000140.1	Protein Homology	CDS	35196	35621	.	+	0	ID=cds-WP_001251476.1;Parent=gene-C9F00_RS21505;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9F00_RS21505;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	35734	36618	.	-	.	ID=gene-C9F00_RS21510;Name=C9F00_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21510;old_locus_tag=C9F00_22025
NZ_PYKC01000140.1	Protein Homology	CDS	35734	36618	.	-	0	ID=cds-WP_000019032.1;Parent=gene-C9F00_RS21510;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9F00_RS21510;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	36742	37146	.	-	.	ID=gene-C9F00_RS21515;Name=C9F00_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21515;old_locus_tag=C9F00_22030
NZ_PYKC01000140.1	Protein Homology	CDS	36742	37146	.	-	0	ID=cds-WP_021294050.1;Parent=gene-C9F00_RS21515;Dbxref=GenBank:WP_021294050.1;Name=WP_021294050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9F00_RS21515;product=hypothetical protein;protein_id=WP_021294050.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	37133	37543	.	-	.	ID=gene-C9F00_RS21520;Name=C9F00_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21520;old_locus_tag=C9F00_22035
NZ_PYKC01000140.1	Protein Homology	CDS	37133	37543	.	-	0	ID=cds-WP_023221306.1;Parent=gene-C9F00_RS21520;Dbxref=GenBank:WP_023221306.1;Name=WP_023221306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9F00_RS21520;product=hypothetical protein;protein_id=WP_023221306.1;transl_table=11
NZ_PYKC01000140.1	RefSeq	gene	37647	38150	.	+	.	ID=gene-C9F00_RS21525;Name=C9F00_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21525;old_locus_tag=C9F00_22040
NZ_PYKC01000140.1	Protein Homology	CDS	37647	38150	.	+	0	ID=cds-WP_001650708.1;Parent=gene-C9F00_RS21525;Dbxref=GenBank:WP_001650708.1;Name=WP_001650708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=C9F00_RS21525;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001650708.1;transl_table=11
##sequence-region NZ_PYKC01000102.1 1 38066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000102.1	RefSeq	region	1	38066	.	+	.	ID=NZ_PYKC01000102.1:1..38066;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000102.1	RefSeq	pseudogene	1	6183	.	-	.	ID=gene-C9F00_RS16560;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=C9F00_RS16560;old_locus_tag=C9F00_16960;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000102.1	Protein Homology	CDS	1	6183	.	-	0	ID=cds-C9F00_RS16560;Parent=gene-C9F00_RS16560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F00_RS16560;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	6200	7477	.	-	.	ID=gene-C9F00_RS16565;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=C9F00_RS16565;old_locus_tag=C9F00_16965
NZ_PYKC01000102.1	Protein Homology	CDS	6200	7477	.	-	0	ID=cds-WP_001081935.1;Parent=gene-C9F00_RS16565;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9F00_RS16565;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	7474	8793	.	-	.	ID=gene-C9F00_RS16570;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9F00_RS16570;old_locus_tag=C9F00_16970
NZ_PYKC01000102.1	Protein Homology	CDS	7474	8793	.	-	0	ID=cds-WP_135369219.1;Parent=gene-C9F00_RS16570;Dbxref=GenBank:WP_135369219.1;Name=WP_135369219.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9F00_RS16570;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_135369219.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	8783	10171	.	-	.	ID=gene-C9F00_RS16575;Name=C9F00_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16575;old_locus_tag=C9F00_16975
NZ_PYKC01000102.1	Protein Homology	CDS	8783	10171	.	-	0	ID=cds-WP_135369220.1;Parent=gene-C9F00_RS16575;Dbxref=GenBank:WP_135369220.1;Name=WP_135369220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9F00_RS16575;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_135369220.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	10168	10800	.	-	.	ID=gene-C9F00_RS16580;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9F00_RS16580;old_locus_tag=C9F00_16980
NZ_PYKC01000102.1	Protein Homology	CDS	10168	10800	.	-	0	ID=cds-WP_000389232.1;Parent=gene-C9F00_RS16580;Dbxref=GenBank:WP_000389232.1;Name=WP_000389232.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9F00_RS16580;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389232.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	11840	12370	.	-	.	ID=gene-C9F00_RS16590;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9F00_RS16590;old_locus_tag=C9F00_16990
NZ_PYKC01000102.1	Protein Homology	CDS	11840	12370	.	-	0	ID=cds-WP_000168322.1;Parent=gene-C9F00_RS16590;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9F00_RS16590;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	12618	15443	.	+	.	ID=gene-C9F00_RS16600;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9F00_RS16600;old_locus_tag=C9F00_17000
NZ_PYKC01000102.1	Protein Homology	CDS	12618	15443	.	+	0	ID=cds-WP_135369325.1;Parent=gene-C9F00_RS16600;Dbxref=GenBank:WP_135369325.1;Name=WP_135369325.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9F00_RS16600;product=excinuclease ABC subunit UvrA;protein_id=WP_135369325.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	15575	16030	.	+	.	ID=gene-C9F00_RS16605;Name=C9F00_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16605;old_locus_tag=C9F00_17005
NZ_PYKC01000102.1	Protein Homology	CDS	15575	16030	.	+	0	ID=cds-WP_072104649.1;Parent=gene-C9F00_RS16605;Dbxref=GenBank:WP_072104649.1;Name=WP_072104649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9F00_RS16605;product=hypothetical protein;protein_id=WP_072104649.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	16017	16355	.	+	.	ID=gene-C9F00_RS16610;Name=C9F00_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16610;old_locus_tag=C9F00_17010
NZ_PYKC01000102.1	Protein Homology	CDS	16017	16355	.	+	0	ID=cds-WP_000146590.1;Parent=gene-C9F00_RS16610;Dbxref=GenBank:WP_000146590.1;Name=WP_000146590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9F00_RS16610;product=hypothetical protein;protein_id=WP_000146590.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	16356	16712	.	-	.	ID=gene-C9F00_RS16615;Name=C9F00_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16615;old_locus_tag=C9F00_17015
NZ_PYKC01000102.1	Protein Homology	CDS	16356	16712	.	-	0	ID=cds-WP_000155665.1;Parent=gene-C9F00_RS16615;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9F00_RS16615;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	16715	17131	.	-	.	ID=gene-C9F00_RS16620;Name=C9F00_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16620;old_locus_tag=C9F00_17020
NZ_PYKC01000102.1	Protein Homology	CDS	16715	17131	.	-	0	ID=cds-WP_000270392.1;Parent=gene-C9F00_RS16620;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9F00_RS16620;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	17260	17973	.	-	.	ID=gene-C9F00_RS16625;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9F00_RS16625;old_locus_tag=C9F00_17025
NZ_PYKC01000102.1	Protein Homology	CDS	17260	17973	.	-	0	ID=cds-WP_000724435.1;Parent=gene-C9F00_RS16625;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9F00_RS16625;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	18160	19353	.	-	.	ID=gene-C9F00_RS16630;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9F00_RS16630;old_locus_tag=C9F00_17035
NZ_PYKC01000102.1	Protein Homology	CDS	18160	19353	.	-	0	ID=cds-WP_000486910.1;Parent=gene-C9F00_RS16630;Dbxref=GenBank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9F00_RS16630;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	19539	20618	.	-	.	ID=gene-C9F00_RS16635;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F00_RS16635;old_locus_tag=C9F00_17040
NZ_PYKC01000102.1	Protein Homology	CDS	19539	20618	.	-	0	ID=cds-WP_001147297.1;Parent=gene-C9F00_RS16635;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9F00_RS16635;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	20650	22065	.	-	.	ID=gene-C9F00_RS16640;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9F00_RS16640;old_locus_tag=C9F00_17045
NZ_PYKC01000102.1	Protein Homology	CDS	20650	22065	.	-	0	ID=cds-WP_000918353.1;Parent=gene-C9F00_RS16640;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9F00_RS16640;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	22130	23113	.	+	.	ID=gene-C9F00_RS16645;Name=C9F00_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16645;old_locus_tag=C9F00_17050
NZ_PYKC01000102.1	Protein Homology	CDS	22130	23113	.	+	0	ID=cds-WP_000235550.1;Parent=gene-C9F00_RS16645;Dbxref=GenBank:WP_000235550.1;Name=WP_000235550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9F00_RS16645;product=quinone oxidoreductase;protein_id=WP_000235550.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	23288	23530	.	-	.	ID=gene-C9F00_RS16650;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9F00_RS16650;old_locus_tag=C9F00_17055
NZ_PYKC01000102.1	Protein Homology	CDS	23288	23530	.	-	0	ID=cds-WP_000891417.1;Parent=gene-C9F00_RS16650;Dbxref=GenBank:WP_000891417.1;Name=WP_000891417.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9F00_RS16650;product=envelope stress response protein PspG;protein_id=WP_000891417.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	23698	24696	.	-	.	ID=gene-C9F00_RS16655;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9F00_RS16655;old_locus_tag=C9F00_17060
NZ_PYKC01000102.1	Protein Homology	CDS	23698	24696	.	-	0	ID=cds-WP_001182234.1;Parent=gene-C9F00_RS16655;Dbxref=GenBank:WP_001182234.1;Name=WP_001182234.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9F00_RS16655;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182234.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	24784	26094	.	-	.	ID=gene-C9F00_RS16660;Name=C9F00_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16660;old_locus_tag=C9F00_17065
NZ_PYKC01000102.1	Protein Homology	CDS	24784	26094	.	-	0	ID=cds-WP_001039335.1;Parent=gene-C9F00_RS16660;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9F00_RS16660;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	26341	26856	.	+	.	ID=gene-C9F00_RS16665;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9F00_RS16665;old_locus_tag=C9F00_17070
NZ_PYKC01000102.1	Protein Homology	CDS	26341	26856	.	+	0	ID=cds-WP_000416271.1;Parent=gene-C9F00_RS16665;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9F00_RS16665;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	26956	27165	.	-	.	ID=gene-C9F00_RS16670;Name=C9F00_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16670;old_locus_tag=C9F00_17075
NZ_PYKC01000102.1	Protein Homology	CDS	26956	27165	.	-	0	ID=cds-WP_001030592.1;Parent=gene-C9F00_RS16670;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9F00_RS16670;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	27187	27300	.	-	.	ID=gene-C9F00_RS16675;Name=C9F00_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16675;old_locus_tag=C9F00_17080
NZ_PYKC01000102.1	Protein Homology	CDS	27187	27300	.	-	0	ID=cds-WP_001575282.1;Parent=gene-C9F00_RS16675;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9F00_RS16675;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	27297	28622	.	-	.	ID=gene-C9F00_RS16680;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9F00_RS16680;old_locus_tag=C9F00_17085
NZ_PYKC01000102.1	Protein Homology	CDS	27297	28622	.	-	0	ID=cds-WP_135492398.1;Parent=gene-C9F00_RS16680;Dbxref=GenBank:WP_135492398.1;Name=WP_135492398.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9F00_RS16680;product=MATE family efflux transporter DinF;protein_id=WP_135492398.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	28801	29409	.	-	.	ID=gene-C9F00_RS16685;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9F00_RS16685;old_locus_tag=C9F00_17090
NZ_PYKC01000102.1	Protein Homology	CDS	28801	29409	.	-	0	ID=cds-WP_000646079.1;Parent=gene-C9F00_RS16685;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9F00_RS16685;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	29518	29886	.	-	.	ID=gene-C9F00_RS16690;Name=C9F00_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16690;old_locus_tag=C9F00_17095
NZ_PYKC01000102.1	Protein Homology	CDS	29518	29886	.	-	0	ID=cds-WP_000002902.1;Parent=gene-C9F00_RS16690;Dbxref=GenBank:WP_000002902.1;Name=WP_000002902.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9F00_RS16690;product=diacylglycerol kinase;protein_id=WP_000002902.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	30057	32477	.	+	.	ID=gene-C9F00_RS16695;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=C9F00_RS16695;old_locus_tag=C9F00_17100
NZ_PYKC01000102.1	Protein Homology	CDS	30057	32477	.	+	0	ID=cds-WP_000017360.1;Parent=gene-C9F00_RS16695;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9F00_RS16695;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	32576	33448	.	-	.	ID=gene-C9F00_RS16700;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9F00_RS16700;old_locus_tag=C9F00_17105
NZ_PYKC01000102.1	Protein Homology	CDS	32576	33448	.	-	0	ID=cds-WP_000455249.1;Parent=gene-C9F00_RS16700;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9F00_RS16700;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	33462	33959	.	-	.	ID=gene-C9F00_RS16705;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9F00_RS16705;old_locus_tag=C9F00_17110
NZ_PYKC01000102.1	Protein Homology	CDS	33462	33959	.	-	0	ID=cds-WP_000019230.1;Parent=gene-C9F00_RS16705;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9F00_RS16705;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	34140	35057	.	-	.	ID=gene-C9F00_RS16710;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9F00_RS16710;old_locus_tag=C9F00_17115
NZ_PYKC01000102.1	Protein Homology	CDS	34140	35057	.	-	0	ID=cds-WP_000782497.1;Parent=gene-C9F00_RS16710;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=C9F00_RS16710;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	35221	36579	.	-	.	ID=gene-C9F00_RS16715;Name=C9F00_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16715;old_locus_tag=C9F00_17120
NZ_PYKC01000102.1	Protein Homology	CDS	35221	36579	.	-	0	ID=cds-WP_135369326.1;Parent=gene-C9F00_RS16715;Dbxref=GenBank:WP_135369326.1;Name=WP_135369326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9F00_RS16715;product=maltoporin;protein_id=WP_135369326.1;transl_table=11
NZ_PYKC01000102.1	RefSeq	gene	36668	37777	.	-	.	ID=gene-C9F00_RS16720;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=C9F00_RS16720;old_locus_tag=C9F00_17125
NZ_PYKC01000102.1	Protein Homology	CDS	36668	37777	.	-	0	ID=cds-WP_000179176.1;Parent=gene-C9F00_RS16720;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F00_RS16720;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11
##sequence-region NZ_PYKC01000154.1 1 494
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000154.1	RefSeq	region	1	494	.	+	.	ID=NZ_PYKC01000154.1:1..494;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000154.1	RefSeq	gene	1	494	.	-	.	ID=gene-C9F00_RS22560;Name=C9F00_RS22560;end_range=494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22560;old_locus_tag=C9F00_23095;partial=true;start_range=.,1
NZ_PYKC01000154.1	Protein Homology	CDS	1	494	.	-	0	ID=cds-WP_135492541.1;Parent=gene-C9F00_RS22560;Dbxref=GenBank:WP_135492541.1;Name=WP_135492541.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=494,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F00_RS22560;partial=true;product=amino acid permease;protein_id=WP_135492541.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000127.1 1 492
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000127.1	RefSeq	region	1	492	.	+	.	ID=NZ_PYKC01000127.1:1..492;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000127.1	RefSeq	gene	1	492	.	-	.	ID=gene-C9F00_RS19305;Name=C9F00_RS19305;end_range=492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19305;old_locus_tag=C9F00_19760;partial=true;start_range=.,1
NZ_PYKC01000127.1	Protein Homology	CDS	1	492	.	-	0	ID=cds-WP_135492454.1;Parent=gene-C9F00_RS19305;Dbxref=GenBank:WP_135492454.1;Name=WP_135492454.1;end_range=492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F00_RS19305;partial=true;product=DUF927 domain-containing protein;protein_id=WP_135492454.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000048.1 1 38044
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000048.1	RefSeq	region	1	38044	.	+	.	ID=NZ_PYKC01000048.1:1..38044;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000048.1	RefSeq	gene	78	989	.	-	.	ID=gene-C9F00_RS07895;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9F00_RS07895;old_locus_tag=C9F00_08060
NZ_PYKC01000048.1	Protein Homology	CDS	78	989	.	-	0	ID=cds-WP_001236024.1;Parent=gene-C9F00_RS07895;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9F00_RS07895;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	992	1912	.	-	.	ID=gene-C9F00_RS07900;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9F00_RS07900;old_locus_tag=C9F00_08065
NZ_PYKC01000048.1	Protein Homology	CDS	992	1912	.	-	0	ID=cds-WP_000936067.1;Parent=gene-C9F00_RS07900;Dbxref=GenBank:WP_000936067.1;Name=WP_000936067.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9F00_RS07900;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936067.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	1973	3511	.	-	.	ID=gene-C9F00_RS07905;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9F00_RS07905;old_locus_tag=C9F00_08070
NZ_PYKC01000048.1	Protein Homology	CDS	1973	3511	.	-	0	ID=cds-WP_000191427.1;Parent=gene-C9F00_RS07905;Dbxref=GenBank:WP_000191427.1;Name=WP_000191427.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9F00_RS07905;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191427.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	3544	5415	.	-	.	ID=gene-C9F00_RS07910;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9F00_RS07910;old_locus_tag=C9F00_08075
NZ_PYKC01000048.1	Protein Homology	CDS	3544	5415	.	-	0	ID=cds-WP_001120599.1;Parent=gene-C9F00_RS07910;Dbxref=GenBank:WP_001120599.1;Name=WP_001120599.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9F00_RS07910;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120599.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	5426	6367	.	-	.	ID=gene-C9F00_RS07915;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9F00_RS07915;old_locus_tag=C9F00_08080
NZ_PYKC01000048.1	Protein Homology	CDS	5426	6367	.	-	0	ID=cds-WP_135492239.1;Parent=gene-C9F00_RS07915;Dbxref=GenBank:WP_135492239.1;Name=WP_135492239.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9F00_RS07915;product=beta-aspartyl-peptidase;protein_id=WP_135492239.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	6571	7806	.	+	.	ID=gene-C9F00_RS07920;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9F00_RS07920;old_locus_tag=C9F00_08085
NZ_PYKC01000048.1	Protein Homology	CDS	6571	7806	.	+	0	ID=cds-WP_167850414.1;Parent=gene-C9F00_RS07920;Dbxref=GenBank:WP_167850414.1;Name=WP_167850414.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9F00_RS07920;product=molybdopterin molybdotransferase MoeA;protein_id=WP_167850414.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	7806	8555	.	+	.	ID=gene-C9F00_RS07925;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9F00_RS07925;old_locus_tag=C9F00_08090
NZ_PYKC01000048.1	Protein Homology	CDS	7806	8555	.	+	0	ID=cds-WP_001623292.1;Parent=gene-C9F00_RS07925;Dbxref=GenBank:WP_001623292.1;Name=WP_001623292.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9F00_RS07925;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_001623292.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	8833	9732	.	+	.	ID=gene-C9F00_RS07930;Name=C9F00_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07930;old_locus_tag=C9F00_08095
NZ_PYKC01000048.1	Protein Homology	CDS	8833	9732	.	+	0	ID=cds-WP_135369349.1;Parent=gene-C9F00_RS07930;Dbxref=GenBank:WP_135369349.1;Name=WP_135369349.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9F00_RS07930;product=glycyl-radical enzyme activating protein;protein_id=WP_135369349.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	9738	12170	.	+	.	ID=gene-C9F00_RS07935;Name=C9F00_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07935;old_locus_tag=C9F00_08100
NZ_PYKC01000048.1	Protein Homology	CDS	9738	12170	.	+	0	ID=cds-WP_135369350.1;Parent=gene-C9F00_RS07935;Dbxref=GenBank:WP_135369350.1;Name=WP_135369350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9F00_RS07935;product=glycyl radical protein;protein_id=WP_135369350.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	12248	13057	.	-	.	ID=gene-C9F00_RS07940;Name=C9F00_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07940;old_locus_tag=C9F00_08105
NZ_PYKC01000048.1	Protein Homology	CDS	12248	13057	.	-	0	ID=cds-WP_000217910.1;Parent=gene-C9F00_RS07940;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9F00_RS07940;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	13319	14584	.	+	.	ID=gene-C9F00_RS07945;Name=C9F00_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07945;old_locus_tag=C9F00_08110
NZ_PYKC01000048.1	Protein Homology	CDS	13319	14584	.	+	0	ID=cds-WP_001623289.1;Parent=gene-C9F00_RS07945;Dbxref=GenBank:WP_001623289.1;Name=WP_001623289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9F00_RS07945;product=DUF1479 domain-containing protein;protein_id=WP_001623289.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	pseudogene	14705	14788	.	-	.	ID=gene-C9F00_RS24790;Name=C9F00_RS24790;end_range=14788,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24790;old_locus_tag=C9F00_08115;partial=true;pseudo=true
NZ_PYKC01000048.1	Protein Homology	CDS	14705	14788	.	-	0	ID=cds-C9F00_RS24790;Parent=gene-C9F00_RS24790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=C9F00_RS24790;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000048.1	RefSeq	pseudogene	14779	15507	.	+	.	ID=gene-C9F00_RS07955;Name=C9F00_RS07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS07955;old_locus_tag=C9F00_08125;partial=true;pseudo=true;start_range=.,14779
NZ_PYKC01000048.1	Protein Homology	CDS	14779	15507	.	+	0	ID=cds-C9F00_RS07955;Parent=gene-C9F00_RS07955;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=C9F00_RS07955;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;start_range=.,14779;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	15536	16279	.	-	.	ID=gene-C9F00_RS07960;Name=C9F00_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07960;old_locus_tag=C9F00_08130
NZ_PYKC01000048.1	Protein Homology	CDS	15536	16279	.	-	0	ID=cds-WP_079961633.1;Parent=gene-C9F00_RS07960;Dbxref=GenBank:WP_079961633.1;Name=WP_079961633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=C9F00_RS07960;product=DUF4261 domain-containing protein;protein_id=WP_079961633.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	16679	18271	.	-	.	ID=gene-C9F00_RS07965;Name=C9F00_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07965;old_locus_tag=C9F00_08135
NZ_PYKC01000048.1	Protein Homology	CDS	16679	18271	.	-	0	ID=cds-WP_135420068.1;Parent=gene-C9F00_RS07965;Dbxref=GenBank:WP_135420068.1;Name=WP_135420068.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=C9F00_RS07965;product=ABC-F family ATPase;protein_id=WP_135420068.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	18491	19411	.	+	.	ID=gene-C9F00_RS07970;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9F00_RS07970;old_locus_tag=C9F00_08140
NZ_PYKC01000048.1	Protein Homology	CDS	18491	19411	.	+	0	ID=cds-WP_001056404.1;Parent=gene-C9F00_RS07970;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9F00_RS07970;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	19455	20567	.	-	.	ID=gene-C9F00_RS07975;Name=C9F00_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07975;old_locus_tag=C9F00_08145
NZ_PYKC01000048.1	Protein Homology	CDS	19455	20567	.	-	0	ID=cds-WP_001046521.1;Parent=gene-C9F00_RS07975;Dbxref=GenBank:WP_001046521.1;Name=WP_001046521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=C9F00_RS07975;product=anion transporter;protein_id=WP_001046521.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	20564	21037	.	-	.	ID=gene-C9F00_RS07980;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9F00_RS07980;old_locus_tag=C9F00_08150
NZ_PYKC01000048.1	Protein Homology	CDS	20564	21037	.	-	0	ID=cds-WP_000533542.1;Parent=gene-C9F00_RS07980;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9F00_RS07980;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	21223	21351	.	+	.	ID=gene-C9F00_RS07985;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9F00_RS07985;old_locus_tag=C9F00_08155
NZ_PYKC01000048.1	Protein Homology	CDS	21223	21351	.	+	0	ID=cds-WP_001001755.1;Parent=gene-C9F00_RS07985;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9F00_RS07985;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	21616	23196	.	+	.	ID=gene-C9F00_RS07990;Name=C9F00_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07990;old_locus_tag=C9F00_08160
NZ_PYKC01000048.1	Protein Homology	CDS	21616	23196	.	+	0	ID=cds-WP_135369606.1;Parent=gene-C9F00_RS07990;Dbxref=GenBank:WP_135369606.1;Name=WP_135369606.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9F00_RS07990;product=phosphoethanolamine transferase;protein_id=WP_135369606.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	23259	23774	.	-	.	ID=gene-C9F00_RS07995;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9F00_RS07995;old_locus_tag=C9F00_08165
NZ_PYKC01000048.1	Protein Homology	CDS	23259	23774	.	-	0	ID=cds-WP_000716763.1;Parent=gene-C9F00_RS07995;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9F00_RS07995;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	24128	25015	.	+	.	ID=gene-C9F00_RS08000;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9F00_RS08000;old_locus_tag=C9F00_08170
NZ_PYKC01000048.1	Protein Homology	CDS	24128	25015	.	+	0	ID=cds-WP_058653246.1;Parent=gene-C9F00_RS08000;Dbxref=GenBank:WP_058653246.1;Name=WP_058653246.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9F00_RS08000;product=threonine/homoserine exporter RhtA;protein_id=WP_058653246.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	25318	25821	.	+	.	ID=gene-C9F00_RS08005;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9F00_RS08005;old_locus_tag=C9F00_08175
NZ_PYKC01000048.1	Protein Homology	CDS	25318	25821	.	+	0	ID=cds-WP_000100805.1;Parent=gene-C9F00_RS08005;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9F00_RS08005;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	26298	27044	.	+	.	ID=gene-C9F00_RS08010;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9F00_RS08010;old_locus_tag=C9F00_08180
NZ_PYKC01000048.1	Protein Homology	CDS	26298	27044	.	+	0	ID=cds-WP_000838671.1;Parent=gene-C9F00_RS08010;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9F00_RS08010;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	27188	27847	.	+	.	ID=gene-C9F00_RS08015;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9F00_RS08015;old_locus_tag=C9F00_08185
NZ_PYKC01000048.1	Protein Homology	CDS	27188	27847	.	+	0	ID=cds-WP_001159076.1;Parent=gene-C9F00_RS08015;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F00_RS08015;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	27844	28566	.	+	.	ID=gene-C9F00_RS08020;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9F00_RS08020;old_locus_tag=C9F00_08190
NZ_PYKC01000048.1	Protein Homology	CDS	27844	28566	.	+	0	ID=cds-WP_000569093.1;Parent=gene-C9F00_RS08020;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9F00_RS08020;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	28685	30907	.	+	.	ID=gene-C9F00_RS08025;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9F00_RS08025;old_locus_tag=C9F00_08195
NZ_PYKC01000048.1	Protein Homology	CDS	28685	30907	.	+	0	ID=cds-WP_052931901.1;Parent=gene-C9F00_RS08025;Dbxref=GenBank:WP_052931901.1;Name=WP_052931901.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F00_RS08025;product=mechanosensitive channel protein;protein_id=WP_052931901.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	30904	31830	.	-	.	ID=gene-C9F00_RS08030;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9F00_RS08030;old_locus_tag=C9F00_08200
NZ_PYKC01000048.1	Protein Homology	CDS	30904	31830	.	-	0	ID=cds-WP_001275962.1;Parent=gene-C9F00_RS08030;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9F00_RS08030;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	32035	32301	.	+	.	ID=gene-C9F00_RS08035;Name=C9F00_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08035;old_locus_tag=C9F00_08205
NZ_PYKC01000048.1	Protein Homology	CDS	32035	32301	.	+	0	ID=cds-WP_000146330.1;Parent=gene-C9F00_RS08035;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9F00_RS08035;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	32586	32846	.	+	.	ID=gene-C9F00_RS08040;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9F00_RS08040;old_locus_tag=C9F00_08210
NZ_PYKC01000048.1	Protein Homology	CDS	32586	32846	.	+	0	ID=cds-WP_000849092.1;Parent=gene-C9F00_RS08040;Dbxref=GenBank:WP_000849092.1;Name=WP_000849092.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9F00_RS08040;product=DUF1471 family protein YbiJ;protein_id=WP_000849092.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	33002	33976	.	-	.	ID=gene-C9F00_RS08045;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9F00_RS08045;old_locus_tag=C9F00_08215
NZ_PYKC01000048.1	Protein Homology	CDS	33002	33976	.	-	0	ID=cds-WP_135369515.1;Parent=gene-C9F00_RS08045;Dbxref=GenBank:WP_135369515.1;Name=WP_135369515.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9F00_RS08045;product=DNA-binding protein YbiB;protein_id=WP_135369515.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	34006	36150	.	-	.	ID=gene-C9F00_RS08050;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9F00_RS08050;old_locus_tag=C9F00_08220
NZ_PYKC01000048.1	Protein Homology	CDS	34006	36150	.	-	0	ID=cds-WP_001218630.1;Parent=gene-C9F00_RS08050;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9F00_RS08050;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	36358	37719	.	-	.	ID=gene-C9F00_RS08055;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9F00_RS08055;old_locus_tag=C9F00_08225
NZ_PYKC01000048.1	Protein Homology	CDS	36358	37719	.	-	0	ID=cds-WP_000007065.1;Parent=gene-C9F00_RS08055;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9F00_RS08055;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11
NZ_PYKC01000048.1	RefSeq	gene	37901	38044	.	-	.	ID=gene-C9F00_RS24390;Name=C9F00_RS24390;end_range=38044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24390;partial=true
NZ_PYKC01000048.1	Protein Homology	CDS	37901	38044	.	-	0	ID=cds-WP_165900407.1;Parent=gene-C9F00_RS24390;Dbxref=GenBank:WP_165900407.1;Name=WP_165900407.1;end_range=38044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117485.1;locus_tag=C9F00_RS24390;partial=true;product=hypothetical protein;protein_id=WP_165900407.1;transl_table=11
##sequence-region NZ_PYKC01000005.1 1 94493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000005.1	RefSeq	region	1	94493	.	+	.	ID=NZ_PYKC01000005.1:1..94493;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000005.1	RefSeq	gene	1	424	.	+	.	ID=gene-C9F00_RS01205;Name=C9F00_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01205;old_locus_tag=C9F00_01240;partial=true;start_range=.,1
NZ_PYKC01000005.1	Protein Homology	CDS	1	424	.	+	1	ID=cds-WP_135492087.1;Parent=gene-C9F00_RS01205;Dbxref=GenBank:WP_135492087.1;Name=WP_135492087.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F00_RS01205;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135492087.1;start_range=.,1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	559	2178	.	+	.	ID=gene-C9F00_RS01210;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=C9F00_RS01210;old_locus_tag=C9F00_01245
NZ_PYKC01000005.1	Protein Homology	CDS	559	2178	.	+	0	ID=cds-WP_023194337.1;Parent=gene-C9F00_RS01210;Dbxref=GenBank:WP_023194337.1;Name=WP_023194337.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9F00_RS01210;product=citrate sensor histidine kinase CitA;protein_id=WP_023194337.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	2180	2866	.	+	.	ID=gene-C9F00_RS01215;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=C9F00_RS01215;old_locus_tag=C9F00_01250
NZ_PYKC01000005.1	Protein Homology	CDS	2180	2866	.	+	0	ID=cds-WP_000377406.1;Parent=gene-C9F00_RS01215;Dbxref=GenBank:WP_000377406.1;Name=WP_000377406.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9F00_RS01215;product=citrate response regulator transcription factor CitB;protein_id=WP_000377406.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	2888	3808	.	-	.	ID=gene-C9F00_RS01220;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9F00_RS01220;old_locus_tag=C9F00_01255
NZ_PYKC01000005.1	Protein Homology	CDS	2888	3808	.	-	0	ID=cds-WP_023257308.1;Parent=gene-C9F00_RS01220;Dbxref=GenBank:WP_023257308.1;Name=WP_023257308.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9F00_RS01220;product=ribonucleoside hydrolase RihC;protein_id=WP_023257308.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	3824	5026	.	-	.	ID=gene-C9F00_RS01225;Name=C9F00_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01225;old_locus_tag=C9F00_01260
NZ_PYKC01000005.1	Protein Homology	CDS	3824	5026	.	-	0	ID=cds-WP_135369522.1;Parent=gene-C9F00_RS01225;Dbxref=GenBank:WP_135369522.1;Name=WP_135369522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9F00_RS01225;product=XAC2610-related protein;protein_id=WP_135369522.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	5226	6176	.	-	.	ID=gene-C9F00_RS01230;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9F00_RS01230;old_locus_tag=C9F00_01265
NZ_PYKC01000005.1	Protein Homology	CDS	5226	6176	.	-	0	ID=cds-WP_001166422.1;Parent=gene-C9F00_RS01230;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9F00_RS01230;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	6179	6628	.	-	.	ID=gene-C9F00_RS01235;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9F00_RS01235;old_locus_tag=C9F00_01270
NZ_PYKC01000005.1	Protein Homology	CDS	6179	6628	.	-	0	ID=cds-WP_000047269.1;Parent=gene-C9F00_RS01235;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9F00_RS01235;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	6783	7283	.	-	.	ID=gene-C9F00_RS01240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9F00_RS01240;old_locus_tag=C9F00_01275
NZ_PYKC01000005.1	Protein Homology	CDS	6783	7283	.	-	0	ID=cds-WP_000042739.1;Parent=gene-C9F00_RS01240;Dbxref=GenBank:WP_000042739.1;Name=WP_000042739.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9F00_RS01240;product=signal peptidase II;protein_id=WP_000042739.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	7283	10117	.	-	.	ID=gene-C9F00_RS01245;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9F00_RS01245;old_locus_tag=C9F00_01280
NZ_PYKC01000005.1	Protein Homology	CDS	7283	10117	.	-	0	ID=cds-WP_001674865.1;Parent=gene-C9F00_RS01245;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=C9F00_RS01245;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	10162	11100	.	-	.	ID=gene-C9F00_RS01250;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9F00_RS01250;old_locus_tag=C9F00_01285
NZ_PYKC01000005.1	Protein Homology	CDS	10162	11100	.	-	0	ID=cds-WP_000767311.1;Parent=gene-C9F00_RS01250;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9F00_RS01250;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	11108	11323	.	-	.	ID=gene-C9F00_RS01255;Name=C9F00_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01255;old_locus_tag=C9F00_01290
NZ_PYKC01000005.1	Protein Homology	CDS	11108	11323	.	-	0	ID=cds-WP_001575565.1;Parent=gene-C9F00_RS01255;Dbxref=GenBank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9F00_RS01255;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	11429	11692	.	+	.	ID=gene-C9F00_RS01260;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9F00_RS01260;old_locus_tag=C9F00_01295
NZ_PYKC01000005.1	Protein Homology	CDS	11429	11692	.	+	0	ID=cds-WP_001518655.1;Parent=gene-C9F00_RS01260;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9F00_RS01260;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	12148	13521	.	+	.	ID=gene-C9F00_RS01265;Name=C9F00_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01265;old_locus_tag=C9F00_01300
NZ_PYKC01000005.1	Protein Homology	CDS	12148	13521	.	+	0	ID=cds-WP_000099989.1;Parent=gene-C9F00_RS01265;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9F00_RS01265;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	13561	15600	.	+	.	ID=gene-C9F00_RS01270;Name=C9F00_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01270;old_locus_tag=C9F00_01305
NZ_PYKC01000005.1	Protein Homology	CDS	13561	15600	.	+	0	ID=cds-WP_135369521.1;Parent=gene-C9F00_RS01270;Dbxref=GenBank:WP_135369521.1;Name=WP_135369521.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9F00_RS01270;product=glycoside hydrolase family 31 protein;protein_id=WP_135369521.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	15655	16554	.	-	.	ID=gene-C9F00_RS01275;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9F00_RS01275;old_locus_tag=C9F00_01310
NZ_PYKC01000005.1	Protein Homology	CDS	15655	16554	.	-	0	ID=cds-WP_000062872.1;Parent=gene-C9F00_RS01275;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9F00_RS01275;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	16616	17782	.	-	.	ID=gene-C9F00_RS01280;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9F00_RS01280;old_locus_tag=C9F00_01315
NZ_PYKC01000005.1	Protein Homology	CDS	16616	17782	.	-	0	ID=cds-WP_000681340.1;Parent=gene-C9F00_RS01280;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9F00_RS01280;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	pseudogene	17945	18172	.	-	.	ID=gene-C9F00_RS01285;Name=C9F00_RS01285;end_range=18172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS01285;old_locus_tag=C9F00_01320;partial=true;pseudo=true
NZ_PYKC01000005.1	Protein Homology	CDS	17945	18172	.	-	0	ID=cds-C9F00_RS01285;Parent=gene-C9F00_RS01285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9F00_RS01285;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	18094	18351	.	-	.	ID=gene-C9F00_RS01290;Name=C9F00_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01290;old_locus_tag=C9F00_01325
NZ_PYKC01000005.1	Protein Homology	CDS	18094	18351	.	-	0	ID=cds-WP_135369520.1;Parent=gene-C9F00_RS01290;Dbxref=GenBank:WP_135369520.1;Name=WP_135369520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9F00_RS01290;product=aryl sulfotransferase;protein_id=WP_135369520.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	18470	19723	.	-	.	ID=gene-C9F00_RS01295;Name=C9F00_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01295;old_locus_tag=C9F00_01330
NZ_PYKC01000005.1	Protein Homology	CDS	18470	19723	.	-	0	ID=cds-WP_000457885.1;Parent=gene-C9F00_RS01295;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9F00_RS01295;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	19741	20937	.	-	.	ID=gene-C9F00_RS01300;Name=C9F00_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01300;old_locus_tag=C9F00_01335
NZ_PYKC01000005.1	Protein Homology	CDS	19741	20937	.	-	0	ID=cds-WP_001189145.1;Parent=gene-C9F00_RS01300;Dbxref=GenBank:WP_001189145.1;Name=WP_001189145.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9F00_RS01300;product=anaerobic sulfatase maturase;protein_id=WP_001189145.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	21041	22534	.	-	.	ID=gene-C9F00_RS01305;Name=C9F00_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01305;old_locus_tag=C9F00_01340
NZ_PYKC01000005.1	Protein Homology	CDS	21041	22534	.	-	0	ID=cds-WP_000754366.1;Parent=gene-C9F00_RS01305;Dbxref=GenBank:WP_000754366.1;Name=WP_000754366.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9F00_RS01305;product=sulfatase family protein;protein_id=WP_000754366.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	22555	23319	.	-	.	ID=gene-C9F00_RS01310;Name=C9F00_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01310;old_locus_tag=C9F00_01345
NZ_PYKC01000005.1	Protein Homology	CDS	22555	23319	.	-	0	ID=cds-WP_000052612.1;Parent=gene-C9F00_RS01310;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=C9F00_RS01310;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	pseudogene	23760	24156	.	+	.	ID=gene-C9F00_RS24680;Name=C9F00_RS24680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24680;old_locus_tag=C9F00_01350;partial=true;pseudo=true;start_range=.,23760
NZ_PYKC01000005.1	Protein Homology	CDS	23760	24156	.	+	0	ID=cds-C9F00_RS24680;Parent=gene-C9F00_RS24680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633260.1;locus_tag=C9F00_RS24680;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;start_range=.,23760;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	24294	24485	.	-	.	ID=gene-C9F00_RS01320;Name=C9F00_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01320;old_locus_tag=C9F00_01355
NZ_PYKC01000005.1	GeneMarkS-2+	CDS	24294	24485	.	-	0	ID=cds-WP_012218477.1;Parent=gene-C9F00_RS01320;Dbxref=GenBank:WP_012218477.1;Name=WP_012218477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS01320;product=hypothetical protein;protein_id=WP_012218477.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	25233	25682	.	+	.	ID=gene-C9F00_RS01325;Name=C9F00_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01325;old_locus_tag=C9F00_01360
NZ_PYKC01000005.1	Protein Homology	CDS	25233	25682	.	+	0	ID=cds-WP_135369545.1;Parent=gene-C9F00_RS01325;Dbxref=GenBank:WP_135369545.1;Name=WP_135369545.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9F00_RS01325;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369545.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	25782	26069	.	-	.	ID=gene-C9F00_RS01330;Name=C9F00_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01330;old_locus_tag=C9F00_01365
NZ_PYKC01000005.1	Protein Homology	CDS	25782	26069	.	-	0	ID=cds-WP_000839831.1;Parent=gene-C9F00_RS01330;Dbxref=GenBank:WP_000839831.1;Name=WP_000839831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9F00_RS01330;product=hypothetical protein;protein_id=WP_000839831.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	26108	26953	.	-	.	ID=gene-C9F00_RS01335;Name=C9F00_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01335;old_locus_tag=C9F00_01370
NZ_PYKC01000005.1	Protein Homology	CDS	26108	26953	.	-	0	ID=cds-WP_000291393.1;Parent=gene-C9F00_RS01335;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9F00_RS01335;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	27018	27749	.	-	.	ID=gene-C9F00_RS01340;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9F00_RS01340;old_locus_tag=C9F00_01375
NZ_PYKC01000005.1	Protein Homology	CDS	27018	27749	.	-	0	ID=cds-WP_135369546.1;Parent=gene-C9F00_RS01340;Dbxref=GenBank:WP_135369546.1;Name=WP_135369546.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9F00_RS01340;product=fimbrial chaperone BcfG;protein_id=WP_135369546.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	27715	28233	.	-	.	ID=gene-C9F00_RS01345;Name=C9F00_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01345;old_locus_tag=C9F00_01380
NZ_PYKC01000005.1	Protein Homology	CDS	27715	28233	.	-	0	ID=cds-WP_001243232.1;Parent=gene-C9F00_RS01345;Dbxref=GenBank:WP_001243232.1;Name=WP_001243232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9F00_RS01345;product=fimbrial protein BcfF;protein_id=WP_001243232.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	28249	28794	.	-	.	ID=gene-C9F00_RS01350;Name=C9F00_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01350;old_locus_tag=C9F00_01385
NZ_PYKC01000005.1	Protein Homology	CDS	28249	28794	.	-	0	ID=cds-WP_001082038.1;Parent=gene-C9F00_RS01350;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9F00_RS01350;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	28795	29802	.	-	.	ID=gene-C9F00_RS01355;Name=C9F00_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01355;old_locus_tag=C9F00_01390
NZ_PYKC01000005.1	Protein Homology	CDS	28795	29802	.	-	0	ID=cds-WP_000701245.1;Parent=gene-C9F00_RS01355;Dbxref=GenBank:WP_000701245.1;Name=WP_000701245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9F00_RS01355;product=fimbrial protein BcfD;protein_id=WP_000701245.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	29803	32424	.	-	.	ID=gene-C9F00_RS01360;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9F00_RS01360;old_locus_tag=C9F00_01395
NZ_PYKC01000005.1	Protein Homology	CDS	29803	32424	.	-	0	ID=cds-WP_001245865.1;Parent=gene-C9F00_RS01360;Dbxref=GenBank:WP_001245865.1;Name=WP_001245865.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9F00_RS01360;product=fimbrial usher BcfC;protein_id=WP_001245865.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	32429	33115	.	-	.	ID=gene-C9F00_RS01365;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9F00_RS01365;old_locus_tag=C9F00_01400
NZ_PYKC01000005.1	Protein Homology	CDS	32429	33115	.	-	0	ID=cds-WP_000742551.1;Parent=gene-C9F00_RS01365;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9F00_RS01365;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	33216	33758	.	-	.	ID=gene-C9F00_RS01370;Name=C9F00_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01370;old_locus_tag=C9F00_01405
NZ_PYKC01000005.1	Protein Homology	CDS	33216	33758	.	-	0	ID=cds-WP_000743357.1;Parent=gene-C9F00_RS01370;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9F00_RS01370;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	34188	34892	.	-	.	ID=gene-C9F00_RS01375;Name=C9F00_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01375;old_locus_tag=C9F00_01410
NZ_PYKC01000005.1	Protein Homology	CDS	34188	34892	.	-	0	ID=cds-WP_023242936.1;Parent=gene-C9F00_RS01375;Dbxref=GenBank:WP_023242936.1;Name=WP_023242936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9F00_RS01375;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023242936.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	35173	38169	.	-	.	ID=gene-C9F00_RS01380;Name=C9F00_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01380;old_locus_tag=C9F00_01415
NZ_PYKC01000005.1	Protein Homology	CDS	35173	38169	.	-	0	ID=cds-WP_050068122.1;Parent=gene-C9F00_RS01380;Dbxref=GenBank:WP_050068122.1;Name=WP_050068122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9F00_RS01380;product=hypothetical protein;protein_id=WP_050068122.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	38262	40361	.	-	.	ID=gene-C9F00_RS01385;Name=C9F00_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01385;old_locus_tag=C9F00_01420
NZ_PYKC01000005.1	Protein Homology	CDS	38262	40361	.	-	0	ID=cds-WP_135369547.1;Parent=gene-C9F00_RS01385;Dbxref=GenBank:WP_135369547.1;Name=WP_135369547.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9F00_RS01385;product=glycosyl hydrolase family 18 protein;protein_id=WP_135369547.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	40742	41185	.	+	.	ID=gene-C9F00_RS01390;Name=C9F00_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01390;old_locus_tag=C9F00_01425
NZ_PYKC01000005.1	Protein Homology	CDS	40742	41185	.	+	0	ID=cds-WP_000860681.1;Parent=gene-C9F00_RS01390;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9F00_RS01390;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	41202	41735	.	+	.	ID=gene-C9F00_RS01395;Name=C9F00_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01395;old_locus_tag=C9F00_01430
NZ_PYKC01000005.1	Protein Homology	CDS	41202	41735	.	+	0	ID=cds-WP_001068132.1;Parent=gene-C9F00_RS01395;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9F00_RS01395;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	41796	42140	.	-	.	ID=gene-C9F00_RS01400;Name=C9F00_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01400;old_locus_tag=C9F00_01435
NZ_PYKC01000005.1	Protein Homology	CDS	41796	42140	.	-	0	ID=cds-WP_000026889.1;Parent=gene-C9F00_RS01400;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9F00_RS01400;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	42267	43214	.	-	.	ID=gene-C9F00_RS01405;Name=C9F00_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01405;old_locus_tag=C9F00_01440
NZ_PYKC01000005.1	Protein Homology	CDS	42267	43214	.	-	0	ID=cds-WP_000534907.1;Parent=gene-C9F00_RS01405;Dbxref=GenBank:WP_000534907.1;Name=WP_000534907.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9F00_RS01405;product=LysR family transcriptional regulator;protein_id=WP_000534907.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	43494	44633	.	-	.	ID=gene-C9F00_RS01410;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS01410;old_locus_tag=C9F00_01445
NZ_PYKC01000005.1	Protein Homology	CDS	43494	44633	.	-	0	ID=cds-WP_001119009.1;Parent=gene-C9F00_RS01410;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9F00_RS01410;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	44719	46635	.	-	.	ID=gene-C9F00_RS01415;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9F00_RS01415;old_locus_tag=C9F00_01450
NZ_PYKC01000005.1	Protein Homology	CDS	44719	46635	.	-	0	ID=cds-WP_000516126.1;Parent=gene-C9F00_RS01415;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F00_RS01415;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	46983	47387	.	+	.	ID=gene-C9F00_RS01420;Name=C9F00_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01420;old_locus_tag=C9F00_01455
NZ_PYKC01000005.1	Protein Homology	CDS	46983	47387	.	+	0	ID=cds-WP_001258086.1;Parent=gene-C9F00_RS01420;Dbxref=GenBank:WP_001258086.1;Name=WP_001258086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9F00_RS01420;product=DUF2541 family protein;protein_id=WP_001258086.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	47423	48136	.	+	.	ID=gene-C9F00_RS01425;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9F00_RS01425;old_locus_tag=C9F00_01460
NZ_PYKC01000005.1	Protein Homology	CDS	47423	48136	.	+	0	ID=cds-WP_001103477.1;Parent=gene-C9F00_RS01425;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9F00_RS01425;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	48286	48852	.	+	.	ID=gene-C9F00_RS01430;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9F00_RS01430;old_locus_tag=C9F00_01465
NZ_PYKC01000005.1	Protein Homology	CDS	48286	48852	.	+	0	ID=cds-WP_000528525.1;Parent=gene-C9F00_RS01430;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9F00_RS01430;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	48909	49499	.	-	.	ID=gene-C9F00_RS01435;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9F00_RS01435;old_locus_tag=C9F00_01470
NZ_PYKC01000005.1	Protein Homology	CDS	48909	49499	.	-	0	ID=cds-WP_000380373.1;Parent=gene-C9F00_RS01435;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9F00_RS01435;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	49610	50563	.	-	.	ID=gene-C9F00_RS01440;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F00_RS01440;old_locus_tag=C9F00_01475
NZ_PYKC01000005.1	Protein Homology	CDS	49610	50563	.	-	0	ID=cds-WP_000130175.1;Parent=gene-C9F00_RS01440;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9F00_RS01440;product=transaldolase;protein_id=WP_000130175.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	50832	52262	.	+	.	ID=gene-C9F00_RS01445;Name=C9F00_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01445;old_locus_tag=C9F00_01480
NZ_PYKC01000005.1	Protein Homology	CDS	50832	52262	.	+	0	ID=cds-WP_050068120.1;Parent=gene-C9F00_RS01445;Dbxref=GenBank:WP_050068120.1;Name=WP_050068120.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9F00_RS01445;product=alanine/glycine:cation symporter family protein;protein_id=WP_050068120.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	52341	53114	.	+	.	ID=gene-C9F00_RS01450;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9F00_RS01450;old_locus_tag=C9F00_01485
NZ_PYKC01000005.1	Protein Homology	CDS	52341	53114	.	+	0	ID=cds-WP_000906175.1;Parent=gene-C9F00_RS01450;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9F00_RS01450;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	53208	54494	.	-	.	ID=gene-C9F00_RS01455;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9F00_RS01455;old_locus_tag=C9F00_01490
NZ_PYKC01000005.1	Protein Homology	CDS	53208	54494	.	-	0	ID=cds-WP_135492089.1;Parent=gene-C9F00_RS01455;Dbxref=GenBank:WP_135492089.1;Name=WP_135492089.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F00_RS01455;product=threonine synthase;protein_id=WP_135492089.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	54498	55427	.	-	.	ID=gene-C9F00_RS01460;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9F00_RS01460;old_locus_tag=C9F00_01495
NZ_PYKC01000005.1	Protein Homology	CDS	54498	55427	.	-	0	ID=cds-WP_000241685.1;Parent=gene-C9F00_RS01460;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9F00_RS01460;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	55429	57891	.	-	.	ID=gene-C9F00_RS01465;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9F00_RS01465;old_locus_tag=C9F00_01500
NZ_PYKC01000005.1	Protein Homology	CDS	55429	57891	.	-	0	ID=cds-WP_001264677.1;Parent=gene-C9F00_RS01465;Dbxref=GenBank:WP_001264677.1;Name=WP_001264677.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F00_RS01465;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264677.1;transl_table=11
NZ_PYKC01000005.1	cmsearch	sequence_feature	57918	58038	.	-	.	ID=id-NZ_PYKC01000005.1:57918..58038;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000005.1	RefSeq	gene	57974	58039	.	-	.	ID=gene-C9F00_RS01470;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9F00_RS01470;old_locus_tag=C9F00_01505
NZ_PYKC01000005.1	Protein Homology	CDS	57974	58039	.	-	0	ID=cds-WP_001575544.1;Parent=gene-C9F00_RS01470;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9F00_RS01470;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	58261	58938	.	-	.	ID=gene-C9F00_RS01475;Name=C9F00_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01475;old_locus_tag=C9F00_01510
NZ_PYKC01000005.1	Protein Homology	CDS	58261	58938	.	-	0	ID=cds-WP_135369338.1;Parent=gene-C9F00_RS01475;Dbxref=GenBank:WP_135369338.1;Name=WP_135369338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266778.1;locus_tag=C9F00_RS01475;product=tRNA/rRNA methyltransferase;protein_id=WP_135369338.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	59338	59478	.	-	.	ID=gene-C9F00_RS01480;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=C9F00_RS01480;old_locus_tag=C9F00_01515
NZ_PYKC01000005.1	Protein Homology	CDS	59338	59478	.	-	0	ID=cds-WP_001541509.1;Parent=gene-C9F00_RS01480;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9F00_RS01480;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	59574	60290	.	+	.	ID=gene-C9F00_RS01485;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9F00_RS01485;old_locus_tag=C9F00_01520
NZ_PYKC01000005.1	Protein Homology	CDS	59574	60290	.	+	0	ID=cds-WP_001194359.1;Parent=gene-C9F00_RS01485;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9F00_RS01485;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	60557	60871	.	+	.	ID=gene-C9F00_RS01490;Name=C9F00_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01490;old_locus_tag=C9F00_01525
NZ_PYKC01000005.1	Protein Homology	CDS	60557	60871	.	+	0	ID=cds-WP_135369339.1;Parent=gene-C9F00_RS01490;Dbxref=GenBank:WP_135369339.1;Name=WP_135369339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9F00_RS01490;product=hypothetical protein;protein_id=WP_135369339.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	61256	61927	.	+	.	ID=gene-C9F00_RS01495;Name=C9F00_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01495;old_locus_tag=C9F00_01530
NZ_PYKC01000005.1	Protein Homology	CDS	61256	61927	.	+	0	ID=cds-WP_000811635.1;Parent=gene-C9F00_RS01495;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9F00_RS01495;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	62266	62811	.	+	.	ID=gene-C9F00_RS01500;Name=C9F00_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01500;old_locus_tag=C9F00_01535
NZ_PYKC01000005.1	Protein Homology	CDS	62266	62811	.	+	0	ID=cds-WP_000482239.1;Parent=gene-C9F00_RS01500;Dbxref=GenBank:WP_000482239.1;Name=WP_000482239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9F00_RS01500;product=fimbrial protein;protein_id=WP_000482239.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	62882	63565	.	+	.	ID=gene-C9F00_RS01505;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9F00_RS01505;old_locus_tag=C9F00_01540
NZ_PYKC01000005.1	Protein Homology	CDS	62882	63565	.	+	0	ID=cds-WP_000680523.1;Parent=gene-C9F00_RS01505;Dbxref=GenBank:WP_000680523.1;Name=WP_000680523.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9F00_RS01505;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680523.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	63611	66148	.	+	.	ID=gene-C9F00_RS01510;Name=C9F00_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01510;old_locus_tag=C9F00_01545
NZ_PYKC01000005.1	Protein Homology	CDS	63611	66148	.	+	0	ID=cds-WP_001160707.1;Parent=gene-C9F00_RS01510;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F00_RS01510;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	66166	66723	.	+	.	ID=gene-C9F00_RS01515;Name=C9F00_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01515;old_locus_tag=C9F00_01550
NZ_PYKC01000005.1	Protein Homology	CDS	66166	66723	.	+	0	ID=cds-WP_001056984.1;Parent=gene-C9F00_RS01515;Dbxref=GenBank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9F00_RS01515;product=fimbrial protein;protein_id=WP_001056984.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	66764	67849	.	+	.	ID=gene-C9F00_RS01520;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9F00_RS01520;old_locus_tag=C9F00_01555
NZ_PYKC01000005.1	Protein Homology	CDS	66764	67849	.	+	0	ID=cds-WP_135369561.1;Parent=gene-C9F00_RS01520;Dbxref=GenBank:WP_135369561.1;Name=WP_135369561.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9F00_RS01520;product=fimbrial major subunit SthE;protein_id=WP_135369561.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	67907	69256	.	-	.	ID=gene-C9F00_RS01525;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=C9F00_RS01525;old_locus_tag=C9F00_01560
NZ_PYKC01000005.1	Protein Homology	CDS	67907	69256	.	-	0	ID=cds-WP_000920394.1;Parent=gene-C9F00_RS01525;Dbxref=GenBank:WP_000920394.1;Name=WP_000920394.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=C9F00_RS01525;product=cell envelope integrity protein CreD;protein_id=WP_000920394.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	69314	70738	.	-	.	ID=gene-C9F00_RS01530;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9F00_RS01530;old_locus_tag=C9F00_01565
NZ_PYKC01000005.1	Protein Homology	CDS	69314	70738	.	-	0	ID=cds-WP_023232163.1;Parent=gene-C9F00_RS01530;Dbxref=GenBank:WP_023232163.1;Name=WP_023232163.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9F00_RS01530;product=two-component system sensor histidine kinase CreC;protein_id=WP_023232163.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	70738	71427	.	-	.	ID=gene-C9F00_RS01535;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9F00_RS01535;old_locus_tag=C9F00_01570
NZ_PYKC01000005.1	Protein Homology	CDS	70738	71427	.	-	0	ID=cds-WP_001187046.1;Parent=gene-C9F00_RS01535;Dbxref=GenBank:WP_001187046.1;Name=WP_001187046.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9F00_RS01535;product=two-component system response regulator CreB;protein_id=WP_001187046.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	71440	71913	.	-	.	ID=gene-C9F00_RS01540;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9F00_RS01540;old_locus_tag=C9F00_01575
NZ_PYKC01000005.1	Protein Homology	CDS	71440	71913	.	-	0	ID=cds-WP_000875811.1;Parent=gene-C9F00_RS01540;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9F00_RS01540;product=protein CreA;protein_id=WP_000875811.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	72125	72994	.	+	.	ID=gene-C9F00_RS01545;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9F00_RS01545;old_locus_tag=C9F00_01580
NZ_PYKC01000005.1	Protein Homology	CDS	72125	72994	.	+	0	ID=cds-WP_000371685.1;Parent=gene-C9F00_RS01545;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9F00_RS01545;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	72991	73638	.	-	.	ID=gene-C9F00_RS01550;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9F00_RS01550;old_locus_tag=C9F00_01585
NZ_PYKC01000005.1	Protein Homology	CDS	72991	73638	.	-	0	ID=cds-WP_000942363.1;Parent=gene-C9F00_RS01550;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9F00_RS01550;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	73687	74202	.	+	.	ID=gene-C9F00_RS01555;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9F00_RS01555;old_locus_tag=C9F00_01590
NZ_PYKC01000005.1	Protein Homology	CDS	73687	74202	.	+	0	ID=cds-WP_000554310.1;Parent=gene-C9F00_RS01555;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9F00_RS01555;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	74304	74630	.	-	.	ID=gene-C9F00_RS01565;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9F00_RS01565;old_locus_tag=C9F00_01600
NZ_PYKC01000005.1	Protein Homology	CDS	74304	74630	.	-	0	ID=cds-WP_000192003.1;Parent=gene-C9F00_RS01565;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9F00_RS01565;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	74688	76625	.	-	.	ID=gene-C9F00_RS01570;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9F00_RS01570;old_locus_tag=C9F00_01605
NZ_PYKC01000005.1	Protein Homology	CDS	74688	76625	.	-	0	ID=cds-WP_000373267.1;Parent=gene-C9F00_RS01570;Dbxref=GenBank:WP_000373267.1;Name=WP_000373267.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=C9F00_RS01570;product=murein transglycosylase;protein_id=WP_000373267.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	76834	78501	.	+	.	ID=gene-C9F00_RS01575;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9F00_RS01575;old_locus_tag=C9F00_01615
NZ_PYKC01000005.1	Protein Homology	CDS	76834	78501	.	+	0	ID=cds-WP_000046770.1;Parent=gene-C9F00_RS01575;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9F00_RS01575;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	78619	79851	.	-	.	ID=gene-C9F00_RS01580;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9F00_RS01580;old_locus_tag=C9F00_01620
NZ_PYKC01000005.1	Protein Homology	CDS	78619	79851	.	-	0	ID=cds-WP_023195063.1;Parent=gene-C9F00_RS01580;Dbxref=GenBank:WP_023195063.1;Name=WP_023195063.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9F00_RS01580;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_023195063.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	80002	81384	.	-	.	ID=gene-C9F00_RS01585;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9F00_RS01585;old_locus_tag=C9F00_01625
NZ_PYKC01000005.1	Protein Homology	CDS	80002	81384	.	-	0	ID=cds-WP_135492091.1;Parent=gene-C9F00_RS01585;Dbxref=GenBank:WP_135492091.1;Name=WP_135492091.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9F00_RS01585;product=DNA repair protein RadA;protein_id=WP_135492091.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	81468	82436	.	-	.	ID=gene-C9F00_RS01590;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F00_RS01590;old_locus_tag=C9F00_01630
NZ_PYKC01000005.1	Protein Homology	CDS	81468	82436	.	-	0	ID=cds-WP_001132983.1;Parent=gene-C9F00_RS01590;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9F00_RS01590;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	82553	83197	.	+	.	ID=gene-C9F00_RS01600;Name=C9F00_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01600;old_locus_tag=C9F00_01640
NZ_PYKC01000005.1	Protein Homology	CDS	82553	83197	.	+	0	ID=cds-WP_000090067.1;Parent=gene-C9F00_RS01600;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9F00_RS01600;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	83231	84247	.	+	.	ID=gene-C9F00_RS01605;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9F00_RS01605;old_locus_tag=C9F00_01645
NZ_PYKC01000005.1	Protein Homology	CDS	83231	84247	.	+	0	ID=cds-WP_061376692.1;Parent=gene-C9F00_RS01605;Dbxref=GenBank:WP_061376692.1;Name=WP_061376692.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9F00_RS01605;product=lipoate--protein ligase LplA;protein_id=WP_061376692.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	pseudogene	84332	84824	.	-	.	ID=gene-C9F00_RS01615;Name=C9F00_RS01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS01615;old_locus_tag=C9F00_01650;pseudo=true
NZ_PYKC01000005.1	Protein Homology	CDS	84332	84824	.	-	0	ID=cds-C9F00_RS01615;Parent=gene-C9F00_RS01615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=C9F00_RS01615;product=REP-associated tyrosine transposase;pseudo=true;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	85031	85750	.	-	.	ID=gene-C9F00_RS01620;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9F00_RS01620;old_locus_tag=C9F00_01655
NZ_PYKC01000005.1	Protein Homology	CDS	85031	85750	.	-	0	ID=cds-WP_000224864.1;Parent=gene-C9F00_RS01620;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9F00_RS01620;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	85960	87183	.	-	.	ID=gene-C9F00_RS01625;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9F00_RS01625;old_locus_tag=C9F00_01660
NZ_PYKC01000005.1	Protein Homology	CDS	85960	87183	.	-	0	ID=cds-WP_000816454.1;Parent=gene-C9F00_RS01625;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9F00_RS01625;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	87235	88557	.	-	.	ID=gene-C9F00_RS01630;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9F00_RS01630;old_locus_tag=C9F00_01665
NZ_PYKC01000005.1	Protein Homology	CDS	87235	88557	.	-	0	ID=cds-WP_000477838.1;Parent=gene-C9F00_RS01630;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9F00_RS01630;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	88681	89460	.	-	.	ID=gene-C9F00_RS01635;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9F00_RS01635;old_locus_tag=C9F00_01670
NZ_PYKC01000005.1	Protein Homology	CDS	88681	89460	.	-	0	ID=cds-WP_001519713.1;Parent=gene-C9F00_RS01635;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9F00_RS01635;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	89720	91270	.	+	.	ID=gene-C9F00_RS01640;Name=C9F00_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01640;old_locus_tag=C9F00_01675
NZ_PYKC01000005.1	Protein Homology	CDS	89720	91270	.	+	0	ID=cds-WP_135369562.1;Parent=gene-C9F00_RS01640;Dbxref=GenBank:WP_135369562.1;Name=WP_135369562.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9F00_RS01640;product=YjjI family glycine radical enzyme;protein_id=WP_135369562.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	91242	92105	.	+	.	ID=gene-C9F00_RS01645;Name=C9F00_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01645;old_locus_tag=C9F00_01680
NZ_PYKC01000005.1	Protein Homology	CDS	91242	92105	.	+	0	ID=cds-WP_001064944.1;Parent=gene-C9F00_RS01645;Dbxref=GenBank:WP_001064944.1;Name=WP_001064944.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9F00_RS01645;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064944.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	92138	92911	.	-	.	ID=gene-C9F00_RS01650;Name=C9F00_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01650;old_locus_tag=C9F00_01685
NZ_PYKC01000005.1	Protein Homology	CDS	92138	92911	.	-	0	ID=cds-WP_135369563.1;Parent=gene-C9F00_RS01650;Dbxref=GenBank:WP_135369563.1;Name=WP_135369563.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9F00_RS01650;product=metal-dependent hydrolase;protein_id=WP_135369563.1;transl_table=11
NZ_PYKC01000005.1	RefSeq	pseudogene	92908	93891	.	-	.	ID=gene-C9F00_RS01655;Name=C9F00_RS01655;end_range=93891,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS01655;old_locus_tag=C9F00_01690;partial=true;pseudo=true
NZ_PYKC01000005.1	Protein Homology	CDS	92908	93891	.	-	0	ID=cds-C9F00_RS01655;Parent=gene-C9F00_RS01655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313362.1;locus_tag=C9F00_RS01655;partial=true;product=patatin-like phospholipase family protein;pseudo=true;transl_table=11
NZ_PYKC01000005.1	RefSeq	gene	93848	94405	.	-	.	ID=gene-C9F00_RS01660;Name=C9F00_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01660;old_locus_tag=C9F00_01695
NZ_PYKC01000005.1	Protein Homology	CDS	93848	94405	.	-	0	ID=cds-WP_348628817.1;Parent=gene-C9F00_RS01660;Dbxref=GenBank:WP_348628817.1;Name=WP_348628817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=C9F00_RS01660;product=LysR substrate-binding domain-containing protein;protein_id=WP_348628817.1;transl_table=11
##sequence-region NZ_PYKC01000047.1 1 37435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000047.1	RefSeq	region	1	37435	.	+	.	ID=NZ_PYKC01000047.1:1..37435;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000047.1	RefSeq	gene	1	806	.	-	.	ID=gene-C9F00_RS07720;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9F00_RS07720;old_locus_tag=C9F00_07885;partial=true;start_range=.,1
NZ_PYKC01000047.1	Protein Homology	CDS	1	806	.	-	0	ID=cds-WP_135492232.1;Parent=gene-C9F00_RS07720;Dbxref=GenBank:WP_135492232.1;Name=WP_135492232.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F00_RS07720;partial=true;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_135492232.1;start_range=.,1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	817	1929	.	-	.	ID=gene-C9F00_RS07725;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9F00_RS07725;old_locus_tag=C9F00_07890
NZ_PYKC01000047.1	Protein Homology	CDS	817	1929	.	-	0	ID=cds-WP_000131713.1;Parent=gene-C9F00_RS07725;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9F00_RS07725;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	1932	3833	.	-	.	ID=gene-C9F00_RS07730;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F00_RS07730;old_locus_tag=C9F00_07895
NZ_PYKC01000047.1	Protein Homology	CDS	1932	3833	.	-	0	ID=cds-WP_000828700.1;Parent=gene-C9F00_RS07730;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9F00_RS07730;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	3864	4331	.	-	.	ID=gene-C9F00_RS07735;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=C9F00_RS07735;old_locus_tag=C9F00_07900
NZ_PYKC01000047.1	Protein Homology	CDS	3864	4331	.	-	0	ID=cds-WP_135492234.1;Parent=gene-C9F00_RS07735;Dbxref=GenBank:WP_135492234.1;Name=WP_135492234.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9F00_RS07735;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_135492234.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	4335	4652	.	-	.	ID=gene-C9F00_RS07740;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9F00_RS07740;old_locus_tag=C9F00_07905
NZ_PYKC01000047.1	Protein Homology	CDS	4335	4652	.	-	0	ID=cds-WP_001161670.1;Parent=gene-C9F00_RS07740;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9F00_RS07740;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	4981	5589	.	-	.	ID=gene-C9F00_RS07745;Name=C9F00_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07745;old_locus_tag=C9F00_07910
NZ_PYKC01000047.1	Protein Homology	CDS	4981	5589	.	-	0	ID=cds-WP_135369789.1;Parent=gene-C9F00_RS07745;Dbxref=GenBank:WP_135369789.1;Name=WP_135369789.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9F00_RS07745;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_135369789.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	5686	6780	.	+	.	ID=gene-C9F00_RS07750;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9F00_RS07750;old_locus_tag=C9F00_07915
NZ_PYKC01000047.1	Protein Homology	CDS	5686	6780	.	+	0	ID=cds-WP_001173259.1;Parent=gene-C9F00_RS07750;Dbxref=GenBank:WP_001173259.1;Name=WP_001173259.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9F00_RS07750;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173259.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	6755	7396	.	-	.	ID=gene-C9F00_RS07755;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9F00_RS07755;old_locus_tag=C9F00_07920
NZ_PYKC01000047.1	Protein Homology	CDS	6755	7396	.	-	0	ID=cds-WP_001518902.1;Parent=gene-C9F00_RS07755;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9F00_RS07755;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	7398	8429	.	-	.	ID=gene-C9F00_RS07760;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9F00_RS07760;old_locus_tag=C9F00_07925
NZ_PYKC01000047.1	Protein Homology	CDS	7398	8429	.	-	0	ID=cds-WP_135369788.1;Parent=gene-C9F00_RS07760;Dbxref=GenBank:WP_135369788.1;Name=WP_135369788.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9F00_RS07760;product=DNA polymerase III subunit delta;protein_id=WP_135369788.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	8429	9019	.	-	.	ID=gene-C9F00_RS07765;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9F00_RS07765;old_locus_tag=C9F00_07930
NZ_PYKC01000047.1	Protein Homology	CDS	8429	9019	.	-	0	ID=cds-WP_080219684.1;Parent=gene-C9F00_RS07765;Dbxref=GenBank:WP_080219684.1;Name=WP_080219684.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9F00_RS07765;product=LPS assembly lipoprotein LptE;protein_id=WP_080219684.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	9034	11616	.	-	.	ID=gene-C9F00_RS07770;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F00_RS07770;old_locus_tag=C9F00_07935
NZ_PYKC01000047.1	Protein Homology	CDS	9034	11616	.	-	0	ID=cds-WP_001157916.1;Parent=gene-C9F00_RS07770;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9F00_RS07770;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	11853	12194	.	+	.	ID=gene-C9F00_RS07775;Name=C9F00_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07775;old_locus_tag=C9F00_07940
NZ_PYKC01000047.1	Protein Homology	CDS	11853	12194	.	+	0	ID=cds-WP_001574029.1;Parent=gene-C9F00_RS07775;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9F00_RS07775;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	12211	13383	.	+	.	ID=gene-C9F00_RS07780;Name=C9F00_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07780;old_locus_tag=C9F00_07945
NZ_PYKC01000047.1	Protein Homology	CDS	12211	13383	.	+	0	ID=cds-WP_001670689.1;Parent=gene-C9F00_RS07780;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9F00_RS07780;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	13433	14386	.	+	.	ID=gene-C9F00_RS07785;Name=C9F00_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07785;old_locus_tag=C9F00_07950
NZ_PYKC01000047.1	Protein Homology	CDS	13433	14386	.	+	0	ID=cds-WP_135492235.1;Parent=gene-C9F00_RS07785;Dbxref=GenBank:WP_135492235.1;Name=WP_135492235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9F00_RS07785;product=2-keto-3-deoxygluconate permease;protein_id=WP_135492235.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	14454	16382	.	+	.	ID=gene-C9F00_RS07790;Name=C9F00_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07790;old_locus_tag=C9F00_07955
NZ_PYKC01000047.1	Protein Homology	CDS	14454	16382	.	+	0	ID=cds-WP_135369787.1;Parent=gene-C9F00_RS07790;Dbxref=GenBank:WP_135369787.1;Name=WP_135369787.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9F00_RS07790;product=sigma-54 interaction domain-containing protein;protein_id=WP_135369787.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	16475	16948	.	+	.	ID=gene-C9F00_RS07795;Name=C9F00_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07795;old_locus_tag=C9F00_07960
NZ_PYKC01000047.1	Protein Homology	CDS	16475	16948	.	+	0	ID=cds-WP_001044884.1;Parent=gene-C9F00_RS07795;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9F00_RS07795;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	16987	17982	.	-	.	ID=gene-C9F00_RS07800;Name=C9F00_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07800;old_locus_tag=C9F00_07965
NZ_PYKC01000047.1	Protein Homology	CDS	16987	17982	.	-	0	ID=cds-WP_135369786.1;Parent=gene-C9F00_RS07800;Dbxref=GenBank:WP_135369786.1;Name=WP_135369786.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9F00_RS07800;product=tetratricopeptide repeat protein;protein_id=WP_135369786.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	18107	18814	.	+	.	ID=gene-C9F00_RS07805;Name=C9F00_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07805;old_locus_tag=C9F00_07970
NZ_PYKC01000047.1	Protein Homology	CDS	18107	18814	.	+	0	ID=cds-WP_001531467.1;Parent=gene-C9F00_RS07805;Dbxref=GenBank:WP_001531467.1;Name=WP_001531467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9F00_RS07805;product=DUF1266 domain-containing protein;protein_id=WP_001531467.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	pseudogene	18811	20244	.	+	.	ID=gene-C9F00_RS07810;Name=C9F00_RS07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS07810;old_locus_tag=C9F00_07975;pseudo=true
NZ_PYKC01000047.1	Protein Homology	CDS	18811	20244	.	+	0	ID=cds-C9F00_RS07810;Parent=gene-C9F00_RS07810;Note=internal stop;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9F00_RS07810;product=J domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	20256	20960	.	+	.	ID=gene-C9F00_RS07815;Name=C9F00_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07815;old_locus_tag=C9F00_07980
NZ_PYKC01000047.1	Protein Homology	CDS	20256	20960	.	+	0	ID=cds-WP_000356620.1;Parent=gene-C9F00_RS07815;Dbxref=GenBank:WP_000356620.1;Name=WP_000356620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9F00_RS07815;product=DUF1266 domain-containing protein;protein_id=WP_000356620.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	20957	22429	.	+	.	ID=gene-C9F00_RS07820;Name=C9F00_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07820;old_locus_tag=C9F00_07985
NZ_PYKC01000047.1	Protein Homology	CDS	20957	22429	.	+	0	ID=cds-WP_103132974.1;Parent=gene-C9F00_RS07820;Dbxref=GenBank:WP_103132974.1;Name=WP_103132974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9F00_RS07820;product=J domain-containing protein;protein_id=WP_103132974.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	22451	24130	.	-	.	ID=gene-C9F00_RS07825;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=C9F00_RS07825;old_locus_tag=C9F00_07990
NZ_PYKC01000047.1	Protein Homology	CDS	22451	24130	.	-	0	ID=cds-WP_001523337.1;Parent=gene-C9F00_RS07825;Dbxref=GenBank:WP_001523337.1;Name=WP_001523337.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9F00_RS07825;product=molecular chaperone HscC;protein_id=WP_001523337.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	24206	25444	.	-	.	ID=gene-C9F00_RS07830;Name=C9F00_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07830;old_locus_tag=C9F00_07995
NZ_PYKC01000047.1	Protein Homology	CDS	24206	25444	.	-	0	ID=cds-WP_135492237.1;Parent=gene-C9F00_RS07830;Dbxref=GenBank:WP_135492237.1;Name=WP_135492237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9F00_RS07830;product=hypothetical protein;protein_id=WP_135492237.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	25476	26411	.	-	.	ID=gene-C9F00_RS07835;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9F00_RS07835;old_locus_tag=C9F00_08000
NZ_PYKC01000047.1	Protein Homology	CDS	25476	26411	.	-	0	ID=cds-WP_021000068.1;Parent=gene-C9F00_RS07835;Dbxref=GenBank:WP_021000068.1;Name=WP_021000068.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9F00_RS07835;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_021000068.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	26528	27253	.	-	.	ID=gene-C9F00_RS07840;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9F00_RS07840;old_locus_tag=C9F00_08005
NZ_PYKC01000047.1	Protein Homology	CDS	26528	27253	.	-	0	ID=cds-WP_000631369.1;Parent=gene-C9F00_RS07840;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9F00_RS07840;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	27253	27927	.	-	.	ID=gene-C9F00_RS07845;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9F00_RS07845;old_locus_tag=C9F00_08010
NZ_PYKC01000047.1	Protein Homology	CDS	27253	27927	.	-	0	ID=cds-WP_000272794.1;Parent=gene-C9F00_RS07845;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9F00_RS07845;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	27927	28667	.	-	.	ID=gene-C9F00_RS07850;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=C9F00_RS07850;old_locus_tag=C9F00_08015
NZ_PYKC01000047.1	Protein Homology	CDS	27927	28667	.	-	0	ID=cds-WP_000020930.1;Parent=gene-C9F00_RS07850;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9F00_RS07850;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	28827	29735	.	-	.	ID=gene-C9F00_RS07855;Name=C9F00_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07855;old_locus_tag=C9F00_08020
NZ_PYKC01000047.1	Protein Homology	CDS	28827	29735	.	-	0	ID=cds-WP_001518176.1;Parent=gene-C9F00_RS07855;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9F00_RS07855;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	30090	31628	.	-	.	ID=gene-C9F00_RS07860;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9F00_RS07860;old_locus_tag=C9F00_08025
NZ_PYKC01000047.1	Protein Homology	CDS	30090	31628	.	-	0	ID=cds-WP_135369790.1;Parent=gene-C9F00_RS07860;Dbxref=GenBank:WP_135369790.1;Name=WP_135369790.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9F00_RS07860;product=apolipoprotein N-acyltransferase;protein_id=WP_135369790.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	31648	32526	.	-	.	ID=gene-C9F00_RS07865;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9F00_RS07865;old_locus_tag=C9F00_08030
NZ_PYKC01000047.1	Protein Homology	CDS	31648	32526	.	-	0	ID=cds-WP_001278612.1;Parent=gene-C9F00_RS07865;Dbxref=GenBank:WP_001278612.1;Name=WP_001278612.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9F00_RS07865;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278612.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	32684	33157	.	-	.	ID=gene-C9F00_RS07870;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9F00_RS07870;old_locus_tag=C9F00_08035
NZ_PYKC01000047.1	Protein Homology	CDS	32684	33157	.	-	0	ID=cds-WP_000084477.1;Parent=gene-C9F00_RS07870;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9F00_RS07870;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	33154	34200	.	-	.	ID=gene-C9F00_RS07875;Name=C9F00_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07875;old_locus_tag=C9F00_08040
NZ_PYKC01000047.1	Protein Homology	CDS	33154	34200	.	-	0	ID=cds-WP_001018045.1;Parent=gene-C9F00_RS07875;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9F00_RS07875;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	34405	35829	.	-	.	ID=gene-C9F00_RS07880;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9F00_RS07880;old_locus_tag=C9F00_08045
NZ_PYKC01000047.1	Protein Homology	CDS	34405	35829	.	-	0	ID=cds-WP_001575805.1;Parent=gene-C9F00_RS07880;Dbxref=GenBank:WP_001575805.1;Name=WP_001575805.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9F00_RS07880;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001575805.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	35973	37148	.	+	.	ID=gene-C9F00_RS07885;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=C9F00_RS07885;old_locus_tag=C9F00_08050
NZ_PYKC01000047.1	Protein Homology	CDS	35973	37148	.	+	0	ID=cds-WP_000184633.1;Parent=gene-C9F00_RS07885;Dbxref=GenBank:WP_000184633.1;Name=WP_000184633.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9F00_RS07885;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184633.1;transl_table=11
NZ_PYKC01000047.1	RefSeq	gene	37279	37353	.	-	.	ID=gene-C9F00_RS07890;Name=C9F00_RS07890;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS07890;old_locus_tag=C9F00_08055
NZ_PYKC01000047.1	tRNAscan-SE	tRNA	37279	37353	.	-	.	ID=rna-C9F00_RS07890;Parent=gene-C9F00_RS07890;anticodon=(pos:complement(37319..37321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS07890;product=tRNA-Gln
NZ_PYKC01000047.1	tRNAscan-SE	exon	37279	37353	.	-	.	ID=exon-C9F00_RS07890-1;Parent=rna-C9F00_RS07890;anticodon=(pos:complement(37319..37321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS07890;product=tRNA-Gln
##sequence-region NZ_PYKC01000018.1 1 36727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000018.1	RefSeq	region	1	36727	.	+	.	ID=NZ_PYKC01000018.1:1..36727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000018.1	RefSeq	gene	1	1316	.	+	.	ID=gene-C9F00_RS03690;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9F00_RS03690;old_locus_tag=C9F00_03735;partial=true;start_range=.,1
NZ_PYKC01000018.1	Protein Homology	CDS	1	1316	.	+	2	ID=cds-WP_135492128.1;Parent=gene-C9F00_RS03690;Dbxref=GenBank:WP_135492128.1;Name=WP_135492128.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9F00_RS03690;partial=true;product=malate synthase A;protein_id=WP_135492128.1;start_range=.,1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	1348	2652	.	+	.	ID=gene-C9F00_RS03695;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9F00_RS03695;old_locus_tag=C9F00_03740
NZ_PYKC01000018.1	Protein Homology	CDS	1348	2652	.	+	0	ID=cds-WP_000857881.1;Parent=gene-C9F00_RS03695;Dbxref=GenBank:WP_000857881.1;Name=WP_000857881.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9F00_RS03695;product=isocitrate lyase;protein_id=WP_000857881.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	2754	4505	.	+	.	ID=gene-C9F00_RS03700;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9F00_RS03700;old_locus_tag=C9F00_03745
NZ_PYKC01000018.1	Protein Homology	CDS	2754	4505	.	+	0	ID=cds-WP_001137268.1;Parent=gene-C9F00_RS03700;Dbxref=GenBank:WP_001137268.1;Name=WP_001137268.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9F00_RS03700;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137268.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	4469	4876	.	-	.	ID=gene-C9F00_RS03705;Name=C9F00_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03705;old_locus_tag=C9F00_03750
NZ_PYKC01000018.1	Protein Homology	CDS	4469	4876	.	-	0	ID=cds-WP_010989091.1;Parent=gene-C9F00_RS03705;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9F00_RS03705;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	4887	5711	.	-	.	ID=gene-C9F00_RS03710;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9F00_RS03710;old_locus_tag=C9F00_03755
NZ_PYKC01000018.1	Protein Homology	CDS	4887	5711	.	-	0	ID=cds-WP_000226434.1;Parent=gene-C9F00_RS03710;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9F00_RS03710;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	6016	9699	.	+	.	ID=gene-C9F00_RS03715;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F00_RS03715;old_locus_tag=C9F00_03760
NZ_PYKC01000018.1	Protein Homology	CDS	6016	9699	.	+	0	ID=cds-WP_135492130.1;Parent=gene-C9F00_RS03715;Dbxref=GenBank:WP_135492130.1;Name=WP_135492130.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9F00_RS03715;product=methionine synthase;protein_id=WP_135492130.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	9966	11597	.	+	.	ID=gene-C9F00_RS03720;Name=C9F00_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03720;old_locus_tag=C9F00_03765
NZ_PYKC01000018.1	Protein Homology	CDS	9966	11597	.	+	0	ID=cds-WP_000956811.1;Parent=gene-C9F00_RS03720;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9F00_RS03720;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	11672	12361	.	-	.	ID=gene-C9F00_RS03725;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9F00_RS03725;old_locus_tag=C9F00_03770
NZ_PYKC01000018.1	Protein Homology	CDS	11672	12361	.	-	0	ID=cds-WP_135369517.1;Parent=gene-C9F00_RS03725;Dbxref=GenBank:WP_135369517.1;Name=WP_135369517.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9F00_RS03725;product=dipeptidase PepE;protein_id=WP_135369517.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	12433	12534	.	+	.	ID=gene-C9F00_RS03730;Name=C9F00_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03730;old_locus_tag=C9F00_03775
NZ_PYKC01000018.1	Protein Homology	CDS	12433	12534	.	+	0	ID=cds-WP_031606091.1;Parent=gene-C9F00_RS03730;Dbxref=GenBank:WP_031606091.1;Name=WP_031606091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9F00_RS03730;product=hypothetical protein;protein_id=WP_031606091.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	12569	13108	.	+	.	ID=gene-C9F00_RS03735;Name=C9F00_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03735;old_locus_tag=C9F00_03780
NZ_PYKC01000018.1	Protein Homology	CDS	12569	13108	.	+	0	ID=cds-WP_001096724.1;Parent=gene-C9F00_RS03735;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9F00_RS03735;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	13155	14024	.	+	.	ID=gene-C9F00_RS03740;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9F00_RS03740;old_locus_tag=C9F00_03785
NZ_PYKC01000018.1	Protein Homology	CDS	13155	14024	.	+	0	ID=cds-WP_000954611.1;Parent=gene-C9F00_RS03740;Dbxref=GenBank:WP_000954611.1;Name=WP_000954611.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9F00_RS03740;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954611.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	14021	14293	.	-	.	ID=gene-C9F00_RS03745;Name=C9F00_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03745;old_locus_tag=C9F00_03790
NZ_PYKC01000018.1	Protein Homology	CDS	14021	14293	.	-	0	ID=cds-WP_001207628.1;Parent=gene-C9F00_RS03745;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9F00_RS03745;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	14391	15332	.	-	.	ID=gene-C9F00_RS03750;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9F00_RS03750;old_locus_tag=C9F00_03795
NZ_PYKC01000018.1	Protein Homology	CDS	14391	15332	.	-	0	ID=cds-WP_000881652.1;Parent=gene-C9F00_RS03750;Dbxref=GenBank:WP_000881652.1;Name=WP_000881652.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9F00_RS03750;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881652.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	15594	16322	.	-	.	ID=gene-C9F00_RS03755;Name=C9F00_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03755;old_locus_tag=C9F00_03800
NZ_PYKC01000018.1	Protein Homology	CDS	15594	16322	.	-	0	ID=cds-WP_000587738.1;Parent=gene-C9F00_RS03755;Dbxref=GenBank:WP_000587738.1;Name=WP_000587738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9F00_RS03755;product=hypothetical protein;protein_id=WP_000587738.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	pseudogene	16519	16809	.	-	.	ID=gene-C9F00_RS03760;Name=C9F00_RS03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS03760;old_locus_tag=C9F00_03805;pseudo=true
NZ_PYKC01000018.1	Protein Homology	CDS	16519	16809	.	-	0	ID=cds-C9F00_RS03760;Parent=gene-C9F00_RS03760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9F00_RS03760;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	17062	17517	.	-	.	ID=gene-C9F00_RS03765;Name=C9F00_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03765;old_locus_tag=C9F00_03810
NZ_PYKC01000018.1	Protein Homology	CDS	17062	17517	.	-	0	ID=cds-WP_135369174.1;Parent=gene-C9F00_RS03765;Dbxref=GenBank:WP_135369174.1;Name=WP_135369174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9F00_RS03765;product=hypothetical protein;protein_id=WP_135369174.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	17514	18077	.	-	.	ID=gene-C9F00_RS03770;Name=C9F00_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03770;old_locus_tag=C9F00_03815
NZ_PYKC01000018.1	Protein Homology	CDS	17514	18077	.	-	0	ID=cds-WP_135369175.1;Parent=gene-C9F00_RS03770;Dbxref=GenBank:WP_135369175.1;Name=WP_135369175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520313.1;locus_tag=C9F00_RS03770;product=DUF4376 domain-containing protein;protein_id=WP_135369175.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	18129	19487	.	-	.	ID=gene-C9F00_RS03775;Name=C9F00_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03775;old_locus_tag=C9F00_03820
NZ_PYKC01000018.1	Protein Homology	CDS	18129	19487	.	-	0	ID=cds-WP_135492132.1;Parent=gene-C9F00_RS03775;Dbxref=GenBank:WP_135492132.1;Name=WP_135492132.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894561.1;locus_tag=C9F00_RS03775;product=phage tail protein;protein_id=WP_135492132.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	19490	20122	.	-	.	ID=gene-C9F00_RS03780;Name=C9F00_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03780;old_locus_tag=C9F00_03825
NZ_PYKC01000018.1	Protein Homology	CDS	19490	20122	.	-	0	ID=cds-WP_000359503.1;Parent=gene-C9F00_RS03780;Dbxref=GenBank:WP_000359503.1;Name=WP_000359503.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9F00_RS03780;product=phage tail protein I;protein_id=WP_000359503.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	20115	21230	.	-	.	ID=gene-C9F00_RS03785;Name=C9F00_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03785;old_locus_tag=C9F00_03830
NZ_PYKC01000018.1	Protein Homology	CDS	20115	21230	.	-	0	ID=cds-WP_135369172.1;Parent=gene-C9F00_RS03785;Dbxref=GenBank:WP_135369172.1;Name=WP_135369172.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9F00_RS03785;product=baseplate assembly protein;protein_id=WP_135369172.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	21221	21580	.	-	.	ID=gene-C9F00_RS03790;Name=C9F00_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03790;old_locus_tag=C9F00_03835
NZ_PYKC01000018.1	Protein Homology	CDS	21221	21580	.	-	0	ID=cds-WP_001093501.1;Parent=gene-C9F00_RS03790;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9F00_RS03790;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	21744	23291	.	-	.	ID=gene-C9F00_RS03795;Name=C9F00_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03795;old_locus_tag=C9F00_03840
NZ_PYKC01000018.1	Protein Homology	CDS	21744	23291	.	-	0	ID=cds-WP_079971588.1;Parent=gene-C9F00_RS03795;Dbxref=GenBank:WP_079971588.1;Name=WP_079971588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9F00_RS03795;product=DUF6056 family protein;protein_id=WP_079971588.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	23291	24220	.	-	.	ID=gene-C9F00_RS03800;Name=C9F00_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03800;old_locus_tag=C9F00_03845
NZ_PYKC01000018.1	Protein Homology	CDS	23291	24220	.	-	0	ID=cds-WP_023137582.1;Parent=gene-C9F00_RS03800;Dbxref=GenBank:WP_023137582.1;Name=WP_023137582.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9F00_RS03800;product=glycosyltransferase family 2 protein;protein_id=WP_023137582.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	24217	24579	.	-	.	ID=gene-C9F00_RS03805;Name=C9F00_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03805;old_locus_tag=C9F00_03850
NZ_PYKC01000018.1	Protein Homology	CDS	24217	24579	.	-	0	ID=cds-WP_000593184.1;Parent=gene-C9F00_RS03805;Dbxref=GenBank:WP_000593184.1;Name=WP_000593184.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9F00_RS03805;product=GtrA family protein;protein_id=WP_000593184.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	24903	25625	.	-	.	ID=gene-C9F00_RS03815;Name=C9F00_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03815;old_locus_tag=C9F00_03860
NZ_PYKC01000018.1	Protein Homology	CDS	24903	25625	.	-	0	ID=cds-WP_135369171.1;Parent=gene-C9F00_RS03815;Dbxref=GenBank:WP_135369171.1;Name=WP_135369171.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9F00_RS03815;product=phage baseplate assembly protein V;protein_id=WP_135369171.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	25635	26678	.	-	.	ID=gene-C9F00_RS03820;Name=C9F00_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03820;old_locus_tag=C9F00_03865
NZ_PYKC01000018.1	Protein Homology	CDS	25635	26678	.	-	0	ID=cds-WP_135369170.1;Parent=gene-C9F00_RS03820;Dbxref=GenBank:WP_135369170.1;Name=WP_135369170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9F00_RS03820;product=phage late control D family protein;protein_id=WP_135369170.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	26666	26875	.	-	.	ID=gene-C9F00_RS03825;Name=C9F00_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03825;old_locus_tag=C9F00_03870
NZ_PYKC01000018.1	Protein Homology	CDS	26666	26875	.	-	0	ID=cds-WP_001269716.1;Parent=gene-C9F00_RS03825;Dbxref=GenBank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9F00_RS03825;product=tail protein X;protein_id=WP_001269716.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	26875	27828	.	-	.	ID=gene-C9F00_RS03830;Name=C9F00_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03830;old_locus_tag=C9F00_03875
NZ_PYKC01000018.1	Protein Homology	CDS	26875	27828	.	-	0	ID=cds-WP_135369169.1;Parent=gene-C9F00_RS03830;Dbxref=GenBank:WP_135369169.1;Name=WP_135369169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9F00_RS03830;product=phage tail protein;protein_id=WP_135369169.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	27828	30179	.	-	.	ID=gene-C9F00_RS03835;Name=C9F00_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03835;old_locus_tag=C9F00_03880
NZ_PYKC01000018.1	Protein Homology	CDS	27828	30179	.	-	0	ID=cds-WP_135369168.1;Parent=gene-C9F00_RS03835;Dbxref=GenBank:WP_135369168.1;Name=WP_135369168.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F00_RS03835;product=phage tail tape measure protein;protein_id=WP_135369168.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	30276	30404	.	-	.	ID=gene-C9F00_RS24710;Name=C9F00_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24710;old_locus_tag=C9F00_03885
NZ_PYKC01000018.1	Protein Homology	CDS	30276	30404	.	-	0	ID=cds-WP_001185655.1;Parent=gene-C9F00_RS24710;Dbxref=GenBank:WP_001185655.1;Name=WP_001185655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9F00_RS24710;product=GpE family phage tail protein;protein_id=WP_001185655.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	30364	30681	.	-	.	ID=gene-C9F00_RS03845;Name=C9F00_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03845;old_locus_tag=C9F00_03890
NZ_PYKC01000018.1	Protein Homology	CDS	30364	30681	.	-	0	ID=cds-WP_001003642.1;Parent=gene-C9F00_RS03845;Dbxref=GenBank:WP_001003642.1;Name=WP_001003642.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9F00_RS03845;product=phage tail assembly protein;protein_id=WP_001003642.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	30733	31257	.	-	.	ID=gene-C9F00_RS03850;Name=C9F00_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03850;old_locus_tag=C9F00_03895
NZ_PYKC01000018.1	Protein Homology	CDS	30733	31257	.	-	0	ID=cds-WP_086811333.1;Parent=gene-C9F00_RS03850;Dbxref=GenBank:WP_086811333.1;Name=WP_086811333.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9F00_RS03850;product=phage major tail tube protein;protein_id=WP_086811333.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	31257	32681	.	-	.	ID=gene-C9F00_RS03855;Name=C9F00_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03855;old_locus_tag=C9F00_03900
NZ_PYKC01000018.1	Protein Homology	CDS	31257	32681	.	-	0	ID=cds-WP_000729842.1;Parent=gene-C9F00_RS03855;Dbxref=GenBank:WP_000729842.1;Name=WP_000729842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729842.1;locus_tag=C9F00_RS03855;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729842.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	32671	32868	.	-	.	ID=gene-C9F00_RS03860;Name=C9F00_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03860;old_locus_tag=C9F00_03905
NZ_PYKC01000018.1	Protein Homology	CDS	32671	32868	.	-	0	ID=cds-WP_000875314.1;Parent=gene-C9F00_RS03860;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9F00_RS03860;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	32865	33320	.	-	.	ID=gene-C9F00_RS03865;Name=C9F00_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03865;old_locus_tag=C9F00_03910
NZ_PYKC01000018.1	Protein Homology	CDS	32865	33320	.	-	0	ID=cds-WP_000449434.1;Parent=gene-C9F00_RS03865;Dbxref=GenBank:WP_000449434.1;Name=WP_000449434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9F00_RS03865;product=Gp37 family protein;protein_id=WP_000449434.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	33480	33794	.	-	.	ID=gene-C9F00_RS03870;Name=C9F00_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03870;old_locus_tag=C9F00_03915
NZ_PYKC01000018.1	Protein Homology	CDS	33480	33794	.	-	0	ID=cds-WP_000777267.1;Parent=gene-C9F00_RS03870;Dbxref=GenBank:WP_000777267.1;Name=WP_000777267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9F00_RS03870;product=hypothetical protein;protein_id=WP_000777267.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	33807	34412	.	-	.	ID=gene-C9F00_RS03875;Name=C9F00_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03875;old_locus_tag=C9F00_03920
NZ_PYKC01000018.1	Protein Homology	CDS	33807	34412	.	-	0	ID=cds-WP_135369167.1;Parent=gene-C9F00_RS03875;Dbxref=GenBank:WP_135369167.1;Name=WP_135369167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9F00_RS03875;product=lytic transglycosylase domain-containing protein;protein_id=WP_135369167.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	34415	34702	.	-	.	ID=gene-C9F00_RS03880;Name=C9F00_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03880;old_locus_tag=C9F00_03925
NZ_PYKC01000018.1	Protein Homology	CDS	34415	34702	.	-	0	ID=cds-WP_001226439.1;Parent=gene-C9F00_RS03880;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9F00_RS03880;product=putative holin;protein_id=WP_001226439.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	35279	35626	.	+	.	ID=gene-C9F00_RS03885;Name=C9F00_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03885;old_locus_tag=C9F00_03930
NZ_PYKC01000018.1	Protein Homology	CDS	35279	35626	.	+	0	ID=cds-WP_000615248.1;Parent=gene-C9F00_RS03885;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9F00_RS03885;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11
NZ_PYKC01000018.1	RefSeq	gene	35757	36727	.	-	.	ID=gene-C9F00_RS03890;Name=lysC;end_range=36727,.;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9F00_RS03890;old_locus_tag=C9F00_03935;partial=true
NZ_PYKC01000018.1	Protein Homology	CDS	35757	36727	.	-	2	ID=cds-WP_135492134.1;Parent=gene-C9F00_RS03890;Dbxref=GenBank:WP_135492134.1;Name=WP_135492134.1;Ontology_term=GO:0009089,GO:0004072;end_range=36727,.;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9F00_RS03890;partial=true;product=lysine-sensitive aspartokinase 3;protein_id=WP_135492134.1;transl_table=11
##sequence-region NZ_PYKC01000169.1 1 36575
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000169.1	RefSeq	region	1	36575	.	+	.	ID=NZ_PYKC01000169.1:1..36575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000169.1	RefSeq	gene	1	724	.	-	.	ID=gene-C9F00_RS23550;Name=C9F00_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23550;old_locus_tag=C9F00_24090;partial=true;start_range=.,1
NZ_PYKC01000169.1	Protein Homology	CDS	1	724	.	-	0	ID=cds-WP_245306402.1;Parent=gene-C9F00_RS23550;Dbxref=GenBank:WP_245306402.1;Name=WP_245306402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F00_RS23550;partial=true;product=aconitase family protein;protein_id=WP_245306402.1;start_range=.,1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	907	999	.	-	.	ID=gene-C9F00_RS24615;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=C9F00_RS24615
NZ_PYKC01000169.1	Protein Homology	CDS	907	999	.	-	0	ID=cds-WP_223148964.1;Parent=gene-C9F00_RS24615;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=C9F00_RS24615;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	1109	1279	.	-	.	ID=gene-C9F00_RS23555;Name=C9F00_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23555;old_locus_tag=C9F00_24095
NZ_PYKC01000169.1	Protein Homology	CDS	1109	1279	.	-	0	ID=cds-WP_000029027.1;Parent=gene-C9F00_RS23555;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=C9F00_RS23555;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	1280	1420	.	-	.	ID=gene-C9F00_RS23560;Name=C9F00_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23560;old_locus_tag=C9F00_24100
NZ_PYKC01000169.1	Protein Homology	CDS	1280	1420	.	-	0	ID=cds-WP_213083417.1;Parent=gene-C9F00_RS23560;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9F00_RS23560;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	1701	2675	.	-	.	ID=gene-C9F00_RS23565;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9F00_RS23565;old_locus_tag=C9F00_24105
NZ_PYKC01000169.1	Protein Homology	CDS	1701	2675	.	-	0	ID=cds-WP_000776233.1;Parent=gene-C9F00_RS23565;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9F00_RS23565;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	3086	5683	.	-	.	ID=gene-C9F00_RS23570;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9F00_RS23570;old_locus_tag=C9F00_24110
NZ_PYKC01000169.1	Protein Homology	CDS	3086	5683	.	-	0	ID=cds-WP_000513593.1;Parent=gene-C9F00_RS23570;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F00_RS23570;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	6086	6337	.	+	.	ID=gene-C9F00_RS23575;Name=C9F00_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23575;old_locus_tag=C9F00_24120
NZ_PYKC01000169.1	Protein Homology	CDS	6086	6337	.	+	0	ID=cds-WP_000548616.1;Parent=gene-C9F00_RS23575;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9F00_RS23575;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	6379	7425	.	-	.	ID=gene-C9F00_RS23580;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9F00_RS23580;old_locus_tag=C9F00_24125
NZ_PYKC01000169.1	Protein Homology	CDS	6379	7425	.	-	0	ID=cds-WP_000422084.1;Parent=gene-C9F00_RS23580;Dbxref=GenBank:WP_000422084.1;Name=WP_000422084.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9F00_RS23580;product=protease SohB;protein_id=WP_000422084.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	7663	8424	.	+	.	ID=gene-C9F00_RS23585;Name=C9F00_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23585;old_locus_tag=C9F00_24130
NZ_PYKC01000169.1	Protein Homology	CDS	7663	8424	.	+	0	ID=cds-WP_000559310.1;Parent=gene-C9F00_RS23585;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9F00_RS23585;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	8421	9011	.	+	.	ID=gene-C9F00_RS23590;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9F00_RS23590;old_locus_tag=C9F00_24135
NZ_PYKC01000169.1	Protein Homology	CDS	8421	9011	.	+	0	ID=cds-WP_001278865.1;Parent=gene-C9F00_RS23590;Dbxref=GenBank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9F00_RS23590;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	9098	9973	.	-	.	ID=gene-C9F00_RS23595;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9F00_RS23595;old_locus_tag=C9F00_24140
NZ_PYKC01000169.1	Protein Homology	CDS	9098	9973	.	-	0	ID=cds-WP_001291233.1;Parent=gene-C9F00_RS23595;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9F00_RS23595;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	10074	10694	.	-	.	ID=gene-C9F00_RS23600;Name=C9F00_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23600;old_locus_tag=C9F00_24145
NZ_PYKC01000169.1	Protein Homology	CDS	10074	10694	.	-	0	ID=cds-WP_135492565.1;Parent=gene-C9F00_RS23600;Dbxref=GenBank:WP_135492565.1;Name=WP_135492565.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F00_RS23600;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_135492565.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	10702	11583	.	-	.	ID=gene-C9F00_RS23605;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9F00_RS23605;old_locus_tag=C9F00_24150
NZ_PYKC01000169.1	Protein Homology	CDS	10702	11583	.	-	0	ID=cds-WP_061372244.1;Parent=gene-C9F00_RS23605;Dbxref=GenBank:WP_061372244.1;Name=WP_061372244.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9F00_RS23605;product=RNase RNM;protein_id=WP_061372244.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	11705	11749	.	+	.	ID=gene-C9F00_RS23610;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9F00_RS23610;old_locus_tag=C9F00_24155
NZ_PYKC01000169.1	Protein Homology	CDS	11705	11749	.	+	0	ID=cds-WP_010989026.1;Parent=gene-C9F00_RS23610;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9F00_RS23610;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11
NZ_PYKC01000169.1	cmsearch	sequence_feature	11726	11821	.	+	.	ID=id-NZ_PYKC01000169.1:11726..11821;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000169.1	RefSeq	gene	11844	13406	.	+	.	ID=gene-C9F00_RS23615;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=C9F00_RS23615;old_locus_tag=C9F00_24160
NZ_PYKC01000169.1	Protein Homology	CDS	11844	13406	.	+	0	ID=cds-WP_135369654.1;Parent=gene-C9F00_RS23615;Dbxref=GenBank:WP_135369654.1;Name=WP_135369654.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9F00_RS23615;product=anthranilate synthase component I;protein_id=WP_135369654.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	13406	15001	.	+	.	ID=gene-C9F00_RS23620;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9F00_RS23620;old_locus_tag=C9F00_24165
NZ_PYKC01000169.1	Protein Homology	CDS	13406	15001	.	+	0	ID=cds-WP_135492567.1;Parent=gene-C9F00_RS23620;Dbxref=GenBank:WP_135492567.1;Name=WP_135492567.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9F00_RS23620;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_135492567.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	15005	16363	.	+	.	ID=gene-C9F00_RS23625;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9F00_RS23625;old_locus_tag=C9F00_24170
NZ_PYKC01000169.1	Protein Homology	CDS	15005	16363	.	+	0	ID=cds-WP_023200821.1;Parent=gene-C9F00_RS23625;Dbxref=GenBank:WP_023200821.1;Name=WP_023200821.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9F00_RS23625;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_023200821.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	16373	17566	.	+	.	ID=gene-C9F00_RS23630;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9F00_RS23630;old_locus_tag=C9F00_24175
NZ_PYKC01000169.1	Protein Homology	CDS	16373	17566	.	+	0	ID=cds-WP_135492569.1;Parent=gene-C9F00_RS23630;Dbxref=GenBank:WP_135492569.1;Name=WP_135492569.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9F00_RS23630;product=tryptophan synthase subunit beta;protein_id=WP_135492569.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	17566	18372	.	+	.	ID=gene-C9F00_RS23635;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9F00_RS23635;old_locus_tag=C9F00_24180
NZ_PYKC01000169.1	Protein Homology	CDS	17566	18372	.	+	0	ID=cds-WP_058145069.1;Parent=gene-C9F00_RS23635;Dbxref=GenBank:WP_058145069.1;Name=WP_058145069.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9F00_RS23635;product=tryptophan synthase subunit alpha;protein_id=WP_058145069.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	18852	19034	.	+	.	ID=gene-C9F00_RS23640;Name=C9F00_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23640;old_locus_tag=C9F00_24185
NZ_PYKC01000169.1	Protein Homology	CDS	18852	19034	.	+	0	ID=cds-WP_000807657.1;Parent=gene-C9F00_RS23640;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9F00_RS23640;product=general stress protein;protein_id=WP_000807657.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	19124	19627	.	+	.	ID=gene-C9F00_RS23645;Name=C9F00_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23645;old_locus_tag=C9F00_24190
NZ_PYKC01000169.1	Protein Homology	CDS	19124	19627	.	+	0	ID=cds-WP_023219046.1;Parent=gene-C9F00_RS23645;Dbxref=GenBank:WP_023219046.1;Name=WP_023219046.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9F00_RS23645;product=ferritin-like domain-containing protein;protein_id=WP_023219046.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	19701	20207	.	+	.	ID=gene-C9F00_RS23650;Name=C9F00_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23650;old_locus_tag=C9F00_24195
NZ_PYKC01000169.1	Protein Homology	CDS	19701	20207	.	+	0	ID=cds-WP_001109977.1;Parent=gene-C9F00_RS23650;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9F00_RS23650;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	20227	21105	.	+	.	ID=gene-C9F00_RS23655;Name=C9F00_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23655;old_locus_tag=C9F00_24200
NZ_PYKC01000169.1	Protein Homology	CDS	20227	21105	.	+	0	ID=cds-WP_000488354.1;Parent=gene-C9F00_RS23655;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9F00_RS23655;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	21187	21825	.	-	.	ID=gene-C9F00_RS23660;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9F00_RS23660;old_locus_tag=C9F00_24205
NZ_PYKC01000169.1	Protein Homology	CDS	21187	21825	.	-	0	ID=cds-WP_000714799.1;Parent=gene-C9F00_RS23660;Dbxref=GenBank:WP_000714799.1;Name=WP_000714799.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9F00_RS23660;product=outer membrane protein OmpW;protein_id=WP_000714799.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	22162	22566	.	+	.	ID=gene-C9F00_RS23665;Name=C9F00_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23665;old_locus_tag=C9F00_24210
NZ_PYKC01000169.1	Protein Homology	CDS	22162	22566	.	+	0	ID=cds-WP_135369061.1;Parent=gene-C9F00_RS23665;Dbxref=GenBank:WP_135369061.1;Name=WP_135369061.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9F00_RS23665;product=YkgJ family cysteine cluster protein;protein_id=WP_135369061.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	22592	23335	.	+	.	ID=gene-C9F00_RS23670;Name=C9F00_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23670;old_locus_tag=C9F00_24215
NZ_PYKC01000169.1	Protein Homology	CDS	22592	23335	.	+	0	ID=cds-WP_000028507.1;Parent=gene-C9F00_RS23670;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9F00_RS23670;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	23392	23931	.	+	.	ID=gene-C9F00_RS23675;Name=C9F00_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23675;old_locus_tag=C9F00_24220
NZ_PYKC01000169.1	Protein Homology	CDS	23392	23931	.	+	0	ID=cds-WP_000808682.1;Parent=gene-C9F00_RS23675;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9F00_RS23675;product=septation protein A;protein_id=WP_000808682.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	24092	24493	.	+	.	ID=gene-C9F00_RS23680;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9F00_RS23680;old_locus_tag=C9F00_24225
NZ_PYKC01000169.1	Protein Homology	CDS	24092	24493	.	+	0	ID=cds-WP_000210317.1;Parent=gene-C9F00_RS23680;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9F00_RS23680;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	24553	25275	.	-	.	ID=gene-C9F00_RS23685;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9F00_RS23685;old_locus_tag=C9F00_24230
NZ_PYKC01000169.1	Protein Homology	CDS	24553	25275	.	-	0	ID=cds-WP_001531563.1;Parent=gene-C9F00_RS23685;Dbxref=GenBank:WP_001531563.1;Name=WP_001531563.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9F00_RS23685;product=TonB system transport protein TonB;protein_id=WP_001531563.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	25499	25795	.	+	.	ID=gene-C9F00_RS23690;Name=C9F00_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23690;old_locus_tag=C9F00_24235
NZ_PYKC01000169.1	Protein Homology	CDS	25499	25795	.	+	0	ID=cds-WP_000967605.1;Parent=gene-C9F00_RS23690;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9F00_RS23690;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	25839	26012	.	-	.	ID=gene-C9F00_RS23695;Name=C9F00_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23695
NZ_PYKC01000169.1	Protein Homology	CDS	25839	26012	.	-	0	ID=cds-WP_001531561.1;Parent=gene-C9F00_RS23695;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9F00_RS23695;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	26155	27615	.	+	.	ID=gene-C9F00_RS23700;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9F00_RS23700;old_locus_tag=C9F00_24240
NZ_PYKC01000169.1	Protein Homology	CDS	26155	27615	.	+	0	ID=cds-WP_000206886.1;Parent=gene-C9F00_RS23700;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9F00_RS23700;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	27649	27978	.	+	.	ID=gene-C9F00_RS23705;Name=C9F00_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23705;old_locus_tag=C9F00_24245
NZ_PYKC01000169.1	Protein Homology	CDS	27649	27978	.	+	0	ID=cds-WP_000425070.1;Parent=gene-C9F00_RS23705;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9F00_RS23705;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	28026	28862	.	-	.	ID=gene-C9F00_RS23710;Name=C9F00_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23710;old_locus_tag=C9F00_24250
NZ_PYKC01000169.1	Protein Homology	CDS	28026	28862	.	-	0	ID=cds-WP_000059071.1;Parent=gene-C9F00_RS23710;Dbxref=GenBank:WP_000059071.1;Name=WP_000059071.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9F00_RS23710;product=ion transporter;protein_id=WP_000059071.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	28910	29914	.	-	.	ID=gene-C9F00_RS23715;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9F00_RS23715;old_locus_tag=C9F00_24255
NZ_PYKC01000169.1	Protein Homology	CDS	28910	29914	.	-	0	ID=cds-WP_000994699.1;Parent=gene-C9F00_RS23715;Dbxref=GenBank:WP_000994699.1;Name=WP_000994699.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9F00_RS23715;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994699.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	29911	30918	.	-	.	ID=gene-C9F00_RS23720;Name=C9F00_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23720;old_locus_tag=C9F00_24260
NZ_PYKC01000169.1	Protein Homology	CDS	29911	30918	.	-	0	ID=cds-WP_000058857.1;Parent=gene-C9F00_RS23720;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9F00_RS23720;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	30930	31838	.	-	.	ID=gene-C9F00_RS23725;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9F00_RS23725;old_locus_tag=C9F00_24265
NZ_PYKC01000169.1	Protein Homology	CDS	30930	31838	.	-	0	ID=cds-WP_000979653.1;Parent=gene-C9F00_RS23725;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9F00_RS23725;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	31853	32773	.	-	.	ID=gene-C9F00_RS23730;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9F00_RS23730;old_locus_tag=C9F00_24270
NZ_PYKC01000169.1	Protein Homology	CDS	31853	32773	.	-	0	ID=cds-WP_000911097.1;Parent=gene-C9F00_RS23730;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9F00_RS23730;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	32895	34526	.	-	.	ID=gene-C9F00_RS23735;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9F00_RS23735;old_locus_tag=C9F00_24275
NZ_PYKC01000169.1	Protein Homology	CDS	32895	34526	.	-	0	ID=cds-WP_001521098.1;Parent=gene-C9F00_RS23735;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=C9F00_RS23735;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	gene	35290	35937	.	-	.	ID=gene-C9F00_RS23745;Name=C9F00_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23745;old_locus_tag=C9F00_24285
NZ_PYKC01000169.1	Protein Homology	CDS	35290	35937	.	-	0	ID=cds-WP_000615840.1;Parent=gene-C9F00_RS23745;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9F00_RS23745;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11
NZ_PYKC01000169.1	RefSeq	pseudogene	36414	36575	.	+	.	ID=gene-C9F00_RS24150;Name=C9F00_RS24150;end_range=36575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24150;partial=true;pseudo=true
NZ_PYKC01000169.1	Protein Homology	CDS	36414	36575	.	+	0	ID=cds-C9F00_RS24150;Parent=gene-C9F00_RS24150;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=36575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=C9F00_RS24150;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000100.1 1 36161
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000100.1	RefSeq	region	1	36161	.	+	.	ID=NZ_PYKC01000100.1:1..36161;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000100.1	RefSeq	pseudogene	1	401	.	-	.	ID=gene-C9F00_RS16175;Name=C9F00_RS16175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS16175;old_locus_tag=C9F00_16565;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000100.1	Protein Homology	CDS	1	401	.	-	0	ID=cds-C9F00_RS16175;Parent=gene-C9F00_RS16175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F00_RS16175;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	388	975	.	-	.	ID=gene-C9F00_RS16180;Name=C9F00_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16180;old_locus_tag=C9F00_16570
NZ_PYKC01000100.1	Protein Homology	CDS	388	975	.	-	0	ID=cds-WP_135369403.1;Parent=gene-C9F00_RS16180;Dbxref=GenBank:WP_135369403.1;Name=WP_135369403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=C9F00_RS16180;product=YmfQ family protein;protein_id=WP_135369403.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	978	2057	.	-	.	ID=gene-C9F00_RS16185;Name=C9F00_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16185;old_locus_tag=C9F00_16575
NZ_PYKC01000100.1	Protein Homology	CDS	978	2057	.	-	0	ID=cds-WP_135369402.1;Parent=gene-C9F00_RS16185;Dbxref=GenBank:WP_135369402.1;Name=WP_135369402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=C9F00_RS16185;product=baseplate J/gp47 family protein;protein_id=WP_135369402.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	2050	2463	.	-	.	ID=gene-C9F00_RS16190;Name=C9F00_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16190;old_locus_tag=C9F00_16580
NZ_PYKC01000100.1	Protein Homology	CDS	2050	2463	.	-	0	ID=cds-WP_000605051.1;Parent=gene-C9F00_RS16190;Dbxref=GenBank:WP_000605051.1;Name=WP_000605051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=C9F00_RS16190;product=phage GP46 family protein;protein_id=WP_000605051.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	2468	3001	.	-	.	ID=gene-C9F00_RS16195;Name=C9F00_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16195;old_locus_tag=C9F00_16585
NZ_PYKC01000100.1	Protein Homology	CDS	2468	3001	.	-	0	ID=cds-WP_001273647.1;Parent=gene-C9F00_RS16195;Dbxref=GenBank:WP_001273647.1;Name=WP_001273647.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=C9F00_RS16195;product=phage baseplate assembly protein V;protein_id=WP_001273647.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	3001	4059	.	-	.	ID=gene-C9F00_RS16200;Name=C9F00_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16200;old_locus_tag=C9F00_16590
NZ_PYKC01000100.1	Protein Homology	CDS	3001	4059	.	-	0	ID=cds-WP_135369401.1;Parent=gene-C9F00_RS16200;Dbxref=GenBank:WP_135369401.1;Name=WP_135369401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=C9F00_RS16200;product=phage baseplate assembly protein;protein_id=WP_135369401.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	4056	5396	.	-	.	ID=gene-C9F00_RS16205;Name=C9F00_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16205;old_locus_tag=C9F00_16595
NZ_PYKC01000100.1	Protein Homology	CDS	4056	5396	.	-	0	ID=cds-WP_135369400.1;Parent=gene-C9F00_RS16205;Dbxref=GenBank:WP_135369400.1;Name=WP_135369400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=C9F00_RS16205;product=DNA circularization protein;protein_id=WP_135369400.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	5456	5905	.	-	.	ID=gene-C9F00_RS16210;Name=C9F00_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16210;old_locus_tag=C9F00_16600
NZ_PYKC01000100.1	Protein Homology	CDS	5456	5905	.	-	0	ID=cds-WP_001033736.1;Parent=gene-C9F00_RS16210;Dbxref=GenBank:WP_001033736.1;Name=WP_001033736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033736.1;locus_tag=C9F00_RS16210;product=hypothetical protein;protein_id=WP_001033736.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	5922	7847	.	-	.	ID=gene-C9F00_RS16215;Name=C9F00_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16215;old_locus_tag=C9F00_16605
NZ_PYKC01000100.1	Protein Homology	CDS	5922	7847	.	-	0	ID=cds-WP_135492390.1;Parent=gene-C9F00_RS16215;Dbxref=GenBank:WP_135492390.1;Name=WP_135492390.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785382.1;locus_tag=C9F00_RS16215;product=phage tail tape measure protein;protein_id=WP_135492390.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	7932	8258	.	-	.	ID=gene-C9F00_RS16220;Name=C9F00_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16220;old_locus_tag=C9F00_16610
NZ_PYKC01000100.1	Protein Homology	CDS	7932	8258	.	-	0	ID=cds-WP_000588852.1;Parent=gene-C9F00_RS16220;Dbxref=GenBank:WP_000588852.1;Name=WP_000588852.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588853.1;locus_tag=C9F00_RS16220;product=phage tail assembly protein;protein_id=WP_000588852.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	8255	8611	.	-	.	ID=gene-C9F00_RS16225;Name=C9F00_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16225;old_locus_tag=C9F00_16615
NZ_PYKC01000100.1	Protein Homology	CDS	8255	8611	.	-	0	ID=cds-WP_000515952.1;Parent=gene-C9F00_RS16225;Dbxref=GenBank:WP_000515952.1;Name=WP_000515952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=C9F00_RS16225;product=phage tail tube protein;protein_id=WP_000515952.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	8611	10107	.	-	.	ID=gene-C9F00_RS16230;Name=C9F00_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16230;old_locus_tag=C9F00_16620
NZ_PYKC01000100.1	Protein Homology	CDS	8611	10107	.	-	0	ID=cds-WP_135369398.1;Parent=gene-C9F00_RS16230;Dbxref=GenBank:WP_135369398.1;Name=WP_135369398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=C9F00_RS16230;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_135369398.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	10097	10261	.	-	.	ID=gene-C9F00_RS16235;Name=C9F00_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16235;old_locus_tag=C9F00_16625
NZ_PYKC01000100.1	Protein Homology	CDS	10097	10261	.	-	0	ID=cds-WP_023210465.1;Parent=gene-C9F00_RS16235;Dbxref=GenBank:WP_023210465.1;Name=WP_023210465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=C9F00_RS16235;product=DUF2635 domain-containing protein;protein_id=WP_023210465.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	10265	10825	.	-	.	ID=gene-C9F00_RS16240;Name=C9F00_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16240;old_locus_tag=C9F00_16630
NZ_PYKC01000100.1	Protein Homology	CDS	10265	10825	.	-	0	ID=cds-WP_023210466.1;Parent=gene-C9F00_RS16240;Dbxref=GenBank:WP_023210466.1;Name=WP_023210466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=C9F00_RS16240;product=phage tail terminator protein;protein_id=WP_023210466.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	10822	11334	.	-	.	ID=gene-C9F00_RS16245;Name=C9F00_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16245;old_locus_tag=C9F00_16635
NZ_PYKC01000100.1	Protein Homology	CDS	10822	11334	.	-	0	ID=cds-WP_001135697.1;Parent=gene-C9F00_RS16245;Dbxref=GenBank:WP_001135697.1;Name=WP_001135697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=C9F00_RS16245;product=hypothetical protein;protein_id=WP_001135697.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	11306	11710	.	-	.	ID=gene-C9F00_RS16250;Name=C9F00_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16250;old_locus_tag=C9F00_16640
NZ_PYKC01000100.1	Protein Homology	CDS	11306	11710	.	-	0	ID=cds-WP_000702409.1;Parent=gene-C9F00_RS16250;Dbxref=GenBank:WP_000702409.1;Name=WP_000702409.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702408.1;locus_tag=C9F00_RS16250;product=phage head closure protein;protein_id=WP_000702409.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	11707	12030	.	-	.	ID=gene-C9F00_RS16255;Name=C9F00_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16255;old_locus_tag=C9F00_16645
NZ_PYKC01000100.1	Protein Homology	CDS	11707	12030	.	-	0	ID=cds-WP_000927378.1;Parent=gene-C9F00_RS16255;Dbxref=GenBank:WP_000927378.1;Name=WP_000927378.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=C9F00_RS16255;product=head-tail connector protein;protein_id=WP_000927378.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	12033	12233	.	-	.	ID=gene-C9F00_RS16260;Name=C9F00_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16260;old_locus_tag=C9F00_16650
NZ_PYKC01000100.1	Protein Homology	CDS	12033	12233	.	-	0	ID=cds-WP_000601353.1;Parent=gene-C9F00_RS16260;Dbxref=GenBank:WP_000601353.1;Name=WP_000601353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=C9F00_RS16260;product=hypothetical protein;protein_id=WP_000601353.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	12284	13489	.	-	.	ID=gene-C9F00_RS16265;Name=C9F00_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16265;old_locus_tag=C9F00_16655
NZ_PYKC01000100.1	Protein Homology	CDS	12284	13489	.	-	0	ID=cds-WP_135492392.1;Parent=gene-C9F00_RS16265;Dbxref=GenBank:WP_135492392.1;Name=WP_135492392.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=C9F00_RS16265;product=phage major capsid protein;protein_id=WP_135492392.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	13504	14154	.	-	.	ID=gene-C9F00_RS16270;Name=C9F00_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16270;old_locus_tag=C9F00_16660
NZ_PYKC01000100.1	Protein Homology	CDS	13504	14154	.	-	0	ID=cds-WP_001193639.1;Parent=gene-C9F00_RS16270;Dbxref=GenBank:WP_001193639.1;Name=WP_001193639.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=C9F00_RS16270;product=HK97 family phage prohead protease;protein_id=WP_001193639.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	14132	15373	.	-	.	ID=gene-C9F00_RS16275;Name=C9F00_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16275;old_locus_tag=C9F00_16665
NZ_PYKC01000100.1	Protein Homology	CDS	14132	15373	.	-	0	ID=cds-WP_135369397.1;Parent=gene-C9F00_RS16275;Dbxref=GenBank:WP_135369397.1;Name=WP_135369397.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=C9F00_RS16275;product=phage portal protein;protein_id=WP_135369397.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	15373	15555	.	-	.	ID=gene-C9F00_RS16280;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=C9F00_RS16280;old_locus_tag=C9F00_16670
NZ_PYKC01000100.1	Protein Homology	CDS	15373	15555	.	-	0	ID=cds-WP_000605609.1;Parent=gene-C9F00_RS16280;Dbxref=GenBank:WP_000605609.1;Name=WP_000605609.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=C9F00_RS16280;product=protein YmfR;protein_id=WP_000605609.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	15567	17300	.	-	.	ID=gene-C9F00_RS16285;Name=C9F00_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16285;old_locus_tag=C9F00_16675
NZ_PYKC01000100.1	Protein Homology	CDS	15567	17300	.	-	0	ID=cds-WP_000088184.1;Parent=gene-C9F00_RS16285;Dbxref=GenBank:WP_000088184.1;Name=WP_000088184.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=C9F00_RS16285;product=terminase large subunit;protein_id=WP_000088184.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	17297	17791	.	-	.	ID=gene-C9F00_RS16290;Name=C9F00_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16290;old_locus_tag=C9F00_16680
NZ_PYKC01000100.1	Protein Homology	CDS	17297	17791	.	-	0	ID=cds-WP_000929191.1;Parent=gene-C9F00_RS16290;Dbxref=GenBank:WP_000929191.1;Name=WP_000929191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=C9F00_RS16290;product=phage terminase small subunit P27 family;protein_id=WP_000929191.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	17916	18266	.	-	.	ID=gene-C9F00_RS16295;Name=C9F00_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16295;old_locus_tag=C9F00_16685
NZ_PYKC01000100.1	Protein Homology	CDS	17916	18266	.	-	0	ID=cds-WP_079810073.1;Parent=gene-C9F00_RS16295;Dbxref=GenBank:WP_079810073.1;Name=WP_079810073.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=C9F00_RS16295;product=HNH endonuclease;protein_id=WP_079810073.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	18313	18819	.	-	.	ID=gene-C9F00_RS16300;Name=C9F00_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16300;old_locus_tag=C9F00_16690
NZ_PYKC01000100.1	GeneMarkS-2+	CDS	18313	18819	.	-	0	ID=cds-WP_135369396.1;Parent=gene-C9F00_RS16300;Dbxref=GenBank:WP_135369396.1;Name=WP_135369396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS16300;product=hypothetical protein;protein_id=WP_135369396.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	18885	19046	.	-	.	ID=gene-C9F00_RS24855;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9F00_RS24855
NZ_PYKC01000100.1	Protein Homology	CDS	18885	19046	.	-	0	ID=cds-WP_420197019.1;Parent=gene-C9F00_RS24855;Dbxref=GenBank:WP_420197019.1;Name=WP_420197019.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=C9F00_RS24855;product=Rz1-like lysis system protein LysC;protein_id=WP_420197019.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	18976	19410	.	-	.	ID=gene-C9F00_RS16305;Name=C9F00_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16305;old_locus_tag=C9F00_16695
NZ_PYKC01000100.1	Protein Homology	CDS	18976	19410	.	-	0	ID=cds-WP_079810071.1;Parent=gene-C9F00_RS16305;Dbxref=GenBank:WP_079810071.1;Name=WP_079810071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778467.1;locus_tag=C9F00_RS16305;product=DUF2570 domain-containing protein;protein_id=WP_079810071.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	19394	19870	.	-	.	ID=gene-C9F00_RS16310;Name=C9F00_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16310;old_locus_tag=C9F00_16700
NZ_PYKC01000100.1	Protein Homology	CDS	19394	19870	.	-	0	ID=cds-WP_079810070.1;Parent=gene-C9F00_RS16310;Dbxref=GenBank:WP_079810070.1;Name=WP_079810070.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159277.1;locus_tag=C9F00_RS16310;product=glycoside hydrolase family 24 protein;protein_id=WP_079810070.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	19874	20209	.	-	.	ID=gene-C9F00_RS16315;Name=C9F00_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16315;old_locus_tag=C9F00_16705
NZ_PYKC01000100.1	Protein Homology	CDS	19874	20209	.	-	0	ID=cds-WP_023219695.1;Parent=gene-C9F00_RS16315;Dbxref=GenBank:WP_023219695.1;Name=WP_023219695.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120500.1;locus_tag=C9F00_RS16315;product=phage holin%2C lambda family;protein_id=WP_023219695.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	20506	21837	.	+	.	ID=gene-C9F00_RS16320;Name=C9F00_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16320;old_locus_tag=C9F00_16710
NZ_PYKC01000100.1	Protein Homology	CDS	20506	21837	.	+	0	ID=cds-WP_135420236.1;Parent=gene-C9F00_RS16320;Dbxref=GenBank:WP_135420236.1;Name=WP_135420236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=C9F00_RS16320;product=KAP family NTPase;protein_id=WP_135420236.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	21866	22234	.	-	.	ID=gene-C9F00_RS16325;Name=C9F00_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16325;old_locus_tag=C9F00_16715
NZ_PYKC01000100.1	Protein Homology	CDS	21866	22234	.	-	0	ID=cds-WP_135369300.1;Parent=gene-C9F00_RS16325;Dbxref=GenBank:WP_135369300.1;Name=WP_135369300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=C9F00_RS16325;product=antiterminator Q family protein;protein_id=WP_135369300.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	22249	23238	.	-	.	ID=gene-C9F00_RS16330;Name=C9F00_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16330;old_locus_tag=C9F00_16720
NZ_PYKC01000100.1	Protein Homology	CDS	22249	23238	.	-	0	ID=cds-WP_135369299.1;Parent=gene-C9F00_RS16330;Dbxref=GenBank:WP_135369299.1;Name=WP_135369299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=C9F00_RS16330;product=DUF968 domain-containing protein;protein_id=WP_135369299.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	23246	24106	.	-	.	ID=gene-C9F00_RS16335;Name=C9F00_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16335;old_locus_tag=C9F00_16725
NZ_PYKC01000100.1	Protein Homology	CDS	23246	24106	.	-	0	ID=cds-WP_135369301.1;Parent=gene-C9F00_RS16335;Dbxref=GenBank:WP_135369301.1;Name=WP_135369301.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=C9F00_RS16335;product=KilA-N domain-containing protein;protein_id=WP_135369301.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	24123	24512	.	-	.	ID=gene-C9F00_RS16340;Name=C9F00_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16340;old_locus_tag=C9F00_16730
NZ_PYKC01000100.1	Protein Homology	CDS	24123	24512	.	-	0	ID=cds-WP_135369298.1;Parent=gene-C9F00_RS16340;Dbxref=GenBank:WP_135369298.1;Name=WP_135369298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=C9F00_RS16340;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_135369298.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	24509	26443	.	-	.	ID=gene-C9F00_RS16345;Name=C9F00_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16345;old_locus_tag=C9F00_16735
NZ_PYKC01000100.1	Protein Homology	CDS	24509	26443	.	-	0	ID=cds-WP_135369297.1;Parent=gene-C9F00_RS16345;Dbxref=GenBank:WP_135369297.1;Name=WP_135369297.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=C9F00_RS16345;product=DNA cytosine methyltransferase;protein_id=WP_135369297.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	26436	27314	.	-	.	ID=gene-C9F00_RS16350;Name=C9F00_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16350;old_locus_tag=C9F00_16740
NZ_PYKC01000100.1	Protein Homology	CDS	26436	27314	.	-	0	ID=cds-WP_046722474.1;Parent=gene-C9F00_RS16350;Dbxref=GenBank:WP_046722474.1;Name=WP_046722474.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762302.1;locus_tag=C9F00_RS16350;product=phage N-6-adenine-methyltransferase;protein_id=WP_046722474.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	27314	27796	.	-	.	ID=gene-C9F00_RS16355;Name=C9F00_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16355;old_locus_tag=C9F00_16745
NZ_PYKC01000100.1	Protein Homology	CDS	27314	27796	.	-	0	ID=cds-WP_001669427.1;Parent=gene-C9F00_RS16355;Dbxref=GenBank:WP_001669427.1;Name=WP_001669427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531318.1;locus_tag=C9F00_RS16355;product=PerC family transcriptional regulator;protein_id=WP_001669427.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	27798	28727	.	-	.	ID=gene-C9F00_RS16360;Name=C9F00_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16360;old_locus_tag=C9F00_16750
NZ_PYKC01000100.1	Protein Homology	CDS	27798	28727	.	-	0	ID=cds-WP_135369296.1;Parent=gene-C9F00_RS16360;Dbxref=GenBank:WP_135369296.1;Name=WP_135369296.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=C9F00_RS16360;product=helix-turn-helix domain-containing protein;protein_id=WP_135369296.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	28724	28948	.	-	.	ID=gene-C9F00_RS16365;Name=C9F00_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16365;old_locus_tag=C9F00_16755
NZ_PYKC01000100.1	Protein Homology	CDS	28724	28948	.	-	0	ID=cds-WP_000620702.1;Parent=gene-C9F00_RS16365;Dbxref=GenBank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=C9F00_RS16365;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	28945	30102	.	-	.	ID=gene-C9F00_RS16370;Name=C9F00_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16370;old_locus_tag=C9F00_16760
NZ_PYKC01000100.1	Protein Homology	CDS	28945	30102	.	-	0	ID=cds-WP_135369295.1;Parent=gene-C9F00_RS16370;Dbxref=GenBank:WP_135369295.1;Name=WP_135369295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=C9F00_RS16370;product=Rha family phage regulatory protein;protein_id=WP_135369295.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	30099	30653	.	-	.	ID=gene-C9F00_RS16375;Name=C9F00_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16375;old_locus_tag=C9F00_16765
NZ_PYKC01000100.1	Protein Homology	CDS	30099	30653	.	-	0	ID=cds-WP_000509731.1;Parent=gene-C9F00_RS16375;Dbxref=GenBank:WP_000509731.1;Name=WP_000509731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=C9F00_RS16375;product=YmfL family putative regulatory protein;protein_id=WP_000509731.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	30682	30906	.	-	.	ID=gene-C9F00_RS16380;Name=C9F00_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16380;old_locus_tag=C9F00_16770
NZ_PYKC01000100.1	Protein Homology	CDS	30682	30906	.	-	0	ID=cds-WP_001191666.1;Parent=gene-C9F00_RS16380;Dbxref=GenBank:WP_001191666.1;Name=WP_001191666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=C9F00_RS16380;product=helix-turn-helix domain-containing protein;protein_id=WP_001191666.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	31004	31699	.	+	.	ID=gene-C9F00_RS16390;Name=C9F00_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16390;old_locus_tag=C9F00_16780
NZ_PYKC01000100.1	Protein Homology	CDS	31004	31699	.	+	0	ID=cds-WP_001020640.1;Parent=gene-C9F00_RS16390;Dbxref=GenBank:WP_001020640.1;Name=WP_001020640.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=C9F00_RS16390;product=XRE family transcriptional regulator;protein_id=WP_001020640.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	32513	32884	.	+	.	ID=gene-C9F00_RS16395;Name=C9F00_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16395;old_locus_tag=C9F00_16790
NZ_PYKC01000100.1	Protein Homology	CDS	32513	32884	.	+	0	ID=cds-WP_000997190.1;Parent=gene-C9F00_RS16395;Dbxref=GenBank:WP_000997190.1;Name=WP_000997190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=C9F00_RS16395;product=hypothetical protein;protein_id=WP_000997190.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	32942	33769	.	+	.	ID=gene-C9F00_RS16400;Name=C9F00_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16400;old_locus_tag=C9F00_16795
NZ_PYKC01000100.1	Protein Homology	CDS	32942	33769	.	+	0	ID=cds-WP_000080410.1;Parent=gene-C9F00_RS16400;Dbxref=GenBank:WP_000080410.1;Name=WP_000080410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=C9F00_RS16400;product=YfdQ family protein;protein_id=WP_000080410.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	33906	34445	.	+	.	ID=gene-C9F00_RS16405;Name=C9F00_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16405;old_locus_tag=C9F00_16800
NZ_PYKC01000100.1	Protein Homology	CDS	33906	34445	.	+	0	ID=cds-WP_000008352.1;Parent=gene-C9F00_RS16405;Dbxref=GenBank:WP_000008352.1;Name=WP_000008352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120458.1;locus_tag=C9F00_RS16405;product=hypothetical protein;protein_id=WP_000008352.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	34589	34825	.	+	.	ID=gene-C9F00_RS16410;Name=C9F00_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16410;old_locus_tag=C9F00_16805
NZ_PYKC01000100.1	Protein Homology	CDS	34589	34825	.	+	0	ID=cds-WP_000089141.1;Parent=gene-C9F00_RS16410;Dbxref=GenBank:WP_000089141.1;Name=WP_000089141.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=C9F00_RS16410;product=excisionase;protein_id=WP_000089141.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	34815	35957	.	+	.	ID=gene-C9F00_RS16415;Name=C9F00_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16415;old_locus_tag=C9F00_16810
NZ_PYKC01000100.1	Protein Homology	CDS	34815	35957	.	+	0	ID=cds-WP_000741325.1;Parent=gene-C9F00_RS16415;Dbxref=GenBank:WP_000741325.1;Name=WP_000741325.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=C9F00_RS16415;product=site-specific integrase;protein_id=WP_000741325.1;transl_table=11
NZ_PYKC01000100.1	RefSeq	gene	36071	36161	.	-	.	ID=gene-C9F00_RS16420;Name=C9F00_RS16420;end_range=36161,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16420;old_locus_tag=C9F00_16815;partial=true
NZ_PYKC01000100.1	Protein Homology	CDS	36071	36161	.	-	1	ID=cds-WP_135492394.1;Parent=gene-C9F00_RS16420;Dbxref=GenBank:WP_135492394.1;Name=WP_135492394.1;end_range=36161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F00_RS16420;partial=true;product=isocitrate dehydrogenase;protein_id=WP_135492394.1;transl_table=11
##sequence-region NZ_PYKC01000172.1 1 461
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000172.1	RefSeq	region	1	461	.	+	.	ID=NZ_PYKC01000172.1:1..461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000172.1	RefSeq	pseudogene	1	371	.	+	.	ID=gene-C9F00_RS23855;Name=C9F00_RS23855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23855;old_locus_tag=C9F00_24410;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000172.1	Protein Homology	CDS	1	371	.	+	2	ID=cds-C9F00_RS23855;Parent=gene-C9F00_RS23855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9F00_RS23855;partial=true;product=TRAM domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000158.1 1 457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000158.1	RefSeq	region	1	457	.	+	.	ID=NZ_PYKC01000158.1:1..457;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000158.1	RefSeq	pseudogene	1	457	.	+	.	ID=gene-C9F00_RS24240;Name=C9F00_RS24240;end_range=457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24240;old_locus_tag=C9F00_23900;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000158.1	Protein Homology	CDS	1	457	.	+	2	ID=cds-C9F00_RS24240;Parent=gene-C9F00_RS24240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176305.1;locus_tag=C9F00_RS24240;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000012.1 1 34368
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000012.1	RefSeq	region	1	34368	.	+	.	ID=NZ_PYKC01000012.1:1..34368;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000012.1	RefSeq	gene	1	668	.	-	.	ID=gene-C9F00_RS02805;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9F00_RS02805;old_locus_tag=C9F00_02850;partial=true;start_range=.,1
NZ_PYKC01000012.1	Protein Homology	CDS	1	668	.	-	0	ID=cds-WP_135492112.1;Parent=gene-C9F00_RS02805;Dbxref=GenBank:WP_135492112.1;Name=WP_135492112.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114411.1;locus_tag=C9F00_RS02805;partial=true;product=cytoskeleton protein RodZ;protein_id=WP_135492112.1;start_range=.,1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	960	2126	.	-	.	ID=gene-C9F00_RS02810;Name=C9F00_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02810;old_locus_tag=C9F00_02860
NZ_PYKC01000012.1	Protein Homology	CDS	960	2126	.	-	0	ID=cds-WP_000003206.1;Parent=gene-C9F00_RS02810;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9F00_RS02810;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	2332	2763	.	-	.	ID=gene-C9F00_RS02815;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9F00_RS02815;old_locus_tag=C9F00_02865
NZ_PYKC01000012.1	Protein Homology	CDS	2332	2763	.	-	0	ID=cds-WP_000963846.1;Parent=gene-C9F00_RS02815;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9F00_RS02815;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	2884	3747	.	-	.	ID=gene-C9F00_RS02820;Name=C9F00_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02820;old_locus_tag=C9F00_02870
NZ_PYKC01000012.1	Protein Homology	CDS	2884	3747	.	-	0	ID=cds-WP_135369742.1;Parent=gene-C9F00_RS02820;Dbxref=GenBank:WP_135369742.1;Name=WP_135369742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9F00_RS02820;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_135369742.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	3747	4556	.	-	.	ID=gene-C9F00_RS02825;Name=C9F00_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02825;old_locus_tag=C9F00_02875
NZ_PYKC01000012.1	Protein Homology	CDS	3747	4556	.	-	0	ID=cds-WP_135369743.1;Parent=gene-C9F00_RS02825;Dbxref=GenBank:WP_135369743.1;Name=WP_135369743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9F00_RS02825;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369743.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	4549	5178	.	-	.	ID=gene-C9F00_RS02830;Name=C9F00_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02830;old_locus_tag=C9F00_02880
NZ_PYKC01000012.1	Protein Homology	CDS	4549	5178	.	-	0	ID=cds-WP_135369744.1;Parent=gene-C9F00_RS02830;Dbxref=GenBank:WP_135369744.1;Name=WP_135369744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9F00_RS02830;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_135369744.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	5175	7553	.	-	.	ID=gene-C9F00_RS02835;Name=C9F00_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02835;old_locus_tag=C9F00_02885
NZ_PYKC01000012.1	Protein Homology	CDS	5175	7553	.	-	0	ID=cds-WP_348628781.1;Parent=gene-C9F00_RS02835;Dbxref=GenBank:WP_348628781.1;Name=WP_348628781.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=C9F00_RS02835;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_348628781.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	7708	10023	.	-	.	ID=gene-C9F00_RS02840;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9F00_RS02840;old_locus_tag=C9F00_02890
NZ_PYKC01000012.1	Protein Homology	CDS	7708	10023	.	-	0	ID=cds-WP_135420176.1;Parent=gene-C9F00_RS02840;Dbxref=GenBank:WP_135420176.1;Name=WP_135420176.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F00_RS02840;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_135420176.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	10024	14958	.	-	.	ID=gene-C9F00_RS02845;Name=C9F00_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02845;old_locus_tag=C9F00_02895
NZ_PYKC01000012.1	Protein Homology	CDS	10024	14958	.	-	0	ID=cds-WP_135369303.1;Parent=gene-C9F00_RS02845;Dbxref=GenBank:WP_135369303.1;Name=WP_135369303.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9F00_RS02845;product=alpha-2-macroglobulin family protein;protein_id=WP_135369303.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	15167	16009	.	+	.	ID=gene-C9F00_RS02850;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F00_RS02850;old_locus_tag=C9F00_02900
NZ_PYKC01000012.1	Protein Homology	CDS	15167	16009	.	+	0	ID=cds-WP_135369304.1;Parent=gene-C9F00_RS02850;Dbxref=GenBank:WP_135369304.1;Name=WP_135369304.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9F00_RS02850;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_135369304.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	15989	16213	.	-	.	ID=gene-C9F00_RS24035;Name=C9F00_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24035
NZ_PYKC01000012.1	Protein Homology	CDS	15989	16213	.	-	0	ID=cds-WP_000851099.1;Parent=gene-C9F00_RS24035;Dbxref=GenBank:WP_000851099.1;Name=WP_000851099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9F00_RS24035;product=hypothetical protein;protein_id=WP_000851099.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	16256	16924	.	+	.	ID=gene-C9F00_RS02855;Name=C9F00_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02855;old_locus_tag=C9F00_02905
NZ_PYKC01000012.1	Protein Homology	CDS	16256	16924	.	+	0	ID=cds-WP_000355298.1;Parent=gene-C9F00_RS02855;Dbxref=GenBank:WP_000355298.1;Name=WP_000355298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9F00_RS02855;product=DUF5066 family protein;protein_id=WP_000355298.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	17340	17456	.	+	.	ID=gene-C9F00_RS24770;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=C9F00_RS24770
NZ_PYKC01000012.1	Protein Homology	CDS	17340	17456	.	+	0	ID=cds-WP_350028759.1;Parent=gene-C9F00_RS24770;Dbxref=GenBank:WP_350028759.1;Name=WP_350028759.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=C9F00_RS24770;product=small toxic inner membrane protein TimP;protein_id=WP_350028759.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	17493	18269	.	-	.	ID=gene-C9F00_RS02865;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9F00_RS02865;old_locus_tag=C9F00_02915
NZ_PYKC01000012.1	Protein Homology	CDS	17493	18269	.	-	0	ID=cds-WP_001522413.1;Parent=gene-C9F00_RS02865;Dbxref=GenBank:WP_001522413.1;Name=WP_001522413.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9F00_RS02865;product=enhanced serine sensitivity protein SseB;protein_id=WP_001522413.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	18379	19662	.	-	.	ID=gene-C9F00_RS02870;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9F00_RS02870;old_locus_tag=C9F00_02925
NZ_PYKC01000012.1	Protein Homology	CDS	18379	19662	.	-	0	ID=cds-WP_000133541.1;Parent=gene-C9F00_RS02870;Dbxref=GenBank:WP_000133541.1;Name=WP_000133541.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9F00_RS02870;product=aminopeptidase PepB;protein_id=WP_000133541.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	19716	19916	.	-	.	ID=gene-C9F00_RS02875;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9F00_RS02875;old_locus_tag=C9F00_02930
NZ_PYKC01000012.1	Protein Homology	CDS	19716	19916	.	-	0	ID=cds-WP_000523621.1;Parent=gene-C9F00_RS02875;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9F00_RS02875;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	19928	20263	.	-	.	ID=gene-C9F00_RS02880;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9F00_RS02880;old_locus_tag=C9F00_02935
NZ_PYKC01000012.1	Protein Homology	CDS	19928	20263	.	-	0	ID=cds-WP_001124466.1;Parent=gene-C9F00_RS02880;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9F00_RS02880;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	20265	22115	.	-	.	ID=gene-C9F00_RS02885;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F00_RS02885;old_locus_tag=C9F00_02940
NZ_PYKC01000012.1	Protein Homology	CDS	20265	22115	.	-	0	ID=cds-WP_135369305.1;Parent=gene-C9F00_RS02885;Dbxref=GenBank:WP_135369305.1;Name=WP_135369305.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F00_RS02885;product=Fe-S protein assembly chaperone HscA;protein_id=WP_135369305.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	22128	22643	.	-	.	ID=gene-C9F00_RS02890;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9F00_RS02890;old_locus_tag=C9F00_02945
NZ_PYKC01000012.1	Protein Homology	CDS	22128	22643	.	-	0	ID=cds-WP_000384398.1;Parent=gene-C9F00_RS02890;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9F00_RS02890;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	22839	23162	.	-	.	ID=gene-C9F00_RS02895;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9F00_RS02895;old_locus_tag=C9F00_02950
NZ_PYKC01000012.1	Protein Homology	CDS	22839	23162	.	-	0	ID=cds-WP_000028952.1;Parent=gene-C9F00_RS02895;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9F00_RS02895;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	23191	23577	.	-	.	ID=gene-C9F00_RS02900;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9F00_RS02900;old_locus_tag=C9F00_02955
NZ_PYKC01000012.1	Protein Homology	CDS	23191	23577	.	-	0	ID=cds-WP_000331704.1;Parent=gene-C9F00_RS02900;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9F00_RS02900;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	23605	24819	.	-	.	ID=gene-C9F00_RS02905;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9F00_RS02905;old_locus_tag=C9F00_02960
NZ_PYKC01000012.1	Protein Homology	CDS	23605	24819	.	-	0	ID=cds-WP_000775263.1;Parent=gene-C9F00_RS02905;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9F00_RS02905;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	25000	25494	.	-	.	ID=gene-C9F00_RS02910;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9F00_RS02910;old_locus_tag=C9F00_02965
NZ_PYKC01000012.1	Protein Homology	CDS	25000	25494	.	-	0	ID=cds-WP_001241346.1;Parent=gene-C9F00_RS02910;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9F00_RS02910;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	25654	26385	.	-	.	ID=gene-C9F00_RS02915;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=C9F00_RS02915;old_locus_tag=C9F00_02970
NZ_PYKC01000012.1	Protein Homology	CDS	25654	26385	.	-	0	ID=cds-WP_000940032.1;Parent=gene-C9F00_RS02915;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9F00_RS02915;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	26504	27307	.	+	.	ID=gene-C9F00_RS02920;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9F00_RS02920;old_locus_tag=C9F00_02975
NZ_PYKC01000012.1	Protein Homology	CDS	26504	27307	.	+	0	ID=cds-WP_000553467.1;Parent=gene-C9F00_RS02920;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9F00_RS02920;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	27452	28330	.	+	.	ID=gene-C9F00_RS02925;Name=C9F00_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02925;old_locus_tag=C9F00_02980
NZ_PYKC01000012.1	Protein Homology	CDS	27452	28330	.	+	0	ID=cds-WP_000174944.1;Parent=gene-C9F00_RS02925;Dbxref=GenBank:WP_000174944.1;Name=WP_000174944.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9F00_RS02925;product=alpha/beta hydrolase;protein_id=WP_000174944.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	28512	29555	.	+	.	ID=gene-C9F00_RS02930;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=C9F00_RS02930;old_locus_tag=C9F00_02985
NZ_PYKC01000012.1	Protein Homology	CDS	28512	29555	.	+	0	ID=cds-WP_000985205.1;Parent=gene-C9F00_RS02930;Dbxref=GenBank:WP_000985205.1;Name=WP_000985205.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9F00_RS02930;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985205.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	29559	30377	.	+	.	ID=gene-C9F00_RS02935;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9F00_RS02935;old_locus_tag=C9F00_02990
NZ_PYKC01000012.1	Protein Homology	CDS	29559	30377	.	+	0	ID=cds-WP_000017587.1;Parent=gene-C9F00_RS02935;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9F00_RS02935;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	30388	31401	.	+	.	ID=gene-C9F00_RS02940;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9F00_RS02940;old_locus_tag=C9F00_02995
NZ_PYKC01000012.1	Protein Homology	CDS	30388	31401	.	+	0	ID=cds-WP_000020685.1;Parent=gene-C9F00_RS02940;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9F00_RS02940;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	31402	32388	.	-	.	ID=gene-C9F00_RS02945;Name=C9F00_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02945;old_locus_tag=C9F00_03000
NZ_PYKC01000012.1	Protein Homology	CDS	31402	32388	.	-	0	ID=cds-WP_135369074.1;Parent=gene-C9F00_RS02945;Dbxref=GenBank:WP_135369074.1;Name=WP_135369074.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9F00_RS02945;product=nickel/cobalt transporter;protein_id=WP_135369074.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	32379	33017	.	-	.	ID=gene-C9F00_RS02950;Name=C9F00_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02950;old_locus_tag=C9F00_03005
NZ_PYKC01000012.1	Protein Homology	CDS	32379	33017	.	-	0	ID=cds-WP_135369075.1;Parent=gene-C9F00_RS02950;Dbxref=GenBank:WP_135369075.1;Name=WP_135369075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9F00_RS02950;product=DUF1007 family protein;protein_id=WP_135369075.1;transl_table=11
NZ_PYKC01000012.1	RefSeq	gene	33143	34368	.	+	.	ID=gene-C9F00_RS02955;Name=csiE;end_range=34368,.;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9F00_RS02955;old_locus_tag=C9F00_03010;partial=true
NZ_PYKC01000012.1	Protein Homology	CDS	33143	34368	.	+	0	ID=cds-WP_245306375.1;Parent=gene-C9F00_RS02955;Dbxref=GenBank:WP_245306375.1;Name=WP_245306375.1;end_range=34368,.;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328648.1;locus_tag=C9F00_RS02955;partial=true;product=stationary phase inducible protein CsiE;protein_id=WP_245306375.1;transl_table=11
##sequence-region NZ_PYKC01000091.1 1 34255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000091.1	RefSeq	region	1	34255	.	+	.	ID=NZ_PYKC01000091.1:1..34255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000091.1	RefSeq	gene	141	551	.	-	.	ID=gene-C9F00_RS14730;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9F00_RS14730;old_locus_tag=C9F00_15085
NZ_PYKC01000091.1	Protein Homology	CDS	141	551	.	-	0	ID=cds-WP_000833182.1;Parent=gene-C9F00_RS14730;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9F00_RS14730;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	687	1367	.	+	.	ID=gene-C9F00_RS14735;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=C9F00_RS14735;old_locus_tag=C9F00_15090
NZ_PYKC01000091.1	Protein Homology	CDS	687	1367	.	+	0	ID=cds-WP_135369345.1;Parent=gene-C9F00_RS14735;Dbxref=GenBank:WP_135369345.1;Name=WP_135369345.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9F00_RS14735;product=response regulator transcription factor HprR;protein_id=WP_135369345.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	1360	2724	.	+	.	ID=gene-C9F00_RS14740;Name=C9F00_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14740;old_locus_tag=C9F00_15095
NZ_PYKC01000091.1	Protein Homology	CDS	1360	2724	.	+	0	ID=cds-WP_000240033.1;Parent=gene-C9F00_RS14740;Dbxref=GenBank:WP_000240033.1;Name=WP_000240033.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9F00_RS14740;product=heavy metal sensor histidine kinase;protein_id=WP_000240033.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	2897	4366	.	+	.	ID=gene-C9F00_RS14745;Name=C9F00_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14745;old_locus_tag=C9F00_15100
NZ_PYKC01000091.1	Protein Homology	CDS	2897	4366	.	+	0	ID=cds-WP_000760235.1;Parent=gene-C9F00_RS14745;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9F00_RS14745;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	4475	4585	.	+	.	ID=gene-C9F00_RS14750;Name=C9F00_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14750;old_locus_tag=C9F00_15105
NZ_PYKC01000091.1	Protein Homology	CDS	4475	4585	.	+	0	ID=cds-WP_000174813.1;Parent=gene-C9F00_RS14750;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9F00_RS14750;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	4586	4756	.	-	.	ID=gene-C9F00_RS14755;Name=C9F00_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14755;old_locus_tag=C9F00_15110
NZ_PYKC01000091.1	Protein Homology	CDS	4586	4756	.	-	0	ID=cds-WP_001111006.1;Parent=gene-C9F00_RS14755;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9F00_RS14755;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	5090	6775	.	+	.	ID=gene-C9F00_RS14760;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=C9F00_RS14760;old_locus_tag=C9F00_15115
NZ_PYKC01000091.1	Protein Homology	CDS	5090	6775	.	+	0	ID=cds-WP_135369344.1;Parent=gene-C9F00_RS14760;Dbxref=GenBank:WP_135369344.1;Name=WP_135369344.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9F00_RS14760;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_135369344.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	6792	7133	.	+	.	ID=gene-C9F00_RS14765;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9F00_RS14765;old_locus_tag=C9F00_15120
NZ_PYKC01000091.1	Protein Homology	CDS	6792	7133	.	+	0	ID=cds-WP_047607139.1;Parent=gene-C9F00_RS14765;Dbxref=GenBank:WP_047607139.1;Name=WP_047607139.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9F00_RS14765;product=type III secretion system chaperone SigE;protein_id=WP_047607139.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	7124	7462	.	-	.	ID=gene-C9F00_RS14770;Name=C9F00_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14770;old_locus_tag=C9F00_15125
NZ_PYKC01000091.1	Protein Homology	CDS	7124	7462	.	-	0	ID=cds-WP_135420319.1;Parent=gene-C9F00_RS14770;Dbxref=GenBank:WP_135420319.1;Name=WP_135420319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9F00_RS14770;product=hypothetical protein;protein_id=WP_135420319.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	7564	7722	.	+	.	ID=gene-C9F00_RS24845;Name=C9F00_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24845
NZ_PYKC01000091.1	Protein Homology	CDS	7564	7722	.	+	0	ID=cds-WP_432422819.1;Parent=gene-C9F00_RS24845;Dbxref=GenBank:WP_432422819.1;Name=WP_432422819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=C9F00_RS24845;product=hypothetical protein;protein_id=WP_432422819.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	8113	8988	.	+	.	ID=gene-C9F00_RS14780;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9F00_RS14780;old_locus_tag=C9F00_15130
NZ_PYKC01000091.1	Protein Homology	CDS	8113	8988	.	+	0	ID=cds-WP_001587007.1;Parent=gene-C9F00_RS14780;Dbxref=GenBank:WP_001587007.1;Name=WP_001587007.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9F00_RS14780;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001587007.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	9211	9891	.	+	.	ID=gene-C9F00_RS14785;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9F00_RS14785;old_locus_tag=C9F00_15135
NZ_PYKC01000091.1	Protein Homology	CDS	9211	9891	.	+	0	ID=cds-WP_000938180.1;Parent=gene-C9F00_RS14785;Dbxref=GenBank:WP_000938180.1;Name=WP_000938180.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9F00_RS14785;product=type III secretion system effector protease PipA;protein_id=WP_000938180.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	10028	10115	.	-	.	ID=gene-C9F00_RS14790;Name=C9F00_RS14790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS14790;old_locus_tag=C9F00_15140
NZ_PYKC01000091.1	tRNAscan-SE	tRNA	10028	10115	.	-	.	ID=rna-C9F00_RS14790;Parent=gene-C9F00_RS14790;anticodon=(pos:complement(10079..10081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS14790;product=tRNA-Ser
NZ_PYKC01000091.1	tRNAscan-SE	exon	10028	10115	.	-	.	ID=exon-C9F00_RS14790-1;Parent=rna-C9F00_RS14790;anticodon=(pos:complement(10079..10081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS14790;product=tRNA-Ser
NZ_PYKC01000091.1	RefSeq	gene	10510	11169	.	+	.	ID=gene-C9F00_RS14795;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9F00_RS14795;old_locus_tag=C9F00_15145
NZ_PYKC01000091.1	Protein Homology	CDS	10510	11169	.	+	0	ID=cds-WP_000374046.1;Parent=gene-C9F00_RS14795;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9F00_RS14795;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	11256	11585	.	+	.	ID=gene-C9F00_RS14800;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=C9F00_RS14800;old_locus_tag=C9F00_15150
NZ_PYKC01000091.1	Protein Homology	CDS	11256	11585	.	+	0	ID=cds-WP_000904446.1;Parent=gene-C9F00_RS14800;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9F00_RS14800;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	11582	11863	.	-	.	ID=gene-C9F00_RS14805;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9F00_RS14805;old_locus_tag=C9F00_15155
NZ_PYKC01000091.1	Protein Homology	CDS	11582	11863	.	-	0	ID=cds-WP_135369155.1;Parent=gene-C9F00_RS14805;Dbxref=GenBank:WP_135369155.1;Name=WP_135369155.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9F00_RS14805;product=acylphosphatase;protein_id=WP_135369155.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	11912	12691	.	-	.	ID=gene-C9F00_RS14810;Name=C9F00_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14810;old_locus_tag=C9F00_15160
NZ_PYKC01000091.1	Protein Homology	CDS	11912	12691	.	-	0	ID=cds-WP_135369156.1;Parent=gene-C9F00_RS14810;Dbxref=GenBank:WP_135369156.1;Name=WP_135369156.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9F00_RS14810;product=helix-turn-helix transcriptional regulator;protein_id=WP_135369156.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	12717	13265	.	-	.	ID=gene-C9F00_RS14815;Name=C9F00_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14815;old_locus_tag=C9F00_15165
NZ_PYKC01000091.1	Protein Homology	CDS	12717	13265	.	-	0	ID=cds-WP_000859416.1;Parent=gene-C9F00_RS14815;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9F00_RS14815;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	13480	14691	.	+	.	ID=gene-C9F00_RS14820;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9F00_RS14820;old_locus_tag=C9F00_15170
NZ_PYKC01000091.1	Protein Homology	CDS	13480	14691	.	+	0	ID=cds-WP_135369157.1;Parent=gene-C9F00_RS14820;Dbxref=GenBank:WP_135369157.1;Name=WP_135369157.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9F00_RS14820;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_135369157.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	14749	15066	.	+	.	ID=gene-C9F00_RS14825;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9F00_RS14825;old_locus_tag=C9F00_15175
NZ_PYKC01000091.1	Protein Homology	CDS	14749	15066	.	+	0	ID=cds-WP_000561983.1;Parent=gene-C9F00_RS14825;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9F00_RS14825;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	15111	15524	.	-	.	ID=gene-C9F00_RS14830;Name=C9F00_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14830;old_locus_tag=C9F00_15180
NZ_PYKC01000091.1	Protein Homology	CDS	15111	15524	.	-	0	ID=cds-WP_001537782.1;Parent=gene-C9F00_RS14830;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9F00_RS14830;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	15698	16360	.	+	.	ID=gene-C9F00_RS14835;Name=C9F00_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14835;old_locus_tag=C9F00_15185
NZ_PYKC01000091.1	Protein Homology	CDS	15698	16360	.	+	0	ID=cds-WP_000847719.1;Parent=gene-C9F00_RS14835;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9F00_RS14835;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	16455	16913	.	+	.	ID=gene-C9F00_RS14840;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9F00_RS14840;old_locus_tag=C9F00_15190
NZ_PYKC01000091.1	Protein Homology	CDS	16455	16913	.	+	0	ID=cds-WP_000424187.1;Parent=gene-C9F00_RS14840;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9F00_RS14840;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	16949	19003	.	-	.	ID=gene-C9F00_RS14845;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9F00_RS14845;old_locus_tag=C9F00_15195
NZ_PYKC01000091.1	Protein Homology	CDS	16949	19003	.	-	0	ID=cds-WP_135369158.1;Parent=gene-C9F00_RS14845;Dbxref=GenBank:WP_135369158.1;Name=WP_135369158.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9F00_RS14845;product=DNA helicase IV;protein_id=WP_135369158.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	19127	19573	.	+	.	ID=gene-C9F00_RS14850;Name=C9F00_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14850;old_locus_tag=C9F00_15200
NZ_PYKC01000091.1	Protein Homology	CDS	19127	19573	.	+	0	ID=cds-WP_001261222.1;Parent=gene-C9F00_RS14850;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9F00_RS14850;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	19592	21745	.	+	.	ID=gene-C9F00_RS14855;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9F00_RS14855;old_locus_tag=C9F00_15205
NZ_PYKC01000091.1	Protein Homology	CDS	19592	21745	.	+	0	ID=cds-WP_000950876.1;Parent=gene-C9F00_RS14855;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9F00_RS14855;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	21732	22337	.	-	.	ID=gene-C9F00_RS14860;Name=C9F00_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14860;old_locus_tag=C9F00_15210
NZ_PYKC01000091.1	Protein Homology	CDS	21732	22337	.	-	0	ID=cds-WP_001202375.1;Parent=gene-C9F00_RS14860;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9F00_RS14860;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	22554	23063	.	+	.	ID=gene-C9F00_RS14865;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=C9F00_RS14865;old_locus_tag=C9F00_15215
NZ_PYKC01000091.1	Protein Homology	CDS	22554	23063	.	+	0	ID=cds-WP_000288732.1;Parent=gene-C9F00_RS14865;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9F00_RS14865;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	23420	24472	.	+	.	ID=gene-C9F00_RS14870;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9F00_RS14870;old_locus_tag=C9F00_15220
NZ_PYKC01000091.1	Protein Homology	CDS	23420	24472	.	+	0	ID=cds-WP_001670727.1;Parent=gene-C9F00_RS14870;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9F00_RS14870;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	24544	24996	.	-	.	ID=gene-C9F00_RS14875;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=C9F00_RS14875;old_locus_tag=C9F00_15225
NZ_PYKC01000091.1	Protein Homology	CDS	24544	24996	.	-	0	ID=cds-WP_000877172.1;Parent=gene-C9F00_RS14875;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9F00_RS14875;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	25182	26942	.	+	.	ID=gene-C9F00_RS14880;Name=C9F00_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14880;old_locus_tag=C9F00_15230
NZ_PYKC01000091.1	Protein Homology	CDS	25182	26942	.	+	0	ID=cds-WP_000156448.1;Parent=gene-C9F00_RS14880;Dbxref=GenBank:WP_000156448.1;Name=WP_000156448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9F00_RS14880;product=AAA family ATPase;protein_id=WP_000156448.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	27011	27529	.	+	.	ID=gene-C9F00_RS14885;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9F00_RS14885;old_locus_tag=C9F00_15235
NZ_PYKC01000091.1	Protein Homology	CDS	27011	27529	.	+	0	ID=cds-WP_000227928.1;Parent=gene-C9F00_RS14885;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9F00_RS14885;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	27629	27796	.	-	.	ID=gene-C9F00_RS14890;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9F00_RS14890;old_locus_tag=C9F00_15240
NZ_PYKC01000091.1	Protein Homology	CDS	27629	27796	.	-	0	ID=cds-WP_001537784.1;Parent=gene-C9F00_RS14890;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9F00_RS14890;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	28052	28615	.	-	.	ID=gene-C9F00_RS14895;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9F00_RS14895;old_locus_tag=C9F00_15245
NZ_PYKC01000091.1	Protein Homology	CDS	28052	28615	.	-	0	ID=cds-WP_000759136.1;Parent=gene-C9F00_RS14895;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9F00_RS14895;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	28612	30252	.	-	.	ID=gene-C9F00_RS14900;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9F00_RS14900;old_locus_tag=C9F00_15250
NZ_PYKC01000091.1	Protein Homology	CDS	28612	30252	.	-	0	ID=cds-WP_000433414.1;Parent=gene-C9F00_RS14900;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9F00_RS14900;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	pseudogene	30257	31510	.	-	.	ID=gene-C9F00_RS14905;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=pseudogene;locus_tag=C9F00_RS14905;old_locus_tag=C9F00_15255;pseudo=true
NZ_PYKC01000091.1	Protein Homology	CDS	30257	31510	.	-	0	ID=cds-C9F00_RS14905;Parent=gene-C9F00_RS14905;Note=internal stop;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9F00_RS14905;product=membrane integrity-associated transporter subunit PqiA;pseudo=true;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	31525	33432	.	-	.	ID=gene-C9F00_RS14910;Name=C9F00_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14910;old_locus_tag=C9F00_15260
NZ_PYKC01000091.1	Protein Homology	CDS	31525	33432	.	-	0	ID=cds-WP_000053044.1;Parent=gene-C9F00_RS14910;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F00_RS14910;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11
NZ_PYKC01000091.1	RefSeq	gene	33445	34255	.	-	.	ID=gene-C9F00_RS14915;Name=C9F00_RS14915;end_range=34255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14915;old_locus_tag=C9F00_15265;partial=true
NZ_PYKC01000091.1	Protein Homology	CDS	33445	34255	.	-	1	ID=cds-WP_135492366.1;Parent=gene-C9F00_RS14915;Dbxref=GenBank:WP_135492366.1;Name=WP_135492366.1;Ontology_term=GO:0008168;end_range=34255,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F00_RS14915;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_135492366.1;transl_table=11
##sequence-region NZ_PYKC01000094.1 1 34248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000094.1	RefSeq	region	1	34248	.	+	.	ID=NZ_PYKC01000094.1:1..34248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000094.1	RefSeq	gene	1	502	.	+	.	ID=gene-C9F00_RS15225;Name=C9F00_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15225;old_locus_tag=C9F00_15580;partial=true;start_range=.,1
NZ_PYKC01000094.1	Protein Homology	CDS	1	502	.	+	1	ID=cds-WP_280954489.1;Parent=gene-C9F00_RS15225;Dbxref=GenBank:WP_280954489.1;Name=WP_280954489.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115849.1;locus_tag=C9F00_RS15225;partial=true;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_280954489.1;start_range=.,1;transl_table=11
NZ_PYKC01000094.1	RefSeq	pseudogene	602	829	.	+	.	ID=gene-C9F00_RS15230;Name=C9F00_RS15230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15230;old_locus_tag=C9F00_15590;partial=true;pseudo=true;start_range=.,602
NZ_PYKC01000094.1	Protein Homology	CDS	602	829	.	+	0	ID=cds-C9F00_RS15230;Parent=gene-C9F00_RS15230;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807729.1;locus_tag=C9F00_RS15230;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,602;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	822	1493	.	-	.	ID=gene-C9F00_RS15235;Name=C9F00_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15235;old_locus_tag=C9F00_15595
NZ_PYKC01000094.1	Protein Homology	CDS	822	1493	.	-	0	ID=cds-WP_045899726.1;Parent=gene-C9F00_RS15235;Dbxref=GenBank:WP_045899726.1;Name=WP_045899726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=C9F00_RS15235;product=SOS response-associated peptidase;protein_id=WP_045899726.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	pseudogene	1716	1817	.	-	.	ID=gene-C9F00_RS24470;Name=C9F00_RS24470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24470;partial=true;pseudo=true;start_range=.,1716
NZ_PYKC01000094.1	Protein Homology	CDS	1716	1817	.	-	0	ID=cds-C9F00_RS24470;Parent=gene-C9F00_RS24470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9F00_RS24470;partial=true;product=DUF72 domain-containing protein;pseudo=true;start_range=.,1716;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	1814	2380	.	-	.	ID=gene-C9F00_RS15245;Name=C9F00_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15245;old_locus_tag=C9F00_15605
NZ_PYKC01000094.1	Protein Homology	CDS	1814	2380	.	-	0	ID=cds-WP_024797679.1;Parent=gene-C9F00_RS15245;Dbxref=GenBank:WP_024797679.1;Name=WP_024797679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9F00_RS15245;product=hydrolase;protein_id=WP_024797679.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	2705	4477	.	+	.	ID=gene-C9F00_RS15250;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9F00_RS15250;old_locus_tag=C9F00_15610
NZ_PYKC01000094.1	Protein Homology	CDS	2705	4477	.	+	0	ID=cds-WP_001258633.1;Parent=gene-C9F00_RS15250;Dbxref=GenBank:WP_001258633.1;Name=WP_001258633.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9F00_RS15250;product=aspartate--tRNA ligase;protein_id=WP_001258633.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	4580	5032	.	+	.	ID=gene-C9F00_RS15255;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9F00_RS15255;old_locus_tag=C9F00_15615
NZ_PYKC01000094.1	Protein Homology	CDS	4580	5032	.	+	0	ID=cds-WP_000653693.1;Parent=gene-C9F00_RS15255;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9F00_RS15255;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	5062	5802	.	+	.	ID=gene-C9F00_RS15260;Name=C9F00_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15260;old_locus_tag=C9F00_15620
NZ_PYKC01000094.1	Protein Homology	CDS	5062	5802	.	+	0	ID=cds-WP_000907242.1;Parent=gene-C9F00_RS15260;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9F00_RS15260;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	5839	6360	.	+	.	ID=gene-C9F00_RS15265;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9F00_RS15265;old_locus_tag=C9F00_15625
NZ_PYKC01000094.1	Protein Homology	CDS	5839	6360	.	+	0	ID=cds-WP_000022510.1;Parent=gene-C9F00_RS15265;Dbxref=GenBank:WP_000022510.1;Name=WP_000022510.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9F00_RS15265;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022510.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	6391	7887	.	+	.	ID=gene-C9F00_RS15270;Name=C9F00_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15270;old_locus_tag=C9F00_15630
NZ_PYKC01000094.1	Protein Homology	CDS	6391	7887	.	+	0	ID=cds-WP_135369393.1;Parent=gene-C9F00_RS15270;Dbxref=GenBank:WP_135369393.1;Name=WP_135369393.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9F00_RS15270;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_135369393.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	7987	8583	.	-	.	ID=gene-C9F00_RS15275;Name=C9F00_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15275;old_locus_tag=C9F00_15635
NZ_PYKC01000094.1	Protein Homology	CDS	7987	8583	.	-	0	ID=cds-WP_000716751.1;Parent=gene-C9F00_RS15275;Dbxref=GenBank:WP_000716751.1;Name=WP_000716751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=C9F00_RS15275;product=YebB family permuted papain-like enzyme;protein_id=WP_000716751.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	8793	9485	.	+	.	ID=gene-C9F00_RS15280;Name=C9F00_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15280;old_locus_tag=C9F00_15640
NZ_PYKC01000094.1	Protein Homology	CDS	8793	9485	.	+	0	ID=cds-WP_000227324.1;Parent=gene-C9F00_RS15280;Dbxref=GenBank:WP_000227324.1;Name=WP_000227324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=C9F00_RS15280;product=hypothetical protein;protein_id=WP_000227324.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	9845	10456	.	+	.	ID=gene-C9F00_RS15285;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9F00_RS15285;old_locus_tag=C9F00_15645
NZ_PYKC01000094.1	Protein Homology	CDS	9845	10456	.	+	0	ID=cds-WP_000580335.1;Parent=gene-C9F00_RS15285;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9F00_RS15285;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	10465	11475	.	+	.	ID=gene-C9F00_RS15290;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=C9F00_RS15290;old_locus_tag=C9F00_15650
NZ_PYKC01000094.1	Protein Homology	CDS	10465	11475	.	+	0	ID=cds-WP_000568504.1;Parent=gene-C9F00_RS15290;Dbxref=GenBank:WP_000568504.1;Name=WP_000568504.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9F00_RS15290;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568504.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	11554	12339	.	-	.	ID=gene-C9F00_RS15295;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9F00_RS15295;old_locus_tag=C9F00_15655
NZ_PYKC01000094.1	Protein Homology	CDS	11554	12339	.	-	0	ID=cds-WP_000571508.1;Parent=gene-C9F00_RS15295;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9F00_RS15295;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	12336	13091	.	-	.	ID=gene-C9F00_RS15300;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9F00_RS15300;old_locus_tag=C9F00_15660
NZ_PYKC01000094.1	Protein Homology	CDS	12336	13091	.	-	0	ID=cds-WP_000203013.1;Parent=gene-C9F00_RS15300;Dbxref=GenBank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9F00_RS15300;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	13170	14114	.	+	.	ID=gene-C9F00_RS15305;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9F00_RS15305;old_locus_tag=C9F00_15665
NZ_PYKC01000094.1	Protein Homology	CDS	13170	14114	.	+	0	ID=cds-WP_000939597.1;Parent=gene-C9F00_RS15305;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9F00_RS15305;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	14130	15449	.	+	.	ID=gene-C9F00_RS15310;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9F00_RS15310;old_locus_tag=C9F00_15670
NZ_PYKC01000094.1	Protein Homology	CDS	14130	15449	.	+	0	ID=cds-WP_001184028.1;Parent=gene-C9F00_RS15310;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F00_RS15310;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	15566	16537	.	+	.	ID=gene-C9F00_RS15315;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9F00_RS15315;old_locus_tag=C9F00_15680
NZ_PYKC01000094.1	Protein Homology	CDS	15566	16537	.	+	0	ID=cds-WP_000448401.1;Parent=gene-C9F00_RS15315;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9F00_RS15315;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	16610	18052	.	-	.	ID=gene-C9F00_RS15320;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9F00_RS15320;old_locus_tag=C9F00_15685
NZ_PYKC01000094.1	Protein Homology	CDS	16610	18052	.	-	0	ID=cds-WP_000091156.1;Parent=gene-C9F00_RS15320;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9F00_RS15320;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	18176	19045	.	-	.	ID=gene-C9F00_RS15325;Name=C9F00_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15325;old_locus_tag=C9F00_15690
NZ_PYKC01000094.1	Protein Homology	CDS	18176	19045	.	-	0	ID=cds-WP_020898861.1;Parent=gene-C9F00_RS15325;Dbxref=GenBank:WP_020898861.1;Name=WP_020898861.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9F00_RS15325;product=MurR/RpiR family transcriptional regulator;protein_id=WP_020898861.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	19387	20862	.	+	.	ID=gene-C9F00_RS15335;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9F00_RS15335;old_locus_tag=C9F00_15700
NZ_PYKC01000094.1	Protein Homology	CDS	19387	20862	.	+	0	ID=cds-WP_000301711.1;Parent=gene-C9F00_RS15335;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F00_RS15335;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	21097	22908	.	+	.	ID=gene-C9F00_RS15340;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=C9F00_RS15340;old_locus_tag=C9F00_15705
NZ_PYKC01000094.1	Protein Homology	CDS	21097	22908	.	+	0	ID=cds-WP_001069124.1;Parent=gene-C9F00_RS15340;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9F00_RS15340;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	22946	23587	.	+	.	ID=gene-C9F00_RS15345;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=C9F00_RS15345;old_locus_tag=C9F00_15710
NZ_PYKC01000094.1	Protein Homology	CDS	22946	23587	.	+	0	ID=cds-WP_023243915.1;Parent=gene-C9F00_RS15345;Dbxref=GenBank:WP_023243915.1;Name=WP_023243915.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9F00_RS15345;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_023243915.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	23687	24865	.	-	.	ID=gene-C9F00_RS15350;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9F00_RS15350;old_locus_tag=C9F00_15715
NZ_PYKC01000094.1	Protein Homology	CDS	23687	24865	.	-	0	ID=cds-WP_001524392.1;Parent=gene-C9F00_RS15350;Dbxref=GenBank:WP_001524392.1;Name=WP_001524392.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9F00_RS15350;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001524392.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	24996	25286	.	+	.	ID=gene-C9F00_RS15355;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9F00_RS15355;old_locus_tag=C9F00_15720
NZ_PYKC01000094.1	Protein Homology	CDS	24996	25286	.	+	0	ID=cds-WP_000257726.1;Parent=gene-C9F00_RS15355;Dbxref=GenBank:WP_000257726.1;Name=WP_000257726.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9F00_RS15355;product=DNA damage-inducible protein YebG;protein_id=WP_000257726.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	25354	25707	.	+	.	ID=gene-C9F00_RS15360;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=C9F00_RS15360;old_locus_tag=C9F00_15725
NZ_PYKC01000094.1	Protein Homology	CDS	25354	25707	.	+	0	ID=cds-WP_001042123.1;Parent=gene-C9F00_RS15360;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9F00_RS15360;product=protein YebF;protein_id=WP_001042123.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	25801	26460	.	+	.	ID=gene-C9F00_RS15365;Name=C9F00_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15365;old_locus_tag=C9F00_15730
NZ_PYKC01000094.1	Protein Homology	CDS	25801	26460	.	+	0	ID=cds-WP_000024707.1;Parent=gene-C9F00_RS15365;Dbxref=GenBank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9F00_RS15365;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	26673	28724	.	+	.	ID=gene-C9F00_RS15370;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9F00_RS15370;old_locus_tag=C9F00_15735
NZ_PYKC01000094.1	Protein Homology	CDS	26673	28724	.	+	0	ID=cds-WP_135492374.1;Parent=gene-C9F00_RS15370;Dbxref=GenBank:WP_135492374.1;Name=WP_135492374.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9F00_RS15370;product=oligopeptidase B;protein_id=WP_135492374.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	28761	29459	.	-	.	ID=gene-C9F00_RS15375;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9F00_RS15375;old_locus_tag=C9F00_15740
NZ_PYKC01000094.1	Protein Homology	CDS	28761	29459	.	-	0	ID=cds-WP_135369098.1;Parent=gene-C9F00_RS15375;Dbxref=GenBank:WP_135369098.1;Name=WP_135369098.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9F00_RS15375;product=exodeoxyribonuclease X;protein_id=WP_135369098.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	29483	30139	.	-	.	ID=gene-C9F00_RS15380;Name=C9F00_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15380;old_locus_tag=C9F00_15745
NZ_PYKC01000094.1	Protein Homology	CDS	29483	30139	.	-	0	ID=cds-WP_000100257.1;Parent=gene-C9F00_RS15380;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9F00_RS15380;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	30247	30477	.	-	.	ID=gene-C9F00_RS15385;Name=C9F00_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15385;old_locus_tag=C9F00_15750
NZ_PYKC01000094.1	Protein Homology	CDS	30247	30477	.	-	0	ID=cds-WP_000856224.1;Parent=gene-C9F00_RS15385;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9F00_RS15385;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	30615	30989	.	+	.	ID=gene-C9F00_RS15390;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9F00_RS15390;old_locus_tag=C9F00_15755
NZ_PYKC01000094.1	Protein Homology	CDS	30615	30989	.	+	0	ID=cds-WP_000168393.1;Parent=gene-C9F00_RS15390;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9F00_RS15390;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	30990	31865	.	+	.	ID=gene-C9F00_RS15395;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9F00_RS15395;old_locus_tag=C9F00_15760
NZ_PYKC01000094.1	Protein Homology	CDS	30990	31865	.	+	0	ID=cds-WP_000979689.1;Parent=gene-C9F00_RS15395;Dbxref=GenBank:WP_000979689.1;Name=WP_000979689.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9F00_RS15395;product=copper homeostasis membrane protein CopD;protein_id=WP_000979689.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	gene	31882	32235	.	+	.	ID=gene-C9F00_RS15400;Name=C9F00_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15400;old_locus_tag=C9F00_15765
NZ_PYKC01000094.1	Protein Homology	CDS	31882	32235	.	+	0	ID=cds-WP_000722368.1;Parent=gene-C9F00_RS15400;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9F00_RS15400;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11
NZ_PYKC01000094.1	RefSeq	pseudogene	32618	32971	.	-	.	ID=gene-C9F00_RS15410;Name=C9F00_RS15410;end_range=32971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15410;old_locus_tag=C9F00_15780;partial=true;pseudo=true
NZ_PYKC01000094.1	Protein Homology	CDS	32618	32971	.	-	0	ID=cds-C9F00_RS15410;Parent=gene-C9F00_RS15410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=32971,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9F00_RS15410;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKC01000094.1	RefSeq	pseudogene	33233	34248	.	+	.	ID=gene-C9F00_RS15420;Name=C9F00_RS15420;end_range=34248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15420;old_locus_tag=C9F00_15790;partial=true;pseudo=true
NZ_PYKC01000094.1	Protein Homology	CDS	33233	34248	.	+	0	ID=cds-C9F00_RS15420;Parent=gene-C9F00_RS15420;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=34248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052938253.1;locus_tag=C9F00_RS15420;partial=true;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000142.1 1 33016
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000142.1	RefSeq	region	1	33016	.	+	.	ID=NZ_PYKC01000142.1:1..33016;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000142.1	RefSeq	gene	1	710	.	-	.	ID=gene-C9F00_RS21805;Name=C9F00_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21805;old_locus_tag=C9F00_22325;partial=true;start_range=.,1
NZ_PYKC01000142.1	Protein Homology	CDS	1	710	.	-	0	ID=cds-WP_135492514.1;Parent=gene-C9F00_RS21805;Dbxref=GenBank:WP_135492514.1;Name=WP_135492514.1;Ontology_term=GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9F00_RS21805;partial=true;product=D-cysteine desulfhydrase family protein;protein_id=WP_135492514.1;start_range=.,1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	864	1664	.	-	.	ID=gene-C9F00_RS21810;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9F00_RS21810;old_locus_tag=C9F00_22330
NZ_PYKC01000142.1	Protein Homology	CDS	864	1664	.	-	0	ID=cds-WP_000761628.1;Parent=gene-C9F00_RS21810;Dbxref=GenBank:WP_000761628.1;Name=WP_000761628.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9F00_RS21810;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761628.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	1811	2362	.	-	.	ID=gene-C9F00_RS21815;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9F00_RS21815;old_locus_tag=C9F00_22335
NZ_PYKC01000142.1	Protein Homology	CDS	1811	2362	.	-	0	ID=cds-WP_000218080.1;Parent=gene-C9F00_RS21815;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9F00_RS21815;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	2421	3140	.	-	.	ID=gene-C9F00_RS21820;Name=C9F00_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21820;old_locus_tag=C9F00_22340
NZ_PYKC01000142.1	Protein Homology	CDS	2421	3140	.	-	0	ID=cds-WP_135492516.1;Parent=gene-C9F00_RS21820;Dbxref=GenBank:WP_135492516.1;Name=WP_135492516.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9F00_RS21820;product=RNA polymerase sigma factor FliA;protein_id=WP_135492516.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	3337	4542	.	-	.	ID=gene-C9F00_RS21825;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9F00_RS21825;old_locus_tag=C9F00_22345
NZ_PYKC01000142.1	Protein Homology	CDS	3337	4542	.	-	0	ID=cds-WP_135369690.1;Parent=gene-C9F00_RS21825;Dbxref=GenBank:WP_135369690.1;Name=WP_135369690.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9F00_RS21825;product=flagellin lysine-N-methylase;protein_id=WP_135369690.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	4621	5886	.	-	.	ID=gene-C9F00_RS21830;Name=C9F00_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21830;old_locus_tag=C9F00_22350
NZ_PYKC01000142.1	Protein Homology	CDS	4621	5886	.	-	0	ID=cds-WP_135369691.1;Parent=gene-C9F00_RS21830;Dbxref=GenBank:WP_135369691.1;Name=WP_135369691.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953542.1;locus_tag=C9F00_RS21830;product=FliC/FljB family flagellin;protein_id=WP_135369691.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	5904	6125	.	-	.	ID=gene-C9F00_RS24135;Name=C9F00_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24135
NZ_PYKC01000142.1	GeneMarkS-2+	CDS	5904	6125	.	-	0	ID=cds-WP_023234688.1;Parent=gene-C9F00_RS24135;Dbxref=GenBank:WP_023234688.1;Name=WP_023234688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24135;product=hypothetical protein;protein_id=WP_023234688.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	6142	7545	.	+	.	ID=gene-C9F00_RS21835;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9F00_RS21835;old_locus_tag=C9F00_22355
NZ_PYKC01000142.1	Protein Homology	CDS	6142	7545	.	+	0	ID=cds-WP_031605229.1;Parent=gene-C9F00_RS21835;Dbxref=GenBank:WP_031605229.1;Name=WP_031605229.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9F00_RS21835;product=flagellar filament capping protein FliD;protein_id=WP_031605229.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	7560	7967	.	+	.	ID=gene-C9F00_RS21840;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9F00_RS21840;old_locus_tag=C9F00_22360
NZ_PYKC01000142.1	Protein Homology	CDS	7560	7967	.	+	0	ID=cds-WP_000287764.1;Parent=gene-C9F00_RS21840;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9F00_RS21840;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	7967	8335	.	+	.	ID=gene-C9F00_RS21845;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9F00_RS21845;old_locus_tag=C9F00_22365
NZ_PYKC01000142.1	Protein Homology	CDS	7967	8335	.	+	0	ID=cds-WP_000204899.1;Parent=gene-C9F00_RS21845;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9F00_RS21845;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	8407	9891	.	+	.	ID=gene-C9F00_RS21850;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9F00_RS21850;old_locus_tag=C9F00_22370
NZ_PYKC01000142.1	Protein Homology	CDS	8407	9891	.	+	0	ID=cds-WP_135369692.1;Parent=gene-C9F00_RS21850;Dbxref=GenBank:WP_135369692.1;Name=WP_135369692.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9F00_RS21850;product=alpha-amylase;protein_id=WP_135369692.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	9931	10344	.	-	.	ID=gene-C9F00_RS21855;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=C9F00_RS21855;old_locus_tag=C9F00_22375
NZ_PYKC01000142.1	Protein Homology	CDS	9931	10344	.	-	0	ID=cds-WP_000754694.1;Parent=gene-C9F00_RS21855;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=C9F00_RS21855;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	10530	11735	.	+	.	ID=gene-C9F00_RS21860;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9F00_RS21860;old_locus_tag=C9F00_22380
NZ_PYKC01000142.1	Protein Homology	CDS	10530	11735	.	+	0	ID=cds-WP_001519382.1;Parent=gene-C9F00_RS21860;Dbxref=GenBank:WP_001519382.1;Name=WP_001519382.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9F00_RS21860;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001519382.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	11732	11965	.	+	.	ID=gene-C9F00_RS21865;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9F00_RS21865;old_locus_tag=C9F00_22385
NZ_PYKC01000142.1	Protein Homology	CDS	11732	11965	.	+	0	ID=cds-WP_000790504.1;Parent=gene-C9F00_RS21865;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9F00_RS21865;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	12230	12616	.	+	.	ID=gene-C9F00_RS21870;Name=C9F00_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21870;old_locus_tag=C9F00_22390
NZ_PYKC01000142.1	Protein Homology	CDS	12230	12616	.	+	0	ID=cds-WP_001629111.1;Parent=gene-C9F00_RS21870;Dbxref=GenBank:WP_001629111.1;Name=WP_001629111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9F00_RS21870;product=hypothetical protein;protein_id=WP_001629111.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	12737	13051	.	-	.	ID=gene-C9F00_RS21875;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9F00_RS21875;old_locus_tag=C9F00_22395
NZ_PYKC01000142.1	Protein Homology	CDS	12737	13051	.	-	0	ID=cds-WP_000719037.1;Parent=gene-C9F00_RS21875;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9F00_RS21875;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	13268	14956	.	+	.	ID=gene-C9F00_RS21880;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9F00_RS21880;old_locus_tag=C9F00_22400
NZ_PYKC01000142.1	Protein Homology	CDS	13268	14956	.	+	0	ID=cds-WP_079960389.1;Parent=gene-C9F00_RS21880;Dbxref=GenBank:WP_079960389.1;Name=WP_079960389.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9F00_RS21880;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_079960389.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	14949	15944	.	+	.	ID=gene-C9F00_RS21885;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9F00_RS21885;old_locus_tag=C9F00_22405
NZ_PYKC01000142.1	Protein Homology	CDS	14949	15944	.	+	0	ID=cds-WP_000067735.1;Parent=gene-C9F00_RS21885;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9F00_RS21885;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	15937	16644	.	+	.	ID=gene-C9F00_RS21890;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9F00_RS21890;old_locus_tag=C9F00_22410
NZ_PYKC01000142.1	Protein Homology	CDS	15937	16644	.	+	0	ID=cds-WP_000064158.1;Parent=gene-C9F00_RS21890;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9F00_RS21890;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	16644	18014	.	+	.	ID=gene-C9F00_RS21895;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F00_RS21895;old_locus_tag=C9F00_22415
NZ_PYKC01000142.1	Protein Homology	CDS	16644	18014	.	+	0	ID=cds-WP_000213257.1;Parent=gene-C9F00_RS21895;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F00_RS21895;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	18036	18479	.	+	.	ID=gene-C9F00_RS21900;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9F00_RS21900;old_locus_tag=C9F00_22420
NZ_PYKC01000142.1	Protein Homology	CDS	18036	18479	.	+	0	ID=cds-WP_000046981.1;Parent=gene-C9F00_RS21900;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9F00_RS21900;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	18476	19699	.	+	.	ID=gene-C9F00_RS21905;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=C9F00_RS21905;old_locus_tag=C9F00_22425
NZ_PYKC01000142.1	Protein Homology	CDS	18476	19699	.	+	0	ID=cds-WP_000631673.1;Parent=gene-C9F00_RS21905;Dbxref=GenBank:WP_000631673.1;Name=WP_000631673.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9F00_RS21905;product=flagellar hook length control protein FliK;protein_id=WP_000631673.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	19804	20271	.	+	.	ID=gene-C9F00_RS21910;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9F00_RS21910;old_locus_tag=C9F00_22430
NZ_PYKC01000142.1	Protein Homology	CDS	19804	20271	.	+	0	ID=cds-WP_000132169.1;Parent=gene-C9F00_RS21910;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9F00_RS21910;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	20276	21280	.	+	.	ID=gene-C9F00_RS21915;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9F00_RS21915;old_locus_tag=C9F00_22435
NZ_PYKC01000142.1	Protein Homology	CDS	20276	21280	.	+	0	ID=cds-WP_000502811.1;Parent=gene-C9F00_RS21915;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9F00_RS21915;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	21277	21690	.	+	.	ID=gene-C9F00_RS21920;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9F00_RS21920;old_locus_tag=C9F00_22440
NZ_PYKC01000142.1	Protein Homology	CDS	21277	21690	.	+	0	ID=cds-WP_001282115.1;Parent=gene-C9F00_RS21920;Dbxref=GenBank:WP_001282115.1;Name=WP_001282115.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9F00_RS21920;product=flagellar motor switch protein FliN;protein_id=WP_001282115.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	21690	22067	.	+	.	ID=gene-C9F00_RS21925;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9F00_RS21925;old_locus_tag=C9F00_22445
NZ_PYKC01000142.1	Protein Homology	CDS	21690	22067	.	+	0	ID=cds-WP_000978276.1;Parent=gene-C9F00_RS21925;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9F00_RS21925;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	22067	22804	.	+	.	ID=gene-C9F00_RS21930;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9F00_RS21930;old_locus_tag=C9F00_22450
NZ_PYKC01000142.1	Protein Homology	CDS	22067	22804	.	+	0	ID=cds-WP_001253414.1;Parent=gene-C9F00_RS21930;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9F00_RS21930;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	22814	23083	.	+	.	ID=gene-C9F00_RS21935;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9F00_RS21935;old_locus_tag=C9F00_22455
NZ_PYKC01000142.1	Protein Homology	CDS	22814	23083	.	+	0	ID=cds-WP_000187355.1;Parent=gene-C9F00_RS21935;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9F00_RS21935;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	23092	23886	.	+	.	ID=gene-C9F00_RS21940;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9F00_RS21940;old_locus_tag=C9F00_22460
NZ_PYKC01000142.1	Protein Homology	CDS	23092	23886	.	+	0	ID=cds-WP_000616953.1;Parent=gene-C9F00_RS21940;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9F00_RS21940;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	24168	24791	.	+	.	ID=gene-C9F00_RS21945;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9F00_RS21945;old_locus_tag=C9F00_22465
NZ_PYKC01000142.1	Protein Homology	CDS	24168	24791	.	+	0	ID=cds-WP_000103971.1;Parent=gene-C9F00_RS21945;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9F00_RS21945;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	24830	25024	.	-	.	ID=gene-C9F00_RS21950;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9F00_RS21950;old_locus_tag=C9F00_22470
NZ_PYKC01000142.1	Protein Homology	CDS	24830	25024	.	-	0	ID=cds-WP_000867218.1;Parent=gene-C9F00_RS21950;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9F00_RS21950;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	25153	25380	.	+	.	ID=gene-C9F00_RS21955;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9F00_RS21955;old_locus_tag=C9F00_22475
NZ_PYKC01000142.1	Protein Homology	CDS	25153	25380	.	+	0	ID=cds-WP_000844798.1;Parent=gene-C9F00_RS21955;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9F00_RS21955;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	25690	26505	.	+	.	ID=gene-C9F00_RS21960;Name=C9F00_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21960;old_locus_tag=C9F00_22480
NZ_PYKC01000142.1	Protein Homology	CDS	25690	26505	.	+	0	ID=cds-WP_000948786.1;Parent=gene-C9F00_RS21960;Dbxref=GenBank:WP_000948786.1;Name=WP_000948786.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9F00_RS21960;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948786.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	26484	28196	.	-	.	ID=gene-C9F00_RS21965;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9F00_RS21965;old_locus_tag=C9F00_22485
NZ_PYKC01000142.1	Protein Homology	CDS	26484	28196	.	-	0	ID=cds-WP_135369693.1;Parent=gene-C9F00_RS21965;Dbxref=GenBank:WP_135369693.1;Name=WP_135369693.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9F00_RS21965;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_135369693.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	28361	28546	.	-	.	ID=gene-C9F00_RS21970;Name=C9F00_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21970;old_locus_tag=C9F00_22490
NZ_PYKC01000142.1	Protein Homology	CDS	28361	28546	.	-	0	ID=cds-WP_001521741.1;Parent=gene-C9F00_RS21970;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9F00_RS21970;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	28623	29540	.	-	.	ID=gene-C9F00_RS21975;Name=C9F00_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21975;old_locus_tag=C9F00_22495
NZ_PYKC01000142.1	Protein Homology	CDS	28623	29540	.	-	0	ID=cds-WP_085920526.1;Parent=gene-C9F00_RS21975;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9F00_RS21975;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	29710	30630	.	+	.	ID=gene-C9F00_RS21980;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9F00_RS21980;old_locus_tag=C9F00_22500
NZ_PYKC01000142.1	Protein Homology	CDS	29710	30630	.	+	0	ID=cds-WP_001212263.1;Parent=gene-C9F00_RS21980;Dbxref=GenBank:WP_001212263.1;Name=WP_001212263.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9F00_RS21980;product=drug/metabolite exporter YedA;protein_id=WP_001212263.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	30619	31089	.	-	.	ID=gene-C9F00_RS21985;Name=C9F00_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21985;old_locus_tag=C9F00_22505
NZ_PYKC01000142.1	Protein Homology	CDS	30619	31089	.	-	0	ID=cds-WP_000785978.1;Parent=gene-C9F00_RS21985;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9F00_RS21985;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	gene	31070	32500	.	-	.	ID=gene-C9F00_RS21990;Name=C9F00_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21990;old_locus_tag=C9F00_22510
NZ_PYKC01000142.1	Protein Homology	CDS	31070	32500	.	-	0	ID=cds-WP_001157315.1;Parent=gene-C9F00_RS21990;Dbxref=GenBank:WP_001157315.1;Name=WP_001157315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9F00_RS21990;product=DNA cytosine methyltransferase;protein_id=WP_001157315.1;transl_table=11
NZ_PYKC01000142.1	RefSeq	pseudogene	32574	33016	.	-	.	ID=gene-C9F00_RS21995;Name=C9F00_RS21995;end_range=33016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS21995;old_locus_tag=C9F00_22515;partial=true;pseudo=true
NZ_PYKC01000142.1	Protein Homology	CDS	32574	33016	.	-	2	ID=cds-C9F00_RS21995;Parent=gene-C9F00_RS21995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=33016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9F00_RS21995;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000129.1 1 32667
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000129.1	RefSeq	region	1	32667	.	+	.	ID=NZ_PYKC01000129.1:1..32667;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000129.1	RefSeq	pseudogene	26	331	.	-	.	ID=gene-C9F00_RS19410;Name=C9F00_RS19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19410;old_locus_tag=C9F00_19870;partial=true;pseudo=true;start_range=.,26
NZ_PYKC01000129.1	Protein Homology	CDS	26	331	.	-	0	ID=cds-C9F00_RS19410;Parent=gene-C9F00_RS19410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F00_RS19410;partial=true;product=D-serine/D-alanine/glycine transporter;pseudo=true;start_range=.,26;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	627	1247	.	-	.	ID=gene-C9F00_RS19415;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9F00_RS19415;old_locus_tag=C9F00_19875
NZ_PYKC01000129.1	Protein Homology	CDS	627	1247	.	-	0	ID=cds-WP_000235161.1;Parent=gene-C9F00_RS19415;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9F00_RS19415;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	1467	2102	.	+	.	ID=gene-C9F00_RS19420;Name=C9F00_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19420;old_locus_tag=C9F00_19885
NZ_PYKC01000129.1	Protein Homology	CDS	1467	2102	.	+	0	ID=cds-WP_001119446.1;Parent=gene-C9F00_RS19420;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9F00_RS19420;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	2152	3078	.	-	.	ID=gene-C9F00_RS19425;Name=C9F00_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19425;old_locus_tag=C9F00_19890
NZ_PYKC01000129.1	Protein Homology	CDS	2152	3078	.	-	0	ID=cds-WP_135369329.1;Parent=gene-C9F00_RS19425;Dbxref=GenBank:WP_135369329.1;Name=WP_135369329.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9F00_RS19425;product=DMT family transporter;protein_id=WP_135369329.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	3226	3675	.	-	.	ID=gene-C9F00_RS19430;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9F00_RS19430;old_locus_tag=C9F00_19895
NZ_PYKC01000129.1	Protein Homology	CDS	3226	3675	.	-	0	ID=cds-WP_001196059.1;Parent=gene-C9F00_RS19430;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9F00_RS19430;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	3717	3944	.	-	.	ID=gene-C9F00_RS19435;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9F00_RS19435;old_locus_tag=C9F00_19900
NZ_PYKC01000129.1	Protein Homology	CDS	3717	3944	.	-	0	ID=cds-WP_000135199.1;Parent=gene-C9F00_RS19435;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9F00_RS19435;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	3949	4263	.	-	.	ID=gene-C9F00_RS19440;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9F00_RS19440;old_locus_tag=C9F00_19905
NZ_PYKC01000129.1	Protein Homology	CDS	3949	4263	.	-	0	ID=cds-WP_001519453.1;Parent=gene-C9F00_RS19440;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9F00_RS19440;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	4270	4665	.	-	.	ID=gene-C9F00_RS19445;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9F00_RS19445;old_locus_tag=C9F00_19910
NZ_PYKC01000129.1	Protein Homology	CDS	4270	4665	.	-	0	ID=cds-WP_001216673.1;Parent=gene-C9F00_RS19445;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9F00_RS19445;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	5052	5327	.	+	.	ID=gene-C9F00_RS19450;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9F00_RS19450;old_locus_tag=C9F00_19915
NZ_PYKC01000129.1	Protein Homology	CDS	5052	5327	.	+	0	ID=cds-WP_000466074.1;Parent=gene-C9F00_RS19450;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9F00_RS19450;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	5381	5938	.	-	.	ID=gene-C9F00_RS19455;Name=C9F00_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19455;old_locus_tag=C9F00_19920
NZ_PYKC01000129.1	Protein Homology	CDS	5381	5938	.	-	0	ID=cds-WP_000026294.1;Parent=gene-C9F00_RS19455;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9F00_RS19455;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	6026	6712	.	-	.	ID=gene-C9F00_RS19460;Name=C9F00_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19460;old_locus_tag=C9F00_19925
NZ_PYKC01000129.1	Protein Homology	CDS	6026	6712	.	-	0	ID=cds-WP_001170771.1;Parent=gene-C9F00_RS19460;Dbxref=GenBank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9F00_RS19460;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	6712	7566	.	-	.	ID=gene-C9F00_RS19465;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9F00_RS19465;old_locus_tag=C9F00_19930
NZ_PYKC01000129.1	Protein Homology	CDS	6712	7566	.	-	0	ID=cds-WP_000949531.1;Parent=gene-C9F00_RS19465;Dbxref=GenBank:WP_000949531.1;Name=WP_000949531.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9F00_RS19465;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949531.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	7576	8226	.	-	.	ID=gene-C9F00_RS19470;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F00_RS19470;old_locus_tag=C9F00_19935
NZ_PYKC01000129.1	Protein Homology	CDS	7576	8226	.	-	0	ID=cds-WP_000056761.1;Parent=gene-C9F00_RS19470;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9F00_RS19470;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	8240	8704	.	-	.	ID=gene-C9F00_RS19475;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9F00_RS19475;old_locus_tag=C9F00_19940
NZ_PYKC01000129.1	Protein Homology	CDS	8240	8704	.	-	0	ID=cds-WP_000776531.1;Parent=gene-C9F00_RS19475;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9F00_RS19475;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	8714	9019	.	-	.	ID=gene-C9F00_RS19480;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9F00_RS19480;old_locus_tag=C9F00_19945
NZ_PYKC01000129.1	Protein Homology	CDS	8714	9019	.	-	0	ID=cds-WP_000218358.1;Parent=gene-C9F00_RS19480;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9F00_RS19480;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	9035	10432	.	-	.	ID=gene-C9F00_RS19485;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9F00_RS19485;old_locus_tag=C9F00_19950
NZ_PYKC01000129.1	Protein Homology	CDS	9035	10432	.	-	0	ID=cds-WP_000404873.1;Parent=gene-C9F00_RS19485;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9F00_RS19485;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	10795	11859	.	+	.	ID=gene-C9F00_RS19490;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=C9F00_RS19490;old_locus_tag=C9F00_19955
NZ_PYKC01000129.1	Protein Homology	CDS	10795	11859	.	+	0	ID=cds-WP_000049161.1;Parent=gene-C9F00_RS19490;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9F00_RS19490;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	11964	12719	.	+	.	ID=gene-C9F00_RS19495;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9F00_RS19495;old_locus_tag=C9F00_19960
NZ_PYKC01000129.1	Protein Homology	CDS	11964	12719	.	+	0	ID=cds-WP_000133618.1;Parent=gene-C9F00_RS19495;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9F00_RS19495;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	12716	13465	.	-	.	ID=gene-C9F00_RS19500;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9F00_RS19500;old_locus_tag=C9F00_19965
NZ_PYKC01000129.1	Protein Homology	CDS	12716	13465	.	-	0	ID=cds-WP_000560306.1;Parent=gene-C9F00_RS19500;Dbxref=GenBank:WP_000560306.1;Name=WP_000560306.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9F00_RS19500;product=esterase;protein_id=WP_000560306.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	13649	13978	.	+	.	ID=gene-C9F00_RS19505;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9F00_RS19505;old_locus_tag=C9F00_19970
NZ_PYKC01000129.1	Protein Homology	CDS	13649	13978	.	+	0	ID=cds-WP_000586835.1;Parent=gene-C9F00_RS19505;Dbxref=GenBank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9F00_RS19505;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	14109	14384	.	+	.	ID=gene-C9F00_RS19510;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9F00_RS19510;old_locus_tag=C9F00_19975
NZ_PYKC01000129.1	Protein Homology	CDS	14109	14384	.	+	0	ID=cds-WP_146713342.1;Parent=gene-C9F00_RS19510;Dbxref=GenBank:WP_146713342.1;Name=WP_146713342.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9F00_RS19510;product=DUF1471 family protease activator YjfN;protein_id=WP_146713342.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	14429	16051	.	-	.	ID=gene-C9F00_RS19515;Name=C9F00_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19515;old_locus_tag=C9F00_19980
NZ_PYKC01000129.1	Protein Homology	CDS	14429	16051	.	-	0	ID=cds-WP_061383260.1;Parent=gene-C9F00_RS19515;Dbxref=GenBank:WP_061383260.1;Name=WP_061383260.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9F00_RS19515;product=isovaleryl-CoA dehydrogenase;protein_id=WP_061383260.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	16136	17299	.	-	.	ID=gene-C9F00_RS19520;Name=C9F00_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19520;old_locus_tag=C9F00_19985
NZ_PYKC01000129.1	Protein Homology	CDS	16136	17299	.	-	0	ID=cds-WP_000943930.1;Parent=gene-C9F00_RS19520;Dbxref=GenBank:WP_000943930.1;Name=WP_000943930.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9F00_RS19520;product=glutathionylspermidine synthase family protein;protein_id=WP_000943930.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	17302	17940	.	-	.	ID=gene-C9F00_RS19525;Name=C9F00_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19525;old_locus_tag=C9F00_19990
NZ_PYKC01000129.1	Protein Homology	CDS	17302	17940	.	-	0	ID=cds-WP_001085596.1;Parent=gene-C9F00_RS19525;Dbxref=GenBank:WP_001085596.1;Name=WP_001085596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9F00_RS19525;product=DUF1190 domain-containing protein;protein_id=WP_001085596.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	17950	18348	.	-	.	ID=gene-C9F00_RS19530;Name=C9F00_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19530;old_locus_tag=C9F00_19995
NZ_PYKC01000129.1	Protein Homology	CDS	17950	18348	.	-	0	ID=cds-WP_000547737.1;Parent=gene-C9F00_RS19530;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9F00_RS19530;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	18366	19049	.	-	.	ID=gene-C9F00_RS19535;Name=C9F00_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19535;old_locus_tag=C9F00_20000
NZ_PYKC01000129.1	Protein Homology	CDS	18366	19049	.	-	0	ID=cds-WP_000090290.1;Parent=gene-C9F00_RS19535;Dbxref=GenBank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9F00_RS19535;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	19022	20092	.	-	.	ID=gene-C9F00_RS19540;Name=C9F00_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19540;old_locus_tag=C9F00_20005
NZ_PYKC01000129.1	Protein Homology	CDS	19022	20092	.	-	0	ID=cds-WP_000899674.1;Parent=gene-C9F00_RS19540;Dbxref=GenBank:WP_000899674.1;Name=WP_000899674.1;Ontology_term=GO:0034220,GO:0071805,GO:0005216,GO:0005267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA,potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9F00_RS19540;product=potassium channel family protein;protein_id=WP_000899674.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	20092	20790	.	-	.	ID=gene-C9F00_RS19545;Name=C9F00_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19545;old_locus_tag=C9F00_20010
NZ_PYKC01000129.1	Protein Homology	CDS	20092	20790	.	-	0	ID=cds-WP_135369327.1;Parent=gene-C9F00_RS19545;Dbxref=GenBank:WP_135369327.1;Name=WP_135369327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9F00_RS19545;product=PspA/IM30 family protein;protein_id=WP_135369327.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	20805	21209	.	-	.	ID=gene-C9F00_RS19550;Name=C9F00_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19550;old_locus_tag=C9F00_20015
NZ_PYKC01000129.1	Protein Homology	CDS	20805	21209	.	-	0	ID=cds-WP_001621793.1;Parent=gene-C9F00_RS19550;Dbxref=GenBank:WP_001621793.1;Name=WP_001621793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9F00_RS19550;product=YjfI family protein;protein_id=WP_001621793.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	21342	22073	.	-	.	ID=gene-C9F00_RS19555;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9F00_RS19555;old_locus_tag=C9F00_20020
NZ_PYKC01000129.1	Protein Homology	CDS	21342	22073	.	-	0	ID=cds-WP_001293277.1;Parent=gene-C9F00_RS19555;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9F00_RS19555;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	22164	24602	.	-	.	ID=gene-C9F00_RS19560;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9F00_RS19560;old_locus_tag=C9F00_20025
NZ_PYKC01000129.1	Protein Homology	CDS	22164	24602	.	-	0	ID=cds-WP_023261114.1;Parent=gene-C9F00_RS19560;Dbxref=GenBank:WP_023261114.1;Name=WP_023261114.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9F00_RS19560;product=ribonuclease R;protein_id=WP_023261114.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	24640	25065	.	-	.	ID=gene-C9F00_RS19565;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9F00_RS19565;old_locus_tag=C9F00_20030
NZ_PYKC01000129.1	Protein Homology	CDS	24640	25065	.	-	0	ID=cds-WP_001177632.1;Parent=gene-C9F00_RS19565;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9F00_RS19565;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	25280	26578	.	-	.	ID=gene-C9F00_RS19570;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9F00_RS19570;old_locus_tag=C9F00_20035
NZ_PYKC01000129.1	Protein Homology	CDS	25280	26578	.	-	0	ID=cds-WP_000527960.1;Parent=gene-C9F00_RS19570;Dbxref=GenBank:WP_000527960.1;Name=WP_000527960.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9F00_RS19570;product=adenylosuccinate synthase;protein_id=WP_000527960.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	26681	26878	.	-	.	ID=gene-C9F00_RS19575;Name=C9F00_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19575;old_locus_tag=C9F00_20040
NZ_PYKC01000129.1	Protein Homology	CDS	26681	26878	.	-	0	ID=cds-WP_001089290.1;Parent=gene-C9F00_RS19575;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9F00_RS19575;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	26957	27961	.	-	.	ID=gene-C9F00_RS19580;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9F00_RS19580;old_locus_tag=C9F00_20045
NZ_PYKC01000129.1	Protein Homology	CDS	26957	27961	.	-	0	ID=cds-WP_001232417.1;Parent=gene-C9F00_RS19580;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9F00_RS19580;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	27964	29223	.	-	.	ID=gene-C9F00_RS19585;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9F00_RS19585;old_locus_tag=C9F00_20050
NZ_PYKC01000129.1	Protein Homology	CDS	27964	29223	.	-	0	ID=cds-WP_000312505.1;Parent=gene-C9F00_RS19585;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9F00_RS19585;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	29438	30718	.	-	.	ID=gene-C9F00_RS19590;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9F00_RS19590;old_locus_tag=C9F00_20055
NZ_PYKC01000129.1	Protein Homology	CDS	29438	30718	.	-	0	ID=cds-WP_000460338.1;Parent=gene-C9F00_RS19590;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9F00_RS19590;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	30790	31098	.	-	.	ID=gene-C9F00_RS19595;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9F00_RS19595;old_locus_tag=C9F00_20060
NZ_PYKC01000129.1	Protein Homology	CDS	30790	31098	.	-	0	ID=cds-WP_001051875.1;Parent=gene-C9F00_RS19595;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9F00_RS19595;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	gene	31181	32131	.	-	.	ID=gene-C9F00_RS19600;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9F00_RS19600;old_locus_tag=C9F00_20065
NZ_PYKC01000129.1	Protein Homology	CDS	31181	32131	.	-	0	ID=cds-WP_001000734.1;Parent=gene-C9F00_RS19600;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9F00_RS19600;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11
NZ_PYKC01000129.1	RefSeq	pseudogene	32124	32667	.	-	.	ID=gene-C9F00_RS19605;Name=C9F00_RS19605;end_range=32667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS19605;old_locus_tag=C9F00_20070;partial=true;pseudo=true
NZ_PYKC01000129.1	Protein Homology	CDS	32124	32667	.	-	1	ID=cds-C9F00_RS19605;Parent=gene-C9F00_RS19605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=32667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9F00_RS19605;partial=true;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000069.1 1 90826
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000069.1	RefSeq	region	1	90826	.	+	.	ID=NZ_PYKC01000069.1:1..90826;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000069.1	RefSeq	pseudogene	1	1161	.	+	.	ID=gene-C9F00_RS11870;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=pseudogene;locus_tag=C9F00_RS11870;old_locus_tag=C9F00_12170;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000069.1	Protein Homology	CDS	1	1161	.	+	0	ID=cds-C9F00_RS11870;Parent=gene-C9F00_RS11870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F00_RS11870;partial=true;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000069.1	RefSeq	pseudogene	1291	1368	.	-	.	ID=gene-C9F00_RS24440;Name=C9F00_RS24440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24440;partial=true;pseudo=true;start_range=.,1291
NZ_PYKC01000069.1	Protein Homology	CDS	1291	1368	.	-	0	ID=cds-C9F00_RS24440;Parent=gene-C9F00_RS24440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9F00_RS24440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1291;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	1528	2958	.	+	.	ID=gene-C9F00_RS11875;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9F00_RS11875;old_locus_tag=C9F00_12175
NZ_PYKC01000069.1	Protein Homology	CDS	1528	2958	.	+	0	ID=cds-WP_000216699.1;Parent=gene-C9F00_RS11875;Dbxref=GenBank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9F00_RS11875;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	3094	4452	.	-	.	ID=gene-C9F00_RS11880;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=C9F00_RS11880;old_locus_tag=C9F00_12180
NZ_PYKC01000069.1	Protein Homology	CDS	3094	4452	.	-	0	ID=cds-WP_001519005.1;Parent=gene-C9F00_RS11880;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9F00_RS11880;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	4442	4504	.	-	.	ID=gene-C9F00_RS11885;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9F00_RS11885;old_locus_tag=C9F00_12185
NZ_PYKC01000069.1	Protein Homology	CDS	4442	4504	.	-	0	ID=cds-WP_096335044.1;Parent=gene-C9F00_RS11885;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9F00_RS11885;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	4738	5652	.	-	.	ID=gene-C9F00_RS11890;Name=C9F00_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11890;old_locus_tag=C9F00_12190
NZ_PYKC01000069.1	Protein Homology	CDS	4738	5652	.	-	0	ID=cds-WP_000803316.1;Parent=gene-C9F00_RS11890;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9F00_RS11890;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	5698	6522	.	-	.	ID=gene-C9F00_RS11895;Name=C9F00_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11895;old_locus_tag=C9F00_12195
NZ_PYKC01000069.1	Protein Homology	CDS	5698	6522	.	-	0	ID=cds-WP_000754712.1;Parent=gene-C9F00_RS11895;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9F00_RS11895;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	6685	6735	.	+	.	ID=gene-C9F00_RS11900;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9F00_RS11900;old_locus_tag=C9F00_12200
NZ_PYKC01000069.1	Protein Homology	CDS	6685	6735	.	+	0	ID=cds-WP_001364200.1;Parent=gene-C9F00_RS11900;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9F00_RS11900;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_PYKC01000069.1	cmsearch	sequence_feature	6711	6834	.	+	.	ID=id-NZ_PYKC01000069.1:6711..6834;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000069.1	RefSeq	gene	6881	7780	.	+	.	ID=gene-C9F00_RS11905;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9F00_RS11905;old_locus_tag=C9F00_12205
NZ_PYKC01000069.1	Protein Homology	CDS	6881	7780	.	+	0	ID=cds-WP_000886604.1;Parent=gene-C9F00_RS11905;Dbxref=GenBank:WP_000886604.1;Name=WP_000886604.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9F00_RS11905;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	7883	9187	.	+	.	ID=gene-C9F00_RS11910;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9F00_RS11910;old_locus_tag=C9F00_12210
NZ_PYKC01000069.1	Protein Homology	CDS	7883	9187	.	+	0	ID=cds-WP_000009618.1;Parent=gene-C9F00_RS11910;Dbxref=GenBank:WP_000009618.1;Name=WP_000009618.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9F00_RS11910;product=histidinol dehydrogenase;protein_id=WP_000009618.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	9184	10263	.	+	.	ID=gene-C9F00_RS11915;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9F00_RS11915;old_locus_tag=C9F00_12215
NZ_PYKC01000069.1	Protein Homology	CDS	9184	10263	.	+	0	ID=cds-WP_001580956.1;Parent=gene-C9F00_RS11915;Dbxref=GenBank:WP_001580956.1;Name=WP_001580956.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F00_RS11915;product=histidinol-phosphate transaminase;protein_id=WP_001580956.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	10260	11327	.	+	.	ID=gene-C9F00_RS11920;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9F00_RS11920;old_locus_tag=C9F00_12220
NZ_PYKC01000069.1	Protein Homology	CDS	10260	11327	.	+	0	ID=cds-WP_000080050.1;Parent=gene-C9F00_RS11920;Dbxref=GenBank:WP_000080050.1;Name=WP_000080050.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9F00_RS11920;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080050.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	11327	11917	.	+	.	ID=gene-C9F00_RS11925;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9F00_RS11925;old_locus_tag=C9F00_12225
NZ_PYKC01000069.1	Protein Homology	CDS	11327	11917	.	+	0	ID=cds-WP_063809125.1;Parent=gene-C9F00_RS11925;Dbxref=GenBank:WP_063809125.1;Name=WP_063809125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9F00_RS11925;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_063809125.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	11917	12654	.	+	.	ID=gene-C9F00_RS11930;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9F00_RS11930;old_locus_tag=C9F00_12230
NZ_PYKC01000069.1	Protein Homology	CDS	11917	12654	.	+	0	ID=cds-WP_135492310.1;Parent=gene-C9F00_RS11930;Dbxref=GenBank:WP_135492310.1;Name=WP_135492310.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9F00_RS11930;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_135492310.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	12636	13412	.	+	.	ID=gene-C9F00_RS11935;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9F00_RS11935;old_locus_tag=C9F00_12235
NZ_PYKC01000069.1	Protein Homology	CDS	12636	13412	.	+	0	ID=cds-WP_000880125.1;Parent=gene-C9F00_RS11935;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9F00_RS11935;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	13406	14017	.	+	.	ID=gene-C9F00_RS11940;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9F00_RS11940;old_locus_tag=C9F00_12240
NZ_PYKC01000069.1	Protein Homology	CDS	13406	14017	.	+	0	ID=cds-WP_000954846.1;Parent=gene-C9F00_RS11940;Dbxref=GenBank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9F00_RS11940;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	14098	15081	.	-	.	ID=gene-C9F00_RS11945;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9F00_RS11945;old_locus_tag=C9F00_12245
NZ_PYKC01000069.1	Protein Homology	CDS	14098	15081	.	-	0	ID=cds-WP_135369389.1;Parent=gene-C9F00_RS11945;Dbxref=GenBank:WP_135369389.1;Name=WP_135369389.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9F00_RS11945;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_135369389.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	15224	16390	.	-	.	ID=gene-C9F00_RS11950;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9F00_RS11950;old_locus_tag=C9F00_12250
NZ_PYKC01000069.1	Protein Homology	CDS	15224	16390	.	-	0	ID=cds-WP_135369390.1;Parent=gene-C9F00_RS11950;Dbxref=GenBank:WP_135369390.1;Name=WP_135369390.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9F00_RS11950;product=UDP-glucose 6-dehydrogenase;protein_id=WP_135369390.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	16627	18033	.	-	.	ID=gene-C9F00_RS11960;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9F00_RS11960;old_locus_tag=C9F00_12260
NZ_PYKC01000069.1	Protein Homology	CDS	16627	18033	.	-	0	ID=cds-WP_000043532.1;Parent=gene-C9F00_RS11960;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9F00_RS11960;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	18197	19627	.	-	.	ID=gene-C9F00_RS11965;Name=C9F00_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11965;old_locus_tag=C9F00_12265
NZ_PYKC01000069.1	Protein Homology	CDS	18197	19627	.	-	0	ID=cds-WP_000368703.1;Parent=gene-C9F00_RS11965;Dbxref=GenBank:WP_000368703.1;Name=WP_000368703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=C9F00_RS11965;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368703.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	19699	21132	.	-	.	ID=gene-C9F00_RS11970;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=C9F00_RS11970;old_locus_tag=C9F00_12270
NZ_PYKC01000069.1	Protein Homology	CDS	19699	21132	.	-	0	ID=cds-WP_135369037.1;Parent=gene-C9F00_RS11970;Dbxref=GenBank:WP_135369037.1;Name=WP_135369037.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=C9F00_RS11970;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_135369037.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	21119	22558	.	-	.	ID=gene-C9F00_RS11975;Name=C9F00_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11975;old_locus_tag=C9F00_12275
NZ_PYKC01000069.1	Protein Homology	CDS	21119	22558	.	-	0	ID=cds-WP_000009016.1;Parent=gene-C9F00_RS11975;Dbxref=GenBank:WP_000009016.1;Name=WP_000009016.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=C9F00_RS11975;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009016.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	22559	23503	.	-	.	ID=gene-C9F00_RS11980;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=C9F00_RS11980;old_locus_tag=C9F00_12280
NZ_PYKC01000069.1	Protein Homology	CDS	22559	23503	.	-	0	ID=cds-WP_000705151.1;Parent=gene-C9F00_RS11980;Dbxref=GenBank:WP_000705151.1;Name=WP_000705151.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=C9F00_RS11980;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705151.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	23504	24565	.	-	.	ID=gene-C9F00_RS11985;Name=C9F00_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11985;old_locus_tag=C9F00_12285
NZ_PYKC01000069.1	Protein Homology	CDS	23504	24565	.	-	0	ID=cds-WP_001521643.1;Parent=gene-C9F00_RS11985;Dbxref=GenBank:WP_001521643.1;Name=WP_001521643.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=C9F00_RS11985;product=glycosyltransferase family 4 protein;protein_id=WP_001521643.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	24886	25887	.	-	.	ID=gene-C9F00_RS11990;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=C9F00_RS11990;old_locus_tag=C9F00_12290
NZ_PYKC01000069.1	Protein Homology	CDS	24886	25887	.	-	0	ID=cds-WP_023201599.1;Parent=gene-C9F00_RS11990;Dbxref=GenBank:WP_023201599.1;Name=WP_023201599.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=C9F00_RS11990;product=abequosyltransferase RfbV;protein_id=WP_023201599.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	25892	27184	.	-	.	ID=gene-C9F00_RS11995;Name=C9F00_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11995;old_locus_tag=C9F00_12295
NZ_PYKC01000069.1	Protein Homology	CDS	25892	27184	.	-	0	ID=cds-WP_080110891.1;Parent=gene-C9F00_RS11995;Dbxref=GenBank:WP_080110891.1;Name=WP_080110891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=C9F00_RS11995;product=MATE family efflux transporter;protein_id=WP_080110891.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	27266	28165	.	-	.	ID=gene-C9F00_RS12000;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12000;old_locus_tag=C9F00_12300
NZ_PYKC01000069.1	Protein Homology	CDS	27266	28165	.	-	0	ID=cds-WP_000143399.1;Parent=gene-C9F00_RS12000;Dbxref=GenBank:WP_000143399.1;Name=WP_000143399.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=C9F00_RS12000;product=CDP-abequose synthase;protein_id=WP_000143399.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	28193	29506	.	-	.	ID=gene-C9F00_RS12005;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=C9F00_RS12005;old_locus_tag=C9F00_12305
NZ_PYKC01000069.1	Protein Homology	CDS	28193	29506	.	-	0	ID=cds-WP_000126349.1;Parent=gene-C9F00_RS12005;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=C9F00_RS12005;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	29533	30612	.	-	.	ID=gene-C9F00_RS12010;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=C9F00_RS12010;old_locus_tag=C9F00_12310
NZ_PYKC01000069.1	Protein Homology	CDS	29533	30612	.	-	0	ID=cds-WP_000565903.1;Parent=gene-C9F00_RS12010;Dbxref=GenBank:WP_000565903.1;Name=WP_000565903.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9F00_RS12010;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565903.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	30617	31390	.	-	.	ID=gene-C9F00_RS12015;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=C9F00_RS12015;old_locus_tag=C9F00_12315
NZ_PYKC01000069.1	Protein Homology	CDS	30617	31390	.	-	0	ID=cds-WP_000648784.1;Parent=gene-C9F00_RS12015;Dbxref=GenBank:WP_000648784.1;Name=WP_000648784.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=C9F00_RS12015;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648784.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	31387	32379	.	-	.	ID=gene-C9F00_RS12020;Name=C9F00_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12020;old_locus_tag=C9F00_12320
NZ_PYKC01000069.1	Protein Homology	CDS	31387	32379	.	-	0	ID=cds-WP_000018226.1;Parent=gene-C9F00_RS12020;Dbxref=GenBank:WP_000018226.1;Name=WP_000018226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=C9F00_RS12020;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_000018226.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	32385	32936	.	-	.	ID=gene-C9F00_RS12025;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=C9F00_RS12025;old_locus_tag=C9F00_12325
NZ_PYKC01000069.1	Protein Homology	CDS	32385	32936	.	-	0	ID=cds-WP_000973710.1;Parent=gene-C9F00_RS12025;Dbxref=GenBank:WP_000973710.1;Name=WP_000973710.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=C9F00_RS12025;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973710.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	32937	33815	.	-	.	ID=gene-C9F00_RS12030;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9F00_RS12030;old_locus_tag=C9F00_12330
NZ_PYKC01000069.1	Protein Homology	CDS	32937	33815	.	-	0	ID=cds-WP_000857535.1;Parent=gene-C9F00_RS12030;Dbxref=GenBank:WP_000857535.1;Name=WP_000857535.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=C9F00_RS12030;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857535.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	33863	34762	.	-	.	ID=gene-C9F00_RS12035;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=C9F00_RS12035;old_locus_tag=C9F00_12335
NZ_PYKC01000069.1	Protein Homology	CDS	33863	34762	.	-	0	ID=cds-WP_001023664.1;Parent=gene-C9F00_RS12035;Dbxref=GenBank:WP_001023664.1;Name=WP_001023664.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=C9F00_RS12035;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023664.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	34762	35847	.	-	.	ID=gene-C9F00_RS12040;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9F00_RS12040;old_locus_tag=C9F00_12340
NZ_PYKC01000069.1	Protein Homology	CDS	34762	35847	.	-	0	ID=cds-WP_000697846.1;Parent=gene-C9F00_RS12040;Dbxref=GenBank:WP_000697846.1;Name=WP_000697846.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=C9F00_RS12040;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	36224	37117	.	-	.	ID=gene-C9F00_RS12045;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9F00_RS12045;old_locus_tag=C9F00_12345
NZ_PYKC01000069.1	Protein Homology	CDS	36224	37117	.	-	0	ID=cds-WP_000981469.1;Parent=gene-C9F00_RS12045;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9F00_RS12045;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	37295	38698	.	-	.	ID=gene-C9F00_RS12050;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9F00_RS12050;old_locus_tag=C9F00_12350
NZ_PYKC01000069.1	Protein Homology	CDS	37295	38698	.	-	0	ID=cds-WP_135369710.1;Parent=gene-C9F00_RS12050;Dbxref=GenBank:WP_135369710.1;Name=WP_135369710.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9F00_RS12050;product=colanic acid biosynthesis protein WcaM;protein_id=WP_135369710.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	38709	39929	.	-	.	ID=gene-C9F00_RS12055;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9F00_RS12055;old_locus_tag=C9F00_12355
NZ_PYKC01000069.1	Protein Homology	CDS	38709	39929	.	-	0	ID=cds-WP_135369709.1;Parent=gene-C9F00_RS12055;Dbxref=GenBank:WP_135369709.1;Name=WP_135369709.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9F00_RS12055;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_135369709.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	39926	41206	.	-	.	ID=gene-C9F00_RS12060;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9F00_RS12060;old_locus_tag=C9F00_12360
NZ_PYKC01000069.1	Protein Homology	CDS	39926	41206	.	-	0	ID=cds-WP_020839236.1;Parent=gene-C9F00_RS12060;Dbxref=GenBank:WP_020839236.1;Name=WP_020839236.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F00_RS12060;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_020839236.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	41228	42706	.	-	.	ID=gene-C9F00_RS12065;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9F00_RS12065;old_locus_tag=C9F00_12365
NZ_PYKC01000069.1	Protein Homology	CDS	41228	42706	.	-	0	ID=cds-WP_023139021.1;Parent=gene-C9F00_RS12065;Dbxref=GenBank:WP_023139021.1;Name=WP_023139021.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9F00_RS12065;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_023139021.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	42808	44202	.	-	.	ID=gene-C9F00_RS12070;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS12070;old_locus_tag=C9F00_12370
NZ_PYKC01000069.1	Protein Homology	CDS	42808	44202	.	-	0	ID=cds-WP_135369708.1;Parent=gene-C9F00_RS12070;Dbxref=GenBank:WP_135369708.1;Name=WP_135369708.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9F00_RS12070;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_135369708.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	44256	45626	.	-	.	ID=gene-C9F00_RS12075;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=C9F00_RS12075;old_locus_tag=C9F00_12375
NZ_PYKC01000069.1	Protein Homology	CDS	44256	45626	.	-	0	ID=cds-WP_080184650.1;Parent=gene-C9F00_RS12075;Dbxref=GenBank:WP_080184650.1;Name=WP_080184650.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F00_RS12075;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_080184650.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	45737	47179	.	-	.	ID=gene-C9F00_RS12080;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9F00_RS12080;old_locus_tag=C9F00_12380
NZ_PYKC01000069.1	Protein Homology	CDS	45737	47179	.	-	0	ID=cds-WP_000605946.1;Parent=gene-C9F00_RS12080;Dbxref=GenBank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9F00_RS12080;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	pseudogene	47176	48399	.	-	.	ID=gene-C9F00_RS12085;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=pseudogene;locus_tag=C9F00_RS12085;old_locus_tag=C9F00_12385;pseudo=true
NZ_PYKC01000069.1	Protein Homology	CDS	47176	48399	.	-	0	ID=cds-C9F00_RS12085;Parent=gene-C9F00_RS12085;Note=internal stop;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9F00_RS12085;product=colanic acid biosynthesis fucosyltransferase WcaI;pseudo=true;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	48396	48869	.	-	.	ID=gene-C9F00_RS12090;Name=C9F00_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12090;old_locus_tag=C9F00_12390
NZ_PYKC01000069.1	Protein Homology	CDS	48396	48869	.	-	0	ID=cds-WP_001669238.1;Parent=gene-C9F00_RS12090;Dbxref=GenBank:WP_001669238.1;Name=WP_001669238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=C9F00_RS12090;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001669238.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	48872	49837	.	-	.	ID=gene-C9F00_RS12095;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=C9F00_RS12095;old_locus_tag=C9F00_12395
NZ_PYKC01000069.1	Protein Homology	CDS	48872	49837	.	-	0	ID=cds-WP_001041701.1;Parent=gene-C9F00_RS12095;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9F00_RS12095;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	49840	50961	.	-	.	ID=gene-C9F00_RS12100;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9F00_RS12100;old_locus_tag=C9F00_12400
NZ_PYKC01000069.1	Protein Homology	CDS	49840	50961	.	-	0	ID=cds-WP_000048160.1;Parent=gene-C9F00_RS12100;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9F00_RS12100;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	50985	51539	.	-	.	ID=gene-C9F00_RS12105;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9F00_RS12105;old_locus_tag=C9F00_12405
NZ_PYKC01000069.1	Protein Homology	CDS	50985	51539	.	-	0	ID=cds-WP_001153601.1;Parent=gene-C9F00_RS12105;Dbxref=GenBank:WP_001153601.1;Name=WP_001153601.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9F00_RS12105;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153601.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	51555	52301	.	-	.	ID=gene-C9F00_RS12110;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9F00_RS12110;old_locus_tag=C9F00_12410
NZ_PYKC01000069.1	Protein Homology	CDS	51555	52301	.	-	0	ID=cds-WP_135369706.1;Parent=gene-C9F00_RS12110;Dbxref=GenBank:WP_135369706.1;Name=WP_135369706.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9F00_RS12110;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_135369706.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	52314	53528	.	-	.	ID=gene-C9F00_RS12115;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9F00_RS12115;old_locus_tag=C9F00_12415
NZ_PYKC01000069.1	Protein Homology	CDS	52314	53528	.	-	0	ID=cds-WP_000091403.1;Parent=gene-C9F00_RS12115;Dbxref=GenBank:WP_000091403.1;Name=WP_000091403.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9F00_RS12115;product=colanic acid polymerase WcaD;protein_id=WP_000091403.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	53503	54720	.	-	.	ID=gene-C9F00_RS12120;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9F00_RS12120;old_locus_tag=C9F00_12420
NZ_PYKC01000069.1	Protein Homology	CDS	53503	54720	.	-	0	ID=cds-WP_023261720.1;Parent=gene-C9F00_RS12120;Dbxref=GenBank:WP_023261720.1;Name=WP_023261720.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9F00_RS12120;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023261720.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	54717	55205	.	-	.	ID=gene-C9F00_RS12125;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=C9F00_RS12125;old_locus_tag=C9F00_12425
NZ_PYKC01000069.1	Protein Homology	CDS	54717	55205	.	-	0	ID=cds-WP_000888725.1;Parent=gene-C9F00_RS12125;Dbxref=GenBank:WP_000888725.1;Name=WP_000888725.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=C9F00_RS12125;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888725.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	55208	56050	.	-	.	ID=gene-C9F00_RS12130;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9F00_RS12130;old_locus_tag=C9F00_12430
NZ_PYKC01000069.1	Protein Homology	CDS	55208	56050	.	-	0	ID=cds-WP_000205695.1;Parent=gene-C9F00_RS12130;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F00_RS12130;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	56137	58296	.	-	.	ID=gene-C9F00_RS12135;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9F00_RS12135;old_locus_tag=C9F00_12435
NZ_PYKC01000069.1	Protein Homology	CDS	56137	58296	.	-	0	ID=cds-WP_135369705.1;Parent=gene-C9F00_RS12135;Dbxref=GenBank:WP_135369705.1;Name=WP_135369705.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9F00_RS12135;product=tyrosine-protein kinase Wzc;protein_id=WP_135369705.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	58293	58742	.	-	.	ID=gene-C9F00_RS12140;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9F00_RS12140;old_locus_tag=C9F00_12440
NZ_PYKC01000069.1	Protein Homology	CDS	58293	58742	.	-	0	ID=cds-WP_000482224.1;Parent=gene-C9F00_RS12140;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9F00_RS12140;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	58748	59887	.	-	.	ID=gene-C9F00_RS12145;Name=C9F00_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12145;old_locus_tag=C9F00_12445
NZ_PYKC01000069.1	Protein Homology	CDS	58748	59887	.	-	0	ID=cds-WP_000978077.1;Parent=gene-C9F00_RS12145;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9F00_RS12145;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	60562	62142	.	+	.	ID=gene-C9F00_RS12150;Name=C9F00_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12150;old_locus_tag=C9F00_12455
NZ_PYKC01000069.1	Protein Homology	CDS	60562	62142	.	+	0	ID=cds-WP_000454713.1;Parent=gene-C9F00_RS12150;Dbxref=GenBank:WP_000454713.1;Name=WP_000454713.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9F00_RS12150;product=TerC family protein;protein_id=WP_000454713.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	62228	64084	.	-	.	ID=gene-C9F00_RS12155;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9F00_RS12155;old_locus_tag=C9F00_12460
NZ_PYKC01000069.1	Protein Homology	CDS	62228	64084	.	-	0	ID=cds-WP_135369374.1;Parent=gene-C9F00_RS12155;Dbxref=GenBank:WP_135369374.1;Name=WP_135369374.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F00_RS12155;product=outer membrane assembly protein AsmA;protein_id=WP_135369374.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	64123	64704	.	-	.	ID=gene-C9F00_RS12160;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9F00_RS12160;old_locus_tag=C9F00_12465
NZ_PYKC01000069.1	Protein Homology	CDS	64123	64704	.	-	0	ID=cds-WP_001234783.1;Parent=gene-C9F00_RS12160;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9F00_RS12160;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	64795	65436	.	-	.	ID=gene-C9F00_RS12165;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9F00_RS12165;old_locus_tag=C9F00_12470
NZ_PYKC01000069.1	Protein Homology	CDS	64795	65436	.	-	0	ID=cds-WP_000132082.1;Parent=gene-C9F00_RS12165;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9F00_RS12165;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	65767	68757	.	+	.	ID=gene-C9F00_RS12170;Name=C9F00_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12170;old_locus_tag=C9F00_12475
NZ_PYKC01000069.1	Protein Homology	CDS	65767	68757	.	+	0	ID=cds-WP_135369373.1;Parent=gene-C9F00_RS12170;Dbxref=GenBank:WP_135369373.1;Name=WP_135369373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9F00_RS12170;product=MASE1 domain-containing protein;protein_id=WP_135369373.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	68725	69594	.	-	.	ID=gene-C9F00_RS12175;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9F00_RS12175;old_locus_tag=C9F00_12480
NZ_PYKC01000069.1	Protein Homology	CDS	68725	69594	.	-	0	ID=cds-WP_135369372.1;Parent=gene-C9F00_RS12175;Dbxref=GenBank:WP_135369372.1;Name=WP_135369372.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F00_RS12175;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_135369372.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	69728	71080	.	+	.	ID=gene-C9F00_RS12180;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9F00_RS12180;old_locus_tag=C9F00_12490
NZ_PYKC01000069.1	Protein Homology	CDS	69728	71080	.	+	0	ID=cds-WP_079954417.1;Parent=gene-C9F00_RS12180;Dbxref=GenBank:WP_079954417.1;Name=WP_079954417.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9F00_RS12180;product=molecular chaperone;protein_id=WP_079954417.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	71179	71238	.	-	.	ID=gene-C9F00_RS12185;Name=C9F00_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12185
NZ_PYKC01000069.1	Protein Homology	CDS	71179	71238	.	-	0	ID=cds-WP_105887528.1;Parent=gene-C9F00_RS12185;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9F00_RS12185;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	71521	72762	.	+	.	ID=gene-C9F00_RS12190;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=C9F00_RS12190;old_locus_tag=C9F00_12495
NZ_PYKC01000069.1	Protein Homology	CDS	71521	72762	.	+	0	ID=cds-WP_135369371.1;Parent=gene-C9F00_RS12190;Dbxref=GenBank:WP_135369371.1;Name=WP_135369371.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9F00_RS12190;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_135369371.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	72762	75884	.	+	.	ID=gene-C9F00_RS12195;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=C9F00_RS12195;old_locus_tag=C9F00_12500
NZ_PYKC01000069.1	Protein Homology	CDS	72762	75884	.	+	0	ID=cds-WP_001197797.1;Parent=gene-C9F00_RS12195;Dbxref=GenBank:WP_001197797.1;Name=WP_001197797.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9F00_RS12195;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197797.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	75885	78965	.	+	.	ID=gene-C9F00_RS12200;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9F00_RS12200;old_locus_tag=C9F00_12505
NZ_PYKC01000069.1	Protein Homology	CDS	75885	78965	.	+	0	ID=cds-WP_135420195.1;Parent=gene-C9F00_RS12200;Dbxref=GenBank:WP_135420195.1;Name=WP_135420195.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F00_RS12200;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_135420195.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	78962	80374	.	+	.	ID=gene-C9F00_RS12205;Name=C9F00_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12205;old_locus_tag=C9F00_12510
NZ_PYKC01000069.1	Protein Homology	CDS	78962	80374	.	+	0	ID=cds-WP_000137818.1;Parent=gene-C9F00_RS12205;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9F00_RS12205;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	80374	81777	.	+	.	ID=gene-C9F00_RS12210;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9F00_RS12210;old_locus_tag=C9F00_12515
NZ_PYKC01000069.1	Protein Homology	CDS	80374	81777	.	+	0	ID=cds-WP_135492312.1;Parent=gene-C9F00_RS12210;Dbxref=GenBank:WP_135492312.1;Name=WP_135492312.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9F00_RS12210;product=two-component system sensor histidine kinase BaeS;protein_id=WP_135492312.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	81774	82496	.	+	.	ID=gene-C9F00_RS12215;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=C9F00_RS12215;old_locus_tag=C9F00_12520
NZ_PYKC01000069.1	Protein Homology	CDS	81774	82496	.	+	0	ID=cds-WP_000137854.1;Parent=gene-C9F00_RS12215;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9F00_RS12215;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	82765	83967	.	+	.	ID=gene-C9F00_RS12225;Name=C9F00_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12225;old_locus_tag=C9F00_12530
NZ_PYKC01000069.1	Protein Homology	CDS	82765	83967	.	+	0	ID=cds-WP_167850417.1;Parent=gene-C9F00_RS12225;Dbxref=GenBank:WP_167850417.1;Name=WP_167850417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9F00_RS12225;product=PcfJ domain-containing protein;protein_id=WP_167850417.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	83967	84683	.	+	.	ID=gene-C9F00_RS12230;Name=C9F00_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12230;old_locus_tag=C9F00_12535
NZ_PYKC01000069.1	Protein Homology	CDS	83967	84683	.	+	0	ID=cds-WP_000498587.1;Parent=gene-C9F00_RS12230;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9F00_RS12230;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	84694	86805	.	+	.	ID=gene-C9F00_RS12235;Name=C9F00_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12235;old_locus_tag=C9F00_12540
NZ_PYKC01000069.1	Protein Homology	CDS	84694	86805	.	+	0	ID=cds-WP_135369543.1;Parent=gene-C9F00_RS12235;Dbxref=GenBank:WP_135369543.1;Name=WP_135369543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F00_RS12235;product=DUF4034 domain-containing protein;protein_id=WP_135369543.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	86810	87529	.	+	.	ID=gene-C9F00_RS12240;Name=C9F00_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12240;old_locus_tag=C9F00_12545
NZ_PYKC01000069.1	Protein Homology	CDS	86810	87529	.	+	0	ID=cds-WP_135369542.1;Parent=gene-C9F00_RS12240;Dbxref=GenBank:WP_135369542.1;Name=WP_135369542.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=C9F00_RS12240;product=tetratricopeptide repeat protein;protein_id=WP_135369542.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	87660	88340	.	-	.	ID=gene-C9F00_RS12245;Name=C9F00_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12245;old_locus_tag=C9F00_12550
NZ_PYKC01000069.1	Protein Homology	CDS	87660	88340	.	-	0	ID=cds-WP_431194531.1;Parent=gene-C9F00_RS12245;Dbxref=GenBank:WP_431194531.1;Name=WP_431194531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805504.1;locus_tag=C9F00_RS12245;product=hypothetical protein;protein_id=WP_431194531.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	pseudogene	88513	88713	.	-	.	ID=gene-C9F00_RS24445;Name=C9F00_RS24445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24445;old_locus_tag=C9F00_12555;partial=true;pseudo=true;start_range=.,88513
NZ_PYKC01000069.1	Protein Homology	CDS	88513	88713	.	-	0	ID=cds-C9F00_RS24445;Parent=gene-C9F00_RS24445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=C9F00_RS24445;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,88513;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	88852	89349	.	-	.	ID=gene-C9F00_RS12255;Name=C9F00_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12255;old_locus_tag=C9F00_12560
NZ_PYKC01000069.1	Protein Homology	CDS	88852	89349	.	-	0	ID=cds-WP_057935541.1;Parent=gene-C9F00_RS12255;Dbxref=GenBank:WP_057935541.1;Name=WP_057935541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037626.1;locus_tag=C9F00_RS12255;product=hypothetical protein;protein_id=WP_057935541.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	89544	89921	.	-	.	ID=gene-C9F00_RS12260;Name=C9F00_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12260;old_locus_tag=C9F00_12565
NZ_PYKC01000069.1	Protein Homology	CDS	89544	89921	.	-	0	ID=cds-WP_061380351.1;Parent=gene-C9F00_RS12260;Dbxref=GenBank:WP_061380351.1;Name=WP_061380351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357876.1;locus_tag=C9F00_RS12260;product=hypothetical protein;protein_id=WP_061380351.1;transl_table=11
NZ_PYKC01000069.1	RefSeq	gene	90290	90724	.	-	.	ID=gene-C9F00_RS12265;Name=C9F00_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS12265;old_locus_tag=C9F00_12570
NZ_PYKC01000069.1	Protein Homology	CDS	90290	90724	.	-	0	ID=cds-WP_024158441.1;Parent=gene-C9F00_RS12265;Dbxref=GenBank:WP_024158441.1;Name=WP_024158441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213035.1;locus_tag=C9F00_RS12265;product=sel1 repeat family protein;protein_id=WP_024158441.1;transl_table=11
##sequence-region NZ_PYKC01000092.1 1 32395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000092.1	RefSeq	region	1	32395	.	+	.	ID=NZ_PYKC01000092.1:1..32395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000092.1	RefSeq	pseudogene	1	461	.	+	.	ID=gene-C9F00_RS14920;Name=C9F00_RS14920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14920;old_locus_tag=C9F00_15270;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000092.1	Protein Homology	CDS	1	461	.	+	2	ID=cds-C9F00_RS14920;Parent=gene-C9F00_RS14920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F00_RS14920;partial=true;product=potassium-transporting ATPase subunit KdpB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	470	1054	.	+	.	ID=gene-C9F00_RS14925;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9F00_RS14925;old_locus_tag=C9F00_15275
NZ_PYKC01000092.1	Protein Homology	CDS	470	1054	.	+	0	ID=cds-WP_000579804.1;Parent=gene-C9F00_RS14925;Dbxref=GenBank:WP_000579804.1;Name=WP_000579804.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9F00_RS14925;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_000579804.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	1051	3735	.	+	.	ID=gene-C9F00_RS14930;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9F00_RS14930;old_locus_tag=C9F00_15280
NZ_PYKC01000092.1	Protein Homology	CDS	1051	3735	.	+	0	ID=cds-WP_135492368.1;Parent=gene-C9F00_RS14930;Dbxref=GenBank:WP_135492368.1;Name=WP_135492368.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9F00_RS14930;product=two-component system sensor histidine kinase KdpD;protein_id=WP_135492368.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	3732	4409	.	+	.	ID=gene-C9F00_RS14935;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=C9F00_RS14935;old_locus_tag=C9F00_15285
NZ_PYKC01000092.1	Protein Homology	CDS	3732	4409	.	+	0	ID=cds-WP_000186059.1;Parent=gene-C9F00_RS14935;Dbxref=GenBank:WP_000186059.1;Name=WP_000186059.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9F00_RS14935;product=two-component system response regulator KdpE;protein_id=WP_000186059.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	4687	4791	.	+	.	ID=gene-C9F00_RS14940;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9F00_RS14940
NZ_PYKC01000092.1	Protein Homology	CDS	4687	4791	.	+	0	ID=cds-WP_015632840.1;Parent=gene-C9F00_RS14940;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9F00_RS14940;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	5171	7369	.	+	.	ID=gene-C9F00_RS14945;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9F00_RS14945;old_locus_tag=C9F00_15290
NZ_PYKC01000092.1	Protein Homology	CDS	5171	7369	.	+	0	ID=cds-WP_001292402.1;Parent=gene-C9F00_RS14945;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9F00_RS14945;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	7366	8685	.	+	.	ID=gene-C9F00_RS14950;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F00_RS14950;old_locus_tag=C9F00_15295
NZ_PYKC01000092.1	Protein Homology	CDS	7366	8685	.	+	0	ID=cds-WP_135369759.1;Parent=gene-C9F00_RS14950;Dbxref=GenBank:WP_135369759.1;Name=WP_135369759.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9F00_RS14950;product=putrescine-ornithine antiporter;protein_id=WP_135369759.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	8750	9235	.	+	.	ID=gene-C9F00_RS14955;Name=C9F00_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14955;old_locus_tag=C9F00_15300
NZ_PYKC01000092.1	Protein Homology	CDS	8750	9235	.	+	0	ID=cds-WP_000070052.1;Parent=gene-C9F00_RS14955;Dbxref=GenBank:WP_000070052.1;Name=WP_000070052.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9F00_RS14955;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070052.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	9350	10990	.	-	.	ID=gene-C9F00_RS14960;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9F00_RS14960;old_locus_tag=C9F00_15305
NZ_PYKC01000092.1	Protein Homology	CDS	9350	10990	.	-	0	ID=cds-WP_000974385.1;Parent=gene-C9F00_RS14960;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9F00_RS14960;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	11015	11557	.	-	.	ID=gene-C9F00_RS14965;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9F00_RS14965;old_locus_tag=C9F00_15310
NZ_PYKC01000092.1	Protein Homology	CDS	11015	11557	.	-	0	ID=cds-WP_000848395.1;Parent=gene-C9F00_RS14965;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9F00_RS14965;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	11742	12512	.	+	.	ID=gene-C9F00_RS14970;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9F00_RS14970;old_locus_tag=C9F00_15315
NZ_PYKC01000092.1	Protein Homology	CDS	11742	12512	.	+	0	ID=cds-WP_000773245.1;Parent=gene-C9F00_RS14970;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9F00_RS14970;product=esterase;protein_id=WP_000773245.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	12646	12939	.	+	.	ID=gene-C9F00_RS14975;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9F00_RS14975;old_locus_tag=C9F00_15320
NZ_PYKC01000092.1	Protein Homology	CDS	12646	12939	.	+	0	ID=cds-WP_001040939.1;Parent=gene-C9F00_RS14975;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9F00_RS14975;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	13090	13620	.	+	.	ID=gene-C9F00_RS14980;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9F00_RS14980;old_locus_tag=C9F00_15325
NZ_PYKC01000092.1	Protein Homology	CDS	13090	13620	.	+	0	ID=cds-WP_001018621.1;Parent=gene-C9F00_RS14980;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9F00_RS14980;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	pseudogene	13824	13909	.	+	.	ID=gene-C9F00_RS24210;Name=C9F00_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24210;pseudo=true
NZ_PYKC01000092.1	Protein Homology	CDS	13824	13909	.	+	0	ID=cds-C9F00_RS24210;Parent=gene-C9F00_RS24210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9F00_RS24210;product=fur leader peptide;pseudo=true;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	13902	14354	.	+	.	ID=gene-C9F00_RS14985;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9F00_RS14985;old_locus_tag=C9F00_15330
NZ_PYKC01000092.1	Protein Homology	CDS	13902	14354	.	+	0	ID=cds-WP_000131699.1;Parent=gene-C9F00_RS14985;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9F00_RS14985;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	14469	15395	.	+	.	ID=gene-C9F00_RS14990;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9F00_RS14990;old_locus_tag=C9F00_15335
NZ_PYKC01000092.1	Protein Homology	CDS	14469	15395	.	+	0	ID=cds-WP_000423365.1;Parent=gene-C9F00_RS14990;Dbxref=GenBank:WP_000423365.1;Name=WP_000423365.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9F00_RS14990;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423365.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	15493	16896	.	+	.	ID=gene-C9F00_RS14995;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9F00_RS14995;old_locus_tag=C9F00_15340
NZ_PYKC01000092.1	Protein Homology	CDS	15493	16896	.	+	0	ID=cds-WP_000228705.1;Parent=gene-C9F00_RS14995;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9F00_RS14995;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	16883	18022	.	+	.	ID=gene-C9F00_RS15000;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9F00_RS15000;old_locus_tag=C9F00_15345
NZ_PYKC01000092.1	Protein Homology	CDS	16883	18022	.	+	0	ID=cds-WP_000811134.1;Parent=gene-C9F00_RS15000;Dbxref=GenBank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9F00_RS15000;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	18073	19377	.	+	.	ID=gene-C9F00_RS15005;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9F00_RS15005;old_locus_tag=C9F00_15350
NZ_PYKC01000092.1	Protein Homology	CDS	18073	19377	.	+	0	ID=cds-WP_023258592.1;Parent=gene-C9F00_RS15005;Dbxref=GenBank:WP_023258592.1;Name=WP_023258592.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9F00_RS15005;product=tricarballylate/proton symporter TcuC;protein_id=WP_023258592.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	19426	19758	.	-	.	ID=gene-C9F00_RS15010;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9F00_RS15010;old_locus_tag=C9F00_15355
NZ_PYKC01000092.1	Protein Homology	CDS	19426	19758	.	-	0	ID=cds-WP_000722258.1;Parent=gene-C9F00_RS15010;Dbxref=GenBank:WP_000722258.1;Name=WP_000722258.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9F00_RS15010;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722258.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	19808	21214	.	-	.	ID=gene-C9F00_RS15015;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9F00_RS15015;old_locus_tag=C9F00_15360
NZ_PYKC01000092.1	Protein Homology	CDS	19808	21214	.	-	0	ID=cds-WP_001258803.1;Parent=gene-C9F00_RS15015;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9F00_RS15015;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	21666	23333	.	-	.	ID=gene-C9F00_RS15020;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9F00_RS15020;old_locus_tag=C9F00_15370
NZ_PYKC01000092.1	Protein Homology	CDS	21666	23333	.	-	0	ID=cds-WP_001287181.1;Parent=gene-C9F00_RS15020;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9F00_RS15020;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	23544	25496	.	-	.	ID=gene-C9F00_RS15025;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9F00_RS15025;old_locus_tag=C9F00_15375
NZ_PYKC01000092.1	Protein Homology	CDS	23544	25496	.	-	0	ID=cds-WP_135369760.1;Parent=gene-C9F00_RS15025;Dbxref=GenBank:WP_135369760.1;Name=WP_135369760.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9F00_RS15025;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_135369760.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	25823	26623	.	+	.	ID=gene-C9F00_RS15030;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9F00_RS15030;old_locus_tag=C9F00_15380
NZ_PYKC01000092.1	Protein Homology	CDS	25823	26623	.	+	0	ID=cds-WP_001237059.1;Parent=gene-C9F00_RS15030;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9F00_RS15030;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	26683	27837	.	+	.	ID=gene-C9F00_RS15035;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9F00_RS15035;old_locus_tag=C9F00_15385
NZ_PYKC01000092.1	Protein Homology	CDS	26683	27837	.	+	0	ID=cds-WP_135492370.1;Parent=gene-C9F00_RS15035;Dbxref=GenBank:WP_135492370.1;Name=WP_135492370.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9F00_RS15035;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_135492370.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	27842	29062	.	+	.	ID=gene-C9F00_RS15040;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9F00_RS15040;old_locus_tag=C9F00_15390
NZ_PYKC01000092.1	Protein Homology	CDS	27842	29062	.	+	0	ID=cds-WP_000187578.1;Parent=gene-C9F00_RS15040;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9F00_RS15040;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	29109	29861	.	+	.	ID=gene-C9F00_RS15045;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9F00_RS15045;old_locus_tag=C9F00_15395
NZ_PYKC01000092.1	Protein Homology	CDS	29109	29861	.	+	0	ID=cds-WP_000153143.1;Parent=gene-C9F00_RS15045;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9F00_RS15045;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	30151	31815	.	+	.	ID=gene-C9F00_RS15050;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9F00_RS15050;old_locus_tag=C9F00_15400
NZ_PYKC01000092.1	Protein Homology	CDS	30151	31815	.	+	0	ID=cds-WP_135369761.1;Parent=gene-C9F00_RS15050;Dbxref=GenBank:WP_135369761.1;Name=WP_135369761.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9F00_RS15050;product=asparagine synthase B;protein_id=WP_135369761.1;transl_table=11
NZ_PYKC01000092.1	RefSeq	gene	32037	32113	.	+	.	ID=gene-C9F00_RS15055;Name=C9F00_RS15055;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS15055;old_locus_tag=C9F00_15405
NZ_PYKC01000092.1	tRNAscan-SE	tRNA	32037	32113	.	+	.	ID=rna-C9F00_RS15055;Parent=gene-C9F00_RS15055;anticodon=(pos:32071..32073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15055;product=tRNA-Met
NZ_PYKC01000092.1	tRNAscan-SE	exon	32037	32113	.	+	.	ID=exon-C9F00_RS15055-1;Parent=rna-C9F00_RS15055;anticodon=(pos:32071..32073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15055;product=tRNA-Met
NZ_PYKC01000092.1	RefSeq	gene	32122	32206	.	+	.	ID=gene-C9F00_RS15060;Name=C9F00_RS15060;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS15060;old_locus_tag=C9F00_15410
NZ_PYKC01000092.1	tRNAscan-SE	tRNA	32122	32206	.	+	.	ID=rna-C9F00_RS15060;Parent=gene-C9F00_RS15060;anticodon=(pos:32156..32158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15060;product=tRNA-Leu
NZ_PYKC01000092.1	tRNAscan-SE	exon	32122	32206	.	+	.	ID=exon-C9F00_RS15060-1;Parent=rna-C9F00_RS15060;anticodon=(pos:32156..32158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15060;product=tRNA-Leu
NZ_PYKC01000092.1	RefSeq	gene	32230	32304	.	+	.	ID=gene-C9F00_RS15065;Name=C9F00_RS15065;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS15065;old_locus_tag=C9F00_15415
NZ_PYKC01000092.1	tRNAscan-SE	tRNA	32230	32304	.	+	.	ID=rna-C9F00_RS15065;Parent=gene-C9F00_RS15065;anticodon=(pos:32262..32264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15065;product=tRNA-Gln
NZ_PYKC01000092.1	tRNAscan-SE	exon	32230	32304	.	+	.	ID=exon-C9F00_RS15065-1;Parent=rna-C9F00_RS15065;anticodon=(pos:32262..32264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15065;product=tRNA-Gln
NZ_PYKC01000092.1	RefSeq	gene	32320	32393	.	+	.	ID=gene-C9F00_RS15070;Name=C9F00_RS15070;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS15070;old_locus_tag=C9F00_15420
NZ_PYKC01000092.1	tRNAscan-SE	tRNA	32320	32393	.	+	.	ID=rna-C9F00_RS15070;Parent=gene-C9F00_RS15070;anticodon=(pos:32354..32356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15070;product=tRNA-Met
NZ_PYKC01000092.1	tRNAscan-SE	exon	32320	32393	.	+	.	ID=exon-C9F00_RS15070-1;Parent=rna-C9F00_RS15070;anticodon=(pos:32354..32356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS15070;product=tRNA-Met
##sequence-region NZ_PYKC01000055.1 1 32256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000055.1	RefSeq	region	1	32256	.	+	.	ID=NZ_PYKC01000055.1:1..32256;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000055.1	RefSeq	pseudogene	38	457	.	-	.	ID=gene-C9F00_RS09080;Name=C9F00_RS09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS09080;old_locus_tag=C9F00_09275;partial=true;pseudo=true;start_range=.,38
NZ_PYKC01000055.1	Protein Homology	CDS	38	457	.	-	0	ID=cds-C9F00_RS09080;Parent=gene-C9F00_RS09080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F00_RS09080;partial=true;product=glycine--tRNA ligase subunit beta;pseudo=true;start_range=.,38;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	467	1378	.	-	.	ID=gene-C9F00_RS09085;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9F00_RS09085;old_locus_tag=C9F00_09280
NZ_PYKC01000055.1	Protein Homology	CDS	467	1378	.	-	0	ID=cds-WP_001168551.1;Parent=gene-C9F00_RS09085;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9F00_RS09085;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	1517	1819	.	-	.	ID=gene-C9F00_RS09090;Name=C9F00_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09090;old_locus_tag=C9F00_09285
NZ_PYKC01000055.1	Protein Homology	CDS	1517	1819	.	-	0	ID=cds-WP_000605590.1;Parent=gene-C9F00_RS09090;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9F00_RS09090;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	1985	2980	.	+	.	ID=gene-C9F00_RS09100;Name=C9F00_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09100;old_locus_tag=C9F00_09295
NZ_PYKC01000055.1	Protein Homology	CDS	1985	2980	.	+	0	ID=cds-WP_135369444.1;Parent=gene-C9F00_RS09100;Dbxref=GenBank:WP_135369444.1;Name=WP_135369444.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9F00_RS09100;product=acyltransferase;protein_id=WP_135369444.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	3001	3354	.	-	.	ID=gene-C9F00_RS09105;Name=C9F00_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09105;old_locus_tag=C9F00_09300
NZ_PYKC01000055.1	Protein Homology	CDS	3001	3354	.	-	0	ID=cds-WP_001635944.1;Parent=gene-C9F00_RS09105;Dbxref=GenBank:WP_001635944.1;Name=WP_001635944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9F00_RS09105;product=YiaA/YiaB family protein;protein_id=WP_001635944.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	3529	4983	.	-	.	ID=gene-C9F00_RS09110;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9F00_RS09110;old_locus_tag=C9F00_09305
NZ_PYKC01000055.1	Protein Homology	CDS	3529	4983	.	-	0	ID=cds-WP_135369443.1;Parent=gene-C9F00_RS09110;Dbxref=GenBank:WP_135369443.1;Name=WP_135369443.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9F00_RS09110;product=xylulokinase;protein_id=WP_135369443.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	5083	6405	.	-	.	ID=gene-C9F00_RS09115;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9F00_RS09115;old_locus_tag=C9F00_09310
NZ_PYKC01000055.1	Protein Homology	CDS	5083	6405	.	-	0	ID=cds-WP_135492253.1;Parent=gene-C9F00_RS09115;Dbxref=GenBank:WP_135492253.1;Name=WP_135492253.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9F00_RS09115;product=xylose isomerase;protein_id=WP_135492253.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	6768	7946	.	+	.	ID=gene-C9F00_RS09125;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=C9F00_RS09125;old_locus_tag=C9F00_09320
NZ_PYKC01000055.1	Protein Homology	CDS	6768	7946	.	+	0	ID=cds-WP_000459824.1;Parent=gene-C9F00_RS09125;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9F00_RS09125;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	8007	8831	.	-	.	ID=gene-C9F00_RS09130;Name=C9F00_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09130;old_locus_tag=C9F00_09325
NZ_PYKC01000055.1	Protein Homology	CDS	8007	8831	.	-	0	ID=cds-WP_001575119.1;Parent=gene-C9F00_RS09130;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9F00_RS09130;product=protein bax;protein_id=WP_001575119.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	9147	11174	.	+	.	ID=gene-C9F00_RS09135;Name=C9F00_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09135;old_locus_tag=C9F00_09335
NZ_PYKC01000055.1	Protein Homology	CDS	9147	11174	.	+	0	ID=cds-WP_135369442.1;Parent=gene-C9F00_RS09135;Dbxref=GenBank:WP_135369442.1;Name=WP_135369442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F00_RS09135;product=alpha-amylase;protein_id=WP_135369442.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	11348	12598	.	+	.	ID=gene-C9F00_RS09140;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9F00_RS09140;old_locus_tag=C9F00_09340
NZ_PYKC01000055.1	Protein Homology	CDS	11348	12598	.	+	0	ID=cds-WP_000144381.1;Parent=gene-C9F00_RS09140;Dbxref=GenBank:WP_000144381.1;Name=WP_000144381.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9F00_RS09140;product=valine--pyruvate transaminase;protein_id=WP_000144381.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	12635	13108	.	-	.	ID=gene-C9F00_RS09145;Name=C9F00_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09145;old_locus_tag=C9F00_09345
NZ_PYKC01000055.1	Protein Homology	CDS	12635	13108	.	-	0	ID=cds-WP_001078812.1;Parent=gene-C9F00_RS09145;Dbxref=GenBank:WP_001078812.1;Name=WP_001078812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9F00_RS09145;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078812.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	13225	14031	.	-	.	ID=gene-C9F00_RS09150;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS09150;old_locus_tag=C9F00_09350
NZ_PYKC01000055.1	Protein Homology	CDS	13225	14031	.	-	0	ID=cds-WP_001748894.1;Parent=gene-C9F00_RS09150;Dbxref=GenBank:WP_001748894.1;Name=WP_001748894.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9F00_RS09150;product=IclR family transcriptional regulator YiaJ;protein_id=WP_001748894.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	14261	15259	.	+	.	ID=gene-C9F00_RS09155;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9F00_RS09155;old_locus_tag=C9F00_09355
NZ_PYKC01000055.1	Protein Homology	CDS	14261	15259	.	+	0	ID=cds-WP_000869012.1;Parent=gene-C9F00_RS09155;Dbxref=GenBank:WP_000869012.1;Name=WP_000869012.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9F00_RS09155;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869012.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	15271	15735	.	+	.	ID=gene-C9F00_RS09160;Name=C9F00_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09160;old_locus_tag=C9F00_09360
NZ_PYKC01000055.1	Protein Homology	CDS	15271	15735	.	+	0	ID=cds-WP_000576102.1;Parent=gene-C9F00_RS09160;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9F00_RS09160;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	15759	16700	.	+	.	ID=gene-C9F00_RS09165;Name=C9F00_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09165;old_locus_tag=C9F00_09365
NZ_PYKC01000055.1	Protein Homology	CDS	15759	16700	.	+	0	ID=cds-WP_001748895.1;Parent=gene-C9F00_RS09165;Dbxref=GenBank:WP_001748895.1;Name=WP_001748895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466038.1;locus_tag=C9F00_RS09165;product=DUF4862 family protein;protein_id=WP_001748895.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	16829	17302	.	+	.	ID=gene-C9F00_RS09170;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9F00_RS09170;old_locus_tag=C9F00_09370
NZ_PYKC01000055.1	Protein Homology	CDS	16829	17302	.	+	0	ID=cds-WP_000832316.1;Parent=gene-C9F00_RS09170;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9F00_RS09170;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	17305	18582	.	+	.	ID=gene-C9F00_RS09175;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9F00_RS09175;old_locus_tag=C9F00_09375
NZ_PYKC01000055.1	Protein Homology	CDS	17305	18582	.	+	0	ID=cds-WP_000301822.1;Parent=gene-C9F00_RS09175;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9F00_RS09175;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	18594	19580	.	+	.	ID=gene-C9F00_RS09180;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=C9F00_RS09180;old_locus_tag=C9F00_09380
NZ_PYKC01000055.1	Protein Homology	CDS	18594	19580	.	+	0	ID=cds-WP_000766340.1;Parent=gene-C9F00_RS09180;Dbxref=GenBank:WP_000766340.1;Name=WP_000766340.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9F00_RS09180;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766340.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	19584	21080	.	+	.	ID=gene-C9F00_RS09185;Name=C9F00_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09185;old_locus_tag=C9F00_09385
NZ_PYKC01000055.1	Protein Homology	CDS	19584	21080	.	+	0	ID=cds-WP_135492255.1;Parent=gene-C9F00_RS09185;Dbxref=GenBank:WP_135492255.1;Name=WP_135492255.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9F00_RS09185;product=FGGY-family carbohydrate kinase;protein_id=WP_135492255.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	21077	21739	.	+	.	ID=gene-C9F00_RS09190;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F00_RS09190;old_locus_tag=C9F00_09390
NZ_PYKC01000055.1	Protein Homology	CDS	21077	21739	.	+	0	ID=cds-WP_000089527.1;Parent=gene-C9F00_RS09190;Dbxref=GenBank:WP_000089527.1;Name=WP_000089527.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9F00_RS09190;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089527.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	21732	22592	.	+	.	ID=gene-C9F00_RS09195;Name=C9F00_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09195;old_locus_tag=C9F00_09395
NZ_PYKC01000055.1	Protein Homology	CDS	21732	22592	.	+	0	ID=cds-WP_023241061.1;Parent=gene-C9F00_RS09195;Dbxref=GenBank:WP_023241061.1;Name=WP_023241061.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9F00_RS09195;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023241061.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	22586	23281	.	+	.	ID=gene-C9F00_RS09200;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F00_RS09200;old_locus_tag=C9F00_09400
NZ_PYKC01000055.1	Protein Homology	CDS	22586	23281	.	+	0	ID=cds-WP_135369441.1;Parent=gene-C9F00_RS09200;Dbxref=GenBank:WP_135369441.1;Name=WP_135369441.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9F00_RS09200;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_135369441.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	23442	24257	.	-	.	ID=gene-C9F00_RS09205;Name=C9F00_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09205;old_locus_tag=C9F00_09405
NZ_PYKC01000055.1	Protein Homology	CDS	23442	24257	.	-	0	ID=cds-WP_135369440.1;Parent=gene-C9F00_RS09205;Dbxref=GenBank:WP_135369440.1;Name=WP_135369440.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9F00_RS09205;product=AraC family transcriptional regulator;protein_id=WP_135369440.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	24521	26476	.	+	.	ID=gene-C9F00_RS09210;Name=C9F00_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09210;old_locus_tag=C9F00_09410
NZ_PYKC01000055.1	Protein Homology	CDS	24521	26476	.	+	0	ID=cds-WP_001650977.1;Parent=gene-C9F00_RS09210;Dbxref=GenBank:WP_001650977.1;Name=WP_001650977.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9F00_RS09210;product=glycoside hydrolase family 127 protein;protein_id=WP_001650977.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	26594	28132	.	-	.	ID=gene-C9F00_RS09215;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9F00_RS09215;old_locus_tag=C9F00_09415
NZ_PYKC01000055.1	Protein Homology	CDS	26594	28132	.	-	0	ID=cds-WP_000183988.1;Parent=gene-C9F00_RS09215;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9F00_RS09215;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	28301	29182	.	+	.	ID=gene-C9F00_RS09220;Name=C9F00_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS09220;old_locus_tag=C9F00_09420
NZ_PYKC01000055.1	Protein Homology	CDS	28301	29182	.	+	0	ID=cds-WP_001188269.1;Parent=gene-C9F00_RS09220;Dbxref=GenBank:WP_001188269.1;Name=WP_001188269.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9F00_RS09220;product=ROK family protein;protein_id=WP_001188269.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	29457	31307	.	-	.	ID=gene-C9F00_RS09225;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9F00_RS09225;old_locus_tag=C9F00_09425
NZ_PYKC01000055.1	Protein Homology	CDS	29457	31307	.	-	0	ID=cds-WP_001608726.1;Parent=gene-C9F00_RS09225;Dbxref=GenBank:WP_001608726.1;Name=WP_001608726.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9F00_RS09225;product=selenocysteine-specific translation elongation factor;protein_id=WP_001608726.1;transl_table=11
NZ_PYKC01000055.1	RefSeq	gene	31304	32256	.	-	.	ID=gene-C9F00_RS09230;Name=selA;end_range=32256,.;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9F00_RS09230;old_locus_tag=C9F00_09430;partial=true
NZ_PYKC01000055.1	Protein Homology	CDS	31304	32256	.	-	2	ID=cds-WP_135492257.1;Parent=gene-C9F00_RS09230;Dbxref=GenBank:WP_135492257.1;Name=WP_135492257.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;end_range=32256,.;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9F00_RS09230;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_135492257.1;transl_table=11
##sequence-region NZ_PYKC01000017.1 1 31663
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000017.1	RefSeq	region	1	31663	.	+	.	ID=NZ_PYKC01000017.1:1..31663;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000017.1	RefSeq	gene	1	769	.	+	.	ID=gene-C9F00_RS03555;Name=C9F00_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03555;old_locus_tag=C9F00_03600;partial=true;start_range=.,1
NZ_PYKC01000017.1	Protein Homology	CDS	1	769	.	+	1	ID=cds-WP_210114157.1;Parent=gene-C9F00_RS03555;Dbxref=GenBank:WP_210114157.1;Name=WP_210114157.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F00_RS03555;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_210114157.1;start_range=.,1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	943	2949	.	+	.	ID=gene-C9F00_RS03565;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9F00_RS03565;old_locus_tag=C9F00_03610
NZ_PYKC01000017.1	Protein Homology	CDS	943	2949	.	+	0	ID=cds-WP_001266361.1;Parent=gene-C9F00_RS03565;Dbxref=GenBank:WP_001266361.1;Name=WP_001266361.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9F00_RS03565;product=biofilm formation regulator HmsP;protein_id=WP_001266361.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	3107	4393	.	+	.	ID=gene-C9F00_RS03570;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9F00_RS03570;old_locus_tag=C9F00_03615
NZ_PYKC01000017.1	Protein Homology	CDS	3107	4393	.	+	0	ID=cds-WP_000858228.1;Parent=gene-C9F00_RS03570;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9F00_RS03570;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	4613	6100	.	+	.	ID=gene-C9F00_RS03575;Name=C9F00_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03575;old_locus_tag=C9F00_03620
NZ_PYKC01000017.1	Protein Homology	CDS	4613	6100	.	+	0	ID=cds-WP_123220466.1;Parent=gene-C9F00_RS03575;Dbxref=GenBank:WP_123220466.1;Name=WP_123220466.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9F00_RS03575;product=M16 family metallopeptidase;protein_id=WP_123220466.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	6154	7083	.	-	.	ID=gene-C9F00_RS03580;Name=C9F00_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03580;old_locus_tag=C9F00_03625
NZ_PYKC01000017.1	Protein Homology	CDS	6154	7083	.	-	0	ID=cds-WP_135369454.1;Parent=gene-C9F00_RS03580;Dbxref=GenBank:WP_135369454.1;Name=WP_135369454.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9F00_RS03580;product=sugar kinase;protein_id=WP_135369454.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	7312	8079	.	+	.	ID=gene-C9F00_RS03585;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9F00_RS03585;old_locus_tag=C9F00_03630
NZ_PYKC01000017.1	Protein Homology	CDS	7312	8079	.	+	0	ID=cds-WP_000595626.1;Parent=gene-C9F00_RS03585;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9F00_RS03585;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	8189	10249	.	+	.	ID=gene-C9F00_RS03590;Name=C9F00_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03590;old_locus_tag=C9F00_03635
NZ_PYKC01000017.1	Protein Homology	CDS	8189	10249	.	+	0	ID=cds-WP_115408920.1;Parent=gene-C9F00_RS03590;Dbxref=GenBank:WP_115408920.1;Name=WP_115408920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F00_RS03590;product=AsmA family protein;protein_id=WP_115408920.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	10289	11611	.	-	.	ID=gene-C9F00_RS03595;Name=C9F00_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03595;old_locus_tag=C9F00_03640
NZ_PYKC01000017.1	Protein Homology	CDS	10289	11611	.	-	0	ID=cds-WP_079897585.1;Parent=gene-C9F00_RS03595;Dbxref=GenBank:WP_079897585.1;Name=WP_079897585.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9F00_RS03595;product=MFS transporter;protein_id=WP_079897585.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	11962	12990	.	-	.	ID=gene-C9F00_RS03600;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9F00_RS03600;old_locus_tag=C9F00_03645
NZ_PYKC01000017.1	Protein Homology	CDS	11962	12990	.	-	0	ID=cds-WP_000191231.1;Parent=gene-C9F00_RS03600;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9F00_RS03600;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	13063	13962	.	-	.	ID=gene-C9F00_RS03605;Name=C9F00_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03605;old_locus_tag=C9F00_03650
NZ_PYKC01000017.1	Protein Homology	CDS	13063	13962	.	-	0	ID=cds-WP_167850411.1;Parent=gene-C9F00_RS03605;Dbxref=GenBank:WP_167850411.1;Name=WP_167850411.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9F00_RS03605;product=LysR family transcriptional regulator;protein_id=WP_167850411.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	14053	14223	.	-	.	ID=gene-C9F00_RS24045;Name=C9F00_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24045
NZ_PYKC01000017.1	GeneMarkS-2+	CDS	14053	14223	.	-	0	ID=cds-WP_153246886.1;Parent=gene-C9F00_RS24045;Dbxref=GenBank:WP_153246886.1;Name=WP_153246886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24045;product=hypothetical protein;protein_id=WP_153246886.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	14593	15195	.	+	.	ID=gene-C9F00_RS03615;Name=C9F00_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03615;old_locus_tag=C9F00_03660
NZ_PYKC01000017.1	Protein Homology	CDS	14593	15195	.	+	0	ID=cds-WP_001196084.1;Parent=gene-C9F00_RS03615;Dbxref=GenBank:WP_001196084.1;Name=WP_001196084.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9F00_RS03615;product=helix-turn-helix transcriptional regulator;protein_id=WP_001196084.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	15201	15557	.	-	.	ID=gene-C9F00_RS03620;Name=C9F00_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03620;old_locus_tag=C9F00_03665
NZ_PYKC01000017.1	Protein Homology	CDS	15201	15557	.	-	0	ID=cds-WP_001120249.1;Parent=gene-C9F00_RS03620;Dbxref=GenBank:WP_001120249.1;Name=WP_001120249.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9F00_RS03620;product=glycoside hydrolase family protein;protein_id=WP_001120249.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	15838	17427	.	+	.	ID=gene-C9F00_RS03625;Name=C9F00_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03625;old_locus_tag=C9F00_03670
NZ_PYKC01000017.1	Protein Homology	CDS	15838	17427	.	+	0	ID=cds-WP_023232293.1;Parent=gene-C9F00_RS03625;Dbxref=GenBank:WP_023232293.1;Name=WP_023232293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F00_RS03625;product=STY4199 family HEPN domain-containing protein;protein_id=WP_023232293.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	17440	19089	.	-	.	ID=gene-C9F00_RS03630;Name=C9F00_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03630;old_locus_tag=C9F00_03675
NZ_PYKC01000017.1	Protein Homology	CDS	17440	19089	.	-	0	ID=cds-WP_000934257.1;Parent=gene-C9F00_RS03630;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9F00_RS03630;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	19416	20135	.	+	.	ID=gene-C9F00_RS03635;Name=C9F00_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03635;old_locus_tag=C9F00_03680
NZ_PYKC01000017.1	Protein Homology	CDS	19416	20135	.	+	0	ID=cds-WP_000572568.1;Parent=gene-C9F00_RS03635;Dbxref=GenBank:WP_000572568.1;Name=WP_000572568.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F00_RS03635;product=GntR family transcriptional regulator;protein_id=WP_000572568.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	20311	21288	.	+	.	ID=gene-C9F00_RS03640;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9F00_RS03640;old_locus_tag=C9F00_03685
NZ_PYKC01000017.1	Protein Homology	CDS	20311	21288	.	+	0	ID=cds-WP_077248388.1;Parent=gene-C9F00_RS03640;Dbxref=GenBank:WP_077248388.1;Name=WP_077248388.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9F00_RS03640;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077248388.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	21352	22197	.	+	.	ID=gene-C9F00_RS03645;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9F00_RS03645;old_locus_tag=C9F00_03690
NZ_PYKC01000017.1	Protein Homology	CDS	21352	22197	.	+	0	ID=cds-WP_023232291.1;Parent=gene-C9F00_RS03645;Dbxref=GenBank:WP_023232291.1;Name=WP_023232291.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9F00_RS03645;product=fructose-aspartate kinase;protein_id=WP_023232291.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	22251	23570	.	+	.	ID=gene-C9F00_RS03650;Name=C9F00_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03650;old_locus_tag=C9F00_03695
NZ_PYKC01000017.1	Protein Homology	CDS	22251	23570	.	+	0	ID=cds-WP_000498935.1;Parent=gene-C9F00_RS03650;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F00_RS03650;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	23629	24672	.	+	.	ID=gene-C9F00_RS03655;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=C9F00_RS03655;old_locus_tag=C9F00_03700
NZ_PYKC01000017.1	Protein Homology	CDS	23629	24672	.	+	0	ID=cds-WP_023232290.1;Parent=gene-C9F00_RS03655;Dbxref=GenBank:WP_023232290.1;Name=WP_023232290.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F00_RS03655;product=fructose-asparagine asparaginase;protein_id=WP_023232290.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	24719	26071	.	-	.	ID=gene-C9F00_RS03660;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9F00_RS03660;old_locus_tag=C9F00_03705
NZ_PYKC01000017.1	Protein Homology	CDS	24719	26071	.	-	0	ID=cds-WP_017441621.1;Parent=gene-C9F00_RS03660;Dbxref=GenBank:WP_017441621.1;Name=WP_017441621.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9F00_RS03660;product=glutathione-disulfide reductase;protein_id=WP_017441621.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	26176	27018	.	-	.	ID=gene-C9F00_RS03665;Name=C9F00_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03665;old_locus_tag=C9F00_03710
NZ_PYKC01000017.1	Protein Homology	CDS	26176	27018	.	-	0	ID=cds-WP_000954235.1;Parent=gene-C9F00_RS03665;Dbxref=GenBank:WP_000954235.1;Name=WP_000954235.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9F00_RS03665;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	27139	27582	.	-	.	ID=gene-C9F00_RS03670;Name=C9F00_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03670;old_locus_tag=C9F00_03715
NZ_PYKC01000017.1	Protein Homology	CDS	27139	27582	.	-	0	ID=cds-WP_000209571.1;Parent=gene-C9F00_RS03670;Dbxref=GenBank:WP_000209571.1;Name=WP_000209571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209569.1;locus_tag=C9F00_RS03670;product=hypothetical protein;protein_id=WP_000209571.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	27860	28513	.	+	.	ID=gene-C9F00_RS03675;Name=C9F00_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03675;old_locus_tag=C9F00_03720
NZ_PYKC01000017.1	Protein Homology	CDS	27860	28513	.	+	0	ID=cds-WP_000469192.1;Parent=gene-C9F00_RS03675;Dbxref=GenBank:WP_000469192.1;Name=WP_000469192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=C9F00_RS03675;product=hypothetical protein;protein_id=WP_000469192.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	28676	30718	.	+	.	ID=gene-C9F00_RS03680;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=C9F00_RS03680;old_locus_tag=C9F00_03725
NZ_PYKC01000017.1	Protein Homology	CDS	28676	30718	.	+	0	ID=cds-WP_000184178.1;Parent=gene-C9F00_RS03680;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9F00_RS03680;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11
NZ_PYKC01000017.1	RefSeq	gene	30725	31483	.	+	.	ID=gene-C9F00_RS03685;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9F00_RS03685;old_locus_tag=C9F00_03730
NZ_PYKC01000017.1	Protein Homology	CDS	30725	31483	.	+	0	ID=cds-WP_001165127.1;Parent=gene-C9F00_RS03685;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9F00_RS03685;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11
##sequence-region NZ_PYKC01000173.1 1 31630
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000173.1	RefSeq	region	1	31630	.	+	.	ID=NZ_PYKC01000173.1:1..31630;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000173.1	RefSeq	gene	111	869	.	-	.	ID=gene-C9F00_RS23860;Name=C9F00_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23860;old_locus_tag=C9F00_24415
NZ_PYKC01000173.1	Protein Homology	CDS	111	869	.	-	0	ID=cds-WP_000701824.1;Parent=gene-C9F00_RS23860;Dbxref=GenBank:WP_000701824.1;Name=WP_000701824.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9F00_RS23860;product=M48 family metallopeptidase;protein_id=WP_000701824.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	1145	3136	.	+	.	ID=gene-C9F00_RS23865;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9F00_RS23865;old_locus_tag=C9F00_24420
NZ_PYKC01000173.1	Protein Homology	CDS	1145	3136	.	+	0	ID=cds-WP_135492579.1;Parent=gene-C9F00_RS23865;Dbxref=GenBank:WP_135492579.1;Name=WP_135492579.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9F00_RS23865;product=transketolase;protein_id=WP_135492579.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	3180	3836	.	-	.	ID=gene-C9F00_RS23870;Name=C9F00_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23870;old_locus_tag=C9F00_24425
NZ_PYKC01000173.1	Protein Homology	CDS	3180	3836	.	-	0	ID=cds-WP_023244889.1;Parent=gene-C9F00_RS23870;Dbxref=GenBank:WP_023244889.1;Name=WP_023244889.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9F00_RS23870;product=ABC transporter ATP-binding protein;protein_id=WP_023244889.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	3830	4507	.	-	.	ID=gene-C9F00_RS23875;Name=C9F00_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23875;old_locus_tag=C9F00_24430
NZ_PYKC01000173.1	Protein Homology	CDS	3830	4507	.	-	0	ID=cds-WP_167850728.1;Parent=gene-C9F00_RS23875;Dbxref=GenBank:WP_167850728.1;Name=WP_167850728.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9F00_RS23875;product=ABC transporter ATP-binding protein;protein_id=WP_167850728.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	4495	5202	.	-	.	ID=gene-C9F00_RS23880;Name=C9F00_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23880;old_locus_tag=C9F00_24435
NZ_PYKC01000173.1	Protein Homology	CDS	4495	5202	.	-	0	ID=cds-WP_001524856.1;Parent=gene-C9F00_RS23880;Dbxref=GenBank:WP_001524856.1;Name=WP_001524856.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9F00_RS23880;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_001524856.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	5203	5781	.	-	.	ID=gene-C9F00_RS23885;Name=C9F00_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23885;old_locus_tag=C9F00_24440
NZ_PYKC01000173.1	Protein Homology	CDS	5203	5781	.	-	0	ID=cds-WP_000124001.1;Parent=gene-C9F00_RS23885;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9F00_RS23885;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	5807	6232	.	-	.	ID=gene-C9F00_RS23890;Name=C9F00_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23890;old_locus_tag=C9F00_24445
NZ_PYKC01000173.1	Protein Homology	CDS	5807	6232	.	-	0	ID=cds-WP_000218567.1;Parent=gene-C9F00_RS23890;Dbxref=GenBank:WP_000218567.1;Name=WP_000218567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9F00_RS23890;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218567.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	6606	7652	.	+	.	ID=gene-C9F00_RS23900;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9F00_RS23900;old_locus_tag=C9F00_24455
NZ_PYKC01000173.1	Protein Homology	CDS	6606	7652	.	+	0	ID=cds-WP_000218338.1;Parent=gene-C9F00_RS23900;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9F00_RS23900;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	7674	8837	.	+	.	ID=gene-C9F00_RS23905;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9F00_RS23905;old_locus_tag=C9F00_24460
NZ_PYKC01000173.1	Protein Homology	CDS	7674	8837	.	+	0	ID=cds-WP_000111274.1;Parent=gene-C9F00_RS23905;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9F00_RS23905;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	8939	10018	.	+	.	ID=gene-C9F00_RS23910;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9F00_RS23910;old_locus_tag=C9F00_24465
NZ_PYKC01000173.1	Protein Homology	CDS	8939	10018	.	+	0	ID=cds-WP_000034386.1;Parent=gene-C9F00_RS23910;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9F00_RS23910;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	10245	11105	.	+	.	ID=gene-C9F00_RS23915;Name=C9F00_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23915;old_locus_tag=C9F00_24470
NZ_PYKC01000173.1	Protein Homology	CDS	10245	11105	.	+	0	ID=cds-WP_000389833.1;Parent=gene-C9F00_RS23915;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9F00_RS23915;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	11305	11940	.	+	.	ID=gene-C9F00_RS23920;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=C9F00_RS23920;old_locus_tag=C9F00_24475
NZ_PYKC01000173.1	Protein Homology	CDS	11305	11940	.	+	0	ID=cds-WP_000626863.1;Parent=gene-C9F00_RS23920;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9F00_RS23920;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	12034	12780	.	+	.	ID=gene-C9F00_RS23925;Name=C9F00_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23925;old_locus_tag=C9F00_24480
NZ_PYKC01000173.1	Protein Homology	CDS	12034	12780	.	+	0	ID=cds-WP_000669854.1;Parent=gene-C9F00_RS23925;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9F00_RS23925;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	13046	13939	.	-	.	ID=gene-C9F00_RS23935;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9F00_RS23935;old_locus_tag=C9F00_24490
NZ_PYKC01000173.1	Protein Homology	CDS	13046	13939	.	-	0	ID=cds-WP_000828345.1;Parent=gene-C9F00_RS23935;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9F00_RS23935;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	14093	14752	.	+	.	ID=gene-C9F00_RS23940;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9F00_RS23940;old_locus_tag=C9F00_24495
NZ_PYKC01000173.1	Protein Homology	CDS	14093	14752	.	+	0	ID=cds-WP_000189741.1;Parent=gene-C9F00_RS23940;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9F00_RS23940;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	15019	16251	.	+	.	ID=gene-C9F00_RS23945;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9F00_RS23945;old_locus_tag=C9F00_24500
NZ_PYKC01000173.1	Protein Homology	CDS	15019	16251	.	+	0	ID=cds-WP_001151627.1;Parent=gene-C9F00_RS23945;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9F00_RS23945;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	16632	17228	.	-	.	ID=gene-C9F00_RS23950;Name=C9F00_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23950;old_locus_tag=C9F00_24505
NZ_PYKC01000173.1	Protein Homology	CDS	16632	17228	.	-	0	ID=cds-WP_001536377.1;Parent=gene-C9F00_RS23950;Dbxref=GenBank:WP_001536377.1;Name=WP_001536377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9F00_RS23950;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001536377.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	17249	17432	.	-	.	ID=gene-C9F00_RS23955;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9F00_RS23955;old_locus_tag=C9F00_24510
NZ_PYKC01000173.1	cmsearch	ncRNA	17249	17432	.	-	.	ID=rna-C9F00_RS23955;Parent=gene-C9F00_RS23955;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS23955;product=6S RNA
NZ_PYKC01000173.1	cmsearch	exon	17249	17432	.	-	.	ID=exon-C9F00_RS23955-1;Parent=rna-C9F00_RS23955;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS23955;product=6S RNA
NZ_PYKC01000173.1	RefSeq	gene	17474	17803	.	-	.	ID=gene-C9F00_RS23960;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9F00_RS23960;old_locus_tag=C9F00_24515
NZ_PYKC01000173.1	Protein Homology	CDS	17474	17803	.	-	0	ID=cds-WP_001276011.1;Parent=gene-C9F00_RS23960;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9F00_RS23960;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	17970	18548	.	+	.	ID=gene-C9F00_RS23965;Name=C9F00_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23965;old_locus_tag=C9F00_24525
NZ_PYKC01000173.1	Protein Homology	CDS	17970	18548	.	+	0	ID=cds-WP_000027236.1;Parent=gene-C9F00_RS23965;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9F00_RS23965;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	18574	19890	.	+	.	ID=gene-C9F00_RS23970;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9F00_RS23970;old_locus_tag=C9F00_24530
NZ_PYKC01000173.1	Protein Homology	CDS	18574	19890	.	+	0	ID=cds-WP_135492583.1;Parent=gene-C9F00_RS23970;Dbxref=GenBank:WP_135492583.1;Name=WP_135492583.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9F00_RS23970;product=Xaa-Pro aminopeptidase;protein_id=WP_135492583.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	19887	21065	.	+	.	ID=gene-C9F00_RS23975;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9F00_RS23975;old_locus_tag=C9F00_24535
NZ_PYKC01000173.1	Protein Homology	CDS	19887	21065	.	+	0	ID=cds-WP_000111140.1;Parent=gene-C9F00_RS23975;Dbxref=GenBank:WP_000111140.1;Name=WP_000111140.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9F00_RS23975;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111140.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	21191	22393	.	+	.	ID=gene-C9F00_RS23980;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9F00_RS23980;old_locus_tag=C9F00_24540
NZ_PYKC01000173.1	Protein Homology	CDS	21191	22393	.	+	0	ID=cds-WP_001192144.1;Parent=gene-C9F00_RS23980;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9F00_RS23980;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	22848	23942	.	+	.	ID=gene-C9F00_RS23985;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9F00_RS23985;old_locus_tag=C9F00_24545
NZ_PYKC01000173.1	Protein Homology	CDS	22848	23942	.	+	0	ID=cds-WP_000068738.1;Parent=gene-C9F00_RS23985;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9F00_RS23985;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	23968	24357	.	+	.	ID=gene-C9F00_RS23990;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9F00_RS23990;old_locus_tag=C9F00_24550
NZ_PYKC01000173.1	Protein Homology	CDS	23968	24357	.	+	0	ID=cds-WP_001295377.1;Parent=gene-C9F00_RS23990;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9F00_RS23990;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	24520	27393	.	+	.	ID=gene-C9F00_RS23995;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9F00_RS23995;old_locus_tag=C9F00_24555
NZ_PYKC01000173.1	Protein Homology	CDS	24520	27393	.	+	0	ID=cds-WP_000194975.1;Parent=gene-C9F00_RS23995;Dbxref=GenBank:WP_000194975.1;Name=WP_000194975.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F00_RS23995;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000194975.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	27849	28742	.	+	.	ID=gene-C9F00_RS24005;Name=C9F00_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24005;old_locus_tag=C9F00_24565
NZ_PYKC01000173.1	Protein Homology	CDS	27849	28742	.	+	0	ID=cds-WP_079840015.1;Parent=gene-C9F00_RS24005;Dbxref=GenBank:WP_079840015.1;Name=WP_079840015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9F00_RS24005;product=transporter;protein_id=WP_079840015.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	28790	30223	.	-	.	ID=gene-C9F00_RS24010;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9F00_RS24010;old_locus_tag=C9F00_24570
NZ_PYKC01000173.1	Protein Homology	CDS	28790	30223	.	-	0	ID=cds-WP_135369165.1;Parent=gene-C9F00_RS24010;Dbxref=GenBank:WP_135369165.1;Name=WP_135369165.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F00_RS24010;product=6-phospho-beta-glucosidase BglA;protein_id=WP_135369165.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	30381	30692	.	+	.	ID=gene-C9F00_RS24015;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9F00_RS24015;old_locus_tag=C9F00_24575
NZ_PYKC01000173.1	Protein Homology	CDS	30381	30692	.	+	0	ID=cds-WP_001182976.1;Parent=gene-C9F00_RS24015;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9F00_RS24015;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11
NZ_PYKC01000173.1	RefSeq	gene	30856	31515	.	+	.	ID=gene-C9F00_RS24020;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=C9F00_RS24020;old_locus_tag=C9F00_24580
NZ_PYKC01000173.1	Protein Homology	CDS	30856	31515	.	+	0	ID=cds-WP_000250289.1;Parent=gene-C9F00_RS24020;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9F00_RS24020;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11
##sequence-region NZ_PYKC01000166.1 1 411
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000166.1	RefSeq	region	1	411	.	+	.	ID=NZ_PYKC01000166.1:1..411;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000166.1	RefSeq	gene	1	307	.	-	.	ID=gene-C9F00_RS24925;Name=C9F00_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24925;old_locus_tag=C9F00_24050;partial=true;start_range=.,1
NZ_PYKC01000166.1	Protein Homology	CDS	1	307	.	-	0	ID=cds-WP_432430824.1;Parent=gene-C9F00_RS24925;Dbxref=GenBank:WP_432430824.1;Name=WP_432430824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=C9F00_RS24925;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_432430824.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000137.1 1 30534
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000137.1	RefSeq	region	1	30534	.	+	.	ID=NZ_PYKC01000137.1:1..30534;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000137.1	RefSeq	gene	225	737	.	-	.	ID=gene-C9F00_RS20500;Name=C9F00_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20500;old_locus_tag=C9F00_20970
NZ_PYKC01000137.1	Protein Homology	CDS	225	737	.	-	0	ID=cds-WP_001195556.1;Parent=gene-C9F00_RS20500;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9F00_RS20500;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	755	2317	.	-	.	ID=gene-C9F00_RS20505;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9F00_RS20505;old_locus_tag=C9F00_20975
NZ_PYKC01000137.1	Protein Homology	CDS	755	2317	.	-	0	ID=cds-WP_000801496.1;Parent=gene-C9F00_RS20505;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9F00_RS20505;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	2535	2975	.	-	.	ID=gene-C9F00_RS20510;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9F00_RS20510;old_locus_tag=C9F00_20980
NZ_PYKC01000137.1	Protein Homology	CDS	2535	2975	.	-	0	ID=cds-WP_000543922.1;Parent=gene-C9F00_RS20510;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9F00_RS20510;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	3250	4539	.	+	.	ID=gene-C9F00_RS20515;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9F00_RS20515;old_locus_tag=C9F00_20985
NZ_PYKC01000137.1	Protein Homology	CDS	3250	4539	.	+	0	ID=cds-WP_135369070.1;Parent=gene-C9F00_RS20515;Dbxref=GenBank:WP_135369070.1;Name=WP_135369070.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9F00_RS20515;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_135369070.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	4536	6002	.	+	.	ID=gene-C9F00_RS20520;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9F00_RS20520;old_locus_tag=C9F00_20990
NZ_PYKC01000137.1	Protein Homology	CDS	4536	6002	.	+	0	ID=cds-WP_000723524.1;Parent=gene-C9F00_RS20520;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9F00_RS20520;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	6004	6855	.	+	.	ID=gene-C9F00_RS20525;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9F00_RS20525;old_locus_tag=C9F00_20995
NZ_PYKC01000137.1	Protein Homology	CDS	6004	6855	.	+	0	ID=cds-WP_000516978.1;Parent=gene-C9F00_RS20525;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9F00_RS20525;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	6865	7245	.	+	.	ID=gene-C9F00_RS20530;Name=C9F00_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20530;old_locus_tag=C9F00_21000
NZ_PYKC01000137.1	Protein Homology	CDS	6865	7245	.	+	0	ID=cds-WP_001119857.1;Parent=gene-C9F00_RS20530;Dbxref=GenBank:WP_001119857.1;Name=WP_001119857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9F00_RS20530;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119857.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	7389	8192	.	+	.	ID=gene-C9F00_RS20540;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9F00_RS20540;old_locus_tag=C9F00_21010
NZ_PYKC01000137.1	Protein Homology	CDS	7389	8192	.	+	0	ID=cds-WP_000884795.1;Parent=gene-C9F00_RS20540;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9F00_RS20540;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	8203	8994	.	+	.	ID=gene-C9F00_RS20545;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9F00_RS20545;old_locus_tag=C9F00_21015
NZ_PYKC01000137.1	Protein Homology	CDS	8203	8994	.	+	0	ID=cds-WP_000785061.1;Parent=gene-C9F00_RS20545;Dbxref=GenBank:WP_000785061.1;Name=WP_000785061.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9F00_RS20545;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785061.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	9066	10442	.	+	.	ID=gene-C9F00_RS20550;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9F00_RS20550;old_locus_tag=C9F00_21020
NZ_PYKC01000137.1	Protein Homology	CDS	9066	10442	.	+	0	ID=cds-WP_135369071.1;Parent=gene-C9F00_RS20550;Dbxref=GenBank:WP_135369071.1;Name=WP_135369071.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9F00_RS20550;product=4-hydroxyphenylacetate permease;protein_id=WP_135369071.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	10452	11348	.	+	.	ID=gene-C9F00_RS20555;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9F00_RS20555;old_locus_tag=C9F00_21025
NZ_PYKC01000137.1	Protein Homology	CDS	10452	11348	.	+	0	ID=cds-WP_135492484.1;Parent=gene-C9F00_RS20555;Dbxref=GenBank:WP_135492484.1;Name=WP_135492484.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9F00_RS20555;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_135492484.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	11362	12300	.	+	.	ID=gene-C9F00_RS20560;Name=C9F00_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20560;old_locus_tag=C9F00_21030
NZ_PYKC01000137.1	Protein Homology	CDS	11362	12300	.	+	0	ID=cds-WP_135369072.1;Parent=gene-C9F00_RS20560;Dbxref=GenBank:WP_135369072.1;Name=WP_135369072.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9F00_RS20560;product=MBL fold metallo-hydrolase;protein_id=WP_135369072.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	12708	13070	.	-	.	ID=gene-C9F00_RS20565;Name=C9F00_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20565;old_locus_tag=C9F00_21035
NZ_PYKC01000137.1	Protein Homology	CDS	12708	13070	.	-	0	ID=cds-WP_001537781.1;Parent=gene-C9F00_RS20565;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9F00_RS20565;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	13724	14029	.	-	.	ID=gene-C9F00_RS20575;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9F00_RS20575;old_locus_tag=C9F00_21045
NZ_PYKC01000137.1	Protein Homology	CDS	13724	14029	.	-	0	ID=cds-WP_001284251.1;Parent=gene-C9F00_RS20575;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=C9F00_RS20575;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	14029	14949	.	-	.	ID=gene-C9F00_RS20580;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9F00_RS20580;old_locus_tag=C9F00_21050
NZ_PYKC01000137.1	Protein Homology	CDS	14029	14949	.	-	0	ID=cds-WP_000420603.1;Parent=gene-C9F00_RS20580;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9F00_RS20580;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	15185	15547	.	+	.	ID=gene-C9F00_RS20585;Name=C9F00_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20585;old_locus_tag=C9F00_21060
NZ_PYKC01000137.1	Protein Homology	CDS	15185	15547	.	+	0	ID=cds-WP_001118902.1;Parent=gene-C9F00_RS20585;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9F00_RS20585;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	15596	17482	.	+	.	ID=gene-C9F00_RS20590;Name=C9F00_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20590;old_locus_tag=C9F00_21065
NZ_PYKC01000137.1	Protein Homology	CDS	15596	17482	.	+	0	ID=cds-WP_135420320.1;Parent=gene-C9F00_RS20590;Dbxref=GenBank:WP_135420320.1;Name=WP_135420320.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9F00_RS20590;product=protein-disulfide reductase DsbD family protein;protein_id=WP_135420320.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	17479	18102	.	+	.	ID=gene-C9F00_RS20595;Name=C9F00_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20595;old_locus_tag=C9F00_21070
NZ_PYKC01000137.1	Protein Homology	CDS	17479	18102	.	+	0	ID=cds-WP_000876690.1;Parent=gene-C9F00_RS20595;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9F00_RS20595;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	18092	18598	.	+	.	ID=gene-C9F00_RS20600;Name=C9F00_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20600;old_locus_tag=C9F00_21075
NZ_PYKC01000137.1	Protein Homology	CDS	18092	18598	.	+	0	ID=cds-WP_135369385.1;Parent=gene-C9F00_RS20600;Dbxref=GenBank:WP_135369385.1;Name=WP_135369385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9F00_RS20600;product=protein disulfide oxidoreductase;protein_id=WP_135369385.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	18731	19972	.	+	.	ID=gene-C9F00_RS20605;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9F00_RS20605;old_locus_tag=C9F00_21080
NZ_PYKC01000137.1	Protein Homology	CDS	18731	19972	.	+	0	ID=cds-WP_135369384.1;Parent=gene-C9F00_RS20605;Dbxref=GenBank:WP_135369384.1;Name=WP_135369384.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9F00_RS20605;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_135369384.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	20006	20233	.	-	.	ID=gene-C9F00_RS20610;Name=C9F00_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20610;old_locus_tag=C9F00_21085
NZ_PYKC01000137.1	Protein Homology	CDS	20006	20233	.	-	0	ID=cds-WP_001143125.1;Parent=gene-C9F00_RS20610;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9F00_RS20610;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	20254	20850	.	-	.	ID=gene-C9F00_RS20615;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9F00_RS20615;old_locus_tag=C9F00_21090
NZ_PYKC01000137.1	Protein Homology	CDS	20254	20850	.	-	0	ID=cds-WP_001062898.1;Parent=gene-C9F00_RS20615;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9F00_RS20615;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	21235	21402	.	+	.	ID=gene-C9F00_RS20620;Name=C9F00_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20620;old_locus_tag=C9F00_21095
NZ_PYKC01000137.1	Protein Homology	CDS	21235	21402	.	+	0	ID=cds-WP_001273663.1;Parent=gene-C9F00_RS20620;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9F00_RS20620;product=general stress protein;protein_id=WP_001273663.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	21539	22177	.	+	.	ID=gene-C9F00_RS20625;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9F00_RS20625;old_locus_tag=C9F00_21100
NZ_PYKC01000137.1	Protein Homology	CDS	21539	22177	.	+	0	ID=cds-WP_000083128.1;Parent=gene-C9F00_RS20625;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9F00_RS20625;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	22174	22569	.	-	.	ID=gene-C9F00_RS20630;Name=C9F00_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20630;old_locus_tag=C9F00_21105
NZ_PYKC01000137.1	Protein Homology	CDS	22174	22569	.	-	0	ID=cds-WP_000821059.1;Parent=gene-C9F00_RS20630;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=C9F00_RS20630;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	22628	26590	.	-	.	ID=gene-C9F00_RS20635;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9F00_RS20635;old_locus_tag=C9F00_21110
NZ_PYKC01000137.1	Protein Homology	CDS	22628	26590	.	-	0	ID=cds-WP_020438024.1;Parent=gene-C9F00_RS20635;Dbxref=GenBank:WP_020438024.1;Name=WP_020438024.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9F00_RS20635;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_020438024.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	27012	28520	.	+	.	ID=gene-C9F00_RS20640;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9F00_RS20640;old_locus_tag=C9F00_21115
NZ_PYKC01000137.1	Protein Homology	CDS	27012	28520	.	+	0	ID=cds-WP_001018467.1;Parent=gene-C9F00_RS20640;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9F00_RS20640;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11
NZ_PYKC01000137.1	RefSeq	gene	29413	30201	.	+	.	ID=gene-C9F00_RS20645;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9F00_RS20645;old_locus_tag=C9F00_21125
NZ_PYKC01000137.1	Protein Homology	CDS	29413	30201	.	+	0	ID=cds-WP_000533526.1;Parent=gene-C9F00_RS20645;Dbxref=GenBank:WP_000533526.1;Name=WP_000533526.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533526.1;locus_tag=C9F00_RS20645;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533526.1;transl_table=11
##sequence-region NZ_PYKC01000019.1 1 30104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000019.1	RefSeq	region	1	30104	.	+	.	ID=NZ_PYKC01000019.1:1..30104;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000019.1	RefSeq	gene	1	516	.	-	.	ID=gene-C9F00_RS03895;Name=C9F00_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03895;old_locus_tag=C9F00_03940;partial=true;start_range=.,1
NZ_PYKC01000019.1	Protein Homology	CDS	1	516	.	-	0	ID=cds-WP_167850711.1;Parent=gene-C9F00_RS03895;Dbxref=GenBank:WP_167850711.1;Name=WP_167850711.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=C9F00_RS03895;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_167850711.1;start_range=.,1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	946	2466	.	+	.	ID=gene-C9F00_RS03900;Name=C9F00_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03900;old_locus_tag=C9F00_03950
NZ_PYKC01000019.1	Protein Homology	CDS	946	2466	.	+	0	ID=cds-WP_000094645.1;Parent=gene-C9F00_RS03900;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9F00_RS03900;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	2854	4419	.	+	.	ID=gene-C9F00_RS03905;Name=C9F00_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03905;old_locus_tag=C9F00_03955
NZ_PYKC01000019.1	Protein Homology	CDS	2854	4419	.	+	0	ID=cds-WP_000478471.1;Parent=gene-C9F00_RS03905;Dbxref=GenBank:WP_000478471.1;Name=WP_000478471.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9F00_RS03905;product=methyl-accepting chemotaxis protein;protein_id=WP_000478471.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	4416	5084	.	-	.	ID=gene-C9F00_RS03910;Name=C9F00_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03910;old_locus_tag=C9F00_03960
NZ_PYKC01000019.1	Protein Homology	CDS	4416	5084	.	-	0	ID=cds-WP_135369275.1;Parent=gene-C9F00_RS03910;Dbxref=GenBank:WP_135369275.1;Name=WP_135369275.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9F00_RS03910;product=PadR family transcriptional regulator;protein_id=WP_135369275.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	5316	6083	.	+	.	ID=gene-C9F00_RS03915;Name=C9F00_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03915;old_locus_tag=C9F00_03965
NZ_PYKC01000019.1	Protein Homology	CDS	5316	6083	.	+	0	ID=cds-WP_135369405.1;Parent=gene-C9F00_RS03915;Dbxref=GenBank:WP_135369405.1;Name=WP_135369405.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9F00_RS03915;product=siderophore-interacting protein;protein_id=WP_135369405.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	6163	6238	.	-	.	ID=gene-C9F00_RS03920;Name=C9F00_RS03920;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS03920;old_locus_tag=C9F00_03970
NZ_PYKC01000019.1	tRNAscan-SE	tRNA	6163	6238	.	-	.	ID=rna-C9F00_RS03920;Parent=gene-C9F00_RS03920;anticodon=(pos:complement(6203..6205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03920;product=tRNA-Ile
NZ_PYKC01000019.1	tRNAscan-SE	exon	6163	6238	.	-	.	ID=exon-C9F00_RS03920-1;Parent=rna-C9F00_RS03920;anticodon=(pos:complement(6203..6205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS03920;product=tRNA-Ile
NZ_PYKC01000019.1	RefSeq	gene	6364	6870	.	+	.	ID=gene-C9F00_RS03925;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9F00_RS03925;old_locus_tag=C9F00_03975
NZ_PYKC01000019.1	Protein Homology	CDS	6364	6870	.	+	0	ID=cds-WP_000237776.1;Parent=gene-C9F00_RS03925;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9F00_RS03925;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	6994	8976	.	-	.	ID=gene-C9F00_RS03930;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9F00_RS03930;old_locus_tag=C9F00_03980
NZ_PYKC01000019.1	Protein Homology	CDS	6994	8976	.	-	0	ID=cds-WP_001120159.1;Parent=gene-C9F00_RS03930;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9F00_RS03930;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	8991	10736	.	-	.	ID=gene-C9F00_RS03935;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9F00_RS03935;old_locus_tag=C9F00_03985
NZ_PYKC01000019.1	Protein Homology	CDS	8991	10736	.	-	0	ID=cds-WP_000918865.1;Parent=gene-C9F00_RS03935;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9F00_RS03935;product=DNA primase;protein_id=WP_000918865.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	10972	11187	.	-	.	ID=gene-C9F00_RS03940;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9F00_RS03940;old_locus_tag=C9F00_03990
NZ_PYKC01000019.1	Protein Homology	CDS	10972	11187	.	-	0	ID=cds-WP_001144069.1;Parent=gene-C9F00_RS03940;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9F00_RS03940;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	11415	12428	.	+	.	ID=gene-C9F00_RS03945;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9F00_RS03945;old_locus_tag=C9F00_03995
NZ_PYKC01000019.1	Protein Homology	CDS	11415	12428	.	+	0	ID=cds-WP_001264389.1;Parent=gene-C9F00_RS03945;Dbxref=GenBank:WP_001264389.1;Name=WP_001264389.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9F00_RS03945;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264389.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	pseudogene	12551	12694	.	-	.	ID=gene-C9F00_RS24055;Name=C9F00_RS24055;end_range=12694,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24055;partial=true;pseudo=true;start_range=.,12551
NZ_PYKC01000019.1	Protein Homology	CDS	12551	12694	.	-	0	ID=cds-C9F00_RS24055;Parent=gene-C9F00_RS24055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=12694,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9F00_RS24055;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,12551;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	12678	13289	.	-	.	ID=gene-C9F00_RS03955;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9F00_RS03955;old_locus_tag=C9F00_04005
NZ_PYKC01000019.1	Protein Homology	CDS	12678	13289	.	-	0	ID=cds-WP_001272784.1;Parent=gene-C9F00_RS03955;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9F00_RS03955;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	13396	13755	.	+	.	ID=gene-C9F00_RS03960;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9F00_RS03960;old_locus_tag=C9F00_04010
NZ_PYKC01000019.1	Protein Homology	CDS	13396	13755	.	+	0	ID=cds-WP_023195111.1;Parent=gene-C9F00_RS03960;Dbxref=GenBank:WP_023195111.1;Name=WP_023195111.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=C9F00_RS03960;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_023195111.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	13853	14674	.	+	.	ID=gene-C9F00_RS03965;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9F00_RS03965;old_locus_tag=C9F00_04015
NZ_PYKC01000019.1	Protein Homology	CDS	13853	14674	.	+	0	ID=cds-WP_001281933.1;Parent=gene-C9F00_RS03965;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9F00_RS03965;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	pseudogene	14673	14757	.	-	.	ID=gene-C9F00_RS24775;Name=C9F00_RS24775;end_range=14757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24775;partial=true;pseudo=true;start_range=.,14673
NZ_PYKC01000019.1	Protein Homology	CDS	14673	14757	.	-	0	ID=cds-C9F00_RS24775;Parent=gene-C9F00_RS24775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=14757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F00_RS24775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,14673;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	14778	16019	.	-	.	ID=gene-C9F00_RS03970;Name=C9F00_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03970;old_locus_tag=C9F00_04020
NZ_PYKC01000019.1	Protein Homology	CDS	14778	16019	.	-	0	ID=cds-WP_000708447.1;Parent=gene-C9F00_RS03970;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9F00_RS03970;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	16082	16696	.	-	.	ID=gene-C9F00_RS03975;Name=C9F00_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03975;old_locus_tag=C9F00_04025
NZ_PYKC01000019.1	Protein Homology	CDS	16082	16696	.	-	0	ID=cds-WP_001125344.1;Parent=gene-C9F00_RS03975;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9F00_RS03975;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	16938	18239	.	+	.	ID=gene-C9F00_RS03980;Name=C9F00_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS03980;old_locus_tag=C9F00_04035
NZ_PYKC01000019.1	Protein Homology	CDS	16938	18239	.	+	0	ID=cds-WP_000046211.1;Parent=gene-C9F00_RS03980;Dbxref=GenBank:WP_000046211.1;Name=WP_000046211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9F00_RS03980;product=inorganic triphosphatase;protein_id=WP_000046211.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	18357	21200	.	+	.	ID=gene-C9F00_RS03985;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9F00_RS03985;old_locus_tag=C9F00_04040
NZ_PYKC01000019.1	Protein Homology	CDS	18357	21200	.	+	0	ID=cds-WP_135369368.1;Parent=gene-C9F00_RS03985;Dbxref=GenBank:WP_135369368.1;Name=WP_135369368.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9F00_RS03985;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_135369368.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	21248	22681	.	+	.	ID=gene-C9F00_RS03990;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9F00_RS03990;old_locus_tag=C9F00_04045
NZ_PYKC01000019.1	Protein Homology	CDS	21248	22681	.	+	0	ID=cds-WP_000867680.1;Parent=gene-C9F00_RS03990;Dbxref=GenBank:WP_000867680.1;Name=WP_000867680.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9F00_RS03990;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867680.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	22841	22900	.	-	.	ID=gene-C9F00_RS24185;Name=C9F00_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24185
NZ_PYKC01000019.1	Protein Homology	CDS	22841	22900	.	-	0	ID=cds-WP_001804776.1;Parent=gene-C9F00_RS24185;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9F00_RS24185;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	23140	24819	.	-	.	ID=gene-C9F00_RS04000;Name=C9F00_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04000;old_locus_tag=C9F00_04055
NZ_PYKC01000019.1	Protein Homology	CDS	23140	24819	.	-	0	ID=cds-WP_135369369.1;Parent=gene-C9F00_RS04000;Dbxref=GenBank:WP_135369369.1;Name=WP_135369369.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F00_RS04000;product=flotillin family protein;protein_id=WP_135369369.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	24838	25458	.	-	.	ID=gene-C9F00_RS04005;Name=C9F00_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04005;old_locus_tag=C9F00_04060
NZ_PYKC01000019.1	Protein Homology	CDS	24838	25458	.	-	0	ID=cds-WP_000171739.1;Parent=gene-C9F00_RS04005;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9F00_RS04005;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	25716	25925	.	+	.	ID=gene-C9F00_RS04010;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9F00_RS04010;old_locus_tag=C9F00_04065
NZ_PYKC01000019.1	Protein Homology	CDS	25716	25925	.	+	0	ID=cds-WP_000928927.1;Parent=gene-C9F00_RS04010;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9F00_RS04010;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	26000	26296	.	-	.	ID=gene-C9F00_RS04015;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=C9F00_RS04015;old_locus_tag=C9F00_04070
NZ_PYKC01000019.1	Protein Homology	CDS	26000	26296	.	-	0	ID=cds-WP_000566824.1;Parent=gene-C9F00_RS04015;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=C9F00_RS04015;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11
NZ_PYKC01000019.1	cmsearch	riboswitch	26429	26627	.	+	.	ID=id-NZ_PYKC01000019.1:26429..26627;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000019.1	RefSeq	gene	26733	27386	.	+	.	ID=gene-C9F00_RS04020;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9F00_RS04020;old_locus_tag=C9F00_04075
NZ_PYKC01000019.1	Protein Homology	CDS	26733	27386	.	+	0	ID=cds-WP_001076978.1;Parent=gene-C9F00_RS04020;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9F00_RS04020;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	27557	28234	.	-	.	ID=gene-C9F00_RS04025;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9F00_RS04025;old_locus_tag=C9F00_04080
NZ_PYKC01000019.1	Protein Homology	CDS	27557	28234	.	-	0	ID=cds-WP_000345576.1;Parent=gene-C9F00_RS04025;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9F00_RS04025;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	28249	28920	.	-	.	ID=gene-C9F00_RS04030;Name=C9F00_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04030;old_locus_tag=C9F00_04085
NZ_PYKC01000019.1	Protein Homology	CDS	28249	28920	.	-	0	ID=cds-WP_000096230.1;Parent=gene-C9F00_RS04030;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9F00_RS04030;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11
NZ_PYKC01000019.1	RefSeq	gene	28940	30104	.	-	.	ID=gene-C9F00_RS04035;Name=C9F00_RS04035;end_range=30104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04035;old_locus_tag=C9F00_04090;partial=true
NZ_PYKC01000019.1	Protein Homology	CDS	28940	30104	.	-	1	ID=cds-WP_210114158.1;Parent=gene-C9F00_RS04035;Dbxref=GenBank:WP_210114158.1;Name=WP_210114158.1;Ontology_term=GO:0004062;end_range=30104,.;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954510.1;locus_tag=C9F00_RS04035;partial=true;product=aryl-sulfate sulfotransferase;protein_id=WP_210114158.1;transl_table=11
##sequence-region NZ_PYKC01000011.1 1 28882
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000011.1	RefSeq	region	1	28882	.	+	.	ID=NZ_PYKC01000011.1:1..28882;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000011.1	RefSeq	gene	1	1155	.	-	.	ID=gene-C9F00_RS02675;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9F00_RS02675;old_locus_tag=C9F00_02720;partial=true;start_range=.,1
NZ_PYKC01000011.1	Protein Homology	CDS	1	1155	.	-	0	ID=cds-WP_135492106.1;Parent=gene-C9F00_RS02675;Dbxref=GenBank:WP_135492106.1;Name=WP_135492106.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9F00_RS02675;partial=true;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_135492106.1;start_range=.,1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	1170	2618	.	-	.	ID=gene-C9F00_RS02680;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9F00_RS02680;old_locus_tag=C9F00_02725
NZ_PYKC01000011.1	Protein Homology	CDS	1170	2618	.	-	0	ID=cds-WP_135369231.1;Parent=gene-C9F00_RS02680;Dbxref=GenBank:WP_135369231.1;Name=WP_135369231.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9F00_RS02680;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135369231.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	2640	3908	.	-	.	ID=gene-C9F00_RS02685;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9F00_RS02685;old_locus_tag=C9F00_02730
NZ_PYKC01000011.1	Protein Homology	CDS	2640	3908	.	-	0	ID=cds-WP_135369232.1;Parent=gene-C9F00_RS02685;Dbxref=GenBank:WP_135369232.1;Name=WP_135369232.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9F00_RS02685;product=L-2-hydroxyglutarate oxidase;protein_id=WP_135369232.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	3934	4911	.	-	.	ID=gene-C9F00_RS02690;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9F00_RS02690;old_locus_tag=C9F00_02735
NZ_PYKC01000011.1	Protein Homology	CDS	3934	4911	.	-	0	ID=cds-WP_000993100.1;Parent=gene-C9F00_RS02690;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9F00_RS02690;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	5215	6729	.	-	.	ID=gene-C9F00_RS02695;Name=C9F00_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02695;old_locus_tag=C9F00_02740
NZ_PYKC01000011.1	Protein Homology	CDS	5215	6729	.	-	0	ID=cds-WP_000382035.1;Parent=gene-C9F00_RS02695;Dbxref=GenBank:WP_000382035.1;Name=WP_000382035.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9F00_RS02695;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	6740	7174	.	-	.	ID=gene-C9F00_RS02700;Name=C9F00_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02700;old_locus_tag=C9F00_02745
NZ_PYKC01000011.1	Protein Homology	CDS	6740	7174	.	-	0	ID=cds-WP_001574835.1;Parent=gene-C9F00_RS02700;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9F00_RS02700;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	7186	8163	.	-	.	ID=gene-C9F00_RS02705;Name=C9F00_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02705;old_locus_tag=C9F00_02750
NZ_PYKC01000011.1	Protein Homology	CDS	7186	8163	.	-	0	ID=cds-WP_135492108.1;Parent=gene-C9F00_RS02705;Dbxref=GenBank:WP_135492108.1;Name=WP_135492108.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F00_RS02705;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_135492108.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	8318	8992	.	+	.	ID=gene-C9F00_RS02710;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9F00_RS02710;old_locus_tag=C9F00_02755
NZ_PYKC01000011.1	Protein Homology	CDS	8318	8992	.	+	0	ID=cds-WP_001237934.1;Parent=gene-C9F00_RS02710;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9F00_RS02710;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	8979	10394	.	+	.	ID=gene-C9F00_RS02715;Name=C9F00_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02715;old_locus_tag=C9F00_02760
NZ_PYKC01000011.1	Protein Homology	CDS	8979	10394	.	+	0	ID=cds-WP_000872348.1;Parent=gene-C9F00_RS02715;Dbxref=GenBank:WP_000872348.1;Name=WP_000872348.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9F00_RS02715;product=sensor histidine kinase;protein_id=WP_000872348.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	10527	11540	.	+	.	ID=gene-C9F00_RS02720;Name=C9F00_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02720;old_locus_tag=C9F00_02765
NZ_PYKC01000011.1	Protein Homology	CDS	10527	11540	.	+	0	ID=cds-WP_135369233.1;Parent=gene-C9F00_RS02720;Dbxref=GenBank:WP_135369233.1;Name=WP_135369233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9F00_RS02720;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_135369233.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	12262	13158	.	-	.	ID=gene-C9F00_RS02725;Name=C9F00_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02725;old_locus_tag=C9F00_02770
NZ_PYKC01000011.1	Protein Homology	CDS	12262	13158	.	-	0	ID=cds-WP_039589419.1;Parent=gene-C9F00_RS02725;Dbxref=GenBank:WP_039589419.1;Name=WP_039589419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9F00_RS02725;product=antimicrobial resistance protein Mig-14;protein_id=WP_039589419.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	13452	14381	.	-	.	ID=gene-C9F00_RS02735;Name=C9F00_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02735;old_locus_tag=C9F00_02780
NZ_PYKC01000011.1	Protein Homology	CDS	13452	14381	.	-	0	ID=cds-WP_031605029.1;Parent=gene-C9F00_RS02735;Dbxref=GenBank:WP_031605029.1;Name=WP_031605029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9F00_RS02735;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_031605029.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	14900	15952	.	+	.	ID=gene-C9F00_RS02740;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9F00_RS02740;old_locus_tag=C9F00_02785
NZ_PYKC01000011.1	Protein Homology	CDS	14900	15952	.	+	0	ID=cds-WP_031605027.1;Parent=gene-C9F00_RS02740;Dbxref=GenBank:WP_031605027.1;Name=WP_031605027.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9F00_RS02740;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_031605027.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	16127	16459	.	+	.	ID=gene-C9F00_RS02745;Name=C9F00_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02745;old_locus_tag=C9F00_02790
NZ_PYKC01000011.1	Protein Homology	CDS	16127	16459	.	+	0	ID=cds-WP_077942173.1;Parent=gene-C9F00_RS02745;Dbxref=GenBank:WP_077942173.1;Name=WP_077942173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9F00_RS02745;product=hypothetical protein;protein_id=WP_077942173.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	16979	19153	.	+	.	ID=gene-C9F00_RS02755;Name=C9F00_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02755;old_locus_tag=C9F00_02800
NZ_PYKC01000011.1	Protein Homology	CDS	16979	19153	.	+	0	ID=cds-WP_276606050.1;Parent=gene-C9F00_RS02755;Dbxref=GenBank:WP_276606050.1;Name=WP_276606050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=C9F00_RS02755;product=TonB-dependent siderophore receptor;protein_id=WP_276606050.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	19195	20130	.	-	.	ID=gene-C9F00_RS02760;Name=C9F00_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02760;old_locus_tag=C9F00_02805
NZ_PYKC01000011.1	Protein Homology	CDS	19195	20130	.	-	0	ID=cds-WP_135369252.1;Parent=gene-C9F00_RS02760;Dbxref=GenBank:WP_135369252.1;Name=WP_135369252.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9F00_RS02760;product=alpha/beta hydrolase;protein_id=WP_135369252.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	20162	21406	.	-	.	ID=gene-C9F00_RS02765;Name=C9F00_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02765;old_locus_tag=C9F00_02810
NZ_PYKC01000011.1	Protein Homology	CDS	20162	21406	.	-	0	ID=cds-WP_135369253.1;Parent=gene-C9F00_RS02765;Dbxref=GenBank:WP_135369253.1;Name=WP_135369253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9F00_RS02765;product=esterase family protein;protein_id=WP_135369253.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	21516	25172	.	-	.	ID=gene-C9F00_RS02770;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=C9F00_RS02770;old_locus_tag=C9F00_02815
NZ_PYKC01000011.1	Protein Homology	CDS	21516	25172	.	-	0	ID=cds-WP_135369254.1;Parent=gene-C9F00_RS02770;Dbxref=GenBank:WP_135369254.1;Name=WP_135369254.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9F00_RS02770;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_135369254.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	25253	26368	.	-	.	ID=gene-C9F00_RS02775;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9F00_RS02775;old_locus_tag=C9F00_02820
NZ_PYKC01000011.1	Protein Homology	CDS	25253	26368	.	-	0	ID=cds-WP_023260020.1;Parent=gene-C9F00_RS02775;Dbxref=GenBank:WP_023260020.1;Name=WP_023260020.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9F00_RS02775;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_023260020.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	27296	27523	.	+	.	ID=gene-C9F00_RS02790;Name=C9F00_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02790;old_locus_tag=C9F00_02835
NZ_PYKC01000011.1	Protein Homology	CDS	27296	27523	.	+	0	ID=cds-WP_001537512.1;Parent=gene-C9F00_RS02790;Dbxref=GenBank:WP_001537512.1;Name=WP_001537512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=C9F00_RS02790;product=DUF1272 domain-containing protein;protein_id=WP_001537512.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	27837	28664	.	+	.	ID=gene-C9F00_RS02795;Name=C9F00_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02795;old_locus_tag=C9F00_02840
NZ_PYKC01000011.1	Protein Homology	CDS	27837	28664	.	+	0	ID=cds-WP_135369256.1;Parent=gene-C9F00_RS02795;Dbxref=GenBank:WP_135369256.1;Name=WP_135369256.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.6;locus_tag=C9F00_RS02795;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_135369256.1;transl_table=11
NZ_PYKC01000011.1	RefSeq	gene	28672	28882	.	-	.	ID=gene-C9F00_RS02800;Name=C9F00_RS02800;end_range=28882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS02800;old_locus_tag=C9F00_02845;partial=true
NZ_PYKC01000011.1	Protein Homology	CDS	28672	28882	.	-	1	ID=cds-WP_135492110.1;Parent=gene-C9F00_RS02800;Dbxref=GenBank:WP_135492110.1;Name=WP_135492110.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;end_range=28882,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F00_RS02800;partial=true;product=integrase core domain-containing protein;protein_id=WP_135492110.1;transl_table=11
##sequence-region NZ_PYKC01000086.1 1 28641
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000086.1	RefSeq	region	1	28641	.	+	.	ID=NZ_PYKC01000086.1:1..28641;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000086.1	RefSeq	gene	1	1163	.	-	.	ID=gene-C9F00_RS14055;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9F00_RS14055;old_locus_tag=C9F00_14390;partial=true;start_range=.,1
NZ_PYKC01000086.1	Protein Homology	CDS	1	1163	.	-	0	ID=cds-WP_079848244.1;Parent=gene-C9F00_RS14055;Dbxref=GenBank:WP_079848244.1;Name=WP_079848244.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F00_RS14055;partial=true;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_079848244.1;start_range=.,1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	1335	2000	.	+	.	ID=gene-C9F00_RS14060;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9F00_RS14060;old_locus_tag=C9F00_14395
NZ_PYKC01000086.1	Protein Homology	CDS	1335	2000	.	+	0	ID=cds-WP_001249412.1;Parent=gene-C9F00_RS14060;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9F00_RS14060;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	1997	2326	.	+	.	ID=gene-C9F00_RS14065;Name=C9F00_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14065;old_locus_tag=C9F00_14400
NZ_PYKC01000086.1	Protein Homology	CDS	1997	2326	.	+	0	ID=cds-WP_000825956.1;Parent=gene-C9F00_RS14065;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9F00_RS14065;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	2338	2799	.	+	.	ID=gene-C9F00_RS14070;Name=C9F00_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14070;old_locus_tag=C9F00_14405
NZ_PYKC01000086.1	Protein Homology	CDS	2338	2799	.	+	0	ID=cds-WP_000476064.1;Parent=gene-C9F00_RS14070;Dbxref=GenBank:WP_000476064.1;Name=WP_000476064.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9F00_RS14070;product=NUDIX hydrolase;protein_id=WP_000476064.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	2853	3959	.	+	.	ID=gene-C9F00_RS14075;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=C9F00_RS14075;old_locus_tag=C9F00_14410
NZ_PYKC01000086.1	Protein Homology	CDS	2853	3959	.	+	0	ID=cds-WP_135369294.1;Parent=gene-C9F00_RS14075;Dbxref=GenBank:WP_135369294.1;Name=WP_135369294.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9F00_RS14075;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_135369294.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	4046	4687	.	+	.	ID=gene-C9F00_RS14080;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9F00_RS14080;old_locus_tag=C9F00_14415
NZ_PYKC01000086.1	Protein Homology	CDS	4046	4687	.	+	0	ID=cds-WP_001519653.1;Parent=gene-C9F00_RS14080;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9F00_RS14080;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	4691	6061	.	+	.	ID=gene-C9F00_RS14085;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9F00_RS14085;old_locus_tag=C9F00_14420
NZ_PYKC01000086.1	Protein Homology	CDS	4691	6061	.	+	0	ID=cds-WP_000423766.1;Parent=gene-C9F00_RS14085;Dbxref=GenBank:WP_000423766.1;Name=WP_000423766.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9F00_RS14085;product=adenylosuccinate lyase;protein_id=WP_000423766.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	6188	6859	.	+	.	ID=gene-C9F00_RS14090;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9F00_RS14090;old_locus_tag=C9F00_14425
NZ_PYKC01000086.1	Protein Homology	CDS	6188	6859	.	+	0	ID=cds-WP_001537766.1;Parent=gene-C9F00_RS14090;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=C9F00_RS14090;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	6859	8322	.	+	.	ID=gene-C9F00_RS14095;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9F00_RS14095;old_locus_tag=C9F00_14430
NZ_PYKC01000086.1	Protein Homology	CDS	6859	8322	.	+	0	ID=cds-WP_001031687.1;Parent=gene-C9F00_RS14095;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9F00_RS14095;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	8403	9524	.	+	.	ID=gene-C9F00_RS14100;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9F00_RS14100;old_locus_tag=C9F00_14435
NZ_PYKC01000086.1	Protein Homology	CDS	8403	9524	.	+	0	ID=cds-WP_000456527.1;Parent=gene-C9F00_RS14100;Dbxref=GenBank:WP_000456527.1;Name=WP_000456527.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9F00_RS14100;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456527.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	9564	10898	.	-	.	ID=gene-C9F00_RS14105;Name=C9F00_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14105;old_locus_tag=C9F00_14440
NZ_PYKC01000086.1	Protein Homology	CDS	9564	10898	.	-	0	ID=cds-WP_135369293.1;Parent=gene-C9F00_RS14105;Dbxref=GenBank:WP_135369293.1;Name=WP_135369293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9F00_RS14105;product=hypothetical protein;protein_id=WP_135369293.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	10902	12131	.	-	.	ID=gene-C9F00_RS14110;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9F00_RS14110;old_locus_tag=C9F00_14445
NZ_PYKC01000086.1	Protein Homology	CDS	10902	12131	.	-	0	ID=cds-WP_135492352.1;Parent=gene-C9F00_RS14110;Dbxref=GenBank:WP_135492352.1;Name=WP_135492352.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9F00_RS14110;product=peptidase T;protein_id=WP_135492352.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	12382	13518	.	+	.	ID=gene-C9F00_RS14115;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9F00_RS14115;old_locus_tag=C9F00_14450
NZ_PYKC01000086.1	Protein Homology	CDS	12382	13518	.	+	0	ID=cds-WP_000531607.1;Parent=gene-C9F00_RS14115;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9F00_RS14115;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	13502	14365	.	+	.	ID=gene-C9F00_RS14120;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9F00_RS14120;old_locus_tag=C9F00_14455
NZ_PYKC01000086.1	Protein Homology	CDS	13502	14365	.	+	0	ID=cds-WP_000799391.1;Parent=gene-C9F00_RS14120;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9F00_RS14120;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	14694	15704	.	+	.	ID=gene-C9F00_RS14125;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9F00_RS14125;old_locus_tag=C9F00_14460
NZ_PYKC01000086.1	Protein Homology	CDS	14694	15704	.	+	0	ID=cds-WP_135369292.1;Parent=gene-C9F00_RS14125;Dbxref=GenBank:WP_135369292.1;Name=WP_135369292.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9F00_RS14125;product=SPI-2 type III secretion system effector SifA;protein_id=WP_135369292.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	16020	16799	.	+	.	ID=gene-C9F00_RS14130;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9F00_RS14130;old_locus_tag=C9F00_14465
NZ_PYKC01000086.1	Protein Homology	CDS	16020	16799	.	+	0	ID=cds-WP_000580299.1;Parent=gene-C9F00_RS14130;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9F00_RS14130;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	16824	17870	.	+	.	ID=gene-C9F00_RS14135;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9F00_RS14135;old_locus_tag=C9F00_14470
NZ_PYKC01000086.1	Protein Homology	CDS	16824	17870	.	+	0	ID=cds-WP_000759329.1;Parent=gene-C9F00_RS14135;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9F00_RS14135;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	17952	18773	.	-	.	ID=gene-C9F00_RS14140;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9F00_RS14140;old_locus_tag=C9F00_14475
NZ_PYKC01000086.1	Protein Homology	CDS	17952	18773	.	-	0	ID=cds-WP_135492354.1;Parent=gene-C9F00_RS14140;Dbxref=GenBank:WP_135492354.1;Name=WP_135492354.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F00_RS14140;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_135492354.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	18792	19703	.	-	.	ID=gene-C9F00_RS14145;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9F00_RS14145;old_locus_tag=C9F00_14480
NZ_PYKC01000086.1	Protein Homology	CDS	18792	19703	.	-	0	ID=cds-WP_000291338.1;Parent=gene-C9F00_RS14145;Dbxref=GenBank:WP_000291338.1;Name=WP_000291338.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9F00_RS14145;product=N-acetylglucosamine kinase;protein_id=WP_000291338.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	19732	20976	.	-	.	ID=gene-C9F00_RS14150;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9F00_RS14150;old_locus_tag=C9F00_14485
NZ_PYKC01000086.1	Protein Homology	CDS	19732	20976	.	-	0	ID=cds-WP_000168091.1;Parent=gene-C9F00_RS14150;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9F00_RS14150;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	20976	21677	.	-	.	ID=gene-C9F00_RS14155;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9F00_RS14155;old_locus_tag=C9F00_14490
NZ_PYKC01000086.1	Protein Homology	CDS	20976	21677	.	-	0	ID=cds-WP_001033714.1;Parent=gene-C9F00_RS14155;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9F00_RS14155;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	21670	22869	.	-	.	ID=gene-C9F00_RS14160;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9F00_RS14160;old_locus_tag=C9F00_14495
NZ_PYKC01000086.1	Protein Homology	CDS	21670	22869	.	-	0	ID=cds-WP_001518787.1;Parent=gene-C9F00_RS14160;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9F00_RS14160;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	23207	26653	.	+	.	ID=gene-C9F00_RS14165;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9F00_RS14165;old_locus_tag=C9F00_14500
NZ_PYKC01000086.1	Protein Homology	CDS	23207	26653	.	+	0	ID=cds-WP_001114323.1;Parent=gene-C9F00_RS14165;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9F00_RS14165;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	26801	27766	.	+	.	ID=gene-C9F00_RS14170;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=C9F00_RS14170;old_locus_tag=C9F00_14505
NZ_PYKC01000086.1	Protein Homology	CDS	26801	27766	.	+	0	ID=cds-WP_000482961.1;Parent=gene-C9F00_RS14170;Dbxref=GenBank:WP_000482961.1;Name=WP_000482961.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9F00_RS14170;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482961.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	gene	27863	28120	.	-	.	ID=gene-C9F00_RS14175;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=C9F00_RS14175;old_locus_tag=C9F00_14510
NZ_PYKC01000086.1	Protein Homology	CDS	27863	28120	.	-	0	ID=cds-WP_000800159.1;Parent=gene-C9F00_RS14175;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9F00_RS14175;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11
NZ_PYKC01000086.1	RefSeq	pseudogene	28362	28619	.	+	.	ID=gene-C9F00_RS14180;Name=C9F00_RS14180;end_range=28619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14180;old_locus_tag=C9F00_14515;partial=true;pseudo=true
NZ_PYKC01000086.1	Protein Homology	CDS	28362	28619	.	+	0	ID=cds-C9F00_RS14180;Parent=gene-C9F00_RS14180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=28619,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=C9F00_RS14180;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000147.1 1 28295
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000147.1	RefSeq	region	1	28295	.	+	.	ID=NZ_PYKC01000147.1:1..28295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000147.1	RefSeq	gene	1	1465	.	-	.	ID=gene-C9F00_RS22110;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9F00_RS22110;old_locus_tag=C9F00_22630;partial=true;start_range=.,1
NZ_PYKC01000147.1	Protein Homology	CDS	1	1465	.	-	0	ID=cds-WP_135492522.1;Parent=gene-C9F00_RS22110;Dbxref=GenBank:WP_135492522.1;Name=WP_135492522.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9F00_RS22110;partial=true;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_135492522.1;start_range=.,1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	1675	1917	.	+	.	ID=gene-C9F00_RS22115;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9F00_RS22115;old_locus_tag=C9F00_22635
NZ_PYKC01000147.1	Protein Homology	CDS	1675	1917	.	+	0	ID=cds-WP_001124944.1;Parent=gene-C9F00_RS22115;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9F00_RS22115;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	1918	2817	.	+	.	ID=gene-C9F00_RS22120;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9F00_RS22120;old_locus_tag=C9F00_22640
NZ_PYKC01000147.1	Protein Homology	CDS	1918	2817	.	+	0	ID=cds-WP_000348074.1;Parent=gene-C9F00_RS22120;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9F00_RS22120;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	2841	4703	.	+	.	ID=gene-C9F00_RS22125;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9F00_RS22125;old_locus_tag=C9F00_22645
NZ_PYKC01000147.1	Protein Homology	CDS	2841	4703	.	+	0	ID=cds-WP_000006777.1;Parent=gene-C9F00_RS22125;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9F00_RS22125;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	4760	5734	.	+	.	ID=gene-C9F00_RS22130;Name=C9F00_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22130;old_locus_tag=C9F00_22650
NZ_PYKC01000147.1	Protein Homology	CDS	4760	5734	.	+	0	ID=cds-WP_001199858.1;Parent=gene-C9F00_RS22130;Dbxref=GenBank:WP_001199858.1;Name=WP_001199858.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9F00_RS22130;product=aldo/keto reductase;protein_id=WP_001199858.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	5838	6353	.	-	.	ID=gene-C9F00_RS22135;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9F00_RS22135;old_locus_tag=C9F00_22655
NZ_PYKC01000147.1	Protein Homology	CDS	5838	6353	.	-	0	ID=cds-WP_000154063.1;Parent=gene-C9F00_RS22135;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9F00_RS22135;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	6331	7311	.	-	.	ID=gene-C9F00_RS22140;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9F00_RS22140;old_locus_tag=C9F00_22660
NZ_PYKC01000147.1	Protein Homology	CDS	6331	7311	.	-	0	ID=cds-WP_135492524.1;Parent=gene-C9F00_RS22140;Dbxref=GenBank:WP_135492524.1;Name=WP_135492524.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9F00_RS22140;product=thiamine-phosphate kinase;protein_id=WP_135492524.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	7390	7809	.	-	.	ID=gene-C9F00_RS22145;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9F00_RS22145;old_locus_tag=C9F00_22665
NZ_PYKC01000147.1	Protein Homology	CDS	7390	7809	.	-	0	ID=cds-WP_000801129.1;Parent=gene-C9F00_RS22145;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9F00_RS22145;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	7830	8300	.	-	.	ID=gene-C9F00_RS22150;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=C9F00_RS22150;old_locus_tag=C9F00_22670
NZ_PYKC01000147.1	Protein Homology	CDS	7830	8300	.	-	0	ID=cds-WP_001021373.1;Parent=gene-C9F00_RS22150;Dbxref=GenBank:WP_001021373.1;Name=WP_001021373.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9F00_RS22150;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021373.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	8389	9492	.	-	.	ID=gene-C9F00_RS22155;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9F00_RS22155;old_locus_tag=C9F00_22675
NZ_PYKC01000147.1	Protein Homology	CDS	8389	9492	.	-	0	ID=cds-WP_001150216.1;Parent=gene-C9F00_RS22155;Dbxref=GenBank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9F00_RS22155;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	9496	9945	.	-	.	ID=gene-C9F00_RS22160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9F00_RS22160;old_locus_tag=C9F00_22680
NZ_PYKC01000147.1	Protein Homology	CDS	9496	9945	.	-	0	ID=cds-WP_000543533.1;Parent=gene-C9F00_RS22160;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9F00_RS22160;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	10097	10636	.	+	.	ID=gene-C9F00_RS22165;Name=C9F00_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22165;old_locus_tag=C9F00_22685
NZ_PYKC01000147.1	Protein Homology	CDS	10097	10636	.	+	0	ID=cds-WP_000198484.1;Parent=gene-C9F00_RS22165;Dbxref=GenBank:WP_000198484.1;Name=WP_000198484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9F00_RS22165;product=DUF3251 domain-containing protein;protein_id=WP_000198484.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	10936	11799	.	+	.	ID=gene-C9F00_RS22170;Name=C9F00_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22170;old_locus_tag=C9F00_22690
NZ_PYKC01000147.1	Protein Homology	CDS	10936	11799	.	+	0	ID=cds-WP_079987331.1;Parent=gene-C9F00_RS22170;Dbxref=GenBank:WP_079987331.1;Name=WP_079987331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9F00_RS22170;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_079987331.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	11883	11990	.	-	.	ID=gene-C9F00_RS24730;Name=C9F00_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24730
NZ_PYKC01000147.1	Protein Homology	CDS	11883	11990	.	-	0	ID=cds-WP_000176312.1;Parent=gene-C9F00_RS24730;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9F00_RS24730;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	12428	12775	.	-	.	ID=gene-C9F00_RS22185;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9F00_RS22185;old_locus_tag=C9F00_22705
NZ_PYKC01000147.1	Protein Homology	CDS	12428	12775	.	-	0	ID=cds-WP_000974818.1;Parent=gene-C9F00_RS22185;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9F00_RS22185;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	12869	13840	.	-	.	ID=gene-C9F00_RS22190;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9F00_RS22190;old_locus_tag=C9F00_22710
NZ_PYKC01000147.1	Protein Homology	CDS	12869	13840	.	-	0	ID=cds-WP_000046629.1;Parent=gene-C9F00_RS22190;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9F00_RS22190;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	13851	15698	.	-	.	ID=gene-C9F00_RS22195;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9F00_RS22195;old_locus_tag=C9F00_22715
NZ_PYKC01000147.1	Protein Homology	CDS	13851	15698	.	-	0	ID=cds-WP_135492526.1;Parent=gene-C9F00_RS22195;Dbxref=GenBank:WP_135492526.1;Name=WP_135492526.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9F00_RS22195;product=protein translocase subunit SecD;protein_id=WP_135492526.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	15726	16058	.	-	.	ID=gene-C9F00_RS22200;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9F00_RS22200;old_locus_tag=C9F00_22720
NZ_PYKC01000147.1	Protein Homology	CDS	15726	16058	.	-	0	ID=cds-WP_000007628.1;Parent=gene-C9F00_RS22200;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F00_RS22200;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	16081	17208	.	-	.	ID=gene-C9F00_RS22205;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9F00_RS22205;old_locus_tag=C9F00_22725
NZ_PYKC01000147.1	Protein Homology	CDS	16081	17208	.	-	0	ID=cds-WP_000667302.1;Parent=gene-C9F00_RS22205;Dbxref=GenBank:WP_000667302.1;Name=WP_000667302.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9F00_RS22205;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667302.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	17405	18469	.	-	.	ID=gene-C9F00_RS22210;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9F00_RS22210;old_locus_tag=C9F00_22735
NZ_PYKC01000147.1	Protein Homology	CDS	17405	18469	.	-	0	ID=cds-WP_001266530.1;Parent=gene-C9F00_RS22210;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9F00_RS22210;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	18563	19144	.	+	.	ID=gene-C9F00_RS22215;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9F00_RS22215;old_locus_tag=C9F00_22740
NZ_PYKC01000147.1	Protein Homology	CDS	18563	19144	.	+	0	ID=cds-WP_001009858.1;Parent=gene-C9F00_RS22215;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9F00_RS22215;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	19354	19956	.	+	.	ID=gene-C9F00_RS22220;Name=C9F00_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22220;old_locus_tag=C9F00_22745
NZ_PYKC01000147.1	Protein Homology	CDS	19354	19956	.	+	0	ID=cds-WP_000244731.1;Parent=gene-C9F00_RS22220;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9F00_RS22220;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	20028	21845	.	-	.	ID=gene-C9F00_RS22225;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=C9F00_RS22225;old_locus_tag=C9F00_22750
NZ_PYKC01000147.1	Protein Homology	CDS	20028	21845	.	-	0	ID=cds-WP_064043206.1;Parent=gene-C9F00_RS22225;Dbxref=GenBank:WP_064043206.1;Name=WP_064043206.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9F00_RS22225;product=maltodextrin glucosidase;protein_id=WP_064043206.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	22007	23377	.	-	.	ID=gene-C9F00_RS22230;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9F00_RS22230;old_locus_tag=C9F00_22755
NZ_PYKC01000147.1	Protein Homology	CDS	22007	23377	.	-	0	ID=cds-WP_001537837.1;Parent=gene-C9F00_RS22230;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9F00_RS22230;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	23452	24771	.	-	.	ID=gene-C9F00_RS22235;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9F00_RS22235;old_locus_tag=C9F00_22760
NZ_PYKC01000147.1	Protein Homology	CDS	23452	24771	.	-	0	ID=cds-WP_000149625.1;Parent=gene-C9F00_RS22235;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9F00_RS22235;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	25180	26475	.	-	.	ID=gene-C9F00_RS22240;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9F00_RS22240;old_locus_tag=C9F00_22765
NZ_PYKC01000147.1	Protein Homology	CDS	25180	26475	.	-	0	ID=cds-WP_135492528.1;Parent=gene-C9F00_RS22240;Dbxref=GenBank:WP_135492528.1;Name=WP_135492528.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9F00_RS22240;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_135492528.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	26545	27234	.	-	.	ID=gene-C9F00_RS22245;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9F00_RS22245;old_locus_tag=C9F00_22770
NZ_PYKC01000147.1	Protein Homology	CDS	26545	27234	.	-	0	ID=cds-WP_000113918.1;Parent=gene-C9F00_RS22245;Dbxref=GenBank:WP_000113918.1;Name=WP_000113918.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9F00_RS22245;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113918.1;transl_table=11
NZ_PYKC01000147.1	RefSeq	gene	27449	28295	.	+	.	ID=gene-C9F00_RS22250;Name=sbcD;end_range=28295,.;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9F00_RS22250;old_locus_tag=C9F00_22775;partial=true
NZ_PYKC01000147.1	Protein Homology	CDS	27449	28295	.	+	0	ID=cds-WP_135492530.1;Parent=gene-C9F00_RS22250;Dbxref=GenBank:WP_135492530.1;Name=WP_135492530.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;end_range=28295,.;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F00_RS22250;partial=true;product=exonuclease subunit SbcD;protein_id=WP_135492530.1;transl_table=11
##sequence-region NZ_PYKC01000085.1 1 28026
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000085.1	RefSeq	region	1	28026	.	+	.	ID=NZ_PYKC01000085.1:1..28026;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000085.1	RefSeq	gene	1	506	.	-	.	ID=gene-C9F00_RS13915;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9F00_RS13915;old_locus_tag=C9F00_14245;partial=true;start_range=.,1
NZ_PYKC01000085.1	Protein Homology	CDS	1	506	.	-	0	ID=cds-WP_135492350.1;Parent=gene-C9F00_RS13915;Dbxref=GenBank:WP_135492350.1;Name=WP_135492350.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9F00_RS13915;partial=true;product=DNA replication terminus site-binding protein;protein_id=WP_135492350.1;start_range=.,1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	582	1883	.	-	.	ID=gene-C9F00_RS13920;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9F00_RS13920;old_locus_tag=C9F00_14250
NZ_PYKC01000085.1	Protein Homology	CDS	582	1883	.	-	0	ID=cds-WP_094897398.1;Parent=gene-C9F00_RS13920;Dbxref=GenBank:WP_094897398.1;Name=WP_094897398.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9F00_RS13920;product=two-component system sensor histidine kinase RstB;protein_id=WP_094897398.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	1994	3700	.	-	.	ID=gene-C9F00_RS13925;Name=C9F00_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13925;old_locus_tag=C9F00_14255
NZ_PYKC01000085.1	Protein Homology	CDS	1994	3700	.	-	0	ID=cds-WP_135369663.1;Parent=gene-C9F00_RS13925;Dbxref=GenBank:WP_135369663.1;Name=WP_135369663.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9F00_RS13925;product=amidohydrolase;protein_id=WP_135369663.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	3853	5004	.	-	.	ID=gene-C9F00_RS13930;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9F00_RS13930;old_locus_tag=C9F00_14260
NZ_PYKC01000085.1	Protein Homology	CDS	3853	5004	.	-	0	ID=cds-WP_000824313.1;Parent=gene-C9F00_RS13930;Dbxref=GenBank:WP_000824313.1;Name=WP_000824313.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9F00_RS13930;product=porin OmpS2;protein_id=WP_000824313.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	5484	6215	.	-	.	ID=gene-C9F00_RS13940;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9F00_RS13940;old_locus_tag=C9F00_14270
NZ_PYKC01000085.1	Protein Homology	CDS	5484	6215	.	-	0	ID=cds-WP_001080048.1;Parent=gene-C9F00_RS13940;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9F00_RS13940;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	6342	6677	.	+	.	ID=gene-C9F00_RS13945;Name=C9F00_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13945;old_locus_tag=C9F00_14275
NZ_PYKC01000085.1	Protein Homology	CDS	6342	6677	.	+	0	ID=cds-WP_000524877.1;Parent=gene-C9F00_RS13945;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9F00_RS13945;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	6739	8121	.	-	.	ID=gene-C9F00_RS13950;Name=C9F00_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13950;old_locus_tag=C9F00_14280
NZ_PYKC01000085.1	Protein Homology	CDS	6739	8121	.	-	0	ID=cds-WP_000412353.1;Parent=gene-C9F00_RS13950;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9F00_RS13950;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	8420	9364	.	-	.	ID=gene-C9F00_RS13955;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9F00_RS13955;old_locus_tag=C9F00_14285
NZ_PYKC01000085.1	Protein Homology	CDS	8420	9364	.	-	0	ID=cds-WP_000769294.1;Parent=gene-C9F00_RS13955;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9F00_RS13955;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	9891	11420	.	+	.	ID=gene-C9F00_RS13960;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9F00_RS13960;old_locus_tag=C9F00_14290
NZ_PYKC01000085.1	Protein Homology	CDS	9891	11420	.	+	0	ID=cds-WP_001219360.1;Parent=gene-C9F00_RS13960;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9F00_RS13960;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	11431	12819	.	+	.	ID=gene-C9F00_RS13965;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9F00_RS13965;old_locus_tag=C9F00_14295
NZ_PYKC01000085.1	Protein Homology	CDS	11431	12819	.	+	0	ID=cds-WP_000014056.1;Parent=gene-C9F00_RS13965;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F00_RS13965;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	12994	14028	.	-	.	ID=gene-C9F00_RS13970;Name=C9F00_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13970;old_locus_tag=C9F00_14300
NZ_PYKC01000085.1	Protein Homology	CDS	12994	14028	.	-	0	ID=cds-WP_001118268.1;Parent=gene-C9F00_RS13970;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9F00_RS13970;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	14164	14334	.	+	.	ID=gene-C9F00_RS24835;Name=C9F00_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24835;old_locus_tag=C9F00_14305
NZ_PYKC01000085.1	Protein Homology	CDS	14164	14334	.	+	0	ID=cds-WP_001539987.1;Parent=gene-C9F00_RS24835;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=C9F00_RS24835;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	14446	14808	.	+	.	ID=gene-C9F00_RS13980;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9F00_RS13980;old_locus_tag=C9F00_14310
NZ_PYKC01000085.1	Protein Homology	CDS	14446	14808	.	+	0	ID=cds-WP_000500278.1;Parent=gene-C9F00_RS13980;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9F00_RS13980;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	14795	15124	.	+	.	ID=gene-C9F00_RS13985;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9F00_RS13985;old_locus_tag=C9F00_14315
NZ_PYKC01000085.1	Protein Homology	CDS	14795	15124	.	+	0	ID=cds-WP_135369116.1;Parent=gene-C9F00_RS13985;Dbxref=GenBank:WP_135369116.1;Name=WP_135369116.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=C9F00_RS13985;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_135369116.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	15159	15980	.	-	.	ID=gene-C9F00_RS13990;Name=C9F00_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13990;old_locus_tag=C9F00_14320
NZ_PYKC01000085.1	Protein Homology	CDS	15159	15980	.	-	0	ID=cds-WP_000549649.1;Parent=gene-C9F00_RS13990;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9F00_RS13990;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	16249	16497	.	-	.	ID=gene-C9F00_RS13995;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9F00_RS13995;old_locus_tag=C9F00_14325
NZ_PYKC01000085.1	Protein Homology	CDS	16249	16497	.	-	0	ID=cds-WP_047606675.1;Parent=gene-C9F00_RS13995;Dbxref=GenBank:WP_047606675.1;Name=WP_047606675.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=C9F00_RS13995;product=acid resistance repetitive basic protein Asr;protein_id=WP_047606675.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	16733	16825	.	+	.	ID=gene-C9F00_RS24200;Name=C9F00_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24200
NZ_PYKC01000085.1	Protein Homology	CDS	16733	16825	.	+	0	ID=cds-WP_001068154.1;Parent=gene-C9F00_RS24200;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9F00_RS24200;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	16892	18145	.	-	.	ID=gene-C9F00_RS14000;Name=C9F00_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14000;old_locus_tag=C9F00_14330
NZ_PYKC01000085.1	Protein Homology	CDS	16892	18145	.	-	0	ID=cds-WP_000091796.1;Parent=gene-C9F00_RS14000;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9F00_RS14000;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	18265	19164	.	+	.	ID=gene-C9F00_RS14005;Name=C9F00_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14005;old_locus_tag=C9F00_14335
NZ_PYKC01000085.1	Protein Homology	CDS	18265	19164	.	+	0	ID=cds-WP_001019577.1;Parent=gene-C9F00_RS14005;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9F00_RS14005;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	19292	20512	.	+	.	ID=gene-C9F00_RS14010;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=C9F00_RS14010;old_locus_tag=C9F00_14345
NZ_PYKC01000085.1	Protein Homology	CDS	19292	20512	.	+	0	ID=cds-WP_000225087.1;Parent=gene-C9F00_RS14010;Dbxref=GenBank:WP_000225087.1;Name=WP_000225087.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9F00_RS14010;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225087.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	20638	21333	.	+	.	ID=gene-C9F00_RS14015;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9F00_RS14015;old_locus_tag=C9F00_14350
NZ_PYKC01000085.1	Protein Homology	CDS	20638	21333	.	+	0	ID=cds-WP_000919233.1;Parent=gene-C9F00_RS14015;Dbxref=GenBank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9F00_RS14015;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	21289	22578	.	-	.	ID=gene-C9F00_RS14020;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9F00_RS14020;old_locus_tag=C9F00_14355
NZ_PYKC01000085.1	Protein Homology	CDS	21289	22578	.	-	0	ID=cds-WP_023228317.1;Parent=gene-C9F00_RS14020;Dbxref=GenBank:WP_023228317.1;Name=WP_023228317.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9F00_RS14020;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_023228317.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	22714	23862	.	-	.	ID=gene-C9F00_RS14025;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9F00_RS14025;old_locus_tag=C9F00_14360
NZ_PYKC01000085.1	Protein Homology	CDS	22714	23862	.	-	0	ID=cds-WP_000593088.1;Parent=gene-C9F00_RS14025;Dbxref=GenBank:WP_000593088.1;Name=WP_000593088.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9F00_RS14025;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593088.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	23862	24509	.	-	.	ID=gene-C9F00_RS14030;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9F00_RS14030;old_locus_tag=C9F00_14365
NZ_PYKC01000085.1	Protein Homology	CDS	23862	24509	.	-	0	ID=cds-WP_000379677.1;Parent=gene-C9F00_RS14030;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9F00_RS14030;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	24519	25421	.	-	.	ID=gene-C9F00_RS14035;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9F00_RS14035;old_locus_tag=C9F00_14370
NZ_PYKC01000085.1	Protein Homology	CDS	24519	25421	.	-	0	ID=cds-WP_001211193.1;Parent=gene-C9F00_RS14035;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9F00_RS14035;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	25450	26160	.	-	.	ID=gene-C9F00_RS14040;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F00_RS14040;old_locus_tag=C9F00_14375
NZ_PYKC01000085.1	Protein Homology	CDS	25450	26160	.	-	0	ID=cds-WP_135369115.1;Parent=gene-C9F00_RS14040;Dbxref=GenBank:WP_135369115.1;Name=WP_135369115.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9F00_RS14040;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_135369115.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	26465	27079	.	-	.	ID=gene-C9F00_RS14045;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9F00_RS14045;old_locus_tag=C9F00_14380
NZ_PYKC01000085.1	Protein Homology	CDS	26465	27079	.	-	0	ID=cds-WP_000206562.1;Parent=gene-C9F00_RS14045;Dbxref=GenBank:WP_000206562.1;Name=WP_000206562.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9F00_RS14045;product=Tat proofreading chaperone DmsD;protein_id=WP_000206562.1;transl_table=11
NZ_PYKC01000085.1	RefSeq	gene	27122	27976	.	-	.	ID=gene-C9F00_RS14050;Name=C9F00_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14050;old_locus_tag=C9F00_14385
NZ_PYKC01000085.1	Protein Homology	CDS	27122	27976	.	-	0	ID=cds-WP_135369114.1;Parent=gene-C9F00_RS14050;Dbxref=GenBank:WP_135369114.1;Name=WP_135369114.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9F00_RS14050;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369114.1;transl_table=11
##sequence-region NZ_PYKC01000003.1 1 89037
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000003.1	RefSeq	region	1	89037	.	+	.	ID=NZ_PYKC01000003.1:1..89037;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000003.1	RefSeq	gene	213	758	.	-	.	ID=gene-C9F00_RS00445;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9F00_RS00445;old_locus_tag=C9F00_00455
NZ_PYKC01000003.1	Protein Homology	CDS	213	758	.	-	0	ID=cds-WP_000853982.1;Parent=gene-C9F00_RS00445;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9F00_RS00445;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	770	2221	.	-	.	ID=gene-C9F00_RS00450;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9F00_RS00450;old_locus_tag=C9F00_00460
NZ_PYKC01000003.1	Protein Homology	CDS	770	2221	.	-	0	ID=cds-WP_000545688.1;Parent=gene-C9F00_RS00450;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9F00_RS00450;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	2260	2874	.	-	.	ID=gene-C9F00_RS00455;Name=C9F00_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00455;old_locus_tag=C9F00_00465
NZ_PYKC01000003.1	Protein Homology	CDS	2260	2874	.	-	0	ID=cds-WP_000378898.1;Parent=gene-C9F00_RS00455;Dbxref=GenBank:WP_000378898.1;Name=WP_000378898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9F00_RS00455;product=IMPACT family protein;protein_id=WP_000378898.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	2874	4205	.	-	.	ID=gene-C9F00_RS00460;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9F00_RS00460;old_locus_tag=C9F00_00470
NZ_PYKC01000003.1	Protein Homology	CDS	2874	4205	.	-	0	ID=cds-WP_000444529.1;Parent=gene-C9F00_RS00460;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9F00_RS00460;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	4395	6584	.	+	.	ID=gene-C9F00_RS00465;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9F00_RS00465;old_locus_tag=C9F00_00475
NZ_PYKC01000003.1	Protein Homology	CDS	4395	6584	.	+	0	ID=cds-WP_000966001.1;Parent=gene-C9F00_RS00465;Dbxref=GenBank:WP_000966001.1;Name=WP_000966001.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9F00_RS00465;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966001.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	6594	7757	.	+	.	ID=gene-C9F00_RS00470;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9F00_RS00470;old_locus_tag=C9F00_00480
NZ_PYKC01000003.1	Protein Homology	CDS	6594	7757	.	+	0	ID=cds-WP_031606086.1;Parent=gene-C9F00_RS00470;Dbxref=GenBank:WP_031606086.1;Name=WP_031606086.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9F00_RS00470;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_031606086.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	7954	9777	.	-	.	ID=gene-C9F00_RS00475;Name=C9F00_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00475;old_locus_tag=C9F00_00485
NZ_PYKC01000003.1	Protein Homology	CDS	7954	9777	.	-	0	ID=cds-WP_000669901.1;Parent=gene-C9F00_RS00475;Dbxref=GenBank:WP_000669901.1;Name=WP_000669901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9F00_RS00475;product=aryl-sulfate sulfotransferase;protein_id=WP_000669901.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	10031	10732	.	-	.	ID=gene-C9F00_RS00480;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9F00_RS00480;old_locus_tag=C9F00_00490
NZ_PYKC01000003.1	Protein Homology	CDS	10031	10732	.	-	0	ID=cds-WP_000209831.1;Parent=gene-C9F00_RS00480;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9F00_RS00480;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	10818	12296	.	-	.	ID=gene-C9F00_RS00485;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9F00_RS00485;old_locus_tag=C9F00_00495
NZ_PYKC01000003.1	Protein Homology	CDS	10818	12296	.	-	0	ID=cds-WP_000339764.1;Parent=gene-C9F00_RS00485;Dbxref=GenBank:WP_000339764.1;Name=WP_000339764.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9F00_RS00485;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339764.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	12482	12970	.	+	.	ID=gene-C9F00_RS00490;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9F00_RS00490;old_locus_tag=C9F00_00500
NZ_PYKC01000003.1	Protein Homology	CDS	12482	12970	.	+	0	ID=cds-WP_001192410.1;Parent=gene-C9F00_RS00490;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9F00_RS00490;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	12978	13760	.	-	.	ID=gene-C9F00_RS00495;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9F00_RS00495;old_locus_tag=C9F00_00505
NZ_PYKC01000003.1	Protein Homology	CDS	12978	13760	.	-	0	ID=cds-WP_000459653.1;Parent=gene-C9F00_RS00495;Dbxref=GenBank:WP_000459653.1;Name=WP_000459653.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9F00_RS00495;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459653.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	13802	14581	.	-	.	ID=gene-C9F00_RS00500;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9F00_RS00500;old_locus_tag=C9F00_00510
NZ_PYKC01000003.1	Protein Homology	CDS	13802	14581	.	-	0	ID=cds-WP_000257554.1;Parent=gene-C9F00_RS00500;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9F00_RS00500;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	14584	15132	.	-	.	ID=gene-C9F00_RS00505;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9F00_RS00505;old_locus_tag=C9F00_00515
NZ_PYKC01000003.1	Protein Homology	CDS	14584	15132	.	-	0	ID=cds-WP_000459612.1;Parent=gene-C9F00_RS00505;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9F00_RS00505;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	15136	15390	.	-	.	ID=gene-C9F00_RS00510;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9F00_RS00510;old_locus_tag=C9F00_00520
NZ_PYKC01000003.1	Protein Homology	CDS	15136	15390	.	-	0	ID=cds-WP_000508972.1;Parent=gene-C9F00_RS00510;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9F00_RS00510;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	15596	17236	.	-	.	ID=gene-C9F00_RS00515;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9F00_RS00515;old_locus_tag=C9F00_00525
NZ_PYKC01000003.1	Protein Homology	CDS	15596	17236	.	-	0	ID=cds-WP_000187559.1;Parent=gene-C9F00_RS00515;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9F00_RS00515;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	17233	17838	.	-	.	ID=gene-C9F00_RS00520;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9F00_RS00520;old_locus_tag=C9F00_00530
NZ_PYKC01000003.1	Protein Homology	CDS	17233	17838	.	-	0	ID=cds-WP_064012925.1;Parent=gene-C9F00_RS00520;Dbxref=GenBank:WP_064012925.1;Name=WP_064012925.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9F00_RS00520;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_064012925.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	17848	18603	.	-	.	ID=gene-C9F00_RS00525;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9F00_RS00525;old_locus_tag=C9F00_00535
NZ_PYKC01000003.1	Protein Homology	CDS	17848	18603	.	-	0	ID=cds-WP_000229009.1;Parent=gene-C9F00_RS00525;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9F00_RS00525;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	18699	20129	.	-	.	ID=gene-C9F00_RS00530;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9F00_RS00530;old_locus_tag=C9F00_00540
NZ_PYKC01000003.1	Protein Homology	CDS	18699	20129	.	-	0	ID=cds-WP_000355562.1;Parent=gene-C9F00_RS00530;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9F00_RS00530;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	20269	21030	.	-	.	ID=gene-C9F00_RS00535;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9F00_RS00535;old_locus_tag=C9F00_00545
NZ_PYKC01000003.1	Protein Homology	CDS	20269	21030	.	-	0	ID=cds-WP_000045169.1;Parent=gene-C9F00_RS00535;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9F00_RS00535;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	21289	22101	.	+	.	ID=gene-C9F00_RS00540;Name=C9F00_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00540;old_locus_tag=C9F00_00550
NZ_PYKC01000003.1	Protein Homology	CDS	21289	22101	.	+	0	ID=cds-WP_000213959.1;Parent=gene-C9F00_RS00540;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9F00_RS00540;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	22181	23524	.	-	.	ID=gene-C9F00_RS00545;Name=C9F00_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00545;old_locus_tag=C9F00_00555
NZ_PYKC01000003.1	Protein Homology	CDS	22181	23524	.	-	0	ID=cds-WP_000017952.1;Parent=gene-C9F00_RS00545;Dbxref=GenBank:WP_000017952.1;Name=WP_000017952.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9F00_RS00545;product=anaerobic sulfatase maturase;protein_id=WP_000017952.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	23848	26112	.	-	.	ID=gene-C9F00_RS00550;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=C9F00_RS00550;old_locus_tag=C9F00_00560
NZ_PYKC01000003.1	Protein Homology	CDS	23848	26112	.	-	0	ID=cds-WP_135369281.1;Parent=gene-C9F00_RS00550;Dbxref=GenBank:WP_135369281.1;Name=WP_135369281.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F00_RS00550;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_135369281.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	26361	27314	.	+	.	ID=gene-C9F00_RS00555;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9F00_RS00555;old_locus_tag=C9F00_00565
NZ_PYKC01000003.1	Protein Homology	CDS	26361	27314	.	+	0	ID=cds-WP_000569786.1;Parent=gene-C9F00_RS00555;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9F00_RS00555;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	27202	28101	.	-	.	ID=gene-C9F00_RS00560;Name=C9F00_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00560;old_locus_tag=C9F00_00570
NZ_PYKC01000003.1	Protein Homology	CDS	27202	28101	.	-	0	ID=cds-WP_001196254.1;Parent=gene-C9F00_RS00560;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9F00_RS00560;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	28182	28982	.	-	.	ID=gene-C9F00_RS00565;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9F00_RS00565;old_locus_tag=C9F00_00575
NZ_PYKC01000003.1	Protein Homology	CDS	28182	28982	.	-	0	ID=cds-WP_000285338.1;Parent=gene-C9F00_RS00565;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9F00_RS00565;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	28998	30014	.	-	.	ID=gene-C9F00_RS00570;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9F00_RS00570;old_locus_tag=C9F00_00580
NZ_PYKC01000003.1	Protein Homology	CDS	28998	30014	.	-	0	ID=cds-WP_000487685.1;Parent=gene-C9F00_RS00570;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9F00_RS00570;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	30125	30745	.	+	.	ID=gene-C9F00_RS00575;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9F00_RS00575;old_locus_tag=C9F00_00585
NZ_PYKC01000003.1	Protein Homology	CDS	30125	30745	.	+	0	ID=cds-WP_000142523.1;Parent=gene-C9F00_RS00575;Dbxref=GenBank:WP_000142523.1;Name=WP_000142523.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9F00_RS00575;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142523.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	30785	31405	.	-	.	ID=gene-C9F00_RS00580;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=C9F00_RS00580;old_locus_tag=C9F00_00590
NZ_PYKC01000003.1	Protein Homology	CDS	30785	31405	.	-	0	ID=cds-WP_000928814.1;Parent=gene-C9F00_RS00580;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9F00_RS00580;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	31469	33298	.	-	.	ID=gene-C9F00_RS00585;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9F00_RS00585;old_locus_tag=C9F00_00595
NZ_PYKC01000003.1	Protein Homology	CDS	31469	33298	.	-	0	ID=cds-WP_001533487.1;Parent=gene-C9F00_RS00585;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9F00_RS00585;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	33382	34251	.	-	.	ID=gene-C9F00_RS00590;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9F00_RS00590;old_locus_tag=C9F00_00600
NZ_PYKC01000003.1	Protein Homology	CDS	33382	34251	.	-	0	ID=cds-WP_001201692.1;Parent=gene-C9F00_RS00590;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9F00_RS00590;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	34416	34883	.	+	.	ID=gene-C9F00_RS00595;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=C9F00_RS00595;old_locus_tag=C9F00_00605
NZ_PYKC01000003.1	Protein Homology	CDS	34416	34883	.	+	0	ID=cds-WP_001277136.1;Parent=gene-C9F00_RS00595;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9F00_RS00595;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	34927	35814	.	+	.	ID=gene-C9F00_RS00600;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F00_RS00600;old_locus_tag=C9F00_00610
NZ_PYKC01000003.1	Protein Homology	CDS	34927	35814	.	+	0	ID=cds-WP_000339076.1;Parent=gene-C9F00_RS00600;Dbxref=GenBank:WP_000339076.1;Name=WP_000339076.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9F00_RS00600;product=EamA family transporter RarD;protein_id=WP_000339076.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	35854	36150	.	-	.	ID=gene-C9F00_RS00605;Name=C9F00_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00605;old_locus_tag=C9F00_00615
NZ_PYKC01000003.1	Protein Homology	CDS	35854	36150	.	-	0	ID=cds-WP_001156607.1;Parent=gene-C9F00_RS00605;Dbxref=GenBank:WP_001156607.1;Name=WP_001156607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9F00_RS00605;product=hypothetical protein;protein_id=WP_001156607.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	36325	36705	.	+	.	ID=gene-C9F00_RS00610;Name=C9F00_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00610;old_locus_tag=C9F00_00620
NZ_PYKC01000003.1	Protein Homology	CDS	36325	36705	.	+	0	ID=cds-WP_023139942.1;Parent=gene-C9F00_RS00610;Dbxref=GenBank:WP_023139942.1;Name=WP_023139942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=C9F00_RS00610;product=hypothetical protein;protein_id=WP_023139942.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	36753	37703	.	-	.	ID=gene-C9F00_RS00615;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9F00_RS00615;old_locus_tag=C9F00_00625
NZ_PYKC01000003.1	Protein Homology	CDS	36753	37703	.	-	0	ID=cds-WP_000947139.1;Parent=gene-C9F00_RS00615;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9F00_RS00615;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	37859	37915	.	-	.	ID=gene-C9F00_RS24270;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9F00_RS24270
NZ_PYKC01000003.1	Protein Homology	CDS	37859	37915	.	-	0	ID=cds-WP_212723238.1;Parent=gene-C9F00_RS24270;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9F00_RS24270;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	38175	40337	.	-	.	ID=gene-C9F00_RS00625;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9F00_RS00625;old_locus_tag=C9F00_00635
NZ_PYKC01000003.1	Protein Homology	CDS	38175	40337	.	-	0	ID=cds-WP_000383436.1;Parent=gene-C9F00_RS00625;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9F00_RS00625;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	40473	41189	.	-	.	ID=gene-C9F00_RS00630;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9F00_RS00630;old_locus_tag=C9F00_00640
NZ_PYKC01000003.1	Protein Homology	CDS	40473	41189	.	-	0	ID=cds-WP_001213560.1;Parent=gene-C9F00_RS00630;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9F00_RS00630;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	41189	42091	.	-	.	ID=gene-C9F00_RS00635;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9F00_RS00635;old_locus_tag=C9F00_00645
NZ_PYKC01000003.1	Protein Homology	CDS	41189	42091	.	-	0	ID=cds-WP_135492079.1;Parent=gene-C9F00_RS00635;Dbxref=GenBank:WP_135492079.1;Name=WP_135492079.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9F00_RS00635;product=tyrosine recombinase XerC;protein_id=WP_135492079.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	42088	42795	.	-	.	ID=gene-C9F00_RS00640;Name=C9F00_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00640;old_locus_tag=C9F00_00650
NZ_PYKC01000003.1	Protein Homology	CDS	42088	42795	.	-	0	ID=cds-WP_000812763.1;Parent=gene-C9F00_RS00640;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9F00_RS00640;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	42792	43616	.	-	.	ID=gene-C9F00_RS00645;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9F00_RS00645;old_locus_tag=C9F00_00655
NZ_PYKC01000003.1	Protein Homology	CDS	42792	43616	.	-	0	ID=cds-WP_001160671.1;Parent=gene-C9F00_RS00645;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9F00_RS00645;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	43653	43856	.	-	.	ID=gene-C9F00_RS00650;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=C9F00_RS00650;old_locus_tag=C9F00_00660
NZ_PYKC01000003.1	Protein Homology	CDS	43653	43856	.	-	0	ID=cds-WP_000799903.1;Parent=gene-C9F00_RS00650;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9F00_RS00650;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	44042	44293	.	+	.	ID=gene-C9F00_RS24025;Name=C9F00_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24025;old_locus_tag=C9F00_00665
NZ_PYKC01000003.1	GeneMarkS-2+	CDS	44042	44293	.	+	0	ID=cds-WP_001621231.1;Parent=gene-C9F00_RS24025;Dbxref=GenBank:WP_001621231.1;Name=WP_001621231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24025;product=hypothetical protein;protein_id=WP_001621231.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	pseudogene	44263	44565	.	+	.	ID=gene-C9F00_RS00655;Name=C9F00_RS00655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS00655;old_locus_tag=C9F00_00670;partial=true;pseudo=true;start_range=.,44263
NZ_PYKC01000003.1	Protein Homology	CDS	44263	44565	.	+	0	ID=cds-C9F00_RS00655;Parent=gene-C9F00_RS00655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=C9F00_RS00655;partial=true;product=hypothetical protein;pseudo=true;start_range=.,44263;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	44553	44942	.	+	.	ID=gene-C9F00_RS00660;Name=C9F00_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00660;old_locus_tag=C9F00_00675
NZ_PYKC01000003.1	Protein Homology	CDS	44553	44942	.	+	0	ID=cds-WP_135369566.1;Parent=gene-C9F00_RS00660;Dbxref=GenBank:WP_135369566.1;Name=WP_135369566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9F00_RS00660;product=DUF3021 family protein;protein_id=WP_135369566.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	45012	45332	.	+	.	ID=gene-C9F00_RS00665;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9F00_RS00665;old_locus_tag=C9F00_00680
NZ_PYKC01000003.1	Protein Homology	CDS	45012	45332	.	+	0	ID=cds-WP_000999921.1;Parent=gene-C9F00_RS00665;Dbxref=GenBank:WP_000999921.1;Name=WP_000999921.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9F00_RS00665;product=iron donor protein CyaY;protein_id=WP_000999921.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	45410	47956	.	-	.	ID=gene-C9F00_RS00670;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9F00_RS00670;old_locus_tag=C9F00_00685
NZ_PYKC01000003.1	Protein Homology	CDS	45410	47956	.	-	0	ID=cds-WP_000281718.1;Parent=gene-C9F00_RS00670;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9F00_RS00670;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	48333	49274	.	+	.	ID=gene-C9F00_RS00675;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9F00_RS00675;old_locus_tag=C9F00_00690
NZ_PYKC01000003.1	Protein Homology	CDS	48333	49274	.	+	0	ID=cds-WP_001521319.1;Parent=gene-C9F00_RS00675;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9F00_RS00675;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	49271	50011	.	+	.	ID=gene-C9F00_RS00680;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9F00_RS00680;old_locus_tag=C9F00_00695
NZ_PYKC01000003.1	Protein Homology	CDS	49271	50011	.	+	0	ID=cds-WP_000025491.1;Parent=gene-C9F00_RS00680;Dbxref=GenBank:WP_000025491.1;Name=WP_000025491.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9F00_RS00680;product=uroporphyrinogen-III synthase;protein_id=WP_000025491.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	50033	51202	.	+	.	ID=gene-C9F00_RS00685;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9F00_RS00685;old_locus_tag=C9F00_00700
NZ_PYKC01000003.1	Protein Homology	CDS	50033	51202	.	+	0	ID=cds-WP_000138962.1;Parent=gene-C9F00_RS00685;Dbxref=GenBank:WP_000138962.1;Name=WP_000138962.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9F00_RS00685;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138962.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	51205	52401	.	+	.	ID=gene-C9F00_RS00690;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9F00_RS00690;old_locus_tag=C9F00_00705
NZ_PYKC01000003.1	Protein Homology	CDS	51205	52401	.	+	0	ID=cds-WP_031606719.1;Parent=gene-C9F00_RS00690;Dbxref=GenBank:WP_031606719.1;Name=WP_031606719.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9F00_RS00690;product=protoheme IX biogenesis protein HemY;protein_id=WP_031606719.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	52983	53059	.	-	.	ID=gene-C9F00_RS00695;Name=C9F00_RS00695;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS00695;old_locus_tag=C9F00_00710
NZ_PYKC01000003.1	tRNAscan-SE	tRNA	52983	53059	.	-	.	ID=rna-C9F00_RS00695;Parent=gene-C9F00_RS00695;anticodon=(pos:complement(53023..53025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00695;product=tRNA-Pro
NZ_PYKC01000003.1	tRNAscan-SE	exon	52983	53059	.	-	.	ID=exon-C9F00_RS00695-1;Parent=rna-C9F00_RS00695;anticodon=(pos:complement(53023..53025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00695;product=tRNA-Pro
NZ_PYKC01000003.1	RefSeq	gene	53102	53188	.	-	.	ID=gene-C9F00_RS00700;Name=C9F00_RS00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS00700;old_locus_tag=C9F00_00715
NZ_PYKC01000003.1	tRNAscan-SE	tRNA	53102	53188	.	-	.	ID=rna-C9F00_RS00700;Parent=gene-C9F00_RS00700;anticodon=(pos:complement(53152..53154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00700;product=tRNA-Leu
NZ_PYKC01000003.1	tRNAscan-SE	exon	53102	53188	.	-	.	ID=exon-C9F00_RS00700-1;Parent=rna-C9F00_RS00700;anticodon=(pos:complement(53152..53154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00700;product=tRNA-Leu
NZ_PYKC01000003.1	RefSeq	gene	53209	53284	.	-	.	ID=gene-C9F00_RS00705;Name=C9F00_RS00705;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS00705;old_locus_tag=C9F00_00720
NZ_PYKC01000003.1	tRNAscan-SE	tRNA	53209	53284	.	-	.	ID=rna-C9F00_RS00705;Parent=gene-C9F00_RS00705;anticodon=(pos:complement(53249..53251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00705;product=tRNA-His
NZ_PYKC01000003.1	tRNAscan-SE	exon	53209	53284	.	-	.	ID=exon-C9F00_RS00705-1;Parent=rna-C9F00_RS00705;anticodon=(pos:complement(53249..53251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00705;product=tRNA-His
NZ_PYKC01000003.1	RefSeq	gene	53339	53415	.	-	.	ID=gene-C9F00_RS00710;Name=C9F00_RS00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS00710;old_locus_tag=C9F00_00725
NZ_PYKC01000003.1	tRNAscan-SE	tRNA	53339	53415	.	-	.	ID=rna-C9F00_RS00710;Parent=gene-C9F00_RS00710;anticodon=(pos:complement(53379..53381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00710;product=tRNA-Arg
NZ_PYKC01000003.1	tRNAscan-SE	exon	53339	53415	.	-	.	ID=exon-C9F00_RS00710-1;Parent=rna-C9F00_RS00710;anticodon=(pos:complement(53379..53381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00710;product=tRNA-Arg
NZ_PYKC01000003.1	RefSeq	gene	53518	54903	.	-	.	ID=gene-C9F00_RS00715;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=C9F00_RS00715;old_locus_tag=C9F00_00730
NZ_PYKC01000003.1	Protein Homology	CDS	53518	54903	.	-	0	ID=cds-WP_000818378.1;Parent=gene-C9F00_RS00715;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9F00_RS00715;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	55110	55850	.	-	.	ID=gene-C9F00_RS00720;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=C9F00_RS00720;old_locus_tag=C9F00_00735
NZ_PYKC01000003.1	Protein Homology	CDS	55110	55850	.	-	0	ID=cds-WP_000183623.1;Parent=gene-C9F00_RS00720;Dbxref=GenBank:WP_000183623.1;Name=WP_000183623.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9F00_RS00720;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183623.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	55847	57205	.	-	.	ID=gene-C9F00_RS00725;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9F00_RS00725;old_locus_tag=C9F00_00740
NZ_PYKC01000003.1	Protein Homology	CDS	55847	57205	.	-	0	ID=cds-WP_000055605.1;Parent=gene-C9F00_RS00725;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9F00_RS00725;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	57202	58281	.	-	.	ID=gene-C9F00_RS00730;Name=C9F00_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00730;old_locus_tag=C9F00_00745
NZ_PYKC01000003.1	Protein Homology	CDS	57202	58281	.	-	0	ID=cds-WP_000217196.1;Parent=gene-C9F00_RS00730;Dbxref=GenBank:WP_000217196.1;Name=WP_000217196.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9F00_RS00730;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217196.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	58278	59528	.	-	.	ID=gene-C9F00_RS00735;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9F00_RS00735;old_locus_tag=C9F00_00750
NZ_PYKC01000003.1	Protein Homology	CDS	58278	59528	.	-	0	ID=cds-WP_000050294.1;Parent=gene-C9F00_RS00735;Dbxref=GenBank:WP_000050294.1;Name=WP_000050294.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9F00_RS00735;product=lipid III flippase WzxE;protein_id=WP_000050294.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	59530	60660	.	-	.	ID=gene-C9F00_RS00740;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9F00_RS00740;old_locus_tag=C9F00_00755
NZ_PYKC01000003.1	Protein Homology	CDS	59530	60660	.	-	0	ID=cds-WP_000612080.1;Parent=gene-C9F00_RS00740;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9F00_RS00740;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	60665	61342	.	-	.	ID=gene-C9F00_RS00745;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9F00_RS00745;old_locus_tag=C9F00_00760
NZ_PYKC01000003.1	Protein Homology	CDS	60665	61342	.	-	0	ID=cds-WP_001145157.1;Parent=gene-C9F00_RS00745;Dbxref=GenBank:WP_001145157.1;Name=WP_001145157.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9F00_RS00745;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145157.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	61320	61634	.	-	.	ID=gene-C9F00_RS24640;Name=C9F00_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24640;old_locus_tag=C9F00_00765
NZ_PYKC01000003.1	Protein Homology	CDS	61320	61634	.	-	0	ID=cds-WP_223149427.1;Parent=gene-C9F00_RS24640;Dbxref=GenBank:WP_223149427.1;Name=WP_223149427.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9F00_RS24640;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223149427.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	61577	62644	.	-	.	ID=gene-C9F00_RS00755;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9F00_RS00755;old_locus_tag=C9F00_00770
NZ_PYKC01000003.1	Protein Homology	CDS	61577	62644	.	-	0	ID=cds-WP_000822152.1;Parent=gene-C9F00_RS00755;Dbxref=GenBank:WP_000822152.1;Name=WP_000822152.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9F00_RS00755;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822152.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	62644	63906	.	-	.	ID=gene-C9F00_RS00760;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9F00_RS00760;old_locus_tag=C9F00_00775
NZ_PYKC01000003.1	Protein Homology	CDS	62644	63906	.	-	0	ID=cds-WP_000011225.1;Parent=gene-C9F00_RS00760;Dbxref=GenBank:WP_000011225.1;Name=WP_000011225.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9F00_RS00760;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011225.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	63903	65033	.	-	.	ID=gene-C9F00_RS00765;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9F00_RS00765;old_locus_tag=C9F00_00780
NZ_PYKC01000003.1	Protein Homology	CDS	63903	65033	.	-	0	ID=cds-WP_000866685.1;Parent=gene-C9F00_RS00765;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9F00_RS00765;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	65089	66135	.	-	.	ID=gene-C9F00_RS00770;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9F00_RS00770;old_locus_tag=C9F00_00785
NZ_PYKC01000003.1	Protein Homology	CDS	65089	66135	.	-	0	ID=cds-WP_000193420.1;Parent=gene-C9F00_RS00770;Dbxref=GenBank:WP_000193420.1;Name=WP_000193420.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9F00_RS00770;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193420.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	66147	67250	.	-	.	ID=gene-C9F00_RS00775;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9F00_RS00775;old_locus_tag=C9F00_00790
NZ_PYKC01000003.1	Protein Homology	CDS	66147	67250	.	-	0	ID=cds-WP_000771937.1;Parent=gene-C9F00_RS00775;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=C9F00_RS00775;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	67480	68739	.	-	.	ID=gene-C9F00_RS00780;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9F00_RS00780;old_locus_tag=C9F00_00795
NZ_PYKC01000003.1	Protein Homology	CDS	67480	68739	.	-	0	ID=cds-WP_001054532.1;Parent=gene-C9F00_RS00780;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9F00_RS00780;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	68827	68910	.	-	.	ID=gene-C9F00_RS24280;Name=C9F00_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24280
NZ_PYKC01000003.1	Protein Homology	CDS	68827	68910	.	-	0	ID=cds-WP_134820045.1;Parent=gene-C9F00_RS24280;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9F00_RS24280;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	69158	69487	.	-	.	ID=gene-C9F00_RS00790;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9F00_RS00790;old_locus_tag=C9F00_00805
NZ_PYKC01000003.1	Protein Homology	CDS	69158	69487	.	-	0	ID=cds-WP_001280776.1;Parent=gene-C9F00_RS00790;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9F00_RS00790;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	69631	70896	.	+	.	ID=gene-C9F00_RS00795;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9F00_RS00795;old_locus_tag=C9F00_00810
NZ_PYKC01000003.1	Protein Homology	CDS	69631	70896	.	+	0	ID=cds-WP_000047525.1;Parent=gene-C9F00_RS00795;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9F00_RS00795;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	71015	72496	.	+	.	ID=gene-C9F00_RS00800;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=C9F00_RS00800;old_locus_tag=C9F00_00820
NZ_PYKC01000003.1	Protein Homology	CDS	71015	72496	.	+	0	ID=cds-WP_001089447.1;Parent=gene-C9F00_RS00800;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9F00_RS00800;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	72536	74560	.	-	.	ID=gene-C9F00_RS00805;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9F00_RS00805;old_locus_tag=C9F00_00825
NZ_PYKC01000003.1	Protein Homology	CDS	72536	74560	.	-	0	ID=cds-WP_001238835.1;Parent=gene-C9F00_RS00805;Dbxref=GenBank:WP_001238835.1;Name=WP_001238835.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9F00_RS00805;product=DNA helicase Rep;protein_id=WP_001238835.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	pseudogene	74660	74797	.	-	.	ID=gene-C9F00_RS00810;Name=C9F00_RS00810;end_range=74797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS00810;old_locus_tag=C9F00_00830;partial=true;pseudo=true
NZ_PYKC01000003.1	Protein Homology	CDS	74660	74797	.	-	0	ID=cds-C9F00_RS00810;Parent=gene-C9F00_RS00810;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=74797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=C9F00_RS00810;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
NZ_PYKC01000003.1	RefSeq	pseudogene	74749	74904	.	-	.	ID=gene-C9F00_RS24675;Name=C9F00_RS24675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24675;partial=true;pseudo=true;start_range=.,74749
NZ_PYKC01000003.1	Protein Homology	CDS	74749	74904	.	-	0	ID=cds-C9F00_RS24675;Parent=gene-C9F00_RS24675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=C9F00_RS24675;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,74749;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	75098	75379	.	+	.	ID=gene-C9F00_RS00820;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9F00_RS00820;old_locus_tag=C9F00_00840
NZ_PYKC01000003.1	Protein Homology	CDS	75098	75379	.	+	0	ID=cds-WP_001096806.1;Parent=gene-C9F00_RS00820;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9F00_RS00820;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	75471	76946	.	-	.	ID=gene-C9F00_RS00825;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9F00_RS00825;old_locus_tag=C9F00_00845
NZ_PYKC01000003.1	Protein Homology	CDS	75471	76946	.	-	0	ID=cds-WP_135492081.1;Parent=gene-C9F00_RS00825;Dbxref=GenBank:WP_135492081.1;Name=WP_135492081.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9F00_RS00825;product=ketol-acid reductoisomerase;protein_id=WP_135492081.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	77111	77998	.	+	.	ID=gene-C9F00_RS00830;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=C9F00_RS00830;old_locus_tag=C9F00_00850
NZ_PYKC01000003.1	Protein Homology	CDS	77111	77998	.	+	0	ID=cds-WP_000365798.1;Parent=gene-C9F00_RS00830;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9F00_RS00830;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	78001	78342	.	-	.	ID=gene-C9F00_RS00835;Name=C9F00_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00835;old_locus_tag=C9F00_00855
NZ_PYKC01000003.1	Protein Homology	CDS	78001	78342	.	-	0	ID=cds-WP_000560824.1;Parent=gene-C9F00_RS00835;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9F00_RS00835;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	78339	78656	.	-	.	ID=gene-C9F00_RS00840;Name=C9F00_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00840;old_locus_tag=C9F00_00860
NZ_PYKC01000003.1	Protein Homology	CDS	78339	78656	.	-	0	ID=cds-WP_000535852.1;Parent=gene-C9F00_RS00840;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9F00_RS00840;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	78939	80483	.	-	.	ID=gene-C9F00_RS00845;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9F00_RS00845;old_locus_tag=C9F00_00865
NZ_PYKC01000003.1	Protein Homology	CDS	78939	80483	.	-	0	ID=cds-WP_001518457.1;Parent=gene-C9F00_RS00845;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9F00_RS00845;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	80486	82336	.	-	.	ID=gene-C9F00_RS00850;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9F00_RS00850;old_locus_tag=C9F00_00870
NZ_PYKC01000003.1	Protein Homology	CDS	80486	82336	.	-	0	ID=cds-WP_135492083.1;Parent=gene-C9F00_RS00850;Dbxref=GenBank:WP_135492083.1;Name=WP_135492083.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F00_RS00850;product=dihydroxy-acid dehydratase;protein_id=WP_135492083.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	82496	83425	.	-	.	ID=gene-C9F00_RS00855;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9F00_RS00855;old_locus_tag=C9F00_00875
NZ_PYKC01000003.1	Protein Homology	CDS	82496	83425	.	-	0	ID=cds-WP_000208532.1;Parent=gene-C9F00_RS00855;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9F00_RS00855;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	83443	83706	.	-	.	ID=gene-C9F00_RS00860;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9F00_RS00860;old_locus_tag=C9F00_00880
NZ_PYKC01000003.1	Protein Homology	CDS	83443	83706	.	-	0	ID=cds-WP_000983260.1;Parent=gene-C9F00_RS00860;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9F00_RS00860;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	83703	85349	.	-	.	ID=gene-C9F00_RS00865;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9F00_RS00865;old_locus_tag=C9F00_00885
NZ_PYKC01000003.1	Protein Homology	CDS	83703	85349	.	-	0	ID=cds-WP_001012561.1;Parent=gene-C9F00_RS00865;Dbxref=GenBank:WP_001012561.1;Name=WP_001012561.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9F00_RS00865;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012561.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	85352	85402	.	-	.	ID=gene-C9F00_RS24165;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9F00_RS24165
NZ_PYKC01000003.1	Protein Homology	CDS	85352	85402	.	-	0	ID=cds-WP_192930503.1;Parent=gene-C9F00_RS24165;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=C9F00_RS24165;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	85489	85587	.	-	.	ID=gene-C9F00_RS00870;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9F00_RS00870;old_locus_tag=C9F00_00890
NZ_PYKC01000003.1	Protein Homology	CDS	85489	85587	.	-	0	ID=cds-WP_001311244.1;Parent=gene-C9F00_RS00870;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9F00_RS00870;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	85939	87459	.	+	.	ID=gene-C9F00_RS00880;Name=C9F00_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS00880;old_locus_tag=C9F00_00895
NZ_PYKC01000003.1	Protein Homology	CDS	85939	87459	.	+	0	ID=cds-WP_135492085.1;Parent=gene-C9F00_RS00880;Dbxref=GenBank:WP_135492085.1;Name=WP_135492085.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F00_RS00880;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_135492085.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	87484	87822	.	-	.	ID=gene-C9F00_RS00885;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9F00_RS00885;old_locus_tag=C9F00_00900
NZ_PYKC01000003.1	Protein Homology	CDS	87484	87822	.	-	0	ID=cds-WP_000840996.1;Parent=gene-C9F00_RS00885;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9F00_RS00885;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	87929	88777	.	+	.	ID=gene-C9F00_RS00890;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9F00_RS00890;old_locus_tag=C9F00_00905
NZ_PYKC01000003.1	Protein Homology	CDS	87929	88777	.	+	0	ID=cds-WP_001541181.1;Parent=gene-C9F00_RS00890;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9F00_RS00890;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11
NZ_PYKC01000003.1	RefSeq	gene	88878	88953	.	-	.	ID=gene-C9F00_RS00895;Name=C9F00_RS00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS00895;old_locus_tag=C9F00_00910
NZ_PYKC01000003.1	tRNAscan-SE	tRNA	88878	88953	.	-	.	ID=rna-C9F00_RS00895;Parent=gene-C9F00_RS00895;anticodon=(pos:complement(88918..88920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00895;product=tRNA-Trp
NZ_PYKC01000003.1	tRNAscan-SE	exon	88878	88953	.	-	.	ID=exon-C9F00_RS00895-1;Parent=rna-C9F00_RS00895;anticodon=(pos:complement(88918..88920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS00895;product=tRNA-Trp
##sequence-region NZ_PYKC01000040.1 1 27215
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000040.1	RefSeq	region	1	27215	.	+	.	ID=NZ_PYKC01000040.1:1..27215;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000040.1	RefSeq	gene	20	96	.	+	.	ID=gene-C9F00_RS06400;Name=C9F00_RS06400;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06400;old_locus_tag=C9F00_06525
NZ_PYKC01000040.1	tRNAscan-SE	tRNA	20	96	.	+	.	ID=rna-C9F00_RS06400;Parent=gene-C9F00_RS06400;anticodon=(pos:54..56);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06400;product=tRNA-Arg
NZ_PYKC01000040.1	tRNAscan-SE	exon	20	96	.	+	.	ID=exon-C9F00_RS06400-1;Parent=rna-C9F00_RS06400;anticodon=(pos:54..56);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06400;product=tRNA-Arg
NZ_PYKC01000040.1	RefSeq	gene	332	898	.	+	.	ID=gene-C9F00_RS06405;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9F00_RS06405;old_locus_tag=C9F00_06530
NZ_PYKC01000040.1	Protein Homology	CDS	332	898	.	+	0	ID=cds-WP_000271296.1;Parent=gene-C9F00_RS06405;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9F00_RS06405;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	895	1320	.	+	.	ID=gene-C9F00_RS06410;Name=C9F00_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06410;old_locus_tag=C9F00_06535
NZ_PYKC01000040.1	Protein Homology	CDS	895	1320	.	+	0	ID=cds-WP_001279499.1;Parent=gene-C9F00_RS06410;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9F00_RS06410;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	1397	2953	.	+	.	ID=gene-C9F00_RS06415;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9F00_RS06415;old_locus_tag=C9F00_06540
NZ_PYKC01000040.1	Protein Homology	CDS	1397	2953	.	+	0	ID=cds-WP_000611821.1;Parent=gene-C9F00_RS06415;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9F00_RS06415;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	3103	3618	.	+	.	ID=gene-C9F00_RS06420;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9F00_RS06420;old_locus_tag=C9F00_06545
NZ_PYKC01000040.1	Protein Homology	CDS	3103	3618	.	+	0	ID=cds-WP_001130194.1;Parent=gene-C9F00_RS06420;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9F00_RS06420;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	3964	5334	.	+	.	ID=gene-C9F00_RS06425;Name=C9F00_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06425;old_locus_tag=C9F00_06550
NZ_PYKC01000040.1	Protein Homology	CDS	3964	5334	.	+	0	ID=cds-WP_000645137.1;Parent=gene-C9F00_RS06425;Dbxref=GenBank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9F00_RS06425;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	5383	6921	.	-	.	ID=gene-C9F00_RS06430;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9F00_RS06430;old_locus_tag=C9F00_06555
NZ_PYKC01000040.1	Protein Homology	CDS	5383	6921	.	-	0	ID=cds-WP_001187297.1;Parent=gene-C9F00_RS06430;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9F00_RS06430;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	6938	8110	.	-	.	ID=gene-C9F00_RS06435;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9F00_RS06435;old_locus_tag=C9F00_06560
NZ_PYKC01000040.1	Protein Homology	CDS	6938	8110	.	-	0	ID=cds-WP_001275605.1;Parent=gene-C9F00_RS06435;Dbxref=GenBank:WP_001275605.1;Name=WP_001275605.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9F00_RS06435;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275605.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	8237	8767	.	-	.	ID=gene-C9F00_RS06440;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9F00_RS06440;old_locus_tag=C9F00_06565
NZ_PYKC01000040.1	Protein Homology	CDS	8237	8767	.	-	0	ID=cds-WP_000378431.1;Parent=gene-C9F00_RS06440;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9F00_RS06440;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	9264	10448	.	-	.	ID=gene-C9F00_RS06445;Name=C9F00_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06445;old_locus_tag=C9F00_06570
NZ_PYKC01000040.1	Protein Homology	CDS	9264	10448	.	-	0	ID=cds-WP_135369228.1;Parent=gene-C9F00_RS06445;Dbxref=GenBank:WP_135369228.1;Name=WP_135369228.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9F00_RS06445;product=MFS transporter;protein_id=WP_135369228.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	10613	11608	.	-	.	ID=gene-C9F00_RS06450;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9F00_RS06450;old_locus_tag=C9F00_06575
NZ_PYKC01000040.1	Protein Homology	CDS	10613	11608	.	-	0	ID=cds-WP_001216613.1;Parent=gene-C9F00_RS06450;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9F00_RS06450;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	11678	12742	.	-	.	ID=gene-C9F00_RS06455;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9F00_RS06455;old_locus_tag=C9F00_06580
NZ_PYKC01000040.1	Protein Homology	CDS	11678	12742	.	-	0	ID=cds-WP_000775021.1;Parent=gene-C9F00_RS06455;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9F00_RS06455;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	12735	13937	.	-	.	ID=gene-C9F00_RS06460;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9F00_RS06460;old_locus_tag=C9F00_06585
NZ_PYKC01000040.1	Protein Homology	CDS	12735	13937	.	-	0	ID=cds-WP_000985529.1;Parent=gene-C9F00_RS06460;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F00_RS06460;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	14292	15251	.	-	.	ID=gene-C9F00_RS06470;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9F00_RS06470;old_locus_tag=C9F00_06595
NZ_PYKC01000040.1	Protein Homology	CDS	14292	15251	.	-	0	ID=cds-WP_000777901.1;Parent=gene-C9F00_RS06470;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9F00_RS06470;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	15262	17406	.	-	.	ID=gene-C9F00_RS06475;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9F00_RS06475;old_locus_tag=C9F00_06600
NZ_PYKC01000040.1	Protein Homology	CDS	15262	17406	.	-	0	ID=cds-WP_000246626.1;Parent=gene-C9F00_RS06475;Dbxref=GenBank:WP_000246626.1;Name=WP_000246626.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9F00_RS06475;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246626.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	17379	17789	.	-	.	ID=gene-C9F00_RS06480;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9F00_RS06480;old_locus_tag=C9F00_06605
NZ_PYKC01000040.1	Protein Homology	CDS	17379	17789	.	-	0	ID=cds-WP_001275401.1;Parent=gene-C9F00_RS06480;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9F00_RS06480;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	17786	18031	.	-	.	ID=gene-C9F00_RS06485;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9F00_RS06485;old_locus_tag=C9F00_06610
NZ_PYKC01000040.1	Protein Homology	CDS	17786	18031	.	-	0	ID=cds-WP_000028870.1;Parent=gene-C9F00_RS06485;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9F00_RS06485;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	18303	18734	.	-	.	ID=gene-C9F00_RS06495;Name=C9F00_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06495;old_locus_tag=C9F00_06620
NZ_PYKC01000040.1	Protein Homology	CDS	18303	18734	.	-	0	ID=cds-WP_000209815.1;Parent=gene-C9F00_RS06495;Dbxref=GenBank:WP_000209815.1;Name=WP_000209815.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9F00_RS06495;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209815.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	18823	20157	.	+	.	ID=gene-C9F00_RS06500;Name=C9F00_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06500;old_locus_tag=C9F00_06625
NZ_PYKC01000040.1	Protein Homology	CDS	18823	20157	.	+	0	ID=cds-WP_135369230.1;Parent=gene-C9F00_RS06500;Dbxref=GenBank:WP_135369230.1;Name=WP_135369230.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F00_RS06500;product=PLP-dependent aminotransferase family protein;protein_id=WP_135369230.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	20241	20567	.	-	.	ID=gene-C9F00_RS06505;Name=C9F00_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06505;old_locus_tag=C9F00_06630
NZ_PYKC01000040.1	Protein Homology	CDS	20241	20567	.	-	0	ID=cds-WP_001519557.1;Parent=gene-C9F00_RS06505;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9F00_RS06505;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	20729	21079	.	+	.	ID=gene-C9F00_RS06510;Name=C9F00_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06510;old_locus_tag=C9F00_06635
NZ_PYKC01000040.1	Protein Homology	CDS	20729	21079	.	+	0	ID=cds-WP_000281305.1;Parent=gene-C9F00_RS06510;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9F00_RS06510;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	21114	21563	.	-	.	ID=gene-C9F00_RS06515;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9F00_RS06515;old_locus_tag=C9F00_06640
NZ_PYKC01000040.1	Protein Homology	CDS	21114	21563	.	-	0	ID=cds-WP_000492669.1;Parent=gene-C9F00_RS06515;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9F00_RS06515;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	22262	22663	.	+	.	ID=gene-C9F00_RS06525;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9F00_RS06525;old_locus_tag=C9F00_06650
NZ_PYKC01000040.1	Protein Homology	CDS	22262	22663	.	+	0	ID=cds-WP_001051100.1;Parent=gene-C9F00_RS06525;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9F00_RS06525;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	22753	22932	.	-	.	ID=gene-C9F00_RS06530;Name=C9F00_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06530;old_locus_tag=C9F00_06655
NZ_PYKC01000040.1	Protein Homology	CDS	22753	22932	.	-	0	ID=cds-WP_000494942.1;Parent=gene-C9F00_RS06530;Dbxref=GenBank:WP_000494942.1;Name=WP_000494942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9F00_RS06530;product=hypothetical protein;protein_id=WP_000494942.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	23011	23538	.	-	.	ID=gene-C9F00_RS06535;Name=C9F00_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06535;old_locus_tag=C9F00_06660
NZ_PYKC01000040.1	Protein Homology	CDS	23011	23538	.	-	0	ID=cds-WP_000022011.1;Parent=gene-C9F00_RS06535;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9F00_RS06535;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	23548	23847	.	-	.	ID=gene-C9F00_RS06540;Name=C9F00_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06540;old_locus_tag=C9F00_06665
NZ_PYKC01000040.1	Protein Homology	CDS	23548	23847	.	-	0	ID=cds-WP_000137432.1;Parent=gene-C9F00_RS06540;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9F00_RS06540;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	24030	24188	.	+	.	ID=gene-C9F00_RS06545;Name=C9F00_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06545;old_locus_tag=C9F00_06670
NZ_PYKC01000040.1	Protein Homology	CDS	24030	24188	.	+	0	ID=cds-WP_000508175.1;Parent=gene-C9F00_RS06545;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9F00_RS06545;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	24288	24737	.	+	.	ID=gene-C9F00_RS06555;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9F00_RS06555;old_locus_tag=C9F00_06680
NZ_PYKC01000040.1	Protein Homology	CDS	24288	24737	.	+	0	ID=cds-WP_000522406.1;Parent=gene-C9F00_RS06555;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9F00_RS06555;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	24759	25436	.	-	.	ID=gene-C9F00_RS06560;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9F00_RS06560;old_locus_tag=C9F00_06685
NZ_PYKC01000040.1	Protein Homology	CDS	24759	25436	.	-	0	ID=cds-WP_000126152.1;Parent=gene-C9F00_RS06560;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9F00_RS06560;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	gene	25478	26878	.	-	.	ID=gene-C9F00_RS06565;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9F00_RS06565;old_locus_tag=C9F00_06690
NZ_PYKC01000040.1	Protein Homology	CDS	25478	26878	.	-	0	ID=cds-WP_000531282.1;Parent=gene-C9F00_RS06565;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9F00_RS06565;product=GABA permease;protein_id=WP_000531282.1;transl_table=11
NZ_PYKC01000040.1	RefSeq	pseudogene	27008	27215	.	-	.	ID=gene-C9F00_RS06570;Name=C9F00_RS06570;end_range=27215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06570;old_locus_tag=C9F00_06695;partial=true;pseudo=true
NZ_PYKC01000040.1	Protein Homology	CDS	27008	27215	.	-	1	ID=cds-C9F00_RS06570;Parent=gene-C9F00_RS06570;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=27215,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9F00_RS06570;partial=true;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000021.1 1 26227
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000021.1	RefSeq	region	1	26227	.	+	.	ID=NZ_PYKC01000021.1:1..26227;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000021.1	RefSeq	gene	249	803	.	+	.	ID=gene-C9F00_RS04060;Name=C9F00_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04060;old_locus_tag=C9F00_04115
NZ_PYKC01000021.1	Protein Homology	CDS	249	803	.	+	0	ID=cds-WP_061380289.1;Parent=gene-C9F00_RS04060;Dbxref=GenBank:WP_061380289.1;Name=WP_061380289.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9F00_RS04060;product=gamma carbonic anhydrase family protein;protein_id=WP_061380289.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	779	1036	.	-	.	ID=gene-C9F00_RS04065;Name=C9F00_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04065;old_locus_tag=C9F00_04120
NZ_PYKC01000021.1	Protein Homology	CDS	779	1036	.	-	0	ID=cds-WP_001070576.1;Parent=gene-C9F00_RS04065;Dbxref=GenBank:WP_001070576.1;Name=WP_001070576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9F00_RS04065;product=DUF1488 domain-containing protein;protein_id=WP_001070576.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	1033	1851	.	-	.	ID=gene-C9F00_RS04070;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9F00_RS04070;old_locus_tag=C9F00_04125
NZ_PYKC01000021.1	Protein Homology	CDS	1033	1851	.	-	0	ID=cds-WP_000451205.1;Parent=gene-C9F00_RS04070;Dbxref=GenBank:WP_000451205.1;Name=WP_000451205.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9F00_RS04070;product=shikimate dehydrogenase;protein_id=WP_000451205.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	1856	2428	.	-	.	ID=gene-C9F00_RS04075;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9F00_RS04075;old_locus_tag=C9F00_04130
NZ_PYKC01000021.1	Protein Homology	CDS	1856	2428	.	-	0	ID=cds-WP_135369085.1;Parent=gene-C9F00_RS04075;Dbxref=GenBank:WP_135369085.1;Name=WP_135369085.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9F00_RS04075;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_135369085.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	2433	2975	.	-	.	ID=gene-C9F00_RS04080;Name=C9F00_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04080;old_locus_tag=C9F00_04135
NZ_PYKC01000021.1	Protein Homology	CDS	2433	2975	.	-	0	ID=cds-WP_135369086.1;Parent=gene-C9F00_RS04080;Dbxref=GenBank:WP_135369086.1;Name=WP_135369086.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9F00_RS04080;product=DNA topoisomerase family protein;protein_id=WP_135369086.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	3002	3475	.	-	.	ID=gene-C9F00_RS04085;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9F00_RS04085;old_locus_tag=C9F00_04140
NZ_PYKC01000021.1	Protein Homology	CDS	3002	3475	.	-	0	ID=cds-WP_000460663.1;Parent=gene-C9F00_RS04085;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9F00_RS04085;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	3447	4571	.	-	.	ID=gene-C9F00_RS04090;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9F00_RS04090;old_locus_tag=C9F00_04145
NZ_PYKC01000021.1	Protein Homology	CDS	3447	4571	.	-	0	ID=cds-WP_135369087.1;Parent=gene-C9F00_RS04090;Dbxref=GenBank:WP_135369087.1;Name=WP_135369087.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9F00_RS04090;product=DNA-protecting protein DprA;protein_id=WP_135369087.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	4703	5212	.	+	.	ID=gene-C9F00_RS04095;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9F00_RS04095;old_locus_tag=C9F00_04150
NZ_PYKC01000021.1	Protein Homology	CDS	4703	5212	.	+	0	ID=cds-WP_000114987.1;Parent=gene-C9F00_RS04095;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9F00_RS04095;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	5228	6175	.	+	.	ID=gene-C9F00_RS04100;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9F00_RS04100;old_locus_tag=C9F00_04155
NZ_PYKC01000021.1	Protein Homology	CDS	5228	6175	.	+	0	ID=cds-WP_135369088.1;Parent=gene-C9F00_RS04100;Dbxref=GenBank:WP_135369088.1;Name=WP_135369088.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9F00_RS04100;product=methionyl-tRNA formyltransferase;protein_id=WP_135369088.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	6227	7516	.	+	.	ID=gene-C9F00_RS04105;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9F00_RS04105;old_locus_tag=C9F00_04160
NZ_PYKC01000021.1	Protein Homology	CDS	6227	7516	.	+	0	ID=cds-WP_135369089.1;Parent=gene-C9F00_RS04105;Dbxref=GenBank:WP_135369089.1;Name=WP_135369089.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9F00_RS04105;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_135369089.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	7538	8914	.	+	.	ID=gene-C9F00_RS04110;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9F00_RS04110;old_locus_tag=C9F00_04165
NZ_PYKC01000021.1	Protein Homology	CDS	7538	8914	.	+	0	ID=cds-WP_000691374.1;Parent=gene-C9F00_RS04110;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9F00_RS04110;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	9056	9469	.	+	.	ID=gene-C9F00_RS04115;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9F00_RS04115;old_locus_tag=C9F00_04170
NZ_PYKC01000021.1	Protein Homology	CDS	9056	9469	.	+	0	ID=cds-WP_000008119.1;Parent=gene-C9F00_RS04115;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9F00_RS04115;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	pseudogene	9471	9674	.	-	.	ID=gene-C9F00_RS04120;Name=C9F00_RS04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS04120;old_locus_tag=C9F00_04175;partial=true;pseudo=true;start_range=.,9471
NZ_PYKC01000021.1	Protein Homology	CDS	9471	9674	.	-	0	ID=cds-C9F00_RS04120;Parent=gene-C9F00_RS04120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=C9F00_RS04120;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9471;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	9732	10157	.	-	.	ID=gene-C9F00_RS04125;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9F00_RS04125;old_locus_tag=C9F00_04180
NZ_PYKC01000021.1	Protein Homology	CDS	9732	10157	.	-	0	ID=cds-WP_000285585.1;Parent=gene-C9F00_RS04125;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9F00_RS04125;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	10168	10536	.	-	.	ID=gene-C9F00_RS04130;Name=C9F00_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04130;old_locus_tag=C9F00_04185
NZ_PYKC01000021.1	Protein Homology	CDS	10168	10536	.	-	0	ID=cds-WP_000266515.1;Parent=gene-C9F00_RS04130;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9F00_RS04130;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	10644	11027	.	-	.	ID=gene-C9F00_RS04135;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9F00_RS04135;old_locus_tag=C9F00_04190
NZ_PYKC01000021.1	Protein Homology	CDS	10644	11027	.	-	0	ID=cds-WP_001216370.1;Parent=gene-C9F00_RS04135;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9F00_RS04135;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	11068	12057	.	-	.	ID=gene-C9F00_RS04140;Name=C9F00_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04140;old_locus_tag=C9F00_04195
NZ_PYKC01000021.1	Protein Homology	CDS	11068	12057	.	-	0	ID=cds-WP_001162094.1;Parent=gene-C9F00_RS04140;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9F00_RS04140;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	12083	12703	.	-	.	ID=gene-C9F00_RS04145;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9F00_RS04145;old_locus_tag=C9F00_04200
NZ_PYKC01000021.1	Protein Homology	CDS	12083	12703	.	-	0	ID=cds-WP_000135226.1;Parent=gene-C9F00_RS04145;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9F00_RS04145;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	12737	13126	.	-	.	ID=gene-C9F00_RS04150;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9F00_RS04150;old_locus_tag=C9F00_04205
NZ_PYKC01000021.1	Protein Homology	CDS	12737	13126	.	-	0	ID=cds-WP_001029758.1;Parent=gene-C9F00_RS04150;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9F00_RS04150;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	13143	13499	.	-	.	ID=gene-C9F00_RS04155;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9F00_RS04155;old_locus_tag=C9F00_04210
NZ_PYKC01000021.1	Protein Homology	CDS	13143	13499	.	-	0	ID=cds-WP_000090780.1;Parent=gene-C9F00_RS04155;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9F00_RS04155;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	13646	13762	.	-	.	ID=gene-C9F00_RS04160;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9F00_RS04160;old_locus_tag=C9F00_04215
NZ_PYKC01000021.1	Protein Homology	CDS	13646	13762	.	-	0	ID=cds-WP_000868187.1;Parent=gene-C9F00_RS04160;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9F00_RS04160;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	13794	15125	.	-	.	ID=gene-C9F00_RS04165;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9F00_RS04165;old_locus_tag=C9F00_04220
NZ_PYKC01000021.1	Protein Homology	CDS	13794	15125	.	-	0	ID=cds-WP_001118864.1;Parent=gene-C9F00_RS04165;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9F00_RS04165;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	15133	15567	.	-	.	ID=gene-C9F00_RS04170;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9F00_RS04170;old_locus_tag=C9F00_04225
NZ_PYKC01000021.1	Protein Homology	CDS	15133	15567	.	-	0	ID=cds-WP_001238917.1;Parent=gene-C9F00_RS04170;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9F00_RS04170;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	15571	15750	.	-	.	ID=gene-C9F00_RS04175;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9F00_RS04175;old_locus_tag=C9F00_04230
NZ_PYKC01000021.1	Protein Homology	CDS	15571	15750	.	-	0	ID=cds-WP_001140434.1;Parent=gene-C9F00_RS04175;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9F00_RS04175;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	15754	16257	.	-	.	ID=gene-C9F00_RS04180;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9F00_RS04180;old_locus_tag=C9F00_04235
NZ_PYKC01000021.1	Protein Homology	CDS	15754	16257	.	-	0	ID=cds-WP_000940121.1;Parent=gene-C9F00_RS04180;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9F00_RS04180;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	16272	16625	.	-	.	ID=gene-C9F00_RS04185;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9F00_RS04185;old_locus_tag=C9F00_04240
NZ_PYKC01000021.1	Protein Homology	CDS	16272	16625	.	-	0	ID=cds-WP_000358956.1;Parent=gene-C9F00_RS04185;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9F00_RS04185;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	16635	17168	.	-	.	ID=gene-C9F00_RS04190;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9F00_RS04190;old_locus_tag=C9F00_04245
NZ_PYKC01000021.1	Protein Homology	CDS	16635	17168	.	-	0	ID=cds-WP_000091939.1;Parent=gene-C9F00_RS04190;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9F00_RS04190;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	17181	17573	.	-	.	ID=gene-C9F00_RS04195;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9F00_RS04195;old_locus_tag=C9F00_04250
NZ_PYKC01000021.1	Protein Homology	CDS	17181	17573	.	-	0	ID=cds-WP_000062611.1;Parent=gene-C9F00_RS04195;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9F00_RS04195;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	17607	17912	.	-	.	ID=gene-C9F00_RS04200;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9F00_RS04200;old_locus_tag=C9F00_04255
NZ_PYKC01000021.1	Protein Homology	CDS	17607	17912	.	-	0	ID=cds-WP_001118932.1;Parent=gene-C9F00_RS04200;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9F00_RS04200;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	17927	18466	.	-	.	ID=gene-C9F00_RS04205;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9F00_RS04205;old_locus_tag=C9F00_04260
NZ_PYKC01000021.1	Protein Homology	CDS	17927	18466	.	-	0	ID=cds-WP_001096206.1;Parent=gene-C9F00_RS04205;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9F00_RS04205;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	18481	18795	.	-	.	ID=gene-C9F00_RS04210;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9F00_RS04210;old_locus_tag=C9F00_04265
NZ_PYKC01000021.1	Protein Homology	CDS	18481	18795	.	-	0	ID=cds-WP_000729185.1;Parent=gene-C9F00_RS04210;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9F00_RS04210;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	18806	19177	.	-	.	ID=gene-C9F00_RS04215;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9F00_RS04215;old_locus_tag=C9F00_04270
NZ_PYKC01000021.1	Protein Homology	CDS	18806	19177	.	-	0	ID=cds-WP_000613954.1;Parent=gene-C9F00_RS04215;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9F00_RS04215;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	19341	19595	.	-	.	ID=gene-C9F00_RS04220;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9F00_RS04220;old_locus_tag=C9F00_04275
NZ_PYKC01000021.1	Protein Homology	CDS	19341	19595	.	-	0	ID=cds-WP_000130101.1;Parent=gene-C9F00_RS04220;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9F00_RS04220;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	19595	19786	.	-	.	ID=gene-C9F00_RS04225;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9F00_RS04225;old_locus_tag=C9F00_04280
NZ_PYKC01000021.1	Protein Homology	CDS	19595	19786	.	-	0	ID=cds-WP_000644742.1;Parent=gene-C9F00_RS04225;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9F00_RS04225;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	19786	20196	.	-	.	ID=gene-C9F00_RS04230;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9F00_RS04230;old_locus_tag=C9F00_04285
NZ_PYKC01000021.1	Protein Homology	CDS	19786	20196	.	-	0	ID=cds-WP_000941208.1;Parent=gene-C9F00_RS04230;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9F00_RS04230;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	20209	20910	.	-	.	ID=gene-C9F00_RS04235;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9F00_RS04235;old_locus_tag=C9F00_04290
NZ_PYKC01000021.1	Protein Homology	CDS	20209	20910	.	-	0	ID=cds-WP_000529945.1;Parent=gene-C9F00_RS04235;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9F00_RS04235;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	20928	21260	.	-	.	ID=gene-C9F00_RS04240;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9F00_RS04240;old_locus_tag=C9F00_04295
NZ_PYKC01000021.1	Protein Homology	CDS	20928	21260	.	-	0	ID=cds-WP_000447529.1;Parent=gene-C9F00_RS04240;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9F00_RS04240;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	21275	21553	.	-	.	ID=gene-C9F00_RS04245;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9F00_RS04245;old_locus_tag=C9F00_04300
NZ_PYKC01000021.1	Protein Homology	CDS	21275	21553	.	-	0	ID=cds-WP_001138115.1;Parent=gene-C9F00_RS04245;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9F00_RS04245;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	21570	22391	.	-	.	ID=gene-C9F00_RS04250;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9F00_RS04250;old_locus_tag=C9F00_04305
NZ_PYKC01000021.1	Protein Homology	CDS	21570	22391	.	-	0	ID=cds-WP_000301869.1;Parent=gene-C9F00_RS04250;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9F00_RS04250;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	22409	22711	.	-	.	ID=gene-C9F00_RS04255;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9F00_RS04255;old_locus_tag=C9F00_04310
NZ_PYKC01000021.1	Protein Homology	CDS	22409	22711	.	-	0	ID=cds-WP_000617546.1;Parent=gene-C9F00_RS04255;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9F00_RS04255;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	22708	23313	.	-	.	ID=gene-C9F00_RS04260;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9F00_RS04260;old_locus_tag=C9F00_04315
NZ_PYKC01000021.1	Protein Homology	CDS	22708	23313	.	-	0	ID=cds-WP_000424395.1;Parent=gene-C9F00_RS04260;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9F00_RS04260;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	23324	23953	.	-	.	ID=gene-C9F00_RS04265;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=C9F00_RS04265;old_locus_tag=C9F00_04320
NZ_PYKC01000021.1	Protein Homology	CDS	23324	23953	.	-	0	ID=cds-WP_000579838.1;Parent=gene-C9F00_RS04265;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9F00_RS04265;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	23986	24297	.	-	.	ID=gene-C9F00_RS04270;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9F00_RS04270;old_locus_tag=C9F00_04325
NZ_PYKC01000021.1	Protein Homology	CDS	23986	24297	.	-	0	ID=cds-WP_001181005.1;Parent=gene-C9F00_RS04270;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9F00_RS04270;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	24677	25144	.	+	.	ID=gene-C9F00_RS04275;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9F00_RS04275;old_locus_tag=C9F00_04335
NZ_PYKC01000021.1	Protein Homology	CDS	24677	25144	.	+	0	ID=cds-WP_135369090.1;Parent=gene-C9F00_RS04275;Dbxref=GenBank:WP_135369090.1;Name=WP_135369090.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9F00_RS04275;product=prepilin peptidase;protein_id=WP_135369090.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	25141	25617	.	-	.	ID=gene-C9F00_RS04280;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9F00_RS04280;old_locus_tag=C9F00_04340
NZ_PYKC01000021.1	Protein Homology	CDS	25141	25617	.	-	0	ID=cds-WP_000675530.1;Parent=gene-C9F00_RS04280;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9F00_RS04280;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	gene	25690	25884	.	-	.	ID=gene-C9F00_RS04285;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9F00_RS04285;old_locus_tag=C9F00_04345
NZ_PYKC01000021.1	Protein Homology	CDS	25690	25884	.	-	0	ID=cds-WP_000289082.1;Parent=gene-C9F00_RS04285;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9F00_RS04285;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11
NZ_PYKC01000021.1	RefSeq	pseudogene	26069	26227	.	-	.	ID=gene-C9F00_RS04290;Name=tuf;end_range=26227,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=C9F00_RS04290;old_locus_tag=C9F00_04360;partial=true;pseudo=true
NZ_PYKC01000021.1	Protein Homology	CDS	26069	26227	.	-	0	ID=cds-C9F00_RS04290;Parent=gene-C9F00_RS04290;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26227,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F00_RS04290;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000093.1 1 26113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000093.1	RefSeq	region	1	26113	.	+	.	ID=NZ_PYKC01000093.1:1..26113;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000093.1	RefSeq	pseudogene	52	1941	.	-	.	ID=gene-C9F00_RS15075;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=pseudogene;locus_tag=C9F00_RS15075;old_locus_tag=C9F00_15425;partial=true;pseudo=true;start_range=.,52
NZ_PYKC01000093.1	Protein Homology	CDS	52	1941	.	-	0	ID=cds-C9F00_RS15075;Parent=gene-C9F00_RS15075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F00_RS15075;partial=true;product=nitrite reductase large subunit NirB;pseudo=true;start_range=.,52;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	2258	3439	.	-	.	ID=gene-C9F00_RS15080;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9F00_RS15080;old_locus_tag=C9F00_15430
NZ_PYKC01000093.1	Protein Homology	CDS	2258	3439	.	-	0	ID=cds-WP_000185211.1;Parent=gene-C9F00_RS15080;Dbxref=GenBank:WP_000185211.1;Name=WP_000185211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9F00_RS15080;product=MFS transporter TsgA;protein_id=WP_000185211.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	3716	4288	.	+	.	ID=gene-C9F00_RS15085;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9F00_RS15085;old_locus_tag=C9F00_15435
NZ_PYKC01000093.1	Protein Homology	CDS	3716	4288	.	+	0	ID=cds-WP_000920482.1;Parent=gene-C9F00_RS15085;Dbxref=GenBank:WP_000920482.1;Name=WP_000920482.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9F00_RS15085;product=peptidylprolyl isomerase A;protein_id=WP_000920482.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	4397	4564	.	+	.	ID=gene-C9F00_RS15090;Name=C9F00_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15090;old_locus_tag=C9F00_15440
NZ_PYKC01000093.1	Protein Homology	CDS	4397	4564	.	+	0	ID=cds-WP_001620545.1;Parent=gene-C9F00_RS15090;Dbxref=GenBank:WP_001620545.1;Name=WP_001620545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9F00_RS15090;product=YhfG family protein;protein_id=WP_001620545.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	4554	5156	.	+	.	ID=gene-C9F00_RS15095;Name=C9F00_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15095;old_locus_tag=C9F00_15445
NZ_PYKC01000093.1	Protein Homology	CDS	4554	5156	.	+	0	ID=cds-WP_135369145.1;Parent=gene-C9F00_RS15095;Dbxref=GenBank:WP_135369145.1;Name=WP_135369145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9F00_RS15095;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_135369145.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	5188	5751	.	+	.	ID=gene-C9F00_RS15100;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9F00_RS15100;old_locus_tag=C9F00_15450
NZ_PYKC01000093.1	Protein Homology	CDS	5188	5751	.	+	0	ID=cds-WP_000601878.1;Parent=gene-C9F00_RS15100;Dbxref=GenBank:WP_000601878.1;Name=WP_000601878.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9F00_RS15100;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601878.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	5837	7054	.	+	.	ID=gene-C9F00_RS15105;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=C9F00_RS15105;old_locus_tag=C9F00_15455
NZ_PYKC01000093.1	Protein Homology	CDS	5837	7054	.	+	0	ID=cds-WP_000190023.1;Parent=gene-C9F00_RS15105;Dbxref=GenBank:WP_000190023.1;Name=WP_000190023.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9F00_RS15105;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190023.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	7097	9184	.	-	.	ID=gene-C9F00_RS15110;Name=C9F00_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15110;old_locus_tag=C9F00_15460
NZ_PYKC01000093.1	Protein Homology	CDS	7097	9184	.	-	0	ID=cds-WP_000269311.1;Parent=gene-C9F00_RS15110;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9F00_RS15110;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	9233	9865	.	-	.	ID=gene-C9F00_RS15115;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9F00_RS15115;old_locus_tag=C9F00_15465
NZ_PYKC01000093.1	Protein Homology	CDS	9233	9865	.	-	0	ID=cds-WP_000242758.1;Parent=gene-C9F00_RS15115;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9F00_RS15115;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	10173	10577	.	+	.	ID=gene-C9F00_RS15120;Name=C9F00_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15120;old_locus_tag=C9F00_15470
NZ_PYKC01000093.1	Protein Homology	CDS	10173	10577	.	+	0	ID=cds-WP_001148919.1;Parent=gene-C9F00_RS15120;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9F00_RS15120;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	10673	11542	.	-	.	ID=gene-C9F00_RS15125;Name=C9F00_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15125;old_locus_tag=C9F00_15475
NZ_PYKC01000093.1	Protein Homology	CDS	10673	11542	.	-	0	ID=cds-WP_001274690.1;Parent=gene-C9F00_RS15125;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9F00_RS15125;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	11594	11812	.	-	.	ID=gene-C9F00_RS15130;Name=C9F00_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15130;old_locus_tag=C9F00_15480
NZ_PYKC01000093.1	Protein Homology	CDS	11594	11812	.	-	0	ID=cds-WP_000586568.1;Parent=gene-C9F00_RS15130;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9F00_RS15130;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	11809	12876	.	-	.	ID=gene-C9F00_RS15135;Name=C9F00_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15135;old_locus_tag=C9F00_15485
NZ_PYKC01000093.1	Protein Homology	CDS	11809	12876	.	-	0	ID=cds-WP_001214109.1;Parent=gene-C9F00_RS15135;Dbxref=GenBank:WP_001214109.1;Name=WP_001214109.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9F00_RS15135;product=hydrolase;protein_id=WP_001214109.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	13074	13385	.	+	.	ID=gene-C9F00_RS15140;Name=C9F00_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15140;old_locus_tag=C9F00_15490
NZ_PYKC01000093.1	Protein Homology	CDS	13074	13385	.	+	0	ID=cds-WP_000047689.1;Parent=gene-C9F00_RS15140;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9F00_RS15140;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	13387	13608	.	-	.	ID=gene-C9F00_RS15145;Name=C9F00_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15145;old_locus_tag=C9F00_15495
NZ_PYKC01000093.1	Protein Homology	CDS	13387	13608	.	-	0	ID=cds-WP_001582875.1;Parent=gene-C9F00_RS15145;Dbxref=GenBank:WP_001582875.1;Name=WP_001582875.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9F00_RS15145;product=helix-turn-helix domain-containing protein;protein_id=WP_001582875.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	13647	15554	.	-	.	ID=gene-C9F00_RS15150;Name=C9F00_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15150;old_locus_tag=C9F00_15500
NZ_PYKC01000093.1	Protein Homology	CDS	13647	15554	.	-	0	ID=cds-WP_135492372.1;Parent=gene-C9F00_RS15150;Dbxref=GenBank:WP_135492372.1;Name=WP_135492372.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9F00_RS15150;product=ABC transporter ATP-binding protein;protein_id=WP_135492372.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	15820	16371	.	+	.	ID=gene-C9F00_RS15155;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9F00_RS15155;old_locus_tag=C9F00_15505
NZ_PYKC01000093.1	Protein Homology	CDS	15820	16371	.	+	0	ID=cds-WP_000081820.1;Parent=gene-C9F00_RS15155;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9F00_RS15155;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	16371	18176	.	+	.	ID=gene-C9F00_RS15160;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9F00_RS15160;old_locus_tag=C9F00_15510
NZ_PYKC01000093.1	Protein Homology	CDS	16371	18176	.	+	0	ID=cds-WP_000398133.1;Parent=gene-C9F00_RS15160;Dbxref=GenBank:WP_000398133.1;Name=WP_000398133.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F00_RS15160;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398133.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	18187	18387	.	+	.	ID=gene-C9F00_RS15165;Name=C9F00_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15165;old_locus_tag=C9F00_15515
NZ_PYKC01000093.1	Protein Homology	CDS	18187	18387	.	+	0	ID=cds-WP_001007735.1;Parent=gene-C9F00_RS15165;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9F00_RS15165;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	18482	19072	.	+	.	ID=gene-C9F00_RS15170;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=C9F00_RS15170;old_locus_tag=C9F00_15520
NZ_PYKC01000093.1	Protein Homology	CDS	18482	19072	.	+	0	ID=cds-WP_000861341.1;Parent=gene-C9F00_RS15170;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9F00_RS15170;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	19261	19479	.	-	.	ID=gene-C9F00_RS15175;Name=C9F00_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15175;old_locus_tag=C9F00_15530
NZ_PYKC01000093.1	Protein Homology	CDS	19261	19479	.	-	0	ID=cds-WP_001152701.1;Parent=gene-C9F00_RS15175;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9F00_RS15175;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	19699	20517	.	+	.	ID=gene-C9F00_RS15180;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9F00_RS15180;old_locus_tag=C9F00_15535
NZ_PYKC01000093.1	Protein Homology	CDS	19699	20517	.	+	0	ID=cds-WP_000838222.1;Parent=gene-C9F00_RS15180;Dbxref=GenBank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9F00_RS15180;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	20794	21516	.	+	.	ID=gene-C9F00_RS15185;Name=C9F00_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15185;old_locus_tag=C9F00_15540
NZ_PYKC01000093.1	Protein Homology	CDS	20794	21516	.	+	0	ID=cds-WP_000091471.1;Parent=gene-C9F00_RS15185;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9F00_RS15185;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	21516	21902	.	+	.	ID=gene-C9F00_RS15190;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9F00_RS15190;old_locus_tag=C9F00_15545
NZ_PYKC01000093.1	Protein Homology	CDS	21516	21902	.	+	0	ID=cds-WP_001268011.1;Parent=gene-C9F00_RS15190;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9F00_RS15190;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	21902	22258	.	+	.	ID=gene-C9F00_RS15195;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9F00_RS15195;old_locus_tag=C9F00_15550
NZ_PYKC01000093.1	Protein Homology	CDS	21902	22258	.	+	0	ID=cds-WP_023250746.1;Parent=gene-C9F00_RS15195;Dbxref=GenBank:WP_023250746.1;Name=WP_023250746.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9F00_RS15195;product=sulfurtransferase complex subunit TusC;protein_id=WP_023250746.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	22266	22553	.	+	.	ID=gene-C9F00_RS15200;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9F00_RS15200;old_locus_tag=C9F00_15555
NZ_PYKC01000093.1	Protein Homology	CDS	22266	22553	.	+	0	ID=cds-WP_000903398.1;Parent=gene-C9F00_RS15200;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9F00_RS15200;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	22679	23053	.	+	.	ID=gene-C9F00_RS15205;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9F00_RS15205;old_locus_tag=C9F00_15560
NZ_PYKC01000093.1	Protein Homology	CDS	22679	23053	.	+	0	ID=cds-WP_000246815.1;Parent=gene-C9F00_RS15205;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9F00_RS15205;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	23149	23619	.	+	.	ID=gene-C9F00_RS15210;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9F00_RS15210;old_locus_tag=C9F00_15565
NZ_PYKC01000093.1	Protein Homology	CDS	23149	23619	.	+	0	ID=cds-WP_001138043.1;Parent=gene-C9F00_RS15210;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9F00_RS15210;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	23716	25830	.	+	.	ID=gene-C9F00_RS15215;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9F00_RS15215;old_locus_tag=C9F00_15570
NZ_PYKC01000093.1	Protein Homology	CDS	23716	25830	.	+	0	ID=cds-WP_000124693.1;Parent=gene-C9F00_RS15215;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9F00_RS15215;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11
NZ_PYKC01000093.1	RefSeq	gene	25902	26113	.	+	.	ID=gene-C9F00_RS15220;Name=C9F00_RS15220;end_range=26113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15220;old_locus_tag=C9F00_15575;partial=true
NZ_PYKC01000093.1	Protein Homology	CDS	25902	26113	.	+	0	ID=cds-WP_000031661.1-2;Parent=gene-C9F00_RS15220;Dbxref=GenBank:WP_000031661.1;Name=WP_000031661.1;Ontology_term=GO:0003924,GO:0005525;end_range=26113,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F00_RS15220;partial=true;product=GTP-binding protein;protein_id=WP_000031661.1;transl_table=11
##sequence-region NZ_PYKC01000042.1 1 25738
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000042.1	RefSeq	region	1	25738	.	+	.	ID=NZ_PYKC01000042.1:1..25738;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000042.1	RefSeq	pseudogene	59	673	.	+	.	ID=gene-C9F00_RS06660;Name=C9F00_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06660;old_locus_tag=C9F00_06785;partial=true;pseudo=true;start_range=.,59
NZ_PYKC01000042.1	Protein Homology	CDS	59	673	.	+	0	ID=cds-C9F00_RS06660;Parent=gene-C9F00_RS06660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835770.1;locus_tag=C9F00_RS06660;partial=true;product=glycerate kinase;pseudo=true;start_range=.,59;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	753	1538	.	-	.	ID=gene-C9F00_RS06665;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=C9F00_RS06665;old_locus_tag=C9F00_06790
NZ_PYKC01000042.1	Protein Homology	CDS	753	1538	.	-	0	ID=cds-WP_000540985.1;Parent=gene-C9F00_RS06665;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=C9F00_RS06665;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	1549	2784	.	-	.	ID=gene-C9F00_RS06670;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=C9F00_RS06670;old_locus_tag=C9F00_06795
NZ_PYKC01000042.1	Protein Homology	CDS	1549	2784	.	-	0	ID=cds-WP_000589759.1;Parent=gene-C9F00_RS06670;Dbxref=GenBank:WP_000589759.1;Name=WP_000589759.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9F00_RS06670;product=allantoate deiminase;protein_id=WP_000589759.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	2806	3855	.	-	.	ID=gene-C9F00_RS06675;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=C9F00_RS06675;old_locus_tag=C9F00_06800
NZ_PYKC01000042.1	Protein Homology	CDS	2806	3855	.	-	0	ID=cds-WP_023250795.1;Parent=gene-C9F00_RS06675;Dbxref=GenBank:WP_023250795.1;Name=WP_023250795.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=C9F00_RS06675;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_023250795.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	4171	5835	.	+	.	ID=gene-C9F00_RS06680;Name=C9F00_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06680;old_locus_tag=C9F00_06805
NZ_PYKC01000042.1	Protein Homology	CDS	4171	5835	.	+	0	ID=cds-WP_079942828.1;Parent=gene-C9F00_RS06680;Dbxref=GenBank:WP_079942828.1;Name=WP_079942828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9F00_RS06680;product=acyl-CoA synthetase FdrA;protein_id=WP_079942828.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	5845	7104	.	+	.	ID=gene-C9F00_RS06685;Name=C9F00_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06685;old_locus_tag=C9F00_06810
NZ_PYKC01000042.1	Protein Homology	CDS	5845	7104	.	+	0	ID=cds-WP_000495330.1;Parent=gene-C9F00_RS06685;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9F00_RS06685;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	7116	7925	.	+	.	ID=gene-C9F00_RS06690;Name=C9F00_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06690;old_locus_tag=C9F00_06815
NZ_PYKC01000042.1	Protein Homology	CDS	7116	7925	.	+	0	ID=cds-WP_135369527.1;Parent=gene-C9F00_RS06690;Dbxref=GenBank:WP_135369527.1;Name=WP_135369527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9F00_RS06690;product=DUF2877 domain-containing protein;protein_id=WP_135369527.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	7929	8822	.	+	.	ID=gene-C9F00_RS06695;Name=C9F00_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06695;old_locus_tag=C9F00_06820
NZ_PYKC01000042.1	Protein Homology	CDS	7929	8822	.	+	0	ID=cds-WP_000855344.1;Parent=gene-C9F00_RS06695;Dbxref=GenBank:WP_000855344.1;Name=WP_000855344.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9F00_RS06695;product=carbamate kinase;protein_id=WP_000855344.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	8863	9930	.	-	.	ID=gene-C9F00_RS06700;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9F00_RS06700;old_locus_tag=C9F00_06825
NZ_PYKC01000042.1	Protein Homology	CDS	8863	9930	.	-	0	ID=cds-WP_000815599.1;Parent=gene-C9F00_RS06700;Dbxref=GenBank:WP_000815599.1;Name=WP_000815599.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9F00_RS06700;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815599.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	9927	10436	.	-	.	ID=gene-C9F00_RS06705;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9F00_RS06705;old_locus_tag=C9F00_06830
NZ_PYKC01000042.1	Protein Homology	CDS	9927	10436	.	-	0	ID=cds-WP_000098736.1;Parent=gene-C9F00_RS06705;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9F00_RS06705;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	10554	11276	.	-	.	ID=gene-C9F00_RS06710;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9F00_RS06710;old_locus_tag=C9F00_06840
NZ_PYKC01000042.1	Protein Homology	CDS	10554	11276	.	-	0	ID=cds-WP_000212284.1;Parent=gene-C9F00_RS06710;Dbxref=GenBank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9F00_RS06710;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	11279	11773	.	-	.	ID=gene-C9F00_RS06715;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9F00_RS06715;old_locus_tag=C9F00_06845
NZ_PYKC01000042.1	Protein Homology	CDS	11279	11773	.	-	0	ID=cds-WP_000255991.1;Parent=gene-C9F00_RS06715;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9F00_RS06715;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	11946	13331	.	+	.	ID=gene-C9F00_RS06720;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9F00_RS06720;old_locus_tag=C9F00_06850
NZ_PYKC01000042.1	Protein Homology	CDS	11946	13331	.	+	0	ID=cds-WP_000912376.1;Parent=gene-C9F00_RS06720;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9F00_RS06720;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	13422	13970	.	-	.	ID=gene-C9F00_RS06725;Name=C9F00_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06725;old_locus_tag=C9F00_06855
NZ_PYKC01000042.1	Protein Homology	CDS	13422	13970	.	-	0	ID=cds-WP_134938315.1;Parent=gene-C9F00_RS06725;Dbxref=GenBank:WP_134938315.1;Name=WP_134938315.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=C9F00_RS06725;product=metal-dependent hydrolase;protein_id=WP_134938315.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	14097	14309	.	-	.	ID=gene-C9F00_RS06730;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9F00_RS06730;old_locus_tag=C9F00_06860
NZ_PYKC01000042.1	Protein Homology	CDS	14097	14309	.	-	0	ID=cds-WP_000190278.1;Parent=gene-C9F00_RS06730;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9F00_RS06730;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	14311	15177	.	-	.	ID=gene-C9F00_RS06735;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9F00_RS06735;old_locus_tag=C9F00_06865
NZ_PYKC01000042.1	Protein Homology	CDS	14311	15177	.	-	0	ID=cds-WP_000729165.1;Parent=gene-C9F00_RS06735;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9F00_RS06735;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	15724	16281	.	+	.	ID=gene-C9F00_RS06745;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9F00_RS06745;old_locus_tag=C9F00_06875
NZ_PYKC01000042.1	Protein Homology	CDS	15724	16281	.	+	0	ID=cds-WP_080222818.1;Parent=gene-C9F00_RS06745;Dbxref=GenBank:WP_080222818.1;Name=WP_080222818.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9F00_RS06745;product=type 1 fimbrial protein subunit FimA;protein_id=WP_080222818.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	16356	16889	.	+	.	ID=gene-C9F00_RS06750;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9F00_RS06750;old_locus_tag=C9F00_06880
NZ_PYKC01000042.1	Protein Homology	CDS	16356	16889	.	+	0	ID=cds-WP_080110530.1;Parent=gene-C9F00_RS06750;Dbxref=GenBank:WP_080110530.1;Name=WP_080110530.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9F00_RS06750;product=type 1 fimbrial protein subunit FimI;protein_id=WP_080110530.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	16933	17625	.	+	.	ID=gene-C9F00_RS06755;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9F00_RS06755;old_locus_tag=C9F00_06885
NZ_PYKC01000042.1	Protein Homology	CDS	16933	17625	.	+	0	ID=cds-WP_001531073.1;Parent=gene-C9F00_RS06755;Dbxref=GenBank:WP_001531073.1;Name=WP_001531073.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9F00_RS06755;product=type 1 fimbria chaperone FimC;protein_id=WP_001531073.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	17656	20268	.	+	.	ID=gene-C9F00_RS06760;Name=C9F00_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06760;old_locus_tag=C9F00_06890
NZ_PYKC01000042.1	Protein Homology	CDS	17656	20268	.	+	0	ID=cds-WP_135369529.1;Parent=gene-C9F00_RS06760;Dbxref=GenBank:WP_135369529.1;Name=WP_135369529.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F00_RS06760;product=fimbrial biogenesis usher protein;protein_id=WP_135369529.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	20283	21290	.	+	.	ID=gene-C9F00_RS06765;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9F00_RS06765;old_locus_tag=C9F00_06895
NZ_PYKC01000042.1	Protein Homology	CDS	20283	21290	.	+	0	ID=cds-WP_094963764.1;Parent=gene-C9F00_RS06765;Dbxref=GenBank:WP_094963764.1;Name=WP_094963764.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9F00_RS06765;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_094963764.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	21300	21818	.	+	.	ID=gene-C9F00_RS06770;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9F00_RS06770;old_locus_tag=C9F00_06900
NZ_PYKC01000042.1	Protein Homology	CDS	21300	21818	.	+	0	ID=cds-WP_000603405.1;Parent=gene-C9F00_RS06770;Dbxref=GenBank:WP_000603405.1;Name=WP_000603405.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9F00_RS06770;product=fimbria assembly protein;protein_id=WP_000603405.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	21864	22496	.	-	.	ID=gene-C9F00_RS06775;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9F00_RS06775;old_locus_tag=C9F00_06905
NZ_PYKC01000042.1	Protein Homology	CDS	21864	22496	.	-	0	ID=cds-WP_000801272.1;Parent=gene-C9F00_RS06775;Dbxref=GenBank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9F00_RS06775;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	23100	23822	.	-	.	ID=gene-C9F00_RS06780;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9F00_RS06780;old_locus_tag=C9F00_06910
NZ_PYKC01000042.1	Protein Homology	CDS	23100	23822	.	-	0	ID=cds-WP_135369164.1;Parent=gene-C9F00_RS06780;Dbxref=GenBank:WP_135369164.1;Name=WP_135369164.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9F00_RS06780;product=fimbria biosynthesis regulator FimY;protein_id=WP_135369164.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	23841	24152	.	-	.	ID=gene-C9F00_RS06785;Name=C9F00_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06785;old_locus_tag=C9F00_06915
NZ_PYKC01000042.1	Protein Homology	CDS	23841	24152	.	-	0	ID=cds-WP_000226501.1;Parent=gene-C9F00_RS06785;Dbxref=GenBank:WP_000226501.1;Name=WP_000226501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9F00_RS06785;product=hypothetical protein;protein_id=WP_000226501.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	24314	24910	.	-	.	ID=gene-C9F00_RS06790;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9F00_RS06790;old_locus_tag=C9F00_06920
NZ_PYKC01000042.1	Protein Homology	CDS	24314	24910	.	-	0	ID=cds-WP_000948629.1;Parent=gene-C9F00_RS06790;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9F00_RS06790;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11
NZ_PYKC01000042.1	RefSeq	gene	25165	25241	.	+	.	ID=gene-C9F00_RS06800;Name=C9F00_RS06800;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06800;old_locus_tag=C9F00_06930
NZ_PYKC01000042.1	tRNAscan-SE	tRNA	25165	25241	.	+	.	ID=rna-C9F00_RS06800;Parent=gene-C9F00_RS06800;anticodon=(pos:25199..25201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06800;product=tRNA-Arg
NZ_PYKC01000042.1	tRNAscan-SE	exon	25165	25241	.	+	.	ID=exon-C9F00_RS06800-1;Parent=rna-C9F00_RS06800;anticodon=(pos:25199..25201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06800;product=tRNA-Arg
NZ_PYKC01000042.1	RefSeq	pseudogene	25268	25366	.	-	.	ID=gene-C9F00_RS24375;Name=C9F00_RS24375;end_range=25366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24375;partial=true;pseudo=true
NZ_PYKC01000042.1	Protein Homology	CDS	25268	25366	.	-	0	ID=cds-C9F00_RS24375;Parent=gene-C9F00_RS24375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=25366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=C9F00_RS24375;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000042.1	RefSeq	pseudogene	25335	25738	.	-	.	ID=gene-C9F00_RS06805;Name=C9F00_RS06805;end_range=25738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06805;old_locus_tag=C9F00_06935;partial=true;pseudo=true
NZ_PYKC01000042.1	Protein Homology	CDS	25335	25738	.	-	1	ID=cds-C9F00_RS06805;Parent=gene-C9F00_RS06805;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;end_range=25738,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=C9F00_RS06805;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000081.1 1 25501
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000081.1	RefSeq	region	1	25501	.	+	.	ID=NZ_PYKC01000081.1:1..25501;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000081.1	RefSeq	gene	234	716	.	-	.	ID=gene-C9F00_RS13515;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9F00_RS13515;old_locus_tag=C9F00_13850
NZ_PYKC01000081.1	Protein Homology	CDS	234	716	.	-	0	ID=cds-WP_001518569.1;Parent=gene-C9F00_RS13515;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9F00_RS13515;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	905	1342	.	+	.	ID=gene-C9F00_RS13520;Name=C9F00_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13520;old_locus_tag=C9F00_13855
NZ_PYKC01000081.1	Protein Homology	CDS	905	1342	.	+	0	ID=cds-WP_001537508.1;Parent=gene-C9F00_RS13520;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9F00_RS13520;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	1332	1622	.	+	.	ID=gene-C9F00_RS13525;Name=C9F00_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13525;old_locus_tag=C9F00_13860
NZ_PYKC01000081.1	Protein Homology	CDS	1332	1622	.	+	0	ID=cds-WP_001112990.1;Parent=gene-C9F00_RS13525;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9F00_RS13525;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	1788	2126	.	-	.	ID=gene-C9F00_RS13530;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9F00_RS13530;old_locus_tag=C9F00_13865
NZ_PYKC01000081.1	Protein Homology	CDS	1788	2126	.	-	0	ID=cds-WP_001203445.1;Parent=gene-C9F00_RS13530;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9F00_RS13530;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	2275	3936	.	-	.	ID=gene-C9F00_RS13535;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9F00_RS13535;old_locus_tag=C9F00_13870
NZ_PYKC01000081.1	Protein Homology	CDS	2275	3936	.	-	0	ID=cds-WP_000880965.1;Parent=gene-C9F00_RS13535;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9F00_RS13535;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	4022	4900	.	-	.	ID=gene-C9F00_RS13540;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9F00_RS13540;old_locus_tag=C9F00_13875
NZ_PYKC01000081.1	Protein Homology	CDS	4022	4900	.	-	0	ID=cds-WP_001059155.1;Parent=gene-C9F00_RS13540;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9F00_RS13540;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	5023	5613	.	+	.	ID=gene-C9F00_RS13550;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9F00_RS13550;old_locus_tag=C9F00_13885
NZ_PYKC01000081.1	Protein Homology	CDS	5023	5613	.	+	0	ID=cds-WP_001518875.1;Parent=gene-C9F00_RS13550;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9F00_RS13550;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	5648	6253	.	-	.	ID=gene-C9F00_RS13555;Name=C9F00_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13555;old_locus_tag=C9F00_13890
NZ_PYKC01000081.1	Protein Homology	CDS	5648	6253	.	-	0	ID=cds-WP_135369224.1;Parent=gene-C9F00_RS13555;Dbxref=GenBank:WP_135369224.1;Name=WP_135369224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9F00_RS13555;product=DUF6630 family protein;protein_id=WP_135369224.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	6374	7660	.	-	.	ID=gene-C9F00_RS13560;Name=C9F00_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13560;old_locus_tag=C9F00_13895
NZ_PYKC01000081.1	Protein Homology	CDS	6374	7660	.	-	0	ID=cds-WP_127172650.1;Parent=gene-C9F00_RS13560;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9F00_RS13560;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	7680	8471	.	-	.	ID=gene-C9F00_RS13565;Name=C9F00_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13565;old_locus_tag=C9F00_13900
NZ_PYKC01000081.1	Protein Homology	CDS	7680	8471	.	-	0	ID=cds-WP_135492341.1;Parent=gene-C9F00_RS13565;Dbxref=GenBank:WP_135492341.1;Name=WP_135492341.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9F00_RS13565;product=cytochrome C assembly family protein;protein_id=WP_135492341.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	8637	9998	.	+	.	ID=gene-C9F00_RS13575;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9F00_RS13575;old_locus_tag=C9F00_13910
NZ_PYKC01000081.1	Protein Homology	CDS	8637	9998	.	+	0	ID=cds-WP_000460052.1;Parent=gene-C9F00_RS13575;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F00_RS13575;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	10342	10590	.	+	.	ID=gene-C9F00_RS13580;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9F00_RS13580;old_locus_tag=C9F00_13915
NZ_PYKC01000081.1	Protein Homology	CDS	10342	10590	.	+	0	ID=cds-WP_000256453.1;Parent=gene-C9F00_RS13580;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9F00_RS13580;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	10609	11157	.	+	.	ID=gene-C9F00_RS13585;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9F00_RS13585;old_locus_tag=C9F00_13920
NZ_PYKC01000081.1	Protein Homology	CDS	10609	11157	.	+	0	ID=cds-WP_000043266.1;Parent=gene-C9F00_RS13585;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9F00_RS13585;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	11202	11969	.	+	.	ID=gene-C9F00_RS13590;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9F00_RS13590;old_locus_tag=C9F00_13925
NZ_PYKC01000081.1	Protein Homology	CDS	11202	11969	.	+	0	ID=cds-WP_000469804.1;Parent=gene-C9F00_RS13590;Dbxref=GenBank:WP_000469804.1;Name=WP_000469804.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9F00_RS13590;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469804.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	12010	12357	.	+	.	ID=gene-C9F00_RS13595;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9F00_RS13595;old_locus_tag=C9F00_13930
NZ_PYKC01000081.1	Protein Homology	CDS	12010	12357	.	+	0	ID=cds-WP_000065257.1;Parent=gene-C9F00_RS13595;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9F00_RS13595;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	12514	13734	.	-	.	ID=gene-C9F00_RS13600;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9F00_RS13600;old_locus_tag=C9F00_13935
NZ_PYKC01000081.1	Protein Homology	CDS	12514	13734	.	-	0	ID=cds-WP_001030985.1;Parent=gene-C9F00_RS13600;Dbxref=GenBank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9F00_RS13600;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	13727	14245	.	-	.	ID=gene-C9F00_RS13605;Name=C9F00_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13605;old_locus_tag=C9F00_13940
NZ_PYKC01000081.1	Protein Homology	CDS	13727	14245	.	-	0	ID=cds-WP_001212379.1;Parent=gene-C9F00_RS13605;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9F00_RS13605;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	14685	15755	.	+	.	ID=gene-C9F00_RS13610;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9F00_RS13610;old_locus_tag=C9F00_13945
NZ_PYKC01000081.1	Protein Homology	CDS	14685	15755	.	+	0	ID=cds-WP_135369223.1;Parent=gene-C9F00_RS13610;Dbxref=GenBank:WP_135369223.1;Name=WP_135369223.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9F00_RS13610;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_135369223.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	15765	16886	.	+	.	ID=gene-C9F00_RS13615;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9F00_RS13615;old_locus_tag=C9F00_13950
NZ_PYKC01000081.1	Protein Homology	CDS	15765	16886	.	+	0	ID=cds-WP_080151479.1;Parent=gene-C9F00_RS13615;Dbxref=GenBank:WP_080151479.1;Name=WP_080151479.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9F00_RS13615;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_080151479.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	16944	17852	.	+	.	ID=gene-C9F00_RS13620;Name=C9F00_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13620;old_locus_tag=C9F00_13955
NZ_PYKC01000081.1	Protein Homology	CDS	16944	17852	.	+	0	ID=cds-WP_000210993.1;Parent=gene-C9F00_RS13620;Dbxref=GenBank:WP_000210993.1;Name=WP_000210993.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9F00_RS13620;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210993.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	17813	18973	.	-	.	ID=gene-C9F00_RS13625;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9F00_RS13625;old_locus_tag=C9F00_13960
NZ_PYKC01000081.1	Protein Homology	CDS	17813	18973	.	-	0	ID=cds-WP_000200080.1;Parent=gene-C9F00_RS13625;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9F00_RS13625;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11
NZ_PYKC01000081.1	cmsearch	sequence_feature	18996	19121	.	-	.	ID=id-NZ_PYKC01000081.1:18996..19121;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKC01000081.1	RefSeq	gene	19073	19120	.	-	.	ID=gene-C9F00_RS13630;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9F00_RS13630;old_locus_tag=C9F00_13965
NZ_PYKC01000081.1	Protein Homology	CDS	19073	19120	.	-	0	ID=cds-WP_010989056.1;Parent=gene-C9F00_RS13630;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9F00_RS13630;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	19224	19562	.	-	.	ID=gene-C9F00_RS13635;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9F00_RS13635;old_locus_tag=C9F00_13970
NZ_PYKC01000081.1	Protein Homology	CDS	19224	19562	.	-	0	ID=cds-WP_000178449.1;Parent=gene-C9F00_RS13635;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9F00_RS13635;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	19834	20571	.	-	.	ID=gene-C9F00_RS13645;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9F00_RS13645;old_locus_tag=C9F00_13975
NZ_PYKC01000081.1	Protein Homology	CDS	19834	20571	.	-	0	ID=cds-WP_000197660.1;Parent=gene-C9F00_RS13645;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9F00_RS13645;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	20703	21683	.	+	.	ID=gene-C9F00_RS13650;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9F00_RS13650;old_locus_tag=C9F00_13980
NZ_PYKC01000081.1	Protein Homology	CDS	20703	21683	.	+	0	ID=cds-WP_000079130.1;Parent=gene-C9F00_RS13650;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9F00_RS13650;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	21680	22411	.	+	.	ID=gene-C9F00_RS13655;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9F00_RS13655;old_locus_tag=C9F00_13985
NZ_PYKC01000081.1	Protein Homology	CDS	21680	22411	.	+	0	ID=cds-WP_000992634.1;Parent=gene-C9F00_RS13655;Dbxref=GenBank:WP_000992634.1;Name=WP_000992634.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9F00_RS13655;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992634.1;transl_table=11
NZ_PYKC01000081.1	RefSeq	gene	22541	25114	.	+	.	ID=gene-C9F00_RS13660;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9F00_RS13660;old_locus_tag=C9F00_13990
NZ_PYKC01000081.1	Protein Homology	CDS	22541	25114	.	+	0	ID=cds-WP_001235092.1;Parent=gene-C9F00_RS13660;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9F00_RS13660;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11
##sequence-region NZ_PYKC01000118.1 1 24338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000118.1	RefSeq	region	1	24338	.	+	.	ID=NZ_PYKC01000118.1:1..24338;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000118.1	RefSeq	gene	1	77	.	+	.	ID=gene-C9F00_RS18210;Name=C9F00_RS18210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS18210;old_locus_tag=C9F00_18655
NZ_PYKC01000118.1	tRNAscan-SE	tRNA	1	77	.	+	.	ID=rna-C9F00_RS18210;Parent=gene-C9F00_RS18210;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18210;product=tRNA-Asp
NZ_PYKC01000118.1	tRNAscan-SE	exon	1	77	.	+	.	ID=exon-C9F00_RS18210-1;Parent=rna-C9F00_RS18210;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18210;product=tRNA-Asp
NZ_PYKC01000118.1	RefSeq	gene	242	1045	.	+	.	ID=gene-C9F00_RS18215;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9F00_RS18215;old_locus_tag=C9F00_18660
NZ_PYKC01000118.1	Protein Homology	CDS	242	1045	.	+	0	ID=cds-WP_135369478.1;Parent=gene-C9F00_RS18215;Dbxref=GenBank:WP_135369478.1;Name=WP_135369478.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9F00_RS18215;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_135369478.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	1066	1980	.	-	.	ID=gene-C9F00_RS18220;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=C9F00_RS18220;old_locus_tag=C9F00_18665
NZ_PYKC01000118.1	Protein Homology	CDS	1066	1980	.	-	0	ID=cds-WP_000648534.1;Parent=gene-C9F00_RS18220;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9F00_RS18220;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	2085	3260	.	+	.	ID=gene-C9F00_RS18225;Name=C9F00_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18225;old_locus_tag=C9F00_18670
NZ_PYKC01000118.1	Protein Homology	CDS	2085	3260	.	+	0	ID=cds-WP_135369477.1;Parent=gene-C9F00_RS18225;Dbxref=GenBank:WP_135369477.1;Name=WP_135369477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9F00_RS18225;product=MFS transporter;protein_id=WP_135369477.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	3392	4192	.	+	.	ID=gene-C9F00_RS18230;Name=C9F00_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18230;old_locus_tag=C9F00_18675
NZ_PYKC01000118.1	Protein Homology	CDS	3392	4192	.	+	0	ID=cds-WP_135492430.1;Parent=gene-C9F00_RS18230;Dbxref=GenBank:WP_135492430.1;Name=WP_135492430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9F00_RS18230;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_135492430.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	4270	5040	.	+	.	ID=gene-C9F00_RS18235;Name=C9F00_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18235;old_locus_tag=C9F00_18680
NZ_PYKC01000118.1	Protein Homology	CDS	4270	5040	.	+	0	ID=cds-WP_135369476.1;Parent=gene-C9F00_RS18235;Dbxref=GenBank:WP_135369476.1;Name=WP_135369476.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9F00_RS18235;product=class I SAM-dependent methyltransferase;protein_id=WP_135369476.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	5096	6463	.	-	.	ID=gene-C9F00_RS18240;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9F00_RS18240;old_locus_tag=C9F00_18685
NZ_PYKC01000118.1	Protein Homology	CDS	5096	6463	.	-	0	ID=cds-WP_000644706.1;Parent=gene-C9F00_RS18240;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9F00_RS18240;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	6535	7290	.	-	.	ID=gene-C9F00_RS18245;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9F00_RS18245;old_locus_tag=C9F00_18690
NZ_PYKC01000118.1	Protein Homology	CDS	6535	7290	.	-	0	ID=cds-WP_001052780.1;Parent=gene-C9F00_RS18245;Dbxref=GenBank:WP_001052780.1;Name=WP_001052780.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9F00_RS18245;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052780.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	7325	8047	.	+	.	ID=gene-C9F00_RS18250;Name=C9F00_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18250;old_locus_tag=C9F00_18695
NZ_PYKC01000118.1	Protein Homology	CDS	7325	8047	.	+	0	ID=cds-WP_000801238.1;Parent=gene-C9F00_RS18250;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9F00_RS18250;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	8044	8511	.	-	.	ID=gene-C9F00_RS18255;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9F00_RS18255;old_locus_tag=C9F00_18700
NZ_PYKC01000118.1	Protein Homology	CDS	8044	8511	.	-	0	ID=cds-WP_000917872.1;Parent=gene-C9F00_RS18255;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9F00_RS18255;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	8575	9306	.	+	.	ID=gene-C9F00_RS18260;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9F00_RS18260;old_locus_tag=C9F00_18705
NZ_PYKC01000118.1	Protein Homology	CDS	8575	9306	.	+	0	ID=cds-WP_001670675.1;Parent=gene-C9F00_RS18260;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9F00_RS18260;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	9440	9516	.	+	.	ID=gene-C9F00_RS18265;Name=C9F00_RS18265;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS18265;old_locus_tag=C9F00_18710
NZ_PYKC01000118.1	tRNAscan-SE	tRNA	9440	9516	.	+	.	ID=rna-C9F00_RS18265;Parent=gene-C9F00_RS18265;anticodon=(pos:9474..9476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18265;product=tRNA-Asp
NZ_PYKC01000118.1	tRNAscan-SE	exon	9440	9516	.	+	.	ID=exon-C9F00_RS18265-1;Parent=rna-C9F00_RS18265;anticodon=(pos:9474..9476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18265;product=tRNA-Asp
NZ_PYKC01000118.1	RefSeq	gene	9837	10892	.	-	.	ID=gene-C9F00_RS18270;Name=C9F00_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18270;old_locus_tag=C9F00_18715
NZ_PYKC01000118.1	Protein Homology	CDS	9837	10892	.	-	0	ID=cds-WP_000367627.1;Parent=gene-C9F00_RS18270;Dbxref=GenBank:WP_000367627.1;Name=WP_000367627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9F00_RS18270;product=ImpA family type VI secretion system protein;protein_id=WP_000367627.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	pseudogene	10903	11897	.	-	.	ID=gene-C9F00_RS18275;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=C9F00_RS18275;old_locus_tag=C9F00_18720;pseudo=true
NZ_PYKC01000118.1	Protein Homology	CDS	10903	11897	.	-	0	ID=cds-C9F00_RS18275;Parent=gene-C9F00_RS18275;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=C9F00_RS18275;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	11894	13777	.	-	.	ID=gene-C9F00_RS18280;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=C9F00_RS18280;old_locus_tag=C9F00_18725
NZ_PYKC01000118.1	Protein Homology	CDS	11894	13777	.	-	0	ID=cds-WP_000371508.1;Parent=gene-C9F00_RS18280;Dbxref=GenBank:WP_000371508.1;Name=WP_000371508.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F00_RS18280;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371508.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	13793	14287	.	-	.	ID=gene-C9F00_RS18285;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9F00_RS18285;old_locus_tag=C9F00_18730
NZ_PYKC01000118.1	Protein Homology	CDS	13793	14287	.	-	0	ID=cds-WP_000108007.1;Parent=gene-C9F00_RS18285;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9F00_RS18285;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	14284	15108	.	-	.	ID=gene-C9F00_RS18290;Name=C9F00_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18290;old_locus_tag=C9F00_18735
NZ_PYKC01000118.1	Protein Homology	CDS	14284	15108	.	-	0	ID=cds-WP_000750535.1;Parent=gene-C9F00_RS18290;Dbxref=GenBank:WP_000750535.1;Name=WP_000750535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9F00_RS18290;product=type VI secretion system accessory protein TagJ;protein_id=WP_000750535.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	15095	15997	.	-	.	ID=gene-C9F00_RS18295;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9F00_RS18295;old_locus_tag=C9F00_18740
NZ_PYKC01000118.1	Protein Homology	CDS	15095	15997	.	-	0	ID=cds-WP_000806681.1;Parent=gene-C9F00_RS18295;Dbxref=GenBank:WP_000806681.1;Name=WP_000806681.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9F00_RS18295;product=type VI secretion system-associated protein TagK;protein_id=WP_000806681.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	16365	19004	.	+	.	ID=gene-C9F00_RS18300;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=C9F00_RS18300;old_locus_tag=C9F00_18745
NZ_PYKC01000118.1	Protein Homology	CDS	16365	19004	.	+	0	ID=cds-WP_000449779.1;Parent=gene-C9F00_RS18300;Dbxref=GenBank:WP_000449779.1;Name=WP_000449779.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9F00_RS18300;product=type VI secretion system ATPase TssH;protein_id=WP_000449779.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	19104	19646	.	+	.	ID=gene-C9F00_RS18305;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9F00_RS18305;old_locus_tag=C9F00_18750
NZ_PYKC01000118.1	Protein Homology	CDS	19104	19646	.	+	0	ID=cds-WP_000996815.1;Parent=gene-C9F00_RS18305;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9F00_RS18305;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	19670	21178	.	+	.	ID=gene-C9F00_RS18310;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9F00_RS18310;old_locus_tag=C9F00_18755
NZ_PYKC01000118.1	Protein Homology	CDS	19670	21178	.	+	0	ID=cds-WP_000013884.1;Parent=gene-C9F00_RS18310;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9F00_RS18310;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	21171	21812	.	+	.	ID=gene-C9F00_RS24725;Name=C9F00_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24725
NZ_PYKC01000118.1	Protein Homology	CDS	21171	21812	.	+	0	ID=cds-WP_346763453.1;Parent=gene-C9F00_RS24725;Dbxref=GenBank:WP_346763453.1;Name=WP_346763453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042415.1;locus_tag=C9F00_RS24725;product=STY0301 family protein;protein_id=WP_346763453.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	22066	22551	.	+	.	ID=gene-C9F00_RS18325;Name=C9F00_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18325;old_locus_tag=C9F00_18770
NZ_PYKC01000118.1	Protein Homology	CDS	22066	22551	.	+	0	ID=cds-WP_061202070.1;Parent=gene-C9F00_RS18325;Dbxref=GenBank:WP_061202070.1;Name=WP_061202070.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F00_RS18325;product=Hcp family type VI secretion system effector;protein_id=WP_061202070.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	pseudogene	22619	22812	.	+	.	ID=gene-C9F00_RS24545;Name=C9F00_RS24545;end_range=22812,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24545;partial=true;pseudo=true
NZ_PYKC01000118.1	Protein Homology	CDS	22619	22812	.	+	0	ID=cds-C9F00_RS24545;Parent=gene-C9F00_RS24545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9F00_RS24545;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	22855	23340	.	+	.	ID=gene-C9F00_RS18330;Name=C9F00_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18330;old_locus_tag=C9F00_18775
NZ_PYKC01000118.1	Protein Homology	CDS	22855	23340	.	+	0	ID=cds-WP_001081550.1;Parent=gene-C9F00_RS18330;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9F00_RS18330;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	23325	23708	.	+	.	ID=gene-C9F00_RS18335;Name=C9F00_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18335;old_locus_tag=C9F00_18780
NZ_PYKC01000118.1	Protein Homology	CDS	23325	23708	.	+	0	ID=cds-WP_000379146.1;Parent=gene-C9F00_RS18335;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9F00_RS18335;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11
NZ_PYKC01000118.1	RefSeq	gene	23851	24336	.	+	.	ID=gene-C9F00_RS18340;Name=C9F00_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18340;old_locus_tag=C9F00_18785
NZ_PYKC01000118.1	Protein Homology	CDS	23851	24336	.	+	0	ID=cds-WP_061585829.1;Parent=gene-C9F00_RS18340;Dbxref=GenBank:WP_061585829.1;Name=WP_061585829.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F00_RS18340;product=Hcp family type VI secretion system effector;protein_id=WP_061585829.1;transl_table=11
##sequence-region NZ_PYKC01000101.1 1 23956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000101.1	RefSeq	region	1	23956	.	+	.	ID=NZ_PYKC01000101.1:1..23956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000101.1	RefSeq	gene	1	1989	.	+	.	ID=gene-C9F00_RS16425;Name=C9F00_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16425;old_locus_tag=C9F00_16820;partial=true;start_range=.,1
NZ_PYKC01000101.1	Protein Homology	CDS	1	1989	.	+	0	ID=cds-WP_135492396.1;Parent=gene-C9F00_RS16425;Dbxref=GenBank:WP_135492396.1;Name=WP_135492396.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F00_RS16425;partial=true;product=PRD domain-containing protein;protein_id=WP_135492396.1;start_range=.,1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	2091	2513	.	+	.	ID=gene-C9F00_RS16430;Name=C9F00_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16430;old_locus_tag=C9F00_16825
NZ_PYKC01000101.1	Protein Homology	CDS	2091	2513	.	+	0	ID=cds-WP_000820693.1;Parent=gene-C9F00_RS16430;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9F00_RS16430;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	2528	2989	.	+	.	ID=gene-C9F00_RS16435;Name=C9F00_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16435;old_locus_tag=C9F00_16830
NZ_PYKC01000101.1	Protein Homology	CDS	2528	2989	.	+	0	ID=cds-WP_000634729.1;Parent=gene-C9F00_RS16435;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9F00_RS16435;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	3015	3794	.	+	.	ID=gene-C9F00_RS16440;Name=C9F00_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16440;old_locus_tag=C9F00_16835
NZ_PYKC01000101.1	Protein Homology	CDS	3015	3794	.	+	0	ID=cds-WP_000228866.1;Parent=gene-C9F00_RS16440;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9F00_RS16440;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	3772	4620	.	+	.	ID=gene-C9F00_RS16445;Name=C9F00_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16445;old_locus_tag=C9F00_16840
NZ_PYKC01000101.1	Protein Homology	CDS	3772	4620	.	+	0	ID=cds-WP_000178065.1;Parent=gene-C9F00_RS16445;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=C9F00_RS16445;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	4633	5694	.	+	.	ID=gene-C9F00_RS16450;Name=C9F00_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16450;old_locus_tag=C9F00_16845
NZ_PYKC01000101.1	Protein Homology	CDS	4633	5694	.	+	0	ID=cds-WP_135369564.1;Parent=gene-C9F00_RS16450;Dbxref=GenBank:WP_135369564.1;Name=WP_135369564.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9F00_RS16450;product=SIS domain-containing protein;protein_id=WP_135369564.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	5712	6722	.	+	.	ID=gene-C9F00_RS16455;Name=C9F00_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16455;old_locus_tag=C9F00_16850
NZ_PYKC01000101.1	Protein Homology	CDS	5712	6722	.	+	0	ID=cds-WP_000900307.1;Parent=gene-C9F00_RS16455;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=C9F00_RS16455;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	6855	9146	.	-	.	ID=gene-C9F00_RS16460;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9F00_RS16460;old_locus_tag=C9F00_16855
NZ_PYKC01000101.1	Protein Homology	CDS	6855	9146	.	-	0	ID=cds-WP_001292725.1;Parent=gene-C9F00_RS16460;Dbxref=GenBank:WP_001292725.1;Name=WP_001292725.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9F00_RS16460;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292725.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	9429	9890	.	-	.	ID=gene-C9F00_RS16465;Name=C9F00_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16465;old_locus_tag=C9F00_16860
NZ_PYKC01000101.1	Protein Homology	CDS	9429	9890	.	-	0	ID=cds-WP_001090314.1;Parent=gene-C9F00_RS16465;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9F00_RS16465;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	9948	10685	.	-	.	ID=gene-C9F00_RS16470;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9F00_RS16470;old_locus_tag=C9F00_16865
NZ_PYKC01000101.1	Protein Homology	CDS	9948	10685	.	-	0	ID=cds-WP_000799924.1;Parent=gene-C9F00_RS16470;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9F00_RS16470;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	10688	11227	.	-	.	ID=gene-C9F00_RS16475;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9F00_RS16475;old_locus_tag=C9F00_16870
NZ_PYKC01000101.1	Protein Homology	CDS	10688	11227	.	-	0	ID=cds-WP_000098578.1;Parent=gene-C9F00_RS16475;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9F00_RS16475;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	11320	11793	.	-	.	ID=gene-C9F00_RS16480;Name=C9F00_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16480;old_locus_tag=C9F00_16875
NZ_PYKC01000101.1	Protein Homology	CDS	11320	11793	.	-	0	ID=cds-WP_050068111.1;Parent=gene-C9F00_RS16480;Dbxref=GenBank:WP_050068111.1;Name=WP_050068111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9F00_RS16480;product=threonine/serine exporter;protein_id=WP_050068111.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	11784	12560	.	-	.	ID=gene-C9F00_RS16485;Name=C9F00_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16485;old_locus_tag=C9F00_16880
NZ_PYKC01000101.1	Protein Homology	CDS	11784	12560	.	-	0	ID=cds-WP_001727653.1;Parent=gene-C9F00_RS16485;Dbxref=GenBank:WP_001727653.1;Name=WP_001727653.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9F00_RS16485;product=threonine/serine ThrE exporter family protein;protein_id=WP_001727653.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	13272	13997	.	+	.	ID=gene-C9F00_RS16490;Name=C9F00_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16490;old_locus_tag=C9F00_16885
NZ_PYKC01000101.1	Protein Homology	CDS	13272	13997	.	+	0	ID=cds-WP_000936652.1;Parent=gene-C9F00_RS16490;Dbxref=GenBank:WP_000936652.1;Name=WP_000936652.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9F00_RS16490;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	13958	14632	.	+	.	ID=gene-C9F00_RS16495;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9F00_RS16495;old_locus_tag=C9F00_16890
NZ_PYKC01000101.1	Protein Homology	CDS	13958	14632	.	+	0	ID=cds-WP_000431546.1;Parent=gene-C9F00_RS16495;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9F00_RS16495;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	14683	15141	.	-	.	ID=gene-C9F00_RS16500;Name=C9F00_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16500;old_locus_tag=C9F00_16895
NZ_PYKC01000101.1	Protein Homology	CDS	14683	15141	.	-	0	ID=cds-WP_000058276.1;Parent=gene-C9F00_RS16500;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9F00_RS16500;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	15292	16080	.	-	.	ID=gene-C9F00_RS16505;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9F00_RS16505;old_locus_tag=C9F00_16900
NZ_PYKC01000101.1	Protein Homology	CDS	15292	16080	.	-	0	ID=cds-WP_000331520.1;Parent=gene-C9F00_RS16505;Dbxref=GenBank:WP_000331520.1;Name=WP_000331520.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9F00_RS16505;product=siderophore-iron reductase FhuF;protein_id=WP_000331520.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	16201	17265	.	-	.	ID=gene-C9F00_RS16510;Name=C9F00_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16510;old_locus_tag=C9F00_16905
NZ_PYKC01000101.1	Protein Homology	CDS	16201	17265	.	-	0	ID=cds-WP_000211208.1;Parent=gene-C9F00_RS16510;Dbxref=GenBank:WP_000211208.1;Name=WP_000211208.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9F00_RS16510;product=GGDEF domain-containing protein;protein_id=WP_000211208.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	17517	17753	.	+	.	ID=gene-C9F00_RS16515;Name=C9F00_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16515;old_locus_tag=C9F00_16910
NZ_PYKC01000101.1	Protein Homology	CDS	17517	17753	.	+	0	ID=cds-WP_000941877.1;Parent=gene-C9F00_RS16515;Dbxref=GenBank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9F00_RS16515;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	17785	17871	.	-	.	ID=gene-C9F00_RS16520;Name=C9F00_RS16520;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS16520;old_locus_tag=C9F00_16915
NZ_PYKC01000101.1	tRNAscan-SE	tRNA	17785	17871	.	-	.	ID=rna-C9F00_RS16520;Parent=gene-C9F00_RS16520;anticodon=(pos:complement(17835..17837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS16520;product=tRNA-Leu
NZ_PYKC01000101.1	tRNAscan-SE	exon	17785	17871	.	-	.	ID=exon-C9F00_RS16520-1;Parent=rna-C9F00_RS16520;anticodon=(pos:complement(17835..17837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS16520;product=tRNA-Leu
NZ_PYKC01000101.1	RefSeq	gene	18062	19090	.	-	.	ID=gene-C9F00_RS16525;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9F00_RS16525;old_locus_tag=C9F00_16920
NZ_PYKC01000101.1	Protein Homology	CDS	18062	19090	.	-	0	ID=cds-WP_001272271.1;Parent=gene-C9F00_RS16525;Dbxref=GenBank:WP_001272271.1;Name=WP_001272271.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F00_RS16525;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272271.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	19193	19630	.	+	.	ID=gene-C9F00_RS16530;Name=C9F00_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16530;old_locus_tag=C9F00_16925
NZ_PYKC01000101.1	Protein Homology	CDS	19193	19630	.	+	0	ID=cds-WP_000203998.1;Parent=gene-C9F00_RS16530;Dbxref=GenBank:WP_000203998.1;Name=WP_000203998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9F00_RS16530;product=DNA polymerase III subunit psi;protein_id=WP_000203998.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	19575	20021	.	+	.	ID=gene-C9F00_RS16535;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9F00_RS16535;old_locus_tag=C9F00_16930
NZ_PYKC01000101.1	Protein Homology	CDS	19575	20021	.	+	0	ID=cds-WP_001092435.1;Parent=gene-C9F00_RS16535;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9F00_RS16535;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	20043	20720	.	+	.	ID=gene-C9F00_RS16540;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9F00_RS16540;old_locus_tag=C9F00_16935
NZ_PYKC01000101.1	Protein Homology	CDS	20043	20720	.	+	0	ID=cds-WP_000870686.1;Parent=gene-C9F00_RS16540;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9F00_RS16540;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	20812	22401	.	+	.	ID=gene-C9F00_RS16545;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9F00_RS16545;old_locus_tag=C9F00_16940
NZ_PYKC01000101.1	Protein Homology	CDS	20812	22401	.	+	0	ID=cds-WP_000175966.1;Parent=gene-C9F00_RS16545;Dbxref=GenBank:WP_000175966.1;Name=WP_000175966.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9F00_RS16545;product=peptide chain release factor 3;protein_id=WP_000175966.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	22803	23420	.	+	.	ID=gene-C9F00_RS16550;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F00_RS16550;old_locus_tag=C9F00_16945
NZ_PYKC01000101.1	Protein Homology	CDS	22803	23420	.	+	0	ID=cds-WP_000178963.1;Parent=gene-C9F00_RS16550;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9F00_RS16550;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	gene	23549	23710	.	+	.	ID=gene-C9F00_RS16555;Name=C9F00_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS16555;old_locus_tag=C9F00_16950
NZ_PYKC01000101.1	Protein Homology	CDS	23549	23710	.	+	0	ID=cds-WP_000490276.1;Parent=gene-C9F00_RS16555;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9F00_RS16555;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11
NZ_PYKC01000101.1	RefSeq	pseudogene	23834	23956	.	+	.	ID=gene-C9F00_RS24505;Name=C9F00_RS24505;end_range=23956,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24505;partial=true;pseudo=true
NZ_PYKC01000101.1	Protein Homology	CDS	23834	23956	.	+	0	ID=cds-C9F00_RS24505;Parent=gene-C9F00_RS24505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=23956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9F00_RS24505;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000097.1 1 1225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000097.1	RefSeq	region	1	1225	.	+	.	ID=NZ_PYKC01000097.1:1..1225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000097.1	RefSeq	gene	220	1206	.	+	.	ID=gene-C9F00_RS15790;Name=C9F00_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15790;old_locus_tag=C9F00_16175
NZ_PYKC01000097.1	Protein Homology	CDS	220	1206	.	+	0	ID=cds-WP_058107667.1;Parent=gene-C9F00_RS15790;Dbxref=GenBank:WP_058107667.1;Name=WP_058107667.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9F00_RS15790;product=IS110 family transposase;protein_id=WP_058107667.1;transl_table=11
##sequence-region NZ_PYKC01000026.1 1 23765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000026.1	RefSeq	region	1	23765	.	+	.	ID=NZ_PYKC01000026.1:1..23765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000026.1	RefSeq	gene	1	2176	.	-	.	ID=gene-C9F00_RS04600;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9F00_RS04600;old_locus_tag=C9F00_04670;partial=true;start_range=.,1
NZ_PYKC01000026.1	Protein Homology	CDS	1	2176	.	-	0	ID=cds-WP_135492149.1;Parent=gene-C9F00_RS04600;Dbxref=GenBank:WP_135492149.1;Name=WP_135492149.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9F00_RS04600;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_135492149.1;start_range=.,1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	2173	2925	.	-	.	ID=gene-C9F00_RS04605;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9F00_RS04605;old_locus_tag=C9F00_04675
NZ_PYKC01000026.1	Protein Homology	CDS	2173	2925	.	-	0	ID=cds-WP_000996115.1;Parent=gene-C9F00_RS04605;Dbxref=GenBank:WP_000996115.1;Name=WP_000996115.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9F00_RS04605;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996115.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	2926	3129	.	-	.	ID=gene-C9F00_RS04610;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9F00_RS04610;old_locus_tag=C9F00_04680
NZ_PYKC01000026.1	Protein Homology	CDS	2926	3129	.	-	0	ID=cds-WP_000282616.1;Parent=gene-C9F00_RS04610;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9F00_RS04610;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	3374	4945	.	+	.	ID=gene-C9F00_RS04615;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9F00_RS04615;old_locus_tag=C9F00_04685
NZ_PYKC01000026.1	Protein Homology	CDS	3374	4945	.	+	0	ID=cds-WP_135492151.1;Parent=gene-C9F00_RS04615;Dbxref=GenBank:WP_135492151.1;Name=WP_135492151.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9F00_RS04615;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_135492151.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	4942	5133	.	+	.	ID=gene-C9F00_RS04620;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9F00_RS04620;old_locus_tag=C9F00_04690
NZ_PYKC01000026.1	Protein Homology	CDS	4942	5133	.	+	0	ID=cds-WP_000988321.1;Parent=gene-C9F00_RS04620;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9F00_RS04620;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	5130	6809	.	+	.	ID=gene-C9F00_RS04625;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F00_RS04625;old_locus_tag=C9F00_04695
NZ_PYKC01000026.1	Protein Homology	CDS	5130	6809	.	+	0	ID=cds-WP_000192022.1;Parent=gene-C9F00_RS04625;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9F00_RS04625;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	6891	6998	.	-	.	ID=gene-C9F00_RS04630;Name=C9F00_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04630;old_locus_tag=C9F00_04700
NZ_PYKC01000026.1	Protein Homology	CDS	6891	6998	.	-	0	ID=cds-WP_001537650.1;Parent=gene-C9F00_RS04630;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9F00_RS04630;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	pseudogene	7371	7523	.	+	.	ID=gene-C9F00_RS24330;Name=C9F00_RS24330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24330;partial=true;pseudo=true;start_range=.,7371
NZ_PYKC01000026.1	Protein Homology	CDS	7371	7523	.	+	0	ID=cds-C9F00_RS24330;Parent=gene-C9F00_RS24330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=C9F00_RS24330;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,7371;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	7641	8939	.	+	.	ID=gene-C9F00_RS04640;Name=C9F00_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04640;old_locus_tag=C9F00_04710
NZ_PYKC01000026.1	Protein Homology	CDS	7641	8939	.	+	0	ID=cds-WP_001150175.1;Parent=gene-C9F00_RS04640;Dbxref=GenBank:WP_001150175.1;Name=WP_001150175.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9F00_RS04640;product=aromatic amino acid transport family protein;protein_id=WP_001150175.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	9040	10053	.	-	.	ID=gene-C9F00_RS04645;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9F00_RS04645;old_locus_tag=C9F00_04715
NZ_PYKC01000026.1	Protein Homology	CDS	9040	10053	.	-	0	ID=cds-WP_135369450.1;Parent=gene-C9F00_RS04645;Dbxref=GenBank:WP_135369450.1;Name=WP_135369450.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9F00_RS04645;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_135369450.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	10050	11033	.	-	.	ID=gene-C9F00_RS04650;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9F00_RS04650;old_locus_tag=C9F00_04720
NZ_PYKC01000026.1	Protein Homology	CDS	10050	11033	.	-	0	ID=cds-WP_001196509.1;Parent=gene-C9F00_RS04650;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9F00_RS04650;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	11044	11946	.	-	.	ID=gene-C9F00_RS04655;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9F00_RS04655;old_locus_tag=C9F00_04725
NZ_PYKC01000026.1	Protein Homology	CDS	11044	11946	.	-	0	ID=cds-WP_000084690.1;Parent=gene-C9F00_RS04655;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F00_RS04655;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	11956	12975	.	-	.	ID=gene-C9F00_RS04660;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9F00_RS04660;old_locus_tag=C9F00_04730
NZ_PYKC01000026.1	Protein Homology	CDS	11956	12975	.	-	0	ID=cds-WP_000938843.1;Parent=gene-C9F00_RS04660;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9F00_RS04660;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	13132	14739	.	-	.	ID=gene-C9F00_RS04665;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=C9F00_RS04665;old_locus_tag=C9F00_04735
NZ_PYKC01000026.1	Protein Homology	CDS	13132	14739	.	-	0	ID=cds-WP_000028047.1;Parent=gene-C9F00_RS04665;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9F00_RS04665;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	15295	16620	.	-	.	ID=gene-C9F00_RS04670;Name=C9F00_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04670;old_locus_tag=C9F00_04740
NZ_PYKC01000026.1	Protein Homology	CDS	15295	16620	.	-	0	ID=cds-WP_135492153.1;Parent=gene-C9F00_RS04670;Dbxref=GenBank:WP_135492153.1;Name=WP_135492153.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F00_RS04670;product=uracil-xanthine permease family protein;protein_id=WP_135492153.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	16678	17802	.	-	.	ID=gene-C9F00_RS04675;Name=C9F00_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04675;old_locus_tag=C9F00_04745
NZ_PYKC01000026.1	Protein Homology	CDS	16678	17802	.	-	0	ID=cds-WP_001748889.1;Parent=gene-C9F00_RS04675;Dbxref=GenBank:WP_001748889.1;Name=WP_001748889.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9F00_RS04675;product=aryl-sulfate sulfotransferase;protein_id=WP_001748889.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	17952	18959	.	+	.	ID=gene-C9F00_RS04680;Name=C9F00_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04680;old_locus_tag=C9F00_04750
NZ_PYKC01000026.1	Protein Homology	CDS	17952	18959	.	+	0	ID=cds-WP_135369449.1;Parent=gene-C9F00_RS04680;Dbxref=GenBank:WP_135369449.1;Name=WP_135369449.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9F00_RS04680;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_135369449.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	18950	19068	.	-	.	ID=gene-C9F00_RS04685;Name=C9F00_RS04685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F00_RS04685;old_locus_tag=C9F00_04755
NZ_PYKC01000026.1	cmsearch	ncRNA	18950	19068	.	-	.	ID=rna-C9F00_RS04685;Parent=gene-C9F00_RS04685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS04685;product=RtT sRNA
NZ_PYKC01000026.1	cmsearch	exon	18950	19068	.	-	.	ID=exon-C9F00_RS04685-1;Parent=rna-C9F00_RS04685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS04685;product=RtT sRNA
NZ_PYKC01000026.1	RefSeq	gene	19103	19179	.	-	.	ID=gene-C9F00_RS04690;Name=C9F00_RS04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS04690;old_locus_tag=C9F00_04760
NZ_PYKC01000026.1	tRNAscan-SE	tRNA	19103	19179	.	-	.	ID=rna-C9F00_RS04690;Parent=gene-C9F00_RS04690;anticodon=(pos:complement(19143..19145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS04690;product=tRNA-Pro
NZ_PYKC01000026.1	tRNAscan-SE	exon	19103	19179	.	-	.	ID=exon-C9F00_RS04690-1;Parent=rna-C9F00_RS04690;anticodon=(pos:complement(19143..19145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS04690;product=tRNA-Pro
NZ_PYKC01000026.1	RefSeq	gene	19270	20961	.	-	.	ID=gene-C9F00_RS04695;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9F00_RS04695;old_locus_tag=C9F00_04765
NZ_PYKC01000026.1	Protein Homology	CDS	19270	20961	.	-	0	ID=cds-WP_135369448.1;Parent=gene-C9F00_RS04695;Dbxref=GenBank:WP_135369448.1;Name=WP_135369448.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9F00_RS04695;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_135369448.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	21192	21896	.	-	.	ID=gene-C9F00_RS04700;Name=C9F00_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04700;old_locus_tag=C9F00_04770
NZ_PYKC01000026.1	Protein Homology	CDS	21192	21896	.	-	0	ID=cds-WP_000637073.1;Parent=gene-C9F00_RS04700;Dbxref=GenBank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9F00_RS04700;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	22053	22634	.	+	.	ID=gene-C9F00_RS04705;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9F00_RS04705;old_locus_tag=C9F00_04775
NZ_PYKC01000026.1	Protein Homology	CDS	22053	22634	.	+	0	ID=cds-WP_001188420.1;Parent=gene-C9F00_RS04705;Dbxref=GenBank:WP_001188420.1;Name=WP_001188420.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9F00_RS04705;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188420.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	22612	23052	.	+	.	ID=gene-C9F00_RS04710;Name=C9F00_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04710;old_locus_tag=C9F00_04780
NZ_PYKC01000026.1	Protein Homology	CDS	22612	23052	.	+	0	ID=cds-WP_000619902.1;Parent=gene-C9F00_RS04710;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9F00_RS04710;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11
NZ_PYKC01000026.1	RefSeq	gene	23021	23765	.	-	.	ID=gene-C9F00_RS04715;Name=C9F00_RS04715;end_range=23765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04715;old_locus_tag=C9F00_04785;partial=true
NZ_PYKC01000026.1	Protein Homology	CDS	23021	23765	.	-	1	ID=cds-WP_280954439.1;Parent=gene-C9F00_RS04715;Dbxref=GenBank:WP_280954439.1;Name=WP_280954439.1;Ontology_term=GO:0016491,GO:0043546;end_range=23765,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9F00_RS04715;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_280954439.1;transl_table=11
##sequence-region NZ_PYKC01000038.1 1 23371
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000038.1	RefSeq	region	1	23371	.	+	.	ID=NZ_PYKC01000038.1:1..23371;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000038.1	RefSeq	pseudogene	1	176	.	+	.	ID=gene-C9F00_RS06025;Name=C9F00_RS06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06025;old_locus_tag=C9F00_06130;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000038.1	Protein Homology	CDS	1	176	.	+	2	ID=cds-C9F00_RS06025;Parent=gene-C9F00_RS06025;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702897.1;locus_tag=C9F00_RS06025;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	288	1937	.	+	.	ID=gene-C9F00_RS06030;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9F00_RS06030;old_locus_tag=C9F00_06135
NZ_PYKC01000038.1	Protein Homology	CDS	288	1937	.	+	0	ID=cds-WP_135369773.1;Parent=gene-C9F00_RS06030;Dbxref=GenBank:WP_135369773.1;Name=WP_135369773.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F00_RS06030;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_135369773.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	1934	2899	.	+	.	ID=gene-C9F00_RS06035;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9F00_RS06035;old_locus_tag=C9F00_06140
NZ_PYKC01000038.1	Protein Homology	CDS	1934	2899	.	+	0	ID=cds-WP_000583298.1;Parent=gene-C9F00_RS06035;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9F00_RS06035;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	2886	3776	.	+	.	ID=gene-C9F00_RS06040;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9F00_RS06040;old_locus_tag=C9F00_06145
NZ_PYKC01000038.1	Protein Homology	CDS	2886	3776	.	+	0	ID=cds-WP_135369774.1;Parent=gene-C9F00_RS06040;Dbxref=GenBank:WP_135369774.1;Name=WP_135369774.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9F00_RS06040;product=peptide ABC transporter permease SapC;protein_id=WP_135369774.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	3776	4768	.	+	.	ID=gene-C9F00_RS06045;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9F00_RS06045;old_locus_tag=C9F00_06150
NZ_PYKC01000038.1	Protein Homology	CDS	3776	4768	.	+	0	ID=cds-WP_001128869.1;Parent=gene-C9F00_RS06045;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9F00_RS06045;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	4770	5576	.	+	.	ID=gene-C9F00_RS06050;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9F00_RS06050;old_locus_tag=C9F00_06155
NZ_PYKC01000038.1	Protein Homology	CDS	4770	5576	.	+	0	ID=cds-WP_000230462.1;Parent=gene-C9F00_RS06050;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9F00_RS06050;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	5592	6299	.	-	.	ID=gene-C9F00_RS06055;Name=C9F00_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06055;old_locus_tag=C9F00_06160
NZ_PYKC01000038.1	Protein Homology	CDS	5592	6299	.	-	0	ID=cds-WP_135369775.1;Parent=gene-C9F00_RS06055;Dbxref=GenBank:WP_135369775.1;Name=WP_135369775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9F00_RS06055;product=EAL domain-containing protein;protein_id=WP_135369775.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	6765	8138	.	-	.	ID=gene-C9F00_RS06060;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9F00_RS06060;old_locus_tag=C9F00_06165
NZ_PYKC01000038.1	Protein Homology	CDS	6765	8138	.	-	0	ID=cds-WP_135420207.1;Parent=gene-C9F00_RS06060;Dbxref=GenBank:WP_135420207.1;Name=WP_135420207.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9F00_RS06060;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_135420207.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	8173	8352	.	+	.	ID=gene-C9F00_RS06065;Name=C9F00_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06065;old_locus_tag=C9F00_06170
NZ_PYKC01000038.1	Protein Homology	CDS	8173	8352	.	+	0	ID=cds-WP_010989024.1;Parent=gene-C9F00_RS06065;Dbxref=GenBank:WP_010989024.1;Name=WP_010989024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9F00_RS06065;product=hypothetical protein;protein_id=WP_010989024.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	8327	8626	.	+	.	ID=gene-C9F00_RS06070;Name=C9F00_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06070;old_locus_tag=C9F00_06175
NZ_PYKC01000038.1	Protein Homology	CDS	8327	8626	.	+	0	ID=cds-WP_129397197.1;Parent=gene-C9F00_RS06070;Dbxref=GenBank:WP_129397197.1;Name=WP_129397197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9F00_RS06070;product=hypothetical protein;protein_id=WP_129397197.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	8744	9532	.	+	.	ID=gene-C9F00_RS06075;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9F00_RS06075;old_locus_tag=C9F00_06180
NZ_PYKC01000038.1	Protein Homology	CDS	8744	9532	.	+	0	ID=cds-WP_135492206.1;Parent=gene-C9F00_RS06075;Dbxref=GenBank:WP_135492206.1;Name=WP_135492206.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9F00_RS06075;product=enoyl-ACP reductase FabI;protein_id=WP_135492206.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	pseudogene	9732	10709	.	+	.	ID=gene-C9F00_RS06080;Name=C9F00_RS06080;end_range=10709,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06080;old_locus_tag=C9F00_06185;partial=true;pseudo=true
NZ_PYKC01000038.1	Protein Homology	CDS	9732	10709	.	+	0	ID=cds-C9F00_RS06080;Parent=gene-C9F00_RS06080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9F00_RS06080;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	10954	12888	.	+	.	ID=gene-C9F00_RS06085;Name=C9F00_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06085;old_locus_tag=C9F00_06190
NZ_PYKC01000038.1	Protein Homology	CDS	10954	12888	.	+	0	ID=cds-WP_135369657.1;Parent=gene-C9F00_RS06085;Dbxref=GenBank:WP_135369657.1;Name=WP_135369657.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9F00_RS06085;product=exoribonuclease II;protein_id=WP_135369657.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	13150	15132	.	+	.	ID=gene-C9F00_RS06090;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=C9F00_RS06090;old_locus_tag=C9F00_06200
NZ_PYKC01000038.1	Protein Homology	CDS	13150	15132	.	+	0	ID=cds-WP_135369656.1;Parent=gene-C9F00_RS06090;Dbxref=GenBank:WP_135369656.1;Name=WP_135369656.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F00_RS06090;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135369656.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	15254	15433	.	+	.	ID=gene-C9F00_RS06095;Name=C9F00_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06095;old_locus_tag=C9F00_06205
NZ_PYKC01000038.1	Protein Homology	CDS	15254	15433	.	+	0	ID=cds-WP_001279854.1;Parent=gene-C9F00_RS06095;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9F00_RS06095;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	15520	16272	.	+	.	ID=gene-C9F00_RS06100;Name=C9F00_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06100;old_locus_tag=C9F00_06210
NZ_PYKC01000038.1	Protein Homology	CDS	15520	16272	.	+	0	ID=cds-WP_001088594.1;Parent=gene-C9F00_RS06100;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9F00_RS06100;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	16531	16749	.	+	.	ID=gene-C9F00_RS06105;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9F00_RS06105;old_locus_tag=C9F00_06215
NZ_PYKC01000038.1	Protein Homology	CDS	16531	16749	.	+	0	ID=cds-WP_000481166.1;Parent=gene-C9F00_RS06105;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9F00_RS06105;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	16869	17195	.	-	.	ID=gene-C9F00_RS06110;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9F00_RS06110;old_locus_tag=C9F00_06220
NZ_PYKC01000038.1	Protein Homology	CDS	16869	17195	.	-	0	ID=cds-WP_001285199.1;Parent=gene-C9F00_RS06110;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9F00_RS06110;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	17195	17932	.	-	.	ID=gene-C9F00_RS06115;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9F00_RS06115;old_locus_tag=C9F00_06225
NZ_PYKC01000038.1	Protein Homology	CDS	17195	17932	.	-	0	ID=cds-WP_001537903.1;Parent=gene-C9F00_RS06115;Dbxref=GenBank:WP_001537903.1;Name=WP_001537903.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9F00_RS06115;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001537903.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	18123	19292	.	-	.	ID=gene-C9F00_RS06120;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9F00_RS06120;old_locus_tag=C9F00_06235
NZ_PYKC01000038.1	Protein Homology	CDS	18123	19292	.	-	0	ID=cds-WP_000891378.1;Parent=gene-C9F00_RS06120;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9F00_RS06120;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	19299	19607	.	-	.	ID=gene-C9F00_RS06125;Name=C9F00_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06125;old_locus_tag=C9F00_06240
NZ_PYKC01000038.1	Protein Homology	CDS	19299	19607	.	-	0	ID=cds-WP_000876301.1;Parent=gene-C9F00_RS06125;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9F00_RS06125;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	19757	20521	.	-	.	ID=gene-C9F00_RS06130;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9F00_RS06130;old_locus_tag=C9F00_06250
NZ_PYKC01000038.1	Protein Homology	CDS	19757	20521	.	-	0	ID=cds-WP_000948636.1;Parent=gene-C9F00_RS06130;Dbxref=GenBank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9F00_RS06130;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	20717	21307	.	+	.	ID=gene-C9F00_RS06135;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9F00_RS06135;old_locus_tag=C9F00_06255
NZ_PYKC01000038.1	Protein Homology	CDS	20717	21307	.	+	0	ID=cds-WP_001176284.1;Parent=gene-C9F00_RS06135;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9F00_RS06135;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11
NZ_PYKC01000038.1	RefSeq	gene	21363	23371	.	-	.	ID=gene-C9F00_RS06140;Name=acnA;end_range=23371,.;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9F00_RS06140;old_locus_tag=C9F00_06260;partial=true
NZ_PYKC01000038.1	Protein Homology	CDS	21363	23371	.	-	2	ID=cds-WP_135492208.1;Parent=gene-C9F00_RS06140;Dbxref=GenBank:WP_135492208.1;Name=WP_135492208.1;Ontology_term=GO:0006099,GO:0003994;end_range=23371,.;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F00_RS06140;partial=true;product=aconitate hydratase AcnA;protein_id=WP_135492208.1;transl_table=11
##sequence-region NZ_PYKC01000153.1 1 23216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000153.1	RefSeq	region	1	23216	.	+	.	ID=NZ_PYKC01000153.1:1..23216;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000153.1	RefSeq	pseudogene	1	169	.	+	.	ID=gene-C9F00_RS22450;Name=C9F00_RS22450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22450;old_locus_tag=C9F00_22985;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000153.1	Protein Homology	CDS	1	169	.	+	1	ID=cds-C9F00_RS22450;Parent=gene-C9F00_RS22450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9F00_RS22450;partial=true;product=OsmC family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	520	849	.	+	.	ID=gene-C9F00_RS22455;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9F00_RS22455;old_locus_tag=C9F00_22990
NZ_PYKC01000153.1	Protein Homology	CDS	520	849	.	+	0	ID=cds-WP_001032161.1;Parent=gene-C9F00_RS22455;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9F00_RS22455;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	992	1777	.	+	.	ID=gene-C9F00_RS22460;Name=C9F00_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22460;old_locus_tag=C9F00_22995
NZ_PYKC01000153.1	Protein Homology	CDS	992	1777	.	+	0	ID=cds-WP_000698598.1;Parent=gene-C9F00_RS22460;Dbxref=GenBank:WP_000698598.1;Name=WP_000698598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9F00_RS22460;product=OBAP family protein;protein_id=WP_000698598.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	1906	3690	.	+	.	ID=gene-C9F00_RS22465;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9F00_RS22465;old_locus_tag=C9F00_23000
NZ_PYKC01000153.1	Protein Homology	CDS	1906	3690	.	+	0	ID=cds-WP_135369540.1;Parent=gene-C9F00_RS22465;Dbxref=GenBank:WP_135369540.1;Name=WP_135369540.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9F00_RS22465;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_135369540.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	3687	6215	.	+	.	ID=gene-C9F00_RS22470;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9F00_RS22470;old_locus_tag=C9F00_23005
NZ_PYKC01000153.1	Protein Homology	CDS	3687	6215	.	+	0	ID=cds-WP_135369539.1;Parent=gene-C9F00_RS22470;Dbxref=GenBank:WP_135369539.1;Name=WP_135369539.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F00_RS22470;product=malto-oligosyltrehalose synthase;protein_id=WP_135369539.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	6272	8347	.	+	.	ID=gene-C9F00_RS22475;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9F00_RS22475;old_locus_tag=C9F00_23010
NZ_PYKC01000153.1	Protein Homology	CDS	6272	8347	.	+	0	ID=cds-WP_135369538.1;Parent=gene-C9F00_RS22475;Dbxref=GenBank:WP_135369538.1;Name=WP_135369538.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9F00_RS22475;product=glycogen debranching protein GlgX;protein_id=WP_135369538.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	8461	9663	.	-	.	ID=gene-C9F00_RS22480;Name=C9F00_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22480;old_locus_tag=C9F00_23015
NZ_PYKC01000153.1	Protein Homology	CDS	8461	9663	.	-	0	ID=cds-WP_135369537.1;Parent=gene-C9F00_RS22480;Dbxref=GenBank:WP_135369537.1;Name=WP_135369537.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F00_RS22480;product=MalY/PatB family protein;protein_id=WP_135369537.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	9676	11127	.	-	.	ID=gene-C9F00_RS22485;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9F00_RS22485;old_locus_tag=C9F00_23020
NZ_PYKC01000153.1	Protein Homology	CDS	9676	11127	.	-	0	ID=cds-WP_017441347.1;Parent=gene-C9F00_RS22485;Dbxref=GenBank:WP_017441347.1;Name=WP_017441347.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F00_RS22485;product=Na+/H+ antiporter NhaC;protein_id=WP_017441347.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	11271	12278	.	-	.	ID=gene-C9F00_RS22490;Name=C9F00_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22490;old_locus_tag=C9F00_23025
NZ_PYKC01000153.1	Protein Homology	CDS	11271	12278	.	-	0	ID=cds-WP_135492538.1;Parent=gene-C9F00_RS22490;Dbxref=GenBank:WP_135492538.1;Name=WP_135492538.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F00_RS22490;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_135492538.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	12536	14002	.	+	.	ID=gene-C9F00_RS22495;Name=C9F00_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22495;old_locus_tag=C9F00_23030
NZ_PYKC01000153.1	Protein Homology	CDS	12536	14002	.	+	0	ID=cds-WP_135369536.1;Parent=gene-C9F00_RS22495;Dbxref=GenBank:WP_135369536.1;Name=WP_135369536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9F00_RS22495;product=hypothetical protein;protein_id=WP_135369536.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	14151	15077	.	-	.	ID=gene-C9F00_RS22500;Name=C9F00_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22500;old_locus_tag=C9F00_23035
NZ_PYKC01000153.1	Protein Homology	CDS	14151	15077	.	-	0	ID=cds-WP_135369535.1;Parent=gene-C9F00_RS22500;Dbxref=GenBank:WP_135369535.1;Name=WP_135369535.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961030.1;locus_tag=C9F00_RS22500;product=LysR family transcriptional regulator;protein_id=WP_135369535.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	15518	15640	.	+	.	ID=gene-C9F00_RS24895;Name=C9F00_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24895
NZ_PYKC01000153.1	Protein Homology	CDS	15518	15640	.	+	0	ID=cds-WP_431194533.1;Parent=gene-C9F00_RS24895;Dbxref=GenBank:WP_431194533.1;Name=WP_431194533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415762.1;locus_tag=C9F00_RS24895;product=DUF29 family protein;protein_id=WP_431194533.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	16085	16372	.	-	.	ID=gene-C9F00_RS22515;Name=C9F00_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22515;old_locus_tag=C9F00_23050
NZ_PYKC01000153.1	Protein Homology	CDS	16085	16372	.	-	0	ID=cds-WP_135369534.1;Parent=gene-C9F00_RS22515;Dbxref=GenBank:WP_135369534.1;Name=WP_135369534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9F00_RS22515;product=DUF1493 family protein;protein_id=WP_135369534.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	pseudogene	16496	16693	.	+	.	ID=gene-C9F00_RS22520;Name=C9F00_RS22520;end_range=16693,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22520;old_locus_tag=C9F00_23055;partial=true;pseudo=true;start_range=.,16496
NZ_PYKC01000153.1	Protein Homology	CDS	16496	16693	.	+	0	ID=cds-C9F00_RS22520;Parent=gene-C9F00_RS22520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=C9F00_RS22520;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,16496;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	16856	17911	.	-	.	ID=gene-C9F00_RS22525;Name=C9F00_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22525;old_locus_tag=C9F00_23060
NZ_PYKC01000153.1	Protein Homology	CDS	16856	17911	.	-	0	ID=cds-WP_064043641.1;Parent=gene-C9F00_RS22525;Dbxref=GenBank:WP_064043641.1;Name=WP_064043641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=C9F00_RS22525;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_064043641.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	18008	18790	.	-	.	ID=gene-C9F00_RS22530;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9F00_RS22530;old_locus_tag=C9F00_23065
NZ_PYKC01000153.1	Protein Homology	CDS	18008	18790	.	-	0	ID=cds-WP_135369533.1;Parent=gene-C9F00_RS22530;Dbxref=GenBank:WP_135369533.1;Name=WP_135369533.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: protein motif:HMM:NF001490.0;locus_tag=C9F00_RS22530;product=5'/3'-nucleotidase SurE;protein_id=WP_135369533.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	18860	19132	.	-	.	ID=gene-C9F00_RS22535;Name=C9F00_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22535;old_locus_tag=C9F00_23070
NZ_PYKC01000153.1	Protein Homology	CDS	18860	19132	.	-	0	ID=cds-WP_023218031.1;Parent=gene-C9F00_RS22535;Dbxref=GenBank:WP_023218031.1;Name=WP_023218031.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101670.1;locus_tag=C9F00_RS22535;product=HPr family phosphocarrier protein;protein_id=WP_023218031.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	19174	20013	.	-	.	ID=gene-C9F00_RS22540;Name=C9F00_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22540;old_locus_tag=C9F00_23075
NZ_PYKC01000153.1	Protein Homology	CDS	19174	20013	.	-	0	ID=cds-WP_023218030.1;Parent=gene-C9F00_RS22540;Dbxref=GenBank:WP_023218030.1;Name=WP_023218030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F00_RS22540;product=class II aldolase;protein_id=WP_023218030.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	20019	20762	.	-	.	ID=gene-C9F00_RS22545;Name=C9F00_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22545;old_locus_tag=C9F00_23080
NZ_PYKC01000153.1	Protein Homology	CDS	20019	20762	.	-	0	ID=cds-WP_023218029.1;Parent=gene-C9F00_RS22545;Dbxref=GenBank:WP_023218029.1;Name=WP_023218029.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020232695.1;locus_tag=C9F00_RS22545;product=GntR family transcriptional regulator;protein_id=WP_023218029.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	20949	21983	.	-	.	ID=gene-C9F00_RS22550;Name=C9F00_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22550;old_locus_tag=C9F00_23085
NZ_PYKC01000153.1	Protein Homology	CDS	20949	21983	.	-	0	ID=cds-WP_023218028.1;Parent=gene-C9F00_RS22550;Dbxref=GenBank:WP_023218028.1;Name=WP_023218028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=C9F00_RS22550;product=zinc-dependent dehydrogenase;protein_id=WP_023218028.1;transl_table=11
NZ_PYKC01000153.1	RefSeq	gene	21983	23209	.	-	.	ID=gene-C9F00_RS22555;Name=C9F00_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22555;old_locus_tag=C9F00_23090
NZ_PYKC01000153.1	Protein Homology	CDS	21983	23209	.	-	0	ID=cds-WP_280954500.1;Parent=gene-C9F00_RS22555;Dbxref=GenBank:WP_280954500.1;Name=WP_280954500.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF014801.6;locus_tag=C9F00_RS22555;product=FGGY-family carbohydrate kinase;protein_id=WP_280954500.1;transl_table=11
##sequence-region NZ_PYKC01000068.1 1 88421
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000068.1	RefSeq	region	1	88421	.	+	.	ID=NZ_PYKC01000068.1:1..88421;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000068.1	RefSeq	gene	1	606	.	+	.	ID=gene-C9F00_RS11425;Name=C9F00_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11425;old_locus_tag=C9F00_11700;partial=true;start_range=.,1
NZ_PYKC01000068.1	Protein Homology	CDS	1	606	.	+	0	ID=cds-WP_245306388.1;Parent=gene-C9F00_RS11425;Dbxref=GenBank:WP_245306388.1;Name=WP_245306388.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9F00_RS11425;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_245306388.1;start_range=.,1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	650	1297	.	-	.	ID=gene-C9F00_RS11430;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9F00_RS11430;old_locus_tag=C9F00_11705
NZ_PYKC01000068.1	Protein Homology	CDS	650	1297	.	-	0	ID=cds-WP_001115498.1;Parent=gene-C9F00_RS11430;Dbxref=GenBank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9F00_RS11430;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	2115	2678	.	+	.	ID=gene-C9F00_RS11445;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9F00_RS11445;old_locus_tag=C9F00_11720
NZ_PYKC01000068.1	Protein Homology	CDS	2115	2678	.	+	0	ID=cds-WP_077950732.1;Parent=gene-C9F00_RS11445;Dbxref=GenBank:WP_077950732.1;Name=WP_077950732.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9F00_RS11445;product=lipid A 3-O-deacylase PagL;protein_id=WP_077950732.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	2870	3058	.	-	.	ID=gene-C9F00_RS11450;Name=C9F00_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11450;old_locus_tag=C9F00_11725
NZ_PYKC01000068.1	Protein Homology	CDS	2870	3058	.	-	0	ID=cds-WP_001142121.1;Parent=gene-C9F00_RS11450;Dbxref=GenBank:WP_001142121.1;Name=WP_001142121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9F00_RS11450;product=hypothetical protein;protein_id=WP_001142121.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	3052	3144	.	-	.	ID=gene-C9F00_RS24435;Name=C9F00_RS24435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24435;partial=true;pseudo=true;start_range=.,3052
NZ_PYKC01000068.1	Protein Homology	CDS	3052	3144	.	-	0	ID=cds-C9F00_RS24435;Parent=gene-C9F00_RS24435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=C9F00_RS24435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3052;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	3100	3176	.	-	.	ID=gene-C9F00_RS11455;Name=C9F00_RS11455;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS11455;old_locus_tag=C9F00_11730
NZ_PYKC01000068.1	tRNAscan-SE	tRNA	3100	3176	.	-	.	ID=rna-C9F00_RS11455;Parent=gene-C9F00_RS11455;anticodon=(pos:complement(3140..3142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS11455;product=tRNA-Pro
NZ_PYKC01000068.1	tRNAscan-SE	exon	3100	3176	.	-	.	ID=exon-C9F00_RS11455-1;Parent=rna-C9F00_RS11455;anticodon=(pos:complement(3140..3142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS11455;product=tRNA-Pro
NZ_PYKC01000068.1	RefSeq	gene	3250	5010	.	-	.	ID=gene-C9F00_RS11460;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9F00_RS11460;old_locus_tag=C9F00_11735
NZ_PYKC01000068.1	Protein Homology	CDS	3250	5010	.	-	0	ID=cds-WP_135369178.1;Parent=gene-C9F00_RS11460;Dbxref=GenBank:WP_135369178.1;Name=WP_135369178.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9F00_RS11460;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_135369178.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	5042	5269	.	-	.	ID=gene-C9F00_RS11465;Name=C9F00_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11465;old_locus_tag=C9F00_11740
NZ_PYKC01000068.1	Protein Homology	CDS	5042	5269	.	-	0	ID=cds-WP_001135904.1;Parent=gene-C9F00_RS11465;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9F00_RS11465;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	5449	6471	.	+	.	ID=gene-C9F00_RS11470;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9F00_RS11470;old_locus_tag=C9F00_11745
NZ_PYKC01000068.1	Protein Homology	CDS	5449	6471	.	+	0	ID=cds-WP_135492301.1;Parent=gene-C9F00_RS11470;Dbxref=GenBank:WP_135492301.1;Name=WP_135492301.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9F00_RS11470;product=nucleoid-associated protein YejK;protein_id=WP_135492301.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	6484	7104	.	+	.	ID=gene-C9F00_RS11475;Name=C9F00_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11475;old_locus_tag=C9F00_11750
NZ_PYKC01000068.1	Protein Homology	CDS	6484	7104	.	+	0	ID=cds-WP_135369179.1;Parent=gene-C9F00_RS11475;Dbxref=GenBank:WP_135369179.1;Name=WP_135369179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9F00_RS11475;product=hypothetical protein;protein_id=WP_135369179.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	7213	7497	.	-	.	ID=gene-C9F00_RS11480;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9F00_RS11480;old_locus_tag=C9F00_11755
NZ_PYKC01000068.1	Protein Homology	CDS	7213	7497	.	-	0	ID=cds-WP_000494192.1;Parent=gene-C9F00_RS11480;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9F00_RS11480;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	7622	9382	.	-	.	ID=gene-C9F00_RS11485;Name=C9F00_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11485;old_locus_tag=C9F00_11760
NZ_PYKC01000068.1	Protein Homology	CDS	7622	9382	.	-	0	ID=cds-WP_000578123.1;Parent=gene-C9F00_RS11485;Dbxref=GenBank:WP_000578123.1;Name=WP_000578123.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9F00_RS11485;product=DEAD/DEAH box helicase;protein_id=WP_000578123.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	9534	10229	.	+	.	ID=gene-C9F00_RS11490;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9F00_RS11490;old_locus_tag=C9F00_11765
NZ_PYKC01000068.1	Protein Homology	CDS	9534	10229	.	+	0	ID=cds-WP_001234836.1;Parent=gene-C9F00_RS11490;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9F00_RS11490;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	10257	11447	.	+	.	ID=gene-C9F00_RS11495;Name=C9F00_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11495;old_locus_tag=C9F00_11770
NZ_PYKC01000068.1	Protein Homology	CDS	10257	11447	.	+	0	ID=cds-WP_000213349.1;Parent=gene-C9F00_RS11495;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9F00_RS11495;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	11838	12182	.	+	.	ID=gene-C9F00_RS11500;Name=C9F00_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11500;old_locus_tag=C9F00_11780
NZ_PYKC01000068.1	Protein Homology	CDS	11838	12182	.	+	0	ID=cds-WP_001094639.1;Parent=gene-C9F00_RS11500;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9F00_RS11500;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	12186	13775	.	-	.	ID=gene-C9F00_RS11505;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=C9F00_RS11505;old_locus_tag=C9F00_11785
NZ_PYKC01000068.1	Protein Homology	CDS	12186	13775	.	-	0	ID=cds-WP_000203612.1;Parent=gene-C9F00_RS11505;Dbxref=GenBank:WP_000203612.1;Name=WP_000203612.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=C9F00_RS11505;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203612.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	13777	14802	.	-	.	ID=gene-C9F00_RS11510;Name=C9F00_RS11510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11510;old_locus_tag=C9F00_11790;pseudo=true
NZ_PYKC01000068.1	Protein Homology	CDS	13777	14802	.	-	0	ID=cds-C9F00_RS11510;Parent=gene-C9F00_RS11510;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9F00_RS11510;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	14802	15896	.	-	.	ID=gene-C9F00_RS11515;Name=C9F00_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11515;old_locus_tag=C9F00_11795
NZ_PYKC01000068.1	Protein Homology	CDS	14802	15896	.	-	0	ID=cds-WP_000501623.1;Parent=gene-C9F00_RS11515;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9F00_RS11515;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	15906	17711	.	-	.	ID=gene-C9F00_RS11520;Name=C9F00_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11520;old_locus_tag=C9F00_11800
NZ_PYKC01000068.1	Protein Homology	CDS	15906	17711	.	-	0	ID=cds-WP_000561742.1;Parent=gene-C9F00_RS11520;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9F00_RS11520;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	17818	19374	.	-	.	ID=gene-C9F00_RS11525;Name=C9F00_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11525;old_locus_tag=C9F00_11805
NZ_PYKC01000068.1	Protein Homology	CDS	17818	19374	.	-	0	ID=cds-WP_135369180.1;Parent=gene-C9F00_RS11525;Dbxref=GenBank:WP_135369180.1;Name=WP_135369180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9F00_RS11525;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135369180.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	19700	20272	.	-	.	ID=gene-C9F00_RS11530;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9F00_RS11530;old_locus_tag=C9F00_11810
NZ_PYKC01000068.1	Protein Homology	CDS	19700	20272	.	-	0	ID=cds-WP_000241015.1;Parent=gene-C9F00_RS11530;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9F00_RS11530;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	20686	21405	.	-	.	ID=gene-C9F00_RS11535;Name=C9F00_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11535;old_locus_tag=C9F00_11820
NZ_PYKC01000068.1	Protein Homology	CDS	20686	21405	.	-	0	ID=cds-WP_000178091.1;Parent=gene-C9F00_RS11535;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9F00_RS11535;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	21435	22421	.	-	.	ID=gene-C9F00_RS11540;Name=C9F00_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11540;old_locus_tag=C9F00_11825
NZ_PYKC01000068.1	Protein Homology	CDS	21435	22421	.	-	0	ID=cds-WP_000169350.1;Parent=gene-C9F00_RS11540;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9F00_RS11540;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	22633	23205	.	-	.	ID=gene-C9F00_RS11545;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9F00_RS11545;old_locus_tag=C9F00_11830
NZ_PYKC01000068.1	Protein Homology	CDS	22633	23205	.	-	0	ID=cds-WP_001136822.1;Parent=gene-C9F00_RS11545;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9F00_RS11545;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	23529	23783	.	+	.	ID=gene-C9F00_RS11550;Name=C9F00_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11550;old_locus_tag=C9F00_11835
NZ_PYKC01000068.1	Protein Homology	CDS	23529	23783	.	+	0	ID=cds-WP_001523448.1;Parent=gene-C9F00_RS11550;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9F00_RS11550;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	24321	24443	.	+	.	ID=gene-C9F00_RS11555;Name=C9F00_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11555;old_locus_tag=C9F00_11845
NZ_PYKC01000068.1	Protein Homology	CDS	24321	24443	.	+	0	ID=cds-WP_001519564.1;Parent=gene-C9F00_RS11555;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9F00_RS11555;product=membrane protein;protein_id=WP_001519564.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	24445	25110	.	+	.	ID=gene-C9F00_RS11560;Name=C9F00_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11560;old_locus_tag=C9F00_11850
NZ_PYKC01000068.1	Protein Homology	CDS	24445	25110	.	+	0	ID=cds-WP_135369714.1;Parent=gene-C9F00_RS11560;Dbxref=GenBank:WP_135369714.1;Name=WP_135369714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9F00_RS11560;product=GNVR domain-containing protein;protein_id=WP_135369714.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	25175	26356	.	-	.	ID=gene-C9F00_RS11565;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9F00_RS11565;old_locus_tag=C9F00_11855
NZ_PYKC01000068.1	Protein Homology	CDS	25175	26356	.	-	0	ID=cds-WP_135369713.1;Parent=gene-C9F00_RS11565;Dbxref=GenBank:WP_135369713.1;Name=WP_135369713.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9F00_RS11565;product=sugar efflux transporter SetB;protein_id=WP_135369713.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	26725	27855	.	+	.	ID=gene-C9F00_RS11570;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9F00_RS11570;old_locus_tag=C9F00_11860
NZ_PYKC01000068.1	Protein Homology	CDS	26725	27855	.	+	0	ID=cds-WP_000487287.1;Parent=gene-C9F00_RS11570;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9F00_RS11570;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	27855	28793	.	+	.	ID=gene-C9F00_RS11575;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F00_RS11575;old_locus_tag=C9F00_11865
NZ_PYKC01000068.1	Protein Homology	CDS	27855	28793	.	+	0	ID=cds-WP_000091249.1;Parent=gene-C9F00_RS11575;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9F00_RS11575;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	28810	30498	.	+	.	ID=gene-C9F00_RS11580;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=C9F00_RS11580;old_locus_tag=C9F00_11870
NZ_PYKC01000068.1	Protein Homology	CDS	28810	30498	.	+	0	ID=cds-WP_000854417.1;Parent=gene-C9F00_RS11580;Dbxref=GenBank:WP_000854417.1;Name=WP_000854417.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9F00_RS11580;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854417.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	30563	31420	.	-	.	ID=gene-C9F00_RS11585;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9F00_RS11585;old_locus_tag=C9F00_11875
NZ_PYKC01000068.1	Protein Homology	CDS	30563	31420	.	-	0	ID=cds-WP_135492303.1;Parent=gene-C9F00_RS11585;Dbxref=GenBank:WP_135492303.1;Name=WP_135492303.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9F00_RS11585;product=deoxyribonuclease IV;protein_id=WP_135492303.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	31499	32548	.	-	.	ID=gene-C9F00_RS11590;Name=C9F00_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11590;old_locus_tag=C9F00_11880
NZ_PYKC01000068.1	Protein Homology	CDS	31499	32548	.	-	0	ID=cds-WP_000137966.1;Parent=gene-C9F00_RS11590;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9F00_RS11590;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	32669	33532	.	+	.	ID=gene-C9F00_RS11595;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9F00_RS11595;old_locus_tag=C9F00_11885
NZ_PYKC01000068.1	Protein Homology	CDS	32669	33532	.	+	0	ID=cds-WP_000548315.1;Parent=gene-C9F00_RS11595;Dbxref=GenBank:WP_000548315.1;Name=WP_000548315.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9F00_RS11595;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548315.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	33722	35191	.	+	.	ID=gene-C9F00_RS11600;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=C9F00_RS11600;old_locus_tag=C9F00_11890
NZ_PYKC01000068.1	Protein Homology	CDS	33722	35191	.	+	0	ID=cds-WP_135369712.1;Parent=gene-C9F00_RS11600;Dbxref=GenBank:WP_135369712.1;Name=WP_135369712.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9F00_RS11600;product=lysine-specific permease;protein_id=WP_135369712.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	35538	37529	.	+	.	ID=gene-C9F00_RS11610;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9F00_RS11610;old_locus_tag=C9F00_11900
NZ_PYKC01000068.1	Protein Homology	CDS	35538	37529	.	+	0	ID=cds-WP_000488255.1;Parent=gene-C9F00_RS11610;Dbxref=GenBank:WP_000488255.1;Name=WP_000488255.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9F00_RS11610;product=catecholate siderophore receptor CirA;protein_id=WP_000488255.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	37573	38895	.	-	.	ID=gene-C9F00_RS11615;Name=C9F00_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11615;old_locus_tag=C9F00_11905
NZ_PYKC01000068.1	Protein Homology	CDS	37573	38895	.	-	0	ID=cds-WP_000023807.1;Parent=gene-C9F00_RS11615;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9F00_RS11615;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	38928	39815	.	-	.	ID=gene-C9F00_RS11620;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F00_RS11620;old_locus_tag=C9F00_11910
NZ_PYKC01000068.1	Protein Homology	CDS	38928	39815	.	-	0	ID=cds-WP_058108583.1;Parent=gene-C9F00_RS11620;Dbxref=GenBank:WP_058108583.1;Name=WP_058108583.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9F00_RS11620;product=phosphoserine phosphatase SerB;protein_id=WP_058108583.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	40032	41399	.	+	.	ID=gene-C9F00_RS11625;Name=C9F00_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11625;old_locus_tag=C9F00_11915
NZ_PYKC01000068.1	Protein Homology	CDS	40032	41399	.	+	0	ID=cds-WP_103133245.1;Parent=gene-C9F00_RS11625;Dbxref=GenBank:WP_103133245.1;Name=WP_103133245.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9F00_RS11625;product=L-serine ammonia-lyase;protein_id=WP_103133245.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	41404	41793	.	+	.	ID=gene-C9F00_RS11630;Name=C9F00_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11630;old_locus_tag=C9F00_11920
NZ_PYKC01000068.1	Protein Homology	CDS	41404	41793	.	+	0	ID=cds-WP_000876817.1;Parent=gene-C9F00_RS11630;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9F00_RS11630;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	41782	42639	.	-	.	ID=gene-C9F00_RS11635;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9F00_RS11635;old_locus_tag=C9F00_11925
NZ_PYKC01000068.1	Protein Homology	CDS	41782	42639	.	-	0	ID=cds-WP_000425488.1;Parent=gene-C9F00_RS11635;Dbxref=GenBank:WP_000425488.1;Name=WP_000425488.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9F00_RS11635;product=S-formylglutathione hydrolase;protein_id=WP_000425488.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	42969	43637	.	+	.	ID=gene-C9F00_RS11640;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9F00_RS11640;old_locus_tag=C9F00_11935
NZ_PYKC01000068.1	Protein Homology	CDS	42969	43637	.	+	0	ID=cds-WP_001139611.1;Parent=gene-C9F00_RS11640;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9F00_RS11640;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	43652	44794	.	+	.	ID=gene-C9F00_RS11645;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=C9F00_RS11645;old_locus_tag=C9F00_11940
NZ_PYKC01000068.1	Protein Homology	CDS	43652	44794	.	+	0	ID=cds-WP_001518079.1;Parent=gene-C9F00_RS11645;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9F00_RS11645;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	44944	45966	.	+	.	ID=gene-C9F00_RS11650;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9F00_RS11650;old_locus_tag=C9F00_11945
NZ_PYKC01000068.1	Protein Homology	CDS	44944	45966	.	+	0	ID=cds-WP_000628631.1;Parent=gene-C9F00_RS11650;Dbxref=GenBank:WP_000628631.1;Name=WP_000628631.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9F00_RS11650;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628631.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	46469	47236	.	-	.	ID=gene-C9F00_RS11655;Name=C9F00_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11655;old_locus_tag=C9F00_11950
NZ_PYKC01000068.1	Protein Homology	CDS	46469	47236	.	-	0	ID=cds-WP_000015789.1;Parent=gene-C9F00_RS11655;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9F00_RS11655;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	47345	49789	.	-	.	ID=gene-C9F00_RS11660;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9F00_RS11660;old_locus_tag=C9F00_11955
NZ_PYKC01000068.1	Protein Homology	CDS	47345	49789	.	-	0	ID=cds-WP_000973041.1;Parent=gene-C9F00_RS11660;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9F00_RS11660;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	50029	50607	.	+	.	ID=gene-C9F00_RS11665;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9F00_RS11665;old_locus_tag=C9F00_11960
NZ_PYKC01000068.1	Protein Homology	CDS	50029	50607	.	+	0	ID=cds-WP_000284051.1;Parent=gene-C9F00_RS11665;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9F00_RS11665;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	50820	51587	.	+	.	ID=gene-C9F00_RS11670;Name=C9F00_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11670;old_locus_tag=C9F00_11965
NZ_PYKC01000068.1	Protein Homology	CDS	50820	51587	.	+	0	ID=cds-WP_000333387.1;Parent=gene-C9F00_RS11670;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9F00_RS11670;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	51558	52298	.	-	.	ID=gene-C9F00_RS11675;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9F00_RS11675;old_locus_tag=C9F00_11970
NZ_PYKC01000068.1	Protein Homology	CDS	51558	52298	.	-	0	ID=cds-WP_001225658.1;Parent=gene-C9F00_RS11675;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9F00_RS11675;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	52548	53603	.	+	.	ID=gene-C9F00_RS11680;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9F00_RS11680;old_locus_tag=C9F00_11975
NZ_PYKC01000068.1	Protein Homology	CDS	52548	53603	.	+	0	ID=cds-WP_001226204.1;Parent=gene-C9F00_RS11680;Dbxref=GenBank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9F00_RS11680;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	53822	54961	.	+	.	ID=gene-C9F00_RS11685;Name=C9F00_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11685;old_locus_tag=C9F00_11980
NZ_PYKC01000068.1	Protein Homology	CDS	53822	54961	.	+	0	ID=cds-WP_000528901.1;Parent=gene-C9F00_RS11685;Dbxref=GenBank:WP_000528901.1;Name=WP_000528901.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9F00_RS11685;product=RNA ligase RtcB family protein;protein_id=WP_000528901.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	54958	55572	.	+	.	ID=gene-C9F00_RS11690;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9F00_RS11690;old_locus_tag=C9F00_11985
NZ_PYKC01000068.1	Protein Homology	CDS	54958	55572	.	+	0	ID=cds-WP_000602086.1;Parent=gene-C9F00_RS11690;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9F00_RS11690;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	55728	57185	.	-	.	ID=gene-C9F00_RS11695;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9F00_RS11695;old_locus_tag=C9F00_11990
NZ_PYKC01000068.1	Protein Homology	CDS	55728	57185	.	-	0	ID=cds-WP_001292977.1;Parent=gene-C9F00_RS11695;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9F00_RS11695;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	57434	57892	.	+	.	ID=gene-C9F00_RS11700;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9F00_RS11700;old_locus_tag=C9F00_11995
NZ_PYKC01000068.1	Protein Homology	CDS	57434	57892	.	+	0	ID=cds-WP_001292018.1;Parent=gene-C9F00_RS11700;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9F00_RS11700;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	57981	59225	.	+	.	ID=gene-C9F00_RS11705;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=C9F00_RS11705;old_locus_tag=C9F00_12000
NZ_PYKC01000068.1	Protein Homology	CDS	57981	59225	.	+	0	ID=cds-WP_000189586.1;Parent=gene-C9F00_RS11705;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9F00_RS11705;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	59283	59684	.	+	.	ID=gene-C9F00_RS11710;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9F00_RS11710;old_locus_tag=C9F00_12005
NZ_PYKC01000068.1	Protein Homology	CDS	59283	59684	.	+	0	ID=cds-WP_000174696.1;Parent=gene-C9F00_RS11710;Dbxref=GenBank:WP_000174696.1;Name=WP_000174696.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9F00_RS11710;product=sigma factor-binding protein Crl;protein_id=WP_000174696.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	59735	60787	.	-	.	ID=gene-C9F00_RS11715;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9F00_RS11715;old_locus_tag=C9F00_12010
NZ_PYKC01000068.1	Protein Homology	CDS	59735	60787	.	-	0	ID=cds-WP_001043662.1;Parent=gene-C9F00_RS11715;Dbxref=GenBank:WP_001043662.1;Name=WP_001043662.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9F00_RS11715;product=phosphoporin PhoE;protein_id=WP_001043662.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	61070	62173	.	+	.	ID=gene-C9F00_RS11720;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9F00_RS11720;old_locus_tag=C9F00_12015
NZ_PYKC01000068.1	Protein Homology	CDS	61070	62173	.	+	0	ID=cds-WP_001285275.1;Parent=gene-C9F00_RS11720;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9F00_RS11720;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	62185	63435	.	+	.	ID=gene-C9F00_RS11725;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9F00_RS11725;old_locus_tag=C9F00_12020
NZ_PYKC01000068.1	Protein Homology	CDS	62185	63435	.	+	0	ID=cds-WP_135369199.1;Parent=gene-C9F00_RS11725;Dbxref=GenBank:WP_135369199.1;Name=WP_135369199.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9F00_RS11725;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_135369199.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	63551	63626	.	+	.	ID=gene-C9F00_RS11730;Name=C9F00_RS11730;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS11730;old_locus_tag=C9F00_12025
NZ_PYKC01000068.1	tRNAscan-SE	tRNA	63551	63626	.	+	.	ID=rna-C9F00_RS11730;Parent=gene-C9F00_RS11730;anticodon=(pos:63584..63586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS11730;product=tRNA-Thr
NZ_PYKC01000068.1	tRNAscan-SE	exon	63551	63626	.	+	.	ID=exon-C9F00_RS11730-1;Parent=rna-C9F00_RS11730;anticodon=(pos:63584..63586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS11730;product=tRNA-Thr
NZ_PYKC01000068.1	RefSeq	pseudogene	63790	64044	.	+	.	ID=gene-C9F00_RS11735;Name=C9F00_RS11735;end_range=64044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11735;old_locus_tag=C9F00_12030;partial=true;pseudo=true
NZ_PYKC01000068.1	Protein Homology	CDS	63790	64044	.	+	0	ID=cds-C9F00_RS11735;Parent=gene-C9F00_RS11735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=64044,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=C9F00_RS11735;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	64062	64841	.	-	.	ID=gene-C9F00_RS11740;Name=C9F00_RS11740;end_range=64841,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11740;old_locus_tag=C9F00_12035;partial=true;pseudo=true
NZ_PYKC01000068.1	Protein Homology	CDS	64062	64841	.	-	0	ID=cds-C9F00_RS11740;Parent=gene-C9F00_RS11740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=64841,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F00_RS11740;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	64843	65557	.	+	.	ID=gene-C9F00_RS11745;Name=C9F00_RS11745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11745;old_locus_tag=C9F00_12040;partial=true;pseudo=true;start_range=.,64843
NZ_PYKC01000068.1	Protein Homology	CDS	64843	65557	.	+	0	ID=cds-C9F00_RS11745;Parent=gene-C9F00_RS11745;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003828496.1;locus_tag=C9F00_RS11745;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,64843;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	65667	65990	.	+	.	ID=gene-C9F00_RS11750;Name=C9F00_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11750;old_locus_tag=C9F00_12045
NZ_PYKC01000068.1	Protein Homology	CDS	65667	65990	.	+	0	ID=cds-WP_001573898.1;Parent=gene-C9F00_RS11750;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9F00_RS11750;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	66331	67569	.	+	.	ID=gene-C9F00_RS11755;Name=C9F00_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11755;old_locus_tag=C9F00_12050
NZ_PYKC01000068.1	Protein Homology	CDS	66331	67569	.	+	0	ID=cds-WP_135369200.1;Parent=gene-C9F00_RS11755;Dbxref=GenBank:WP_135369200.1;Name=WP_135369200.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9F00_RS11755;product=MFS transporter;protein_id=WP_135369200.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	67701	69122	.	+	.	ID=gene-C9F00_RS11760;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F00_RS11760;old_locus_tag=C9F00_12055
NZ_PYKC01000068.1	Protein Homology	CDS	67701	69122	.	+	0	ID=cds-WP_001274861.1;Parent=gene-C9F00_RS11760;Dbxref=GenBank:WP_001274861.1;Name=WP_001274861.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9F00_RS11760;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001274861.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	69124	69750	.	+	.	ID=gene-C9F00_RS11765;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F00_RS11765;old_locus_tag=C9F00_12060
NZ_PYKC01000068.1	Protein Homology	CDS	69124	69750	.	+	0	ID=cds-WP_135369198.1;Parent=gene-C9F00_RS11765;Dbxref=GenBank:WP_135369198.1;Name=WP_135369198.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9F00_RS11765;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_135369198.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	69765	70643	.	+	.	ID=gene-C9F00_RS11770;Name=C9F00_RS11770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11770;old_locus_tag=C9F00_12065;pseudo=true
NZ_PYKC01000068.1	Protein Homology	CDS	69765	70643	.	+	0	ID=cds-C9F00_RS11770;Parent=gene-C9F00_RS11770;Note=internal stop;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9F00_RS11770;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	70643	71557	.	+	.	ID=gene-C9F00_RS11775;Name=C9F00_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11775;old_locus_tag=C9F00_12070
NZ_PYKC01000068.1	Protein Homology	CDS	70643	71557	.	+	0	ID=cds-WP_000105592.1;Parent=gene-C9F00_RS11775;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9F00_RS11775;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	71591	72556	.	+	.	ID=gene-C9F00_RS11780;Name=C9F00_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11780;old_locus_tag=C9F00_12075
NZ_PYKC01000068.1	Protein Homology	CDS	71591	72556	.	+	0	ID=cds-WP_000859020.1;Parent=gene-C9F00_RS11780;Dbxref=GenBank:WP_000859020.1;Name=WP_000859020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9F00_RS11780;product=LysR family transcriptional regulator;protein_id=WP_000859020.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	72501	72773	.	-	.	ID=gene-C9F00_RS11785;Name=C9F00_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11785;old_locus_tag=C9F00_12080
NZ_PYKC01000068.1	Protein Homology	CDS	72501	72773	.	-	0	ID=cds-WP_001675688.1;Parent=gene-C9F00_RS11785;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9F00_RS11785;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	73464	73862	.	+	.	ID=gene-C9F00_RS11790;Name=C9F00_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11790;old_locus_tag=C9F00_12085
NZ_PYKC01000068.1	Protein Homology	CDS	73464	73862	.	+	0	ID=cds-WP_000766845.1;Parent=gene-C9F00_RS11790;Dbxref=GenBank:WP_000766845.1;Name=WP_000766845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9F00_RS11790;product=hypothetical protein;protein_id=WP_000766845.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	73909	74667	.	-	.	ID=gene-C9F00_RS11795;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9F00_RS11795;old_locus_tag=C9F00_12090
NZ_PYKC01000068.1	Protein Homology	CDS	73909	74667	.	-	0	ID=cds-WP_080230028.1;Parent=gene-C9F00_RS11795;Dbxref=GenBank:WP_080230028.1;Name=WP_080230028.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9F00_RS11795;product=fimbrial biogenesis chaperone StbE;protein_id=WP_080230028.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	74633	75958	.	-	.	ID=gene-C9F00_RS11800;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9F00_RS11800;old_locus_tag=C9F00_12095
NZ_PYKC01000068.1	Protein Homology	CDS	74633	75958	.	-	0	ID=cds-WP_000899100.1;Parent=gene-C9F00_RS11800;Dbxref=GenBank:WP_000899100.1;Name=WP_000899100.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9F00_RS11800;product=fimbrial usher protein StbD;protein_id=WP_000899100.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	75963	78524	.	-	.	ID=gene-C9F00_RS11805;Name=C9F00_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11805;old_locus_tag=C9F00_12100
NZ_PYKC01000068.1	Protein Homology	CDS	75963	78524	.	-	0	ID=cds-WP_135369131.1;Parent=gene-C9F00_RS11805;Dbxref=GenBank:WP_135369131.1;Name=WP_135369131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9F00_RS11805;product=fimbrial outer membrane usher protein;protein_id=WP_135369131.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	78508	79269	.	-	.	ID=gene-C9F00_RS11810;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9F00_RS11810;old_locus_tag=C9F00_12105
NZ_PYKC01000068.1	Protein Homology	CDS	78508	79269	.	-	0	ID=cds-WP_079897707.1;Parent=gene-C9F00_RS11810;Dbxref=GenBank:WP_079897707.1;Name=WP_079897707.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9F00_RS11810;product=fimbrial biogenesis chaperone StbB;protein_id=WP_079897707.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	79331	79867	.	-	.	ID=gene-C9F00_RS11815;Name=C9F00_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11815;old_locus_tag=C9F00_12110
NZ_PYKC01000068.1	Protein Homology	CDS	79331	79867	.	-	0	ID=cds-WP_000062035.1;Parent=gene-C9F00_RS11815;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9F00_RS11815;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	80531	81265	.	+	.	ID=gene-C9F00_RS11820;Name=C9F00_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11820;old_locus_tag=C9F00_12120
NZ_PYKC01000068.1	Protein Homology	CDS	80531	81265	.	+	0	ID=cds-WP_001005866.1;Parent=gene-C9F00_RS11820;Dbxref=GenBank:WP_001005866.1;Name=WP_001005866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9F00_RS11820;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005866.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	pseudogene	81238	81538	.	+	.	ID=gene-C9F00_RS11825;Name=C9F00_RS11825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11825;old_locus_tag=C9F00_12125;pseudo=true
NZ_PYKC01000068.1	Protein Homology	CDS	81238	81538	.	+	0	ID=cds-C9F00_RS11825;Parent=gene-C9F00_RS11825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9F00_RS11825;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	82040	83614	.	+	.	ID=gene-C9F00_RS11830;Name=C9F00_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11830;old_locus_tag=C9F00_12130
NZ_PYKC01000068.1	Protein Homology	CDS	82040	83614	.	+	0	ID=cds-WP_135369132.1;Parent=gene-C9F00_RS11830;Dbxref=GenBank:WP_135369132.1;Name=WP_135369132.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9F00_RS11830;product=EAL domain-containing protein;protein_id=WP_135369132.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	83714	84457	.	+	.	ID=gene-C9F00_RS11835;Name=C9F00_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11835;old_locus_tag=C9F00_12135
NZ_PYKC01000068.1	Protein Homology	CDS	83714	84457	.	+	0	ID=cds-WP_058107948.1;Parent=gene-C9F00_RS11835;Dbxref=GenBank:WP_058107948.1;Name=WP_058107948.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9F00_RS11835;product=transcriptional regulator;protein_id=WP_058107948.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	84430	84918	.	+	.	ID=gene-C9F00_RS11840;Name=C9F00_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11840;old_locus_tag=C9F00_12140
NZ_PYKC01000068.1	Protein Homology	CDS	84430	84918	.	+	0	ID=cds-WP_000545426.1;Parent=gene-C9F00_RS11840;Dbxref=GenBank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9F00_RS11840;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	85320	85844	.	+	.	ID=gene-C9F00_RS11845;Name=C9F00_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11845;old_locus_tag=C9F00_12145
NZ_PYKC01000068.1	Protein Homology	CDS	85320	85844	.	+	0	ID=cds-WP_000830237.1;Parent=gene-C9F00_RS11845;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9F00_RS11845;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	85988	86629	.	+	.	ID=gene-C9F00_RS11850;Name=C9F00_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11850;old_locus_tag=C9F00_12150
NZ_PYKC01000068.1	Protein Homology	CDS	85988	86629	.	+	0	ID=cds-WP_000610827.1;Parent=gene-C9F00_RS11850;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9F00_RS11850;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	86640	86864	.	+	.	ID=gene-C9F00_RS11855;Name=C9F00_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11855;old_locus_tag=C9F00_12155
NZ_PYKC01000068.1	Protein Homology	CDS	86640	86864	.	+	0	ID=cds-WP_000737125.1;Parent=gene-C9F00_RS11855;Dbxref=GenBank:WP_000737125.1;Name=WP_000737125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9F00_RS11855;product=membrane protein;protein_id=WP_000737125.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	86922	87281	.	+	.	ID=gene-C9F00_RS11860;Name=C9F00_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11860;old_locus_tag=C9F00_12160
NZ_PYKC01000068.1	Protein Homology	CDS	86922	87281	.	+	0	ID=cds-WP_000722978.1;Parent=gene-C9F00_RS11860;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9F00_RS11860;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11
NZ_PYKC01000068.1	RefSeq	gene	87351	88421	.	-	.	ID=gene-C9F00_RS11865;Name=mdsC;end_range=88421,.;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=C9F00_RS11865;old_locus_tag=C9F00_12165;partial=true
NZ_PYKC01000068.1	Protein Homology	CDS	87351	88421	.	-	0	ID=cds-WP_135492305.1;Parent=gene-C9F00_RS11865;Dbxref=GenBank:WP_135492305.1;Name=WP_135492305.1;end_range=88421,.;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9F00_RS11865;partial=true;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_135492305.1;transl_table=11
##sequence-region NZ_PYKC01000029.1 1 23121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000029.1	RefSeq	region	1	23121	.	+	.	ID=NZ_PYKC01000029.1:1..23121;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000029.1	RefSeq	gene	92	367	.	-	.	ID=gene-C9F00_RS05185;Name=C9F00_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05185;old_locus_tag=C9F00_05270
NZ_PYKC01000029.1	Protein Homology	CDS	92	367	.	-	0	ID=cds-WP_135369479.1;Parent=gene-C9F00_RS05185;Dbxref=GenBank:WP_135369479.1;Name=WP_135369479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9F00_RS05185;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_135369479.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	885	1286	.	+	.	ID=gene-C9F00_RS05190;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9F00_RS05190;old_locus_tag=C9F00_05275
NZ_PYKC01000029.1	Protein Homology	CDS	885	1286	.	+	0	ID=cds-WP_077918060.1;Parent=gene-C9F00_RS05190;Dbxref=GenBank:WP_077918060.1;Name=WP_077918060.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9F00_RS05190;product=type III secretion system effector SteB;protein_id=WP_077918060.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	1415	2131	.	-	.	ID=gene-C9F00_RS05195;Name=C9F00_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05195;old_locus_tag=C9F00_05280
NZ_PYKC01000029.1	Protein Homology	CDS	1415	2131	.	-	0	ID=cds-WP_000997196.1;Parent=gene-C9F00_RS05195;Dbxref=GenBank:WP_000997196.1;Name=WP_000997196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9F00_RS05195;product=membrane protein;protein_id=WP_000997196.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	2557	3783	.	+	.	ID=gene-C9F00_RS05200;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9F00_RS05200;old_locus_tag=C9F00_05285
NZ_PYKC01000029.1	Protein Homology	CDS	2557	3783	.	+	0	ID=cds-WP_001131430.1;Parent=gene-C9F00_RS05200;Dbxref=GenBank:WP_001131430.1;Name=WP_001131430.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9F00_RS05200;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131430.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	3904	4248	.	-	.	ID=gene-C9F00_RS05205;Name=C9F00_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05205;old_locus_tag=C9F00_05290
NZ_PYKC01000029.1	Protein Homology	CDS	3904	4248	.	-	0	ID=cds-WP_135369473.1;Parent=gene-C9F00_RS05205;Dbxref=GenBank:WP_135369473.1;Name=WP_135369473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9F00_RS05205;product=DUF1294 domain-containing protein;protein_id=WP_135369473.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	5158	5919	.	+	.	ID=gene-C9F00_RS05210;Name=C9F00_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05210;old_locus_tag=C9F00_05295
NZ_PYKC01000029.1	Protein Homology	CDS	5158	5919	.	+	0	ID=cds-WP_135369474.1;Parent=gene-C9F00_RS05210;Dbxref=GenBank:WP_135369474.1;Name=WP_135369474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9F00_RS05210;product=transporter substrate-binding domain-containing protein;protein_id=WP_135369474.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	5926	6573	.	+	.	ID=gene-C9F00_RS05215;Name=C9F00_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05215;old_locus_tag=C9F00_05300
NZ_PYKC01000029.1	Protein Homology	CDS	5926	6573	.	+	0	ID=cds-WP_045341191.1;Parent=gene-C9F00_RS05215;Dbxref=GenBank:WP_045341191.1;Name=WP_045341191.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9F00_RS05215;product=amino acid ABC transporter permease;protein_id=WP_045341191.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	6598	7329	.	+	.	ID=gene-C9F00_RS05220;Name=C9F00_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05220;old_locus_tag=C9F00_05305
NZ_PYKC01000029.1	Protein Homology	CDS	6598	7329	.	+	0	ID=cds-WP_023194418.1;Parent=gene-C9F00_RS05220;Dbxref=GenBank:WP_023194418.1;Name=WP_023194418.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9F00_RS05220;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_023194418.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	7326	8006	.	+	.	ID=gene-C9F00_RS05225;Name=C9F00_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05225;old_locus_tag=C9F00_05310
NZ_PYKC01000029.1	Protein Homology	CDS	7326	8006	.	+	0	ID=cds-WP_000560165.1;Parent=gene-C9F00_RS05225;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9F00_RS05225;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	8143	9693	.	+	.	ID=gene-C9F00_RS05230;Name=C9F00_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05230;old_locus_tag=C9F00_05315
NZ_PYKC01000029.1	Protein Homology	CDS	8143	9693	.	+	0	ID=cds-WP_135369475.1;Parent=gene-C9F00_RS05230;Dbxref=GenBank:WP_135369475.1;Name=WP_135369475.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9F00_RS05230;product=glycosyltransferase family 39 protein;protein_id=WP_135369475.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	10157	10819	.	+	.	ID=gene-C9F00_RS05235;Name=C9F00_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05235;old_locus_tag=C9F00_05320
NZ_PYKC01000029.1	Protein Homology	CDS	10157	10819	.	+	0	ID=cds-WP_001520112.1;Parent=gene-C9F00_RS05235;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9F00_RS05235;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	11090	11620	.	-	.	ID=gene-C9F00_RS05240;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9F00_RS05240;old_locus_tag=C9F00_05325
NZ_PYKC01000029.1	Protein Homology	CDS	11090	11620	.	-	0	ID=cds-WP_000527277.1;Parent=gene-C9F00_RS05240;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9F00_RS05240;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	11737	12537	.	-	.	ID=gene-C9F00_RS05245;Name=C9F00_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05245;old_locus_tag=C9F00_05330
NZ_PYKC01000029.1	Protein Homology	CDS	11737	12537	.	-	0	ID=cds-WP_023242334.1;Parent=gene-C9F00_RS05245;Dbxref=GenBank:WP_023242334.1;Name=WP_023242334.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9F00_RS05245;product=YdcF family protein;protein_id=WP_023242334.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	12601	16503	.	-	.	ID=gene-C9F00_RS05250;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9F00_RS05250;old_locus_tag=C9F00_05335
NZ_PYKC01000029.1	Protein Homology	CDS	12601	16503	.	-	0	ID=cds-WP_135492165.1;Parent=gene-C9F00_RS05250;Dbxref=GenBank:WP_135492165.1;Name=WP_135492165.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F00_RS05250;product=ATP-dependent RNA helicase HrpA;protein_id=WP_135492165.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	16704	17309	.	+	.	ID=gene-C9F00_RS05255;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9F00_RS05255;old_locus_tag=C9F00_05340
NZ_PYKC01000029.1	Protein Homology	CDS	16704	17309	.	+	0	ID=cds-WP_000048924.1;Parent=gene-C9F00_RS05255;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9F00_RS05255;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	17314	17655	.	-	.	ID=gene-C9F00_RS05260;Name=C9F00_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05260;old_locus_tag=C9F00_05345
NZ_PYKC01000029.1	GeneMarkS-2+	CDS	17314	17655	.	-	0	ID=cds-WP_135492167.1;Parent=gene-C9F00_RS05260;Dbxref=GenBank:WP_135492167.1;Name=WP_135492167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS05260;product=hypothetical protein;protein_id=WP_135492167.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	17763	19073	.	-	.	ID=gene-C9F00_RS05265;Name=C9F00_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05265;old_locus_tag=C9F00_05350
NZ_PYKC01000029.1	Protein Homology	CDS	17763	19073	.	-	0	ID=cds-WP_023137904.1;Parent=gene-C9F00_RS05265;Dbxref=GenBank:WP_023137904.1;Name=WP_023137904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835230.1;locus_tag=C9F00_RS05265;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_023137904.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	19063	20823	.	-	.	ID=gene-C9F00_RS05270;Name=C9F00_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05270;old_locus_tag=C9F00_05355
NZ_PYKC01000029.1	Protein Homology	CDS	19063	20823	.	-	0	ID=cds-WP_135369750.1;Parent=gene-C9F00_RS05270;Dbxref=GenBank:WP_135369750.1;Name=WP_135369750.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812691.1;locus_tag=C9F00_RS05270;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_135369750.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	20798	21454	.	-	.	ID=gene-C9F00_RS05275;Name=C9F00_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05275;old_locus_tag=C9F00_05360
NZ_PYKC01000029.1	Protein Homology	CDS	20798	21454	.	-	0	ID=cds-WP_135369749.1;Parent=gene-C9F00_RS05275;Dbxref=GenBank:WP_135369749.1;Name=WP_135369749.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702890.1;locus_tag=C9F00_RS05275;product=lysophospholipid acyltransferase family protein;protein_id=WP_135369749.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	21461	22378	.	-	.	ID=gene-C9F00_RS05280;Name=C9F00_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05280;old_locus_tag=C9F00_05365
NZ_PYKC01000029.1	Protein Homology	CDS	21461	22378	.	-	0	ID=cds-WP_135369748.1;Parent=gene-C9F00_RS05280;Dbxref=GenBank:WP_135369748.1;Name=WP_135369748.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=C9F00_RS05280;product=phosphatidate cytidylyltransferase;protein_id=WP_135369748.1;transl_table=11
NZ_PYKC01000029.1	RefSeq	gene	22375	22971	.	-	.	ID=gene-C9F00_RS05285;Name=C9F00_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05285;old_locus_tag=C9F00_05370
NZ_PYKC01000029.1	Protein Homology	CDS	22375	22971	.	-	0	ID=cds-WP_135369747.1;Parent=gene-C9F00_RS05285;Dbxref=GenBank:WP_135369747.1;Name=WP_135369747.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177492.1;locus_tag=C9F00_RS05285;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_135369747.1;transl_table=11
##sequence-region NZ_PYKC01000080.1 1 1198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000080.1	RefSeq	region	1	1198	.	+	.	ID=NZ_PYKC01000080.1:1..1198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000080.1	RefSeq	pseudogene	1	233	.	-	.	ID=gene-C9F00_RS13505;Name=C9F00_RS13505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS13505;old_locus_tag=C9F00_13840;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000080.1	Protein Homology	CDS	1	233	.	-	0	ID=cds-C9F00_RS13505;Parent=gene-C9F00_RS13505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F00_RS13505;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000080.1	RefSeq	gene	540	1034	.	-	.	ID=gene-C9F00_RS13510;Name=C9F00_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS13510;old_locus_tag=C9F00_13845
NZ_PYKC01000080.1	Protein Homology	CDS	540	1034	.	-	0	ID=cds-WP_000439335.1;Parent=gene-C9F00_RS13510;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9F00_RS13510;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11
##sequence-region NZ_PYKC01000161.1 1 21925
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000161.1	RefSeq	region	1	21925	.	+	.	ID=NZ_PYKC01000161.1:1..21925;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000161.1	RefSeq	gene	1	651	.	-	.	ID=gene-C9F00_RS23365;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9F00_RS23365;old_locus_tag=C9F00_23910;partial=true;start_range=.,1
NZ_PYKC01000161.1	Protein Homology	CDS	1	651	.	-	0	ID=cds-WP_135492559.1;Parent=gene-C9F00_RS23365;Dbxref=GenBank:WP_135492559.1;Name=WP_135492559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9F00_RS23365;partial=true;product=signal peptidase I;protein_id=WP_135492559.1;start_range=.,1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	668	2467	.	-	.	ID=gene-C9F00_RS23370;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9F00_RS23370;old_locus_tag=C9F00_23915
NZ_PYKC01000161.1	Protein Homology	CDS	668	2467	.	-	0	ID=cds-WP_000790154.1;Parent=gene-C9F00_RS23370;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9F00_RS23370;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	2719	3198	.	-	.	ID=gene-C9F00_RS23380;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9F00_RS23380;old_locus_tag=C9F00_23925
NZ_PYKC01000161.1	Protein Homology	CDS	2719	3198	.	-	0	ID=cds-WP_000589088.1;Parent=gene-C9F00_RS23380;Dbxref=GenBank:WP_000589088.1;Name=WP_000589088.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9F00_RS23380;product=SoxR-reducing system protein RseC;protein_id=WP_000589088.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	3195	4151	.	-	.	ID=gene-C9F00_RS23385;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9F00_RS23385;old_locus_tag=C9F00_23930
NZ_PYKC01000161.1	Protein Homology	CDS	3195	4151	.	-	0	ID=cds-WP_000812021.1;Parent=gene-C9F00_RS23385;Dbxref=GenBank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9F00_RS23385;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	4151	4801	.	-	.	ID=gene-C9F00_RS23390;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9F00_RS23390;old_locus_tag=C9F00_23935
NZ_PYKC01000161.1	Protein Homology	CDS	4151	4801	.	-	0	ID=cds-WP_020839156.1;Parent=gene-C9F00_RS23390;Dbxref=GenBank:WP_020839156.1;Name=WP_020839156.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9F00_RS23390;product=anti-sigma-E factor RseA;protein_id=WP_020839156.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	4833	5408	.	-	.	ID=gene-C9F00_RS23395;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9F00_RS23395;old_locus_tag=C9F00_23940
NZ_PYKC01000161.1	Protein Homology	CDS	4833	5408	.	-	0	ID=cds-WP_000003307.1;Parent=gene-C9F00_RS23395;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9F00_RS23395;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	5405	5569	.	-	.	ID=gene-C9F00_RS23400;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9F00_RS23400
NZ_PYKC01000161.1	Protein Homology	CDS	5405	5569	.	-	0	ID=cds-WP_014344135.1;Parent=gene-C9F00_RS23400;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=C9F00_RS23400;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	5833	7455	.	+	.	ID=gene-C9F00_RS23410;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9F00_RS23410;old_locus_tag=C9F00_23950
NZ_PYKC01000161.1	Protein Homology	CDS	5833	7455	.	+	0	ID=cds-WP_000989184.1;Parent=gene-C9F00_RS23410;Dbxref=GenBank:WP_000989184.1;Name=WP_000989184.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9F00_RS23410;product=L-aspartate oxidase;protein_id=WP_000989184.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	7440	8177	.	-	.	ID=gene-C9F00_RS23415;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=C9F00_RS23415;old_locus_tag=C9F00_23955
NZ_PYKC01000161.1	Protein Homology	CDS	7440	8177	.	-	0	ID=cds-WP_135369048.1;Parent=gene-C9F00_RS23415;Dbxref=GenBank:WP_135369048.1;Name=WP_135369048.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9F00_RS23415;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_135369048.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	8308	9642	.	+	.	ID=gene-C9F00_RS23420;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9F00_RS23420;old_locus_tag=C9F00_23960
NZ_PYKC01000161.1	Protein Homology	CDS	8308	9642	.	+	0	ID=cds-WP_135369047.1;Parent=gene-C9F00_RS23420;Dbxref=GenBank:WP_135369047.1;Name=WP_135369047.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9F00_RS23420;product=ATP-dependent RNA helicase SrmB;protein_id=WP_135369047.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	9660	10559	.	-	.	ID=gene-C9F00_RS23425;Name=C9F00_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23425;old_locus_tag=C9F00_23965
NZ_PYKC01000161.1	Protein Homology	CDS	9660	10559	.	-	0	ID=cds-WP_001670786.1;Parent=gene-C9F00_RS23425;Dbxref=GenBank:WP_001670786.1;Name=WP_001670786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9F00_RS23425;product=LysR family transcriptional regulator;protein_id=WP_001670786.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	10662	11249	.	+	.	ID=gene-C9F00_RS23430;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9F00_RS23430;old_locus_tag=C9F00_23970
NZ_PYKC01000161.1	Protein Homology	CDS	10662	11249	.	+	0	ID=cds-WP_000188410.1;Parent=gene-C9F00_RS23430;Dbxref=GenBank:WP_000188410.1;Name=WP_000188410.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9F00_RS23430;product=cysteine/O-acetylserine transporter;protein_id=WP_000188410.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	11311	11694	.	-	.	ID=gene-C9F00_RS23435;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9F00_RS23435;old_locus_tag=C9F00_23975
NZ_PYKC01000161.1	Protein Homology	CDS	11311	11694	.	-	0	ID=cds-WP_000627811.1;Parent=gene-C9F00_RS23435;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9F00_RS23435;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	12013	12702	.	+	.	ID=gene-C9F00_RS23440;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9F00_RS23440;old_locus_tag=C9F00_23980
NZ_PYKC01000161.1	Protein Homology	CDS	12013	12702	.	+	0	ID=cds-WP_000179978.1;Parent=gene-C9F00_RS23440;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9F00_RS23440;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	12818	13855	.	-	.	ID=gene-C9F00_RS23445;Name=C9F00_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23445;old_locus_tag=C9F00_23985
NZ_PYKC01000161.1	Protein Homology	CDS	12818	13855	.	-	0	ID=cds-WP_000997368.1;Parent=gene-C9F00_RS23445;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9F00_RS23445;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	14059	14478	.	+	.	ID=gene-C9F00_RS23450;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9F00_RS23450;old_locus_tag=C9F00_23990
NZ_PYKC01000161.1	Protein Homology	CDS	14059	14478	.	+	0	ID=cds-WP_001098732.1;Parent=gene-C9F00_RS23450;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9F00_RS23450;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	14551	15231	.	+	.	ID=gene-C9F00_RS23455;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9F00_RS23455;old_locus_tag=C9F00_23995
NZ_PYKC01000161.1	Protein Homology	CDS	14551	15231	.	+	0	ID=cds-WP_000183641.1;Parent=gene-C9F00_RS23455;Dbxref=GenBank:WP_000183641.1;Name=WP_000183641.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9F00_RS23455;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183641.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	15285	17945	.	+	.	ID=gene-C9F00_RS23460;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9F00_RS23460;old_locus_tag=C9F00_24000
NZ_PYKC01000161.1	Protein Homology	CDS	15285	17945	.	+	0	ID=cds-WP_000082643.1;Parent=gene-C9F00_RS23460;Dbxref=GenBank:WP_000082643.1;Name=WP_000082643.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F00_RS23460;product=protein lysine acetyltransferase;protein_id=WP_000082643.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	18060	19415	.	+	.	ID=gene-C9F00_RS23465;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9F00_RS23465;old_locus_tag=C9F00_24005
NZ_PYKC01000161.1	Protein Homology	CDS	18060	19415	.	+	0	ID=cds-WP_000949286.1;Parent=gene-C9F00_RS23465;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9F00_RS23465;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	19458	19781	.	+	.	ID=gene-C9F00_RS23470;Name=C9F00_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23470;old_locus_tag=C9F00_24010
NZ_PYKC01000161.1	Protein Homology	CDS	19458	19781	.	+	0	ID=cds-WP_001264467.1;Parent=gene-C9F00_RS23470;Dbxref=GenBank:WP_001264467.1;Name=WP_001264467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9F00_RS23470;product=YfiM family lipoprotein;protein_id=WP_001264467.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	19778	21079	.	-	.	ID=gene-C9F00_RS23475;Name=C9F00_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23475;old_locus_tag=C9F00_24015
NZ_PYKC01000161.1	Protein Homology	CDS	19778	21079	.	-	0	ID=cds-WP_000807818.1;Parent=gene-C9F00_RS23475;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9F00_RS23475;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	21183	21638	.	-	.	ID=gene-C9F00_RS23480;Name=C9F00_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23480;old_locus_tag=C9F00_24020
NZ_PYKC01000161.1	Protein Homology	CDS	21183	21638	.	-	0	ID=cds-WP_000985653.1;Parent=gene-C9F00_RS23480;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9F00_RS23480;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11
NZ_PYKC01000161.1	RefSeq	gene	21847	21925	.	-	.	ID=gene-C9F00_RS24915;Name=rrf;end_range=21925,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F00_RS24915;partial=true
NZ_PYKC01000161.1	cmsearch	rRNA	21847	21925	.	-	.	ID=rna-C9F00_RS24915;Parent=gene-C9F00_RS24915;Dbxref=RFAM:RF00001;end_range=21925,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24915;partial=true;product=5S ribosomal RNA
NZ_PYKC01000161.1	cmsearch	exon	21847	21925	.	-	.	ID=exon-C9F00_RS24915-1;Parent=rna-C9F00_RS24915;Dbxref=RFAM:RF00001;end_range=21925,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS24915;partial=true;product=5S ribosomal RNA
##sequence-region NZ_PYKC01000170.1 1 21801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000170.1	RefSeq	region	1	21801	.	+	.	ID=NZ_PYKC01000170.1:1..21801;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000170.1	RefSeq	pseudogene	1	75	.	+	.	ID=gene-C9F00_RS23750;Name=C9F00_RS23750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23750;old_locus_tag=C9F00_24290;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000170.1	Protein Homology	CDS	1	75	.	+	0	ID=cds-C9F00_RS23750;Parent=gene-C9F00_RS23750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9F00_RS23750;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	142	678	.	+	.	ID=gene-C9F00_RS23755;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9F00_RS23755;old_locus_tag=C9F00_24295
NZ_PYKC01000170.1	Protein Homology	CDS	142	678	.	+	0	ID=cds-WP_001674712.1;Parent=gene-C9F00_RS23755;Dbxref=GenBank:WP_001674712.1;Name=WP_001674712.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9F00_RS23755;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001674712.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	682	2025	.	+	.	ID=gene-C9F00_RS23760;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9F00_RS23760;old_locus_tag=C9F00_24300
NZ_PYKC01000170.1	Protein Homology	CDS	682	2025	.	+	0	ID=cds-WP_000118732.1;Parent=gene-C9F00_RS23760;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9F00_RS23760;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	2022	3326	.	+	.	ID=gene-C9F00_RS23765;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9F00_RS23765;old_locus_tag=C9F00_24305
NZ_PYKC01000170.1	Protein Homology	CDS	2022	3326	.	+	0	ID=cds-WP_023236947.1;Parent=gene-C9F00_RS23765;Dbxref=GenBank:WP_023236947.1;Name=WP_023236947.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9F00_RS23765;product=type VI secretion system protein TssL%2C long form;protein_id=WP_023236947.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	3331	4104	.	+	.	ID=gene-C9F00_RS23770;Name=C9F00_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23770;old_locus_tag=C9F00_24310
NZ_PYKC01000170.1	Protein Homology	CDS	3331	4104	.	+	0	ID=cds-WP_107280791.1;Parent=gene-C9F00_RS23770;Dbxref=GenBank:WP_107280791.1;Name=WP_107280791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9F00_RS23770;product=Rap1a/Tai family immunity protein;protein_id=WP_107280791.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	4307	4738	.	+	.	ID=gene-C9F00_RS23775;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=C9F00_RS23775;old_locus_tag=C9F00_24320
NZ_PYKC01000170.1	Protein Homology	CDS	4307	4738	.	+	0	ID=cds-WP_000227044.1;Parent=gene-C9F00_RS23775;Dbxref=GenBank:WP_000227044.1;Name=WP_000227044.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9F00_RS23775;product=Shiga-like toxin A subunit SciR;protein_id=WP_000227044.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	4772	8641	.	+	.	ID=gene-C9F00_RS23780;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9F00_RS23780;old_locus_tag=C9F00_24325
NZ_PYKC01000170.1	Protein Homology	CDS	4772	8641	.	+	0	ID=cds-WP_001168956.1;Parent=gene-C9F00_RS23780;Dbxref=GenBank:WP_001168956.1;Name=WP_001168956.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F00_RS23780;product=Type VI secretion protein IcmF;protein_id=WP_001168956.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	8641	9408	.	+	.	ID=gene-C9F00_RS23785;Name=C9F00_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23785;old_locus_tag=C9F00_24330
NZ_PYKC01000170.1	Protein Homology	CDS	8641	9408	.	+	0	ID=cds-WP_001254127.1;Parent=gene-C9F00_RS23785;Dbxref=GenBank:WP_001254127.1;Name=WP_001254127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=C9F00_RS23785;product=TagF domain-containing protein;protein_id=WP_001254127.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	9451	9921	.	+	.	ID=gene-C9F00_RS23790;Name=C9F00_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23790;old_locus_tag=C9F00_24335
NZ_PYKC01000170.1	Protein Homology	CDS	9451	9921	.	+	0	ID=cds-WP_000528843.1;Parent=gene-C9F00_RS23790;Dbxref=GenBank:WP_000528843.1;Name=WP_000528843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9F00_RS23790;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	9906	10367	.	+	.	ID=gene-C9F00_RS23795;Name=C9F00_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23795;old_locus_tag=C9F00_24340
NZ_PYKC01000170.1	Protein Homology	CDS	9906	10367	.	+	0	ID=cds-WP_001684272.1;Parent=gene-C9F00_RS23795;Dbxref=GenBank:WP_001684272.1;Name=WP_001684272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9F00_RS23795;product=hypothetical protein;protein_id=WP_001684272.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	pseudogene	10376	10497	.	+	.	ID=gene-C9F00_RS24250;Name=C9F00_RS24250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24250;partial=true;pseudo=true;start_range=.,10376
NZ_PYKC01000170.1	Protein Homology	CDS	10376	10497	.	+	0	ID=cds-C9F00_RS24250;Parent=gene-C9F00_RS24250;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=C9F00_RS24250;partial=true;product=TagF domain-containing protein;pseudo=true;start_range=.,10376;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	10494	10910	.	+	.	ID=gene-C9F00_RS23800;Name=C9F00_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23800;old_locus_tag=C9F00_24345
NZ_PYKC01000170.1	Protein Homology	CDS	10494	10910	.	+	0	ID=cds-WP_023227777.1;Parent=gene-C9F00_RS23800;Dbxref=GenBank:WP_023227777.1;Name=WP_023227777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9F00_RS23800;product=DUF2195 family protein;protein_id=WP_023227777.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	10934	11455	.	+	.	ID=gene-C9F00_RS23805;Name=C9F00_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23805;old_locus_tag=C9F00_24350
NZ_PYKC01000170.1	Protein Homology	CDS	10934	11455	.	+	0	ID=cds-WP_023994364.1;Parent=gene-C9F00_RS23805;Dbxref=GenBank:WP_023994364.1;Name=WP_023994364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9F00_RS23805;product=DUF2778 domain-containing protein;protein_id=WP_023994364.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	pseudogene	11852	14086	.	+	.	ID=gene-C9F00_RS23810;Name=C9F00_RS23810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23810;old_locus_tag=C9F00_24360;pseudo=true
NZ_PYKC01000170.1	Protein Homology	CDS	11852	14086	.	+	0	ID=cds-C9F00_RS23810;Parent=gene-C9F00_RS23810;Note=internal stop;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=C9F00_RS23810;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	14146	14604	.	+	.	ID=gene-C9F00_RS23815;Name=C9F00_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23815;old_locus_tag=C9F00_24365
NZ_PYKC01000170.1	Protein Homology	CDS	14146	14604	.	+	0	ID=cds-WP_000186514.1;Parent=gene-C9F00_RS23815;Dbxref=GenBank:WP_000186514.1;Name=WP_000186514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=C9F00_RS23815;product=DcrB-related protein;protein_id=WP_000186514.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	14620	19263	.	+	.	ID=gene-C9F00_RS24155;Name=C9F00_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24155
NZ_PYKC01000170.1	Protein Homology	CDS	14620	19263	.	+	0	ID=cds-WP_167850727.1;Parent=gene-C9F00_RS24155;Dbxref=GenBank:WP_167850727.1;Name=WP_167850727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=C9F00_RS24155;product=RHS repeat-associated core domain-containing protein;protein_id=WP_167850727.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	19260	19706	.	+	.	ID=gene-C9F00_RS23825;Name=C9F00_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23825;old_locus_tag=C9F00_24375
NZ_PYKC01000170.1	Protein Homology	CDS	19260	19706	.	+	0	ID=cds-WP_000171102.1;Parent=gene-C9F00_RS23825;Dbxref=GenBank:WP_000171102.1;Name=WP_000171102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9F00_RS23825;product=hypothetical protein;protein_id=WP_000171102.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	pseudogene	19844	20015	.	+	.	ID=gene-C9F00_RS24940;Name=C9F00_RS24940;end_range=20015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24940;partial=true;pseudo=true;start_range=.,19844
NZ_PYKC01000170.1	Protein Homology	CDS	19844	20015	.	+	0	ID=cds-C9F00_RS24940;Parent=gene-C9F00_RS24940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=20015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9F00_RS24940;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,19844;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	20299	20799	.	+	.	ID=gene-C9F00_RS23830;Name=C9F00_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23830;old_locus_tag=C9F00_24380
NZ_PYKC01000170.1	Protein Homology	CDS	20299	20799	.	+	0	ID=cds-WP_080110572.1;Parent=gene-C9F00_RS23830;Dbxref=GenBank:WP_080110572.1;Name=WP_080110572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232789.1;locus_tag=C9F00_RS23830;product=hypothetical protein;protein_id=WP_080110572.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	gene	20838	21029	.	-	.	ID=gene-C9F00_RS23835;Name=C9F00_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS23835;old_locus_tag=C9F00_24385
NZ_PYKC01000170.1	Protein Homology	CDS	20838	21029	.	-	0	ID=cds-WP_077942161.1;Parent=gene-C9F00_RS23835;Dbxref=GenBank:WP_077942161.1;Name=WP_077942161.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9F00_RS23835;product=SymE family type I addiction module toxin;protein_id=WP_077942161.1;transl_table=11
NZ_PYKC01000170.1	RefSeq	pseudogene	21023	21801	.	+	.	ID=gene-C9F00_RS23840;Name=C9F00_RS23840;end_range=21801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS23840;old_locus_tag=C9F00_24390;partial=true;pseudo=true;start_range=.,21023
NZ_PYKC01000170.1	Protein Homology	CDS	21023	21801	.	+	0	ID=cds-C9F00_RS23840;Parent=gene-C9F00_RS23840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=21801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9F00_RS23840;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,21023;transl_table=11
##sequence-region NZ_PYKC01000151.1 1 21796
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000151.1	RefSeq	region	1	21796	.	+	.	ID=NZ_PYKC01000151.1:1..21796;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000151.1	RefSeq	pseudogene	91	1074	.	-	.	ID=gene-C9F00_RS22310;Name=C9F00_RS22310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS22310;old_locus_tag=C9F00_22835;partial=true;pseudo=true;start_range=.,91
NZ_PYKC01000151.1	Protein Homology	CDS	91	1074	.	-	0	ID=cds-C9F00_RS22310;Parent=gene-C9F00_RS22310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9F00_RS22310;partial=true;product=MFS transporter;pseudo=true;start_range=.,91;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	1250	2041	.	+	.	ID=gene-C9F00_RS22315;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9F00_RS22315;old_locus_tag=C9F00_22840
NZ_PYKC01000151.1	Protein Homology	CDS	1250	2041	.	+	0	ID=cds-WP_001262195.1;Parent=gene-C9F00_RS22315;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9F00_RS22315;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	2253	2492	.	-	.	ID=gene-C9F00_RS22320;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9F00_RS22320;old_locus_tag=C9F00_22845
NZ_PYKC01000151.1	Protein Homology	CDS	2253	2492	.	-	0	ID=cds-WP_001236776.1;Parent=gene-C9F00_RS22320;Dbxref=GenBank:WP_001236776.1;Name=WP_001236776.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9F00_RS22320;product=invasion protein YobH;protein_id=WP_001236776.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	2650	2793	.	+	.	ID=gene-C9F00_RS22325;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9F00_RS22325;old_locus_tag=C9F00_22850
NZ_PYKC01000151.1	Protein Homology	CDS	2650	2793	.	+	0	ID=cds-WP_000714547.1;Parent=gene-C9F00_RS22325;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9F00_RS22325;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	2864	3151	.	+	.	ID=gene-C9F00_RS22330;Name=C9F00_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22330;old_locus_tag=C9F00_22855
NZ_PYKC01000151.1	Protein Homology	CDS	2864	3151	.	+	0	ID=cds-WP_001000660.1;Parent=gene-C9F00_RS22330;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9F00_RS22330;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	3800	3970	.	+	.	ID=gene-C9F00_RS22335;Name=C9F00_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22335;old_locus_tag=C9F00_22860
NZ_PYKC01000151.1	Protein Homology	CDS	3800	3970	.	+	0	ID=cds-WP_135369514.1;Parent=gene-C9F00_RS22335;Dbxref=GenBank:WP_135369514.1;Name=WP_135369514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9F00_RS22335;product=DUF2627 domain-containing protein;protein_id=WP_135369514.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	3957	4166	.	+	.	ID=gene-C9F00_RS22340;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F00_RS22340;old_locus_tag=C9F00_22865
NZ_PYKC01000151.1	Protein Homology	CDS	3957	4166	.	+	0	ID=cds-WP_001062678.1;Parent=gene-C9F00_RS22340;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9F00_RS22340;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	4386	6131	.	+	.	ID=gene-C9F00_RS22345;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9F00_RS22345;old_locus_tag=C9F00_22870
NZ_PYKC01000151.1	Protein Homology	CDS	4386	6131	.	+	0	ID=cds-WP_000730322.1;Parent=gene-C9F00_RS22345;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9F00_RS22345;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	6197	7006	.	+	.	ID=gene-C9F00_RS22350;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9F00_RS22350;old_locus_tag=C9F00_22875
NZ_PYKC01000151.1	Protein Homology	CDS	6197	7006	.	+	0	ID=cds-WP_000010923.1;Parent=gene-C9F00_RS22350;Dbxref=GenBank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9F00_RS22350;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	7003	7569	.	-	.	ID=gene-C9F00_RS22355;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9F00_RS22355;old_locus_tag=C9F00_22880
NZ_PYKC01000151.1	Protein Homology	CDS	7003	7569	.	-	0	ID=cds-WP_001518359.1;Parent=gene-C9F00_RS22355;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9F00_RS22355;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11
NZ_PYKC01000151.1	cmsearch	riboswitch	7681	7782	.	-	.	ID=id-NZ_PYKC01000151.1:7681..7782;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKC01000151.1	RefSeq	gene	7979	8437	.	-	.	ID=gene-C9F00_RS22360;Name=C9F00_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22360;old_locus_tag=C9F00_22890
NZ_PYKC01000151.1	Protein Homology	CDS	7979	8437	.	-	0	ID=cds-WP_000156280.1;Parent=gene-C9F00_RS22360;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9F00_RS22360;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	8496	9347	.	-	.	ID=gene-C9F00_RS22365;Name=C9F00_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22365;old_locus_tag=C9F00_22895
NZ_PYKC01000151.1	Protein Homology	CDS	8496	9347	.	-	0	ID=cds-WP_001518647.1;Parent=gene-C9F00_RS22365;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9F00_RS22365;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	9360	10160	.	-	.	ID=gene-C9F00_RS22370;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9F00_RS22370;old_locus_tag=C9F00_22900
NZ_PYKC01000151.1	Protein Homology	CDS	9360	10160	.	-	0	ID=cds-WP_000406920.1;Parent=gene-C9F00_RS22370;Dbxref=GenBank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9F00_RS22370;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	10213	11181	.	-	.	ID=gene-C9F00_RS22375;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9F00_RS22375;old_locus_tag=C9F00_22905
NZ_PYKC01000151.1	Protein Homology	CDS	10213	11181	.	-	0	ID=cds-WP_000150521.1;Parent=gene-C9F00_RS22375;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9F00_RS22375;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	11499	11666	.	+	.	ID=gene-C9F00_RS24890;Name=C9F00_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24890
NZ_PYKC01000151.1	Protein Homology	CDS	11499	11666	.	+	0	ID=cds-WP_371061794.1;Parent=gene-C9F00_RS24890;Dbxref=GenBank:WP_371061794.1;Name=WP_371061794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=C9F00_RS24890;product=protein YoaL;protein_id=WP_371061794.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	11654	13213	.	+	.	ID=gene-C9F00_RS22380;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=C9F00_RS22380;old_locus_tag=C9F00_22915
NZ_PYKC01000151.1	Protein Homology	CDS	11654	13213	.	+	0	ID=cds-WP_000421820.1;Parent=gene-C9F00_RS22380;Dbxref=GenBank:WP_000421820.1;Name=WP_000421820.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9F00_RS22380;product=CNNM family cation transport protein YoaE;protein_id=WP_000421820.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	13235	14836	.	-	.	ID=gene-C9F00_RS22385;Name=C9F00_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22385;old_locus_tag=C9F00_22920
NZ_PYKC01000151.1	Protein Homology	CDS	13235	14836	.	-	0	ID=cds-WP_001192535.1;Parent=gene-C9F00_RS22385;Dbxref=GenBank:WP_001192535.1;Name=WP_001192535.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9F00_RS22385;product=EAL domain-containing protein;protein_id=WP_001192535.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	14974	16338	.	-	.	ID=gene-C9F00_RS22390;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9F00_RS22390;old_locus_tag=C9F00_22925
NZ_PYKC01000151.1	Protein Homology	CDS	14974	16338	.	-	0	ID=cds-WP_000624277.1;Parent=gene-C9F00_RS22390;Dbxref=GenBank:WP_000624277.1;Name=WP_000624277.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9F00_RS22390;product=L-serine ammonia-lyase;protein_id=WP_000624277.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	16602	17180	.	-	.	ID=gene-C9F00_RS22395;Name=C9F00_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22395;old_locus_tag=C9F00_22930
NZ_PYKC01000151.1	Protein Homology	CDS	16602	17180	.	-	0	ID=cds-WP_000381544.1;Parent=gene-C9F00_RS22395;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9F00_RS22395;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	17184	18548	.	-	.	ID=gene-C9F00_RS22400;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F00_RS22400;old_locus_tag=C9F00_22935
NZ_PYKC01000151.1	Protein Homology	CDS	17184	18548	.	-	0	ID=cds-WP_079980658.1;Parent=gene-C9F00_RS22400;Dbxref=GenBank:WP_079980658.1;Name=WP_079980658.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9F00_RS22400;product=aminodeoxychorismate synthase component 1;protein_id=WP_079980658.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	18629	18808	.	+	.	ID=gene-C9F00_RS22405;Name=C9F00_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22405;old_locus_tag=C9F00_22940
NZ_PYKC01000151.1	Protein Homology	CDS	18629	18808	.	+	0	ID=cds-WP_000457328.1;Parent=gene-C9F00_RS22405;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9F00_RS22405;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	18814	19158	.	-	.	ID=gene-C9F00_RS22410;Name=C9F00_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22410;old_locus_tag=C9F00_22945
NZ_PYKC01000151.1	Protein Homology	CDS	18814	19158	.	-	0	ID=cds-WP_135492534.1;Parent=gene-C9F00_RS22410;Dbxref=GenBank:WP_135492534.1;Name=WP_135492534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9F00_RS22410;product=RidA family protein;protein_id=WP_135492534.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	19289	21199	.	+	.	ID=gene-C9F00_RS22415;Name=C9F00_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS22415;old_locus_tag=C9F00_22950
NZ_PYKC01000151.1	Protein Homology	CDS	19289	21199	.	+	0	ID=cds-WP_000128807.1;Parent=gene-C9F00_RS22415;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9F00_RS22415;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11
NZ_PYKC01000151.1	RefSeq	gene	21257	21796	.	+	.	ID=gene-C9F00_RS22420;Name=tsaB;end_range=21796,.;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9F00_RS22420;old_locus_tag=C9F00_22955;partial=true
NZ_PYKC01000151.1	Protein Homology	CDS	21257	21796	.	+	0	ID=cds-WP_135492536.1;Parent=gene-C9F00_RS22420;Dbxref=GenBank:WP_135492536.1;Name=WP_135492536.1;Ontology_term=GO:0002949;end_range=21796,.;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9F00_RS22420;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_135492536.1;transl_table=11
##sequence-region NZ_PYKC01000109.1 1 21679
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000109.1	RefSeq	region	1	21679	.	+	.	ID=NZ_PYKC01000109.1:1..21679;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000109.1	RefSeq	pseudogene	1	237	.	-	.	ID=gene-C9F00_RS24860;Name=C9F00_RS24860;end_range=237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24860;old_locus_tag=C9F00_17540;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000109.1	Protein Homology	CDS	1	237	.	-	0	ID=cds-C9F00_RS24860;Parent=gene-C9F00_RS24860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0000160;end_range=237,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884142.1;locus_tag=C9F00_RS24860;partial=true;product=response regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000109.1	RefSeq	pseudogene	212	505	.	-	.	ID=gene-C9F00_RS24865;Name=C9F00_RS24865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24865;old_locus_tag=C9F00_17545;partial=true;pseudo=true;start_range=.,212
NZ_PYKC01000109.1	Protein Homology	CDS	212	505	.	-	0	ID=cds-C9F00_RS24865;Parent=gene-C9F00_RS24865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9F00_RS24865;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,212;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	495	1469	.	-	.	ID=gene-C9F00_RS17125;Name=C9F00_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17125;old_locus_tag=C9F00_17550
NZ_PYKC01000109.1	Protein Homology	CDS	495	1469	.	-	0	ID=cds-WP_001748353.1;Parent=gene-C9F00_RS17125;Dbxref=GenBank:WP_001748353.1;Name=WP_001748353.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9F00_RS17125;product=ABC transporter permease;protein_id=WP_001748353.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	1469	3103	.	-	.	ID=gene-C9F00_RS17130;Name=C9F00_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17130;old_locus_tag=C9F00_17555
NZ_PYKC01000109.1	Protein Homology	CDS	1469	3103	.	-	0	ID=cds-WP_077942330.1;Parent=gene-C9F00_RS17130;Dbxref=GenBank:WP_077942330.1;Name=WP_077942330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9F00_RS17130;product=ABC transporter substrate-binding protein;protein_id=WP_077942330.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	3785	4099	.	+	.	ID=gene-C9F00_RS17135;Name=C9F00_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17135;old_locus_tag=C9F00_17560
NZ_PYKC01000109.1	Protein Homology	CDS	3785	4099	.	+	0	ID=cds-WP_000182479.1;Parent=gene-C9F00_RS17135;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9F00_RS17135;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	4248	4778	.	+	.	ID=gene-C9F00_RS17140;Name=C9F00_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17140;old_locus_tag=C9F00_17565
NZ_PYKC01000109.1	Protein Homology	CDS	4248	4778	.	+	0	ID=cds-WP_000929980.1;Parent=gene-C9F00_RS17140;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9F00_RS17140;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	4860	5903	.	-	.	ID=gene-C9F00_RS17145;Name=C9F00_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17145;old_locus_tag=C9F00_17570
NZ_PYKC01000109.1	Protein Homology	CDS	4860	5903	.	-	0	ID=cds-WP_135369591.1;Parent=gene-C9F00_RS17145;Dbxref=GenBank:WP_135369591.1;Name=WP_135369591.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9F00_RS17145;product=sialidase family protein;protein_id=WP_135369591.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	6242	6709	.	-	.	ID=gene-C9F00_RS17150;Name=C9F00_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17150;old_locus_tag=C9F00_17575
NZ_PYKC01000109.1	Protein Homology	CDS	6242	6709	.	-	0	ID=cds-WP_001218120.1;Parent=gene-C9F00_RS17150;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9F00_RS17150;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	6861	7133	.	-	.	ID=gene-C9F00_RS17155;Name=C9F00_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17155;old_locus_tag=C9F00_17580
NZ_PYKC01000109.1	Protein Homology	CDS	6861	7133	.	-	0	ID=cds-WP_135369590.1;Parent=gene-C9F00_RS17155;Dbxref=GenBank:WP_135369590.1;Name=WP_135369590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9F00_RS17155;product=hypothetical protein;protein_id=WP_135369590.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	7836	8180	.	+	.	ID=gene-C9F00_RS17165;Name=C9F00_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17165;old_locus_tag=C9F00_17590
NZ_PYKC01000109.1	Protein Homology	CDS	7836	8180	.	+	0	ID=cds-WP_000977725.1;Parent=gene-C9F00_RS17165;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9F00_RS17165;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	8935	9011	.	-	.	ID=gene-C9F00_RS17170;Name=C9F00_RS17170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS17170;old_locus_tag=C9F00_17595
NZ_PYKC01000109.1	tRNAscan-SE	tRNA	8935	9011	.	-	.	ID=rna-C9F00_RS17170;Parent=gene-C9F00_RS17170;anticodon=(pos:complement(8975..8977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17170;product=tRNA-Arg
NZ_PYKC01000109.1	tRNAscan-SE	exon	8935	9011	.	-	.	ID=exon-C9F00_RS17170-1;Parent=rna-C9F00_RS17170;anticodon=(pos:complement(8975..8977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS17170;product=tRNA-Arg
NZ_PYKC01000109.1	RefSeq	gene	9402	9959	.	-	.	ID=gene-C9F00_RS17175;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9F00_RS17175;old_locus_tag=C9F00_17600
NZ_PYKC01000109.1	Protein Homology	CDS	9402	9959	.	-	0	ID=cds-WP_023226910.1;Parent=gene-C9F00_RS17175;Dbxref=GenBank:WP_023226910.1;Name=WP_023226910.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9F00_RS17175;product=virulence membrane protein PagC;protein_id=WP_023226910.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	10765	11028	.	+	.	ID=gene-C9F00_RS17185;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9F00_RS17185;old_locus_tag=C9F00_17610
NZ_PYKC01000109.1	Protein Homology	CDS	10765	11028	.	+	0	ID=cds-WP_024148167.1;Parent=gene-C9F00_RS17185;Dbxref=GenBank:WP_024148167.1;Name=WP_024148167.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9F00_RS17185;product=virulence protein PagD;protein_id=WP_024148167.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	11160	11372	.	+	.	ID=gene-C9F00_RS17190;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9F00_RS17190;old_locus_tag=C9F00_17615
NZ_PYKC01000109.1	Protein Homology	CDS	11160	11372	.	+	0	ID=cds-WP_001537306.1;Parent=gene-C9F00_RS17190;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9F00_RS17190;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	11789	12310	.	+	.	ID=gene-C9F00_RS17195;Name=C9F00_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17195;old_locus_tag=C9F00_17620
NZ_PYKC01000109.1	Protein Homology	CDS	11789	12310	.	+	0	ID=cds-WP_001589112.1;Parent=gene-C9F00_RS17195;Dbxref=GenBank:WP_001589112.1;Name=WP_001589112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9F00_RS17195;product=RICIN domain-containing protein;protein_id=WP_001589112.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	12491	12730	.	+	.	ID=gene-C9F00_RS17200;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9F00_RS17200;old_locus_tag=C9F00_17625
NZ_PYKC01000109.1	Protein Homology	CDS	12491	12730	.	+	0	ID=cds-WP_000497451.1;Parent=gene-C9F00_RS17200;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9F00_RS17200;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	13220	14008	.	+	.	ID=gene-C9F00_RS17205;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=C9F00_RS17205;old_locus_tag=C9F00_17635
NZ_PYKC01000109.1	Protein Homology	CDS	13220	14008	.	+	0	ID=cds-WP_039590712.1;Parent=gene-C9F00_RS17205;Dbxref=GenBank:WP_039590712.1;Name=WP_039590712.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9F00_RS17205;product=putative envelope lipoprotein EnvF;protein_id=WP_039590712.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	14330	14542	.	+	.	ID=gene-C9F00_RS24515;Name=C9F00_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24515;old_locus_tag=C9F00_17640
NZ_PYKC01000109.1	Protein Homology	CDS	14330	14542	.	+	0	ID=cds-WP_135369589.1;Parent=gene-C9F00_RS24515;Dbxref=GenBank:WP_135369589.1;Name=WP_135369589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787630.1;locus_tag=C9F00_RS24515;product=hypothetical protein;protein_id=WP_135369589.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	pseudogene	15193	15375	.	+	.	ID=gene-C9F00_RS17220;Name=C9F00_RS17220;end_range=15375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17220;old_locus_tag=C9F00_17650;partial=true;pseudo=true
NZ_PYKC01000109.1	Protein Homology	CDS	15193	15375	.	+	0	ID=cds-C9F00_RS17220;Parent=gene-C9F00_RS17220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539657.1;locus_tag=C9F00_RS17220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000109.1	RefSeq	pseudogene	15482	15547	.	-	.	ID=gene-C9F00_RS24870;Name=C9F00_RS24870;end_range=15547,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24870;partial=true;pseudo=true;start_range=.,15482
NZ_PYKC01000109.1	Protein Homology	CDS	15482	15547	.	-	0	ID=cds-C9F00_RS24870;Parent=gene-C9F00_RS24870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=15547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=C9F00_RS24870;partial=true;product=phage tail protein;pseudo=true;start_range=.,15482;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	15668	16792	.	-	.	ID=gene-C9F00_RS17225;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9F00_RS17225;old_locus_tag=C9F00_17660
NZ_PYKC01000109.1	Protein Homology	CDS	15668	16792	.	-	0	ID=cds-WP_135369588.1;Parent=gene-C9F00_RS17225;Dbxref=GenBank:WP_135369588.1;Name=WP_135369588.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9F00_RS17225;product=type III secretion system effector SopF;protein_id=WP_135369588.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	pseudogene	17252	17419	.	-	.	ID=gene-C9F00_RS17230;Name=C9F00_RS17230;end_range=17419,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17230;old_locus_tag=C9F00_17665;partial=true;pseudo=true
NZ_PYKC01000109.1	Protein Homology	CDS	17252	17419	.	-	0	ID=cds-C9F00_RS17230;Parent=gene-C9F00_RS17230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;end_range=17419,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F00_RS17230;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	17718	18389	.	+	.	ID=gene-C9F00_RS17235;Name=C9F00_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17235;old_locus_tag=C9F00_17670
NZ_PYKC01000109.1	Protein Homology	CDS	17718	18389	.	+	0	ID=cds-WP_134949632.1;Parent=gene-C9F00_RS17235;Dbxref=GenBank:WP_134949632.1;Name=WP_134949632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807727.1;locus_tag=C9F00_RS17235;product=SOS response-associated peptidase;protein_id=WP_134949632.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	18408	18878	.	+	.	ID=gene-C9F00_RS17240;Name=C9F00_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17240;old_locus_tag=C9F00_17675
NZ_PYKC01000109.1	Protein Homology	CDS	18408	18878	.	+	0	ID=cds-WP_134949631.1;Parent=gene-C9F00_RS17240;Dbxref=GenBank:WP_134949631.1;Name=WP_134949631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000374058.1;locus_tag=C9F00_RS17240;product=hypothetical protein;protein_id=WP_134949631.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	18851	20119	.	-	.	ID=gene-C9F00_RS17245;Name=C9F00_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17245;old_locus_tag=C9F00_17680
NZ_PYKC01000109.1	Protein Homology	CDS	18851	20119	.	-	0	ID=cds-WP_135369587.1;Parent=gene-C9F00_RS17245;Dbxref=GenBank:WP_135369587.1;Name=WP_135369587.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=C9F00_RS17245;product=Y-family DNA polymerase;protein_id=WP_135369587.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	20121	20540	.	-	.	ID=gene-C9F00_RS17250;Name=C9F00_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17250;old_locus_tag=C9F00_17685
NZ_PYKC01000109.1	Protein Homology	CDS	20121	20540	.	-	0	ID=cds-WP_080198126.1;Parent=gene-C9F00_RS17250;Dbxref=GenBank:WP_080198126.1;Name=WP_080198126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=C9F00_RS17250;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_080198126.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	20618	20860	.	+	.	ID=gene-C9F00_RS17255;Name=C9F00_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17255;old_locus_tag=C9F00_17690
NZ_PYKC01000109.1	Protein Homology	CDS	20618	20860	.	+	0	ID=cds-WP_080198125.1;Parent=gene-C9F00_RS17255;Dbxref=GenBank:WP_080198125.1;Name=WP_080198125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003840043.1;locus_tag=C9F00_RS17255;product=DinI-like family protein;protein_id=WP_080198125.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	gene	20935	21453	.	-	.	ID=gene-C9F00_RS17260;Name=C9F00_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS17260;old_locus_tag=C9F00_17695
NZ_PYKC01000109.1	Protein Homology	CDS	20935	21453	.	-	0	ID=cds-WP_080198124.1;Parent=gene-C9F00_RS17260;Dbxref=GenBank:WP_080198124.1;Name=WP_080198124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675316.1;locus_tag=C9F00_RS17260;product=tail fiber assembly protein;protein_id=WP_080198124.1;transl_table=11
NZ_PYKC01000109.1	RefSeq	pseudogene	21456	21679	.	-	.	ID=gene-C9F00_RS17265;Name=C9F00_RS17265;end_range=21679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS17265;old_locus_tag=C9F00_17700;partial=true;pseudo=true
NZ_PYKC01000109.1	Protein Homology	CDS	21456	21679	.	-	2	ID=cds-C9F00_RS17265;Parent=gene-C9F00_RS17265;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=21679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F00_RS17265;partial=true;product=phage tail protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000090.1 1 21379
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000090.1	RefSeq	region	1	21379	.	+	.	ID=NZ_PYKC01000090.1:1..21379;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000090.1	RefSeq	pseudogene	1	477	.	+	.	ID=gene-C9F00_RS14610;Name=C9F00_RS14610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS14610;old_locus_tag=C9F00_14950;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000090.1	Protein Homology	CDS	1	477	.	+	0	ID=cds-C9F00_RS14610;Parent=gene-C9F00_RS14610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9F00_RS14610;partial=true;product=glutathione-dependent formaldehyde dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	560	970	.	-	.	ID=gene-C9F00_RS14615;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9F00_RS14615;old_locus_tag=C9F00_14955
NZ_PYKC01000090.1	Protein Homology	CDS	560	970	.	-	0	ID=cds-WP_000089748.1;Parent=gene-C9F00_RS14615;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9F00_RS14615;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	1205	2011	.	-	.	ID=gene-C9F00_RS14620;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=C9F00_RS14620;old_locus_tag=C9F00_14965
NZ_PYKC01000090.1	Protein Homology	CDS	1205	2011	.	-	0	ID=cds-WP_135369417.1;Parent=gene-C9F00_RS14620;Dbxref=GenBank:WP_135369417.1;Name=WP_135369417.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9F00_RS14620;product=ribonuclease I;protein_id=WP_135369417.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	2121	3584	.	-	.	ID=gene-C9F00_RS14625;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9F00_RS14625;old_locus_tag=C9F00_14970
NZ_PYKC01000090.1	Protein Homology	CDS	2121	3584	.	-	0	ID=cds-WP_000059029.1;Parent=gene-C9F00_RS14625;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9F00_RS14625;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	3622	4518	.	-	.	ID=gene-C9F00_RS14630;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9F00_RS14630;old_locus_tag=C9F00_14975
NZ_PYKC01000090.1	Protein Homology	CDS	3622	4518	.	-	0	ID=cds-WP_000982655.1;Parent=gene-C9F00_RS14630;Dbxref=GenBank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9F00_RS14630;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	4490	5041	.	-	.	ID=gene-C9F00_RS14635;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F00_RS14635;old_locus_tag=C9F00_14980
NZ_PYKC01000090.1	Protein Homology	CDS	4490	5041	.	-	0	ID=cds-WP_135369418.1;Parent=gene-C9F00_RS14635;Dbxref=GenBank:WP_135369418.1;Name=WP_135369418.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9F00_RS14635;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369418.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	5045	6574	.	-	.	ID=gene-C9F00_RS14640;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9F00_RS14640;old_locus_tag=C9F00_14985
NZ_PYKC01000090.1	Protein Homology	CDS	5045	6574	.	-	0	ID=cds-WP_052932426.1;Parent=gene-C9F00_RS14640;Dbxref=GenBank:WP_052932426.1;Name=WP_052932426.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9F00_RS14640;product=citrate lyase subunit alpha;protein_id=WP_052932426.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	6584	7492	.	-	.	ID=gene-C9F00_RS14645;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9F00_RS14645;old_locus_tag=C9F00_14990
NZ_PYKC01000090.1	Protein Homology	CDS	6584	7492	.	-	0	ID=cds-WP_000622350.1;Parent=gene-C9F00_RS14645;Dbxref=GenBank:WP_000622350.1;Name=WP_000622350.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9F00_RS14645;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622350.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	7489	7785	.	-	.	ID=gene-C9F00_RS14650;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F00_RS14650;old_locus_tag=C9F00_14995
NZ_PYKC01000090.1	Protein Homology	CDS	7489	7785	.	-	0	ID=cds-WP_000700679.1;Parent=gene-C9F00_RS14650;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9F00_RS14650;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	7782	8858	.	-	.	ID=gene-C9F00_RS14655;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F00_RS14655;old_locus_tag=C9F00_15000
NZ_PYKC01000090.1	Protein Homology	CDS	7782	8858	.	-	0	ID=cds-WP_000467874.1;Parent=gene-C9F00_RS14655;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9F00_RS14655;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	9243	10904	.	+	.	ID=gene-C9F00_RS14660;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9F00_RS14660;old_locus_tag=C9F00_15010
NZ_PYKC01000090.1	Protein Homology	CDS	9243	10904	.	+	0	ID=cds-WP_001277836.1;Parent=gene-C9F00_RS14660;Dbxref=GenBank:WP_001277836.1;Name=WP_001277836.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9F00_RS14660;product=sensor histidine kinase DpiB;protein_id=WP_001277836.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	10873	11553	.	+	.	ID=gene-C9F00_RS14665;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F00_RS14665;old_locus_tag=C9F00_15015
NZ_PYKC01000090.1	Protein Homology	CDS	10873	11553	.	+	0	ID=cds-WP_000138788.1;Parent=gene-C9F00_RS14665;Dbxref=GenBank:WP_000138788.1;Name=WP_000138788.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9F00_RS14665;product=two-component response regulator DpiA;protein_id=WP_000138788.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	11607	12992	.	-	.	ID=gene-C9F00_RS14670;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9F00_RS14670;old_locus_tag=C9F00_15020
NZ_PYKC01000090.1	Protein Homology	CDS	11607	12992	.	-	0	ID=cds-WP_000958619.1;Parent=gene-C9F00_RS14670;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=C9F00_RS14670;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	13371	13943	.	+	.	ID=gene-C9F00_RS14675;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9F00_RS14675;old_locus_tag=C9F00_15030
NZ_PYKC01000090.1	Protein Homology	CDS	13371	13943	.	+	0	ID=cds-WP_001623090.1;Parent=gene-C9F00_RS14675;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9F00_RS14675;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	14131	14340	.	+	.	ID=gene-C9F00_RS14680;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F00_RS14680;old_locus_tag=C9F00_15035
NZ_PYKC01000090.1	Protein Homology	CDS	14131	14340	.	+	0	ID=cds-WP_000034826.1;Parent=gene-C9F00_RS14680;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=C9F00_RS14680;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	14398	14781	.	-	.	ID=gene-C9F00_RS14685;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9F00_RS14685;old_locus_tag=C9F00_15040
NZ_PYKC01000090.1	Protein Homology	CDS	14398	14781	.	-	0	ID=cds-WP_000939753.1;Parent=gene-C9F00_RS14685;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9F00_RS14685;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	14872	15660	.	+	.	ID=gene-C9F00_RS14690;Name=C9F00_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14690;old_locus_tag=C9F00_15045
NZ_PYKC01000090.1	Protein Homology	CDS	14872	15660	.	+	0	ID=cds-WP_000495776.1;Parent=gene-C9F00_RS14690;Dbxref=GenBank:WP_000495776.1;Name=WP_000495776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9F00_RS14690;product=deaminated glutathione amidase;protein_id=WP_000495776.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	15789	15992	.	+	.	ID=gene-C9F00_RS14695;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9F00_RS14695;old_locus_tag=C9F00_15050
NZ_PYKC01000090.1	Protein Homology	CDS	15789	15992	.	+	0	ID=cds-WP_000503938.1;Parent=gene-C9F00_RS14695;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9F00_RS14695;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	16078	17043	.	-	.	ID=gene-C9F00_RS14700;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9F00_RS14700;old_locus_tag=C9F00_15055
NZ_PYKC01000090.1	Protein Homology	CDS	16078	17043	.	-	0	ID=cds-WP_135492362.1;Parent=gene-C9F00_RS14700;Dbxref=GenBank:WP_135492362.1;Name=WP_135492362.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9F00_RS14700;product=lipoyl synthase;protein_id=WP_135492362.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	17249	18202	.	-	.	ID=gene-C9F00_RS14705;Name=C9F00_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14705;old_locus_tag=C9F00_15060
NZ_PYKC01000090.1	Protein Homology	CDS	17249	18202	.	-	0	ID=cds-WP_001282817.1;Parent=gene-C9F00_RS14705;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9F00_RS14705;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	18504	19145	.	-	.	ID=gene-C9F00_RS14710;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9F00_RS14710;old_locus_tag=C9F00_15065
NZ_PYKC01000090.1	Protein Homology	CDS	18504	19145	.	-	0	ID=cds-WP_000284009.1;Parent=gene-C9F00_RS14710;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9F00_RS14710;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	19245	19508	.	-	.	ID=gene-C9F00_RS14715;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9F00_RS14715;old_locus_tag=C9F00_15070
NZ_PYKC01000090.1	Protein Homology	CDS	19245	19508	.	-	0	ID=cds-WP_000850547.1;Parent=gene-C9F00_RS14715;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9F00_RS14715;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	19617	20828	.	-	.	ID=gene-C9F00_RS14720;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9F00_RS14720;old_locus_tag=C9F00_15075
NZ_PYKC01000090.1	Protein Homology	CDS	19617	20828	.	-	0	ID=cds-WP_000858711.1;Parent=gene-C9F00_RS14720;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9F00_RS14720;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11
NZ_PYKC01000090.1	RefSeq	gene	20968	21379	.	-	.	ID=gene-C9F00_RS14725;Name=C9F00_RS14725;end_range=21379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS14725;old_locus_tag=C9F00_15080;partial=true
NZ_PYKC01000090.1	Protein Homology	CDS	20968	21379	.	-	1	ID=cds-WP_245306392.1;Parent=gene-C9F00_RS14725;Dbxref=GenBank:WP_245306392.1;Name=WP_245306392.1;Ontology_term=GO:0042834;end_range=21379,.;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F00_RS14725;partial=true;product=SPOR domain-containing protein;protein_id=WP_245306392.1;transl_table=11
##sequence-region NZ_PYKC01000123.1 1 21003
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000123.1	RefSeq	region	1	21003	.	+	.	ID=NZ_PYKC01000123.1:1..21003;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000123.1	RefSeq	gene	1	1202	.	-	.	ID=gene-C9F00_RS18610;Name=C9F00_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18610;old_locus_tag=C9F00_19055;partial=true;start_range=.,1
NZ_PYKC01000123.1	Protein Homology	CDS	1	1202	.	-	0	ID=cds-WP_135492444.1;Parent=gene-C9F00_RS18610;Dbxref=GenBank:WP_135492444.1;Name=WP_135492444.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F00_RS18610;partial=true;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_135492444.1;start_range=.,1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	1199	1582	.	-	.	ID=gene-C9F00_RS18615;Name=C9F00_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18615;old_locus_tag=C9F00_19060
NZ_PYKC01000123.1	Protein Homology	CDS	1199	1582	.	-	0	ID=cds-WP_135369717.1;Parent=gene-C9F00_RS18615;Dbxref=GenBank:WP_135369717.1;Name=WP_135369717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=C9F00_RS18615;product=DUF5375 family protein;protein_id=WP_135369717.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	1579	1863	.	-	.	ID=gene-C9F00_RS18620;Name=C9F00_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18620;old_locus_tag=C9F00_19065
NZ_PYKC01000123.1	Protein Homology	CDS	1579	1863	.	-	0	ID=cds-WP_135369718.1;Parent=gene-C9F00_RS18620;Dbxref=GenBank:WP_135369718.1;Name=WP_135369718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027153.1;locus_tag=C9F00_RS18620;product=hypothetical protein;protein_id=WP_135369718.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	1895	2254	.	-	.	ID=gene-C9F00_RS18625;Name=C9F00_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18625;old_locus_tag=C9F00_19070
NZ_PYKC01000123.1	Protein Homology	CDS	1895	2254	.	-	0	ID=cds-WP_135369719.1;Parent=gene-C9F00_RS18625;Dbxref=GenBank:WP_135369719.1;Name=WP_135369719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=C9F00_RS18625;product=hypothetical protein;protein_id=WP_135369719.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	2247	2423	.	-	.	ID=gene-C9F00_RS24125;Name=C9F00_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24125
NZ_PYKC01000123.1	Protein Homology	CDS	2247	2423	.	-	0	ID=cds-WP_001118612.1;Parent=gene-C9F00_RS24125;Dbxref=GenBank:WP_001118612.1;Name=WP_001118612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=C9F00_RS24125;product=host cell division inhibitor Icd-like protein;protein_id=WP_001118612.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	2611	2796	.	+	.	ID=gene-C9F00_RS24130;Name=C9F00_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24130
NZ_PYKC01000123.1	Protein Homology	CDS	2611	2796	.	+	0	ID=cds-WP_023258407.1;Parent=gene-C9F00_RS24130;Dbxref=GenBank:WP_023258407.1;Name=WP_023258407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235891.1;locus_tag=C9F00_RS24130;product=YlcI/YnfO family protein;protein_id=WP_023258407.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	2906	3196	.	-	.	ID=gene-C9F00_RS18635;Name=C9F00_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18635;old_locus_tag=C9F00_19080
NZ_PYKC01000123.1	Protein Homology	CDS	2906	3196	.	-	0	ID=cds-WP_077950939.1;Parent=gene-C9F00_RS18635;Dbxref=GenBank:WP_077950939.1;Name=WP_077950939.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=C9F00_RS18635;product=helix-turn-helix transcriptional regulator;protein_id=WP_077950939.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	3301	4173	.	-	.	ID=gene-C9F00_RS18640;Name=C9F00_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18640;old_locus_tag=C9F00_19085
NZ_PYKC01000123.1	Protein Homology	CDS	3301	4173	.	-	0	ID=cds-WP_135419997.1;Parent=gene-C9F00_RS18640;Dbxref=GenBank:WP_135419997.1;Name=WP_135419997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078221.1;locus_tag=C9F00_RS18640;product=hypothetical protein;protein_id=WP_135419997.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	4170	5462	.	-	.	ID=gene-C9F00_RS18645;Name=C9F00_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18645;old_locus_tag=C9F00_19090
NZ_PYKC01000123.1	Protein Homology	CDS	4170	5462	.	-	0	ID=cds-WP_135369423.1;Parent=gene-C9F00_RS18645;Dbxref=GenBank:WP_135369423.1;Name=WP_135369423.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258717.1;locus_tag=C9F00_RS18645;product=tyrosine-type recombinase/integrase;protein_id=WP_135369423.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	5637	5708	.	-	.	ID=gene-C9F00_RS18650;Name=C9F00_RS18650;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS18650;old_locus_tag=C9F00_19095
NZ_PYKC01000123.1	tRNAscan-SE	tRNA	5637	5708	.	-	.	ID=rna-C9F00_RS18650;Parent=gene-C9F00_RS18650;anticodon=(pos:complement(5673..5675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18650;product=tRNA-Arg
NZ_PYKC01000123.1	tRNAscan-SE	exon	5637	5708	.	-	.	ID=exon-C9F00_RS18650-1;Parent=rna-C9F00_RS18650;anticodon=(pos:complement(5673..5675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS18650;product=tRNA-Arg
NZ_PYKC01000123.1	RefSeq	gene	5784	6725	.	-	.	ID=gene-C9F00_RS18655;Name=C9F00_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18655;old_locus_tag=C9F00_19100
NZ_PYKC01000123.1	Protein Homology	CDS	5784	6725	.	-	0	ID=cds-WP_000377772.1;Parent=gene-C9F00_RS18655;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9F00_RS18655;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	7014	7769	.	+	.	ID=gene-C9F00_RS18660;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9F00_RS18660;old_locus_tag=C9F00_19105
NZ_PYKC01000123.1	Protein Homology	CDS	7014	7769	.	+	0	ID=cds-WP_000776787.1;Parent=gene-C9F00_RS18660;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9F00_RS18660;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	7830	9137	.	-	.	ID=gene-C9F00_RS18665;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9F00_RS18665;old_locus_tag=C9F00_19110
NZ_PYKC01000123.1	Protein Homology	CDS	7830	9137	.	-	0	ID=cds-WP_001518618.1;Parent=gene-C9F00_RS18665;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9F00_RS18665;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	9508	9792	.	+	.	ID=gene-C9F00_RS18670;Name=C9F00_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18670;old_locus_tag=C9F00_19115
NZ_PYKC01000123.1	Protein Homology	CDS	9508	9792	.	+	0	ID=cds-WP_000030904.1;Parent=gene-C9F00_RS18670;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9F00_RS18670;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	9970	11280	.	+	.	ID=gene-C9F00_RS18675;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9F00_RS18675;old_locus_tag=C9F00_19120
NZ_PYKC01000123.1	Protein Homology	CDS	9970	11280	.	+	0	ID=cds-WP_135369422.1;Parent=gene-C9F00_RS18675;Dbxref=GenBank:WP_135369422.1;Name=WP_135369422.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9F00_RS18675;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_135369422.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	11280	13427	.	+	.	ID=gene-C9F00_RS18680;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9F00_RS18680;old_locus_tag=C9F00_19125
NZ_PYKC01000123.1	Protein Homology	CDS	11280	13427	.	+	0	ID=cds-WP_135369421.1;Parent=gene-C9F00_RS18680;Dbxref=GenBank:WP_135369421.1;Name=WP_135369421.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9F00_RS18680;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_135369421.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	13636	14121	.	+	.	ID=gene-C9F00_RS18685;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9F00_RS18685;old_locus_tag=C9F00_19130
NZ_PYKC01000123.1	Protein Homology	CDS	13636	14121	.	+	0	ID=cds-WP_001195800.1;Parent=gene-C9F00_RS18685;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9F00_RS18685;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	14221	14772	.	-	.	ID=gene-C9F00_RS18690;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9F00_RS18690;old_locus_tag=C9F00_19135
NZ_PYKC01000123.1	Protein Homology	CDS	14221	14772	.	-	0	ID=cds-WP_000730794.1;Parent=gene-C9F00_RS18690;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9F00_RS18690;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	14938	15870	.	+	.	ID=gene-C9F00_RS18695;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9F00_RS18695;old_locus_tag=C9F00_19140
NZ_PYKC01000123.1	Protein Homology	CDS	14938	15870	.	+	0	ID=cds-WP_001542329.1;Parent=gene-C9F00_RS18695;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9F00_RS18695;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	15906	16991	.	+	.	ID=gene-C9F00_RS18700;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9F00_RS18700;old_locus_tag=C9F00_19145
NZ_PYKC01000123.1	Protein Homology	CDS	15906	16991	.	+	0	ID=cds-WP_000918457.1;Parent=gene-C9F00_RS18700;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9F00_RS18700;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	16995	17819	.	+	.	ID=gene-C9F00_RS18705;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9F00_RS18705;old_locus_tag=C9F00_19150
NZ_PYKC01000123.1	Protein Homology	CDS	16995	17819	.	+	0	ID=cds-WP_135492446.1;Parent=gene-C9F00_RS18705;Dbxref=GenBank:WP_135492446.1;Name=WP_135492446.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9F00_RS18705;product=penicillin-insensitive murein endopeptidase;protein_id=WP_135492446.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	17819	18628	.	+	.	ID=gene-C9F00_RS18710;Name=C9F00_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18710;old_locus_tag=C9F00_19155
NZ_PYKC01000123.1	Protein Homology	CDS	17819	18628	.	+	0	ID=cds-WP_000368599.1;Parent=gene-C9F00_RS18710;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9F00_RS18710;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	18628	19176	.	+	.	ID=gene-C9F00_RS18715;Name=C9F00_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18715;old_locus_tag=C9F00_19160
NZ_PYKC01000123.1	Protein Homology	CDS	18628	19176	.	+	0	ID=cds-WP_001066345.1;Parent=gene-C9F00_RS18715;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9F00_RS18715;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	gene	19209	19484	.	+	.	ID=gene-C9F00_RS18720;Name=C9F00_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18720;old_locus_tag=C9F00_19165
NZ_PYKC01000123.1	Protein Homology	CDS	19209	19484	.	+	0	ID=cds-WP_000559749.1;Parent=gene-C9F00_RS18720;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9F00_RS18720;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11
NZ_PYKC01000123.1	RefSeq	pseudogene	19536	20960	.	-	.	ID=gene-C9F00_RS18725;Name=mnmC;end_range=20960,.;gbkey=Gene;gene=mnmC;gene_biotype=pseudogene;locus_tag=C9F00_RS18725;old_locus_tag=C9F00_19170;partial=true;pseudo=true
NZ_PYKC01000123.1	Protein Homology	CDS	19536	20960	.	-	0	ID=cds-C9F00_RS18725;Parent=gene-C9F00_RS18725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:0016645;end_range=20960,.;gbkey=CDS;gene=mnmC;go_function=methyltransferase activity|0008168||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158695.1;locus_tag=C9F00_RS18725;partial=true;product=FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000024.1 1 330
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000024.1	RefSeq	region	1	330	.	+	.	ID=NZ_PYKC01000024.1:1..330;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000024.1	RefSeq	gene	1	330	.	+	.	ID=gene-C9F00_RS04535;Name=C9F00_RS04535;end_range=330,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04535;old_locus_tag=C9F00_04605;partial=true;start_range=.,1
NZ_PYKC01000024.1	Protein Homology	CDS	1	330	.	+	2	ID=cds-WP_135492143.1;Parent=gene-C9F00_RS04535;Dbxref=GenBank:WP_135492143.1;Name=WP_135492143.1;end_range=330,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F00_RS04535;partial=true;product=Ig-like domain-containing protein;protein_id=WP_135492143.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKC01000128.1 1 20739
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000128.1	RefSeq	region	1	20739	.	+	.	ID=NZ_PYKC01000128.1:1..20739;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000128.1	RefSeq	gene	1	806	.	+	.	ID=gene-C9F00_RS19310;Name=C9F00_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19310;old_locus_tag=C9F00_19765;partial=true;start_range=.,1
NZ_PYKC01000128.1	Protein Homology	CDS	1	806	.	+	2	ID=cds-WP_135492456.1;Parent=gene-C9F00_RS19310;Dbxref=GenBank:WP_135492456.1;Name=WP_135492456.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F00_RS19310;partial=true;product=ATP-dependent nuclease;protein_id=WP_135492456.1;start_range=.,1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	803	1753	.	-	.	ID=gene-C9F00_RS19315;Name=C9F00_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19315;old_locus_tag=C9F00_19770
NZ_PYKC01000128.1	Protein Homology	CDS	803	1753	.	-	0	ID=cds-WP_001537300.1;Parent=gene-C9F00_RS19315;Dbxref=GenBank:WP_001537300.1;Name=WP_001537300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9F00_RS19315;product=VirK/YbjX family protein;protein_id=WP_001537300.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	1899	3017	.	+	.	ID=gene-C9F00_RS19320;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=C9F00_RS19320;old_locus_tag=C9F00_19775
NZ_PYKC01000128.1	Protein Homology	CDS	1899	3017	.	+	0	ID=cds-WP_001201750.1;Parent=gene-C9F00_RS19320;Dbxref=GenBank:WP_001201750.1;Name=WP_001201750.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9F00_RS19320;product=macrolide transporter subunit MacA;protein_id=WP_001201750.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	3014	4960	.	+	.	ID=gene-C9F00_RS19325;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9F00_RS19325;old_locus_tag=C9F00_19780
NZ_PYKC01000128.1	Protein Homology	CDS	3014	4960	.	+	0	ID=cds-WP_135492458.1;Parent=gene-C9F00_RS19325;Dbxref=GenBank:WP_135492458.1;Name=WP_135492458.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9F00_RS19325;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_135492458.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	pseudogene	5093	5311	.	-	.	ID=gene-C9F00_RS19335;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=pseudogene;locus_tag=C9F00_RS19335;old_locus_tag=C9F00_19790;partial=true;pseudo=true;start_range=.,5093
NZ_PYKC01000128.1	Protein Homology	CDS	5093	5311	.	-	0	ID=cds-C9F00_RS19335;Parent=gene-C9F00_RS19335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9F00_RS19335;partial=true;product=cold shock-like protein CspD;pseudo=true;start_range=.,5093;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	5462	5539	.	+	.	ID=gene-C9F00_RS24555;Name=C9F00_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24555
NZ_PYKC01000128.1	Protein Homology	CDS	5462	5539	.	+	0	ID=cds-WP_212742690.1;Parent=gene-C9F00_RS24555;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9F00_RS24555;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	5635	5955	.	+	.	ID=gene-C9F00_RS19340;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9F00_RS19340;old_locus_tag=C9F00_19795
NZ_PYKC01000128.1	Protein Homology	CDS	5635	5955	.	+	0	ID=cds-WP_000520789.1;Parent=gene-C9F00_RS19340;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9F00_RS19340;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	5986	8262	.	+	.	ID=gene-C9F00_RS19345;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9F00_RS19345;old_locus_tag=C9F00_19800
NZ_PYKC01000128.1	Protein Homology	CDS	5986	8262	.	+	0	ID=cds-WP_000934064.1;Parent=gene-C9F00_RS19345;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F00_RS19345;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	8451	8538	.	-	.	ID=gene-C9F00_RS19350;Name=C9F00_RS19350;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS19350;old_locus_tag=C9F00_19805
NZ_PYKC01000128.1	tRNAscan-SE	tRNA	8451	8538	.	-	.	ID=rna-C9F00_RS19350;Parent=gene-C9F00_RS19350;anticodon=(pos:complement(8502..8504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS19350;product=tRNA-Ser
NZ_PYKC01000128.1	tRNAscan-SE	exon	8451	8538	.	-	.	ID=exon-C9F00_RS19350-1;Parent=rna-C9F00_RS19350;anticodon=(pos:complement(8502..8504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS19350;product=tRNA-Ser
NZ_PYKC01000128.1	RefSeq	gene	8686	9363	.	-	.	ID=gene-C9F00_RS19355;Name=C9F00_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19355;old_locus_tag=C9F00_19810
NZ_PYKC01000128.1	Protein Homology	CDS	8686	9363	.	-	0	ID=cds-WP_000097893.1;Parent=gene-C9F00_RS19355;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9F00_RS19355;product=hydrolase;protein_id=WP_000097893.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	9383	10243	.	-	.	ID=gene-C9F00_RS19360;Name=C9F00_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19360;old_locus_tag=C9F00_19815
NZ_PYKC01000128.1	Protein Homology	CDS	9383	10243	.	-	0	ID=cds-WP_000809969.1;Parent=gene-C9F00_RS19360;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9F00_RS19360;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	10352	11263	.	+	.	ID=gene-C9F00_RS19365;Name=C9F00_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS19365;old_locus_tag=C9F00_19820
NZ_PYKC01000128.1	Protein Homology	CDS	10352	11263	.	+	0	ID=cds-WP_000597928.1;Parent=gene-C9F00_RS19365;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9F00_RS19365;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	11354	11572	.	-	.	ID=gene-C9F00_RS19370;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9F00_RS19370;old_locus_tag=C9F00_19825
NZ_PYKC01000128.1	Protein Homology	CDS	11354	11572	.	-	0	ID=cds-WP_001040187.1;Parent=gene-C9F00_RS19370;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9F00_RS19370;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	11884	12588	.	-	.	ID=gene-C9F00_RS19380;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9F00_RS19380;old_locus_tag=C9F00_19835
NZ_PYKC01000128.1	Protein Homology	CDS	11884	12588	.	-	0	ID=cds-WP_023218059.1;Parent=gene-C9F00_RS19380;Dbxref=GenBank:WP_023218059.1;Name=WP_023218059.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9F00_RS19380;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_023218059.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	12633	14354	.	-	.	ID=gene-C9F00_RS19385;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9F00_RS19385;old_locus_tag=C9F00_19840
NZ_PYKC01000128.1	Protein Homology	CDS	12633	14354	.	-	0	ID=cds-WP_001202257.1;Parent=gene-C9F00_RS19385;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9F00_RS19385;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	14355	16121	.	-	.	ID=gene-C9F00_RS19390;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9F00_RS19390;old_locus_tag=C9F00_19845
NZ_PYKC01000128.1	Protein Homology	CDS	14355	16121	.	-	0	ID=cds-WP_001044545.1;Parent=gene-C9F00_RS19390;Dbxref=GenBank:WP_001044545.1;Name=WP_001044545.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9F00_RS19390;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044545.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	16235	17203	.	-	.	ID=gene-C9F00_RS19395;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9F00_RS19395;old_locus_tag=C9F00_19850
NZ_PYKC01000128.1	Protein Homology	CDS	16235	17203	.	-	0	ID=cds-WP_000537407.1;Parent=gene-C9F00_RS19395;Dbxref=GenBank:WP_000537407.1;Name=WP_000537407.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9F00_RS19395;product=thioredoxin-disulfide reductase;protein_id=WP_000537407.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	17750	18244	.	+	.	ID=gene-C9F00_RS19400;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9F00_RS19400;old_locus_tag=C9F00_19860
NZ_PYKC01000128.1	Protein Homology	CDS	17750	18244	.	+	0	ID=cds-WP_000228469.1;Parent=gene-C9F00_RS19400;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9F00_RS19400;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11
NZ_PYKC01000128.1	RefSeq	gene	18379	20739	.	+	.	ID=gene-C9F00_RS19405;Name=ftsK;end_range=20739,.;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=C9F00_RS19405;old_locus_tag=C9F00_19865;partial=true
NZ_PYKC01000128.1	Protein Homology	CDS	18379	20739	.	+	0	ID=cds-WP_135420353.1;Parent=gene-C9F00_RS19405;Dbxref=GenBank:WP_135420353.1;Name=WP_135420353.1;Ontology_term=GO:0003677,GO:0005524;end_range=20739,.;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F00_RS19405;partial=true;product=DNA translocase FtsK;protein_id=WP_135420353.1;transl_table=11
##sequence-region NZ_PYKC01000115.1 1 20224
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000115.1	RefSeq	region	1	20224	.	+	.	ID=NZ_PYKC01000115.1:1..20224;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000115.1	RefSeq	gene	1	132	.	+	.	ID=gene-C9F00_RS24540;Name=C9F00_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24540;partial=true;start_range=.,1
NZ_PYKC01000115.1	Protein Homology	CDS	1	132	.	+	0	ID=cds-WP_245306395.1;Parent=gene-C9F00_RS24540;Dbxref=GenBank:WP_245306395.1;Name=WP_245306395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9F00_RS24540;partial=true;product=hypothetical protein;protein_id=WP_245306395.1;start_range=.,1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	127	1266	.	-	.	ID=gene-C9F00_RS18055;Name=C9F00_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18055;old_locus_tag=C9F00_18500
NZ_PYKC01000115.1	Protein Homology	CDS	127	1266	.	-	0	ID=cds-WP_052944199.1;Parent=gene-C9F00_RS18055;Dbxref=GenBank:WP_052944199.1;Name=WP_052944199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9F00_RS18055;product=3-phenylpropionate MFS transporter;protein_id=WP_052944199.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	1462	2715	.	-	.	ID=gene-C9F00_RS18060;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C9F00_RS18060;old_locus_tag=C9F00_18505
NZ_PYKC01000115.1	Protein Homology	CDS	1462	2715	.	-	0	ID=cds-WP_000919178.1;Parent=gene-C9F00_RS18060;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F00_RS18060;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	3040	4230	.	+	.	ID=gene-C9F00_RS18065;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9F00_RS18065;old_locus_tag=C9F00_18510
NZ_PYKC01000115.1	Protein Homology	CDS	3040	4230	.	+	0	ID=cds-WP_000883151.1;Parent=gene-C9F00_RS18065;Dbxref=GenBank:WP_000883151.1;Name=WP_000883151.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9F00_RS18065;product=NO-inducible flavohemoprotein;protein_id=WP_000883151.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	4412	5956	.	+	.	ID=gene-C9F00_RS18070;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9F00_RS18070;old_locus_tag=C9F00_18515
NZ_PYKC01000115.1	Protein Homology	CDS	4412	5956	.	+	0	ID=cds-WP_001187151.1;Parent=gene-C9F00_RS18070;Dbxref=GenBank:WP_001187151.1;Name=WP_001187151.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9F00_RS18070;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187151.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	6317	7648	.	+	.	ID=gene-C9F00_RS18075;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9F00_RS18075;old_locus_tag=C9F00_18520
NZ_PYKC01000115.1	Protein Homology	CDS	6317	7648	.	+	0	ID=cds-WP_000100008.1;Parent=gene-C9F00_RS18075;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9F00_RS18075;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	7731	9875	.	+	.	ID=gene-C9F00_RS18080;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9F00_RS18080;old_locus_tag=C9F00_18525
NZ_PYKC01000115.1	Protein Homology	CDS	7731	9875	.	+	0	ID=cds-WP_001100652.1;Parent=gene-C9F00_RS18080;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9F00_RS18080;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	9931	11391	.	+	.	ID=gene-C9F00_RS18085;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=C9F00_RS18085;old_locus_tag=C9F00_18530
NZ_PYKC01000115.1	Protein Homology	CDS	9931	11391	.	+	0	ID=cds-WP_000856793.1;Parent=gene-C9F00_RS18085;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9F00_RS18085;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	11440	11778	.	-	.	ID=gene-C9F00_RS18090;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9F00_RS18090;old_locus_tag=C9F00_18535
NZ_PYKC01000115.1	Protein Homology	CDS	11440	11778	.	-	0	ID=cds-WP_000717694.1;Parent=gene-C9F00_RS18090;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9F00_RS18090;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	11855	13189	.	-	.	ID=gene-C9F00_RS18095;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9F00_RS18095;old_locus_tag=C9F00_18540
NZ_PYKC01000115.1	Protein Homology	CDS	11855	13189	.	-	0	ID=cds-WP_348628823.1;Parent=gene-C9F00_RS18095;Dbxref=GenBank:WP_348628823.1;Name=WP_348628823.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=C9F00_RS18095;product=two-component system response regulator GlrR;protein_id=WP_348628823.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	13189	13953	.	-	.	ID=gene-C9F00_RS18100;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9F00_RS18100;old_locus_tag=C9F00_18545
NZ_PYKC01000115.1	Protein Homology	CDS	13189	13953	.	-	0	ID=cds-WP_135369556.1;Parent=gene-C9F00_RS18100;Dbxref=GenBank:WP_135369556.1;Name=WP_135369556.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9F00_RS18100;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_135369556.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	13955	15385	.	-	.	ID=gene-C9F00_RS18105;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9F00_RS18105;old_locus_tag=C9F00_18550
NZ_PYKC01000115.1	Protein Homology	CDS	13955	15385	.	-	0	ID=cds-WP_001670672.1;Parent=gene-C9F00_RS18105;Dbxref=GenBank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9F00_RS18105;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	16035	19922	.	-	.	ID=gene-C9F00_RS18110;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9F00_RS18110;old_locus_tag=C9F00_18555
NZ_PYKC01000115.1	Protein Homology	CDS	16035	19922	.	-	0	ID=cds-WP_135492423.1;Parent=gene-C9F00_RS18110;Dbxref=GenBank:WP_135492423.1;Name=WP_135492423.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9F00_RS18110;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_135492423.1;transl_table=11
NZ_PYKC01000115.1	RefSeq	gene	19947	20189	.	+	.	ID=gene-C9F00_RS18115;Name=C9F00_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18115;old_locus_tag=C9F00_18560
NZ_PYKC01000115.1	Protein Homology	CDS	19947	20189	.	+	0	ID=cds-WP_135492425.1;Parent=gene-C9F00_RS18115;Dbxref=GenBank:WP_135492425.1;Name=WP_135492425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9F00_RS18115;product=hypothetical protein;protein_id=WP_135492425.1;transl_table=11
##sequence-region NZ_PYKC01000098.1 1 19775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000098.1	RefSeq	region	1	19775	.	+	.	ID=NZ_PYKC01000098.1:1..19775;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000098.1	RefSeq	pseudogene	1	645	.	+	.	ID=gene-C9F00_RS15795;Name=C9F00_RS15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15795;old_locus_tag=C9F00_16180;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000098.1	Protein Homology	CDS	1	645	.	+	0	ID=cds-C9F00_RS15795;Parent=gene-C9F00_RS15795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F00_RS15795;partial=true;product=nitrite reductase (NAD(P)H);pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	642	968	.	+	.	ID=gene-C9F00_RS15800;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9F00_RS15800;old_locus_tag=C9F00_16185
NZ_PYKC01000098.1	Protein Homology	CDS	642	968	.	+	0	ID=cds-WP_135369146.1;Parent=gene-C9F00_RS15800;Dbxref=GenBank:WP_135369146.1;Name=WP_135369146.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9F00_RS15800;product=nitrite reductase small subunit NirD;protein_id=WP_135369146.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	1152	1961	.	+	.	ID=gene-C9F00_RS15805;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9F00_RS15805;old_locus_tag=C9F00_16190
NZ_PYKC01000098.1	Protein Homology	CDS	1152	1961	.	+	0	ID=cds-WP_000493576.1;Parent=gene-C9F00_RS15805;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=C9F00_RS15805;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	1973	3346	.	+	.	ID=gene-C9F00_RS15810;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9F00_RS15810;old_locus_tag=C9F00_16195
NZ_PYKC01000098.1	Protein Homology	CDS	1973	3346	.	+	0	ID=cds-WP_000349897.1;Parent=gene-C9F00_RS15810;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9F00_RS15810;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	3675	9272	.	+	.	ID=gene-C9F00_RS15815;Name=C9F00_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15815;old_locus_tag=C9F00_16200
NZ_PYKC01000098.1	Protein Homology	CDS	3675	9272	.	+	0	ID=cds-WP_135492383.1;Parent=gene-C9F00_RS15815;Dbxref=GenBank:WP_135492383.1;Name=WP_135492383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=C9F00_RS15815;product=autotransporter domain-containing protein;protein_id=WP_135492383.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	9465	9635	.	+	.	ID=gene-C9F00_RS15820;Name=C9F00_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15820;old_locus_tag=C9F00_16205
NZ_PYKC01000098.1	Protein Homology	CDS	9465	9635	.	+	0	ID=cds-WP_000472323.1;Parent=gene-C9F00_RS15820;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9F00_RS15820;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	9780	10784	.	-	.	ID=gene-C9F00_RS15825;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F00_RS15825;old_locus_tag=C9F00_16210
NZ_PYKC01000098.1	Protein Homology	CDS	9780	10784	.	-	0	ID=cds-WP_000165562.1;Parent=gene-C9F00_RS15825;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9F00_RS15825;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	10777	11535	.	-	.	ID=gene-C9F00_RS15830;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9F00_RS15830;old_locus_tag=C9F00_16215
NZ_PYKC01000098.1	Protein Homology	CDS	10777	11535	.	-	0	ID=cds-WP_135369357.1;Parent=gene-C9F00_RS15830;Dbxref=GenBank:WP_135369357.1;Name=WP_135369357.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9F00_RS15830;product=phosphoglycolate phosphatase;protein_id=WP_135369357.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	11528	12205	.	-	.	ID=gene-C9F00_RS15835;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9F00_RS15835;old_locus_tag=C9F00_16220
NZ_PYKC01000098.1	Protein Homology	CDS	11528	12205	.	-	0	ID=cds-WP_000816287.1;Parent=gene-C9F00_RS15835;Dbxref=GenBank:WP_000816287.1;Name=WP_000816287.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9F00_RS15835;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816287.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	12223	13059	.	-	.	ID=gene-C9F00_RS15840;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9F00_RS15840;old_locus_tag=C9F00_16225
NZ_PYKC01000098.1	Protein Homology	CDS	12223	13059	.	-	0	ID=cds-WP_000742132.1;Parent=gene-C9F00_RS15840;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9F00_RS15840;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	13240	14517	.	-	.	ID=gene-C9F00_RS15845;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9F00_RS15845;old_locus_tag=C9F00_16230
NZ_PYKC01000098.1	Protein Homology	CDS	13240	14517	.	-	0	ID=cds-WP_135369358.1;Parent=gene-C9F00_RS15845;Dbxref=GenBank:WP_135369358.1;Name=WP_135369358.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9F00_RS15845;product=cell division protein DamX;protein_id=WP_135369358.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	14615	15703	.	-	.	ID=gene-C9F00_RS15850;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9F00_RS15850;old_locus_tag=C9F00_16235
NZ_PYKC01000098.1	Protein Homology	CDS	14615	15703	.	-	0	ID=cds-WP_135369359.1;Parent=gene-C9F00_RS15850;Dbxref=GenBank:WP_135369359.1;Name=WP_135369359.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9F00_RS15850;product=3-dehydroquinate synthase;protein_id=WP_135369359.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	15760	16281	.	-	.	ID=gene-C9F00_RS15855;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9F00_RS15855;old_locus_tag=C9F00_16240
NZ_PYKC01000098.1	Protein Homology	CDS	15760	16281	.	-	0	ID=cds-WP_000818621.1;Parent=gene-C9F00_RS15855;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9F00_RS15855;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	16746	17984	.	-	.	ID=gene-C9F00_RS15865;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9F00_RS15865;old_locus_tag=C9F00_16250
NZ_PYKC01000098.1	Protein Homology	CDS	16746	17984	.	-	0	ID=cds-WP_135369360.1;Parent=gene-C9F00_RS15865;Dbxref=GenBank:WP_135369360.1;Name=WP_135369360.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9F00_RS15865;product=DNA uptake porin HofQ;protein_id=WP_135369360.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	17899	18300	.	-	.	ID=gene-C9F00_RS15870;Name=C9F00_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15870;old_locus_tag=C9F00_16255
NZ_PYKC01000098.1	Protein Homology	CDS	17899	18300	.	-	0	ID=cds-WP_000648140.1;Parent=gene-C9F00_RS15870;Dbxref=GenBank:WP_000648140.1;Name=WP_000648140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9F00_RS15870;product=HofP DNA utilization family protein;protein_id=WP_000648140.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	pseudogene	18290	18832	.	-	.	ID=gene-C9F00_RS15875;Name=C9F00_RS15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS15875;old_locus_tag=C9F00_16260;pseudo=true
NZ_PYKC01000098.1	Protein Homology	CDS	18290	18832	.	-	0	ID=cds-C9F00_RS15875;Parent=gene-C9F00_RS15875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670488.1;locus_tag=C9F00_RS15875;product=terminase small subunit;pseudo=true;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	18845	19144	.	-	.	ID=gene-C9F00_RS15880;Name=C9F00_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15880;old_locus_tag=C9F00_16265
NZ_PYKC01000098.1	GeneMarkS-2+	CDS	18845	19144	.	-	0	ID=cds-WP_135492384.1;Parent=gene-C9F00_RS15880;Dbxref=GenBank:WP_135492384.1;Name=WP_135492384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS15880;product=hypothetical protein;protein_id=WP_135492384.1;transl_table=11
NZ_PYKC01000098.1	RefSeq	gene	19141	19470	.	-	.	ID=gene-C9F00_RS15885;Name=C9F00_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS15885;old_locus_tag=C9F00_16270
NZ_PYKC01000098.1	GeneMarkS-2+	CDS	19141	19470	.	-	0	ID=cds-WP_135492386.1;Parent=gene-C9F00_RS15885;Dbxref=GenBank:WP_135492386.1;Name=WP_135492386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS15885;product=peptidase M48%2C Ste24p;protein_id=WP_135492386.1;transl_table=11
##sequence-region NZ_PYKC01000044.1 1 87536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000044.1	RefSeq	region	1	87536	.	+	.	ID=NZ_PYKC01000044.1:1..87536;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000044.1	RefSeq	pseudogene	155	1015	.	+	.	ID=gene-C9F00_RS06835;Name=C9F00_RS06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06835;old_locus_tag=C9F00_06965;partial=true;pseudo=true;start_range=.,155
NZ_PYKC01000044.1	Protein Homology	CDS	155	1015	.	+	0	ID=cds-C9F00_RS06835;Parent=gene-C9F00_RS06835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9F00_RS06835;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;pseudo=true;start_range=.,155;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	1093	2022	.	+	.	ID=gene-C9F00_RS06840;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9F00_RS06840;old_locus_tag=C9F00_06970
NZ_PYKC01000044.1	Protein Homology	CDS	1093	2022	.	+	0	ID=cds-WP_135492219.1;Parent=gene-C9F00_RS06840;Dbxref=GenBank:WP_135492219.1;Name=WP_135492219.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9F00_RS06840;product=L%2CD-transpeptidase;protein_id=WP_135492219.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	2249	2324	.	-	.	ID=gene-C9F00_RS06845;Name=C9F00_RS06845;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06845;old_locus_tag=C9F00_06975
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	2249	2324	.	-	.	ID=rna-C9F00_RS06845;Parent=gene-C9F00_RS06845;anticodon=(pos:complement(2289..2291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06845;product=tRNA-Asn
NZ_PYKC01000044.1	tRNAscan-SE	exon	2249	2324	.	-	.	ID=exon-C9F00_RS06845-1;Parent=rna-C9F00_RS06845;anticodon=(pos:complement(2289..2291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06845;product=tRNA-Asn
NZ_PYKC01000044.1	RefSeq	gene	2484	3941	.	+	.	ID=gene-C9F00_RS06850;Name=C9F00_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06850;old_locus_tag=C9F00_06980
NZ_PYKC01000044.1	Protein Homology	CDS	2484	3941	.	+	0	ID=cds-WP_001669456.1;Parent=gene-C9F00_RS06850;Dbxref=GenBank:WP_001669456.1;Name=WP_001669456.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9F00_RS06850;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001669456.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	4082	4157	.	+	.	ID=gene-C9F00_RS06855;Name=C9F00_RS06855;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06855;old_locus_tag=C9F00_06985
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	4082	4157	.	+	.	ID=rna-C9F00_RS06855;Parent=gene-C9F00_RS06855;anticodon=(pos:4115..4117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06855;product=tRNA-Asn
NZ_PYKC01000044.1	tRNAscan-SE	exon	4082	4157	.	+	.	ID=exon-C9F00_RS06855-1;Parent=rna-C9F00_RS06855;anticodon=(pos:4115..4117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06855;product=tRNA-Asn
NZ_PYKC01000044.1	RefSeq	gene	4577	5041	.	+	.	ID=gene-C9F00_RS06860;Name=C9F00_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06860;old_locus_tag=C9F00_06995
NZ_PYKC01000044.1	Protein Homology	CDS	4577	5041	.	+	0	ID=cds-WP_000381834.1;Parent=gene-C9F00_RS06860;Dbxref=GenBank:WP_000381834.1;Name=WP_000381834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=C9F00_RS06860;product=STM2901 family protein;protein_id=WP_000381834.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	5035	5361	.	+	.	ID=gene-C9F00_RS06865;Name=C9F00_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06865;old_locus_tag=C9F00_07000
NZ_PYKC01000044.1	Protein Homology	CDS	5035	5361	.	+	0	ID=cds-WP_000228159.1;Parent=gene-C9F00_RS06865;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=C9F00_RS06865;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	5350	5511	.	-	.	ID=gene-C9F00_RS06870;Name=C9F00_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06870;old_locus_tag=C9F00_07005
NZ_PYKC01000044.1	Protein Homology	CDS	5350	5511	.	-	0	ID=cds-WP_023888257.1;Parent=gene-C9F00_RS06870;Dbxref=GenBank:WP_023888257.1;Name=WP_023888257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9F00_RS06870;product=hypothetical protein;protein_id=WP_023888257.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	5557	7011	.	+	.	ID=gene-C9F00_RS06875;Name=C9F00_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06875;old_locus_tag=C9F00_07010
NZ_PYKC01000044.1	Protein Homology	CDS	5557	7011	.	+	0	ID=cds-WP_135369611.1;Parent=gene-C9F00_RS06875;Dbxref=GenBank:WP_135369611.1;Name=WP_135369611.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9F00_RS06875;product=AMP nucleosidase;protein_id=WP_135369611.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	7537	7710	.	-	.	ID=gene-C9F00_RS24075;Name=C9F00_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24075
NZ_PYKC01000044.1	Protein Homology	CDS	7537	7710	.	-	0	ID=cds-WP_000957535.1;Parent=gene-C9F00_RS24075;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=C9F00_RS24075;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	7758	7862	.	+	.	ID=gene-C9F00_RS06885;Name=C9F00_RS06885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06885;old_locus_tag=C9F00_07020;partial=true;pseudo=true;start_range=.,7758
NZ_PYKC01000044.1	Protein Homology	CDS	7758	7862	.	+	0	ID=cds-C9F00_RS06885;Parent=gene-C9F00_RS06885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F00_RS06885;partial=true;product=DUF520 family protein;pseudo=true;start_range=.,7758;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	7920	9650	.	-	.	ID=gene-C9F00_RS06890;Name=C9F00_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06890;old_locus_tag=C9F00_07025
NZ_PYKC01000044.1	Protein Homology	CDS	7920	9650	.	-	0	ID=cds-WP_135369609.1;Parent=gene-C9F00_RS06890;Dbxref=GenBank:WP_135369609.1;Name=WP_135369609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F00_RS06890;product=hypothetical protein;protein_id=WP_135369609.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	9707	11401	.	-	.	ID=gene-C9F00_RS06895;Name=C9F00_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06895;old_locus_tag=C9F00_07030
NZ_PYKC01000044.1	Protein Homology	CDS	9707	11401	.	-	0	ID=cds-WP_135369616.1;Parent=gene-C9F00_RS06895;Dbxref=GenBank:WP_135369616.1;Name=WP_135369616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9F00_RS06895;product=SEL1-like repeat protein;protein_id=WP_135369616.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	12085	12363	.	-	.	ID=gene-C9F00_RS06900;Name=C9F00_RS06900;end_range=12363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06900;old_locus_tag=C9F00_07035;partial=true;pseudo=true
NZ_PYKC01000044.1	Protein Homology	CDS	12085	12363	.	-	0	ID=cds-C9F00_RS06900;Parent=gene-C9F00_RS06900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9F00_RS06900;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	12449	12916	.	-	.	ID=gene-C9F00_RS06905;Name=C9F00_RS06905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06905;old_locus_tag=C9F00_07040;partial=true;pseudo=true;start_range=.,12449
NZ_PYKC01000044.1	Protein Homology	CDS	12449	12916	.	-	0	ID=cds-C9F00_RS06905;Parent=gene-C9F00_RS06905;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9F00_RS06905;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;start_range=.,12449;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	13393	13866	.	-	.	ID=gene-C9F00_RS06910;Name=C9F00_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06910;old_locus_tag=C9F00_07045
NZ_PYKC01000044.1	Protein Homology	CDS	13393	13866	.	-	0	ID=cds-WP_023993346.1;Parent=gene-C9F00_RS06910;Dbxref=GenBank:WP_023993346.1;Name=WP_023993346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9F00_RS06910;product=protease;protein_id=WP_023993346.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	14030	14105	.	-	.	ID=gene-C9F00_RS06915;Name=C9F00_RS06915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06915;old_locus_tag=C9F00_07050
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	14030	14105	.	-	.	ID=rna-C9F00_RS06915;Parent=gene-C9F00_RS06915;anticodon=(pos:complement(14070..14072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06915;product=tRNA-Asn
NZ_PYKC01000044.1	tRNAscan-SE	exon	14030	14105	.	-	.	ID=exon-C9F00_RS06915-1;Parent=rna-C9F00_RS06915;anticodon=(pos:complement(14070..14072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06915;product=tRNA-Asn
NZ_PYKC01000044.1	RefSeq	pseudogene	14527	14832	.	-	.	ID=gene-C9F00_RS06920;Name=C9F00_RS06920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06920;old_locus_tag=C9F00_07055;partial=true;pseudo=true;start_range=.,14527
NZ_PYKC01000044.1	Protein Homology	CDS	14527	14832	.	-	0	ID=cds-C9F00_RS06920;Parent=gene-C9F00_RS06920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9F00_RS06920;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,14527;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	15000	15075	.	-	.	ID=gene-C9F00_RS06925;Name=C9F00_RS06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06925;old_locus_tag=C9F00_07060
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	15000	15075	.	-	.	ID=rna-C9F00_RS06925;Parent=gene-C9F00_RS06925;anticodon=(pos:complement(15040..15042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06925;product=tRNA-Asn
NZ_PYKC01000044.1	tRNAscan-SE	exon	15000	15075	.	-	.	ID=exon-C9F00_RS06925-1;Parent=rna-C9F00_RS06925;anticodon=(pos:complement(15040..15042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06925;product=tRNA-Asn
NZ_PYKC01000044.1	RefSeq	gene	15176	15973	.	-	.	ID=gene-C9F00_RS06930;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9F00_RS06930;old_locus_tag=C9F00_07065
NZ_PYKC01000044.1	Protein Homology	CDS	15176	15973	.	-	0	ID=cds-WP_135369608.1;Parent=gene-C9F00_RS06930;Dbxref=GenBank:WP_135369608.1;Name=WP_135369608.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9F00_RS06930;product=DgsA anti-repressor MtfA;protein_id=WP_135369608.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	16062	16151	.	+	.	ID=gene-C9F00_RS06935;Name=C9F00_RS06935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06935;old_locus_tag=C9F00_07070
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	16062	16151	.	+	.	ID=rna-C9F00_RS06935;Parent=gene-C9F00_RS06935;anticodon=(pos:16096..16098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06935;product=tRNA-Ser
NZ_PYKC01000044.1	tRNAscan-SE	exon	16062	16151	.	+	.	ID=exon-C9F00_RS06935-1;Parent=rna-C9F00_RS06935;anticodon=(pos:16096..16098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06935;product=tRNA-Ser
NZ_PYKC01000044.1	RefSeq	pseudogene	16442	16687	.	+	.	ID=gene-C9F00_RS24715;Name=C9F00_RS24715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24715;partial=true;pseudo=true;start_range=.,16442
NZ_PYKC01000044.1	Protein Homology	CDS	16442	16687	.	+	0	ID=cds-C9F00_RS24715;Parent=gene-C9F00_RS24715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524936.1;locus_tag=C9F00_RS24715;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16442;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	17169	17987	.	+	.	ID=gene-C9F00_RS06950;Name=C9F00_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06950;old_locus_tag=C9F00_07085
NZ_PYKC01000044.1	Protein Homology	CDS	17169	17987	.	+	0	ID=cds-WP_135369607.1;Parent=gene-C9F00_RS06950;Dbxref=GenBank:WP_135369607.1;Name=WP_135369607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=C9F00_RS06950;product=hypothetical protein;protein_id=WP_135369607.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	18247	18378	.	-	.	ID=gene-C9F00_RS06955;Name=C9F00_RS06955;end_range=18378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06955;old_locus_tag=C9F00_07090;partial=true;pseudo=true;start_range=.,18247
NZ_PYKC01000044.1	Protein Homology	CDS	18247	18378	.	-	0	ID=cds-C9F00_RS06955;Parent=gene-C9F00_RS06955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18378,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=C9F00_RS06955;partial=true;product=transposase;pseudo=true;start_range=.,18247;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	18448	19464	.	+	.	ID=gene-C9F00_RS06960;Name=C9F00_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06960;old_locus_tag=C9F00_07095
NZ_PYKC01000044.1	Protein Homology	CDS	18448	19464	.	+	0	ID=cds-WP_135369060.1;Parent=gene-C9F00_RS06960;Dbxref=GenBank:WP_135369060.1;Name=WP_135369060.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=C9F00_RS06960;product=IS110 family transposase;protein_id=WP_135369060.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	19690	19806	.	-	.	ID=gene-C9F00_RS06965;Name=C9F00_RS06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS06965;old_locus_tag=C9F00_07100;partial=true;pseudo=true;start_range=.,19690
NZ_PYKC01000044.1	Protein Homology	CDS	19690	19806	.	-	0	ID=cds-C9F00_RS06965;Parent=gene-C9F00_RS06965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=C9F00_RS06965;partial=true;product=transposase;pseudo=true;start_range=.,19690;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	19889	19987	.	-	.	ID=gene-C9F00_RS24380;Name=C9F00_RS24380;end_range=19987,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24380;old_locus_tag=C9F00_07105;partial=true;pseudo=true;start_range=.,19889
NZ_PYKC01000044.1	Protein Homology	CDS	19889	19987	.	-	0	ID=cds-C9F00_RS24380;Parent=gene-C9F00_RS24380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=C9F00_RS24380;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,19889;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	20236	20323	.	-	.	ID=gene-C9F00_RS06975;Name=C9F00_RS06975;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS06975;old_locus_tag=C9F00_07110
NZ_PYKC01000044.1	tRNAscan-SE	tRNA	20236	20323	.	-	.	ID=rna-C9F00_RS06975;Parent=gene-C9F00_RS06975;anticodon=(pos:complement(20287..20289));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06975;product=tRNA-Ser
NZ_PYKC01000044.1	tRNAscan-SE	exon	20236	20323	.	-	.	ID=exon-C9F00_RS06975-1;Parent=rna-C9F00_RS06975;anticodon=(pos:complement(20287..20289));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS06975;product=tRNA-Ser
NZ_PYKC01000044.1	RefSeq	gene	20559	21497	.	+	.	ID=gene-C9F00_RS06985;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9F00_RS06985;old_locus_tag=C9F00_07120
NZ_PYKC01000044.1	Protein Homology	CDS	20559	21497	.	+	0	ID=cds-WP_000402551.1;Parent=gene-C9F00_RS06985;Dbxref=GenBank:WP_000402551.1;Name=WP_000402551.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9F00_RS06985;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402551.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	21582	22319	.	+	.	ID=gene-C9F00_RS06990;Name=C9F00_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06990;old_locus_tag=C9F00_07125
NZ_PYKC01000044.1	Protein Homology	CDS	21582	22319	.	+	0	ID=cds-WP_000283643.1;Parent=gene-C9F00_RS06990;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9F00_RS06990;product=phosphatase;protein_id=WP_000283643.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	22343	22897	.	+	.	ID=gene-C9F00_RS06995;Name=C9F00_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06995;old_locus_tag=C9F00_07130
NZ_PYKC01000044.1	Protein Homology	CDS	22343	22897	.	+	0	ID=cds-WP_001001883.1;Parent=gene-C9F00_RS06995;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9F00_RS06995;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	22998	23480	.	+	.	ID=gene-C9F00_RS07000;Name=C9F00_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07000;old_locus_tag=C9F00_07135
NZ_PYKC01000044.1	Protein Homology	CDS	22998	23480	.	+	0	ID=cds-WP_001546652.1;Parent=gene-C9F00_RS07000;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9F00_RS07000;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	23588	24046	.	-	.	ID=gene-C9F00_RS07010;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9F00_RS07010;old_locus_tag=C9F00_07145
NZ_PYKC01000044.1	Protein Homology	CDS	23588	24046	.	-	0	ID=cds-WP_000502119.1;Parent=gene-C9F00_RS07010;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=C9F00_RS07010;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	24230	25063	.	-	.	ID=gene-C9F00_RS07020;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9F00_RS07020;old_locus_tag=C9F00_07155
NZ_PYKC01000044.1	Protein Homology	CDS	24230	25063	.	-	0	ID=cds-WP_001137620.1;Parent=gene-C9F00_RS07020;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9F00_RS07020;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	25090	25506	.	-	.	ID=gene-C9F00_RS07025;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9F00_RS07025;old_locus_tag=C9F00_07160
NZ_PYKC01000044.1	Protein Homology	CDS	25090	25506	.	-	0	ID=cds-WP_001264073.1;Parent=gene-C9F00_RS07025;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9F00_RS07025;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	25533	25928	.	-	.	ID=gene-C9F00_RS07030;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9F00_RS07030;old_locus_tag=C9F00_07165
NZ_PYKC01000044.1	Protein Homology	CDS	25533	25928	.	-	0	ID=cds-WP_000833307.1;Parent=gene-C9F00_RS07030;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9F00_RS07030;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	25933	26583	.	-	.	ID=gene-C9F00_RS07035;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9F00_RS07035;old_locus_tag=C9F00_07170
NZ_PYKC01000044.1	Protein Homology	CDS	25933	26583	.	-	0	ID=cds-WP_000481517.1;Parent=gene-C9F00_RS07035;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9F00_RS07035;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	27338	27793	.	+	.	ID=gene-C9F00_RS07040;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9F00_RS07040;old_locus_tag=C9F00_07180
NZ_PYKC01000044.1	Protein Homology	CDS	27338	27793	.	+	0	ID=cds-WP_000791655.1;Parent=gene-C9F00_RS07040;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9F00_RS07040;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	27835	28290	.	+	.	ID=gene-C9F00_RS07045;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9F00_RS07045;old_locus_tag=C9F00_07185
NZ_PYKC01000044.1	Protein Homology	CDS	27835	28290	.	+	0	ID=cds-WP_000771416.1;Parent=gene-C9F00_RS07045;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9F00_RS07045;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	28352	28678	.	+	.	ID=gene-C9F00_RS07050;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9F00_RS07050;old_locus_tag=C9F00_07190
NZ_PYKC01000044.1	Protein Homology	CDS	28352	28678	.	+	0	ID=cds-WP_000557256.1;Parent=gene-C9F00_RS07050;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9F00_RS07050;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	28809	29129	.	+	.	ID=gene-C9F00_RS07055;Name=C9F00_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07055;old_locus_tag=C9F00_07195
NZ_PYKC01000044.1	Protein Homology	CDS	28809	29129	.	+	0	ID=cds-WP_000111254.1;Parent=gene-C9F00_RS07055;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9F00_RS07055;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	29218	29757	.	+	.	ID=gene-C9F00_RS07060;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9F00_RS07060;old_locus_tag=C9F00_07200
NZ_PYKC01000044.1	Protein Homology	CDS	29218	29757	.	+	0	ID=cds-WP_135492221.1;Parent=gene-C9F00_RS07060;Dbxref=GenBank:WP_135492221.1;Name=WP_135492221.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9F00_RS07060;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_135492221.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	29693	31180	.	+	.	ID=gene-C9F00_RS07065;Name=C9F00_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07065;old_locus_tag=C9F00_07205
NZ_PYKC01000044.1	Protein Homology	CDS	29693	31180	.	+	0	ID=cds-WP_001736196.1;Parent=gene-C9F00_RS07065;Dbxref=GenBank:WP_001736196.1;Name=WP_001736196.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9F00_RS07065;product=phospholipase D family protein;protein_id=WP_001736196.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	31197	32351	.	-	.	ID=gene-C9F00_RS07070;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=C9F00_RS07070;old_locus_tag=C9F00_07210
NZ_PYKC01000044.1	Protein Homology	CDS	31197	32351	.	-	0	ID=cds-WP_135369044.1;Parent=gene-C9F00_RS07070;Dbxref=GenBank:WP_135369044.1;Name=WP_135369044.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9F00_RS07070;product=glucans biosynthesis protein MdoC;protein_id=WP_135369044.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	32623	34158	.	+	.	ID=gene-C9F00_RS07080;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9F00_RS07080;old_locus_tag=C9F00_07215
NZ_PYKC01000044.1	Protein Homology	CDS	32623	34158	.	+	0	ID=cds-WP_001562609.1;Parent=gene-C9F00_RS07080;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9F00_RS07080;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	34151	36694	.	+	.	ID=gene-C9F00_RS07085;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=C9F00_RS07085;old_locus_tag=C9F00_07220
NZ_PYKC01000044.1	Protein Homology	CDS	34151	36694	.	+	0	ID=cds-WP_001044614.1;Parent=gene-C9F00_RS07085;Dbxref=GenBank:WP_001044614.1;Name=WP_001044614.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F00_RS07085;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044614.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	36768	36995	.	+	.	ID=gene-C9F00_RS07090;Name=C9F00_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07090;old_locus_tag=C9F00_07225
NZ_PYKC01000044.1	Protein Homology	CDS	36768	36995	.	+	0	ID=cds-WP_001217832.1;Parent=gene-C9F00_RS07090;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9F00_RS07090;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	36996	37370	.	-	.	ID=gene-C9F00_RS07095;Name=C9F00_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07095;old_locus_tag=C9F00_07230
NZ_PYKC01000044.1	Protein Homology	CDS	36996	37370	.	-	0	ID=cds-WP_135369043.1;Parent=gene-C9F00_RS07095;Dbxref=GenBank:WP_135369043.1;Name=WP_135369043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9F00_RS07095;product=MysB family protein;protein_id=WP_135369043.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	37452	38666	.	-	.	ID=gene-C9F00_RS07100;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9F00_RS07100;old_locus_tag=C9F00_07235
NZ_PYKC01000044.1	Protein Homology	CDS	37452	38666	.	-	0	ID=cds-WP_000075053.1;Parent=gene-C9F00_RS07100;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9F00_RS07100;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	38821	39741	.	-	.	ID=gene-C9F00_RS07105;Name=C9F00_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07105;old_locus_tag=C9F00_07245
NZ_PYKC01000044.1	Protein Homology	CDS	38821	39741	.	-	0	ID=cds-WP_000163977.1;Parent=gene-C9F00_RS07105;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9F00_RS07105;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	39961	41013	.	+	.	ID=gene-C9F00_RS07110;Name=C9F00_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07110;old_locus_tag=C9F00_07250
NZ_PYKC01000044.1	Protein Homology	CDS	39961	41013	.	+	0	ID=cds-WP_135369042.1;Parent=gene-C9F00_RS07110;Dbxref=GenBank:WP_135369042.1;Name=WP_135369042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9F00_RS07110;product=rhodanese-related sulfurtransferase;protein_id=WP_135369042.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	41065	41640	.	-	.	ID=gene-C9F00_RS07115;Name=C9F00_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07115;old_locus_tag=C9F00_07255
NZ_PYKC01000044.1	Protein Homology	CDS	41065	41640	.	-	0	ID=cds-WP_076735729.1;Parent=gene-C9F00_RS07115;Dbxref=GenBank:WP_076735729.1;Name=WP_076735729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9F00_RS07115;product=YceI family protein;protein_id=WP_076735729.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	41637	42209	.	-	.	ID=gene-C9F00_RS07120;Name=C9F00_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07120;old_locus_tag=C9F00_07260
NZ_PYKC01000044.1	Protein Homology	CDS	41637	42209	.	-	0	ID=cds-WP_076735728.1;Parent=gene-C9F00_RS07120;Dbxref=GenBank:WP_076735728.1;Name=WP_076735728.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9F00_RS07120;product=cytochrome b;protein_id=WP_076735728.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	42472	42585	.	-	.	ID=gene-C9F00_RS07125;Name=C9F00_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07125;old_locus_tag=C9F00_07270
NZ_PYKC01000044.1	Protein Homology	CDS	42472	42585	.	-	0	ID=cds-WP_001253282.1;Parent=gene-C9F00_RS07125;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9F00_RS07125;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	42626	43744	.	-	.	ID=gene-C9F00_RS07130;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9F00_RS07130;old_locus_tag=C9F00_07275
NZ_PYKC01000044.1	Protein Homology	CDS	42626	43744	.	-	0	ID=cds-WP_001524750.1;Parent=gene-C9F00_RS07130;Dbxref=GenBank:WP_001524750.1;Name=WP_001524750.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9F00_RS07130;product=N-methyl-L-tryptophan oxidase;protein_id=WP_001524750.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	43857	44111	.	-	.	ID=gene-C9F00_RS07135;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9F00_RS07135;old_locus_tag=C9F00_07280
NZ_PYKC01000044.1	Protein Homology	CDS	43857	44111	.	-	0	ID=cds-WP_000414441.1;Parent=gene-C9F00_RS07135;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9F00_RS07135;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	44401	44646	.	-	.	ID=gene-C9F00_RS07140;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9F00_RS07140;old_locus_tag=C9F00_07285
NZ_PYKC01000044.1	Protein Homology	CDS	44401	44646	.	-	0	ID=cds-WP_001217763.1;Parent=gene-C9F00_RS07140;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9F00_RS07140;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	44720	45766	.	-	.	ID=gene-C9F00_RS07145;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9F00_RS07145;old_locus_tag=C9F00_07290
NZ_PYKC01000044.1	Protein Homology	CDS	44720	45766	.	-	0	ID=cds-WP_000126604.1;Parent=gene-C9F00_RS07145;Dbxref=GenBank:WP_000126604.1;Name=WP_000126604.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9F00_RS07145;product=dihydroorotase;protein_id=WP_000126604.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	45870	46430	.	-	.	ID=gene-C9F00_RS07150;Name=C9F00_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07150;old_locus_tag=C9F00_07295
NZ_PYKC01000044.1	Protein Homology	CDS	45870	46430	.	-	0	ID=cds-WP_000713054.1;Parent=gene-C9F00_RS07150;Dbxref=GenBank:WP_000713054.1;Name=WP_000713054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9F00_RS07150;product=lipoprotein;protein_id=WP_000713054.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	46555	47202	.	-	.	ID=gene-C9F00_RS07155;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9F00_RS07155;old_locus_tag=C9F00_07300
NZ_PYKC01000044.1	Protein Homology	CDS	46555	47202	.	-	0	ID=cds-WP_000780893.1;Parent=gene-C9F00_RS07155;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9F00_RS07155;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	47266	48474	.	-	.	ID=gene-C9F00_RS07160;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9F00_RS07160;old_locus_tag=C9F00_07305
NZ_PYKC01000044.1	Protein Homology	CDS	47266	48474	.	-	0	ID=cds-WP_000092178.1;Parent=gene-C9F00_RS07160;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F00_RS07160;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	48711	49295	.	+	.	ID=gene-C9F00_RS07165;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9F00_RS07165;old_locus_tag=C9F00_07310
NZ_PYKC01000044.1	Protein Homology	CDS	48711	49295	.	+	0	ID=cds-WP_000468204.1;Parent=gene-C9F00_RS07165;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9F00_RS07165;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	49331	49978	.	+	.	ID=gene-C9F00_RS07170;Name=C9F00_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07170;old_locus_tag=C9F00_07315
NZ_PYKC01000044.1	Protein Homology	CDS	49331	49978	.	+	0	ID=cds-WP_135492223.1;Parent=gene-C9F00_RS07170;Dbxref=GenBank:WP_135492223.1;Name=WP_135492223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9F00_RS07170;product=YceH family protein;protein_id=WP_135492223.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	49980	50903	.	+	.	ID=gene-C9F00_RS07175;Name=C9F00_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07175;old_locus_tag=C9F00_07320
NZ_PYKC01000044.1	Protein Homology	CDS	49980	50903	.	+	0	ID=cds-WP_135369041.1;Parent=gene-C9F00_RS07175;Dbxref=GenBank:WP_135369041.1;Name=WP_135369041.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9F00_RS07175;product=Gfo/Idh/MocA family protein;protein_id=WP_135369041.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	51207	52742	.	+	.	ID=gene-C9F00_RS07180;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=C9F00_RS07180;old_locus_tag=C9F00_07325
NZ_PYKC01000044.1	Protein Homology	CDS	51207	52742	.	+	0	ID=cds-WP_001537775.1;Parent=gene-C9F00_RS07180;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9F00_RS07180;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	52824	53246	.	-	.	ID=gene-C9F00_RS07185;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=C9F00_RS07185;old_locus_tag=C9F00_07330
NZ_PYKC01000044.1	Protein Homology	CDS	52824	53246	.	-	0	ID=cds-WP_000197547.1;Parent=gene-C9F00_RS07185;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9F00_RS07185;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	53251	53544	.	-	.	ID=gene-C9F00_RS07190;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9F00_RS07190;old_locus_tag=C9F00_07335
NZ_PYKC01000044.1	Protein Homology	CDS	53251	53544	.	-	0	ID=cds-WP_000020893.1;Parent=gene-C9F00_RS07190;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9F00_RS07190;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	53636	54295	.	-	.	ID=gene-C9F00_RS07195;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9F00_RS07195;old_locus_tag=C9F00_07340
NZ_PYKC01000044.1	Protein Homology	CDS	53636	54295	.	-	0	ID=cds-WP_001194086.1;Parent=gene-C9F00_RS07195;Dbxref=GenBank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9F00_RS07195;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	54452	54868	.	+	.	ID=gene-C9F00_RS07200;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9F00_RS07200;old_locus_tag=C9F00_07350
NZ_PYKC01000044.1	Protein Homology	CDS	54452	54868	.	+	0	ID=cds-WP_000887043.1;Parent=gene-C9F00_RS07200;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9F00_RS07200;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	54872	55276	.	+	.	ID=gene-C9F00_RS07205;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9F00_RS07205;old_locus_tag=C9F00_07355
NZ_PYKC01000044.1	Protein Homology	CDS	54872	55276	.	+	0	ID=cds-WP_001196448.1;Parent=gene-C9F00_RS07205;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9F00_RS07205;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	55288	55986	.	+	.	ID=gene-C9F00_RS07210;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9F00_RS07210;old_locus_tag=C9F00_07360
NZ_PYKC01000044.1	Protein Homology	CDS	55288	55986	.	+	0	ID=cds-WP_000020450.1;Parent=gene-C9F00_RS07210;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9F00_RS07210;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	56013	57224	.	+	.	ID=gene-C9F00_RS07215;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9F00_RS07215;old_locus_tag=C9F00_07365
NZ_PYKC01000044.1	Protein Homology	CDS	56013	57224	.	+	0	ID=cds-WP_000010567.1;Parent=gene-C9F00_RS07215;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9F00_RS07215;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	57245	58000	.	+	.	ID=gene-C9F00_RS07220;Name=C9F00_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07220;old_locus_tag=C9F00_07370
NZ_PYKC01000044.1	Protein Homology	CDS	57245	58000	.	+	0	ID=cds-WP_000349278.1;Parent=gene-C9F00_RS07220;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9F00_RS07220;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	58014	58796	.	+	.	ID=gene-C9F00_RS07225;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9F00_RS07225;old_locus_tag=C9F00_07375
NZ_PYKC01000044.1	Protein Homology	CDS	58014	58796	.	+	0	ID=cds-WP_000625851.1;Parent=gene-C9F00_RS07225;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9F00_RS07225;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	58851	59549	.	+	.	ID=gene-C9F00_RS07230;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=C9F00_RS07230;old_locus_tag=C9F00_07380
NZ_PYKC01000044.1	Protein Homology	CDS	58851	59549	.	+	0	ID=cds-WP_001174897.1;Parent=gene-C9F00_RS07230;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9F00_RS07230;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	59561	60658	.	+	.	ID=gene-C9F00_RS07235;Name=C9F00_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07235;old_locus_tag=C9F00_07385
NZ_PYKC01000044.1	Protein Homology	CDS	59561	60658	.	+	0	ID=cds-WP_001518955.1;Parent=gene-C9F00_RS07235;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9F00_RS07235;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	60658	61608	.	+	.	ID=gene-C9F00_RS07240;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9F00_RS07240;old_locus_tag=C9F00_07390
NZ_PYKC01000044.1	Protein Homology	CDS	60658	61608	.	+	0	ID=cds-WP_000578685.1;Parent=gene-C9F00_RS07240;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9F00_RS07240;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	61673	63334	.	+	.	ID=gene-C9F00_RS07245;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9F00_RS07245;old_locus_tag=C9F00_07395
NZ_PYKC01000044.1	Protein Homology	CDS	61673	63334	.	+	0	ID=cds-WP_000096425.1;Parent=gene-C9F00_RS07245;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9F00_RS07245;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	63349	64302	.	+	.	ID=gene-C9F00_RS07250;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9F00_RS07250;old_locus_tag=C9F00_07400
NZ_PYKC01000044.1	Protein Homology	CDS	63349	64302	.	+	0	ID=cds-WP_001223032.1;Parent=gene-C9F00_RS07250;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9F00_RS07250;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	64559	67762	.	-	.	ID=gene-C9F00_RS07255;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9F00_RS07255;old_locus_tag=C9F00_07410
NZ_PYKC01000044.1	Protein Homology	CDS	64559	67762	.	-	0	ID=cds-WP_135369040.1;Parent=gene-C9F00_RS07255;Dbxref=GenBank:WP_135369040.1;Name=WP_135369040.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9F00_RS07255;product=ribonuclease E;protein_id=WP_135369040.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	68336	69295	.	+	.	ID=gene-C9F00_RS07265;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9F00_RS07265;old_locus_tag=C9F00_07420
NZ_PYKC01000044.1	Protein Homology	CDS	68336	69295	.	+	0	ID=cds-WP_000846316.1;Parent=gene-C9F00_RS07265;Dbxref=GenBank:WP_000846316.1;Name=WP_000846316.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9F00_RS07265;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846316.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	69451	70194	.	+	.	ID=gene-C9F00_RS07270;Name=C9F00_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07270;old_locus_tag=C9F00_07425
NZ_PYKC01000044.1	Protein Homology	CDS	69451	70194	.	+	0	ID=cds-WP_080083309.1;Parent=gene-C9F00_RS07270;Dbxref=GenBank:WP_080083309.1;Name=WP_080083309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9F00_RS07270;product=DUF3053 domain-containing protein;protein_id=WP_080083309.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	70400	70624	.	+	.	ID=gene-C9F00_RS07275;Name=C9F00_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07275;old_locus_tag=C9F00_07430
NZ_PYKC01000044.1	GeneMarkS-2+	CDS	70400	70624	.	+	0	ID=cds-WP_000528423.1;Parent=gene-C9F00_RS07275;Dbxref=GenBank:WP_000528423.1;Name=WP_000528423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS07275;product=hypothetical protein;protein_id=WP_000528423.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	70696	71280	.	-	.	ID=gene-C9F00_RS07280;Name=C9F00_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07280;old_locus_tag=C9F00_07435
NZ_PYKC01000044.1	Protein Homology	CDS	70696	71280	.	-	0	ID=cds-WP_001137605.1;Parent=gene-C9F00_RS07280;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9F00_RS07280;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	71478	71999	.	+	.	ID=gene-C9F00_RS07285;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9F00_RS07285;old_locus_tag=C9F00_07440
NZ_PYKC01000044.1	Protein Homology	CDS	71478	71999	.	+	0	ID=cds-WP_001174492.1;Parent=gene-C9F00_RS07285;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9F00_RS07285;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	72051	72224	.	+	.	ID=gene-C9F00_RS07290;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9F00_RS07290;old_locus_tag=C9F00_07445
NZ_PYKC01000044.1	Protein Homology	CDS	72051	72224	.	+	0	ID=cds-WP_000290727.1;Parent=gene-C9F00_RS07290;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9F00_RS07290;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	72358	73437	.	+	.	ID=gene-C9F00_RS07295;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9F00_RS07295;old_locus_tag=C9F00_07450
NZ_PYKC01000044.1	Protein Homology	CDS	72358	73437	.	+	0	ID=cds-WP_001518286.1;Parent=gene-C9F00_RS07295;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9F00_RS07295;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	73517	74470	.	+	.	ID=gene-C9F00_RS07300;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9F00_RS07300;old_locus_tag=C9F00_07455
NZ_PYKC01000044.1	Protein Homology	CDS	73517	74470	.	+	0	ID=cds-WP_000288148.1;Parent=gene-C9F00_RS07300;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F00_RS07300;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	74486	75415	.	+	.	ID=gene-C9F00_RS07305;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9F00_RS07305;old_locus_tag=C9F00_07460
NZ_PYKC01000044.1	Protein Homology	CDS	74486	75415	.	+	0	ID=cds-WP_135369039.1;Parent=gene-C9F00_RS07305;Dbxref=GenBank:WP_135369039.1;Name=WP_135369039.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9F00_RS07305;product=ACP S-malonyltransferase;protein_id=WP_135369039.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	75428	76162	.	+	.	ID=gene-C9F00_RS07310;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9F00_RS07310;old_locus_tag=C9F00_07465
NZ_PYKC01000044.1	Protein Homology	CDS	75428	76162	.	+	0	ID=cds-WP_000007236.1;Parent=gene-C9F00_RS07310;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9F00_RS07310;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	76318	76554	.	+	.	ID=gene-C9F00_RS07315;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9F00_RS07315;old_locus_tag=C9F00_07470
NZ_PYKC01000044.1	Protein Homology	CDS	76318	76554	.	+	0	ID=cds-WP_000103754.1;Parent=gene-C9F00_RS07315;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9F00_RS07315;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	76640	77881	.	+	.	ID=gene-C9F00_RS07320;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9F00_RS07320;old_locus_tag=C9F00_07475
NZ_PYKC01000044.1	Protein Homology	CDS	76640	77881	.	+	0	ID=cds-WP_000044664.1;Parent=gene-C9F00_RS07320;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9F00_RS07320;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	78005	78814	.	+	.	ID=gene-C9F00_RS07325;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9F00_RS07325;old_locus_tag=C9F00_07480
NZ_PYKC01000044.1	Protein Homology	CDS	78005	78814	.	+	0	ID=cds-WP_000478660.1;Parent=gene-C9F00_RS07325;Dbxref=GenBank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9F00_RS07325;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	78817	79839	.	+	.	ID=gene-C9F00_RS07330;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9F00_RS07330;old_locus_tag=C9F00_07485
NZ_PYKC01000044.1	Protein Homology	CDS	78817	79839	.	+	0	ID=cds-WP_000736459.1;Parent=gene-C9F00_RS07330;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9F00_RS07330;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	79829	80470	.	+	.	ID=gene-C9F00_RS07335;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9F00_RS07335;old_locus_tag=C9F00_07490
NZ_PYKC01000044.1	Protein Homology	CDS	79829	80470	.	+	0	ID=cds-WP_000535396.1;Parent=gene-C9F00_RS07335;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9F00_RS07335;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	80467	81471	.	+	.	ID=gene-C9F00_RS07340;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9F00_RS07340;old_locus_tag=C9F00_07495
NZ_PYKC01000044.1	Protein Homology	CDS	80467	81471	.	+	0	ID=cds-WP_000872450.1;Parent=gene-C9F00_RS07340;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9F00_RS07340;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	81482	82279	.	+	.	ID=gene-C9F00_RS07345;Name=C9F00_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07345;old_locus_tag=C9F00_07500
NZ_PYKC01000044.1	Protein Homology	CDS	81482	82279	.	+	0	ID=cds-WP_000480268.1;Parent=gene-C9F00_RS07345;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9F00_RS07345;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	82574	84007	.	+	.	ID=gene-C9F00_RS07350;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9F00_RS07350;old_locus_tag=C9F00_07505
NZ_PYKC01000044.1	Protein Homology	CDS	82574	84007	.	+	0	ID=cds-WP_000475708.1;Parent=gene-C9F00_RS07350;Dbxref=GenBank:WP_000475708.1;Name=WP_000475708.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9F00_RS07350;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475708.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	84093	86267	.	-	.	ID=gene-C9F00_RS07355;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=C9F00_RS07355;old_locus_tag=C9F00_07510
NZ_PYKC01000044.1	Protein Homology	CDS	84093	86267	.	-	0	ID=cds-WP_023182047.1;Parent=gene-C9F00_RS07355;Dbxref=GenBank:WP_023182047.1;Name=WP_023182047.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F00_RS07355;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_023182047.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	86609	86968	.	+	.	ID=gene-C9F00_RS07360;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9F00_RS07360;old_locus_tag=C9F00_07515
NZ_PYKC01000044.1	Protein Homology	CDS	86609	86968	.	+	0	ID=cds-WP_001532068.1;Parent=gene-C9F00_RS07360;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9F00_RS07360;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	gene	86971	87345	.	+	.	ID=gene-C9F00_RS07365;Name=C9F00_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS07365;old_locus_tag=C9F00_07520
NZ_PYKC01000044.1	Protein Homology	CDS	86971	87345	.	+	0	ID=cds-WP_000589563.1;Parent=gene-C9F00_RS07365;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9F00_RS07365;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11
NZ_PYKC01000044.1	RefSeq	pseudogene	87359	87536	.	+	.	ID=gene-C9F00_RS07370;Name=C9F00_RS07370;end_range=87536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS07370;old_locus_tag=C9F00_07525;partial=true;pseudo=true
NZ_PYKC01000044.1	Protein Homology	CDS	87359	87536	.	+	0	ID=cds-C9F00_RS07370;Parent=gene-C9F00_RS07370;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=87536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9F00_RS07370;partial=true;product=penicillin-binding protein activator LpoB;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000031.1 1 18363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000031.1	RefSeq	region	1	18363	.	+	.	ID=NZ_PYKC01000031.1:1..18363;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000031.1	RefSeq	gene	1	904	.	+	.	ID=gene-C9F00_RS05355;Name=C9F00_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05355;old_locus_tag=C9F00_05450;partial=true;start_range=.,1
NZ_PYKC01000031.1	Protein Homology	CDS	1	904	.	+	1	ID=cds-WP_135492173.1;Parent=gene-C9F00_RS05355;Dbxref=GenBank:WP_135492173.1;Name=WP_135492173.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331412.1;locus_tag=C9F00_RS05355;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_135492173.1;start_range=.,1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	1000	1143	.	-	.	ID=gene-C9F00_RS05360;Name=C9F00_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05360;old_locus_tag=C9F00_05455
NZ_PYKC01000031.1	Protein Homology	CDS	1000	1143	.	-	0	ID=cds-WP_001541460.1;Parent=gene-C9F00_RS05360;Dbxref=GenBank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9F00_RS05360;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	1110	1274	.	+	.	ID=gene-C9F00_RS05365;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=C9F00_RS05365;old_locus_tag=C9F00_05460
NZ_PYKC01000031.1	Protein Homology	CDS	1110	1274	.	+	0	ID=cds-WP_135369730.1;Parent=gene-C9F00_RS05365;Dbxref=GenBank:WP_135369730.1;Name=WP_135369730.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9F00_RS05365;product=DUF1127 domain-containing protein YjiS;protein_id=WP_135369730.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	1351	2271	.	-	.	ID=gene-C9F00_RS05370;Name=C9F00_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05370;old_locus_tag=C9F00_05465
NZ_PYKC01000031.1	Protein Homology	CDS	1351	2271	.	-	0	ID=cds-WP_135369729.1;Parent=gene-C9F00_RS05370;Dbxref=GenBank:WP_135369729.1;Name=WP_135369729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F00_RS05370;product=DUF5655 domain-containing protein;protein_id=WP_135369729.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	2407	4260	.	+	.	ID=gene-C9F00_RS05375;Name=C9F00_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05375;old_locus_tag=C9F00_05470
NZ_PYKC01000031.1	Protein Homology	CDS	2407	4260	.	+	0	ID=cds-WP_135369728.1;Parent=gene-C9F00_RS05375;Dbxref=GenBank:WP_135369728.1;Name=WP_135369728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9F00_RS05375;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_135369728.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	4305	4625	.	-	.	ID=gene-C9F00_RS05380;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9F00_RS05380;old_locus_tag=C9F00_05475
NZ_PYKC01000031.1	Protein Homology	CDS	4305	4625	.	-	0	ID=cds-WP_135369727.1;Parent=gene-C9F00_RS05380;Dbxref=GenBank:WP_135369727.1;Name=WP_135369727.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=C9F00_RS05380;product=endoribonuclease SymE;protein_id=WP_135369727.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	4842	6557	.	-	.	ID=gene-C9F00_RS05385;Name=C9F00_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05385;old_locus_tag=C9F00_05480
NZ_PYKC01000031.1	Protein Homology	CDS	4842	6557	.	-	0	ID=cds-WP_135420167.1;Parent=gene-C9F00_RS05385;Dbxref=GenBank:WP_135420167.1;Name=WP_135420167.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257593.1;locus_tag=C9F00_RS05385;product=restriction endonuclease subunit S;protein_id=WP_135420167.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	6557	8026	.	-	.	ID=gene-C9F00_RS05390;Name=C9F00_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05390;old_locus_tag=C9F00_05485
NZ_PYKC01000031.1	Protein Homology	CDS	6557	8026	.	-	0	ID=cds-WP_080204212.1;Parent=gene-C9F00_RS05390;Dbxref=GenBank:WP_080204212.1;Name=WP_080204212.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=C9F00_RS05390;product=N-6 DNA methylase;protein_id=WP_080204212.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	8097	10526	.	-	.	ID=gene-C9F00_RS05395;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=C9F00_RS05395;old_locus_tag=C9F00_05490
NZ_PYKC01000031.1	Protein Homology	CDS	8097	10526	.	-	0	ID=cds-WP_135492175.1;Parent=gene-C9F00_RS05395;Dbxref=GenBank:WP_135492175.1;Name=WP_135492175.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9F00_RS05395;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_135492175.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	10668	11636	.	+	.	ID=gene-C9F00_RS05400;Name=C9F00_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05400;old_locus_tag=C9F00_05495
NZ_PYKC01000031.1	Protein Homology	CDS	10668	11636	.	+	0	ID=cds-WP_000452022.1;Parent=gene-C9F00_RS05400;Dbxref=GenBank:WP_000452022.1;Name=WP_000452022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9F00_RS05400;product=hypothetical protein;protein_id=WP_000452022.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	11752	12708	.	-	.	ID=gene-C9F00_RS05405;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9F00_RS05405;old_locus_tag=C9F00_05500
NZ_PYKC01000031.1	Protein Homology	CDS	11752	12708	.	-	0	ID=cds-WP_000187838.1;Parent=gene-C9F00_RS05405;Dbxref=GenBank:WP_000187838.1;Name=WP_000187838.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9F00_RS05405;product=GTPase;protein_id=WP_000187838.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	12719	12922	.	-	.	ID=gene-C9F00_RS05410;Name=C9F00_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05410;old_locus_tag=C9F00_05505
NZ_PYKC01000031.1	Protein Homology	CDS	12719	12922	.	-	0	ID=cds-WP_000460616.1;Parent=gene-C9F00_RS05410;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9F00_RS05410;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	13017	15167	.	-	.	ID=gene-C9F00_RS05415;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9F00_RS05415;old_locus_tag=C9F00_05510
NZ_PYKC01000031.1	Protein Homology	CDS	13017	15167	.	-	0	ID=cds-WP_000379929.1;Parent=gene-C9F00_RS05415;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9F00_RS05415;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	15534	17195	.	+	.	ID=gene-C9F00_RS05420;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9F00_RS05420;old_locus_tag=C9F00_05515
NZ_PYKC01000031.1	Protein Homology	CDS	15534	17195	.	+	0	ID=cds-WP_000919511.1;Parent=gene-C9F00_RS05420;Dbxref=GenBank:WP_000919511.1;Name=WP_000919511.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9F00_RS05420;product=methyl-accepting chemotaxis protein;protein_id=WP_000919511.1;transl_table=11
NZ_PYKC01000031.1	RefSeq	gene	17519	18363	.	+	.	ID=gene-C9F00_RS05430;Name=C9F00_RS05430;end_range=18363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05430;old_locus_tag=C9F00_05520;partial=true
NZ_PYKC01000031.1	Protein Homology	CDS	17519	18363	.	+	0	ID=cds-WP_135492177.1;Parent=gene-C9F00_RS05430;Dbxref=GenBank:WP_135492177.1;Name=WP_135492177.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;end_range=18363,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F00_RS05430;partial=true;product=sigma 54-interacting transcriptional regulator;protein_id=WP_135492177.1;transl_table=11
##sequence-region NZ_PYKC01000117.1 1 18324
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000117.1	RefSeq	region	1	18324	.	+	.	ID=NZ_PYKC01000117.1:1..18324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000117.1	RefSeq	gene	764	2002	.	+	.	ID=gene-C9F00_RS18135;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9F00_RS18135;old_locus_tag=C9F00_18580
NZ_PYKC01000117.1	Protein Homology	CDS	764	2002	.	+	0	ID=cds-WP_000763118.1;Parent=gene-C9F00_RS18135;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9F00_RS18135;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	2052	2123	.	-	.	ID=gene-C9F00_RS18140;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9F00_RS18140;old_locus_tag=C9F00_18585
NZ_PYKC01000117.1	Protein Homology	CDS	2052	2123	.	-	0	ID=cds-WP_010723117.1;Parent=gene-C9F00_RS18140;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9F00_RS18140;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	2526	3446	.	-	.	ID=gene-C9F00_RS18145;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9F00_RS18145;old_locus_tag=C9F00_18590
NZ_PYKC01000117.1	Protein Homology	CDS	2526	3446	.	-	0	ID=cds-WP_135492426.1;Parent=gene-C9F00_RS18145;Dbxref=GenBank:WP_135492426.1;Name=WP_135492426.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9F00_RS18145;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_135492426.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	3968	4210	.	+	.	ID=gene-C9F00_RS18150;Name=C9F00_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18150;old_locus_tag=C9F00_18595
NZ_PYKC01000117.1	Protein Homology	CDS	3968	4210	.	+	0	ID=cds-WP_000639889.1;Parent=gene-C9F00_RS18150;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9F00_RS18150;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	4486	5877	.	-	.	ID=gene-C9F00_RS18155;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9F00_RS18155;old_locus_tag=C9F00_18600
NZ_PYKC01000117.1	Protein Homology	CDS	4486	5877	.	-	0	ID=cds-WP_020437486.1;Parent=gene-C9F00_RS18155;Dbxref=GenBank:WP_020437486.1;Name=WP_020437486.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9F00_RS18155;product=phosphoglycerate transporter PgtP;protein_id=WP_020437486.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	6313	7506	.	+	.	ID=gene-C9F00_RS18165;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9F00_RS18165;old_locus_tag=C9F00_18610
NZ_PYKC01000117.1	Protein Homology	CDS	6313	7506	.	+	0	ID=cds-WP_000467983.1;Parent=gene-C9F00_RS18165;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9F00_RS18165;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	7503	9509	.	+	.	ID=gene-C9F00_RS18170;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9F00_RS18170;old_locus_tag=C9F00_18615
NZ_PYKC01000117.1	Protein Homology	CDS	7503	9509	.	+	0	ID=cds-WP_000678495.1;Parent=gene-C9F00_RS18170;Dbxref=GenBank:WP_000678495.1;Name=WP_000678495.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9F00_RS18170;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678495.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	9499	10746	.	+	.	ID=gene-C9F00_RS18175;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9F00_RS18175;old_locus_tag=C9F00_18620
NZ_PYKC01000117.1	Protein Homology	CDS	9499	10746	.	+	0	ID=cds-WP_052932207.1;Parent=gene-C9F00_RS18175;Dbxref=GenBank:WP_052932207.1;Name=WP_052932207.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9F00_RS18175;product=two-component system response regulator PgtA;protein_id=WP_052932207.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	11014	11952	.	+	.	ID=gene-C9F00_RS18180;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9F00_RS18180;old_locus_tag=C9F00_18625
NZ_PYKC01000117.1	Protein Homology	CDS	11014	11952	.	+	0	ID=cds-WP_023244699.1;Parent=gene-C9F00_RS18180;Dbxref=GenBank:WP_023244699.1;Name=WP_023244699.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9F00_RS18180;product=omptin family outer membrane protease PgtE;protein_id=WP_023244699.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	12696	13325	.	-	.	ID=gene-C9F00_RS18185;Name=C9F00_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18185;old_locus_tag=C9F00_18630
NZ_PYKC01000117.1	GeneMarkS-2+	CDS	12696	13325	.	-	0	ID=cds-WP_063808707.1;Parent=gene-C9F00_RS18185;Dbxref=GenBank:WP_063808707.1;Name=WP_063808707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS18185;product=hypothetical protein;protein_id=WP_063808707.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	13322	15343	.	-	.	ID=gene-C9F00_RS18190;Name=C9F00_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18190;old_locus_tag=C9F00_18635
NZ_PYKC01000117.1	Protein Homology	CDS	13322	15343	.	-	0	ID=cds-WP_063808708.1;Parent=gene-C9F00_RS18190;Dbxref=GenBank:WP_063808708.1;Name=WP_063808708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093896.1;locus_tag=C9F00_RS18190;product=DEAD/DEAH box helicase;protein_id=WP_063808708.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	15784	16056	.	-	.	ID=gene-C9F00_RS18195;Name=C9F00_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18195;old_locus_tag=C9F00_18640
NZ_PYKC01000117.1	Protein Homology	CDS	15784	16056	.	-	0	ID=cds-WP_001185339.1;Parent=gene-C9F00_RS18195;Dbxref=GenBank:WP_001185339.1;Name=WP_001185339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=C9F00_RS18195;product=ogr/Delta-like zinc finger family protein;protein_id=WP_001185339.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	16056	16817	.	-	.	ID=gene-C9F00_RS18200;Name=C9F00_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18200;old_locus_tag=C9F00_18645
NZ_PYKC01000117.1	Protein Homology	CDS	16056	16817	.	-	0	ID=cds-WP_135369715.1;Parent=gene-C9F00_RS18200;Dbxref=GenBank:WP_135369715.1;Name=WP_135369715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=C9F00_RS18200;product=septation initiation protein;protein_id=WP_135369715.1;transl_table=11
NZ_PYKC01000117.1	RefSeq	gene	17219	18324	.	-	.	ID=gene-C9F00_RS18205;Name=C9F00_RS18205;end_range=18324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS18205;old_locus_tag=C9F00_18650;partial=true
NZ_PYKC01000117.1	Protein Homology	CDS	17219	18324	.	-	2	ID=cds-WP_135492428.1;Parent=gene-C9F00_RS18205;Dbxref=GenBank:WP_135492428.1;Name=WP_135492428.1;end_range=18324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F00_RS18205;partial=true;product=DUF927 domain-containing protein;protein_id=WP_135492428.1;transl_table=11
##sequence-region NZ_PYKC01000134.1 1 18246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000134.1	RefSeq	region	1	18246	.	+	.	ID=NZ_PYKC01000134.1:1..18246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000134.1	RefSeq	pseudogene	1	1471	.	-	.	ID=gene-C9F00_RS20340;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=pseudogene;locus_tag=C9F00_RS20340;old_locus_tag=C9F00_20810;partial=true;pseudo=true;start_range=.,1
NZ_PYKC01000134.1	Protein Homology	CDS	1	1471	.	-	0	ID=cds-C9F00_RS20340;Parent=gene-C9F00_RS20340;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F00_RS20340;partial=true;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	1570	2679	.	+	.	ID=gene-C9F00_RS20345;Name=C9F00_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20345;old_locus_tag=C9F00_20815
NZ_PYKC01000134.1	Protein Homology	CDS	1570	2679	.	+	0	ID=cds-WP_000224073.1;Parent=gene-C9F00_RS20345;Dbxref=GenBank:WP_000224073.1;Name=WP_000224073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9F00_RS20345;product=YcbX family protein;protein_id=WP_000224073.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	2676	3218	.	-	.	ID=gene-C9F00_RS20350;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9F00_RS20350;old_locus_tag=C9F00_20820
NZ_PYKC01000134.1	Protein Homology	CDS	2676	3218	.	-	0	ID=cds-WP_135369159.1;Parent=gene-C9F00_RS20350;Dbxref=GenBank:WP_135369159.1;Name=WP_135369159.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9F00_RS20350;product=cell division protein ZapC;protein_id=WP_135369159.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	3384	4394	.	-	.	ID=gene-C9F00_RS20355;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9F00_RS20355;old_locus_tag=C9F00_20825
NZ_PYKC01000134.1	Protein Homology	CDS	3384	4394	.	-	0	ID=cds-WP_000291723.1;Parent=gene-C9F00_RS20355;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F00_RS20355;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	4602	7214	.	-	.	ID=gene-C9F00_RS20360;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9F00_RS20360;old_locus_tag=C9F00_20830
NZ_PYKC01000134.1	Protein Homology	CDS	4602	7214	.	-	0	ID=cds-WP_135369160.1;Parent=gene-C9F00_RS20360;Dbxref=GenBank:WP_135369160.1;Name=WP_135369160.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F00_RS20360;product=aminopeptidase N;protein_id=WP_135369160.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	7481	8683	.	+	.	ID=gene-C9F00_RS20365;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9F00_RS20365;old_locus_tag=C9F00_20835
NZ_PYKC01000134.1	Protein Homology	CDS	7481	8683	.	+	0	ID=cds-WP_000191404.1;Parent=gene-C9F00_RS20365;Dbxref=GenBank:WP_000191404.1;Name=WP_000191404.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9F00_RS20365;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191404.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	8764	10197	.	-	.	ID=gene-C9F00_RS20370;Name=C9F00_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20370;old_locus_tag=C9F00_20840
NZ_PYKC01000134.1	Protein Homology	CDS	8764	10197	.	-	0	ID=cds-WP_000893197.1;Parent=gene-C9F00_RS20370;Dbxref=GenBank:WP_000893197.1;Name=WP_000893197.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=C9F00_RS20370;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893197.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	10443	11657	.	-	.	ID=gene-C9F00_RS20375;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9F00_RS20375;old_locus_tag=C9F00_20845
NZ_PYKC01000134.1	Protein Homology	CDS	10443	11657	.	-	0	ID=cds-WP_000544848.1;Parent=gene-C9F00_RS20375;Dbxref=GenBank:WP_000544848.1;Name=WP_000544848.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9F00_RS20375;product=diaminopropionate ammonia-lyase;protein_id=WP_000544848.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	11974	12435	.	+	.	ID=gene-C9F00_RS20385;Name=C9F00_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20385;old_locus_tag=C9F00_20855
NZ_PYKC01000134.1	Protein Homology	CDS	11974	12435	.	+	0	ID=cds-WP_000762342.1;Parent=gene-C9F00_RS20385;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9F00_RS20385;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	12636	14036	.	+	.	ID=gene-C9F00_RS20390;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9F00_RS20390;old_locus_tag=C9F00_20860
NZ_PYKC01000134.1	Protein Homology	CDS	12636	14036	.	+	0	ID=cds-WP_000117870.1;Parent=gene-C9F00_RS20390;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9F00_RS20390;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	14642	15733	.	+	.	ID=gene-C9F00_RS20395;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9F00_RS20395;old_locus_tag=C9F00_20865
NZ_PYKC01000134.1	Protein Homology	CDS	14642	15733	.	+	0	ID=cds-WP_000977709.1;Parent=gene-C9F00_RS20395;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9F00_RS20395;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	15918	17108	.	+	.	ID=gene-C9F00_RS20400;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9F00_RS20400;old_locus_tag=C9F00_20870
NZ_PYKC01000134.1	Protein Homology	CDS	15918	17108	.	+	0	ID=cds-WP_000462653.1;Parent=gene-C9F00_RS20400;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9F00_RS20400;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	gene	17170	17817	.	-	.	ID=gene-C9F00_RS20405;Name=C9F00_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20405;old_locus_tag=C9F00_20875
NZ_PYKC01000134.1	Protein Homology	CDS	17170	17817	.	-	0	ID=cds-WP_001109471.1;Parent=gene-C9F00_RS20405;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9F00_RS20405;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11
NZ_PYKC01000134.1	RefSeq	pseudogene	17845	18165	.	-	.	ID=gene-C9F00_RS20410;Name=C9F00_RS20410;end_range=18165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS20410;old_locus_tag=C9F00_20880;partial=true;pseudo=true
NZ_PYKC01000134.1	Protein Homology	CDS	17845	18165	.	-	0	ID=cds-C9F00_RS20410;Parent=gene-C9F00_RS20410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F00_RS20410;partial=true;product=YcbK family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000037.1 1 17694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000037.1	RefSeq	region	1	17694	.	+	.	ID=NZ_PYKC01000037.1:1..17694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000037.1	RefSeq	gene	1	855	.	-	.	ID=gene-C9F00_RS05945;Name=C9F00_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05945;old_locus_tag=C9F00_06050;partial=true;start_range=.,1
NZ_PYKC01000037.1	Protein Homology	CDS	1	855	.	-	0	ID=cds-WP_245306380.1;Parent=gene-C9F00_RS05945;Dbxref=GenBank:WP_245306380.1;Name=WP_245306380.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F00_RS05945;partial=true;product=2-isopropylmalate synthase;protein_id=WP_245306380.1;start_range=.,1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	943	1029	.	-	.	ID=gene-C9F00_RS05950;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9F00_RS05950;old_locus_tag=C9F00_06055
NZ_PYKC01000037.1	Protein Homology	CDS	943	1029	.	-	0	ID=cds-WP_001575587.1;Parent=gene-C9F00_RS05950;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9F00_RS05950;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	1686	2630	.	+	.	ID=gene-C9F00_RS05955;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9F00_RS05955;old_locus_tag=C9F00_06060
NZ_PYKC01000037.1	Protein Homology	CDS	1686	2630	.	+	0	ID=cds-WP_001115420.1;Parent=gene-C9F00_RS05955;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9F00_RS05955;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	2952	4676	.	+	.	ID=gene-C9F00_RS05960;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9F00_RS05960;old_locus_tag=C9F00_06065
NZ_PYKC01000037.1	Protein Homology	CDS	2952	4676	.	+	0	ID=cds-WP_000425619.1;Parent=gene-C9F00_RS05960;Dbxref=GenBank:WP_000425619.1;Name=WP_000425619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9F00_RS05960;product=acetolactate synthase 3 large subunit;protein_id=WP_000425619.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	4679	5170	.	+	.	ID=gene-C9F00_RS05965;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9F00_RS05965;old_locus_tag=C9F00_06070
NZ_PYKC01000037.1	Protein Homology	CDS	4679	5170	.	+	0	ID=cds-WP_001563086.1;Parent=gene-C9F00_RS05965;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9F00_RS05965;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	5454	6458	.	+	.	ID=gene-C9F00_RS05970;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9F00_RS05970;old_locus_tag=C9F00_06075
NZ_PYKC01000037.1	Protein Homology	CDS	5454	6458	.	+	0	ID=cds-WP_000762406.1;Parent=gene-C9F00_RS05970;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9F00_RS05970;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	7064	7522	.	+	.	ID=gene-C9F00_RS05975;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9F00_RS05975;old_locus_tag=C9F00_06080
NZ_PYKC01000037.1	Protein Homology	CDS	7064	7522	.	+	0	ID=cds-WP_135369127.1;Parent=gene-C9F00_RS05975;Dbxref=GenBank:WP_135369127.1;Name=WP_135369127.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9F00_RS05975;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_135369127.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	7524	8465	.	+	.	ID=gene-C9F00_RS05980;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9F00_RS05980;old_locus_tag=C9F00_06085
NZ_PYKC01000037.1	Protein Homology	CDS	7524	8465	.	+	0	ID=cds-WP_000970444.1;Parent=gene-C9F00_RS05980;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9F00_RS05980;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	8462	8827	.	+	.	ID=gene-C9F00_RS05985;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9F00_RS05985;old_locus_tag=C9F00_06090
NZ_PYKC01000037.1	Protein Homology	CDS	8462	8827	.	+	0	ID=cds-WP_000625651.1;Parent=gene-C9F00_RS05985;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9F00_RS05985;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	8843	10609	.	+	.	ID=gene-C9F00_RS05990;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9F00_RS05990;old_locus_tag=C9F00_06095
NZ_PYKC01000037.1	Protein Homology	CDS	8843	10609	.	+	0	ID=cds-WP_000642235.1;Parent=gene-C9F00_RS05990;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F00_RS05990;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	10596	12083	.	+	.	ID=gene-C9F00_RS05995;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9F00_RS05995;old_locus_tag=C9F00_06100
NZ_PYKC01000037.1	Protein Homology	CDS	10596	12083	.	+	0	ID=cds-WP_080214024.1;Parent=gene-C9F00_RS05995;Dbxref=GenBank:WP_080214024.1;Name=WP_080214024.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9F00_RS05995;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080214024.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	12080	13438	.	+	.	ID=gene-C9F00_RS06000;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9F00_RS06000;old_locus_tag=C9F00_06105
NZ_PYKC01000037.1	Protein Homology	CDS	12080	13438	.	+	0	ID=cds-WP_000626637.1;Parent=gene-C9F00_RS06000;Dbxref=GenBank:WP_000626637.1;Name=WP_000626637.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9F00_RS06000;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626637.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	13432	14514	.	+	.	ID=gene-C9F00_RS06005;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=C9F00_RS06005;old_locus_tag=C9F00_06110
NZ_PYKC01000037.1	Protein Homology	CDS	13432	14514	.	+	0	ID=cds-WP_000964138.1;Parent=gene-C9F00_RS06005;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F00_RS06005;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	14517	15833	.	+	.	ID=gene-C9F00_RS06010;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9F00_RS06010;old_locus_tag=C9F00_06115
NZ_PYKC01000037.1	Protein Homology	CDS	14517	15833	.	+	0	ID=cds-WP_135492202.1;Parent=gene-C9F00_RS06010;Dbxref=GenBank:WP_135492202.1;Name=WP_135492202.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F00_RS06010;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_135492202.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	15833	17077	.	+	.	ID=gene-C9F00_RS06015;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9F00_RS06015;old_locus_tag=C9F00_06120
NZ_PYKC01000037.1	Protein Homology	CDS	15833	17077	.	+	0	ID=cds-WP_001239803.1;Parent=gene-C9F00_RS06015;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9F00_RS06015;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11
NZ_PYKC01000037.1	RefSeq	gene	17074	17694	.	+	.	ID=gene-C9F00_RS06020;Name=C9F00_RS06020;end_range=17694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS06020;old_locus_tag=C9F00_06125;partial=true
NZ_PYKC01000037.1	Protein Homology	CDS	17074	17694	.	+	0	ID=cds-WP_135492204.1;Parent=gene-C9F00_RS06020;Dbxref=GenBank:WP_135492204.1;Name=WP_135492204.1;Ontology_term=GO:0005975,GO:0007049,GO:0008360,GO:0009252,GO:0030259,GO:0051301,GO:0071555,GO:0050511,GO:0051991,GO:0005886;end_range=17694,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA,UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2%2C6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity|0051991||IEA;go_process=carbohydrate metabolic process|0005975||IEA,cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,lipid glycosylation|0030259||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F00_RS06020;partial=true;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_135492204.1;transl_table=11
##sequence-region NZ_PYKC01000064.1 1 17382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000064.1	RefSeq	region	1	17382	.	+	.	ID=NZ_PYKC01000064.1:1..17382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000064.1	RefSeq	pseudogene	94	285	.	-	.	ID=gene-C9F00_RS11310;Name=C9F00_RS11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS11310;old_locus_tag=C9F00_11580;partial=true;pseudo=true;start_range=.,94
NZ_PYKC01000064.1	Protein Homology	CDS	94	285	.	-	0	ID=cds-C9F00_RS11310;Parent=gene-C9F00_RS11310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9F00_RS11310;partial=true;product=solute carrier family 23 protein;pseudo=true;start_range=.,94;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	632	1300	.	-	.	ID=gene-C9F00_RS11315;Name=C9F00_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11315;old_locus_tag=C9F00_11590
NZ_PYKC01000064.1	Protein Homology	CDS	632	1300	.	-	0	ID=cds-WP_135492293.1;Parent=gene-C9F00_RS11315;Dbxref=GenBank:WP_135492293.1;Name=WP_135492293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9F00_RS11315;product=glutathione S-transferase family protein;protein_id=WP_135492293.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	1593	2051	.	-	.	ID=gene-C9F00_RS11320;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9F00_RS11320;old_locus_tag=C9F00_11595
NZ_PYKC01000064.1	Protein Homology	CDS	1593	2051	.	-	0	ID=cds-WP_000412686.1;Parent=gene-C9F00_RS11320;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9F00_RS11320;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	2138	2461	.	+	.	ID=gene-C9F00_RS11325;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9F00_RS11325;old_locus_tag=C9F00_11600
NZ_PYKC01000064.1	Protein Homology	CDS	2138	2461	.	+	0	ID=cds-WP_000019483.1;Parent=gene-C9F00_RS11325;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9F00_RS11325;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	2449	4050	.	-	.	ID=gene-C9F00_RS11330;Name=C9F00_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11330;old_locus_tag=C9F00_11605
NZ_PYKC01000064.1	Protein Homology	CDS	2449	4050	.	-	0	ID=cds-WP_020437586.1;Parent=gene-C9F00_RS11330;Dbxref=GenBank:WP_020437586.1;Name=WP_020437586.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9F00_RS11330;product=EAL domain-containing protein;protein_id=WP_020437586.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	4612	4893	.	+	.	ID=gene-C9F00_RS11335;Name=C9F00_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS11335;old_locus_tag=C9F00_11610
NZ_PYKC01000064.1	Protein Homology	CDS	4612	4893	.	+	0	ID=cds-WP_000719058.1;Parent=gene-C9F00_RS11335;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9F00_RS11335;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	gene	5171	7237	.	-	.	ID=gene-C9F00_RS11340;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=C9F00_RS11340;old_locus_tag=C9F00_11615
NZ_PYKC01000064.1	Protein Homology	CDS	5171	7237	.	-	0	ID=cds-WP_000358582.1;Parent=gene-C9F00_RS11340;Dbxref=GenBank:WP_000358582.1;Name=WP_000358582.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9F00_RS11340;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358582.1;transl_table=11
NZ_PYKC01000064.1	RefSeq	pseudogene	7277	17382	.	-	.	ID=gene-C9F00_RS11345;Name=siiE;end_range=17382,.;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=C9F00_RS11345;old_locus_tag=C9F00_11620;partial=true;pseudo=true
NZ_PYKC01000064.1	Protein Homology	CDS	7277	17382	.	-	2	ID=cds-C9F00_RS11345;Parent=gene-C9F00_RS11345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=17382,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F00_RS11345;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;transl_table=11
##sequence-region NZ_PYKC01000025.1 1 17151
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000025.1	RefSeq	region	1	17151	.	+	.	ID=NZ_PYKC01000025.1:1..17151;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000025.1	RefSeq	gene	1	333	.	-	.	ID=gene-C9F00_RS04540;Name=C9F00_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04540;old_locus_tag=C9F00_04610;partial=true;start_range=.,1
NZ_PYKC01000025.1	Protein Homology	CDS	1	333	.	-	0	ID=cds-WP_135492145.1;Parent=gene-C9F00_RS04540;Dbxref=GenBank:WP_135492145.1;Name=WP_135492145.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9F00_RS04540;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_135492145.1;start_range=.,1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	330	1733	.	-	.	ID=gene-C9F00_RS04545;Name=C9F00_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04545;old_locus_tag=C9F00_04615
NZ_PYKC01000025.1	Protein Homology	CDS	330	1733	.	-	0	ID=cds-WP_000393711.1;Parent=gene-C9F00_RS04545;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9F00_RS04545;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	1850	1951	.	-	.	ID=gene-C9F00_RS04550;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9F00_RS04550;old_locus_tag=C9F00_04620
NZ_PYKC01000025.1	Protein Homology	CDS	1850	1951	.	-	0	ID=cds-WP_000934834.1;Parent=gene-C9F00_RS04550;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9F00_RS04550;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	2228	5200	.	-	.	ID=gene-C9F00_RS04555;Name=C9F00_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04555;old_locus_tag=C9F00_04625
NZ_PYKC01000025.1	Protein Homology	CDS	2228	5200	.	-	0	ID=cds-WP_077907133.1;Parent=gene-C9F00_RS04555;Dbxref=GenBank:WP_077907133.1;Name=WP_077907133.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F00_RS04555;product=type III restriction-modification system endonuclease;protein_id=WP_077907133.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	5210	7168	.	-	.	ID=gene-C9F00_RS04560;Name=C9F00_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04560;old_locus_tag=C9F00_04630
NZ_PYKC01000025.1	Protein Homology	CDS	5210	7168	.	-	0	ID=cds-WP_000910349.1;Parent=gene-C9F00_RS04560;Dbxref=GenBank:WP_000910349.1;Name=WP_000910349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9F00_RS04560;product=site-specific DNA-methyltransferase;protein_id=WP_000910349.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	7357	8610	.	-	.	ID=gene-C9F00_RS04565;Name=C9F00_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04565;old_locus_tag=C9F00_04635
NZ_PYKC01000025.1	Protein Homology	CDS	7357	8610	.	-	0	ID=cds-WP_000288502.1;Parent=gene-C9F00_RS04565;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9F00_RS04565;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	8902	9096	.	-	.	ID=gene-C9F00_RS04570;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9F00_RS04570;old_locus_tag=C9F00_04640
NZ_PYKC01000025.1	Protein Homology	CDS	8902	9096	.	-	0	ID=cds-WP_001159470.1;Parent=gene-C9F00_RS04570;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9F00_RS04570;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	9174	9638	.	-	.	ID=gene-C9F00_RS04575;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9F00_RS04575;old_locus_tag=C9F00_04645
NZ_PYKC01000025.1	Protein Homology	CDS	9174	9638	.	-	0	ID=cds-WP_001020583.1;Parent=gene-C9F00_RS04575;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9F00_RS04575;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	9650	11938	.	-	.	ID=gene-C9F00_RS04580;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9F00_RS04580;old_locus_tag=C9F00_04650
NZ_PYKC01000025.1	Protein Homology	CDS	9650	11938	.	-	0	ID=cds-WP_080232284.1;Parent=gene-C9F00_RS04580;Dbxref=GenBank:WP_080232284.1;Name=WP_080232284.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=C9F00_RS04580;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_080232284.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	12215	13441	.	+	.	ID=gene-C9F00_RS04585;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9F00_RS04585;old_locus_tag=C9F00_04655
NZ_PYKC01000025.1	Protein Homology	CDS	12215	13441	.	+	0	ID=cds-WP_135369139.1;Parent=gene-C9F00_RS04585;Dbxref=GenBank:WP_135369139.1;Name=WP_135369139.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9F00_RS04585;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_135369139.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	13438	16605	.	+	.	ID=gene-C9F00_RS04590;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=C9F00_RS04590;old_locus_tag=C9F00_04660
NZ_PYKC01000025.1	Protein Homology	CDS	13438	16605	.	+	0	ID=cds-WP_135492147.1;Parent=gene-C9F00_RS04590;Dbxref=GenBank:WP_135492147.1;Name=WP_135492147.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F00_RS04590;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_135492147.1;transl_table=11
NZ_PYKC01000025.1	RefSeq	gene	16622	17151	.	+	.	ID=gene-C9F00_RS04595;Name=C9F00_RS04595;end_range=17151,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS04595;old_locus_tag=C9F00_04665;partial=true
NZ_PYKC01000025.1	Protein Homology	CDS	16622	17151	.	+	0	ID=cds-WP_167850714.1;Parent=gene-C9F00_RS04595;Dbxref=GenBank:WP_167850714.1;Name=WP_167850714.1;Ontology_term=GO:0055085,GO:0015562;end_range=17151,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9F00_RS04595;partial=true;product=TolC family protein;protein_id=WP_167850714.1;transl_table=11
##sequence-region NZ_PYKC01000007.1 1 16384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000007.1	RefSeq	region	1	16384	.	+	.	ID=NZ_PYKC01000007.1:1..16384;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000007.1	RefSeq	gene	398	1987	.	+	.	ID=gene-C9F00_RS01780;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9F00_RS01780;old_locus_tag=C9F00_01810
NZ_PYKC01000007.1	Protein Homology	CDS	398	1987	.	+	0	ID=cds-WP_135369432.1;Parent=gene-C9F00_RS01780;Dbxref=GenBank:WP_135369432.1;Name=WP_135369432.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9F00_RS01780;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_135369432.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	1999	3288	.	+	.	ID=gene-C9F00_RS01785;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9F00_RS01785;old_locus_tag=C9F00_01815
NZ_PYKC01000007.1	Protein Homology	CDS	1999	3288	.	+	0	ID=cds-WP_079950073.1;Parent=gene-C9F00_RS01785;Dbxref=GenBank:WP_079950073.1;Name=WP_079950073.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9F00_RS01785;product=phosphoribosylamine--glycine ligase;protein_id=WP_079950073.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	3285	4610	.	-	.	ID=gene-C9F00_RS01790;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=C9F00_RS01790;old_locus_tag=C9F00_01820
NZ_PYKC01000007.1	Protein Homology	CDS	3285	4610	.	-	0	ID=cds-WP_135369431.1;Parent=gene-C9F00_RS01790;Dbxref=GenBank:WP_135369431.1;Name=WP_135369431.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9F00_RS01790;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_135369431.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	4616	6013	.	-	.	ID=gene-C9F00_RS01795;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9F00_RS01795;old_locus_tag=C9F00_01825
NZ_PYKC01000007.1	Protein Homology	CDS	4616	6013	.	-	0	ID=cds-WP_001621492.1;Parent=gene-C9F00_RS01795;Dbxref=GenBank:WP_001621492.1;Name=WP_001621492.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9F00_RS01795;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001621492.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	6267	6722	.	+	.	ID=gene-C9F00_RS01800;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9F00_RS01800;old_locus_tag=C9F00_01830
NZ_PYKC01000007.1	Protein Homology	CDS	6267	6722	.	+	0	ID=cds-WP_135369430.1;Parent=gene-C9F00_RS01800;Dbxref=GenBank:WP_135369430.1;Name=WP_135369430.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9F00_RS01800;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_135369430.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	6764	7456	.	-	.	ID=gene-C9F00_RS01805;Name=C9F00_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01805;old_locus_tag=C9F00_01835
NZ_PYKC01000007.1	Protein Homology	CDS	6764	7456	.	-	0	ID=cds-WP_001083940.1;Parent=gene-C9F00_RS01805;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9F00_RS01805;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	7468	7740	.	-	.	ID=gene-C9F00_RS01810;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9F00_RS01810;old_locus_tag=C9F00_01840
NZ_PYKC01000007.1	Protein Homology	CDS	7468	7740	.	-	0	ID=cds-WP_001044509.1;Parent=gene-C9F00_RS01810;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9F00_RS01810;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	7927	8517	.	-	.	ID=gene-C9F00_RS01815;Name=C9F00_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01815;old_locus_tag=C9F00_01845
NZ_PYKC01000007.1	Protein Homology	CDS	7927	8517	.	-	0	ID=cds-WP_000940092.1;Parent=gene-C9F00_RS01815;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9F00_RS01815;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	8559	9230	.	-	.	ID=gene-C9F00_RS01820;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9F00_RS01820;old_locus_tag=C9F00_01850
NZ_PYKC01000007.1	Protein Homology	CDS	8559	9230	.	-	0	ID=cds-WP_000362363.1;Parent=gene-C9F00_RS01820;Dbxref=GenBank:WP_000362363.1;Name=WP_000362363.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9F00_RS01820;product=deoxyribonuclease V;protein_id=WP_000362363.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	9240	10304	.	-	.	ID=gene-C9F00_RS01825;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9F00_RS01825;old_locus_tag=C9F00_01855
NZ_PYKC01000007.1	Protein Homology	CDS	9240	10304	.	-	0	ID=cds-WP_135369429.1;Parent=gene-C9F00_RS01825;Dbxref=GenBank:WP_135369429.1;Name=WP_135369429.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9F00_RS01825;product=uroporphyrinogen decarboxylase;protein_id=WP_135369429.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	10345	11118	.	-	.	ID=gene-C9F00_RS01830;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9F00_RS01830;old_locus_tag=C9F00_01860
NZ_PYKC01000007.1	Protein Homology	CDS	10345	11118	.	-	0	ID=cds-WP_135369428.1;Parent=gene-C9F00_RS01830;Dbxref=GenBank:WP_135369428.1;Name=WP_135369428.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9F00_RS01830;product=NAD(+) diphosphatase;protein_id=WP_135369428.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	11211	11699	.	+	.	ID=gene-C9F00_RS01835;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9F00_RS01835;old_locus_tag=C9F00_01865
NZ_PYKC01000007.1	Protein Homology	CDS	11211	11699	.	+	0	ID=cds-WP_000934315.1;Parent=gene-C9F00_RS01835;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9F00_RS01835;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	12064	13959	.	+	.	ID=gene-C9F00_RS01840;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9F00_RS01840;old_locus_tag=C9F00_01870
NZ_PYKC01000007.1	Protein Homology	CDS	12064	13959	.	+	0	ID=cds-WP_135492095.1;Parent=gene-C9F00_RS01840;Dbxref=GenBank:WP_135492095.1;Name=WP_135492095.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=C9F00_RS01840;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_135492095.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	13959	14594	.	+	.	ID=gene-C9F00_RS01845;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9F00_RS01845;old_locus_tag=C9F00_01875
NZ_PYKC01000007.1	Protein Homology	CDS	13959	14594	.	+	0	ID=cds-WP_135369426.1;Parent=gene-C9F00_RS01845;Dbxref=GenBank:WP_135369426.1;Name=WP_135369426.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9F00_RS01845;product=thiamine phosphate synthase;protein_id=WP_135369426.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	14587	15345	.	+	.	ID=gene-C9F00_RS01850;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=C9F00_RS01850;old_locus_tag=C9F00_01880
NZ_PYKC01000007.1	Protein Homology	CDS	14587	15345	.	+	0	ID=cds-WP_135369425.1;Parent=gene-C9F00_RS01850;Dbxref=GenBank:WP_135369425.1;Name=WP_135369425.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9F00_RS01850;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_135369425.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	15326	15526	.	+	.	ID=gene-C9F00_RS01855;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9F00_RS01855;old_locus_tag=C9F00_01885
NZ_PYKC01000007.1	Protein Homology	CDS	15326	15526	.	+	0	ID=cds-WP_001166842.1;Parent=gene-C9F00_RS01855;Dbxref=GenBank:WP_001166842.1;Name=WP_001166842.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9F00_RS01855;product=sulfur carrier protein ThiS;protein_id=WP_001166842.1;transl_table=11
NZ_PYKC01000007.1	RefSeq	gene	15528	16310	.	+	.	ID=gene-C9F00_RS01860;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9F00_RS01860;old_locus_tag=C9F00_01890
NZ_PYKC01000007.1	Protein Homology	CDS	15528	16310	.	+	0	ID=cds-WP_135492097.1;Parent=gene-C9F00_RS01860;Dbxref=GenBank:WP_135492097.1;Name=WP_135492097.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9F00_RS01860;product=thiazole synthase;protein_id=WP_135492097.1;transl_table=11
##sequence-region NZ_PYKC01000006.1 1 16118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000006.1	RefSeq	region	1	16118	.	+	.	ID=NZ_PYKC01000006.1:1..16118;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000006.1	RefSeq	gene	1	528	.	+	.	ID=gene-C9F00_RS24285;Name=C9F00_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24285;partial=true;start_range=.,1
NZ_PYKC01000006.1	Protein Homology	CDS	1	528	.	+	0	ID=cds-WP_280953376.1;Parent=gene-C9F00_RS24285;Dbxref=GenBank:WP_280953376.1;Name=WP_280953376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539107.1;locus_tag=C9F00_RS24285;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_280953376.1;start_range=.,1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	522	1133	.	+	.	ID=gene-C9F00_RS01670;Name=C9F00_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01670;old_locus_tag=C9F00_01705
NZ_PYKC01000006.1	GeneMarkS-2+	CDS	522	1133	.	+	0	ID=cds-WP_135420260.1;Parent=gene-C9F00_RS01670;Dbxref=GenBank:WP_135420260.1;Name=WP_135420260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS01670;product=hypothetical protein;protein_id=WP_135420260.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	pseudogene	1277	1726	.	+	.	ID=gene-C9F00_RS01675;Name=C9F00_RS01675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS01675;old_locus_tag=C9F00_01710;partial=true;pseudo=true;start_range=.,1277
NZ_PYKC01000006.1	Protein Homology	CDS	1277	1726	.	+	0	ID=cds-C9F00_RS01675;Parent=gene-C9F00_RS01675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503220.1;locus_tag=C9F00_RS01675;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1277;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	1701	2126	.	+	.	ID=gene-C9F00_RS01680;Name=C9F00_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01680;old_locus_tag=C9F00_01715
NZ_PYKC01000006.1	Protein Homology	CDS	1701	2126	.	+	0	ID=cds-WP_001805083.1;Parent=gene-C9F00_RS01680;Dbxref=GenBank:WP_001805083.1;Name=WP_001805083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805083.1;locus_tag=C9F00_RS01680;product=hypothetical protein;protein_id=WP_001805083.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	2198	2443	.	-	.	ID=gene-C9F00_RS01685;Name=C9F00_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01685;old_locus_tag=C9F00_01720
NZ_PYKC01000006.1	Protein Homology	CDS	2198	2443	.	-	0	ID=cds-WP_135369777.1;Parent=gene-C9F00_RS01685;Dbxref=GenBank:WP_135369777.1;Name=WP_135369777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9F00_RS01685;product=hypothetical protein;protein_id=WP_135369777.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	pseudogene	2580	2752	.	+	.	ID=gene-C9F00_RS24750;Name=C9F00_RS24750;end_range=2752,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24750;partial=true;pseudo=true;start_range=.,2580
NZ_PYKC01000006.1	Protein Homology	CDS	2580	2752	.	+	0	ID=cds-C9F00_RS24750;Parent=gene-C9F00_RS24750;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9F00_RS24750;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2580;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	2777	3070	.	+	.	ID=gene-C9F00_RS01690;Name=C9F00_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01690
NZ_PYKC01000006.1	GeneMarkS-2+	CDS	2777	3070	.	+	0	ID=cds-WP_125854225.1;Parent=gene-C9F00_RS01690;Dbxref=GenBank:WP_125854225.1;Name=WP_125854225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS01690;product=hypothetical protein;protein_id=WP_125854225.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	3520	3795	.	+	.	ID=gene-C9F00_RS24170;Name=C9F00_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24170;old_locus_tag=C9F00_01730
NZ_PYKC01000006.1	GeneMarkS-2+	CDS	3520	3795	.	+	0	ID=cds-WP_223229629.1;Parent=gene-C9F00_RS24170;Dbxref=GenBank:WP_223229629.1;Name=WP_223229629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F00_RS24170;product=hypothetical protein;protein_id=WP_223229629.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	3888	4355	.	+	.	ID=gene-C9F00_RS01705;Name=C9F00_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01705;old_locus_tag=C9F00_01735
NZ_PYKC01000006.1	Protein Homology	CDS	3888	4355	.	+	0	ID=cds-WP_063809038.1;Parent=gene-C9F00_RS01705;Dbxref=GenBank:WP_063809038.1;Name=WP_063809038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=C9F00_RS01705;product=hypothetical protein;protein_id=WP_063809038.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	pseudogene	4385	4542	.	+	.	ID=gene-C9F00_RS24755;Name=C9F00_RS24755;end_range=4542,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24755;old_locus_tag=C9F00_01740;partial=true;pseudo=true;start_range=.,4385
NZ_PYKC01000006.1	Protein Homology	CDS	4385	4542	.	+	0	ID=cds-C9F00_RS24755;Parent=gene-C9F00_RS24755;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=C9F00_RS24755;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,4385;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	4673	4951	.	+	.	ID=gene-C9F00_RS01715;Name=C9F00_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01715;old_locus_tag=C9F00_01745
NZ_PYKC01000006.1	Protein Homology	CDS	4673	4951	.	+	0	ID=cds-WP_012543321.1;Parent=gene-C9F00_RS01715;Dbxref=GenBank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9F00_RS01715;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	5018	5332	.	-	.	ID=gene-C9F00_RS01720;Name=C9F00_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01720;old_locus_tag=C9F00_01750
NZ_PYKC01000006.1	Protein Homology	CDS	5018	5332	.	-	0	ID=cds-WP_023892102.1;Parent=gene-C9F00_RS01720;Dbxref=GenBank:WP_023892102.1;Name=WP_023892102.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9F00_RS01720;product=SymE family type I addiction module toxin;protein_id=WP_023892102.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	5424	5582	.	+	.	ID=gene-C9F00_RS24685;Name=C9F00_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24685
NZ_PYKC01000006.1	Protein Homology	CDS	5424	5582	.	+	0	ID=cds-WP_217805114.1;Parent=gene-C9F00_RS24685;Dbxref=GenBank:WP_217805114.1;Name=WP_217805114.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9F00_RS24685;product=transposase;protein_id=WP_217805114.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	pseudogene	5516	6086	.	+	.	ID=gene-C9F00_RS24760;Name=C9F00_RS24760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24760;old_locus_tag=C9F00_01755;partial=true;pseudo=true;start_range=.,5516
NZ_PYKC01000006.1	Protein Homology	CDS	5516	6086	.	+	0	ID=cds-C9F00_RS24760;Parent=gene-C9F00_RS24760;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=C9F00_RS24760;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,5516;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	6838	7335	.	+	.	ID=gene-C9F00_RS01730;Name=C9F00_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01730;old_locus_tag=C9F00_01760
NZ_PYKC01000006.1	Protein Homology	CDS	6838	7335	.	+	0	ID=cds-WP_135369206.1;Parent=gene-C9F00_RS01730;Dbxref=GenBank:WP_135369206.1;Name=WP_135369206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9F00_RS01730;product=Saf-pilin pilus formation protein SafA;protein_id=WP_135369206.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	7410	8150	.	+	.	ID=gene-C9F00_RS01735;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9F00_RS01735;old_locus_tag=C9F00_01765
NZ_PYKC01000006.1	Protein Homology	CDS	7410	8150	.	+	0	ID=cds-WP_135369205.1;Parent=gene-C9F00_RS01735;Dbxref=GenBank:WP_135369205.1;Name=WP_135369205.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9F00_RS01735;product=pili assembly chaperone SafB;protein_id=WP_135369205.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	8174	10684	.	+	.	ID=gene-C9F00_RS01740;Name=C9F00_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01740;old_locus_tag=C9F00_01770
NZ_PYKC01000006.1	Protein Homology	CDS	8174	10684	.	+	0	ID=cds-WP_080164206.1;Parent=gene-C9F00_RS01740;Dbxref=GenBank:WP_080164206.1;Name=WP_080164206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9F00_RS01740;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080164206.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	10706	11176	.	+	.	ID=gene-C9F00_RS01745;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9F00_RS01745;old_locus_tag=C9F00_01775
NZ_PYKC01000006.1	Protein Homology	CDS	10706	11176	.	+	0	ID=cds-WP_135369204.1;Parent=gene-C9F00_RS01745;Dbxref=GenBank:WP_135369204.1;Name=WP_135369204.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=C9F00_RS01745;product=AfaD family invasin;protein_id=WP_135369204.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	11583	12404	.	+	.	ID=gene-C9F00_RS01750;Name=C9F00_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01750;old_locus_tag=C9F00_01780
NZ_PYKC01000006.1	Protein Homology	CDS	11583	12404	.	+	0	ID=cds-WP_000119391.1;Parent=gene-C9F00_RS01750;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9F00_RS01750;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	pseudogene	12487	12724	.	+	.	ID=gene-C9F00_RS01755;Name=C9F00_RS01755;end_range=12724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS01755;old_locus_tag=C9F00_01785;partial=true;pseudo=true
NZ_PYKC01000006.1	Protein Homology	CDS	12487	12724	.	+	0	ID=cds-C9F00_RS01755;Parent=gene-C9F00_RS01755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9F00_RS01755;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	13221	14168	.	+	.	ID=gene-C9F00_RS01760;Name=C9F00_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01760;old_locus_tag=C9F00_01790
NZ_PYKC01000006.1	Protein Homology	CDS	13221	14168	.	+	0	ID=cds-WP_000970302.1;Parent=gene-C9F00_RS01760;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9F00_RS01760;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	14288	14503	.	+	.	ID=gene-C9F00_RS01765;Name=C9F00_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01765;old_locus_tag=C9F00_01795
NZ_PYKC01000006.1	Protein Homology	CDS	14288	14503	.	+	0	ID=cds-WP_135369203.1;Parent=gene-C9F00_RS01765;Dbxref=GenBank:WP_135369203.1;Name=WP_135369203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9F00_RS01765;product=hypothetical protein;protein_id=WP_135369203.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	14507	15226	.	-	.	ID=gene-C9F00_RS01770;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9F00_RS01770;old_locus_tag=C9F00_01800
NZ_PYKC01000006.1	Protein Homology	CDS	14507	15226	.	-	0	ID=cds-WP_000787603.1;Parent=gene-C9F00_RS01770;Dbxref=GenBank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9F00_RS01770;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11
NZ_PYKC01000006.1	RefSeq	gene	15572	15979	.	-	.	ID=gene-C9F00_RS01775;Name=C9F00_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS01775;old_locus_tag=C9F00_01805
NZ_PYKC01000006.1	Protein Homology	CDS	15572	15979	.	-	0	ID=cds-WP_000788200.1;Parent=gene-C9F00_RS01775;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9F00_RS01775;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11
##sequence-region NZ_PYKC01000049.1 1 15952
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000049.1	RefSeq	region	1	15952	.	+	.	ID=NZ_PYKC01000049.1:1..15952;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000049.1	RefSeq	gene	1	154	.	+	.	ID=gene-C9F00_RS24395;Name=C9F00_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS24395;old_locus_tag=C9F00_08230;partial=true;start_range=.,1
NZ_PYKC01000049.1	Protein Homology	CDS	1	154	.	+	1	ID=cds-WP_245306383.1;Parent=gene-C9F00_RS24395;Dbxref=GenBank:WP_245306383.1;Name=WP_245306383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F00_RS24395;partial=true;product=hypothetical protein;protein_id=WP_245306383.1;start_range=.,1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	258	1232	.	-	.	ID=gene-C9F00_RS08065;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9F00_RS08065;old_locus_tag=C9F00_08235
NZ_PYKC01000049.1	Protein Homology	CDS	258	1232	.	-	0	ID=cds-WP_000130724.1;Parent=gene-C9F00_RS08065;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9F00_RS08065;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	1745	4684	.	+	.	ID=gene-C9F00_RS08070;Name=C9F00_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08070;old_locus_tag=C9F00_08240
NZ_PYKC01000049.1	Protein Homology	CDS	1745	4684	.	+	0	ID=cds-WP_135369269.1;Parent=gene-C9F00_RS08070;Dbxref=GenBank:WP_135369269.1;Name=WP_135369269.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F00_RS08070;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135369269.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	4770	5393	.	+	.	ID=gene-C9F00_RS08075;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9F00_RS08075;old_locus_tag=C9F00_08245
NZ_PYKC01000049.1	Protein Homology	CDS	4770	5393	.	+	0	ID=cds-WP_000950242.1;Parent=gene-C9F00_RS08075;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9F00_RS08075;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	5438	6595	.	-	.	ID=gene-C9F00_RS08080;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9F00_RS08080;old_locus_tag=C9F00_08250
NZ_PYKC01000049.1	Protein Homology	CDS	5438	6595	.	-	0	ID=cds-WP_000830785.1;Parent=gene-C9F00_RS08080;Dbxref=GenBank:WP_000830785.1;Name=WP_000830785.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9F00_RS08080;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830785.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	6942	8162	.	+	.	ID=gene-C9F00_RS08090;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9F00_RS08090;old_locus_tag=C9F00_08260
NZ_PYKC01000049.1	Protein Homology	CDS	6942	8162	.	+	0	ID=cds-WP_000477023.1;Parent=gene-C9F00_RS08090;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9F00_RS08090;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	8177	9271	.	+	.	ID=gene-C9F00_RS08095;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9F00_RS08095;old_locus_tag=C9F00_08265
NZ_PYKC01000049.1	Protein Homology	CDS	8177	9271	.	+	0	ID=cds-WP_001271421.1;Parent=gene-C9F00_RS08095;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9F00_RS08095;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	9309	9617	.	-	.	ID=gene-C9F00_RS08100;Name=C9F00_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08100;old_locus_tag=C9F00_08270
NZ_PYKC01000049.1	Protein Homology	CDS	9309	9617	.	-	0	ID=cds-WP_000763139.1;Parent=gene-C9F00_RS08100;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9F00_RS08100;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	9885	10100	.	+	.	ID=gene-C9F00_RS08105;Name=C9F00_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08105;old_locus_tag=C9F00_08275
NZ_PYKC01000049.1	Protein Homology	CDS	9885	10100	.	+	0	ID=cds-WP_001239240.1;Parent=gene-C9F00_RS08105;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9F00_RS08105;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	10126	11220	.	-	.	ID=gene-C9F00_RS08110;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9F00_RS08110;old_locus_tag=C9F00_08280
NZ_PYKC01000049.1	Protein Homology	CDS	10126	11220	.	-	0	ID=cds-WP_001096593.1;Parent=gene-C9F00_RS08110;Dbxref=GenBank:WP_001096593.1;Name=WP_001096593.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9F00_RS08110;product=D-alanine--D-alanine ligase;protein_id=WP_001096593.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	11298	12011	.	+	.	ID=gene-C9F00_RS08115;Name=C9F00_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08115;old_locus_tag=C9F00_08285
NZ_PYKC01000049.1	Protein Homology	CDS	11298	12011	.	+	0	ID=cds-WP_000480794.1;Parent=gene-C9F00_RS08115;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9F00_RS08115;product=extensin-like domain-containing protein;protein_id=WP_000480794.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	12180	13391	.	+	.	ID=gene-C9F00_RS08120;Name=C9F00_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08120;old_locus_tag=C9F00_08290
NZ_PYKC01000049.1	Protein Homology	CDS	12180	13391	.	+	0	ID=cds-WP_000446768.1;Parent=gene-C9F00_RS08120;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9F00_RS08120;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	13688	13948	.	+	.	ID=gene-C9F00_RS08125;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9F00_RS08125;old_locus_tag=C9F00_08295
NZ_PYKC01000049.1	Protein Homology	CDS	13688	13948	.	+	0	ID=cds-WP_001518423.1;Parent=gene-C9F00_RS08125;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9F00_RS08125;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	14297	14617	.	+	.	ID=gene-C9F00_RS08130;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9F00_RS08130;old_locus_tag=C9F00_08300
NZ_PYKC01000049.1	Protein Homology	CDS	14297	14617	.	+	0	ID=cds-WP_000705165.1;Parent=gene-C9F00_RS08130;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9F00_RS08130;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	14709	15821	.	+	.	ID=gene-C9F00_RS08135;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9F00_RS08135;old_locus_tag=C9F00_08305
NZ_PYKC01000049.1	Protein Homology	CDS	14709	15821	.	+	0	ID=cds-WP_080085919.1;Parent=gene-C9F00_RS08135;Dbxref=GenBank:WP_080085919.1;Name=WP_080085919.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9F00_RS08135;product=diguanylate cyclase AdrA;protein_id=WP_080085919.1;transl_table=11
NZ_PYKC01000049.1	RefSeq	gene	15836	15952	.	-	.	ID=gene-C9F00_RS08140;Name=C9F00_RS08140;end_range=15952,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS08140;old_locus_tag=C9F00_08310;partial=true
NZ_PYKC01000049.1	Protein Homology	CDS	15836	15952	.	-	0	ID=cds-WP_280954453.1;Parent=gene-C9F00_RS08140;Dbxref=GenBank:WP_280954453.1;Name=WP_280954453.1;end_range=15952,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9F00_RS08140;partial=true;product=pyrroline-5-carboxylate reductase dimerization domain-containing protein;protein_id=WP_280954453.1;transl_table=11
##sequence-region NZ_PYKC01000036.1 1 15823
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000036.1	RefSeq	region	1	15823	.	+	.	ID=NZ_PYKC01000036.1:1..15823;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000036.1	RefSeq	gene	75	182	.	-	.	ID=gene-C9F00_RS05815;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=C9F00_RS05815;old_locus_tag=C9F00_05915
NZ_PYKC01000036.1	Protein Homology	CDS	75	182	.	-	0	ID=cds-WP_000272239.1;Parent=gene-C9F00_RS05815;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9F00_RS05815;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	388	834	.	+	.	ID=gene-C9F00_RS05820;Name=C9F00_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05820;old_locus_tag=C9F00_05920
NZ_PYKC01000036.1	Protein Homology	CDS	388	834	.	+	0	ID=cds-WP_000460698.1;Parent=gene-C9F00_RS05820;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9F00_RS05820;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	814	1608	.	-	.	ID=gene-C9F00_RS05825;Name=C9F00_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05825;old_locus_tag=C9F00_05925
NZ_PYKC01000036.1	Protein Homology	CDS	814	1608	.	-	0	ID=cds-WP_000579793.1;Parent=gene-C9F00_RS05825;Dbxref=GenBank:WP_000579793.1;Name=WP_000579793.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9F00_RS05825;product=AraC family transcriptional regulator;protein_id=WP_000579793.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	1709	2893	.	+	.	ID=gene-C9F00_RS05830;Name=C9F00_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05830;old_locus_tag=C9F00_05930
NZ_PYKC01000036.1	Protein Homology	CDS	1709	2893	.	+	0	ID=cds-WP_000205341.1;Parent=gene-C9F00_RS05830;Dbxref=GenBank:WP_000205341.1;Name=WP_000205341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9F00_RS05830;product=CynX/NimT family MFS transporter;protein_id=WP_000205341.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	3014	3361	.	+	.	ID=gene-C9F00_RS05835;Name=C9F00_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05835;old_locus_tag=C9F00_05935
NZ_PYKC01000036.1	Protein Homology	CDS	3014	3361	.	+	0	ID=cds-WP_001222532.1;Parent=gene-C9F00_RS05835;Dbxref=GenBank:WP_001222532.1;Name=WP_001222532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9F00_RS05835;product=DUF488 domain-containing protein;protein_id=WP_001222532.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	3347	3658	.	-	.	ID=gene-C9F00_RS05840;Name=C9F00_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05840;old_locus_tag=C9F00_05940
NZ_PYKC01000036.1	Protein Homology	CDS	3347	3658	.	-	0	ID=cds-WP_000487126.1;Parent=gene-C9F00_RS05840;Dbxref=GenBank:WP_000487126.1;Name=WP_000487126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9F00_RS05840;product=hypothetical protein;protein_id=WP_000487126.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	3727	3978	.	-	.	ID=gene-C9F00_RS05845;Name=C9F00_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05845;old_locus_tag=C9F00_05945
NZ_PYKC01000036.1	Protein Homology	CDS	3727	3978	.	-	0	ID=cds-WP_000673492.1;Parent=gene-C9F00_RS05845;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9F00_RS05845;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	4174	4272	.	+	.	ID=gene-C9F00_RS05850;Name=C9F00_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05850;old_locus_tag=C9F00_05950
NZ_PYKC01000036.1	Protein Homology	CDS	4174	4272	.	+	0	ID=cds-WP_001589065.1;Parent=gene-C9F00_RS05850;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9F00_RS05850;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	4411	4659	.	-	.	ID=gene-C9F00_RS05855;Name=C9F00_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05855;old_locus_tag=C9F00_05955
NZ_PYKC01000036.1	Protein Homology	CDS	4411	4659	.	-	0	ID=cds-WP_000512149.1;Parent=gene-C9F00_RS05855;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9F00_RS05855;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	4973	5614	.	-	.	ID=gene-C9F00_RS05865;Name=C9F00_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05865;old_locus_tag=C9F00_05965
NZ_PYKC01000036.1	Protein Homology	CDS	4973	5614	.	-	0	ID=cds-WP_001576139.1;Parent=gene-C9F00_RS05865;Dbxref=GenBank:WP_001576139.1;Name=WP_001576139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9F00_RS05865;product=hypothetical protein;protein_id=WP_001576139.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	5844	6026	.	-	.	ID=gene-C9F00_RS05870;Name=C9F00_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05870;old_locus_tag=C9F00_05970
NZ_PYKC01000036.1	Protein Homology	CDS	5844	6026	.	-	0	ID=cds-WP_000513733.1;Parent=gene-C9F00_RS05870;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9F00_RS05870;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	6029	6391	.	-	.	ID=gene-C9F00_RS05875;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9F00_RS05875;old_locus_tag=C9F00_05975
NZ_PYKC01000036.1	Protein Homology	CDS	6029	6391	.	-	0	ID=cds-WP_001248993.1;Parent=gene-C9F00_RS05875;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9F00_RS05875;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	6564	7202	.	-	.	ID=gene-C9F00_RS05880;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9F00_RS05880;old_locus_tag=C9F00_05985
NZ_PYKC01000036.1	Protein Homology	CDS	6564	7202	.	-	0	ID=cds-WP_000457190.1;Parent=gene-C9F00_RS05880;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9F00_RS05880;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	7399	7944	.	-	.	ID=gene-C9F00_RS05885;Name=C9F00_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05885;old_locus_tag=C9F00_05990
NZ_PYKC01000036.1	Protein Homology	CDS	7399	7944	.	-	0	ID=cds-WP_023258191.1;Parent=gene-C9F00_RS05885;Dbxref=GenBank:WP_023258191.1;Name=WP_023258191.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9F00_RS05885;product=chorismate mutase;protein_id=WP_023258191.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	pseudogene	8027	8181	.	+	.	ID=gene-C9F00_RS24350;Name=C9F00_RS24350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS24350;pseudo=true
NZ_PYKC01000036.1	Protein Homology	CDS	8027	8181	.	+	0	ID=cds-C9F00_RS24350;Parent=gene-C9F00_RS24350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9F00_RS24350;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	8260	8508	.	+	.	ID=gene-C9F00_RS05890;Name=C9F00_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05890;old_locus_tag=C9F00_05995
NZ_PYKC01000036.1	Protein Homology	CDS	8260	8508	.	+	0	ID=cds-WP_000208086.1;Parent=gene-C9F00_RS05890;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9F00_RS05890;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	8763	9611	.	-	.	ID=gene-C9F00_RS05895;Name=C9F00_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05895;old_locus_tag=C9F00_06000
NZ_PYKC01000036.1	Protein Homology	CDS	8763	9611	.	-	0	ID=cds-WP_000190263.1;Parent=gene-C9F00_RS05895;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9F00_RS05895;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	9680	10273	.	-	.	ID=gene-C9F00_RS05900;Name=C9F00_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05900;old_locus_tag=C9F00_06005
NZ_PYKC01000036.1	Protein Homology	CDS	9680	10273	.	-	0	ID=cds-WP_001576140.1;Parent=gene-C9F00_RS05900;Dbxref=GenBank:WP_001576140.1;Name=WP_001576140.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9F00_RS05900;product=helix-turn-helix domain-containing protein;protein_id=WP_001576140.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	10418	11206	.	-	.	ID=gene-C9F00_RS05905;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9F00_RS05905;old_locus_tag=C9F00_06010
NZ_PYKC01000036.1	Protein Homology	CDS	10418	11206	.	-	0	ID=cds-WP_135369593.1;Parent=gene-C9F00_RS05905;Dbxref=GenBank:WP_135369593.1;Name=WP_135369593.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9F00_RS05905;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_135369593.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	11315	11962	.	-	.	ID=gene-C9F00_RS05910;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9F00_RS05910;old_locus_tag=C9F00_06015
NZ_PYKC01000036.1	Protein Homology	CDS	11315	11962	.	-	0	ID=cds-WP_001574476.1;Parent=gene-C9F00_RS05910;Dbxref=GenBank:WP_001574476.1;Name=WP_001574476.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9F00_RS05910;product=metal-binding protein ZinT;protein_id=WP_001574476.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	12074	12150	.	-	.	ID=gene-C9F00_RS05915;Name=C9F00_RS05915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS05915;old_locus_tag=C9F00_06020
NZ_PYKC01000036.1	tRNAscan-SE	tRNA	12074	12150	.	-	.	ID=rna-C9F00_RS05915;Parent=gene-C9F00_RS05915;anticodon=(pos:complement(12114..12116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS05915;product=tRNA-Arg
NZ_PYKC01000036.1	tRNAscan-SE	exon	12074	12150	.	-	.	ID=exon-C9F00_RS05915-1;Parent=rna-C9F00_RS05915;anticodon=(pos:complement(12114..12116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS05915;product=tRNA-Arg
NZ_PYKC01000036.1	RefSeq	gene	12159	12485	.	-	.	ID=gene-C9F00_RS05920;Name=C9F00_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05920;old_locus_tag=C9F00_06025
NZ_PYKC01000036.1	Protein Homology	CDS	12159	12485	.	-	0	ID=cds-WP_001183699.1;Parent=gene-C9F00_RS05920;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9F00_RS05920;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	12679	13812	.	+	.	ID=gene-C9F00_RS05925;Name=C9F00_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05925;old_locus_tag=C9F00_06030
NZ_PYKC01000036.1	Protein Homology	CDS	12679	13812	.	+	0	ID=cds-WP_050068351.1;Parent=gene-C9F00_RS05925;Dbxref=GenBank:WP_050068351.1;Name=WP_050068351.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9F00_RS05925;product=mechanosensitive ion channel family protein;protein_id=WP_050068351.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	13894	14484	.	-	.	ID=gene-C9F00_RS05930;Name=C9F00_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05930;old_locus_tag=C9F00_06035
NZ_PYKC01000036.1	Protein Homology	CDS	13894	14484	.	-	0	ID=cds-WP_050068350.1;Parent=gene-C9F00_RS05930;Dbxref=GenBank:WP_050068350.1;Name=WP_050068350.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9F00_RS05930;product=ATP-binding cassette domain-containing protein;protein_id=WP_050068350.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	14478	15275	.	-	.	ID=gene-C9F00_RS05935;Name=C9F00_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05935;old_locus_tag=C9F00_06040
NZ_PYKC01000036.1	Protein Homology	CDS	14478	15275	.	-	0	ID=cds-WP_135492198.1;Parent=gene-C9F00_RS05935;Dbxref=GenBank:WP_135492198.1;Name=WP_135492198.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9F00_RS05935;product=ATP-binding cassette domain-containing protein;protein_id=WP_135492198.1;transl_table=11
NZ_PYKC01000036.1	RefSeq	gene	15269	15823	.	-	.	ID=gene-C9F00_RS05940;Name=C9F00_RS05940;end_range=15823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS05940;old_locus_tag=C9F00_06045;partial=true
NZ_PYKC01000036.1	Protein Homology	CDS	15269	15823	.	-	0	ID=cds-WP_135492200.1;Parent=gene-C9F00_RS05940;Dbxref=GenBank:WP_135492200.1;Name=WP_135492200.1;Ontology_term=GO:0042626,GO:0140359;end_range=15823,.;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871072.1;locus_tag=C9F00_RS05940;partial=true;product=ABC transporter permease;protein_id=WP_135492200.1;transl_table=11
##sequence-region NZ_PYKC01000138.1 1 85329
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKC01000138.1	RefSeq	region	1	85329	.	+	.	ID=NZ_PYKC01000138.1:1..85329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=34ev;sub-species=enterica
NZ_PYKC01000138.1	RefSeq	gene	1	894	.	+	.	ID=gene-C9F00_RS20650;Name=C9F00_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20650;old_locus_tag=C9F00_21130;partial=true;start_range=.,1
NZ_PYKC01000138.1	Protein Homology	CDS	1	894	.	+	0	ID=cds-WP_135492486.1;Parent=gene-C9F00_RS20650;Dbxref=GenBank:WP_135492486.1;Name=WP_135492486.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=C9F00_RS20650;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_135492486.1;start_range=.,1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	1065	3083	.	+	.	ID=gene-C9F00_RS20655;Name=C9F00_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20655;old_locus_tag=C9F00_21135
NZ_PYKC01000138.1	Protein Homology	CDS	1065	3083	.	+	0	ID=cds-WP_135492488.1;Parent=gene-C9F00_RS20655;Dbxref=GenBank:WP_135492488.1;Name=WP_135492488.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F00_RS20655;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_135492488.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	3164	4300	.	-	.	ID=gene-C9F00_RS20660;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9F00_RS20660;old_locus_tag=C9F00_21140
NZ_PYKC01000138.1	Protein Homology	CDS	3164	4300	.	-	0	ID=cds-WP_135492490.1;Parent=gene-C9F00_RS20660;Dbxref=GenBank:WP_135492490.1;Name=WP_135492490.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9F00_RS20660;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_135492490.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	4386	4883	.	+	.	ID=gene-C9F00_RS20665;Name=C9F00_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20665;old_locus_tag=C9F00_21145
NZ_PYKC01000138.1	Protein Homology	CDS	4386	4883	.	+	0	ID=cds-WP_000202966.1;Parent=gene-C9F00_RS20665;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9F00_RS20665;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	5035	5727	.	+	.	ID=gene-C9F00_RS20670;Name=C9F00_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20670;old_locus_tag=C9F00_21150
NZ_PYKC01000138.1	Protein Homology	CDS	5035	5727	.	+	0	ID=cds-WP_000951045.1;Parent=gene-C9F00_RS20670;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9F00_RS20670;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	5816	6814	.	+	.	ID=gene-C9F00_RS20675;Name=C9F00_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20675;old_locus_tag=C9F00_21155
NZ_PYKC01000138.1	Protein Homology	CDS	5816	6814	.	+	0	ID=cds-WP_064047046.1;Parent=gene-C9F00_RS20675;Dbxref=GenBank:WP_064047046.1;Name=WP_064047046.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9F00_RS20675;product=Gfo/Idh/MocA family protein;protein_id=WP_064047046.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	7085	8053	.	+	.	ID=gene-C9F00_RS20680;Name=C9F00_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20680;old_locus_tag=C9F00_21160
NZ_PYKC01000138.1	Protein Homology	CDS	7085	8053	.	+	0	ID=cds-WP_001098837.1;Parent=gene-C9F00_RS20680;Dbxref=GenBank:WP_001098837.1;Name=WP_001098837.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9F00_RS20680;product=TerC family protein;protein_id=WP_001098837.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	8308	9552	.	+	.	ID=gene-C9F00_RS20685;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9F00_RS20685;old_locus_tag=C9F00_21165
NZ_PYKC01000138.1	Protein Homology	CDS	8308	9552	.	+	0	ID=cds-WP_000235363.1;Parent=gene-C9F00_RS20685;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9F00_RS20685;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	10002	10664	.	+	.	ID=gene-C9F00_RS20690;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9F00_RS20690;old_locus_tag=C9F00_21175
NZ_PYKC01000138.1	Protein Homology	CDS	10002	10664	.	+	0	ID=cds-WP_000422143.1;Parent=gene-C9F00_RS20690;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9F00_RS20690;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	10668	11051	.	+	.	ID=gene-C9F00_RS20695;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9F00_RS20695;old_locus_tag=C9F00_21180
NZ_PYKC01000138.1	Protein Homology	CDS	10668	11051	.	+	0	ID=cds-WP_000917516.1;Parent=gene-C9F00_RS20695;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9F00_RS20695;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	11196	11564	.	+	.	ID=gene-C9F00_RS20700;Name=C9F00_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20700;old_locus_tag=C9F00_21185
NZ_PYKC01000138.1	Protein Homology	CDS	11196	11564	.	+	0	ID=cds-WP_000877297.1;Parent=gene-C9F00_RS20700;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9F00_RS20700;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	11606	11911	.	+	.	ID=gene-C9F00_RS20705;Name=C9F00_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20705;old_locus_tag=C9F00_21190
NZ_PYKC01000138.1	Protein Homology	CDS	11606	11911	.	+	0	ID=cds-WP_000031219.1;Parent=gene-C9F00_RS20705;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9F00_RS20705;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	11914	12312	.	+	.	ID=gene-C9F00_RS20710;Name=C9F00_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20710;old_locus_tag=C9F00_21195
NZ_PYKC01000138.1	Protein Homology	CDS	11914	12312	.	+	0	ID=cds-WP_000785623.1;Parent=gene-C9F00_RS20710;Dbxref=GenBank:WP_000785623.1;Name=WP_000785623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9F00_RS20710;product=phage holin family protein;protein_id=WP_000785623.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	12309	12608	.	+	.	ID=gene-C9F00_RS20715;Name=C9F00_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20715;old_locus_tag=C9F00_21200
NZ_PYKC01000138.1	Protein Homology	CDS	12309	12608	.	+	0	ID=cds-WP_000095496.1;Parent=gene-C9F00_RS20715;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9F00_RS20715;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	12846	13238	.	+	.	ID=gene-C9F00_RS20720;Name=C9F00_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20720;old_locus_tag=C9F00_21205
NZ_PYKC01000138.1	Protein Homology	CDS	12846	13238	.	+	0	ID=cds-WP_001592732.1;Parent=gene-C9F00_RS20720;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9F00_RS20720;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	13306	14292	.	+	.	ID=gene-C9F00_RS20725;Name=C9F00_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20725;old_locus_tag=C9F00_21210
NZ_PYKC01000138.1	Protein Homology	CDS	13306	14292	.	+	0	ID=cds-WP_000531163.1;Parent=gene-C9F00_RS20725;Dbxref=GenBank:WP_000531163.1;Name=WP_000531163.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9F00_RS20725;product=glutathione S-transferase family protein;protein_id=WP_000531163.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	14416	14781	.	+	.	ID=gene-C9F00_RS20730;Name=C9F00_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20730;old_locus_tag=C9F00_21215
NZ_PYKC01000138.1	Protein Homology	CDS	14416	14781	.	+	0	ID=cds-WP_000384139.1;Parent=gene-C9F00_RS20730;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9F00_RS20730;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	14820	15716	.	-	.	ID=gene-C9F00_RS20735;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9F00_RS20735;old_locus_tag=C9F00_21220
NZ_PYKC01000138.1	Protein Homology	CDS	14820	15716	.	-	0	ID=cds-WP_001041026.1;Parent=gene-C9F00_RS20735;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9F00_RS20735;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	15821	16522	.	+	.	ID=gene-C9F00_RS20740;Name=C9F00_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20740;old_locus_tag=C9F00_21225
NZ_PYKC01000138.1	Protein Homology	CDS	15821	16522	.	+	0	ID=cds-WP_050067911.1;Parent=gene-C9F00_RS20740;Dbxref=GenBank:WP_050067911.1;Name=WP_050067911.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9F00_RS20740;product=pirin family protein;protein_id=WP_050067911.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	16546	16710	.	+	.	ID=gene-C9F00_RS20745;Name=C9F00_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20745;old_locus_tag=C9F00_21230
NZ_PYKC01000138.1	Protein Homology	CDS	16546	16710	.	+	0	ID=cds-WP_000039326.1;Parent=gene-C9F00_RS20745;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9F00_RS20745;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	16823	18133	.	-	.	ID=gene-C9F00_RS20750;Name=C9F00_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20750;old_locus_tag=C9F00_21235
NZ_PYKC01000138.1	Protein Homology	CDS	16823	18133	.	-	0	ID=cds-WP_000463070.1;Parent=gene-C9F00_RS20750;Dbxref=GenBank:WP_000463070.1;Name=WP_000463070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9F00_RS20750;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463070.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	18159	19490	.	-	.	ID=gene-C9F00_RS20755;Name=C9F00_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20755;old_locus_tag=C9F00_21240
NZ_PYKC01000138.1	Protein Homology	CDS	18159	19490	.	-	0	ID=cds-WP_135369274.1;Parent=gene-C9F00_RS20755;Dbxref=GenBank:WP_135369274.1;Name=WP_135369274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9F00_RS20755;product=amino acid permease;protein_id=WP_135369274.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	19806	21170	.	-	.	ID=gene-C9F00_RS20760;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=C9F00_RS20760;old_locus_tag=C9F00_21245
NZ_PYKC01000138.1	Protein Homology	CDS	19806	21170	.	-	0	ID=cds-WP_135369273.1;Parent=gene-C9F00_RS20760;Dbxref=GenBank:WP_135369273.1;Name=WP_135369273.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9F00_RS20760;product=L-serine ammonia-lyase;protein_id=WP_135369273.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	21240	23534	.	-	.	ID=gene-C9F00_RS20765;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F00_RS20765;old_locus_tag=C9F00_21250
NZ_PYKC01000138.1	Protein Homology	CDS	21240	23534	.	-	0	ID=cds-WP_000867323.1;Parent=gene-C9F00_RS20765;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9F00_RS20765;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	23568	24776	.	-	.	ID=gene-C9F00_RS20770;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=C9F00_RS20770;old_locus_tag=C9F00_21255
NZ_PYKC01000138.1	Protein Homology	CDS	23568	24776	.	-	0	ID=cds-WP_135369272.1;Parent=gene-C9F00_RS20770;Dbxref=GenBank:WP_135369272.1;Name=WP_135369272.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9F00_RS20770;product=propionate kinase;protein_id=WP_135369272.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	24843	26174	.	-	.	ID=gene-C9F00_RS20775;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=C9F00_RS20775;old_locus_tag=C9F00_21260
NZ_PYKC01000138.1	Protein Homology	CDS	24843	26174	.	-	0	ID=cds-WP_000108129.1;Parent=gene-C9F00_RS20775;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9F00_RS20775;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	26195	27184	.	-	.	ID=gene-C9F00_RS20780;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9F00_RS20780;old_locus_tag=C9F00_21265
NZ_PYKC01000138.1	Protein Homology	CDS	26195	27184	.	-	0	ID=cds-WP_000548368.1;Parent=gene-C9F00_RS20780;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9F00_RS20780;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	27282	28220	.	-	.	ID=gene-C9F00_RS20785;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9F00_RS20785;old_locus_tag=C9F00_21270
NZ_PYKC01000138.1	Protein Homology	CDS	27282	28220	.	-	0	ID=cds-WP_001094907.1;Parent=gene-C9F00_RS20785;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9F00_RS20785;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	29167	29541	.	-	.	ID=gene-C9F00_RS20800;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9F00_RS20800;old_locus_tag=C9F00_21285
NZ_PYKC01000138.1	cmsearch	RNase_P_RNA	29167	29541	.	-	.	ID=rna-C9F00_RS20800;Parent=gene-C9F00_RS20800;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS20800;product=RNase P RNA component class A
NZ_PYKC01000138.1	cmsearch	exon	29167	29541	.	-	.	ID=exon-C9F00_RS20800-1;Parent=rna-C9F00_RS20800;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9F00_RS20800;product=RNase P RNA component class A
NZ_PYKC01000138.1	RefSeq	gene	29574	30719	.	-	.	ID=gene-C9F00_RS20805;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9F00_RS20805;old_locus_tag=C9F00_21290
NZ_PYKC01000138.1	Protein Homology	CDS	29574	30719	.	-	0	ID=cds-WP_000706458.1;Parent=gene-C9F00_RS20805;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9F00_RS20805;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	30817	31707	.	-	.	ID=gene-C9F00_RS20810;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F00_RS20810;old_locus_tag=C9F00_21295
NZ_PYKC01000138.1	Protein Homology	CDS	30817	31707	.	-	0	ID=cds-WP_000178106.1;Parent=gene-C9F00_RS20810;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F00_RS20810;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	31733	32503	.	-	.	ID=gene-C9F00_RS20815;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9F00_RS20815;old_locus_tag=C9F00_21300
NZ_PYKC01000138.1	Protein Homology	CDS	31733	32503	.	-	0	ID=cds-WP_001057715.1;Parent=gene-C9F00_RS20815;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9F00_RS20815;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	33033	34604	.	+	.	ID=gene-C9F00_RS20820;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9F00_RS20820;old_locus_tag=C9F00_21305
NZ_PYKC01000138.1	Protein Homology	CDS	33033	34604	.	+	0	ID=cds-WP_135492492.1;Parent=gene-C9F00_RS20820;Dbxref=GenBank:WP_135492492.1;Name=WP_135492492.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9F00_RS20820;product=galactarate dehydratase;protein_id=WP_135492492.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	34844	35791	.	-	.	ID=gene-C9F00_RS20825;Name=C9F00_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20825;old_locus_tag=C9F00_21310
NZ_PYKC01000138.1	Protein Homology	CDS	34844	35791	.	-	0	ID=cds-WP_001027807.1;Parent=gene-C9F00_RS20825;Dbxref=GenBank:WP_001027807.1;Name=WP_001027807.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=C9F00_RS20825;product=sugar kinase;protein_id=WP_001027807.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	35802	36635	.	-	.	ID=gene-C9F00_RS20830;Name=C9F00_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20830;old_locus_tag=C9F00_21315
NZ_PYKC01000138.1	Protein Homology	CDS	35802	36635	.	-	0	ID=cds-WP_001118363.1;Parent=gene-C9F00_RS20830;Dbxref=GenBank:WP_001118363.1;Name=WP_001118363.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=C9F00_RS20830;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118363.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	36969	37823	.	+	.	ID=gene-C9F00_RS20835;Name=C9F00_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20835;old_locus_tag=C9F00_21320
NZ_PYKC01000138.1	Protein Homology	CDS	36969	37823	.	+	0	ID=cds-WP_000469985.1;Parent=gene-C9F00_RS20835;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9F00_RS20835;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	37834	38748	.	+	.	ID=gene-C9F00_RS20840;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9F00_RS20840;old_locus_tag=C9F00_21325
NZ_PYKC01000138.1	Protein Homology	CDS	37834	38748	.	+	0	ID=cds-WP_001748603.1;Parent=gene-C9F00_RS20840;Dbxref=GenBank:WP_001748603.1;Name=WP_001748603.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=C9F00_RS20840;product=1-phosphofructokinase;protein_id=WP_001748603.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	38775	40202	.	+	.	ID=gene-C9F00_RS20845;Name=C9F00_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20845;old_locus_tag=C9F00_21330
NZ_PYKC01000138.1	Protein Homology	CDS	38775	40202	.	+	0	ID=cds-WP_023204541.1;Parent=gene-C9F00_RS20845;Dbxref=GenBank:WP_023204541.1;Name=WP_023204541.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=C9F00_RS20845;product=PTS fructose transporter subunit IIC;protein_id=WP_023204541.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	40189	40995	.	+	.	ID=gene-C9F00_RS20850;Name=C9F00_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20850;old_locus_tag=C9F00_21335
NZ_PYKC01000138.1	Protein Homology	CDS	40189	40995	.	+	0	ID=cds-WP_001175241.1;Parent=gene-C9F00_RS20850;Dbxref=GenBank:WP_001175241.1;Name=WP_001175241.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=C9F00_RS20850;product=HPr family phosphocarrier protein;protein_id=WP_001175241.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	41193	42464	.	+	.	ID=gene-C9F00_RS20855;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=C9F00_RS20855;old_locus_tag=C9F00_21340
NZ_PYKC01000138.1	Protein Homology	CDS	41193	42464	.	+	0	ID=cds-WP_000658627.1;Parent=gene-C9F00_RS20855;Dbxref=GenBank:WP_000658627.1;Name=WP_000658627.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9F00_RS20855;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658627.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	42479	42943	.	+	.	ID=gene-C9F00_RS20860;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9F00_RS20860;old_locus_tag=C9F00_21345
NZ_PYKC01000138.1	Protein Homology	CDS	42479	42943	.	+	0	ID=cds-WP_000080445.1;Parent=gene-C9F00_RS20860;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9F00_RS20860;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	42974	43258	.	+	.	ID=gene-C9F00_RS20865;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9F00_RS20865;old_locus_tag=C9F00_21350
NZ_PYKC01000138.1	Protein Homology	CDS	42974	43258	.	+	0	ID=cds-WP_000824292.1;Parent=gene-C9F00_RS20865;Dbxref=GenBank:WP_000824292.1;Name=WP_000824292.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9F00_RS20865;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824292.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	43262	44635	.	+	.	ID=gene-C9F00_RS20870;Name=C9F00_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20870;old_locus_tag=C9F00_21355
NZ_PYKC01000138.1	Protein Homology	CDS	43262	44635	.	+	0	ID=cds-WP_000490601.1;Parent=gene-C9F00_RS20870;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9F00_RS20870;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	44679	45722	.	+	.	ID=gene-C9F00_RS20875;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=C9F00_RS20875;old_locus_tag=C9F00_21360
NZ_PYKC01000138.1	Protein Homology	CDS	44679	45722	.	+	0	ID=cds-WP_000844173.1;Parent=gene-C9F00_RS20875;Dbxref=GenBank:WP_000844173.1;Name=WP_000844173.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9F00_RS20875;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844173.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	45833	46606	.	+	.	ID=gene-C9F00_RS20880;Name=C9F00_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20880;old_locus_tag=C9F00_21365
NZ_PYKC01000138.1	Protein Homology	CDS	45833	46606	.	+	0	ID=cds-WP_001083896.1;Parent=gene-C9F00_RS20880;Dbxref=GenBank:WP_001083896.1;Name=WP_001083896.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9F00_RS20880;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083896.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	46763	47626	.	-	.	ID=gene-C9F00_RS20885;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9F00_RS20885;old_locus_tag=C9F00_21370
NZ_PYKC01000138.1	Protein Homology	CDS	46763	47626	.	-	0	ID=cds-WP_135369568.1;Parent=gene-C9F00_RS20885;Dbxref=GenBank:WP_135369568.1;Name=WP_135369568.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9F00_RS20885;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_135369568.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	47690	49732	.	+	.	ID=gene-C9F00_RS20890;Name=C9F00_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20890;old_locus_tag=C9F00_21375
NZ_PYKC01000138.1	Protein Homology	CDS	47690	49732	.	+	0	ID=cds-WP_135492494.1;Parent=gene-C9F00_RS20890;Dbxref=GenBank:WP_135492494.1;Name=WP_135492494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F00_RS20890;product=penicillin-binding protein activator;protein_id=WP_135492494.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	49690	50085	.	+	.	ID=gene-C9F00_RS20895;Name=C9F00_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20895;old_locus_tag=C9F00_21380
NZ_PYKC01000138.1	Protein Homology	CDS	49690	50085	.	+	0	ID=cds-WP_000057285.1;Parent=gene-C9F00_RS20895;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9F00_RS20895;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	50107	50697	.	+	.	ID=gene-C9F00_RS20900;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9F00_RS20900;old_locus_tag=C9F00_21385
NZ_PYKC01000138.1	Protein Homology	CDS	50107	50697	.	+	0	ID=cds-WP_000893481.1;Parent=gene-C9F00_RS20900;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9F00_RS20900;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	50707	51282	.	+	.	ID=gene-C9F00_RS20905;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9F00_RS20905;old_locus_tag=C9F00_21390
NZ_PYKC01000138.1	Protein Homology	CDS	50707	51282	.	+	0	ID=cds-WP_135492496.1;Parent=gene-C9F00_RS20905;Dbxref=GenBank:WP_135492496.1;Name=WP_135492496.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9F00_RS20905;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_135492496.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	51349	51984	.	-	.	ID=gene-C9F00_RS20910;Name=C9F00_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20910;old_locus_tag=C9F00_21395
NZ_PYKC01000138.1	Protein Homology	CDS	51349	51984	.	-	0	ID=cds-WP_001537613.1;Parent=gene-C9F00_RS20910;Dbxref=GenBank:WP_001537613.1;Name=WP_001537613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9F00_RS20910;product=NAD(P)H-binding protein;protein_id=WP_001537613.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	52115	52633	.	+	.	ID=gene-C9F00_RS20915;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=C9F00_RS20915;old_locus_tag=C9F00_21400
NZ_PYKC01000138.1	Protein Homology	CDS	52115	52633	.	+	0	ID=cds-WP_000037599.1;Parent=gene-C9F00_RS20915;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9F00_RS20915;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	52613	53056	.	-	.	ID=gene-C9F00_RS20920;Name=C9F00_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20920;old_locus_tag=C9F00_21405
NZ_PYKC01000138.1	Protein Homology	CDS	52613	53056	.	-	0	ID=cds-WP_000380404.1;Parent=gene-C9F00_RS20920;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9F00_RS20920;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	53094	53411	.	+	.	ID=gene-C9F00_RS20925;Name=C9F00_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20925;old_locus_tag=C9F00_21410
NZ_PYKC01000138.1	Protein Homology	CDS	53094	53411	.	+	0	ID=cds-WP_000928379.1;Parent=gene-C9F00_RS20925;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9F00_RS20925;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	53398	53901	.	-	.	ID=gene-C9F00_RS20930;Name=C9F00_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20930;old_locus_tag=C9F00_21415
NZ_PYKC01000138.1	Protein Homology	CDS	53398	53901	.	-	0	ID=cds-WP_000908562.1;Parent=gene-C9F00_RS20930;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9F00_RS20930;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	53895	54419	.	-	.	ID=gene-C9F00_RS20935;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=C9F00_RS20935;old_locus_tag=C9F00_21420
NZ_PYKC01000138.1	Protein Homology	CDS	53895	54419	.	-	0	ID=cds-WP_000884721.1;Parent=gene-C9F00_RS20935;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9F00_RS20935;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	54636	55631	.	+	.	ID=gene-C9F00_RS20940;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=C9F00_RS20940;old_locus_tag=C9F00_21425
NZ_PYKC01000138.1	Protein Homology	CDS	54636	55631	.	+	0	ID=cds-WP_000421309.1;Parent=gene-C9F00_RS20940;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9F00_RS20940;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	55640	56518	.	+	.	ID=gene-C9F00_RS20945;Name=C9F00_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20945;old_locus_tag=C9F00_21430
NZ_PYKC01000138.1	Protein Homology	CDS	55640	56518	.	+	0	ID=cds-WP_431194530.1;Parent=gene-C9F00_RS20945;Dbxref=GenBank:WP_431194530.1;Name=WP_431194530.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=C9F00_RS20945;product=U32 family peptidase;protein_id=WP_431194530.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	56696	57703	.	+	.	ID=gene-C9F00_RS20950;Name=C9F00_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20950;old_locus_tag=C9F00_21435
NZ_PYKC01000138.1	Protein Homology	CDS	56696	57703	.	+	0	ID=cds-WP_135369571.1;Parent=gene-C9F00_RS20950;Dbxref=GenBank:WP_135369571.1;Name=WP_135369571.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9F00_RS20950;product=luciferase-like monooxygenase;protein_id=WP_135369571.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	57681	58400	.	-	.	ID=gene-C9F00_RS20955;Name=C9F00_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20955;old_locus_tag=C9F00_21440
NZ_PYKC01000138.1	Protein Homology	CDS	57681	58400	.	-	0	ID=cds-WP_000532745.1;Parent=gene-C9F00_RS20955;Dbxref=GenBank:WP_000532745.1;Name=WP_000532745.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=C9F00_RS20955;product=L%2CD-transpeptidase family protein;protein_id=WP_000532745.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	58559	59089	.	+	.	ID=gene-C9F00_RS20960;Name=C9F00_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS20960;old_locus_tag=C9F00_21445
NZ_PYKC01000138.1	Protein Homology	CDS	58559	59089	.	+	0	ID=cds-WP_001294027.1;Parent=gene-C9F00_RS20960;Dbxref=GenBank:WP_001294027.1;Name=WP_001294027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=C9F00_RS20960;product=hypothetical protein;protein_id=WP_001294027.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	59150	60394	.	-	.	ID=gene-C9F00_RS20965;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9F00_RS20965;old_locus_tag=C9F00_21450
NZ_PYKC01000138.1	Protein Homology	CDS	59150	60394	.	-	0	ID=cds-WP_000224372.1;Parent=gene-C9F00_RS20965;Dbxref=GenBank:WP_000224372.1;Name=WP_000224372.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9F00_RS20965;product=tryptophan permease;protein_id=WP_000224372.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	60548	62437	.	-	.	ID=gene-C9F00_RS20970;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9F00_RS20970;old_locus_tag=C9F00_21455
NZ_PYKC01000138.1	Protein Homology	CDS	60548	62437	.	-	0	ID=cds-WP_000807248.1;Parent=gene-C9F00_RS20970;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9F00_RS20970;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	62430	62510	.	-	.	ID=gene-C9F00_RS20975;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9F00_RS20975
NZ_PYKC01000138.1	Protein Homology	CDS	62430	62510	.	-	0	ID=cds-WP_010723222.1;Parent=gene-C9F00_RS20975;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9F00_RS20975;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	62616	63500	.	-	.	ID=gene-C9F00_RS20980;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9F00_RS20980;old_locus_tag=C9F00_21460
NZ_PYKC01000138.1	Protein Homology	CDS	62616	63500	.	-	0	ID=cds-WP_000802069.1;Parent=gene-C9F00_RS20980;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9F00_RS20980;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	63610	65745	.	-	.	ID=gene-C9F00_RS20985;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9F00_RS20985;old_locus_tag=C9F00_21465
NZ_PYKC01000138.1	Protein Homology	CDS	63610	65745	.	-	0	ID=cds-WP_001670767.1;Parent=gene-C9F00_RS20985;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9F00_RS20985;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	65987	66256	.	-	.	ID=gene-C9F00_RS20990;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9F00_RS20990;old_locus_tag=C9F00_21470
NZ_PYKC01000138.1	Protein Homology	CDS	65987	66256	.	-	0	ID=cds-WP_000059465.1;Parent=gene-C9F00_RS20990;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9F00_RS20990;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	66407	67351	.	-	.	ID=gene-C9F00_RS20995;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9F00_RS20995;old_locus_tag=C9F00_21475
NZ_PYKC01000138.1	Protein Homology	CDS	66407	67351	.	-	0	ID=cds-WP_135369572.1;Parent=gene-C9F00_RS20995;Dbxref=GenBank:WP_135369572.1;Name=WP_135369572.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9F00_RS20995;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_135369572.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	67351	67752	.	-	.	ID=gene-C9F00_RS21000;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9F00_RS21000;old_locus_tag=C9F00_21480
NZ_PYKC01000138.1	Protein Homology	CDS	67351	67752	.	-	0	ID=cds-WP_001040208.1;Parent=gene-C9F00_RS21000;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9F00_RS21000;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	67973	70651	.	-	.	ID=gene-C9F00_RS21005;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9F00_RS21005;old_locus_tag=C9F00_21485
NZ_PYKC01000138.1	Protein Homology	CDS	67973	70651	.	-	0	ID=cds-WP_000133064.1;Parent=gene-C9F00_RS21005;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F00_RS21005;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	70676	72178	.	-	.	ID=gene-C9F00_RS21010;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9F00_RS21010;old_locus_tag=C9F00_21490
NZ_PYKC01000138.1	Protein Homology	CDS	70676	72178	.	-	0	ID=cds-WP_001031038.1;Parent=gene-C9F00_RS21010;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9F00_RS21010;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	72206	72658	.	-	.	ID=gene-C9F00_RS21015;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9F00_RS21015;old_locus_tag=C9F00_21495
NZ_PYKC01000138.1	Protein Homology	CDS	72206	72658	.	-	0	ID=cds-WP_000105461.1;Parent=gene-C9F00_RS21015;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9F00_RS21015;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	72866	72942	.	-	.	ID=gene-C9F00_RS21020;Name=C9F00_RS21020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS21020;old_locus_tag=C9F00_21500
NZ_PYKC01000138.1	tRNAscan-SE	tRNA	72866	72942	.	-	.	ID=rna-C9F00_RS21020;Parent=gene-C9F00_RS21020;anticodon=(pos:complement(72906..72908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21020;product=tRNA-Met
NZ_PYKC01000138.1	tRNAscan-SE	exon	72866	72942	.	-	.	ID=exon-C9F00_RS21020-1;Parent=rna-C9F00_RS21020;anticodon=(pos:complement(72906..72908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21020;product=tRNA-Met
NZ_PYKC01000138.1	RefSeq	gene	73286	74629	.	+	.	ID=gene-C9F00_RS21025;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9F00_RS21025;old_locus_tag=C9F00_21505
NZ_PYKC01000138.1	Protein Homology	CDS	73286	74629	.	+	0	ID=cds-WP_000207648.1;Parent=gene-C9F00_RS21025;Dbxref=GenBank:WP_000207648.1;Name=WP_000207648.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9F00_RS21025;product=argininosuccinate synthase;protein_id=WP_000207648.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	74715	75779	.	-	.	ID=gene-C9F00_RS21030;Name=C9F00_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F00_RS21030;old_locus_tag=C9F00_21510
NZ_PYKC01000138.1	Protein Homology	CDS	74715	75779	.	-	0	ID=cds-WP_000051504.1;Parent=gene-C9F00_RS21030;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=C9F00_RS21030;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	76115	76201	.	-	.	ID=gene-C9F00_RS21035;Name=C9F00_RS21035;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F00_RS21035;old_locus_tag=C9F00_21515
NZ_PYKC01000138.1	tRNAscan-SE	tRNA	76115	76201	.	-	.	ID=rna-C9F00_RS21035;Parent=gene-C9F00_RS21035;anticodon=(pos:complement(76165..76167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21035;product=tRNA-Leu
NZ_PYKC01000138.1	tRNAscan-SE	exon	76115	76201	.	-	.	ID=exon-C9F00_RS21035-1;Parent=rna-C9F00_RS21035;anticodon=(pos:complement(76165..76167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9F00_RS21035;product=tRNA-Leu
NZ_PYKC01000138.1	RefSeq	gene	76215	76547	.	-	.	ID=gene-C9F00_RS21040;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9F00_RS21040;old_locus_tag=C9F00_21520
NZ_PYKC01000138.1	Protein Homology	CDS	76215	76547	.	-	0	ID=cds-WP_000272680.1;Parent=gene-C9F00_RS21040;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9F00_RS21040;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	76770	78107	.	-	.	ID=gene-C9F00_RS21045;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9F00_RS21045;old_locus_tag=C9F00_21525
NZ_PYKC01000138.1	Protein Homology	CDS	76770	78107	.	-	0	ID=cds-WP_000071169.1;Parent=gene-C9F00_RS21045;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9F00_RS21045;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	78100	78948	.	-	.	ID=gene-C9F00_RS21050;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9F00_RS21050;old_locus_tag=C9F00_21530
NZ_PYKC01000138.1	Protein Homology	CDS	78100	78948	.	-	0	ID=cds-WP_000764711.1;Parent=gene-C9F00_RS21050;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9F00_RS21050;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	79053	80987	.	-	.	ID=gene-C9F00_RS21055;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9F00_RS21055;old_locus_tag=C9F00_21535
NZ_PYKC01000138.1	Protein Homology	CDS	79053	80987	.	-	0	ID=cds-WP_001107481.1;Parent=gene-C9F00_RS21055;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F00_RS21055;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	81091	81717	.	-	.	ID=gene-C9F00_RS21060;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9F00_RS21060;old_locus_tag=C9F00_21545
NZ_PYKC01000138.1	Protein Homology	CDS	81091	81717	.	-	0	ID=cds-WP_000145974.1;Parent=gene-C9F00_RS21060;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9F00_RS21060;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	81844	82137	.	+	.	ID=gene-C9F00_RS21065;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9F00_RS21065;old_locus_tag=C9F00_21550
NZ_PYKC01000138.1	Protein Homology	CDS	81844	82137	.	+	0	ID=cds-WP_001592995.1;Parent=gene-C9F00_RS21065;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9F00_RS21065;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	82293	82769	.	-	.	ID=gene-C9F00_RS21070;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9F00_RS21070;old_locus_tag=C9F00_21555
NZ_PYKC01000138.1	Protein Homology	CDS	82293	82769	.	-	0	ID=cds-WP_001148008.1;Parent=gene-C9F00_RS21070;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9F00_RS21070;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	gene	83017	84450	.	+	.	ID=gene-C9F00_RS21075;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9F00_RS21075;old_locus_tag=C9F00_21560
NZ_PYKC01000138.1	Protein Homology	CDS	83017	84450	.	+	0	ID=cds-WP_023195695.1;Parent=gene-C9F00_RS21075;Dbxref=GenBank:WP_023195695.1;Name=WP_023195695.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9F00_RS21075;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_023195695.1;transl_table=11
NZ_PYKC01000138.1	RefSeq	pseudogene	84581	85329	.	-	.	ID=gene-C9F00_RS21080;Name=C9F00_RS21080;end_range=85329,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F00_RS21080;old_locus_tag=C9F00_21565;partial=true;pseudo=true
NZ_PYKC01000138.1	Protein Homology	CDS	84581	85329	.	-	2	ID=cds-C9F00_RS21080;Parent=gene-C9F00_RS21080;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0005525;end_range=85329,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9F00_RS21080;partial=true;product=GTPase;pseudo=true;transl_table=11
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