##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM474485v1
#!genome-build-accession NCBI_Assembly:GCF_004744855.1
#!annotation-date 09/28/2022 04:08:20
#!annotation-source NCBI RefSeq 
##sequence-region NZ_PYKF01000811.1 1 12685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000811.1	RefSeq	region	1	12685	.	+	.	ID=NZ_PYKF01000811.1:1..12685;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000811.1	RefSeq	gene	1	836	.	-	.	ID=gene-C9F04_RS25390;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9F04_RS25390;old_locus_tag=C9F04_26265;partial=true;start_range=.,1
NZ_PYKF01000811.1	Protein Homology	CDS	1	836	.	-	0	ID=cds-WP_102025188.1;Parent=gene-C9F04_RS25390;Dbxref=Genbank:WP_102025188.1;Name=WP_102025188.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9F04_RS25390;partial=true;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_102025188.1;start_range=.,1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	986	1645	.	-	.	ID=gene-C9F04_RS25395;Name=C9F04_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25395;old_locus_tag=C9F04_26270
NZ_PYKF01000811.1	Protein Homology	CDS	986	1645	.	-	0	ID=cds-WP_000364318.1;Parent=gene-C9F04_RS25395;Dbxref=Genbank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9F04_RS25395;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	1694	2506	.	-	.	ID=gene-C9F04_RS25400;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9F04_RS25400;old_locus_tag=C9F04_26275
NZ_PYKF01000811.1	Protein Homology	CDS	1694	2506	.	-	0	ID=cds-WP_146713347.1;Parent=gene-C9F04_RS25400;Dbxref=Genbank:WP_146713347.1;Name=WP_146713347.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=C9F04_RS25400;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_146713347.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	2506	3519	.	-	.	ID=gene-C9F04_RS25405;Name=C9F04_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25405;old_locus_tag=C9F04_26280
NZ_PYKF01000811.1	Protein Homology	CDS	2506	3519	.	-	0	ID=cds-WP_001289138.1;Parent=gene-C9F04_RS25405;Dbxref=Genbank:WP_001289138.1;Name=WP_001289138.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9F04_RS25405;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289138.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	3587	4723	.	-	.	ID=gene-C9F04_RS25410;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9F04_RS25410;old_locus_tag=C9F04_26285
NZ_PYKF01000811.1	Protein Homology	CDS	3587	4723	.	-	0	ID=cds-WP_146713348.1;Parent=gene-C9F04_RS25410;Dbxref=Genbank:WP_146713348.1;Name=WP_146713348.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9F04_RS25410;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_146713348.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	4827	5828	.	+	.	ID=gene-C9F04_RS25415;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9F04_RS25415;old_locus_tag=C9F04_26290
NZ_PYKF01000811.1	Protein Homology	CDS	4827	5828	.	+	0	ID=cds-WP_146713349.1;Parent=gene-C9F04_RS25415;Dbxref=Genbank:WP_146713349.1;Name=WP_146713349.1;Ontology_term=GO:0010468,GO:0031224;gbkey=CDS;gene=flk;go_component=intrinsic component of membrane|0031224||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9F04_RS25415;product=flagella biosynthesis regulator Flk;protein_id=WP_146713349.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	5825	7003	.	-	.	ID=gene-C9F04_RS25420;Name=C9F04_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25420;old_locus_tag=C9F04_26295
NZ_PYKF01000811.1	Protein Homology	CDS	5825	7003	.	-	0	ID=cds-WP_000127720.1;Parent=gene-C9F04_RS25420;Dbxref=Genbank:WP_000127720.1;Name=WP_000127720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9F04_RS25420;product=MFS transporter;protein_id=WP_000127720.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	7182	7556	.	-	.	ID=gene-C9F04_RS25425;Name=C9F04_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25425;old_locus_tag=C9F04_26300
NZ_PYKF01000811.1	Protein Homology	CDS	7182	7556	.	-	0	ID=cds-WP_001051266.1;Parent=gene-C9F04_RS25425;Dbxref=Genbank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9F04_RS25425;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	7729	7977	.	+	.	ID=gene-C9F04_RS25430;Name=C9F04_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25430;old_locus_tag=C9F04_26305
NZ_PYKF01000811.1	Protein Homology	CDS	7729	7977	.	+	0	ID=cds-WP_000433426.1;Parent=gene-C9F04_RS25430;Dbxref=Genbank:WP_000433426.1;Name=WP_000433426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9F04_RS25430;product=transcriptional regulator;protein_id=WP_000433426.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	8146	8514	.	+	.	ID=gene-C9F04_RS25435;Name=C9F04_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25435;old_locus_tag=C9F04_26310
NZ_PYKF01000811.1	Protein Homology	CDS	8146	8514	.	+	0	ID=cds-WP_000118257.1;Parent=gene-C9F04_RS25435;Dbxref=Genbank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9F04_RS25435;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	8514	9032	.	+	.	ID=gene-C9F04_RS25440;Name=C9F04_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25440;old_locus_tag=C9F04_26315
NZ_PYKF01000811.1	Protein Homology	CDS	8514	9032	.	+	0	ID=cds-WP_000847542.1;Parent=gene-C9F04_RS25440;Dbxref=Genbank:WP_000847542.1;Name=WP_000847542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9F04_RS25440;product=YbjP/YqhG family protein;protein_id=WP_000847542.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	9099	9755	.	-	.	ID=gene-C9F04_RS25445;Name=C9F04_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25445;old_locus_tag=C9F04_26320
NZ_PYKF01000811.1	Protein Homology	CDS	9099	9755	.	-	0	ID=cds-WP_001142900.1;Parent=gene-C9F04_RS25445;Dbxref=Genbank:WP_001142900.1;Name=WP_001142900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9F04_RS25445;product=CPBP family intramembrane metalloprotease;protein_id=WP_001142900.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	9853	11067	.	-	.	ID=gene-C9F04_RS25450;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9F04_RS25450;old_locus_tag=C9F04_26325
NZ_PYKF01000811.1	Protein Homology	CDS	9853	11067	.	-	0	ID=cds-WP_000817159.1;Parent=gene-C9F04_RS25450;Dbxref=Genbank:WP_000817159.1;Name=WP_000817159.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9F04_RS25450;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817159.1;transl_table=11
NZ_PYKF01000811.1	RefSeq	gene	11227	12685	.	+	.	ID=gene-C9F04_RS25455;Name=mnmC;end_range=12685,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9F04_RS25455;old_locus_tag=C9F04_26330;partial=true
NZ_PYKF01000811.1	Protein Homology	CDS	11227	12685	.	+	0	ID=cds-WP_186799101.1;Parent=gene-C9F04_RS25455;Dbxref=Genbank:WP_186799101.1;Name=WP_186799101.1;Ontology_term=GO:0008033,GO:0004808,GO:0016645;end_range=12685,.;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=C9F04_RS25455;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_186799101.1;transl_table=11
##sequence-region NZ_PYKF01000438.1 1 12667
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000438.1	RefSeq	region	1	12667	.	+	.	ID=NZ_PYKF01000438.1:1..12667;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000438.1	RefSeq	gene	1	460	.	-	.	ID=gene-C9F04_RS13140;Name=C9F04_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13140;old_locus_tag=C9F04_13570;partial=true;start_range=.,1
NZ_PYKF01000438.1	Protein Homology	CDS	1	460	.	-	0	ID=cds-WP_261771079.1;Parent=gene-C9F04_RS13140;Dbxref=Genbank:WP_261771079.1;Name=WP_261771079.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F04_RS13140;partial=true;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_261771079.1;start_range=.,1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	457	2241	.	-	.	ID=gene-C9F04_RS13145;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9F04_RS13145;old_locus_tag=C9F04_13575
NZ_PYKF01000438.1	Protein Homology	CDS	457	2241	.	-	0	ID=cds-WP_146712736.1;Parent=gene-C9F04_RS13145;Dbxref=Genbank:WP_146712736.1;Name=WP_146712736.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9F04_RS13145;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_146712736.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	2370	3155	.	-	.	ID=gene-C9F04_RS13150;Name=C9F04_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13150;old_locus_tag=C9F04_13580
NZ_PYKF01000438.1	Protein Homology	CDS	2370	3155	.	-	0	ID=cds-WP_146712737.1;Parent=gene-C9F04_RS13150;Dbxref=Genbank:WP_146712737.1;Name=WP_146712737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9F04_RS13150;product=OBAP family protein;protein_id=WP_146712737.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	3298	3627	.	-	.	ID=gene-C9F04_RS13155;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9F04_RS13155;old_locus_tag=C9F04_13585
NZ_PYKF01000438.1	Protein Homology	CDS	3298	3627	.	-	0	ID=cds-WP_001032161.1;Parent=gene-C9F04_RS13155;Dbxref=Genbank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9F04_RS13155;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	3978	4409	.	-	.	ID=gene-C9F04_RS13160;Name=C9F04_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13160;old_locus_tag=C9F04_13590
NZ_PYKF01000438.1	Protein Homology	CDS	3978	4409	.	-	0	ID=cds-WP_135369541.1;Parent=gene-C9F04_RS13160;Dbxref=Genbank:WP_135369541.1;Name=WP_135369541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9F04_RS13160;product=OsmC family protein;protein_id=WP_135369541.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	4921	5136	.	+	.	ID=gene-C9F04_RS13165;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9F04_RS13165;old_locus_tag=C9F04_13595
NZ_PYKF01000438.1	Protein Homology	CDS	4921	5136	.	+	0	ID=cds-WP_000495700.1;Parent=gene-C9F04_RS13165;Dbxref=Genbank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9F04_RS13165;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	5231	5374	.	+	.	ID=gene-C9F04_RS13170;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9F04_RS13170;old_locus_tag=C9F04_13600
NZ_PYKF01000438.1	Protein Homology	CDS	5231	5374	.	+	0	ID=cds-WP_000841559.1;Parent=gene-C9F04_RS13170;Dbxref=Genbank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9F04_RS13170;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	5551	7248	.	+	.	ID=gene-C9F04_RS13175;Name=C9F04_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13175;old_locus_tag=C9F04_13605
NZ_PYKF01000438.1	Protein Homology	CDS	5551	7248	.	+	0	ID=cds-WP_000450511.1;Parent=gene-C9F04_RS13175;Dbxref=Genbank:WP_000450511.1;Name=WP_000450511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F04_RS13175;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	7534	8544	.	+	.	ID=gene-C9F04_RS13180;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9F04_RS13180;old_locus_tag=C9F04_13610
NZ_PYKF01000438.1	Protein Homology	CDS	7534	8544	.	+	0	ID=cds-WP_000642447.1;Parent=gene-C9F04_RS13180;Dbxref=Genbank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9F04_RS13180;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	8635	9291	.	-	.	ID=gene-C9F04_RS13185;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9F04_RS13185;old_locus_tag=C9F04_13615
NZ_PYKF01000438.1	Protein Homology	CDS	8635	9291	.	-	0	ID=cds-WP_000045657.1;Parent=gene-C9F04_RS13185;Dbxref=Genbank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9F04_RS13185;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	gene	9284	10168	.	-	.	ID=gene-C9F04_RS13190;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F04_RS13190;old_locus_tag=C9F04_13620
NZ_PYKF01000438.1	Protein Homology	CDS	9284	10168	.	-	0	ID=cds-WP_000061599.1;Parent=gene-C9F04_RS13190;Dbxref=Genbank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9F04_RS13190;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11
NZ_PYKF01000438.1	RefSeq	pseudogene	10182	12635	.	-	.	ID=gene-C9F04_RS13195;Name=fdnG;end_range=12635,.;gbkey=Gene;gene=fdnG;gene_biotype=pseudogene;locus_tag=C9F04_RS13195;old_locus_tag=C9F04_13625;partial=true;pseudo=true
NZ_PYKF01000438.1	Protein Homology	CDS	10182	12635	.	-	0	ID=cds-C9F04_RS13195;Parent=gene-C9F04_RS13195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015942,GO:0009326;end_range=12635,.;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F04_RS13195;partial=true;product=formate dehydrogenase-N subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000764.1 1 12664
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000764.1	RefSeq	region	1	12664	.	+	.	ID=NZ_PYKF01000764.1:1..12664;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000764.1	RefSeq	pseudogene	1	99	.	+	.	ID=gene-C9F04_RS23740;Name=C9F04_RS23740;end_range=99,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23740;old_locus_tag=C9F04_24535;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000764.1	Protein Homology	CDS	1	99	.	+	0	ID=cds-C9F04_RS23740;Parent=gene-C9F04_RS23740;Note=Involved in the tartrate degradation pathway%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=99,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9F04_RS23740;partial=true;product=L(+)-tartrate dehydratase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	222	1235	.	-	.	ID=gene-C9F04_RS23750;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9F04_RS23750;old_locus_tag=C9F04_24545
NZ_PYKF01000764.1	Protein Homology	CDS	222	1235	.	-	0	ID=cds-WP_146713268.1;Parent=gene-C9F04_RS23750;Dbxref=Genbank:WP_146713268.1;Name=WP_146713268.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9F04_RS23750;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_146713268.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	1463	1678	.	+	.	ID=gene-C9F04_RS23755;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9F04_RS23755;old_locus_tag=C9F04_24550
NZ_PYKF01000764.1	Protein Homology	CDS	1463	1678	.	+	0	ID=cds-WP_001144069.1;Parent=gene-C9F04_RS23755;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9F04_RS23755;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	1914	3659	.	+	.	ID=gene-C9F04_RS23760;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9F04_RS23760;old_locus_tag=C9F04_24555
NZ_PYKF01000764.1	Protein Homology	CDS	1914	3659	.	+	0	ID=cds-WP_000918865.1;Parent=gene-C9F04_RS23760;Dbxref=Genbank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9F04_RS23760;product=DNA primase;protein_id=WP_000918865.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	3674	5656	.	+	.	ID=gene-C9F04_RS23765;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9F04_RS23765;old_locus_tag=C9F04_24560
NZ_PYKF01000764.1	Protein Homology	CDS	3674	5656	.	+	0	ID=cds-WP_261771498.1;Parent=gene-C9F04_RS23765;Dbxref=Genbank:WP_261771498.1;Name=WP_261771498.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9F04_RS23765;product=RNA polymerase sigma factor RpoD;protein_id=WP_261771498.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	5780	6286	.	-	.	ID=gene-C9F04_RS23770;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9F04_RS23770;old_locus_tag=C9F04_24565
NZ_PYKF01000764.1	Protein Homology	CDS	5780	6286	.	-	0	ID=cds-WP_000237776.1;Parent=gene-C9F04_RS23770;Dbxref=Genbank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9F04_RS23770;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	6412	6487	.	+	.	ID=gene-C9F04_RS23775;Name=C9F04_RS23775;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS23775;old_locus_tag=C9F04_24570
NZ_PYKF01000764.1	tRNAscan-SE	tRNA	6412	6487	.	+	.	ID=rna-C9F04_RS23775;Parent=gene-C9F04_RS23775;anticodon=(pos:6445..6447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23775;product=tRNA-Ile
NZ_PYKF01000764.1	tRNAscan-SE	exon	6412	6487	.	+	.	ID=exon-C9F04_RS23775-1;Parent=rna-C9F04_RS23775;anticodon=(pos:6445..6447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23775;product=tRNA-Ile
NZ_PYKF01000764.1	RefSeq	gene	6567	7334	.	-	.	ID=gene-C9F04_RS23780;Name=C9F04_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23780;old_locus_tag=C9F04_24575
NZ_PYKF01000764.1	Protein Homology	CDS	6567	7334	.	-	0	ID=cds-WP_135369405.1;Parent=gene-C9F04_RS23780;Dbxref=Genbank:WP_135369405.1;Name=WP_135369405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9F04_RS23780;product=siderophore-interacting protein;protein_id=WP_135369405.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	7566	8234	.	+	.	ID=gene-C9F04_RS23785;Name=C9F04_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23785;old_locus_tag=C9F04_24580
NZ_PYKF01000764.1	Protein Homology	CDS	7566	8234	.	+	0	ID=cds-WP_135369275.1;Parent=gene-C9F04_RS23785;Dbxref=Genbank:WP_135369275.1;Name=WP_135369275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9F04_RS23785;product=PadR family transcriptional regulator;protein_id=WP_135369275.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	8231	9796	.	-	.	ID=gene-C9F04_RS23790;Name=C9F04_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23790;old_locus_tag=C9F04_24585
NZ_PYKF01000764.1	Protein Homology	CDS	8231	9796	.	-	0	ID=cds-WP_000478471.1;Parent=gene-C9F04_RS23790;Dbxref=Genbank:WP_000478471.1;Name=WP_000478471.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9F04_RS23790;product=methyl-accepting chemotaxis protein;protein_id=WP_000478471.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	10184	11704	.	-	.	ID=gene-C9F04_RS23795;Name=C9F04_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23795;old_locus_tag=C9F04_24590
NZ_PYKF01000764.1	Protein Homology	CDS	10184	11704	.	-	0	ID=cds-WP_000094645.1;Parent=gene-C9F04_RS23795;Dbxref=Genbank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9F04_RS23795;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11
NZ_PYKF01000764.1	RefSeq	gene	12134	12664	.	+	.	ID=gene-C9F04_RS23800;Name=C9F04_RS23800;end_range=12664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23800;old_locus_tag=C9F04_24600;partial=true
NZ_PYKF01000764.1	Protein Homology	CDS	12134	12664	.	+	0	ID=cds-WP_186799089.1;Parent=gene-C9F04_RS23800;Dbxref=Genbank:WP_186799089.1;Name=WP_186799089.1;Ontology_term=GO:0008483,GO:0030170;end_range=12664,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=C9F04_RS23800;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_186799089.1;transl_table=11
##sequence-region NZ_PYKF01000735.1 1 12609
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000735.1	RefSeq	region	1	12609	.	+	.	ID=NZ_PYKF01000735.1:1..12609;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000735.1	RefSeq	pseudogene	1	627	.	+	.	ID=gene-C9F04_RS22790;Name=C9F04_RS22790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22790;old_locus_tag=C9F04_23555;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000735.1	Protein Homology	CDS	1	627	.	+	0	ID=cds-C9F04_RS22790;Parent=gene-C9F04_RS22790;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F04_RS22790;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	951	2294	.	+	.	ID=gene-C9F04_RS22795;Name=C9F04_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22795;old_locus_tag=C9F04_23560
NZ_PYKF01000735.1	Protein Homology	CDS	951	2294	.	+	0	ID=cds-WP_000017952.1;Parent=gene-C9F04_RS22795;Dbxref=Genbank:WP_000017952.1;Name=WP_000017952.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9F04_RS22795;product=anaerobic sulfatase maturase;protein_id=WP_000017952.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	2374	3186	.	-	.	ID=gene-C9F04_RS22800;Name=C9F04_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22800;old_locus_tag=C9F04_23565
NZ_PYKF01000735.1	Protein Homology	CDS	2374	3186	.	-	0	ID=cds-WP_000213959.1;Parent=gene-C9F04_RS22800;Dbxref=Genbank:WP_000213959.1;Name=WP_000213959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9F04_RS22800;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	3445	4206	.	+	.	ID=gene-C9F04_RS22805;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9F04_RS22805;old_locus_tag=C9F04_23570
NZ_PYKF01000735.1	Protein Homology	CDS	3445	4206	.	+	0	ID=cds-WP_000045169.1;Parent=gene-C9F04_RS22805;Dbxref=Genbank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9F04_RS22805;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	4346	5776	.	+	.	ID=gene-C9F04_RS22810;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9F04_RS22810;old_locus_tag=C9F04_23575
NZ_PYKF01000735.1	Protein Homology	CDS	4346	5776	.	+	0	ID=cds-WP_000355562.1;Parent=gene-C9F04_RS22810;Dbxref=Genbank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9F04_RS22810;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	5872	6627	.	+	.	ID=gene-C9F04_RS22815;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9F04_RS22815;old_locus_tag=C9F04_23580
NZ_PYKF01000735.1	Protein Homology	CDS	5872	6627	.	+	0	ID=cds-WP_000229009.1;Parent=gene-C9F04_RS22815;Dbxref=Genbank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9F04_RS22815;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	6637	7242	.	+	.	ID=gene-C9F04_RS22820;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9F04_RS22820;old_locus_tag=C9F04_23585
NZ_PYKF01000735.1	Protein Homology	CDS	6637	7242	.	+	0	ID=cds-WP_064012925.1;Parent=gene-C9F04_RS22820;Dbxref=Genbank:WP_064012925.1;Name=WP_064012925.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9F04_RS22820;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_064012925.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	7239	8879	.	+	.	ID=gene-C9F04_RS22825;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9F04_RS22825;old_locus_tag=C9F04_23590
NZ_PYKF01000735.1	Protein Homology	CDS	7239	8879	.	+	0	ID=cds-WP_000187559.1;Parent=gene-C9F04_RS22825;Dbxref=Genbank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9F04_RS22825;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	9085	9339	.	+	.	ID=gene-C9F04_RS22830;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9F04_RS22830;old_locus_tag=C9F04_23595
NZ_PYKF01000735.1	Protein Homology	CDS	9085	9339	.	+	0	ID=cds-WP_000508972.1;Parent=gene-C9F04_RS22830;Dbxref=Genbank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9F04_RS22830;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	9343	9891	.	+	.	ID=gene-C9F04_RS22835;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9F04_RS22835;old_locus_tag=C9F04_23600
NZ_PYKF01000735.1	Protein Homology	CDS	9343	9891	.	+	0	ID=cds-WP_000459612.1;Parent=gene-C9F04_RS22835;Dbxref=Genbank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9F04_RS22835;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	9894	10673	.	+	.	ID=gene-C9F04_RS22840;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9F04_RS22840;old_locus_tag=C9F04_23605
NZ_PYKF01000735.1	Protein Homology	CDS	9894	10673	.	+	0	ID=cds-WP_000257554.1;Parent=gene-C9F04_RS22840;Dbxref=Genbank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9F04_RS22840;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	10715	11497	.	+	.	ID=gene-C9F04_RS22845;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9F04_RS22845;old_locus_tag=C9F04_23610
NZ_PYKF01000735.1	Protein Homology	CDS	10715	11497	.	+	0	ID=cds-WP_000459653.1;Parent=gene-C9F04_RS22845;Dbxref=Genbank:WP_000459653.1;Name=WP_000459653.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9F04_RS22845;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459653.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	11505	11993	.	-	.	ID=gene-C9F04_RS22850;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9F04_RS22850;old_locus_tag=C9F04_23615
NZ_PYKF01000735.1	Protein Homology	CDS	11505	11993	.	-	0	ID=cds-WP_146713222.1;Parent=gene-C9F04_RS22850;Dbxref=Genbank:WP_146713222.1;Name=WP_146713222.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9F04_RS22850;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_146713222.1;transl_table=11
NZ_PYKF01000735.1	RefSeq	gene	12179	12609	.	+	.	ID=gene-C9F04_RS22855;Name=C9F04_RS22855;end_range=12609,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22855;old_locus_tag=C9F04_23620;partial=true
NZ_PYKF01000735.1	Protein Homology	CDS	12179	12609	.	+	0	ID=cds-WP_186799081.1;Parent=gene-C9F04_RS22855;Dbxref=Genbank:WP_186799081.1;Name=WP_186799081.1;Ontology_term=GO:0016831;end_range=12609,.;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9F04_RS22855;partial=true;product=UbiD family decarboxylase;protein_id=WP_186799081.1;transl_table=11
##sequence-region NZ_PYKF01000660.1 1 12604
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000660.1	RefSeq	region	1	12604	.	+	.	ID=NZ_PYKF01000660.1:1..12604;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000660.1	RefSeq	pseudogene	1	328	.	-	.	ID=gene-C9F04_RS20180;Name=C9F04_RS20180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20180;old_locus_tag=C9F04_20840;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000660.1	Protein Homology	CDS	1	328	.	-	0	ID=cds-C9F04_RS20180;Parent=gene-C9F04_RS20180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F04_RS20180;partial=true;product=xanthine permease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	386	1510	.	-	.	ID=gene-C9F04_RS20185;Name=C9F04_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20185;old_locus_tag=C9F04_20845
NZ_PYKF01000660.1	Protein Homology	CDS	386	1510	.	-	0	ID=cds-WP_001748889.1;Parent=gene-C9F04_RS20185;Dbxref=Genbank:WP_001748889.1;Name=WP_001748889.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9F04_RS20185;product=aryl-sulfate sulfotransferase;protein_id=WP_001748889.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	1660	2667	.	+	.	ID=gene-C9F04_RS20190;Name=C9F04_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20190;old_locus_tag=C9F04_20850
NZ_PYKF01000660.1	Protein Homology	CDS	1660	2667	.	+	0	ID=cds-WP_135369449.1;Parent=gene-C9F04_RS20190;Dbxref=Genbank:WP_135369449.1;Name=WP_135369449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9F04_RS20190;product=substrate-binding domain-containing protein;protein_id=WP_135369449.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	2658	2776	.	-	.	ID=gene-C9F04_RS20195;Name=C9F04_RS20195;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS20195;old_locus_tag=C9F04_20855
NZ_PYKF01000660.1	cmsearch	ncRNA	2658	2776	.	-	.	ID=rna-C9F04_RS20195;Parent=gene-C9F04_RS20195;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20195;product=RtT sRNA
NZ_PYKF01000660.1	cmsearch	exon	2658	2776	.	-	.	ID=exon-C9F04_RS20195-1;Parent=rna-C9F04_RS20195;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20195;product=RtT sRNA
NZ_PYKF01000660.1	RefSeq	gene	2811	2887	.	-	.	ID=gene-C9F04_RS20200;Name=C9F04_RS20200;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS20200;old_locus_tag=C9F04_20860
NZ_PYKF01000660.1	tRNAscan-SE	tRNA	2811	2887	.	-	.	ID=rna-C9F04_RS20200;Parent=gene-C9F04_RS20200;anticodon=(pos:complement(2851..2853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS20200;product=tRNA-Pro
NZ_PYKF01000660.1	tRNAscan-SE	exon	2811	2887	.	-	.	ID=exon-C9F04_RS20200-1;Parent=rna-C9F04_RS20200;anticodon=(pos:complement(2851..2853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS20200;product=tRNA-Pro
NZ_PYKF01000660.1	RefSeq	gene	2978	4669	.	-	.	ID=gene-C9F04_RS20205;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9F04_RS20205;old_locus_tag=C9F04_20865
NZ_PYKF01000660.1	Protein Homology	CDS	2978	4669	.	-	0	ID=cds-WP_135369448.1;Parent=gene-C9F04_RS20205;Dbxref=Genbank:WP_135369448.1;Name=WP_135369448.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9F04_RS20205;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_135369448.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	4900	5604	.	-	.	ID=gene-C9F04_RS20210;Name=C9F04_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20210;old_locus_tag=C9F04_20870
NZ_PYKF01000660.1	Protein Homology	CDS	4900	5604	.	-	0	ID=cds-WP_000637073.1;Parent=gene-C9F04_RS20210;Dbxref=Genbank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9F04_RS20210;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	5761	6342	.	+	.	ID=gene-C9F04_RS20215;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9F04_RS20215;old_locus_tag=C9F04_20875
NZ_PYKF01000660.1	Protein Homology	CDS	5761	6342	.	+	0	ID=cds-WP_001188420.1;Parent=gene-C9F04_RS20215;Dbxref=Genbank:WP_001188420.1;Name=WP_001188420.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9F04_RS20215;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188420.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	6320	6760	.	+	.	ID=gene-C9F04_RS20220;Name=C9F04_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20220;old_locus_tag=C9F04_20880
NZ_PYKF01000660.1	Protein Homology	CDS	6320	6760	.	+	0	ID=cds-WP_000619902.1;Parent=gene-C9F04_RS20220;Dbxref=Genbank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9F04_RS20220;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	6729	9062	.	-	.	ID=gene-C9F04_RS20225;Name=C9F04_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20225;old_locus_tag=C9F04_20885
NZ_PYKF01000660.1	Protein Homology	CDS	6729	9062	.	-	0	ID=cds-WP_146713076.1;Parent=gene-C9F04_RS20225;Dbxref=Genbank:WP_146713076.1;Name=WP_146713076.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9F04_RS20225;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_146713076.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	9215	9877	.	+	.	ID=gene-C9F04_RS20230;Name=C9F04_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20230;old_locus_tag=C9F04_20890
NZ_PYKF01000660.1	Protein Homology	CDS	9215	9877	.	+	0	ID=cds-WP_000747548.1;Parent=gene-C9F04_RS20230;Dbxref=Genbank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9F04_RS20230;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	10096	11070	.	+	.	ID=gene-C9F04_RS20235;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9F04_RS20235;old_locus_tag=C9F04_20895
NZ_PYKF01000660.1	Protein Homology	CDS	10096	11070	.	+	0	ID=cds-WP_135369446.1;Parent=gene-C9F04_RS20235;Dbxref=Genbank:WP_135369446.1;Name=WP_135369446.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9F04_RS20235;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_135369446.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	11120	11830	.	-	.	ID=gene-C9F04_RS20240;Name=C9F04_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20240;old_locus_tag=C9F04_20900
NZ_PYKF01000660.1	Protein Homology	CDS	11120	11830	.	-	0	ID=cds-WP_000190524.1;Parent=gene-C9F04_RS20240;Dbxref=Genbank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9F04_RS20240;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11
NZ_PYKF01000660.1	RefSeq	gene	12269	12559	.	+	.	ID=gene-C9F04_RS20245;Name=C9F04_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20245;old_locus_tag=C9F04_20905
NZ_PYKF01000660.1	Protein Homology	CDS	12269	12559	.	+	0	ID=cds-WP_146713077.1;Parent=gene-C9F04_RS20245;Dbxref=Genbank:WP_146713077.1;Name=WP_146713077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9F04_RS20245;product=HTH-type transcriptional regulator;protein_id=WP_146713077.1;transl_table=11
##sequence-region NZ_PYKF01000707.1 1 12563
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000707.1	RefSeq	region	1	12563	.	+	.	ID=NZ_PYKF01000707.1:1..12563;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000707.1	RefSeq	gene	270	833	.	+	.	ID=gene-C9F04_RS21930;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9F04_RS21930;old_locus_tag=C9F04_22660
NZ_PYKF01000707.1	Protein Homology	CDS	270	833	.	+	0	ID=cds-WP_001046799.1;Parent=gene-C9F04_RS21930;Dbxref=Genbank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9F04_RS21930;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	1226	2380	.	+	.	ID=gene-C9F04_RS21935;Name=C9F04_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21935;old_locus_tag=C9F04_22665
NZ_PYKF01000707.1	Protein Homology	CDS	1226	2380	.	+	0	ID=cds-WP_135369380.1;Parent=gene-C9F04_RS21935;Dbxref=Genbank:WP_135369380.1;Name=WP_135369380.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210139.1;locus_tag=C9F04_RS21935;product=methyl-accepting chemotaxis protein;protein_id=WP_135369380.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	2526	3509	.	+	.	ID=gene-C9F04_RS21940;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9F04_RS21940;old_locus_tag=C9F04_22670
NZ_PYKF01000707.1	Protein Homology	CDS	2526	3509	.	+	0	ID=cds-WP_000387373.1;Parent=gene-C9F04_RS21940;Dbxref=Genbank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9F04_RS21940;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	3785	3967	.	+	.	ID=gene-C9F04_RS27235;Name=C9F04_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27235;old_locus_tag=C9F04_22675
NZ_PYKF01000707.1	Protein Homology	CDS	3785	3967	.	+	0	ID=cds-WP_001750081.1;Parent=gene-C9F04_RS27235;Dbxref=Genbank:WP_001750081.1;Name=WP_001750081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105156.1;locus_tag=C9F04_RS27235;product=hypothetical protein;protein_id=WP_001750081.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	3996	5369	.	+	.	ID=gene-C9F04_RS21950;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9F04_RS21950;old_locus_tag=C9F04_22680
NZ_PYKF01000707.1	Protein Homology	CDS	3996	5369	.	+	0	ID=cds-WP_146713172.1;Parent=gene-C9F04_RS21950;Dbxref=Genbank:WP_146713172.1;Name=WP_146713172.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F04_RS21950;product=ATP-dependent RNA helicase DbpA;protein_id=WP_146713172.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	5413	6348	.	-	.	ID=gene-C9F04_RS21955;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9F04_RS21955;old_locus_tag=C9F04_22685
NZ_PYKF01000707.1	Protein Homology	CDS	5413	6348	.	-	0	ID=cds-WP_135369379.1;Parent=gene-C9F04_RS21955;Dbxref=Genbank:WP_135369379.1;Name=WP_135369379.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9F04_RS21955;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_135369379.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	pseudogene	6454	6606	.	-	.	ID=gene-C9F04_RS21960;Name=C9F04_RS21960;end_range=6606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21960;old_locus_tag=C9F04_22690;partial=true;pseudo=true
NZ_PYKF01000707.1	Protein Homology	CDS	6454	6606	.	-	0	ID=cds-C9F04_RS21960;Parent=gene-C9F04_RS21960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=6606,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9F04_RS21960;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	7035	10457	.	+	.	ID=gene-C9F04_RS21965;Name=C9F04_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21965;old_locus_tag=C9F04_22695
NZ_PYKF01000707.1	Protein Homology	CDS	7035	10457	.	+	0	ID=cds-WP_135420043.1;Parent=gene-C9F04_RS21965;Dbxref=Genbank:WP_135420043.1;Name=WP_135420043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9F04_RS21965;product=DUF4765 family protein;protein_id=WP_135420043.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	10731	11069	.	+	.	ID=gene-C9F04_RS21970;Name=C9F04_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21970;old_locus_tag=C9F04_22700
NZ_PYKF01000707.1	Protein Homology	CDS	10731	11069	.	+	0	ID=cds-WP_000159242.1;Parent=gene-C9F04_RS21970;Dbxref=Genbank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9F04_RS21970;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	gene	11119	11553	.	-	.	ID=gene-C9F04_RS21975;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9F04_RS21975;old_locus_tag=C9F04_22705
NZ_PYKF01000707.1	Protein Homology	CDS	11119	11553	.	-	0	ID=cds-WP_001082296.1;Parent=gene-C9F04_RS21975;Dbxref=Genbank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9F04_RS21975;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11
NZ_PYKF01000707.1	RefSeq	pseudogene	12035	12563	.	-	.	ID=gene-C9F04_RS21980;Name=C9F04_RS21980;end_range=12563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21980;old_locus_tag=C9F04_22715;partial=true;pseudo=true
NZ_PYKF01000707.1	Protein Homology	CDS	12035	12563	.	-	1	ID=cds-C9F04_RS21980;Parent=gene-C9F04_RS21980;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9F04_RS21980;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000296.1 1 12514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000296.1	RefSeq	region	1	12514	.	+	.	ID=NZ_PYKF01000296.1:1..12514;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000296.1	RefSeq	gene	1	116	.	-	.	ID=gene-C9F04_RS08575;Name=C9F04_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08575;old_locus_tag=C9F04_08855;partial=true;start_range=.,1
NZ_PYKF01000296.1	Protein Homology	CDS	1	116	.	-	0	ID=cds-WP_146712506.1;Parent=gene-C9F04_RS08575;Dbxref=Genbank:WP_146712506.1;Name=WP_146712506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228595.1;locus_tag=C9F04_RS08575;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_146712506.1;start_range=.,1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	101	508	.	-	.	ID=gene-C9F04_RS08580;Name=C9F04_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08580;old_locus_tag=C9F04_08860
NZ_PYKF01000296.1	Protein Homology	CDS	101	508	.	-	0	ID=cds-WP_001078536.1;Parent=gene-C9F04_RS08580;Dbxref=Genbank:WP_001078536.1;Name=WP_001078536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9F04_RS08580;product=DUF2509 family protein;protein_id=WP_001078536.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	505	1068	.	-	.	ID=gene-C9F04_RS08585;Name=C9F04_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08585;old_locus_tag=C9F04_08865
NZ_PYKF01000296.1	Protein Homology	CDS	505	1068	.	-	0	ID=cds-WP_000029152.1;Parent=gene-C9F04_RS08585;Dbxref=Genbank:WP_000029152.1;Name=WP_000029152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9F04_RS08585;product=prepilin peptidase-dependent protein;protein_id=WP_000029152.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	1059	1529	.	-	.	ID=gene-C9F04_RS08590;Name=C9F04_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08590;old_locus_tag=C9F04_08870
NZ_PYKF01000296.1	Protein Homology	CDS	1059	1529	.	-	0	ID=cds-WP_135369237.1;Parent=gene-C9F04_RS08590;Dbxref=Genbank:WP_135369237.1;Name=WP_135369237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9F04_RS08590;product=prepilin peptidase-dependent protein;protein_id=WP_135369237.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	pseudogene	1714	2508	.	-	.	ID=gene-C9F04_RS08595;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=pseudogene;locus_tag=C9F04_RS08595;old_locus_tag=C9F04_08880;pseudo=true
NZ_PYKF01000296.1	Protein Homology	CDS	1714	2508	.	-	0	ID=cds-C9F04_RS08595;Parent=gene-C9F04_RS08595;Note=internal stop;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F04_RS08595;product=thymidylate synthase;pseudo=true;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	2515	3390	.	-	.	ID=gene-C9F04_RS08600;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9F04_RS08600;old_locus_tag=C9F04_08885
NZ_PYKF01000296.1	Protein Homology	CDS	2515	3390	.	-	0	ID=cds-WP_000204645.1;Parent=gene-C9F04_RS08600;Dbxref=Genbank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9F04_RS08600;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	3606	5852	.	-	.	ID=gene-C9F04_RS08605;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F04_RS08605;old_locus_tag=C9F04_08890
NZ_PYKF01000296.1	Protein Homology	CDS	3606	5852	.	-	0	ID=cds-WP_146712507.1;Parent=gene-C9F04_RS08605;Dbxref=Genbank:WP_146712507.1;Name=WP_146712507.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9F04_RS08605;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_146712507.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	5865	6395	.	-	.	ID=gene-C9F04_RS08610;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9F04_RS08610;old_locus_tag=C9F04_08895
NZ_PYKF01000296.1	Protein Homology	CDS	5865	6395	.	-	0	ID=cds-WP_000564481.1;Parent=gene-C9F04_RS08610;Dbxref=Genbank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9F04_RS08610;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	pseudogene	7078	7773	.	+	.	ID=gene-C9F04_RS08615;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=pseudogene;locus_tag=C9F04_RS08615;old_locus_tag=C9F04_08900;pseudo=true
NZ_PYKF01000296.1	Protein Homology	CDS	7078	7773	.	+	0	ID=cds-C9F04_RS08615;Parent=gene-C9F04_RS08615;Note=internal stop;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9F04_RS08615;product=DNA mismatch repair endonuclease MutH;pseudo=true;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	7955	8668	.	+	.	ID=gene-C9F04_RS08620;Name=C9F04_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08620;old_locus_tag=C9F04_08905
NZ_PYKF01000296.1	Protein Homology	CDS	7955	8668	.	+	0	ID=cds-WP_146712508.1;Parent=gene-C9F04_RS08620;Dbxref=Genbank:WP_146712508.1;Name=WP_146712508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9F04_RS08620;product=TerC family protein;protein_id=WP_146712508.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	8838	9056	.	+	.	ID=gene-C9F04_RS08625;Name=C9F04_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08625;old_locus_tag=C9F04_08910
NZ_PYKF01000296.1	Protein Homology	CDS	8838	9056	.	+	0	ID=cds-WP_000758662.1;Parent=gene-C9F04_RS08625;Dbxref=Genbank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9F04_RS08625;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	9247	10287	.	+	.	ID=gene-C9F04_RS08630;Name=C9F04_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08630;old_locus_tag=C9F04_08915
NZ_PYKF01000296.1	Protein Homology	CDS	9247	10287	.	+	0	ID=cds-WP_079802339.1;Parent=gene-C9F04_RS08630;Dbxref=Genbank:WP_079802339.1;Name=WP_079802339.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9F04_RS08630;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_079802339.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	gene	10374	11576	.	-	.	ID=gene-C9F04_RS08635;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9F04_RS08635;old_locus_tag=C9F04_08920
NZ_PYKF01000296.1	Protein Homology	CDS	10374	11576	.	-	0	ID=cds-WP_135369236.1;Parent=gene-C9F04_RS08635;Dbxref=Genbank:WP_135369236.1;Name=WP_135369236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9F04_RS08635;product=lysophospholipid transporter LplT;protein_id=WP_135369236.1;transl_table=11
NZ_PYKF01000296.1	RefSeq	pseudogene	11569	12453	.	-	.	ID=gene-C9F04_RS08640;Name=C9F04_RS08640;end_range=12453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08640;old_locus_tag=C9F04_08925;partial=true;pseudo=true
NZ_PYKF01000296.1	Protein Homology	CDS	11569	12453	.	-	0	ID=cds-C9F04_RS08640;Parent=gene-C9F04_RS08640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9F04_RS08640;partial=true;product=AMP-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000548.1 1 12487
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000548.1	RefSeq	region	1	12487	.	+	.	ID=NZ_PYKF01000548.1:1..12487;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000548.1	RefSeq	gene	74	118	.	-	.	ID=gene-C9F04_RS16340;Name=C9F04_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16340;old_locus_tag=C9F04_16840
NZ_PYKF01000548.1	Protein Homology	CDS	74	118	.	-	0	ID=cds-WP_079827815.1;Parent=gene-C9F04_RS16340;Dbxref=Genbank:WP_079827815.1;Name=WP_079827815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025073.2;locus_tag=C9F04_RS16340;product=hypothetical protein;protein_id=WP_079827815.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	pseudogene	528	605	.	+	.	ID=gene-C9F04_RS26805;Name=C9F04_RS26805;end_range=605,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26805;partial=true;pseudo=true
NZ_PYKF01000548.1	Protein Homology	CDS	528	605	.	+	0	ID=cds-C9F04_RS26805;Parent=gene-C9F04_RS26805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9F04_RS26805;partial=true;product=porin family protein;pseudo=true;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	705	1457	.	+	.	ID=gene-C9F04_RS16345;Name=C9F04_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16345;old_locus_tag=C9F04_16845
NZ_PYKF01000548.1	Protein Homology	CDS	705	1457	.	+	0	ID=cds-WP_135369161.1;Parent=gene-C9F04_RS16345;Dbxref=Genbank:WP_135369161.1;Name=WP_135369161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9F04_RS16345;product=non-specific acid phosphatase;protein_id=WP_135369161.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	1589	2437	.	-	.	ID=gene-C9F04_RS16350;Name=C9F04_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16350;old_locus_tag=C9F04_16850
NZ_PYKF01000548.1	Protein Homology	CDS	1589	2437	.	-	0	ID=cds-WP_000175393.1;Parent=gene-C9F04_RS16350;Dbxref=Genbank:WP_000175393.1;Name=WP_000175393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=C9F04_RS16350;product=SdiA-regulated domain-containing protein;protein_id=WP_000175393.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	2463	2624	.	-	.	ID=gene-C9F04_RS26655;Name=C9F04_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26655
NZ_PYKF01000548.1	GeneMarkS-2+	CDS	2463	2624	.	-	0	ID=cds-WP_001816720.1;Parent=gene-C9F04_RS26655;Dbxref=Genbank:WP_001816720.1;Name=WP_001816720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26655;product=hypothetical protein;protein_id=WP_001816720.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	2886	3098	.	-	.	ID=gene-C9F04_RS16355;Name=C9F04_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16355;old_locus_tag=C9F04_16855
NZ_PYKF01000548.1	Protein Homology	CDS	2886	3098	.	-	0	ID=cds-WP_000063793.1;Parent=gene-C9F04_RS16355;Dbxref=Genbank:WP_000063793.1;Name=WP_000063793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063792.1;locus_tag=C9F04_RS16355;product=hypothetical protein;protein_id=WP_000063793.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	3171	3755	.	-	.	ID=gene-C9F04_RS16360;Name=C9F04_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16360;old_locus_tag=C9F04_16860
NZ_PYKF01000548.1	Protein Homology	CDS	3171	3755	.	-	0	ID=cds-WP_024133464.1;Parent=gene-C9F04_RS16360;Dbxref=Genbank:WP_024133464.1;Name=WP_024133464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=C9F04_RS16360;product=hypothetical protein;protein_id=WP_024133464.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	3798	4457	.	-	.	ID=gene-C9F04_RS16365;Name=C9F04_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16365;old_locus_tag=C9F04_16865
NZ_PYKF01000548.1	Protein Homology	CDS	3798	4457	.	-	0	ID=cds-WP_146712886.1;Parent=gene-C9F04_RS16365;Dbxref=Genbank:WP_146712886.1;Name=WP_146712886.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=C9F04_RS16365;product=DsbA family protein;protein_id=WP_146712886.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	4638	5105	.	-	.	ID=gene-C9F04_RS16370;Name=C9F04_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16370;old_locus_tag=C9F04_16870
NZ_PYKF01000548.1	Protein Homology	CDS	4638	5105	.	-	0	ID=cds-WP_023231669.1;Parent=gene-C9F04_RS16370;Dbxref=Genbank:WP_023231669.1;Name=WP_023231669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750458.1;locus_tag=C9F04_RS16370;product=hypothetical protein;protein_id=WP_023231669.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	5805	6242	.	-	.	ID=gene-C9F04_RS16375;Name=C9F04_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16375;old_locus_tag=C9F04_16875
NZ_PYKF01000548.1	Protein Homology	CDS	5805	6242	.	-	0	ID=cds-WP_000191852.1;Parent=gene-C9F04_RS16375;Dbxref=Genbank:WP_000191852.1;Name=WP_000191852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191852.1;locus_tag=C9F04_RS16375;product=hypothetical protein;protein_id=WP_000191852.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	6262	8922	.	-	.	ID=gene-C9F04_RS16380;Name=C9F04_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16380;old_locus_tag=C9F04_16880
NZ_PYKF01000548.1	Protein Homology	CDS	6262	8922	.	-	0	ID=cds-WP_167850425.1;Parent=gene-C9F04_RS16380;Dbxref=Genbank:WP_167850425.1;Name=WP_167850425.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925994.1;locus_tag=C9F04_RS16380;product=fimbria/pilus outer membrane usher protein;protein_id=WP_167850425.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	9061	9891	.	-	.	ID=gene-C9F04_RS16385;Name=C9F04_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16385;old_locus_tag=C9F04_16885
NZ_PYKF01000548.1	Protein Homology	CDS	9061	9891	.	-	0	ID=cds-WP_023231671.1;Parent=gene-C9F04_RS16385;Dbxref=Genbank:WP_023231671.1;Name=WP_023231671.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402199.1;locus_tag=C9F04_RS16385;product=fimbria/pilus periplasmic chaperone;protein_id=WP_023231671.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	10093	10398	.	-	.	ID=gene-C9F04_RS16390;Name=C9F04_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16390;old_locus_tag=C9F04_16890
NZ_PYKF01000548.1	Protein Homology	CDS	10093	10398	.	-	0	ID=cds-WP_000370555.1;Parent=gene-C9F04_RS16390;Dbxref=Genbank:WP_000370555.1;Name=WP_000370555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370555.1;locus_tag=C9F04_RS16390;product=hypothetical protein;protein_id=WP_000370555.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	pseudogene	10931	11074	.	+	.	ID=gene-C9F04_RS16395;Name=C9F04_RS16395;end_range=11074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16395;old_locus_tag=C9F04_16895;partial=true;pseudo=true
NZ_PYKF01000548.1	Protein Homology	CDS	10931	11074	.	+	0	ID=cds-C9F04_RS16395;Parent=gene-C9F04_RS16395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=11074,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=C9F04_RS16395;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYKF01000548.1	RefSeq	pseudogene	11091	11437	.	+	.	ID=gene-C9F04_RS16400;Name=C9F04_RS16400;end_range=11437,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16400;old_locus_tag=C9F04_16900;partial=true;pseudo=true;start_range=.,11091
NZ_PYKF01000548.1	Protein Homology	CDS	11091	11437	.	+	0	ID=cds-C9F04_RS16400;Parent=gene-C9F04_RS16400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=C9F04_RS16400;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,11091;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	11511	11690	.	-	.	ID=gene-C9F04_RS26660;Name=C9F04_RS26660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26660
NZ_PYKF01000548.1	GeneMarkS-2+	CDS	11511	11690	.	-	0	ID=cds-WP_186799044.1;Parent=gene-C9F04_RS26660;Dbxref=Genbank:WP_186799044.1;Name=WP_186799044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26660;product=hypothetical protein;protein_id=WP_186799044.1;transl_table=11
NZ_PYKF01000548.1	RefSeq	pseudogene	11718	11966	.	-	.	ID=gene-C9F04_RS16405;Name=C9F04_RS16405;end_range=11966,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16405;old_locus_tag=C9F04_16905;partial=true;pseudo=true;start_range=.,11718
NZ_PYKF01000548.1	Protein Homology	CDS	11718	11966	.	-	0	ID=cds-C9F04_RS16405;Parent=gene-C9F04_RS16405;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F04_RS16405;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,11718;transl_table=11
NZ_PYKF01000548.1	RefSeq	gene	12181	12487	.	-	.	ID=gene-C9F04_RS16410;Name=C9F04_RS16410;end_range=12487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16410;old_locus_tag=C9F04_16910;partial=true
NZ_PYKF01000548.1	Protein Homology	CDS	12181	12487	.	-	1	ID=cds-WP_146712887.1;Parent=gene-C9F04_RS16410;Dbxref=Genbank:WP_146712887.1;Name=WP_146712887.1;end_range=12487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9F04_RS16410;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_146712887.1;transl_table=11
##sequence-region NZ_PYKF01000278.1 1 12470
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000278.1	RefSeq	region	1	12470	.	+	.	ID=NZ_PYKF01000278.1:1..12470;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000278.1	RefSeq	pseudogene	1	1362	.	-	.	ID=gene-C9F04_RS07725;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=pseudogene;locus_tag=C9F04_RS07725;old_locus_tag=C9F04_07985;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000278.1	Protein Homology	CDS	1	1362	.	-	0	ID=cds-C9F04_RS07725;Parent=gene-C9F04_RS07725;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394965.1;locus_tag=C9F04_RS07725;partial=true;product=CNNM family cation transport protein YoaE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	1835	2803	.	+	.	ID=gene-C9F04_RS07730;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9F04_RS07730;old_locus_tag=C9F04_07995
NZ_PYKF01000278.1	Protein Homology	CDS	1835	2803	.	+	0	ID=cds-WP_000150521.1;Parent=gene-C9F04_RS07730;Dbxref=Genbank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9F04_RS07730;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	2856	3656	.	+	.	ID=gene-C9F04_RS07735;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9F04_RS07735;old_locus_tag=C9F04_08000
NZ_PYKF01000278.1	Protein Homology	CDS	2856	3656	.	+	0	ID=cds-WP_000406920.1;Parent=gene-C9F04_RS07735;Dbxref=Genbank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9F04_RS07735;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	3669	4520	.	+	.	ID=gene-C9F04_RS07740;Name=C9F04_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07740;old_locus_tag=C9F04_08005
NZ_PYKF01000278.1	Protein Homology	CDS	3669	4520	.	+	0	ID=cds-WP_001518647.1;Parent=gene-C9F04_RS07740;Dbxref=Genbank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9F04_RS07740;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	4579	5037	.	+	.	ID=gene-C9F04_RS07745;Name=C9F04_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07745;old_locus_tag=C9F04_08010
NZ_PYKF01000278.1	Protein Homology	CDS	4579	5037	.	+	0	ID=cds-WP_000156280.1;Parent=gene-C9F04_RS07745;Dbxref=Genbank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9F04_RS07745;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11
NZ_PYKF01000278.1	cmsearch	riboswitch	5234	5335	.	+	.	ID=id-NZ_PYKF01000278.1:5234..5335;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000278.1	RefSeq	gene	5447	6013	.	+	.	ID=gene-C9F04_RS07750;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9F04_RS07750;old_locus_tag=C9F04_08020
NZ_PYKF01000278.1	Protein Homology	CDS	5447	6013	.	+	0	ID=cds-WP_001518359.1;Parent=gene-C9F04_RS07750;Dbxref=Genbank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9F04_RS07750;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	6010	6819	.	-	.	ID=gene-C9F04_RS07755;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9F04_RS07755;old_locus_tag=C9F04_08025
NZ_PYKF01000278.1	Protein Homology	CDS	6010	6819	.	-	0	ID=cds-WP_000010923.1;Parent=gene-C9F04_RS07755;Dbxref=Genbank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9F04_RS07755;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	6885	8630	.	-	.	ID=gene-C9F04_RS07760;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9F04_RS07760;old_locus_tag=C9F04_08030
NZ_PYKF01000278.1	Protein Homology	CDS	6885	8630	.	-	0	ID=cds-WP_000730322.1;Parent=gene-C9F04_RS07760;Dbxref=Genbank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005887;gbkey=CDS;gene=ftsI;go_component=integral component of plasma membrane|0005887||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9F04_RS07760;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	8850	9059	.	-	.	ID=gene-C9F04_RS07765;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F04_RS07765;old_locus_tag=C9F04_08035
NZ_PYKF01000278.1	Protein Homology	CDS	8850	9059	.	-	0	ID=cds-WP_001062678.1;Parent=gene-C9F04_RS07765;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9F04_RS07765;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	9046	9216	.	-	.	ID=gene-C9F04_RS07770;Name=C9F04_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07770;old_locus_tag=C9F04_08040
NZ_PYKF01000278.1	Protein Homology	CDS	9046	9216	.	-	0	ID=cds-WP_135369514.1;Parent=gene-C9F04_RS07770;Dbxref=Genbank:WP_135369514.1;Name=WP_135369514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9F04_RS07770;product=YobF family protein;protein_id=WP_135369514.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	9865	10152	.	-	.	ID=gene-C9F04_RS07775;Name=C9F04_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07775;old_locus_tag=C9F04_08045
NZ_PYKF01000278.1	Protein Homology	CDS	9865	10152	.	-	0	ID=cds-WP_001000660.1;Parent=gene-C9F04_RS07775;Dbxref=Genbank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9F04_RS07775;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	10223	10366	.	-	.	ID=gene-C9F04_RS07780;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9F04_RS07780;old_locus_tag=C9F04_08050
NZ_PYKF01000278.1	Protein Homology	CDS	10223	10366	.	-	0	ID=cds-WP_000714547.1;Parent=gene-C9F04_RS07780;Dbxref=Genbank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9F04_RS07780;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	10524	10763	.	+	.	ID=gene-C9F04_RS07785;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9F04_RS07785;old_locus_tag=C9F04_08055
NZ_PYKF01000278.1	Protein Homology	CDS	10524	10763	.	+	0	ID=cds-WP_001236776.1;Parent=gene-C9F04_RS07785;Dbxref=Genbank:WP_001236776.1;Name=WP_001236776.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9F04_RS07785;product=invasion protein YobH;protein_id=WP_001236776.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	10975	11766	.	-	.	ID=gene-C9F04_RS07790;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9F04_RS07790;old_locus_tag=C9F04_08060
NZ_PYKF01000278.1	Protein Homology	CDS	10975	11766	.	-	0	ID=cds-WP_146712485.1;Parent=gene-C9F04_RS07790;Dbxref=Genbank:WP_146712485.1;Name=WP_146712485.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9F04_RS07790;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_146712485.1;transl_table=11
NZ_PYKF01000278.1	RefSeq	gene	11942	12470	.	+	.	ID=gene-C9F04_RS07795;Name=C9F04_RS07795;end_range=12470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07795;old_locus_tag=C9F04_08065;partial=true
NZ_PYKF01000278.1	Protein Homology	CDS	11942	12470	.	+	0	ID=cds-WP_146712486.1;Parent=gene-C9F04_RS07795;Dbxref=Genbank:WP_146712486.1;Name=WP_146712486.1;Ontology_term=GO:0055085,GO:0022857;end_range=12470,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9F04_RS07795;partial=true;product=MFS transporter;protein_id=WP_146712486.1;transl_table=11
##sequence-region NZ_PYKF01000397.1 1 12382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000397.1	RefSeq	region	1	12382	.	+	.	ID=NZ_PYKF01000397.1:1..12382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000397.1	RefSeq	gene	1	800	.	-	.	ID=gene-C9F04_RS11680;Name=C9F04_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11680;old_locus_tag=C9F04_12085;partial=true;start_range=.,1
NZ_PYKF01000397.1	Protein Homology	CDS	1	800	.	-	0	ID=cds-WP_146712662.1;Parent=gene-C9F04_RS11680;Dbxref=Genbank:WP_146712662.1;Name=WP_146712662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9F04_RS11680;partial=true;product=polysaccharide deacetylase family protein;protein_id=WP_146712662.1;start_range=.,1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	1207	1677	.	-	.	ID=gene-C9F04_RS11685;Name=C9F04_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11685;old_locus_tag=C9F04_12090
NZ_PYKF01000397.1	Protein Homology	CDS	1207	1677	.	-	0	ID=cds-WP_146712663.1;Parent=gene-C9F04_RS11685;Dbxref=Genbank:WP_146712663.1;Name=WP_146712663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=C9F04_RS11685;product=pilin structural protein SafD;protein_id=WP_146712663.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	1699	4209	.	-	.	ID=gene-C9F04_RS11690;Name=C9F04_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11690;old_locus_tag=C9F04_12095
NZ_PYKF01000397.1	Protein Homology	CDS	1699	4209	.	-	0	ID=cds-WP_080164206.1;Parent=gene-C9F04_RS11690;Dbxref=Genbank:WP_080164206.1;Name=WP_080164206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9F04_RS11690;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080164206.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	4233	4973	.	-	.	ID=gene-C9F04_RS11695;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9F04_RS11695;old_locus_tag=C9F04_12100
NZ_PYKF01000397.1	Protein Homology	CDS	4233	4973	.	-	0	ID=cds-WP_135369205.1;Parent=gene-C9F04_RS11695;Dbxref=Genbank:WP_135369205.1;Name=WP_135369205.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9F04_RS11695;product=pili assembly chaperone SafB;protein_id=WP_135369205.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	5048	5545	.	-	.	ID=gene-C9F04_RS11700;Name=C9F04_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11700;old_locus_tag=C9F04_12105
NZ_PYKF01000397.1	Protein Homology	CDS	5048	5545	.	-	0	ID=cds-WP_135369206.1;Parent=gene-C9F04_RS11700;Dbxref=Genbank:WP_135369206.1;Name=WP_135369206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9F04_RS11700;product=Saf-pilin pilus formation protein SafA;protein_id=WP_135369206.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	pseudogene	6297	6998	.	-	.	ID=gene-C9F04_RS11705;Name=C9F04_RS11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11705;old_locus_tag=C9F04_12110;pseudo=true
NZ_PYKF01000397.1	Protein Homology	CDS	6297	6998	.	-	0	ID=cds-C9F04_RS11705;Parent=gene-C9F04_RS11705;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=C9F04_RS11705;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	7051	7365	.	+	.	ID=gene-C9F04_RS11710;Name=C9F04_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11710;old_locus_tag=C9F04_12115
NZ_PYKF01000397.1	Protein Homology	CDS	7051	7365	.	+	0	ID=cds-WP_023892102.1;Parent=gene-C9F04_RS11710;Dbxref=Genbank:WP_023892102.1;Name=WP_023892102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9F04_RS11710;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_023892102.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	7432	7710	.	-	.	ID=gene-C9F04_RS11715;Name=C9F04_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11715;old_locus_tag=C9F04_12120
NZ_PYKF01000397.1	Protein Homology	CDS	7432	7710	.	-	0	ID=cds-WP_012543321.1;Parent=gene-C9F04_RS11715;Dbxref=Genbank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9F04_RS11715;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	8028	8495	.	-	.	ID=gene-C9F04_RS11725;Name=C9F04_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11725;old_locus_tag=C9F04_12130
NZ_PYKF01000397.1	Protein Homology	CDS	8028	8495	.	-	0	ID=cds-WP_063809038.1;Parent=gene-C9F04_RS11725;Dbxref=Genbank:WP_063809038.1;Name=WP_063809038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=C9F04_RS11725;product=hypothetical protein;protein_id=WP_063809038.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	8588	8863	.	-	.	ID=gene-C9F04_RS26605;Name=C9F04_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26605;old_locus_tag=C9F04_12135
NZ_PYKF01000397.1	GeneMarkS-2+	CDS	8588	8863	.	-	0	ID=cds-WP_223229629.1;Parent=gene-C9F04_RS26605;Dbxref=Genbank:WP_223229629.1;Name=WP_223229629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26605;product=hypothetical protein;protein_id=WP_223229629.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	9313	9606	.	-	.	ID=gene-C9F04_RS11740;Name=C9F04_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11740
NZ_PYKF01000397.1	GeneMarkS-2+	CDS	9313	9606	.	-	0	ID=cds-WP_125854225.1;Parent=gene-C9F04_RS11740;Dbxref=Genbank:WP_125854225.1;Name=WP_125854225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS11740;product=hypothetical protein;protein_id=WP_125854225.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	9940	10185	.	+	.	ID=gene-C9F04_RS11745;Name=C9F04_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11745;old_locus_tag=C9F04_12145
NZ_PYKF01000397.1	Protein Homology	CDS	9940	10185	.	+	0	ID=cds-WP_135369777.1;Parent=gene-C9F04_RS11745;Dbxref=Genbank:WP_135369777.1;Name=WP_135369777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9F04_RS11745;product=hypothetical protein;protein_id=WP_135369777.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	10257	10682	.	-	.	ID=gene-C9F04_RS11750;Name=C9F04_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11750;old_locus_tag=C9F04_12150
NZ_PYKF01000397.1	Protein Homology	CDS	10257	10682	.	-	0	ID=cds-WP_001805083.1;Parent=gene-C9F04_RS11750;Dbxref=Genbank:WP_001805083.1;Name=WP_001805083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805083.1;locus_tag=C9F04_RS11750;product=hypothetical protein;protein_id=WP_001805083.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	10657	11034	.	-	.	ID=gene-C9F04_RS11755;Name=C9F04_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11755;old_locus_tag=C9F04_12155
NZ_PYKF01000397.1	GeneMarkS-2+	CDS	10657	11034	.	-	0	ID=cds-WP_240776460.1;Parent=gene-C9F04_RS11755;Dbxref=Genbank:WP_240776460.1;Name=WP_240776460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS11755;product=hypothetical protein;protein_id=WP_240776460.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	gene	11250	11861	.	-	.	ID=gene-C9F04_RS11760;Name=C9F04_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11760;old_locus_tag=C9F04_12160
NZ_PYKF01000397.1	GeneMarkS-2+	CDS	11250	11861	.	-	0	ID=cds-WP_135420260.1;Parent=gene-C9F04_RS11760;Dbxref=Genbank:WP_135420260.1;Name=WP_135420260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS11760;product=hypothetical protein;protein_id=WP_135420260.1;transl_table=11
NZ_PYKF01000397.1	RefSeq	pseudogene	11855	12382	.	-	.	ID=gene-C9F04_RS27030;Name=C9F04_RS27030;end_range=12382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27030;partial=true;pseudo=true
NZ_PYKF01000397.1	Protein Homology	CDS	11855	12382	.	-	0	ID=cds-C9F04_RS27030;Parent=gene-C9F04_RS27030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177798.1;locus_tag=C9F04_RS27030;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000727.1 1 27685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000727.1	RefSeq	region	1	27685	.	+	.	ID=NZ_PYKF01000727.1:1..27685;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000727.1	RefSeq	pseudogene	1	550	.	-	.	ID=gene-C9F04_RS22510;Name=C9F04_RS22510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22510;old_locus_tag=C9F04_23265;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000727.1	Protein Homology	CDS	1	550	.	-	0	ID=cds-C9F04_RS22510;Parent=gene-C9F04_RS22510;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9F04_RS22510;partial=true;product=Glu/Leu/Phe/Val dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	945	1034	.	-	.	ID=gene-C9F04_RS22515;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9F04_RS22515;old_locus_tag=C9F04_23270
NZ_PYKF01000727.1	Protein Homology	CDS	945	1034	.	-	0	ID=cds-WP_000270301.1;Parent=gene-C9F04_RS22515;Dbxref=Genbank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9F04_RS22515;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	1047	2183	.	-	.	ID=gene-C9F04_RS22520;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9F04_RS22520;old_locus_tag=C9F04_23275
NZ_PYKF01000727.1	Protein Homology	CDS	1047	2183	.	-	0	ID=cds-WP_146713206.1;Parent=gene-C9F04_RS22520;Dbxref=Genbank:WP_146713206.1;Name=WP_146713206.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9F04_RS22520;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_146713206.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	2195	3739	.	-	.	ID=gene-C9F04_RS22525;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9F04_RS22525;old_locus_tag=C9F04_23280
NZ_PYKF01000727.1	Protein Homology	CDS	2195	3739	.	-	0	ID=cds-WP_146713207.1;Parent=gene-C9F04_RS22525;Dbxref=Genbank:WP_146713207.1;Name=WP_146713207.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9F04_RS22525;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_146713207.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	3814	4662	.	-	.	ID=gene-C9F04_RS22530;Name=C9F04_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22530;old_locus_tag=C9F04_23285
NZ_PYKF01000727.1	Protein Homology	CDS	3814	4662	.	-	0	ID=cds-WP_000063377.1;Parent=gene-C9F04_RS22530;Dbxref=Genbank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9F04_RS22530;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	4659	5063	.	-	.	ID=gene-C9F04_RS22535;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9F04_RS22535;old_locus_tag=C9F04_23290
NZ_PYKF01000727.1	Protein Homology	CDS	4659	5063	.	-	0	ID=cds-WP_001262580.1;Parent=gene-C9F04_RS22535;Dbxref=Genbank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9F04_RS22535;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	5053	5649	.	-	.	ID=gene-C9F04_RS22540;Name=C9F04_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22540;old_locus_tag=C9F04_23295
NZ_PYKF01000727.1	Protein Homology	CDS	5053	5649	.	-	0	ID=cds-WP_146713208.1;Parent=gene-C9F04_RS22540;Dbxref=Genbank:WP_146713208.1;Name=WP_146713208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9F04_RS22540;product=hydrogenase 1 maturation protease;protein_id=WP_146713208.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	5646	6377	.	-	.	ID=gene-C9F04_RS22545;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9F04_RS22545;old_locus_tag=C9F04_23300
NZ_PYKF01000727.1	Protein Homology	CDS	5646	6377	.	-	0	ID=cds-WP_000147036.1;Parent=gene-C9F04_RS22545;Dbxref=Genbank:WP_000147036.1;Name=WP_000147036.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9F04_RS22545;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147036.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	6396	8189	.	-	.	ID=gene-C9F04_RS22550;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9F04_RS22550;old_locus_tag=C9F04_23305
NZ_PYKF01000727.1	Protein Homology	CDS	6396	8189	.	-	0	ID=cds-WP_146713209.1;Parent=gene-C9F04_RS22550;Dbxref=Genbank:WP_146713209.1;Name=WP_146713209.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9F04_RS22550;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_146713209.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	8186	9304	.	-	.	ID=gene-C9F04_RS22555;Name=C9F04_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22555;old_locus_tag=C9F04_23310
NZ_PYKF01000727.1	Protein Homology	CDS	8186	9304	.	-	0	ID=cds-WP_001058312.1;Parent=gene-C9F04_RS22555;Dbxref=Genbank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9F04_RS22555;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	9799	11064	.	+	.	ID=gene-C9F04_RS22560;Name=C9F04_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22560;old_locus_tag=C9F04_23315
NZ_PYKF01000727.1	Protein Homology	CDS	9799	11064	.	+	0	ID=cds-WP_135420034.1;Parent=gene-C9F04_RS22560;Dbxref=Genbank:WP_135420034.1;Name=WP_135420034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9F04_RS22560;product=DUF4427 domain-containing protein;protein_id=WP_135420034.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	11548	12003	.	-	.	ID=gene-C9F04_RS22565;Name=C9F04_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22565;old_locus_tag=C9F04_23325
NZ_PYKF01000727.1	Protein Homology	CDS	11548	12003	.	-	0	ID=cds-WP_000487337.1;Parent=gene-C9F04_RS22565;Dbxref=Genbank:WP_000487337.1;Name=WP_000487337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=C9F04_RS22565;product=hypothetical protein;protein_id=WP_000487337.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	12042	12662	.	-	.	ID=gene-C9F04_RS22570;Name=C9F04_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22570;old_locus_tag=C9F04_23330
NZ_PYKF01000727.1	Protein Homology	CDS	12042	12662	.	-	0	ID=cds-WP_186799079.1;Parent=gene-C9F04_RS22570;Dbxref=Genbank:WP_186799079.1;Name=WP_186799079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=C9F04_RS22570;product=hypothetical protein;protein_id=WP_186799079.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	13419	14510	.	-	.	ID=gene-C9F04_RS22575;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9F04_RS22575;old_locus_tag=C9F04_23335
NZ_PYKF01000727.1	Protein Homology	CDS	13419	14510	.	-	0	ID=cds-WP_146713210.1;Parent=gene-C9F04_RS22575;Dbxref=Genbank:WP_146713210.1;Name=WP_146713210.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9F04_RS22575;product=redox-regulated ATPase YchF;protein_id=WP_146713210.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	14627	15211	.	-	.	ID=gene-C9F04_RS22580;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9F04_RS22580;old_locus_tag=C9F04_23340
NZ_PYKF01000727.1	Protein Homology	CDS	14627	15211	.	-	0	ID=cds-WP_000985595.1;Parent=gene-C9F04_RS22580;Dbxref=Genbank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9F04_RS22580;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	15487	15765	.	+	.	ID=gene-C9F04_RS22585;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9F04_RS22585;old_locus_tag=C9F04_23345
NZ_PYKF01000727.1	Protein Homology	CDS	15487	15765	.	+	0	ID=cds-WP_000823879.1;Parent=gene-C9F04_RS22585;Dbxref=Genbank:WP_000823879.1;Name=WP_000823879.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9F04_RS22585;product=stress-induced protein YchH;protein_id=WP_000823879.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	15810	17495	.	-	.	ID=gene-C9F04_RS22590;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9F04_RS22590;old_locus_tag=C9F04_23350
NZ_PYKF01000727.1	Protein Homology	CDS	15810	17495	.	-	0	ID=cds-WP_001037181.1;Parent=gene-C9F04_RS22590;Dbxref=Genbank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9F04_RS22590;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	17620	18567	.	-	.	ID=gene-C9F04_RS22595;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9F04_RS22595;old_locus_tag=C9F04_23355
NZ_PYKF01000727.1	Protein Homology	CDS	17620	18567	.	-	0	ID=cds-WP_001518537.1;Parent=gene-C9F04_RS22595;Dbxref=Genbank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9F04_RS22595;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	18833	19684	.	-	.	ID=gene-C9F04_RS22600;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9F04_RS22600;old_locus_tag=C9F04_23360
NZ_PYKF01000727.1	Protein Homology	CDS	18833	19684	.	-	0	ID=cds-WP_146713211.1;Parent=gene-C9F04_RS22600;Dbxref=Genbank:WP_146713211.1;Name=WP_146713211.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9F04_RS22600;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_146713211.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	19681	20304	.	-	.	ID=gene-C9F04_RS22605;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9F04_RS22605;old_locus_tag=C9F04_23365
NZ_PYKF01000727.1	Protein Homology	CDS	19681	20304	.	-	0	ID=cds-WP_000174484.1;Parent=gene-C9F04_RS22605;Dbxref=Genbank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9F04_RS22605;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	20618	21874	.	+	.	ID=gene-C9F04_RS22610;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9F04_RS22610;old_locus_tag=C9F04_23370
NZ_PYKF01000727.1	Protein Homology	CDS	20618	21874	.	+	0	ID=cds-WP_000173208.1;Parent=gene-C9F04_RS22610;Dbxref=Genbank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9F04_RS22610;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	21915	22997	.	+	.	ID=gene-C9F04_RS22615;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9F04_RS22615;old_locus_tag=C9F04_23375
NZ_PYKF01000727.1	Protein Homology	CDS	21915	22997	.	+	0	ID=cds-WP_000804703.1;Parent=gene-C9F04_RS22615;Dbxref=Genbank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9F04_RS22615;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	22997	23830	.	+	.	ID=gene-C9F04_RS22620;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9F04_RS22620;old_locus_tag=C9F04_23380
NZ_PYKF01000727.1	Protein Homology	CDS	22997	23830	.	+	0	ID=cds-WP_000347310.1;Parent=gene-C9F04_RS22620;Dbxref=Genbank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9F04_RS22620;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	23827	24216	.	+	.	ID=gene-C9F04_RS22625;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9F04_RS22625;old_locus_tag=C9F04_23385
NZ_PYKF01000727.1	Protein Homology	CDS	23827	24216	.	+	0	ID=cds-WP_135369433.1;Parent=gene-C9F04_RS22625;Dbxref=Genbank:WP_135369433.1;Name=WP_135369433.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9F04_RS22625;product=invasion regulator SirB2;protein_id=WP_135369433.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	24220	25029	.	+	.	ID=gene-C9F04_RS22630;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9F04_RS22630;old_locus_tag=C9F04_23390
NZ_PYKF01000727.1	Protein Homology	CDS	24220	25029	.	+	0	ID=cds-WP_001257065.1;Parent=gene-C9F04_RS22630;Dbxref=Genbank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9F04_RS22630;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	25067	25921	.	+	.	ID=gene-C9F04_RS22635;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9F04_RS22635;old_locus_tag=C9F04_23395
NZ_PYKF01000727.1	Protein Homology	CDS	25067	25921	.	+	0	ID=cds-WP_146713212.1;Parent=gene-C9F04_RS22635;Dbxref=Genbank:WP_146713212.1;Name=WP_146713212.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9F04_RS22635;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_146713212.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	25975	27075	.	-	.	ID=gene-C9F04_RS22640;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9F04_RS22640;old_locus_tag=C9F04_23400
NZ_PYKF01000727.1	Protein Homology	CDS	25975	27075	.	-	0	ID=cds-WP_000148418.1;Parent=gene-C9F04_RS22640;Dbxref=Genbank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9F04_RS22640;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11
NZ_PYKF01000727.1	RefSeq	gene	27342	27572	.	+	.	ID=gene-C9F04_RS22645;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9F04_RS22645;old_locus_tag=C9F04_23405
NZ_PYKF01000727.1	Protein Homology	CDS	27342	27572	.	+	0	ID=cds-WP_001146392.1;Parent=gene-C9F04_RS22645;Dbxref=Genbank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9F04_RS22645;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11
##sequence-region NZ_PYKF01000145.1 1 12270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000145.1	RefSeq	region	1	12270	.	+	.	ID=NZ_PYKF01000145.1:1..12270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000145.1	RefSeq	gene	240	1007	.	-	.	ID=gene-C9F04_RS03030;Name=C9F04_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03030;old_locus_tag=C9F04_03135
NZ_PYKF01000145.1	Protein Homology	CDS	240	1007	.	-	0	ID=cds-WP_000015789.1;Parent=gene-C9F04_RS03030;Dbxref=Genbank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9F04_RS03030;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	1116	3560	.	-	.	ID=gene-C9F04_RS03035;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9F04_RS03035;old_locus_tag=C9F04_03140
NZ_PYKF01000145.1	Protein Homology	CDS	1116	3560	.	-	0	ID=cds-WP_000973041.1;Parent=gene-C9F04_RS03035;Dbxref=Genbank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9F04_RS03035;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	3800	4378	.	+	.	ID=gene-C9F04_RS03040;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9F04_RS03040;old_locus_tag=C9F04_03145
NZ_PYKF01000145.1	Protein Homology	CDS	3800	4378	.	+	0	ID=cds-WP_000284051.1;Parent=gene-C9F04_RS03040;Dbxref=Genbank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9F04_RS03040;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	4591	5358	.	+	.	ID=gene-C9F04_RS03045;Name=C9F04_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03045;old_locus_tag=C9F04_03150
NZ_PYKF01000145.1	Protein Homology	CDS	4591	5358	.	+	0	ID=cds-WP_000333387.1;Parent=gene-C9F04_RS03045;Dbxref=Genbank:WP_000333387.1;Name=WP_000333387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9F04_RS03045;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	5329	6069	.	-	.	ID=gene-C9F04_RS03050;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9F04_RS03050;old_locus_tag=C9F04_03155
NZ_PYKF01000145.1	Protein Homology	CDS	5329	6069	.	-	0	ID=cds-WP_001225658.1;Parent=gene-C9F04_RS03050;Dbxref=Genbank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9F04_RS03050;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	6319	7374	.	+	.	ID=gene-C9F04_RS03055;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9F04_RS03055;old_locus_tag=C9F04_03160
NZ_PYKF01000145.1	Protein Homology	CDS	6319	7374	.	+	0	ID=cds-WP_001226204.1;Parent=gene-C9F04_RS03055;Dbxref=Genbank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9F04_RS03055;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	7593	8732	.	+	.	ID=gene-C9F04_RS03060;Name=C9F04_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03060;old_locus_tag=C9F04_03165
NZ_PYKF01000145.1	Protein Homology	CDS	7593	8732	.	+	0	ID=cds-WP_000528901.1;Parent=gene-C9F04_RS03060;Dbxref=Genbank:WP_000528901.1;Name=WP_000528901.1;Ontology_term=GO:0006415,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9F04_RS03060;product=RNA ligase RtcB family protein;protein_id=WP_000528901.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	8729	9343	.	+	.	ID=gene-C9F04_RS03065;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9F04_RS03065;old_locus_tag=C9F04_03170
NZ_PYKF01000145.1	Protein Homology	CDS	8729	9343	.	+	0	ID=cds-WP_000602086.1;Parent=gene-C9F04_RS03065;Dbxref=Genbank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9F04_RS03065;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	9499	10956	.	-	.	ID=gene-C9F04_RS03070;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9F04_RS03070;old_locus_tag=C9F04_03175
NZ_PYKF01000145.1	Protein Homology	CDS	9499	10956	.	-	0	ID=cds-WP_146712274.1;Parent=gene-C9F04_RS03070;Dbxref=Genbank:WP_146712274.1;Name=WP_146712274.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9F04_RS03070;product=cytosol nonspecific dipeptidase;protein_id=WP_146712274.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	gene	11205	11663	.	+	.	ID=gene-C9F04_RS03075;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9F04_RS03075;old_locus_tag=C9F04_03180
NZ_PYKF01000145.1	Protein Homology	CDS	11205	11663	.	+	0	ID=cds-WP_001292018.1;Parent=gene-C9F04_RS03075;Dbxref=Genbank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9F04_RS03075;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11
NZ_PYKF01000145.1	RefSeq	pseudogene	11752	12207	.	+	.	ID=gene-C9F04_RS03080;Name=C9F04_RS03080;end_range=12207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03080;old_locus_tag=C9F04_03185;partial=true;pseudo=true
NZ_PYKF01000145.1	Protein Homology	CDS	11752	12207	.	+	0	ID=cds-C9F04_RS03080;Parent=gene-C9F04_RS03080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9F04_RS03080;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000700.1 1 12268
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000700.1	RefSeq	region	1	12268	.	+	.	ID=NZ_PYKF01000700.1:1..12268;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000700.1	RefSeq	gene	120	842	.	+	.	ID=gene-C9F04_RS21760;Name=C9F04_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21760;old_locus_tag=C9F04_22490
NZ_PYKF01000700.1	Protein Homology	CDS	120	842	.	+	0	ID=cds-WP_261771450.1;Parent=gene-C9F04_RS21760;Dbxref=Genbank:WP_261771450.1;Name=WP_261771450.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=C9F04_RS21760;product=fimbria/pilus periplasmic chaperone;protein_id=WP_261771450.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	862	1368	.	+	.	ID=gene-C9F04_RS21765;Name=C9F04_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21765;old_locus_tag=C9F04_22495
NZ_PYKF01000700.1	Protein Homology	CDS	862	1368	.	+	0	ID=cds-WP_000178259.1;Parent=gene-C9F04_RS21765;Dbxref=Genbank:WP_000178259.1;Name=WP_000178259.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=C9F04_RS21765;product=fimbrial protein;protein_id=WP_000178259.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	1383	1853	.	+	.	ID=gene-C9F04_RS21770;Name=C9F04_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21770;old_locus_tag=C9F04_22500
NZ_PYKF01000700.1	Protein Homology	CDS	1383	1853	.	+	0	ID=cds-WP_135369244.1;Parent=gene-C9F04_RS21770;Dbxref=Genbank:WP_135369244.1;Name=WP_135369244.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=C9F04_RS21770;product=fimbrial protein;protein_id=WP_135369244.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	1850	2386	.	+	.	ID=gene-C9F04_RS21775;Name=C9F04_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21775;old_locus_tag=C9F04_22505
NZ_PYKF01000700.1	Protein Homology	CDS	1850	2386	.	+	0	ID=cds-WP_020899169.1;Parent=gene-C9F04_RS21775;Dbxref=Genbank:WP_020899169.1;Name=WP_020899169.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=C9F04_RS21775;product=fimbrial protein;protein_id=WP_020899169.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	2415	3500	.	+	.	ID=gene-C9F04_RS21780;Name=C9F04_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21780;old_locus_tag=C9F04_22510
NZ_PYKF01000700.1	Protein Homology	CDS	2415	3500	.	+	0	ID=cds-WP_135369243.1;Parent=gene-C9F04_RS21780;Dbxref=Genbank:WP_135369243.1;Name=WP_135369243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=C9F04_RS21780;product=hypothetical protein;protein_id=WP_135369243.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	3512	4561	.	+	.	ID=gene-C9F04_RS21785;Name=C9F04_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21785;old_locus_tag=C9F04_22515
NZ_PYKF01000700.1	Protein Homology	CDS	3512	4561	.	+	0	ID=cds-WP_240776467.1;Parent=gene-C9F04_RS21785;Dbxref=Genbank:WP_240776467.1;Name=WP_240776467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662924.1;locus_tag=C9F04_RS21785;product=hypothetical protein;protein_id=WP_240776467.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	pseudogene	4681	4800	.	-	.	ID=gene-C9F04_RS21790;Name=C9F04_RS21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21790;old_locus_tag=C9F04_22520;partial=true;pseudo=true;start_range=.,4681
NZ_PYKF01000700.1	Protein Homology	CDS	4681	4800	.	-	0	ID=cds-C9F04_RS21790;Parent=gene-C9F04_RS21790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9F04_RS21790;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,4681;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	4766	5122	.	-	.	ID=gene-C9F04_RS21795;Name=C9F04_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21795;old_locus_tag=C9F04_22525
NZ_PYKF01000700.1	Protein Homology	CDS	4766	5122	.	-	0	ID=cds-WP_077942301.1;Parent=gene-C9F04_RS21795;Dbxref=Genbank:WP_077942301.1;Name=WP_077942301.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9F04_RS21795;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_077942301.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	5207	7441	.	-	.	ID=gene-C9F04_RS21800;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9F04_RS21800;old_locus_tag=C9F04_22530
NZ_PYKF01000700.1	Protein Homology	CDS	5207	7441	.	-	0	ID=cds-WP_146713162.1;Parent=gene-C9F04_RS21800;Dbxref=Genbank:WP_146713162.1;Name=WP_146713162.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9F04_RS21800;product=GTP diphosphokinase;protein_id=WP_146713162.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	7493	8788	.	-	.	ID=gene-C9F04_RS21805;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9F04_RS21805;old_locus_tag=C9F04_22535
NZ_PYKF01000700.1	Protein Homology	CDS	7493	8788	.	-	0	ID=cds-WP_146713163.1;Parent=gene-C9F04_RS21805;Dbxref=Genbank:WP_146713163.1;Name=WP_146713163.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9F04_RS21805;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_146713163.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	8846	11602	.	+	.	ID=gene-C9F04_RS21810;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9F04_RS21810;old_locus_tag=C9F04_22540
NZ_PYKF01000700.1	Protein Homology	CDS	8846	11602	.	+	0	ID=cds-WP_000186397.1;Parent=gene-C9F04_RS21810;Dbxref=Genbank:WP_000186397.1;Name=WP_000186397.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=barA;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9F04_RS21810;product=two-component sensor histidine kinase BarA;protein_id=WP_000186397.1;transl_table=11
NZ_PYKF01000700.1	RefSeq	gene	11646	12268	.	-	.	ID=gene-C9F04_RS21815;Name=C9F04_RS21815;end_range=12268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21815;old_locus_tag=C9F04_22545;partial=true
NZ_PYKF01000700.1	Protein Homology	CDS	11646	12268	.	-	2	ID=cds-WP_146713164.1;Parent=gene-C9F04_RS21815;Dbxref=Genbank:WP_146713164.1;Name=WP_146713164.1;Ontology_term=GO:0031388,GO:0008887;end_range=12268,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9F04_RS21815;partial=true;product=glycerate kinase;protein_id=WP_146713164.1;transl_table=11
##sequence-region NZ_PYKF01000777.1 1 12227
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000777.1	RefSeq	region	1	12227	.	+	.	ID=NZ_PYKF01000777.1:1..12227;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000777.1	RefSeq	gene	1	1052	.	+	.	ID=gene-C9F04_RS24290;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9F04_RS24290;old_locus_tag=C9F04_25110;partial=true;start_range=.,1
NZ_PYKF01000777.1	Protein Homology	CDS	1	1052	.	+	2	ID=cds-WP_261771499.1;Parent=gene-C9F04_RS24290;Dbxref=Genbank:WP_261771499.1;Name=WP_261771499.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9F04_RS24290;partial=true;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_261771499.1;start_range=.,1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	1149	3389	.	-	.	ID=gene-C9F04_RS24295;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9F04_RS24295;old_locus_tag=C9F04_25115
NZ_PYKF01000777.1	Protein Homology	CDS	1149	3389	.	-	0	ID=cds-WP_146713289.1;Parent=gene-C9F04_RS24295;Dbxref=Genbank:WP_146713289.1;Name=WP_146713289.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9F04_RS24295;product=carbamoyltransferase HypF;protein_id=WP_146713289.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	3535	4080	.	-	.	ID=gene-C9F04_RS24300;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9F04_RS24300;old_locus_tag=C9F04_25120
NZ_PYKF01000777.1	Protein Homology	CDS	3535	4080	.	-	0	ID=cds-WP_001078791.1;Parent=gene-C9F04_RS24300;Dbxref=Genbank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9F04_RS24300;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	4281	5090	.	-	.	ID=gene-C9F04_RS24305;Name=C9F04_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24305;old_locus_tag=C9F04_25125
NZ_PYKF01000777.1	Protein Homology	CDS	4281	5090	.	-	0	ID=cds-WP_135369734.1;Parent=gene-C9F04_RS24305;Dbxref=Genbank:WP_135369734.1;Name=WP_135369734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9F04_RS24305;product=hypothetical protein;protein_id=WP_135369734.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	5117	5587	.	-	.	ID=gene-C9F04_RS24310;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9F04_RS24310;old_locus_tag=C9F04_25130
NZ_PYKF01000777.1	Protein Homology	CDS	5117	5587	.	-	0	ID=cds-WP_000132984.1;Parent=gene-C9F04_RS24310;Dbxref=Genbank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9F04_RS24310;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	5580	5990	.	-	.	ID=gene-C9F04_RS24315;Name=C9F04_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24315;old_locus_tag=C9F04_25135
NZ_PYKF01000777.1	Protein Homology	CDS	5580	5990	.	-	0	ID=cds-WP_000003726.1;Parent=gene-C9F04_RS24315;Dbxref=Genbank:WP_000003726.1;Name=WP_000003726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9F04_RS24315;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003726.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	5987	6754	.	-	.	ID=gene-C9F04_RS24320;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9F04_RS24320;old_locus_tag=C9F04_25140
NZ_PYKF01000777.1	Protein Homology	CDS	5987	6754	.	-	0	ID=cds-WP_000067419.1;Parent=gene-C9F04_RS24320;Dbxref=Genbank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9F04_RS24320;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	6754	7296	.	-	.	ID=gene-C9F04_RS24325;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9F04_RS24325;old_locus_tag=C9F04_25145
NZ_PYKF01000777.1	Protein Homology	CDS	6754	7296	.	-	0	ID=cds-WP_000493773.1;Parent=gene-C9F04_RS24325;Dbxref=Genbank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9F04_RS24325;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	7306	9015	.	-	.	ID=gene-C9F04_RS24330;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9F04_RS24330;old_locus_tag=C9F04_25150
NZ_PYKF01000777.1	Protein Homology	CDS	7306	9015	.	-	0	ID=cds-WP_001288155.1;Parent=gene-C9F04_RS24330;Dbxref=Genbank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9F04_RS24330;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	9033	9956	.	-	.	ID=gene-C9F04_RS24335;Name=C9F04_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24335;old_locus_tag=C9F04_25155
NZ_PYKF01000777.1	Protein Homology	CDS	9033	9956	.	-	0	ID=cds-WP_146713290.1;Parent=gene-C9F04_RS24335;Dbxref=Genbank:WP_146713290.1;Name=WP_146713290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9F04_RS24335;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_146713290.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	9959	11785	.	-	.	ID=gene-C9F04_RS24340;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9F04_RS24340;old_locus_tag=C9F04_25160
NZ_PYKF01000777.1	Protein Homology	CDS	9959	11785	.	-	0	ID=cds-WP_021294304.1;Parent=gene-C9F04_RS24340;Dbxref=Genbank:WP_021294304.1;Name=WP_021294304.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9F04_RS24340;product=formate hydrogenlyase subunit 3;protein_id=WP_021294304.1;transl_table=11
NZ_PYKF01000777.1	RefSeq	gene	11785	12227	.	-	.	ID=gene-C9F04_RS24345;Name=C9F04_RS24345;end_range=12227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24345;old_locus_tag=C9F04_25165;partial=true
NZ_PYKF01000777.1	Protein Homology	CDS	11785	12227	.	-	2	ID=cds-WP_146713291.1;Parent=gene-C9F04_RS24345;Dbxref=Genbank:WP_146713291.1;Name=WP_146713291.1;end_range=12227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9F04_RS24345;partial=true;product=4Fe-4S binding protein;protein_id=WP_146713291.1;transl_table=11
##sequence-region NZ_PYKF01000230.1 1 12198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000230.1	RefSeq	region	1	12198	.	+	.	ID=NZ_PYKF01000230.1:1..12198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000230.1	RefSeq	gene	1	1156	.	+	.	ID=gene-C9F04_RS05970;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9F04_RS05970;old_locus_tag=C9F04_06160;partial=true;start_range=.,1
NZ_PYKF01000230.1	Protein Homology	CDS	1	1156	.	+	1	ID=cds-WP_146712408.1;Parent=gene-C9F04_RS05970;Dbxref=Genbank:WP_146712408.1;Name=WP_146712408.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9F04_RS05970;partial=true;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_146712408.1;start_range=.,1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	1242	1943	.	+	.	ID=gene-C9F04_RS05975;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9F04_RS05975;old_locus_tag=C9F04_06165
NZ_PYKF01000230.1	Protein Homology	CDS	1242	1943	.	+	0	ID=cds-WP_000209831.1;Parent=gene-C9F04_RS05975;Dbxref=Genbank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9F04_RS05975;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	2197	4020	.	+	.	ID=gene-C9F04_RS05980;Name=C9F04_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05980;old_locus_tag=C9F04_06170
NZ_PYKF01000230.1	Protein Homology	CDS	2197	4020	.	+	0	ID=cds-WP_146712409.1;Parent=gene-C9F04_RS05980;Dbxref=Genbank:WP_146712409.1;Name=WP_146712409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9F04_RS05980;product=aryl-sulfate sulfotransferase;protein_id=WP_146712409.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	4217	5380	.	-	.	ID=gene-C9F04_RS05985;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9F04_RS05985;old_locus_tag=C9F04_06175
NZ_PYKF01000230.1	Protein Homology	CDS	4217	5380	.	-	0	ID=cds-WP_031606086.1;Parent=gene-C9F04_RS05985;Dbxref=Genbank:WP_031606086.1;Name=WP_031606086.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9F04_RS05985;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_031606086.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	5390	7579	.	-	.	ID=gene-C9F04_RS05990;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9F04_RS05990;old_locus_tag=C9F04_06180
NZ_PYKF01000230.1	Protein Homology	CDS	5390	7579	.	-	0	ID=cds-WP_146712410.1;Parent=gene-C9F04_RS05990;Dbxref=Genbank:WP_146712410.1;Name=WP_146712410.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9F04_RS05990;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_146712410.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	7769	9100	.	+	.	ID=gene-C9F04_RS05995;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9F04_RS05995;old_locus_tag=C9F04_06185
NZ_PYKF01000230.1	Protein Homology	CDS	7769	9100	.	+	0	ID=cds-WP_146712411.1;Parent=gene-C9F04_RS05995;Dbxref=Genbank:WP_146712411.1;Name=WP_146712411.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9F04_RS05995;product=Xaa-Pro dipeptidase;protein_id=WP_146712411.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	9100	9714	.	+	.	ID=gene-C9F04_RS06000;Name=C9F04_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06000;old_locus_tag=C9F04_06190
NZ_PYKF01000230.1	Protein Homology	CDS	9100	9714	.	+	0	ID=cds-WP_000378898.1;Parent=gene-C9F04_RS06000;Dbxref=Genbank:WP_000378898.1;Name=WP_000378898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9F04_RS06000;product=IMPACT family protein;protein_id=WP_000378898.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	9753	11204	.	+	.	ID=gene-C9F04_RS06005;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9F04_RS06005;old_locus_tag=C9F04_06195
NZ_PYKF01000230.1	Protein Homology	CDS	9753	11204	.	+	0	ID=cds-WP_000545688.1;Parent=gene-C9F04_RS06005;Dbxref=Genbank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9F04_RS06005;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11
NZ_PYKF01000230.1	RefSeq	gene	11216	11761	.	+	.	ID=gene-C9F04_RS06010;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9F04_RS06010;old_locus_tag=C9F04_06200
NZ_PYKF01000230.1	Protein Homology	CDS	11216	11761	.	+	0	ID=cds-WP_000853982.1;Parent=gene-C9F04_RS06010;Dbxref=Genbank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9F04_RS06010;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11
##sequence-region NZ_PYKF01000030.1 1 12055
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000030.1	RefSeq	region	1	12055	.	+	.	ID=NZ_PYKF01000030.1:1..12055;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000030.1	RefSeq	gene	1	294	.	-	.	ID=gene-C9F04_RS00405;Name=C9F04_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00405;old_locus_tag=C9F04_00435;partial=true;start_range=.,1
NZ_PYKF01000030.1	Protein Homology	CDS	1	294	.	-	0	ID=cds-WP_038394536.1;Parent=gene-C9F04_RS00405;Dbxref=Genbank:WP_038394536.1;Name=WP_038394536.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F04_RS00405;partial=true;product=cation:proton antiporter;protein_id=WP_038394536.1;start_range=.,1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	294	845	.	-	.	ID=gene-C9F04_RS00410;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9F04_RS00410;old_locus_tag=C9F04_00440
NZ_PYKF01000030.1	Protein Homology	CDS	294	845	.	-	0	ID=cds-WP_000081820.1;Parent=gene-C9F04_RS00410;Dbxref=Genbank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9F04_RS00410;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	1111	3018	.	+	.	ID=gene-C9F04_RS00415;Name=C9F04_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00415;old_locus_tag=C9F04_00445
NZ_PYKF01000030.1	Protein Homology	CDS	1111	3018	.	+	0	ID=cds-WP_146712145.1;Parent=gene-C9F04_RS00415;Dbxref=Genbank:WP_146712145.1;Name=WP_146712145.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9F04_RS00415;product=ABC transporter ATP-binding protein;protein_id=WP_146712145.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	3057	3278	.	+	.	ID=gene-C9F04_RS00420;Name=C9F04_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00420;old_locus_tag=C9F04_00450
NZ_PYKF01000030.1	Protein Homology	CDS	3057	3278	.	+	0	ID=cds-WP_001582875.1;Parent=gene-C9F04_RS00420;Dbxref=Genbank:WP_001582875.1;Name=WP_001582875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9F04_RS00420;product=LysR family transcriptional regulator;protein_id=WP_001582875.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	3280	3591	.	-	.	ID=gene-C9F04_RS00425;Name=C9F04_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00425;old_locus_tag=C9F04_00455
NZ_PYKF01000030.1	Protein Homology	CDS	3280	3591	.	-	0	ID=cds-WP_000047689.1;Parent=gene-C9F04_RS00425;Dbxref=Genbank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9F04_RS00425;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	3789	4856	.	+	.	ID=gene-C9F04_RS00430;Name=C9F04_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00430;old_locus_tag=C9F04_00460
NZ_PYKF01000030.1	Protein Homology	CDS	3789	4856	.	+	0	ID=cds-WP_146712146.1;Parent=gene-C9F04_RS00430;Dbxref=Genbank:WP_146712146.1;Name=WP_146712146.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9F04_RS00430;product=hydrolase;protein_id=WP_146712146.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	4853	5071	.	+	.	ID=gene-C9F04_RS00435;Name=C9F04_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00435;old_locus_tag=C9F04_00465
NZ_PYKF01000030.1	Protein Homology	CDS	4853	5071	.	+	0	ID=cds-WP_000586568.1;Parent=gene-C9F04_RS00435;Dbxref=Genbank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9F04_RS00435;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	5123	5992	.	+	.	ID=gene-C9F04_RS00440;Name=C9F04_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00440;old_locus_tag=C9F04_00470
NZ_PYKF01000030.1	Protein Homology	CDS	5123	5992	.	+	0	ID=cds-WP_001274690.1;Parent=gene-C9F04_RS00440;Dbxref=Genbank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9F04_RS00440;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	6088	6492	.	-	.	ID=gene-C9F04_RS00445;Name=C9F04_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00445;old_locus_tag=C9F04_00475
NZ_PYKF01000030.1	Protein Homology	CDS	6088	6492	.	-	0	ID=cds-WP_146712147.1;Parent=gene-C9F04_RS00445;Dbxref=Genbank:WP_146712147.1;Name=WP_146712147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9F04_RS00445;product=OsmC family protein;protein_id=WP_146712147.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	6800	7432	.	+	.	ID=gene-C9F04_RS00450;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9F04_RS00450;old_locus_tag=C9F04_00480
NZ_PYKF01000030.1	Protein Homology	CDS	6800	7432	.	+	0	ID=cds-WP_000242758.1;Parent=gene-C9F04_RS00450;Dbxref=Genbank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9F04_RS00450;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	7481	9568	.	+	.	ID=gene-C9F04_RS00455;Name=C9F04_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00455;old_locus_tag=C9F04_00485
NZ_PYKF01000030.1	Protein Homology	CDS	7481	9568	.	+	0	ID=cds-WP_000269311.1;Parent=gene-C9F04_RS00455;Dbxref=Genbank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9F04_RS00455;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	9611	10828	.	-	.	ID=gene-C9F04_RS00460;Name=C9F04_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00460;old_locus_tag=C9F04_00490
NZ_PYKF01000030.1	Protein Homology	CDS	9611	10828	.	-	0	ID=cds-WP_000190023.1;Parent=gene-C9F04_RS00460;Dbxref=Genbank:WP_000190023.1;Name=WP_000190023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9F04_RS00460;product=aspartate aminotransferase family protein;protein_id=WP_000190023.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	10914	11477	.	-	.	ID=gene-C9F04_RS00465;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9F04_RS00465;old_locus_tag=C9F04_00495
NZ_PYKF01000030.1	Protein Homology	CDS	10914	11477	.	-	0	ID=cds-WP_000601878.1;Parent=gene-C9F04_RS00465;Dbxref=Genbank:WP_000601878.1;Name=WP_000601878.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9F04_RS00465;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601878.1;transl_table=11
NZ_PYKF01000030.1	RefSeq	gene	11509	12055	.	-	.	ID=gene-C9F04_RS00470;Name=C9F04_RS00470;end_range=12055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00470;old_locus_tag=C9F04_00500;partial=true
NZ_PYKF01000030.1	Protein Homology	CDS	11509	12055	.	-	1	ID=cds-WP_146712148.1;Parent=gene-C9F04_RS00470;Dbxref=Genbank:WP_146712148.1;Name=WP_146712148.1;end_range=12055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9F04_RS00470;partial=true;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_146712148.1;transl_table=11
##sequence-region NZ_PYKF01000217.1 1 11966
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000217.1	RefSeq	region	1	11966	.	+	.	ID=NZ_PYKF01000217.1:1..11966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000217.1	RefSeq	gene	1	982	.	-	.	ID=gene-C9F04_RS05370;Name=C9F04_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05370;old_locus_tag=C9F04_05545;partial=true;start_range=.,1
NZ_PYKF01000217.1	Protein Homology	CDS	1	982	.	-	0	ID=cds-WP_146712385.1;Parent=gene-C9F04_RS05370;Dbxref=Genbank:WP_146712385.1;Name=WP_146712385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9F04_RS05370;partial=true;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_146712385.1;start_range=.,1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	979	2205	.	-	.	ID=gene-C9F04_RS05375;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9F04_RS05375;old_locus_tag=C9F04_05550
NZ_PYKF01000217.1	Protein Homology	CDS	979	2205	.	-	0	ID=cds-WP_146712386.1;Parent=gene-C9F04_RS05375;Dbxref=Genbank:WP_146712386.1;Name=WP_146712386.1;Ontology_term=GO:0034229,GO:0034228,GO:0016021;gbkey=CDS;gene=eutH;go_component=integral component of membrane|0016021||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9F04_RS05375;product=ethanolamine utilization protein EutH;protein_id=WP_146712386.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	2325	3512	.	-	.	ID=gene-C9F04_RS05380;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9F04_RS05380;old_locus_tag=C9F04_05555
NZ_PYKF01000217.1	Protein Homology	CDS	2325	3512	.	-	0	ID=cds-WP_146712387.1;Parent=gene-C9F04_RS05380;Dbxref=Genbank:WP_146712387.1;Name=WP_146712387.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9F04_RS05380;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_146712387.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	3502	4341	.	-	.	ID=gene-C9F04_RS05385;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9F04_RS05385;old_locus_tag=C9F04_05560
NZ_PYKF01000217.1	Protein Homology	CDS	3502	4341	.	-	0	ID=cds-WP_146712388.1;Parent=gene-C9F04_RS05385;Dbxref=Genbank:WP_146712388.1;Name=WP_146712388.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9F04_RS05385;product=ethanolamine utilization protein EutJ;protein_id=WP_146712388.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	pseudogene	4352	5164	.	-	.	ID=gene-C9F04_RS05390;Name=C9F04_RS05390;end_range=5164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05390;old_locus_tag=C9F04_05565;partial=true;pseudo=true
NZ_PYKF01000217.1	Protein Homology	CDS	4352	5164	.	-	0	ID=cds-C9F04_RS05390;Parent=gene-C9F04_RS05390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F04_RS05390;partial=true;product=aldehyde dehydrogenase;pseudo=true;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	5231	5896	.	-	.	ID=gene-C9F04_RS05395;Name=C9F04_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05395;old_locus_tag=C9F04_05570
NZ_PYKF01000217.1	Protein Homology	CDS	5231	5896	.	-	0	ID=cds-WP_000187489.1;Parent=gene-C9F04_RS05395;Dbxref=Genbank:WP_000187489.1;Name=WP_000187489.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9F04_RS05395;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_000187489.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	6066	6311	.	+	.	ID=gene-C9F04_RS05400;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9F04_RS05400;old_locus_tag=C9F04_05575
NZ_PYKF01000217.1	Protein Homology	CDS	6066	6311	.	+	0	ID=cds-WP_001541054.1;Parent=gene-C9F04_RS05400;Dbxref=Genbank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9F04_RS05400;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	6335	7978	.	-	.	ID=gene-C9F04_RS05405;Name=C9F04_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05405;old_locus_tag=C9F04_05580
NZ_PYKF01000217.1	Protein Homology	CDS	6335	7978	.	-	0	ID=cds-WP_000789678.1;Parent=gene-C9F04_RS05405;Dbxref=Genbank:WP_000789678.1;Name=WP_000789678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9F04_RS05405;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789678.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	8178	10376	.	-	.	ID=gene-C9F04_RS05410;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9F04_RS05410;old_locus_tag=C9F04_05585
NZ_PYKF01000217.1	Protein Homology	CDS	8178	10376	.	-	0	ID=cds-WP_146712389.1;Parent=gene-C9F04_RS05410;Dbxref=Genbank:WP_146712389.1;Name=WP_146712389.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016021;gbkey=CDS;gene=zntA;go_component=integral component of membrane|0016021||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=C9F04_RS05410;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_146712389.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	10457	11083	.	-	.	ID=gene-C9F04_RS05415;Name=C9F04_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05415;old_locus_tag=C9F04_05590
NZ_PYKF01000217.1	Protein Homology	CDS	10457	11083	.	-	0	ID=cds-WP_000964735.1;Parent=gene-C9F04_RS05415;Dbxref=Genbank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9F04_RS05415;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	11225	11596	.	+	.	ID=gene-C9F04_RS05420;Name=C9F04_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05420;old_locus_tag=C9F04_05595
NZ_PYKF01000217.1	Protein Homology	CDS	11225	11596	.	+	0	ID=cds-WP_000042851.1;Parent=gene-C9F04_RS05420;Dbxref=Genbank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9F04_RS05420;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11
NZ_PYKF01000217.1	RefSeq	gene	11618	11887	.	-	.	ID=gene-C9F04_RS05425;Name=C9F04_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05425;old_locus_tag=C9F04_05600
NZ_PYKF01000217.1	Protein Homology	CDS	11618	11887	.	-	0	ID=cds-WP_167850410.1;Parent=gene-C9F04_RS05425;Dbxref=Genbank:WP_167850410.1;Name=WP_167850410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9F04_RS05425;product=DUF1145 family protein;protein_id=WP_167850410.1;transl_table=11
##sequence-region NZ_PYKF01000512.1 1 11853
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000512.1	RefSeq	region	1	11853	.	+	.	ID=NZ_PYKF01000512.1:1..11853;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000512.1	RefSeq	gene	1	1297	.	+	.	ID=gene-C9F04_RS15335;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9F04_RS15335;old_locus_tag=C9F04_15825;partial=true;start_range=.,1
NZ_PYKF01000512.1	Protein Homology	CDS	1	1297	.	+	1	ID=cds-WP_146712839.1;Parent=gene-C9F04_RS15335;Dbxref=Genbank:WP_146712839.1;Name=WP_146712839.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9F04_RS15335;partial=true;product=IMP dehydrogenase;protein_id=WP_146712839.1;start_range=.,1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	1367	2944	.	+	.	ID=gene-C9F04_RS15340;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9F04_RS15340;old_locus_tag=C9F04_15830
NZ_PYKF01000512.1	Protein Homology	CDS	1367	2944	.	+	0	ID=cds-WP_000138293.1;Parent=gene-C9F04_RS15340;Dbxref=Genbank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F04_RS15340;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	3068	3394	.	+	.	ID=gene-C9F04_RS15345;Name=C9F04_RS15345;end_range=3394,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15345;old_locus_tag=C9F04_15835;partial=true;pseudo=true;start_range=.,3068
NZ_PYKF01000512.1	Protein Homology	CDS	3068	3394	.	+	0	ID=cds-C9F04_RS15345;Parent=gene-C9F04_RS15345;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=3394,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=C9F04_RS15345;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,3068;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	3474	3803	.	-	.	ID=gene-C9F04_RS15350;Name=C9F04_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15350;old_locus_tag=C9F04_15840
NZ_PYKF01000512.1	Protein Homology	CDS	3474	3803	.	-	0	ID=cds-WP_135369144.1;Parent=gene-C9F04_RS15350;Dbxref=Genbank:WP_135369144.1;Name=WP_135369144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9F04_RS15350;product=DUF1493 family protein;protein_id=WP_135369144.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	4029	4109	.	+	.	ID=gene-C9F04_RS27085;Name=C9F04_RS27085;end_range=4109,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27085;partial=true;pseudo=true
NZ_PYKF01000512.1	Protein Homology	CDS	4029	4109	.	+	0	ID=cds-C9F04_RS27085;Parent=gene-C9F04_RS27085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9F04_RS27085;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	4345	4725	.	-	.	ID=gene-C9F04_RS15360;Name=C9F04_RS15360;end_range=4725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15360;old_locus_tag=C9F04_15850;partial=true;pseudo=true;start_range=.,4345
NZ_PYKF01000512.1	Protein Homology	CDS	4345	4725	.	-	0	ID=cds-C9F04_RS15360;Parent=gene-C9F04_RS15360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9F04_RS15360;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4345;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	4824	4916	.	-	.	ID=gene-C9F04_RS15365;Name=C9F04_RS15365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15365;old_locus_tag=C9F04_15855;partial=true;pseudo=true;start_range=.,4824
NZ_PYKF01000512.1	Protein Homology	CDS	4824	4916	.	-	0	ID=cds-C9F04_RS15365;Parent=gene-C9F04_RS15365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=C9F04_RS15365;partial=true;product=integrase;pseudo=true;start_range=.,4824;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	5042	6079	.	-	.	ID=gene-C9F04_RS15370;Name=C9F04_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15370;old_locus_tag=C9F04_15860
NZ_PYKF01000512.1	Protein Homology	CDS	5042	6079	.	-	0	ID=cds-WP_017441380.1;Parent=gene-C9F04_RS15370;Dbxref=Genbank:WP_017441380.1;Name=WP_017441380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441380.1;locus_tag=C9F04_RS15370;product=hypothetical protein;protein_id=WP_017441380.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	6163	6318	.	+	.	ID=gene-C9F04_RS26640;Name=C9F04_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26640
NZ_PYKF01000512.1	Protein Homology	CDS	6163	6318	.	+	0	ID=cds-WP_000568804.1;Parent=gene-C9F04_RS26640;Dbxref=Genbank:WP_000568804.1;Name=WP_000568804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568804.1;locus_tag=C9F04_RS26640;product=hypothetical protein;protein_id=WP_000568804.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	6570	6713	.	+	.	ID=gene-C9F04_RS27090;Name=C9F04_RS27090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27090;partial=true;pseudo=true;start_range=.,6570
NZ_PYKF01000512.1	Protein Homology	CDS	6570	6713	.	+	0	ID=cds-C9F04_RS27090;Parent=gene-C9F04_RS27090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9F04_RS27090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6570;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	6879	7418	.	-	.	ID=gene-C9F04_RS15380;Name=C9F04_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15380;old_locus_tag=C9F04_15870
NZ_PYKF01000512.1	Protein Homology	CDS	6879	7418	.	-	0	ID=cds-WP_146712840.1;Parent=gene-C9F04_RS15380;Dbxref=Genbank:WP_146712840.1;Name=WP_146712840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755162.1;locus_tag=C9F04_RS15380;product=DUF5384 family protein;protein_id=WP_146712840.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	7434	7949	.	-	.	ID=gene-C9F04_RS15385;Name=C9F04_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15385;old_locus_tag=C9F04_15875
NZ_PYKF01000512.1	Protein Homology	CDS	7434	7949	.	-	0	ID=cds-WP_001009636.1;Parent=gene-C9F04_RS15385;Dbxref=Genbank:WP_001009636.1;Name=WP_001009636.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.2;locus_tag=C9F04_RS15385;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001009636.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	8190	8381	.	-	.	ID=gene-C9F04_RS15390;Name=C9F04_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15390;old_locus_tag=C9F04_15880
NZ_PYKF01000512.1	Protein Homology	CDS	8190	8381	.	-	0	ID=cds-WP_000075924.1;Parent=gene-C9F04_RS15390;Dbxref=Genbank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9F04_RS15390;product=DUF2633 family protein;protein_id=WP_000075924.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	8560	8697	.	+	.	ID=gene-C9F04_RS15395;Name=C9F04_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15395;old_locus_tag=C9F04_15885
NZ_PYKF01000512.1	Protein Homology	CDS	8560	8697	.	+	0	ID=cds-WP_001540598.1;Parent=gene-C9F04_RS15395;Dbxref=Genbank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9F04_RS15395;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	gene	8794	11007	.	+	.	ID=gene-C9F04_RS15400;Name=C9F04_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15400;old_locus_tag=C9F04_15890
NZ_PYKF01000512.1	Protein Homology	CDS	8794	11007	.	+	0	ID=cds-WP_146712841.1;Parent=gene-C9F04_RS15400;Dbxref=Genbank:WP_146712841.1;Name=WP_146712841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9F04_RS15400;product=sensor domain-containing phosphodiesterase;protein_id=WP_146712841.1;transl_table=11
NZ_PYKF01000512.1	RefSeq	pseudogene	11043	11853	.	-	.	ID=gene-C9F04_RS15405;Name=C9F04_RS15405;end_range=11853,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15405;old_locus_tag=C9F04_15895;partial=true;pseudo=true
NZ_PYKF01000512.1	Protein Homology	CDS	11043	11853	.	-	1	ID=cds-C9F04_RS15405;Parent=gene-C9F04_RS15405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9F04_RS15405;partial=true;product=exopolyphosphatase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000794.1 1 11846
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000794.1	RefSeq	region	1	11846	.	+	.	ID=NZ_PYKF01000794.1:1..11846;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000794.1	RefSeq	gene	1	588	.	-	.	ID=gene-C9F04_RS24725;Name=C9F04_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24725;old_locus_tag=C9F04_25570;partial=true;start_range=.,1
NZ_PYKF01000794.1	Protein Homology	CDS	1	588	.	-	0	ID=cds-WP_186799095.1;Parent=gene-C9F04_RS24725;Dbxref=Genbank:WP_186799095.1;Name=WP_186799095.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F04_RS24725;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_186799095.1;start_range=.,1;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	611	1804	.	-	.	ID=gene-C9F04_RS24730;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9F04_RS24730;old_locus_tag=C9F04_25575
NZ_PYKF01000794.1	Protein Homology	CDS	611	1804	.	-	0	ID=cds-WP_146713319.1;Parent=gene-C9F04_RS24730;Dbxref=Genbank:WP_146713319.1;Name=WP_146713319.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9F04_RS24730;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_146713319.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	1946	2599	.	+	.	ID=gene-C9F04_RS24735;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9F04_RS24735;old_locus_tag=C9F04_25580
NZ_PYKF01000794.1	Protein Homology	CDS	1946	2599	.	+	0	ID=cds-WP_000101755.1;Parent=gene-C9F04_RS24735;Dbxref=Genbank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9F04_RS24735;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	2718	6080	.	+	.	ID=gene-C9F04_RS24740;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9F04_RS24740;old_locus_tag=C9F04_25585
NZ_PYKF01000794.1	Protein Homology	CDS	2718	6080	.	+	0	ID=cds-WP_000178249.1;Parent=gene-C9F04_RS24740;Dbxref=Genbank:WP_000178249.1;Name=WP_000178249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9F04_RS24740;product=mechanosensitive channel MscK;protein_id=WP_000178249.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	pseudogene	6122	6616	.	-	.	ID=gene-C9F04_RS24745;Name=C9F04_RS24745;end_range=6616,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24745;old_locus_tag=C9F04_25590;partial=true;pseudo=true
NZ_PYKF01000794.1	Protein Homology	CDS	6122	6616	.	-	0	ID=cds-C9F04_RS24745;Parent=gene-C9F04_RS24745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6616,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9F04_RS24745;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
NZ_PYKF01000794.1	RefSeq	pseudogene	6736	7182	.	-	.	ID=gene-C9F04_RS24750;Name=C9F04_RS24750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24750;old_locus_tag=C9F04_25595;partial=true;pseudo=true;start_range=.,6736
NZ_PYKF01000794.1	Protein Homology	CDS	6736	7182	.	-	0	ID=cds-C9F04_RS24750;Parent=gene-C9F04_RS24750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9F04_RS24750;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,6736;transl_table=11
NZ_PYKF01000794.1	RefSeq	pseudogene	7255	7419	.	-	.	ID=gene-C9F04_RS24755;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=pseudogene;locus_tag=C9F04_RS24755;old_locus_tag=C9F04_25600;partial=true;pseudo=true;start_range=.,7255
NZ_PYKF01000794.1	Protein Homology	CDS	7255	7419	.	-	0	ID=cds-C9F04_RS24755;Parent=gene-C9F04_RS24755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9F04_RS24755;partial=true;product=pleiotropic regulatory protein RsmS;pseudo=true;start_range=.,7255;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	7433	7960	.	-	.	ID=gene-C9F04_RS24760;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9F04_RS24760;old_locus_tag=C9F04_25605
NZ_PYKF01000794.1	Protein Homology	CDS	7433	7960	.	-	0	ID=cds-WP_186799096.1;Parent=gene-C9F04_RS24760;Dbxref=Genbank:WP_186799096.1;Name=WP_186799096.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9F04_RS24760;product=primosomal replication protein N'';protein_id=WP_186799096.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	8029	8406	.	+	.	ID=gene-C9F04_RS24765;Name=C9F04_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24765;old_locus_tag=C9F04_25610
NZ_PYKF01000794.1	Protein Homology	CDS	8029	8406	.	+	0	ID=cds-WP_146713320.1;Parent=gene-C9F04_RS24765;Dbxref=Genbank:WP_146713320.1;Name=WP_146713320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9F04_RS24765;product=DUF454 family protein;protein_id=WP_146713320.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	8559	9110	.	+	.	ID=gene-C9F04_RS24770;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9F04_RS24770;old_locus_tag=C9F04_25620
NZ_PYKF01000794.1	Protein Homology	CDS	8559	9110	.	+	0	ID=cds-WP_000127350.1;Parent=gene-C9F04_RS24770;Dbxref=Genbank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9F04_RS24770;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11
NZ_PYKF01000794.1	RefSeq	pseudogene	9224	10492	.	+	.	ID=gene-C9F04_RS24775;Name=dnaX;end_range=10492,.;gbkey=Gene;gene=dnaX;gene_biotype=pseudogene;locus_tag=C9F04_RS24775;old_locus_tag=C9F04_25625;partial=true;pseudo=true
NZ_PYKF01000794.1	Protein Homology	CDS	9224	10492	.	+	0	ID=cds-C9F04_RS24775;Parent=gene-C9F04_RS24775;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;end_range=10492,.;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706363.1;locus_tag=C9F04_RS24775;partial=true;product=DNA polymerase III subunit gamma/tau;pseudo=true;transl_table=11
NZ_PYKF01000794.1	RefSeq	pseudogene	10519	11616	.	+	.	ID=gene-C9F04_RS24780;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=pseudogene;locus_tag=C9F04_RS24780;old_locus_tag=C9F04_25630;partial=true;pseudo=true;start_range=.,10519
NZ_PYKF01000794.1	Protein Homology	CDS	10519	11616	.	+	0	ID=cds-C9F04_RS24780;Parent=gene-C9F04_RS24780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=C9F04_RS24780;partial=true;product=multidrug efflux RND transporter subunit MdtA;pseudo=true;start_range=.,10519;transl_table=11
NZ_PYKF01000794.1	RefSeq	gene	11616	11846	.	+	.	ID=gene-C9F04_RS24785;Name=C9F04_RS24785;end_range=11846,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24785;old_locus_tag=C9F04_25635;partial=true
NZ_PYKF01000794.1	Protein Homology	CDS	11616	11846	.	+	0	ID=cds-WP_186799097.1;Parent=gene-C9F04_RS24785;Dbxref=Genbank:WP_186799097.1;Name=WP_186799097.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=11846,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9F04_RS24785;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_186799097.1;transl_table=11
##sequence-region NZ_PYKF01000373.1 1 11707
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000373.1	RefSeq	region	1	11707	.	+	.	ID=NZ_PYKF01000373.1:1..11707;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000373.1	RefSeq	gene	1	1906	.	-	.	ID=gene-C9F04_RS10905;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9F04_RS10905;old_locus_tag=C9F04_11260;partial=true;start_range=.,1
NZ_PYKF01000373.1	Protein Homology	CDS	1	1906	.	-	0	ID=cds-WP_146712628.1;Parent=gene-C9F04_RS10905;Dbxref=Genbank:WP_146712628.1;Name=WP_146712628.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F04_RS10905;partial=true;product=translation initiation factor IF-2;protein_id=WP_146712628.1;start_range=.,1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	1931	3433	.	-	.	ID=gene-C9F04_RS10910;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9F04_RS10910;old_locus_tag=C9F04_11265
NZ_PYKF01000373.1	Protein Homology	CDS	1931	3433	.	-	0	ID=cds-WP_001031038.1;Parent=gene-C9F04_RS10910;Dbxref=Genbank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9F04_RS10910;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	3461	3913	.	-	.	ID=gene-C9F04_RS10915;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9F04_RS10915;old_locus_tag=C9F04_11270
NZ_PYKF01000373.1	Protein Homology	CDS	3461	3913	.	-	0	ID=cds-WP_146712629.1;Parent=gene-C9F04_RS10915;Dbxref=Genbank:WP_146712629.1;Name=WP_146712629.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9F04_RS10915;product=ribosome maturation factor RimP;protein_id=WP_146712629.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	4121	4197	.	-	.	ID=gene-C9F04_RS10920;Name=C9F04_RS10920;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10920;old_locus_tag=C9F04_11275
NZ_PYKF01000373.1	tRNAscan-SE	tRNA	4121	4197	.	-	.	ID=rna-C9F04_RS10920;Parent=gene-C9F04_RS10920;anticodon=(pos:complement(4161..4163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10920;product=tRNA-Met
NZ_PYKF01000373.1	tRNAscan-SE	exon	4121	4197	.	-	.	ID=exon-C9F04_RS10920-1;Parent=rna-C9F04_RS10920;anticodon=(pos:complement(4161..4163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10920;product=tRNA-Met
NZ_PYKF01000373.1	RefSeq	gene	4541	5884	.	+	.	ID=gene-C9F04_RS10925;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9F04_RS10925;old_locus_tag=C9F04_11280
NZ_PYKF01000373.1	Protein Homology	CDS	4541	5884	.	+	0	ID=cds-WP_000207648.1;Parent=gene-C9F04_RS10925;Dbxref=Genbank:WP_000207648.1;Name=WP_000207648.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9F04_RS10925;product=argininosuccinate synthase;protein_id=WP_000207648.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	5970	7034	.	-	.	ID=gene-C9F04_RS10930;Name=C9F04_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10930;old_locus_tag=C9F04_11285
NZ_PYKF01000373.1	Protein Homology	CDS	5970	7034	.	-	0	ID=cds-WP_000051504.1;Parent=gene-C9F04_RS10930;Dbxref=Genbank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=C9F04_RS10930;product=YwqG family protein;protein_id=WP_000051504.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	7370	7456	.	-	.	ID=gene-C9F04_RS10935;Name=C9F04_RS10935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10935;old_locus_tag=C9F04_11290
NZ_PYKF01000373.1	tRNAscan-SE	tRNA	7370	7456	.	-	.	ID=rna-C9F04_RS10935;Parent=gene-C9F04_RS10935;anticodon=(pos:complement(7420..7422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10935;product=tRNA-Leu
NZ_PYKF01000373.1	tRNAscan-SE	exon	7370	7456	.	-	.	ID=exon-C9F04_RS10935-1;Parent=rna-C9F04_RS10935;anticodon=(pos:complement(7420..7422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10935;product=tRNA-Leu
NZ_PYKF01000373.1	RefSeq	gene	7470	7802	.	-	.	ID=gene-C9F04_RS10940;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9F04_RS10940;old_locus_tag=C9F04_11295
NZ_PYKF01000373.1	Protein Homology	CDS	7470	7802	.	-	0	ID=cds-WP_000272680.1;Parent=gene-C9F04_RS10940;Dbxref=Genbank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9F04_RS10940;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	8025	9362	.	-	.	ID=gene-C9F04_RS10945;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9F04_RS10945;old_locus_tag=C9F04_11300
NZ_PYKF01000373.1	Protein Homology	CDS	8025	9362	.	-	0	ID=cds-WP_000071169.1;Parent=gene-C9F04_RS10945;Dbxref=Genbank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9F04_RS10945;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	9355	10203	.	-	.	ID=gene-C9F04_RS10950;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9F04_RS10950;old_locus_tag=C9F04_11305
NZ_PYKF01000373.1	Protein Homology	CDS	9355	10203	.	-	0	ID=cds-WP_146712630.1;Parent=gene-C9F04_RS10950;Dbxref=Genbank:WP_146712630.1;Name=WP_146712630.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9F04_RS10950;product=dihydropteroate synthase;protein_id=WP_146712630.1;transl_table=11
NZ_PYKF01000373.1	RefSeq	gene	10308	11707	.	-	.	ID=gene-C9F04_RS10955;Name=ftsH;end_range=11707,.;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9F04_RS10955;old_locus_tag=C9F04_11310;partial=true
NZ_PYKF01000373.1	Protein Homology	CDS	10308	11707	.	-	2	ID=cds-WP_146712631.1;Parent=gene-C9F04_RS10955;Dbxref=Genbank:WP_146712631.1;Name=WP_146712631.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;end_range=11707,.;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F04_RS10955;partial=true;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_146712631.1;transl_table=11
##sequence-region NZ_PYKF01000103.1 1 11666
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000103.1	RefSeq	region	1	11666	.	+	.	ID=NZ_PYKF01000103.1:1..11666;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000103.1	RefSeq	gene	1	1770	.	+	.	ID=gene-C9F04_RS01930;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9F04_RS01930;old_locus_tag=C9F04_02015;partial=true;start_range=.,1
NZ_PYKF01000103.1	Protein Homology	CDS	1	1770	.	+	0	ID=cds-WP_146712217.1;Parent=gene-C9F04_RS01930;Dbxref=Genbank:WP_146712217.1;Name=WP_146712217.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F04_RS01930;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_146712217.1;start_range=.,1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	1775	2074	.	+	.	ID=gene-C9F04_RS01935;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9F04_RS01935;old_locus_tag=C9F04_02020
NZ_PYKF01000103.1	Protein Homology	CDS	1775	2074	.	+	0	ID=cds-WP_001229266.1;Parent=gene-C9F04_RS01935;Dbxref=Genbank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9F04_RS01935;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	2277	3257	.	+	.	ID=gene-C9F04_RS01940;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9F04_RS01940;old_locus_tag=C9F04_02025
NZ_PYKF01000103.1	Protein Homology	CDS	2277	3257	.	+	0	ID=cds-WP_000954982.1;Parent=gene-C9F04_RS01940;Dbxref=Genbank:WP_000954982.1;Name=WP_000954982.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9F04_RS01940;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954982.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	3349	3900	.	+	.	ID=gene-C9F04_RS01945;Name=C9F04_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01945;old_locus_tag=C9F04_02030
NZ_PYKF01000103.1	Protein Homology	CDS	3349	3900	.	+	0	ID=cds-WP_094889204.1;Parent=gene-C9F04_RS01945;Dbxref=Genbank:WP_094889204.1;Name=WP_094889204.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9F04_RS01945;product=glutathione peroxidase;protein_id=WP_094889204.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	3900	4649	.	+	.	ID=gene-C9F04_RS01950;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9F04_RS01950;old_locus_tag=C9F04_02035
NZ_PYKF01000103.1	Protein Homology	CDS	3900	4649	.	+	0	ID=cds-WP_000080607.1;Parent=gene-C9F04_RS01950;Dbxref=Genbank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9F04_RS01950;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	4726	5190	.	+	.	ID=gene-C9F04_RS01955;Name=C9F04_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01955;old_locus_tag=C9F04_02040
NZ_PYKF01000103.1	Protein Homology	CDS	4726	5190	.	+	0	ID=cds-WP_001213258.1;Parent=gene-C9F04_RS01955;Dbxref=Genbank:WP_001213258.1;Name=WP_001213258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9F04_RS01955;product=NlpC/P60 family protein;protein_id=WP_001213258.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	5504	6214	.	+	.	ID=gene-C9F04_RS01960;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9F04_RS01960;old_locus_tag=C9F04_02045
NZ_PYKF01000103.1	Protein Homology	CDS	5504	6214	.	+	0	ID=cds-WP_146712218.1;Parent=gene-C9F04_RS01960;Dbxref=Genbank:WP_146712218.1;Name=WP_146712218.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9F04_RS01960;product=anti-FlhDC factor YdiV;protein_id=WP_146712218.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	6276	7718	.	+	.	ID=gene-C9F04_RS01965;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9F04_RS01965;old_locus_tag=C9F04_02050
NZ_PYKF01000103.1	Protein Homology	CDS	6276	7718	.	+	0	ID=cds-WP_135369769.1;Parent=gene-C9F04_RS01965;Dbxref=Genbank:WP_135369769.1;Name=WP_135369769.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9F04_RS01965;product=protein adenylyltransferase SelO;protein_id=WP_135369769.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	7753	7944	.	-	.	ID=gene-C9F04_RS01970;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9F04_RS01970;old_locus_tag=C9F04_02055
NZ_PYKF01000103.1	Protein Homology	CDS	7753	7944	.	-	0	ID=cds-WP_000089115.1;Parent=gene-C9F04_RS01970;Dbxref=Genbank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9F04_RS01970;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	8101	9147	.	-	.	ID=gene-C9F04_RS01975;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9F04_RS01975;old_locus_tag=C9F04_02060
NZ_PYKF01000103.1	Protein Homology	CDS	8101	9147	.	-	0	ID=cds-WP_001082196.1;Parent=gene-C9F04_RS01975;Dbxref=Genbank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9F04_RS01975;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	gene	9303	10136	.	-	.	ID=gene-C9F04_RS01980;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9F04_RS01980;old_locus_tag=C9F04_02065
NZ_PYKF01000103.1	Protein Homology	CDS	9303	10136	.	-	0	ID=cds-WP_146712219.1;Parent=gene-C9F04_RS01980;Dbxref=Genbank:WP_146712219.1;Name=WP_146712219.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9F04_RS01980;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_146712219.1;transl_table=11
NZ_PYKF01000103.1	RefSeq	pseudogene	10473	11666	.	+	.	ID=gene-C9F04_RS01985;Name=C9F04_RS01985;end_range=11666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01985;old_locus_tag=C9F04_02070;partial=true;pseudo=true
NZ_PYKF01000103.1	Protein Homology	CDS	10473	11666	.	+	0	ID=cds-C9F04_RS01985;Parent=gene-C9F04_RS01985;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9F04_RS01985;partial=true;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000476.1 1 27645
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000476.1	RefSeq	region	1	27645	.	+	.	ID=NZ_PYKF01000476.1:1..27645;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000476.1	RefSeq	pseudogene	1	839	.	+	.	ID=gene-C9F04_RS14245;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=pseudogene;locus_tag=C9F04_RS14245;old_locus_tag=C9F04_14705;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000476.1	Protein Homology	CDS	1	839	.	+	2	ID=cds-C9F04_RS14245;Parent=gene-C9F04_RS14245;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312831.1;locus_tag=C9F04_RS14245;partial=true;product=sulfofructosephosphate aldolase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	855	2096	.	+	.	ID=gene-C9F04_RS14250;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9F04_RS14250;old_locus_tag=C9F04_14710
NZ_PYKF01000476.1	Protein Homology	CDS	855	2096	.	+	0	ID=cds-WP_146712792.1;Parent=gene-C9F04_RS14250;Dbxref=Genbank:WP_146712792.1;Name=WP_146712792.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=C9F04_RS14250;product=sulfoquinovose isomerase;protein_id=WP_146712792.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	2168	3070	.	+	.	ID=gene-C9F04_RS14255;Name=C9F04_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14255;old_locus_tag=C9F04_14715
NZ_PYKF01000476.1	Protein Homology	CDS	2168	3070	.	+	0	ID=cds-WP_024131638.1;Parent=gene-C9F04_RS14255;Dbxref=Genbank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=C9F04_RS14255;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	3159	4034	.	+	.	ID=gene-C9F04_RS14260;Name=C9F04_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14260;old_locus_tag=C9F04_14720
NZ_PYKF01000476.1	Protein Homology	CDS	3159	4034	.	+	0	ID=cds-WP_000345334.1;Parent=gene-C9F04_RS14260;Dbxref=Genbank:WP_000345334.1;Name=WP_000345334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9F04_RS14260;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	4158	6194	.	+	.	ID=gene-C9F04_RS14265;Name=C9F04_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14265;old_locus_tag=C9F04_14725
NZ_PYKF01000476.1	Protein Homology	CDS	4158	6194	.	+	0	ID=cds-WP_135369698.1;Parent=gene-C9F04_RS14265;Dbxref=Genbank:WP_135369698.1;Name=WP_135369698.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9F04_RS14265;product=alpha-glucosidase;protein_id=WP_135369698.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	6240	7622	.	+	.	ID=gene-C9F04_RS14270;Name=C9F04_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14270;old_locus_tag=C9F04_14730
NZ_PYKF01000476.1	Protein Homology	CDS	6240	7622	.	+	0	ID=cds-WP_000084233.1;Parent=gene-C9F04_RS14270;Dbxref=Genbank:WP_000084233.1;Name=WP_000084233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418313.4;locus_tag=C9F04_RS14270;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	7668	9086	.	+	.	ID=gene-C9F04_RS14275;Name=C9F04_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14275;old_locus_tag=C9F04_14735
NZ_PYKF01000476.1	Protein Homology	CDS	7668	9086	.	+	0	ID=cds-WP_001112785.1;Parent=gene-C9F04_RS14275;Dbxref=Genbank:WP_001112785.1;Name=WP_001112785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9F04_RS14275;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	9154	9846	.	+	.	ID=gene-C9F04_RS14280;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9F04_RS14280;old_locus_tag=C9F04_14740
NZ_PYKF01000476.1	Protein Homology	CDS	9154	9846	.	+	0	ID=cds-WP_000838829.1;Parent=gene-C9F04_RS14280;Dbxref=Genbank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9F04_RS14280;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	10003	10851	.	+	.	ID=gene-C9F04_RS14285;Name=C9F04_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14285;old_locus_tag=C9F04_14745
NZ_PYKF01000476.1	Protein Homology	CDS	10003	10851	.	+	0	ID=cds-WP_135369697.1;Parent=gene-C9F04_RS14285;Dbxref=Genbank:WP_135369697.1;Name=WP_135369697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9F04_RS14285;product=STM4015 family protein;protein_id=WP_135369697.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	10864	11889	.	+	.	ID=gene-C9F04_RS14290;Name=C9F04_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14290;old_locus_tag=C9F04_14750
NZ_PYKF01000476.1	Protein Homology	CDS	10864	11889	.	+	0	ID=cds-WP_135369696.1;Parent=gene-C9F04_RS14290;Dbxref=Genbank:WP_135369696.1;Name=WP_135369696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9F04_RS14290;product=STM4014 family protein;protein_id=WP_135369696.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	11882	12757	.	+	.	ID=gene-C9F04_RS14295;Name=C9F04_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14295;old_locus_tag=C9F04_14755
NZ_PYKF01000476.1	Protein Homology	CDS	11882	12757	.	+	0	ID=cds-WP_135369695.1;Parent=gene-C9F04_RS14295;Dbxref=Genbank:WP_135369695.1;Name=WP_135369695.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9F04_RS14295;product=STM4013/SEN3800 family hydrolase;protein_id=WP_135369695.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	12759	14000	.	+	.	ID=gene-C9F04_RS14300;Name=C9F04_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14300;old_locus_tag=C9F04_14760
NZ_PYKF01000476.1	Protein Homology	CDS	12759	14000	.	+	0	ID=cds-WP_135369694.1;Parent=gene-C9F04_RS14300;Dbxref=Genbank:WP_135369694.1;Name=WP_135369694.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9F04_RS14300;product=STM4012 family radical SAM protein;protein_id=WP_135369694.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	13997	14875	.	+	.	ID=gene-C9F04_RS14305;Name=C9F04_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14305;old_locus_tag=C9F04_14765
NZ_PYKF01000476.1	Protein Homology	CDS	13997	14875	.	+	0	ID=cds-WP_094885034.1;Parent=gene-C9F04_RS14305;Dbxref=Genbank:WP_094885034.1;Name=WP_094885034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9F04_RS14305;product=STM4011 family radical SAM protein;protein_id=WP_094885034.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	14860	15594	.	+	.	ID=gene-C9F04_RS14310;Name=C9F04_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14310;old_locus_tag=C9F04_14770
NZ_PYKF01000476.1	Protein Homology	CDS	14860	15594	.	+	0	ID=cds-WP_023250031.1;Parent=gene-C9F04_RS14310;Dbxref=Genbank:WP_023250031.1;Name=WP_023250031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9F04_RS14310;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_023250031.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	15649	17472	.	-	.	ID=gene-C9F04_RS14315;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9F04_RS14315;old_locus_tag=C9F04_14775
NZ_PYKF01000476.1	Protein Homology	CDS	15649	17472	.	-	0	ID=cds-WP_000572064.1;Parent=gene-C9F04_RS14315;Dbxref=Genbank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9F04_RS14315;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	17848	19257	.	+	.	ID=gene-C9F04_RS14320;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9F04_RS14320;old_locus_tag=C9F04_14785
NZ_PYKF01000476.1	Protein Homology	CDS	17848	19257	.	+	0	ID=cds-WP_146712793.1;Parent=gene-C9F04_RS14320;Dbxref=Genbank:WP_146712793.1;Name=WP_146712793.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F04_RS14320;product=glutamate--ammonia ligase;protein_id=WP_146712793.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	19532	20581	.	+	.	ID=gene-C9F04_RS14325;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9F04_RS14325;old_locus_tag=C9F04_14795
NZ_PYKF01000476.1	Protein Homology	CDS	19532	20581	.	+	0	ID=cds-WP_000146194.1;Parent=gene-C9F04_RS14325;Dbxref=Genbank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9F04_RS14325;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	20590	21999	.	+	.	ID=gene-C9F04_RS14330;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9F04_RS14330;old_locus_tag=C9F04_14800
NZ_PYKF01000476.1	Protein Homology	CDS	20590	21999	.	+	0	ID=cds-WP_146712794.1;Parent=gene-C9F04_RS14330;Dbxref=Genbank:WP_146712794.1;Name=WP_146712794.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9F04_RS14330;product=nitrogen regulation protein NR(I);protein_id=WP_146712794.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	22112	22222	.	+	.	ID=gene-C9F04_RS14335;Name=C9F04_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14335;old_locus_tag=C9F04_14805
NZ_PYKF01000476.1	Protein Homology	CDS	22112	22222	.	+	0	ID=cds-WP_001578131.1;Parent=gene-C9F04_RS14335;Dbxref=Genbank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9F04_RS14335;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	22312	23685	.	-	.	ID=gene-C9F04_RS14340;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9F04_RS14340;old_locus_tag=C9F04_14810
NZ_PYKF01000476.1	Protein Homology	CDS	22312	23685	.	-	0	ID=cds-WP_146712795.1;Parent=gene-C9F04_RS14340;Dbxref=Genbank:WP_146712795.1;Name=WP_146712795.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9F04_RS14340;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_146712795.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	23874	24389	.	-	.	ID=gene-C9F04_RS14345;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9F04_RS14345;old_locus_tag=C9F04_14815
NZ_PYKF01000476.1	Protein Homology	CDS	23874	24389	.	-	0	ID=cds-WP_000743292.1;Parent=gene-C9F04_RS14345;Dbxref=Genbank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9F04_RS14345;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	24508	24732	.	-	.	ID=gene-C9F04_RS14350;Name=C9F04_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14350;old_locus_tag=C9F04_14820
NZ_PYKF01000476.1	Protein Homology	CDS	24508	24732	.	-	0	ID=cds-WP_001541209.1;Parent=gene-C9F04_RS14350;Dbxref=Genbank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9F04_RS14350;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	24972	25607	.	+	.	ID=gene-C9F04_RS14355;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9F04_RS14355;old_locus_tag=C9F04_14825
NZ_PYKF01000476.1	Protein Homology	CDS	24972	25607	.	+	0	ID=cds-WP_001651150.1;Parent=gene-C9F04_RS14355;Dbxref=Genbank:WP_001651150.1;Name=WP_001651150.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9F04_RS14355;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001651150.1;transl_table=11
NZ_PYKF01000476.1	RefSeq	gene	25946	27645	.	-	.	ID=gene-C9F04_RS14360;Name=polA;end_range=27645,.;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9F04_RS14360;old_locus_tag=C9F04_14830;partial=true
NZ_PYKF01000476.1	Protein Homology	CDS	25946	27645	.	-	2	ID=cds-WP_146712796.1;Parent=gene-C9F04_RS14360;Dbxref=Genbank:WP_146712796.1;Name=WP_146712796.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;end_range=27645,.;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9F04_RS14360;partial=true;product=DNA polymerase I;protein_id=WP_146712796.1;transl_table=11
##sequence-region NZ_PYKF01000639.1 1 11660
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000639.1	RefSeq	region	1	11660	.	+	.	ID=NZ_PYKF01000639.1:1..11660;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000639.1	RefSeq	pseudogene	1	2308	.	+	.	ID=gene-C9F04_RS19555;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=pseudogene;locus_tag=C9F04_RS19555;old_locus_tag=C9F04_20190;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000639.1	Protein Homology	CDS	1	2308	.	+	1	ID=cds-C9F04_RS19555;Parent=gene-C9F04_RS19555;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9F04_RS19555;partial=true;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	2404	2967	.	-	.	ID=gene-C9F04_RS19560;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9F04_RS19560;old_locus_tag=C9F04_20195
NZ_PYKF01000639.1	Protein Homology	CDS	2404	2967	.	-	0	ID=cds-WP_000045725.1;Parent=gene-C9F04_RS19560;Dbxref=Genbank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9F04_RS19560;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	3290	5422	.	+	.	ID=gene-C9F04_RS19565;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9F04_RS19565;old_locus_tag=C9F04_20200
NZ_PYKF01000639.1	Protein Homology	CDS	3290	5422	.	+	0	ID=cds-WP_021000848.1;Parent=gene-C9F04_RS19565;Dbxref=Genbank:WP_021000848.1;Name=WP_021000848.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9F04_RS19565;product=intracellular growth attenuator protein IgaA;protein_id=WP_021000848.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	5487	6155	.	+	.	ID=gene-C9F04_RS19570;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9F04_RS19570;old_locus_tag=C9F04_20205
NZ_PYKF01000639.1	Protein Homology	CDS	5487	6155	.	+	0	ID=cds-WP_135369362.1;Parent=gene-C9F04_RS19570;Dbxref=Genbank:WP_135369362.1;Name=WP_135369362.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9F04_RS19570;product=GMP/IMP nucleotidase;protein_id=WP_135369362.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	6166	6567	.	+	.	ID=gene-C9F04_RS19575;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9F04_RS19575;old_locus_tag=C9F04_20210
NZ_PYKF01000639.1	Protein Homology	CDS	6166	6567	.	+	0	ID=cds-WP_001620580.1;Parent=gene-C9F04_RS19575;Dbxref=Genbank:WP_001620580.1;Name=WP_001620580.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9F04_RS19575;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_001620580.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	6592	7470	.	+	.	ID=gene-C9F04_RS19580;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9F04_RS19580;old_locus_tag=C9F04_20215
NZ_PYKF01000639.1	Protein Homology	CDS	6592	7470	.	+	0	ID=cds-WP_001135571.1;Parent=gene-C9F04_RS19580;Dbxref=Genbank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9F04_RS19580;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	7581	9290	.	-	.	ID=gene-C9F04_RS19585;Name=C9F04_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19585;old_locus_tag=C9F04_20220
NZ_PYKF01000639.1	Protein Homology	CDS	7581	9290	.	-	0	ID=cds-WP_146713051.1;Parent=gene-C9F04_RS19585;Dbxref=Genbank:WP_146713051.1;Name=WP_146713051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9F04_RS19585;product=DUF4153 domain-containing protein;protein_id=WP_146713051.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	9670	11289	.	+	.	ID=gene-C9F04_RS19590;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9F04_RS19590;old_locus_tag=C9F04_20225
NZ_PYKF01000639.1	Protein Homology	CDS	9670	11289	.	+	0	ID=cds-WP_001265689.1;Parent=gene-C9F04_RS19590;Dbxref=Genbank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9F04_RS19590;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11
NZ_PYKF01000639.1	RefSeq	gene	11364	11660	.	-	.	ID=gene-C9F04_RS19595;Name=C9F04_RS19595;end_range=11660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19595;old_locus_tag=C9F04_20230;partial=true
NZ_PYKF01000639.1	Protein Homology	CDS	11364	11660	.	-	0	ID=cds-WP_261771392.1;Parent=gene-C9F04_RS19595;Dbxref=Genbank:WP_261771392.1;Name=WP_261771392.1;end_range=11660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341923.1;locus_tag=C9F04_RS19595;partial=true;product=ATP-binding protein;protein_id=WP_261771392.1;transl_table=11
##sequence-region NZ_PYKF01000673.1 1 11612
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000673.1	RefSeq	region	1	11612	.	+	.	ID=NZ_PYKF01000673.1:1..11612;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000673.1	RefSeq	pseudogene	1	297	.	-	.	ID=gene-C9F04_RS20610;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=C9F04_RS20610;old_locus_tag=C9F04_21280;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000673.1	Protein Homology	CDS	1	297	.	-	0	ID=cds-C9F04_RS20610;Parent=gene-C9F04_RS20610;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905113.1;locus_tag=C9F04_RS20610;partial=true;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	300	812	.	-	.	ID=gene-C9F04_RS20615;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9F04_RS20615;old_locus_tag=C9F04_21285
NZ_PYKF01000673.1	Protein Homology	CDS	300	812	.	-	0	ID=cds-WP_000084604.1;Parent=gene-C9F04_RS20615;Dbxref=Genbank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9F04_RS20615;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	834	1823	.	-	.	ID=gene-C9F04_RS20620;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9F04_RS20620;old_locus_tag=C9F04_21290
NZ_PYKF01000673.1	Protein Homology	CDS	834	1823	.	-	0	ID=cds-WP_000168186.1;Parent=gene-C9F04_RS20620;Dbxref=Genbank:WP_000168186.1;Name=WP_000168186.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9F04_RS20620;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168186.1;transl_table=11
NZ_PYKF01000673.1	cmsearch	riboswitch	1811	1955	.	-	.	ID=id-NZ_PYKF01000673.1:1811..1955;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000673.1	RefSeq	gene	2220	3128	.	+	.	ID=gene-C9F04_RS20625;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9F04_RS20625;old_locus_tag=C9F04_21295
NZ_PYKF01000673.1	Protein Homology	CDS	2220	3128	.	+	0	ID=cds-WP_135369189.1;Parent=gene-C9F04_RS20625;Dbxref=Genbank:WP_135369189.1;Name=WP_135369189.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9F04_RS20625;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_135369189.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	pseudogene	3220	5487	.	-	.	ID=gene-C9F04_RS20630;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=C9F04_RS20630;old_locus_tag=C9F04_21300;pseudo=true
NZ_PYKF01000673.1	Protein Homology	CDS	3220	5487	.	-	0	ID=cds-C9F04_RS20630;Parent=gene-C9F04_RS20630;Note=internal stop;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F04_RS20630;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11
NZ_PYKF01000673.1	RefSeq	pseudogene	5495	5669	.	-	.	ID=gene-C9F04_RS27180;Name=C9F04_RS27180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27180;pseudo=true
NZ_PYKF01000673.1	Protein Homology	CDS	5495	5669	.	-	0	ID=cds-C9F04_RS27180;Parent=gene-C9F04_RS27180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9F04_RS27180;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	5977	7998	.	-	.	ID=gene-C9F04_RS20635;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9F04_RS20635;old_locus_tag=C9F04_21305
NZ_PYKF01000673.1	Protein Homology	CDS	5977	7998	.	-	0	ID=cds-WP_000042502.1;Parent=gene-C9F04_RS20635;Dbxref=Genbank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9F04_RS20635;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	8649	9335	.	-	.	ID=gene-C9F04_RS20645;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9F04_RS20645;old_locus_tag=C9F04_21315
NZ_PYKF01000673.1	Protein Homology	CDS	8649	9335	.	-	0	ID=cds-WP_135369191.1;Parent=gene-C9F04_RS20645;Dbxref=Genbank:WP_135369191.1;Name=WP_135369191.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9F04_RS20645;product=dethiobiotin synthase;protein_id=WP_135369191.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	9328	10083	.	-	.	ID=gene-C9F04_RS20650;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9F04_RS20650;old_locus_tag=C9F04_21320
NZ_PYKF01000673.1	Protein Homology	CDS	9328	10083	.	-	0	ID=cds-WP_000079914.1;Parent=gene-C9F04_RS20650;Dbxref=Genbank:WP_000079914.1;Name=WP_000079914.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9F04_RS20650;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079914.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	gene	10067	11224	.	-	.	ID=gene-C9F04_RS20655;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9F04_RS20655;old_locus_tag=C9F04_21325
NZ_PYKF01000673.1	Protein Homology	CDS	10067	11224	.	-	0	ID=cds-WP_000118943.1;Parent=gene-C9F04_RS20655;Dbxref=Genbank:WP_000118943.1;Name=WP_000118943.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9F04_RS20655;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118943.1;transl_table=11
NZ_PYKF01000673.1	RefSeq	pseudogene	11221	11612	.	-	.	ID=gene-C9F04_RS20660;Name=C9F04_RS20660;end_range=11612,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20660;old_locus_tag=C9F04_21330;partial=true;pseudo=true
NZ_PYKF01000673.1	Protein Homology	CDS	11221	11612	.	-	2	ID=cds-C9F04_RS20660;Parent=gene-C9F04_RS20660;Note=catalyzes the formation of biotin from dethiobiotin%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9F04_RS20660;partial=true;product=biotin synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000458.1 1 11597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000458.1	RefSeq	region	1	11597	.	+	.	ID=NZ_PYKF01000458.1:1..11597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000458.1	RefSeq	gene	1	649	.	+	.	ID=gene-C9F04_RS13785;Name=C9F04_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13785;old_locus_tag=C9F04_14235;partial=true;start_range=.,1
NZ_PYKF01000458.1	Protein Homology	CDS	1	649	.	+	1	ID=cds-WP_146712773.1;Parent=gene-C9F04_RS13785;Dbxref=Genbank:WP_146712773.1;Name=WP_146712773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F04_RS13785;partial=true;product=PLP-dependent aminotransferase family protein;protein_id=WP_146712773.1;start_range=.,1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	733	1059	.	-	.	ID=gene-C9F04_RS13790;Name=C9F04_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13790;old_locus_tag=C9F04_14240
NZ_PYKF01000458.1	Protein Homology	CDS	733	1059	.	-	0	ID=cds-WP_001519557.1;Parent=gene-C9F04_RS13790;Dbxref=Genbank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9F04_RS13790;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	1221	1571	.	+	.	ID=gene-C9F04_RS13795;Name=C9F04_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13795;old_locus_tag=C9F04_14245
NZ_PYKF01000458.1	Protein Homology	CDS	1221	1571	.	+	0	ID=cds-WP_000281305.1;Parent=gene-C9F04_RS13795;Dbxref=Genbank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9F04_RS13795;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	1606	2055	.	-	.	ID=gene-C9F04_RS13800;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9F04_RS13800;old_locus_tag=C9F04_14250
NZ_PYKF01000458.1	Protein Homology	CDS	1606	2055	.	-	0	ID=cds-WP_000492669.1;Parent=gene-C9F04_RS13800;Dbxref=Genbank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9F04_RS13800;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	2754	3155	.	+	.	ID=gene-C9F04_RS13810;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9F04_RS13810;old_locus_tag=C9F04_14260
NZ_PYKF01000458.1	Protein Homology	CDS	2754	3155	.	+	0	ID=cds-WP_001051100.1;Parent=gene-C9F04_RS13810;Dbxref=Genbank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9F04_RS13810;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	3245	3424	.	-	.	ID=gene-C9F04_RS13815;Name=C9F04_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13815;old_locus_tag=C9F04_14265
NZ_PYKF01000458.1	Protein Homology	CDS	3245	3424	.	-	0	ID=cds-WP_000494942.1;Parent=gene-C9F04_RS13815;Dbxref=Genbank:WP_000494942.1;Name=WP_000494942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9F04_RS13815;product=hypothetical protein;protein_id=WP_000494942.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	3503	4030	.	-	.	ID=gene-C9F04_RS13820;Name=C9F04_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13820;old_locus_tag=C9F04_14270
NZ_PYKF01000458.1	Protein Homology	CDS	3503	4030	.	-	0	ID=cds-WP_000022011.1;Parent=gene-C9F04_RS13820;Dbxref=Genbank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9F04_RS13820;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	4040	4339	.	-	.	ID=gene-C9F04_RS13825;Name=C9F04_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13825;old_locus_tag=C9F04_14275
NZ_PYKF01000458.1	Protein Homology	CDS	4040	4339	.	-	0	ID=cds-WP_000137432.1;Parent=gene-C9F04_RS13825;Dbxref=Genbank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9F04_RS13825;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	4522	4680	.	+	.	ID=gene-C9F04_RS13830;Name=C9F04_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13830;old_locus_tag=C9F04_14280
NZ_PYKF01000458.1	Protein Homology	CDS	4522	4680	.	+	0	ID=cds-WP_000508175.1;Parent=gene-C9F04_RS13830;Dbxref=Genbank:WP_000508175.1;Name=WP_000508175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9F04_RS13830;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	4780	5229	.	+	.	ID=gene-C9F04_RS13840;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9F04_RS13840;old_locus_tag=C9F04_14290
NZ_PYKF01000458.1	Protein Homology	CDS	4780	5229	.	+	0	ID=cds-WP_146712774.1;Parent=gene-C9F04_RS13840;Dbxref=Genbank:WP_146712774.1;Name=WP_146712774.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9F04_RS13840;product=peptidoglycan-binding protein LysM;protein_id=WP_146712774.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	5251	5928	.	-	.	ID=gene-C9F04_RS13845;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9F04_RS13845;old_locus_tag=C9F04_14295
NZ_PYKF01000458.1	Protein Homology	CDS	5251	5928	.	-	0	ID=cds-WP_000126152.1;Parent=gene-C9F04_RS13845;Dbxref=Genbank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9F04_RS13845;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	5970	7370	.	-	.	ID=gene-C9F04_RS13850;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9F04_RS13850;old_locus_tag=C9F04_14300
NZ_PYKF01000458.1	Protein Homology	CDS	5970	7370	.	-	0	ID=cds-WP_000531282.1;Parent=gene-C9F04_RS13850;Dbxref=Genbank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016021;gbkey=CDS;gene=gabP;go_component=integral component of membrane|0016021||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9F04_RS13850;product=GABA permease;protein_id=WP_000531282.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	7500	8783	.	-	.	ID=gene-C9F04_RS13855;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9F04_RS13855;old_locus_tag=C9F04_14305
NZ_PYKF01000458.1	Protein Homology	CDS	7500	8783	.	-	0	ID=cds-WP_001095561.1;Parent=gene-C9F04_RS13855;Dbxref=Genbank:WP_001095561.1;Name=WP_001095561.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9F04_RS13855;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095561.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	8798	10246	.	-	.	ID=gene-C9F04_RS13860;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9F04_RS13860;old_locus_tag=C9F04_14310
NZ_PYKF01000458.1	Protein Homology	CDS	8798	10246	.	-	0	ID=cds-WP_135369231.1;Parent=gene-C9F04_RS13860;Dbxref=Genbank:WP_135369231.1;Name=WP_135369231.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9F04_RS13860;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135369231.1;transl_table=11
NZ_PYKF01000458.1	RefSeq	gene	10268	11536	.	-	.	ID=gene-C9F04_RS13865;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9F04_RS13865;old_locus_tag=C9F04_14315
NZ_PYKF01000458.1	Protein Homology	CDS	10268	11536	.	-	0	ID=cds-WP_146712775.1;Parent=gene-C9F04_RS13865;Dbxref=Genbank:WP_146712775.1;Name=WP_146712775.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9F04_RS13865;product=L-2-hydroxyglutarate oxidase;protein_id=WP_146712775.1;transl_table=11
##sequence-region NZ_PYKF01000758.1 1 11547
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000758.1	RefSeq	region	1	11547	.	+	.	ID=NZ_PYKF01000758.1:1..11547;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000758.1	RefSeq	gene	1	844	.	-	.	ID=gene-C9F04_RS23565;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9F04_RS23565;old_locus_tag=C9F04_24345;partial=true;start_range=.,1
NZ_PYKF01000758.1	Protein Homology	CDS	1	844	.	-	0	ID=cds-WP_146713259.1;Parent=gene-C9F04_RS23565;Dbxref=Genbank:WP_146713259.1;Name=WP_146713259.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=C9F04_RS23565;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_146713259.1;start_range=.,1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	841	1512	.	-	.	ID=gene-C9F04_RS23570;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9F04_RS23570;old_locus_tag=C9F04_24350
NZ_PYKF01000758.1	Protein Homology	CDS	841	1512	.	-	0	ID=cds-WP_001278025.1;Parent=gene-C9F04_RS23570;Dbxref=Genbank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9F04_RS23570;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	1509	2075	.	-	.	ID=gene-C9F04_RS23575;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9F04_RS23575;old_locus_tag=C9F04_24355
NZ_PYKF01000758.1	Protein Homology	CDS	1509	2075	.	-	0	ID=cds-WP_146713260.1;Parent=gene-C9F04_RS23575;Dbxref=Genbank:WP_146713260.1;Name=WP_146713260.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9F04_RS23575;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_146713260.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	2102	3556	.	-	.	ID=gene-C9F04_RS23580;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9F04_RS23580;old_locus_tag=C9F04_24360
NZ_PYKF01000758.1	Protein Homology	CDS	2102	3556	.	-	0	ID=cds-WP_135369152.1;Parent=gene-C9F04_RS23580;Dbxref=Genbank:WP_135369152.1;Name=WP_135369152.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9F04_RS23580;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_135369152.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	3988	5946	.	+	.	ID=gene-C9F04_RS23585;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9F04_RS23585;old_locus_tag=C9F04_24370
NZ_PYKF01000758.1	Protein Homology	CDS	3988	5946	.	+	0	ID=cds-WP_146713261.1;Parent=gene-C9F04_RS23585;Dbxref=Genbank:WP_146713261.1;Name=WP_146713261.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9F04_RS23585;product=acetate--CoA ligase;protein_id=WP_146713261.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	6186	6500	.	+	.	ID=gene-C9F04_RS23590;Name=C9F04_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23590;old_locus_tag=C9F04_24380
NZ_PYKF01000758.1	Protein Homology	CDS	6186	6500	.	+	0	ID=cds-WP_000999620.1;Parent=gene-C9F04_RS23590;Dbxref=Genbank:WP_000999620.1;Name=WP_000999620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9F04_RS23590;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	pseudogene	6497	8146	.	+	.	ID=gene-C9F04_RS23595;Name=actP;gbkey=Gene;gene=actP;gene_biotype=pseudogene;locus_tag=C9F04_RS23595;old_locus_tag=C9F04_24385;pseudo=true
NZ_PYKF01000758.1	Protein Homology	CDS	6497	8146	.	+	0	ID=cds-C9F04_RS23595;Parent=gene-C9F04_RS23595;Note=internal stop;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005887;gbkey=CDS;gene=actP;go_component=integral component of plasma membrane|0005887||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9F04_RS23595;product=cation/acetate symporter ActP;pseudo=true;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	8185	8874	.	-	.	ID=gene-C9F04_RS23600;Name=C9F04_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23600;old_locus_tag=C9F04_24390
NZ_PYKF01000758.1	Protein Homology	CDS	8185	8874	.	-	0	ID=cds-WP_146713262.1;Parent=gene-C9F04_RS23600;Dbxref=Genbank:WP_146713262.1;Name=WP_146713262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9F04_RS23600;product=LrgB family protein;protein_id=WP_146713262.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	8867	9277	.	-	.	ID=gene-C9F04_RS23605;Name=C9F04_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23605;old_locus_tag=C9F04_24395
NZ_PYKF01000758.1	Protein Homology	CDS	8867	9277	.	-	0	ID=cds-WP_000257347.1;Parent=gene-C9F04_RS23605;Dbxref=Genbank:WP_000257347.1;Name=WP_000257347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9F04_RS23605;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	9381	10268	.	+	.	ID=gene-C9F04_RS23610;Name=C9F04_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23610;old_locus_tag=C9F04_24400
NZ_PYKF01000758.1	Protein Homology	CDS	9381	10268	.	+	0	ID=cds-WP_000354963.1;Parent=gene-C9F04_RS23610;Dbxref=Genbank:WP_000354963.1;Name=WP_000354963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9F04_RS23610;product=LysR family transcriptional regulator;protein_id=WP_000354963.1;transl_table=11
NZ_PYKF01000758.1	RefSeq	gene	10363	11547	.	-	.	ID=gene-C9F04_RS23615;Name=C9F04_RS23615;end_range=11547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23615;old_locus_tag=C9F04_24405;partial=true
NZ_PYKF01000758.1	Protein Homology	CDS	10363	11547	.	-	0	ID=cds-WP_146713263.1;Parent=gene-C9F04_RS23615;Dbxref=Genbank:WP_146713263.1;Name=WP_146713263.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;end_range=11547,.;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9F04_RS23615;partial=true;product=Na+/H+ antiporter;protein_id=WP_146713263.1;transl_table=11
##sequence-region NZ_PYKF01000737.1 1 11522
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000737.1	RefSeq	region	1	11522	.	+	.	ID=NZ_PYKF01000737.1:1..11522;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000737.1	RefSeq	gene	1	393	.	-	.	ID=gene-C9F04_RS22865;Name=C9F04_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22865;old_locus_tag=C9F04_23630;partial=true;start_range=.,1
NZ_PYKF01000737.1	Protein Homology	CDS	1	393	.	-	0	ID=cds-WP_146713223.1;Parent=gene-C9F04_RS22865;Dbxref=Genbank:WP_146713223.1;Name=WP_146713223.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9F04_RS22865;partial=true;product=MFS transporter;protein_id=WP_146713223.1;start_range=.,1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	565	3705	.	-	.	ID=gene-C9F04_RS22870;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9F04_RS22870;old_locus_tag=C9F04_23635
NZ_PYKF01000737.1	Protein Homology	CDS	565	3705	.	-	0	ID=cds-WP_146713224.1;Parent=gene-C9F04_RS22870;Dbxref=Genbank:WP_146713224.1;Name=WP_146713224.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F04_RS22870;product=exonuclease subunit SbcC;protein_id=WP_146713224.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	3702	4904	.	-	.	ID=gene-C9F04_RS22875;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9F04_RS22875;old_locus_tag=C9F04_23640
NZ_PYKF01000737.1	Protein Homology	CDS	3702	4904	.	-	0	ID=cds-WP_135369266.1;Parent=gene-C9F04_RS22875;Dbxref=Genbank:WP_135369266.1;Name=WP_135369266.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F04_RS22875;product=exonuclease subunit SbcD;protein_id=WP_135369266.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	5119	5808	.	+	.	ID=gene-C9F04_RS22880;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9F04_RS22880;old_locus_tag=C9F04_23645
NZ_PYKF01000737.1	Protein Homology	CDS	5119	5808	.	+	0	ID=cds-WP_000113918.1;Parent=gene-C9F04_RS22880;Dbxref=Genbank:WP_000113918.1;Name=WP_000113918.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9F04_RS22880;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113918.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	5878	7173	.	+	.	ID=gene-C9F04_RS22885;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9F04_RS22885;old_locus_tag=C9F04_23650
NZ_PYKF01000737.1	Protein Homology	CDS	5878	7173	.	+	0	ID=cds-WP_000893642.1;Parent=gene-C9F04_RS22885;Dbxref=Genbank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016021;gbkey=CDS;gene=phoR;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9F04_RS22885;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	7582	8901	.	+	.	ID=gene-C9F04_RS22890;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9F04_RS22890;old_locus_tag=C9F04_23655
NZ_PYKF01000737.1	Protein Homology	CDS	7582	8901	.	+	0	ID=cds-WP_000149625.1;Parent=gene-C9F04_RS22890;Dbxref=Genbank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9F04_RS22890;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	8976	10346	.	+	.	ID=gene-C9F04_RS22895;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9F04_RS22895;old_locus_tag=C9F04_23660
NZ_PYKF01000737.1	Protein Homology	CDS	8976	10346	.	+	0	ID=cds-WP_146713225.1;Parent=gene-C9F04_RS22895;Dbxref=Genbank:WP_146713225.1;Name=WP_146713225.1;Ontology_term=GO:0006865,GO:0055085,GO:0016021;gbkey=CDS;gene=proY;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9F04_RS22895;product=proline-specific permease ProY;protein_id=WP_146713225.1;transl_table=11
NZ_PYKF01000737.1	RefSeq	gene	10508	11522	.	+	.	ID=gene-C9F04_RS22900;Name=C9F04_RS22900;end_range=11522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22900;old_locus_tag=C9F04_23665;partial=true
NZ_PYKF01000737.1	Protein Homology	CDS	10508	11522	.	+	0	ID=cds-WP_186799083.1;Parent=gene-C9F04_RS22900;Dbxref=Genbank:WP_186799083.1;Name=WP_186799083.1;Ontology_term=GO:0005975,GO:0004553;end_range=11522,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152019.1;locus_tag=C9F04_RS22900;partial=true;product=alpha amylase N-terminal ig-like domain-containing protein;protein_id=WP_186799083.1;transl_table=11
##sequence-region NZ_PYKF01000123.1 1 11462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000123.1	RefSeq	region	1	11462	.	+	.	ID=NZ_PYKF01000123.1:1..11462;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000123.1	RefSeq	gene	1	158	.	-	.	ID=gene-C9F04_RS02365;Name=C9F04_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02365;old_locus_tag=C9F04_02445;partial=true;start_range=.,1
NZ_PYKF01000123.1	Protein Homology	CDS	1	158	.	-	0	ID=cds-WP_186798983.1;Parent=gene-C9F04_RS02365;Dbxref=Genbank:WP_186798983.1;Name=WP_186798983.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9F04_RS02365;partial=true;product=LysE family transporter;protein_id=WP_186798983.1;start_range=.,1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	358	1218	.	-	.	ID=gene-C9F04_RS02370;Name=C9F04_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02370;old_locus_tag=C9F04_02450
NZ_PYKF01000123.1	Protein Homology	CDS	358	1218	.	-	0	ID=cds-WP_000389833.1;Parent=gene-C9F04_RS02370;Dbxref=Genbank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9F04_RS02370;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	1445	2524	.	-	.	ID=gene-C9F04_RS02375;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9F04_RS02375;old_locus_tag=C9F04_02455
NZ_PYKF01000123.1	Protein Homology	CDS	1445	2524	.	-	0	ID=cds-WP_146712234.1;Parent=gene-C9F04_RS02375;Dbxref=Genbank:WP_146712234.1;Name=WP_146712234.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9F04_RS02375;product=class II fructose-bisphosphate aldolase;protein_id=WP_146712234.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	2626	3789	.	-	.	ID=gene-C9F04_RS02380;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9F04_RS02380;old_locus_tag=C9F04_02460
NZ_PYKF01000123.1	Protein Homology	CDS	2626	3789	.	-	0	ID=cds-WP_000111274.1;Parent=gene-C9F04_RS02380;Dbxref=Genbank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9F04_RS02380;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	3811	4857	.	-	.	ID=gene-C9F04_RS02385;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9F04_RS02385;old_locus_tag=C9F04_02465
NZ_PYKF01000123.1	Protein Homology	CDS	3811	4857	.	-	0	ID=cds-WP_000218338.1;Parent=gene-C9F04_RS02385;Dbxref=Genbank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9F04_RS02385;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	5231	5656	.	+	.	ID=gene-C9F04_RS02390;Name=C9F04_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02390;old_locus_tag=C9F04_02475
NZ_PYKF01000123.1	Protein Homology	CDS	5231	5656	.	+	0	ID=cds-WP_000218567.1;Parent=gene-C9F04_RS02390;Dbxref=Genbank:WP_000218567.1;Name=WP_000218567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9F04_RS02390;product=DNA-binding protein;protein_id=WP_000218567.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	pseudogene	5682	6257	.	+	.	ID=gene-C9F04_RS02395;Name=C9F04_RS02395;end_range=6257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02395;old_locus_tag=C9F04_02480;partial=true;pseudo=true
NZ_PYKF01000123.1	Protein Homology	CDS	5682	6257	.	+	0	ID=cds-C9F04_RS02395;Parent=gene-C9F04_RS02395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9F04_RS02395;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	6261	6968	.	+	.	ID=gene-C9F04_RS02400;Name=C9F04_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02400;old_locus_tag=C9F04_02485
NZ_PYKF01000123.1	Protein Homology	CDS	6261	6968	.	+	0	ID=cds-WP_146712236.1;Parent=gene-C9F04_RS02400;Dbxref=Genbank:WP_146712236.1;Name=WP_146712236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9F04_RS02400;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_146712236.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	6956	7633	.	+	.	ID=gene-C9F04_RS02405;Name=C9F04_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02405;old_locus_tag=C9F04_02490
NZ_PYKF01000123.1	Protein Homology	CDS	6956	7633	.	+	0	ID=cds-WP_001517914.1;Parent=gene-C9F04_RS02405;Dbxref=Genbank:WP_001517914.1;Name=WP_001517914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9F04_RS02405;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	7627	8283	.	+	.	ID=gene-C9F04_RS02410;Name=C9F04_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02410;old_locus_tag=C9F04_02495
NZ_PYKF01000123.1	Protein Homology	CDS	7627	8283	.	+	0	ID=cds-WP_023244889.1;Parent=gene-C9F04_RS02410;Dbxref=Genbank:WP_023244889.1;Name=WP_023244889.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9F04_RS02410;product=ATP-binding cassette domain-containing protein;protein_id=WP_023244889.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	8327	10318	.	-	.	ID=gene-C9F04_RS02415;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9F04_RS02415;old_locus_tag=C9F04_02500
NZ_PYKF01000123.1	Protein Homology	CDS	8327	10318	.	-	0	ID=cds-WP_146712235.1;Parent=gene-C9F04_RS02415;Dbxref=Genbank:WP_146712235.1;Name=WP_146712235.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9F04_RS02415;product=transketolase;protein_id=WP_146712235.1;transl_table=11
NZ_PYKF01000123.1	RefSeq	gene	10594	11352	.	+	.	ID=gene-C9F04_RS02420;Name=C9F04_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02420;old_locus_tag=C9F04_02505
NZ_PYKF01000123.1	Protein Homology	CDS	10594	11352	.	+	0	ID=cds-WP_000701824.1;Parent=gene-C9F04_RS02420;Dbxref=Genbank:WP_000701824.1;Name=WP_000701824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9F04_RS02420;product=M48 family metallopeptidase;protein_id=WP_000701824.1;transl_table=11
##sequence-region NZ_PYKF01000759.1 1 11439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000759.1	RefSeq	region	1	11439	.	+	.	ID=NZ_PYKF01000759.1:1..11439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000759.1	RefSeq	pseudogene	85	1590	.	-	.	ID=gene-C9F04_RS23620;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=pseudogene;locus_tag=C9F04_RS23620;old_locus_tag=C9F04_24410;partial=true;pseudo=true;start_range=.,85
NZ_PYKF01000759.1	Protein Homology	CDS	85	1590	.	-	0	ID=cds-C9F04_RS23620;Parent=gene-C9F04_RS23620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9F04_RS23620;partial=true;product=long-chain-fatty-acid--CoA ligase FadD;pseudo=true;start_range=.,85;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	1795	2376	.	-	.	ID=gene-C9F04_RS23625;Name=C9F04_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23625;old_locus_tag=C9F04_24420
NZ_PYKF01000759.1	Protein Homology	CDS	1795	2376	.	-	0	ID=cds-WP_135369661.1;Parent=gene-C9F04_RS23625;Dbxref=Genbank:WP_135369661.1;Name=WP_135369661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9F04_RS23625;product=Slp family lipoprotein;protein_id=WP_135369661.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	2448	3143	.	-	.	ID=gene-C9F04_RS23630;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9F04_RS23630;old_locus_tag=C9F04_24425
NZ_PYKF01000759.1	Protein Homology	CDS	2448	3143	.	-	0	ID=cds-WP_001221017.1;Parent=gene-C9F04_RS23630;Dbxref=Genbank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9F04_RS23630;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	3201	5111	.	-	.	ID=gene-C9F04_RS23635;Name=C9F04_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23635;old_locus_tag=C9F04_24430
NZ_PYKF01000759.1	Protein Homology	CDS	3201	5111	.	-	0	ID=cds-WP_146713264.1;Parent=gene-C9F04_RS23635;Dbxref=Genbank:WP_146713264.1;Name=WP_146713264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9F04_RS23635;product=ATP-dependent DNA helicase;protein_id=WP_146713264.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	5242	5586	.	+	.	ID=gene-C9F04_RS23640;Name=C9F04_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23640;old_locus_tag=C9F04_24435
NZ_PYKF01000759.1	Protein Homology	CDS	5242	5586	.	+	0	ID=cds-WP_000029550.1;Parent=gene-C9F04_RS23640;Dbxref=Genbank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9F04_RS23640;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	5592	5771	.	-	.	ID=gene-C9F04_RS23645;Name=C9F04_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23645;old_locus_tag=C9F04_24440
NZ_PYKF01000759.1	Protein Homology	CDS	5592	5771	.	-	0	ID=cds-WP_000457328.1;Parent=gene-C9F04_RS23645;Dbxref=Genbank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9F04_RS23645;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	5852	7216	.	+	.	ID=gene-C9F04_RS23650;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F04_RS23650;old_locus_tag=C9F04_24445
NZ_PYKF01000759.1	Protein Homology	CDS	5852	7216	.	+	0	ID=cds-WP_079980658.1;Parent=gene-C9F04_RS23650;Dbxref=Genbank:WP_079980658.1;Name=WP_079980658.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9F04_RS23650;product=aminodeoxychorismate synthase component 1;protein_id=WP_079980658.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	7220	7798	.	+	.	ID=gene-C9F04_RS23655;Name=C9F04_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23655;old_locus_tag=C9F04_24450
NZ_PYKF01000759.1	Protein Homology	CDS	7220	7798	.	+	0	ID=cds-WP_000381544.1;Parent=gene-C9F04_RS23655;Dbxref=Genbank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9F04_RS23655;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	8062	9426	.	+	.	ID=gene-C9F04_RS23660;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9F04_RS23660;old_locus_tag=C9F04_24455
NZ_PYKF01000759.1	Protein Homology	CDS	8062	9426	.	+	0	ID=cds-WP_000624277.1;Parent=gene-C9F04_RS23660;Dbxref=Genbank:WP_000624277.1;Name=WP_000624277.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9F04_RS23660;product=L-serine ammonia-lyase;protein_id=WP_000624277.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	gene	9564	11165	.	+	.	ID=gene-C9F04_RS23665;Name=C9F04_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23665;old_locus_tag=C9F04_24460
NZ_PYKF01000759.1	Protein Homology	CDS	9564	11165	.	+	0	ID=cds-WP_001192535.1;Parent=gene-C9F04_RS23665;Dbxref=Genbank:WP_001192535.1;Name=WP_001192535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9F04_RS23665;product=cyclic diguanylate phosphodiesterase;protein_id=WP_001192535.1;transl_table=11
NZ_PYKF01000759.1	RefSeq	pseudogene	11187	11439	.	-	.	ID=gene-C9F04_RS23670;Name=C9F04_RS23670;end_range=11439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23670;old_locus_tag=C9F04_24465;partial=true;pseudo=true
NZ_PYKF01000759.1	Protein Homology	CDS	11187	11439	.	-	1	ID=cds-C9F04_RS23670;Parent=gene-C9F04_RS23670;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9F04_RS23670;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000574.1 1 11335
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000574.1	RefSeq	region	1	11335	.	+	.	ID=NZ_PYKF01000574.1:1..11335;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000574.1	RefSeq	pseudogene	1	898	.	+	.	ID=gene-C9F04_RS17115;Name=C9F04_RS17115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17115;old_locus_tag=C9F04_17665;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000574.1	Protein Homology	CDS	1	898	.	+	1	ID=cds-C9F04_RS17115;Parent=gene-C9F04_RS17115;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F04_RS17115;partial=true;product=type VI secretion system baseplate subunit TssF;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000574.1	RefSeq	pseudogene	955	1889	.	+	.	ID=gene-C9F04_RS17120;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=C9F04_RS17120;old_locus_tag=C9F04_17670;pseudo=true
NZ_PYKF01000574.1	Protein Homology	CDS	955	1889	.	+	0	ID=cds-C9F04_RS17120;Parent=gene-C9F04_RS17120;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF018675.2;locus_tag=C9F04_RS17120;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	1900	2955	.	+	.	ID=gene-C9F04_RS17125;Name=C9F04_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17125;old_locus_tag=C9F04_17675
NZ_PYKF01000574.1	Protein Homology	CDS	1900	2955	.	+	0	ID=cds-WP_000367627.1;Parent=gene-C9F04_RS17125;Dbxref=Genbank:WP_000367627.1;Name=WP_000367627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9F04_RS17125;product=ImpA family type VI secretion system protein;protein_id=WP_000367627.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	3276	3352	.	-	.	ID=gene-C9F04_RS17130;Name=C9F04_RS17130;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS17130;old_locus_tag=C9F04_17680
NZ_PYKF01000574.1	tRNAscan-SE	tRNA	3276	3352	.	-	.	ID=rna-C9F04_RS17130;Parent=gene-C9F04_RS17130;anticodon=(pos:complement(3316..3318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17130;product=tRNA-Asp
NZ_PYKF01000574.1	tRNAscan-SE	exon	3276	3352	.	-	.	ID=exon-C9F04_RS17130-1;Parent=rna-C9F04_RS17130;anticodon=(pos:complement(3316..3318));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17130;product=tRNA-Asp
NZ_PYKF01000574.1	RefSeq	gene	3486	4217	.	-	.	ID=gene-C9F04_RS17135;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9F04_RS17135;old_locus_tag=C9F04_17685
NZ_PYKF01000574.1	Protein Homology	CDS	3486	4217	.	-	0	ID=cds-WP_146712928.1;Parent=gene-C9F04_RS17135;Dbxref=Genbank:WP_146712928.1;Name=WP_146712928.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9F04_RS17135;product=DNA polymerase III subunit epsilon;protein_id=WP_146712928.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	4281	4748	.	+	.	ID=gene-C9F04_RS17140;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9F04_RS17140;old_locus_tag=C9F04_17690
NZ_PYKF01000574.1	Protein Homology	CDS	4281	4748	.	+	0	ID=cds-WP_000917872.1;Parent=gene-C9F04_RS17140;Dbxref=Genbank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9F04_RS17140;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	4745	5467	.	-	.	ID=gene-C9F04_RS17145;Name=C9F04_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17145;old_locus_tag=C9F04_17695
NZ_PYKF01000574.1	Protein Homology	CDS	4745	5467	.	-	0	ID=cds-WP_000801238.1;Parent=gene-C9F04_RS17145;Dbxref=Genbank:WP_000801238.1;Name=WP_000801238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9F04_RS17145;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	5502	6257	.	+	.	ID=gene-C9F04_RS17150;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9F04_RS17150;old_locus_tag=C9F04_17700
NZ_PYKF01000574.1	Protein Homology	CDS	5502	6257	.	+	0	ID=cds-WP_001052780.1;Parent=gene-C9F04_RS17150;Dbxref=Genbank:WP_001052780.1;Name=WP_001052780.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9F04_RS17150;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052780.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	6329	7696	.	+	.	ID=gene-C9F04_RS17155;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9F04_RS17155;old_locus_tag=C9F04_17705
NZ_PYKF01000574.1	Protein Homology	CDS	6329	7696	.	+	0	ID=cds-WP_000644706.1;Parent=gene-C9F04_RS17155;Dbxref=Genbank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9F04_RS17155;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	7752	8522	.	-	.	ID=gene-C9F04_RS17160;Name=C9F04_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17160;old_locus_tag=C9F04_17710
NZ_PYKF01000574.1	Protein Homology	CDS	7752	8522	.	-	0	ID=cds-WP_135369476.1;Parent=gene-C9F04_RS17160;Dbxref=Genbank:WP_135369476.1;Name=WP_135369476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9F04_RS17160;product=class I SAM-dependent methyltransferase;protein_id=WP_135369476.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	8600	9400	.	-	.	ID=gene-C9F04_RS17165;Name=C9F04_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17165;old_locus_tag=C9F04_17715
NZ_PYKF01000574.1	Protein Homology	CDS	8600	9400	.	-	0	ID=cds-WP_001230970.1;Parent=gene-C9F04_RS17165;Dbxref=Genbank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9F04_RS17165;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	9532	10707	.	-	.	ID=gene-C9F04_RS17170;Name=C9F04_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17170;old_locus_tag=C9F04_17720
NZ_PYKF01000574.1	Protein Homology	CDS	9532	10707	.	-	0	ID=cds-WP_135369477.1;Parent=gene-C9F04_RS17170;Dbxref=Genbank:WP_135369477.1;Name=WP_135369477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9F04_RS17170;product=MFS transporter;protein_id=WP_135369477.1;transl_table=11
NZ_PYKF01000574.1	RefSeq	gene	10812	11335	.	+	.	ID=gene-C9F04_RS17175;Name=C9F04_RS17175;end_range=11335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17175;old_locus_tag=C9F04_17725;partial=true
NZ_PYKF01000574.1	Protein Homology	CDS	10812	11335	.	+	0	ID=cds-WP_146712929.1;Parent=gene-C9F04_RS17175;Dbxref=Genbank:WP_146712929.1;Name=WP_146712929.1;Ontology_term=GO:0006355,GO:0003700;end_range=11335,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9F04_RS17175;partial=true;product=LysR family transcriptional regulator;protein_id=WP_146712929.1;transl_table=11
##sequence-region NZ_PYKF01000432.1 1 11302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000432.1	RefSeq	region	1	11302	.	+	.	ID=NZ_PYKF01000432.1:1..11302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000432.1	RefSeq	gene	1	317	.	-	.	ID=gene-C9F04_RS12970;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9F04_RS12970;old_locus_tag=C9F04_13395;partial=true;start_range=.,1
NZ_PYKF01000432.1	Protein Homology	CDS	1	317	.	-	0	ID=cds-WP_146712727.1;Parent=gene-C9F04_RS12970;Dbxref=Genbank:WP_146712727.1;Name=WP_146712727.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132924.1;locus_tag=C9F04_RS12970;partial=true;product=chaperone modulator CbpM;protein_id=WP_146712727.1;start_range=.,1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	317	1237	.	-	.	ID=gene-C9F04_RS12975;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9F04_RS12975;old_locus_tag=C9F04_13400
NZ_PYKF01000432.1	Protein Homology	CDS	317	1237	.	-	0	ID=cds-WP_146712728.1;Parent=gene-C9F04_RS12975;Dbxref=Genbank:WP_146712728.1;Name=WP_146712728.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9F04_RS12975;product=curved DNA-binding protein;protein_id=WP_146712728.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	1473	1835	.	+	.	ID=gene-C9F04_RS12980;Name=C9F04_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12980;old_locus_tag=C9F04_13410
NZ_PYKF01000432.1	Protein Homology	CDS	1473	1835	.	+	0	ID=cds-WP_001118902.1;Parent=gene-C9F04_RS12980;Dbxref=Genbank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9F04_RS12980;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	1884	3770	.	+	.	ID=gene-C9F04_RS12985;Name=C9F04_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12985;old_locus_tag=C9F04_13415
NZ_PYKF01000432.1	Protein Homology	CDS	1884	3770	.	+	0	ID=cds-WP_146712729.1;Parent=gene-C9F04_RS12985;Dbxref=Genbank:WP_146712729.1;Name=WP_146712729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9F04_RS12985;product=protein-disulfide reductase DsbD family protein;protein_id=WP_146712729.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	3767	4390	.	+	.	ID=gene-C9F04_RS12990;Name=C9F04_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12990;old_locus_tag=C9F04_13420
NZ_PYKF01000432.1	Protein Homology	CDS	3767	4390	.	+	0	ID=cds-WP_000876690.1;Parent=gene-C9F04_RS12990;Dbxref=Genbank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9F04_RS12990;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	4380	4886	.	+	.	ID=gene-C9F04_RS12995;Name=C9F04_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12995;old_locus_tag=C9F04_13425
NZ_PYKF01000432.1	Protein Homology	CDS	4380	4886	.	+	0	ID=cds-WP_146712730.1;Parent=gene-C9F04_RS12995;Dbxref=Genbank:WP_146712730.1;Name=WP_146712730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9F04_RS12995;product=protein disulfide oxidoreductase;protein_id=WP_146712730.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	5019	6260	.	+	.	ID=gene-C9F04_RS13000;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9F04_RS13000;old_locus_tag=C9F04_13430
NZ_PYKF01000432.1	Protein Homology	CDS	5019	6260	.	+	0	ID=cds-WP_135369384.1;Parent=gene-C9F04_RS13000;Dbxref=Genbank:WP_135369384.1;Name=WP_135369384.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9F04_RS13000;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_135369384.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	6294	6521	.	-	.	ID=gene-C9F04_RS13005;Name=C9F04_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13005;old_locus_tag=C9F04_13435
NZ_PYKF01000432.1	Protein Homology	CDS	6294	6521	.	-	0	ID=cds-WP_001143125.1;Parent=gene-C9F04_RS13005;Dbxref=Genbank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9F04_RS13005;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	6542	7138	.	-	.	ID=gene-C9F04_RS13010;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9F04_RS13010;old_locus_tag=C9F04_13440
NZ_PYKF01000432.1	Protein Homology	CDS	6542	7138	.	-	0	ID=cds-WP_146712731.1;Parent=gene-C9F04_RS13010;Dbxref=Genbank:WP_146712731.1;Name=WP_146712731.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9F04_RS13010;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_146712731.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	7523	7690	.	+	.	ID=gene-C9F04_RS13015;Name=C9F04_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13015;old_locus_tag=C9F04_13445
NZ_PYKF01000432.1	Protein Homology	CDS	7523	7690	.	+	0	ID=cds-WP_001273663.1;Parent=gene-C9F04_RS13015;Dbxref=Genbank:WP_001273663.1;Name=WP_001273663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9F04_RS13015;product=general stress protein;protein_id=WP_001273663.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	7827	8465	.	+	.	ID=gene-C9F04_RS13020;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9F04_RS13020;old_locus_tag=C9F04_13450
NZ_PYKF01000432.1	Protein Homology	CDS	7827	8465	.	+	0	ID=cds-WP_000083128.1;Parent=gene-C9F04_RS13020;Dbxref=Genbank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9F04_RS13020;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	8462	8857	.	-	.	ID=gene-C9F04_RS13025;Name=C9F04_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13025;old_locus_tag=C9F04_13455
NZ_PYKF01000432.1	Protein Homology	CDS	8462	8857	.	-	0	ID=cds-WP_000821059.1;Parent=gene-C9F04_RS13025;Dbxref=Genbank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=C9F04_RS13025;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11
NZ_PYKF01000432.1	RefSeq	gene	8916	11302	.	-	.	ID=gene-C9F04_RS13030;Name=C9F04_RS13030;end_range=11302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13030;old_locus_tag=C9F04_13460;partial=true
NZ_PYKF01000432.1	Protein Homology	CDS	8916	11302	.	-	2	ID=cds-WP_186799027.1;Parent=gene-C9F04_RS13030;Dbxref=Genbank:WP_186799027.1;Name=WP_186799027.1;Ontology_term=GO:0006562,GO:0003842;end_range=11302,.;gbkey=CDS;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9F04_RS13030;partial=true;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_186799027.1;transl_table=11
##sequence-region NZ_PYKF01000681.1 1 11281
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000681.1	RefSeq	region	1	11281	.	+	.	ID=NZ_PYKF01000681.1:1..11281;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000681.1	RefSeq	gene	1	539	.	+	.	ID=gene-C9F04_RS20985;Name=C9F04_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20985;old_locus_tag=C9F04_21660;partial=true;start_range=.,1
NZ_PYKF01000681.1	Protein Homology	CDS	1	539	.	+	2	ID=cds-WP_146713117.1;Parent=gene-C9F04_RS20985;Dbxref=Genbank:WP_146713117.1;Name=WP_146713117.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F04_RS20985;partial=true;product=IS3 family transposase;protein_id=WP_146713117.1;start_range=.,1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	1118	1330	.	+	.	ID=gene-C9F04_RS20990;Name=C9F04_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20990;old_locus_tag=C9F04_21665
NZ_PYKF01000681.1	Protein Homology	CDS	1118	1330	.	+	0	ID=cds-WP_000208509.1;Parent=gene-C9F04_RS20990;Dbxref=Genbank:WP_000208509.1;Name=WP_000208509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9F04_RS20990;product=cold-shock protein;protein_id=WP_000208509.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	1341	1529	.	+	.	ID=gene-C9F04_RS20995;Name=C9F04_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20995;old_locus_tag=C9F04_21670
NZ_PYKF01000681.1	Protein Homology	CDS	1341	1529	.	+	0	ID=cds-WP_024131109.1;Parent=gene-C9F04_RS20995;Dbxref=Genbank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=C9F04_RS20995;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	1787	2983	.	-	.	ID=gene-C9F04_RS21000;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9F04_RS21000;old_locus_tag=C9F04_21675
NZ_PYKF01000681.1	Protein Homology	CDS	1787	2983	.	-	0	ID=cds-WP_146713118.1;Parent=gene-C9F04_RS21000;Dbxref=Genbank:WP_146713118.1;Name=WP_146713118.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9F04_RS21000;product=porin OmpS1;protein_id=WP_146713118.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	3633	3944	.	+	.	ID=gene-C9F04_RS21005;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9F04_RS21005;old_locus_tag=C9F04_21680
NZ_PYKF01000681.1	Protein Homology	CDS	3633	3944	.	+	0	ID=cds-WP_076707646.1;Parent=gene-C9F04_RS21005;Dbxref=Genbank:WP_076707646.1;Name=WP_076707646.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=C9F04_RS21005;product=cell division protein DrpB;protein_id=WP_076707646.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	4024	4719	.	+	.	ID=gene-C9F04_RS21010;Name=C9F04_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21010;old_locus_tag=C9F04_21685
NZ_PYKF01000681.1	Protein Homology	CDS	4024	4719	.	+	0	ID=cds-WP_146713119.1;Parent=gene-C9F04_RS21010;Dbxref=Genbank:WP_146713119.1;Name=WP_146713119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9F04_RS21010;product=phosphohydrolase;protein_id=WP_146713119.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	4865	6223	.	+	.	ID=gene-C9F04_RS21015;Name=C9F04_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21015;old_locus_tag=C9F04_21690
NZ_PYKF01000681.1	Protein Homology	CDS	4865	6223	.	+	0	ID=cds-WP_024138101.1;Parent=gene-C9F04_RS21015;Dbxref=Genbank:WP_024138101.1;Name=WP_024138101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9F04_RS21015;product=DNA cytosine methyltransferase;protein_id=WP_024138101.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	6204	6674	.	+	.	ID=gene-C9F04_RS21020;Name=C9F04_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21020;old_locus_tag=C9F04_21695
NZ_PYKF01000681.1	Protein Homology	CDS	6204	6674	.	+	0	ID=cds-WP_146713120.1;Parent=gene-C9F04_RS21020;Dbxref=Genbank:WP_146713120.1;Name=WP_146713120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9F04_RS21020;product=very short patch repair endonuclease;protein_id=WP_146713120.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	6663	7583	.	-	.	ID=gene-C9F04_RS21025;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9F04_RS21025;old_locus_tag=C9F04_21700
NZ_PYKF01000681.1	Protein Homology	CDS	6663	7583	.	-	0	ID=cds-WP_001212263.1;Parent=gene-C9F04_RS21025;Dbxref=Genbank:WP_001212263.1;Name=WP_001212263.1;Ontology_term=GO:0016021;gbkey=CDS;gene=yedA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9F04_RS21025;product=drug/metabolite exporter YedA;protein_id=WP_001212263.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	7753	8670	.	+	.	ID=gene-C9F04_RS21030;Name=C9F04_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21030;old_locus_tag=C9F04_21705
NZ_PYKF01000681.1	Protein Homology	CDS	7753	8670	.	+	0	ID=cds-WP_085920526.1;Parent=gene-C9F04_RS21030;Dbxref=Genbank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9F04_RS21030;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	8747	8932	.	+	.	ID=gene-C9F04_RS21035;Name=C9F04_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21035;old_locus_tag=C9F04_21710
NZ_PYKF01000681.1	Protein Homology	CDS	8747	8932	.	+	0	ID=cds-WP_001521741.1;Parent=gene-C9F04_RS21035;Dbxref=Genbank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9F04_RS21035;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	gene	9097	10809	.	+	.	ID=gene-C9F04_RS21040;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9F04_RS21040;old_locus_tag=C9F04_21715
NZ_PYKF01000681.1	Protein Homology	CDS	9097	10809	.	+	0	ID=cds-WP_135369693.1;Parent=gene-C9F04_RS21040;Dbxref=Genbank:WP_135369693.1;Name=WP_135369693.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9F04_RS21040;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_135369693.1;transl_table=11
NZ_PYKF01000681.1	RefSeq	pseudogene	10788	11281	.	-	.	ID=gene-C9F04_RS21045;Name=C9F04_RS21045;end_range=11281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21045;old_locus_tag=C9F04_21720;partial=true;pseudo=true
NZ_PYKF01000681.1	Protein Homology	CDS	10788	11281	.	-	2	ID=cds-C9F04_RS21045;Parent=gene-C9F04_RS21045;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9F04_RS21045;partial=true;product=mannosyl-3-phosphoglycerate phosphatase-related protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000249.1 1 27383
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000249.1	RefSeq	region	1	27383	.	+	.	ID=NZ_PYKF01000249.1:1..27383;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000249.1	RefSeq	pseudogene	1	439	.	+	.	ID=gene-C9F04_RS06725;Name=C9F04_RS06725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06725;old_locus_tag=C9F04_06945;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000249.1	Protein Homology	CDS	1	439	.	+	1	ID=cds-C9F04_RS06725;Parent=gene-C9F04_RS06725;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046524.1;locus_tag=C9F04_RS06725;partial=true;product=anion transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	483	1403	.	-	.	ID=gene-C9F04_RS06730;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9F04_RS06730;old_locus_tag=C9F04_06950
NZ_PYKF01000249.1	Protein Homology	CDS	483	1403	.	-	0	ID=cds-WP_146712436.1;Parent=gene-C9F04_RS06730;Dbxref=Genbank:WP_146712436.1;Name=WP_146712436.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9F04_RS06730;product=L%2CD-transpeptidase;protein_id=WP_146712436.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	1623	3215	.	+	.	ID=gene-C9F04_RS06735;Name=C9F04_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06735;old_locus_tag=C9F04_06955
NZ_PYKF01000249.1	Protein Homology	CDS	1623	3215	.	+	0	ID=cds-WP_135420068.1;Parent=gene-C9F04_RS06735;Dbxref=Genbank:WP_135420068.1;Name=WP_135420068.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=C9F04_RS06735;product=ABC-F family ATPase;protein_id=WP_135420068.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	3615	4358	.	+	.	ID=gene-C9F04_RS06740;Name=C9F04_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06740;old_locus_tag=C9F04_06960
NZ_PYKF01000249.1	Protein Homology	CDS	3615	4358	.	+	0	ID=cds-WP_079961633.1;Parent=gene-C9F04_RS06740;Dbxref=Genbank:WP_079961633.1;Name=WP_079961633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=C9F04_RS06740;product=DUF4261 domain-containing protein;protein_id=WP_079961633.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	pseudogene	4387	5115	.	-	.	ID=gene-C9F04_RS06745;Name=C9F04_RS06745;end_range=5115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06745;old_locus_tag=C9F04_06965;partial=true;pseudo=true
NZ_PYKF01000249.1	Protein Homology	CDS	4387	5115	.	-	0	ID=cds-C9F04_RS06745;Parent=gene-C9F04_RS06745;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=C9F04_RS06745;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	5310	6575	.	-	.	ID=gene-C9F04_RS06750;Name=C9F04_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06750;old_locus_tag=C9F04_06975
NZ_PYKF01000249.1	Protein Homology	CDS	5310	6575	.	-	0	ID=cds-WP_001623289.1;Parent=gene-C9F04_RS06750;Dbxref=Genbank:WP_001623289.1;Name=WP_001623289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9F04_RS06750;product=DUF1479 domain-containing protein;protein_id=WP_001623289.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	6837	7646	.	+	.	ID=gene-C9F04_RS06755;Name=C9F04_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06755;old_locus_tag=C9F04_06980
NZ_PYKF01000249.1	Protein Homology	CDS	6837	7646	.	+	0	ID=cds-WP_000217910.1;Parent=gene-C9F04_RS06755;Dbxref=Genbank:WP_000217910.1;Name=WP_000217910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9F04_RS06755;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	7724	10156	.	-	.	ID=gene-C9F04_RS06760;Name=C9F04_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06760;old_locus_tag=C9F04_06985
NZ_PYKF01000249.1	Protein Homology	CDS	7724	10156	.	-	0	ID=cds-WP_146712437.1;Parent=gene-C9F04_RS06760;Dbxref=Genbank:WP_146712437.1;Name=WP_146712437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9F04_RS06760;product=glycyl radical protein;protein_id=WP_146712437.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	10162	11061	.	-	.	ID=gene-C9F04_RS06765;Name=C9F04_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06765;old_locus_tag=C9F04_06990
NZ_PYKF01000249.1	Protein Homology	CDS	10162	11061	.	-	0	ID=cds-WP_135369349.1;Parent=gene-C9F04_RS06765;Dbxref=Genbank:WP_135369349.1;Name=WP_135369349.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9F04_RS06765;product=glycyl-radical enzyme activating protein;protein_id=WP_135369349.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	11339	12088	.	-	.	ID=gene-C9F04_RS06770;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9F04_RS06770;old_locus_tag=C9F04_06995
NZ_PYKF01000249.1	Protein Homology	CDS	11339	12088	.	-	0	ID=cds-WP_001623292.1;Parent=gene-C9F04_RS06770;Dbxref=Genbank:WP_001623292.1;Name=WP_001623292.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9F04_RS06770;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_001623292.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	12088	13323	.	-	.	ID=gene-C9F04_RS06775;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9F04_RS06775;old_locus_tag=C9F04_07000
NZ_PYKF01000249.1	Protein Homology	CDS	12088	13323	.	-	0	ID=cds-WP_186799007.1;Parent=gene-C9F04_RS06775;Dbxref=Genbank:WP_186799007.1;Name=WP_186799007.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9F04_RS06775;product=molybdopterin molybdotransferase MoeA;protein_id=WP_186799007.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	13527	14468	.	+	.	ID=gene-C9F04_RS06780;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9F04_RS06780;old_locus_tag=C9F04_07005
NZ_PYKF01000249.1	Protein Homology	CDS	13527	14468	.	+	0	ID=cds-WP_146712439.1;Parent=gene-C9F04_RS06780;Dbxref=Genbank:WP_146712439.1;Name=WP_146712439.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9F04_RS06780;product=beta-aspartyl-peptidase;protein_id=WP_146712439.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	14479	16350	.	+	.	ID=gene-C9F04_RS06785;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9F04_RS06785;old_locus_tag=C9F04_07010
NZ_PYKF01000249.1	Protein Homology	CDS	14479	16350	.	+	0	ID=cds-WP_001120599.1;Parent=gene-C9F04_RS06785;Dbxref=Genbank:WP_001120599.1;Name=WP_001120599.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9F04_RS06785;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120599.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	16383	17921	.	+	.	ID=gene-C9F04_RS06790;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9F04_RS06790;old_locus_tag=C9F04_07015
NZ_PYKF01000249.1	Protein Homology	CDS	16383	17921	.	+	0	ID=cds-WP_146712440.1;Parent=gene-C9F04_RS06790;Dbxref=Genbank:WP_146712440.1;Name=WP_146712440.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9F04_RS06790;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_146712440.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	17982	18902	.	+	.	ID=gene-C9F04_RS06795;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9F04_RS06795;old_locus_tag=C9F04_07020
NZ_PYKF01000249.1	Protein Homology	CDS	17982	18902	.	+	0	ID=cds-WP_146712441.1;Parent=gene-C9F04_RS06795;Dbxref=Genbank:WP_146712441.1;Name=WP_146712441.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9F04_RS06795;product=glutathione ABC transporter permease GsiC;protein_id=WP_146712441.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	18905	19816	.	+	.	ID=gene-C9F04_RS06800;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9F04_RS06800;old_locus_tag=C9F04_07025
NZ_PYKF01000249.1	Protein Homology	CDS	18905	19816	.	+	0	ID=cds-WP_001236024.1;Parent=gene-C9F04_RS06800;Dbxref=Genbank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9F04_RS06800;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	19907	21232	.	-	.	ID=gene-C9F04_RS06805;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9F04_RS06805;old_locus_tag=C9F04_07030
NZ_PYKF01000249.1	Protein Homology	CDS	19907	21232	.	-	0	ID=cds-WP_000073317.1;Parent=gene-C9F04_RS06805;Dbxref=Genbank:WP_000073317.1;Name=WP_000073317.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9F04_RS06805;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073317.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	21463	21846	.	+	.	ID=gene-C9F04_RS06810;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9F04_RS06810;old_locus_tag=C9F04_07035
NZ_PYKF01000249.1	Protein Homology	CDS	21463	21846	.	+	0	ID=cds-WP_000259648.1;Parent=gene-C9F04_RS06810;Dbxref=Genbank:WP_000259648.1;Name=WP_000259648.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9F04_RS06810;product=biofilm formation regulator BssR;protein_id=WP_000259648.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	21965	23086	.	+	.	ID=gene-C9F04_RS06815;Name=C9F04_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06815;old_locus_tag=C9F04_07040
NZ_PYKF01000249.1	Protein Homology	CDS	21965	23086	.	+	0	ID=cds-WP_135369347.1;Parent=gene-C9F04_RS06815;Dbxref=Genbank:WP_135369347.1;Name=WP_135369347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=C9F04_RS06815;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_135369347.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	23083	23709	.	-	.	ID=gene-C9F04_RS06820;Name=C9F04_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06820;old_locus_tag=C9F04_07045
NZ_PYKF01000249.1	Protein Homology	CDS	23083	23709	.	-	0	ID=cds-WP_000631907.1;Parent=gene-C9F04_RS06820;Dbxref=Genbank:WP_000631907.1;Name=WP_000631907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9F04_RS06820;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	23953	25155	.	+	.	ID=gene-C9F04_RS06825;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9F04_RS06825;old_locus_tag=C9F04_07050
NZ_PYKF01000249.1	Protein Homology	CDS	23953	25155	.	+	0	ID=cds-WP_146712442.1;Parent=gene-C9F04_RS06825;Dbxref=Genbank:WP_146712442.1;Name=WP_146712442.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9F04_RS06825;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_146712442.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	25201	25959	.	-	.	ID=gene-C9F04_RS06830;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9F04_RS06830;old_locus_tag=C9F04_07055
NZ_PYKF01000249.1	Protein Homology	CDS	25201	25959	.	-	0	ID=cds-WP_000450106.1;Parent=gene-C9F04_RS06830;Dbxref=Genbank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9F04_RS06830;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	26031	26639	.	-	.	ID=gene-C9F04_RS06835;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9F04_RS06835;old_locus_tag=C9F04_07060
NZ_PYKF01000249.1	Protein Homology	CDS	26031	26639	.	-	0	ID=cds-WP_001531378.1;Parent=gene-C9F04_RS06835;Dbxref=Genbank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9F04_RS06835;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11
NZ_PYKF01000249.1	RefSeq	gene	26952	27383	.	+	.	ID=gene-C9F04_RS06840;Name=C9F04_RS06840;end_range=27383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06840;old_locus_tag=C9F04_07065;partial=true
NZ_PYKF01000249.1	Protein Homology	CDS	26952	27383	.	+	0	ID=cds-WP_146712443.1;Parent=gene-C9F04_RS06840;Dbxref=Genbank:WP_146712443.1;Name=WP_146712443.1;Ontology_term=GO:0055085,GO:0022857;end_range=27383,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9F04_RS06840;partial=true;product=MFS transporter;protein_id=WP_146712443.1;transl_table=11
##sequence-region NZ_PYKF01000607.1 1 11272
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000607.1	RefSeq	region	1	11272	.	+	.	ID=NZ_PYKF01000607.1:1..11272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000607.1	RefSeq	gene	1	1677	.	-	.	ID=gene-C9F04_RS18195;Name=C9F04_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18195;old_locus_tag=C9F04_18780;partial=true;start_range=.,1
NZ_PYKF01000607.1	Protein Homology	CDS	1	1677	.	-	0	ID=cds-WP_146712981.1;Parent=gene-C9F04_RS18195;Dbxref=Genbank:WP_146712981.1;Name=WP_146712981.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052938253.1;locus_tag=C9F04_RS18195;partial=true;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_146712981.1;start_range=.,1;transl_table=11
NZ_PYKF01000607.1	RefSeq	pseudogene	1850	1933	.	-	.	ID=gene-C9F04_RS27165;Name=C9F04_RS27165;end_range=1933,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27165;partial=true;pseudo=true;start_range=.,1850
NZ_PYKF01000607.1	Protein Homology	CDS	1850	1933	.	-	0	ID=cds-C9F04_RS27165;Parent=gene-C9F04_RS27165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=C9F04_RS27165;partial=true;product=phage tail protein;pseudo=true;start_range=.,1850;transl_table=11
NZ_PYKF01000607.1	RefSeq	pseudogene	1945	2292	.	+	.	ID=gene-C9F04_RS18205;Name=C9F04_RS18205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18205;old_locus_tag=C9F04_18790;partial=true;pseudo=true;start_range=.,1945
NZ_PYKF01000607.1	Protein Homology	CDS	1945	2292	.	+	0	ID=cds-C9F04_RS18205;Parent=gene-C9F04_RS18205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9F04_RS18205;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1945;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	2675	3028	.	-	.	ID=gene-C9F04_RS18210;Name=C9F04_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18210;old_locus_tag=C9F04_18805
NZ_PYKF01000607.1	Protein Homology	CDS	2675	3028	.	-	0	ID=cds-WP_000722368.1;Parent=gene-C9F04_RS18210;Dbxref=Genbank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9F04_RS18210;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	3045	3920	.	-	.	ID=gene-C9F04_RS18215;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9F04_RS18215;old_locus_tag=C9F04_18810
NZ_PYKF01000607.1	Protein Homology	CDS	3045	3920	.	-	0	ID=cds-WP_146712982.1;Parent=gene-C9F04_RS18215;Dbxref=Genbank:WP_146712982.1;Name=WP_146712982.1;Ontology_term=GO:0006825,GO:0016021;gbkey=CDS;gene=copD;go_component=integral component of membrane|0016021||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9F04_RS18215;product=copper homeostasis membrane protein CopD;protein_id=WP_146712982.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	3921	4295	.	-	.	ID=gene-C9F04_RS18220;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9F04_RS18220;old_locus_tag=C9F04_18815
NZ_PYKF01000607.1	Protein Homology	CDS	3921	4295	.	-	0	ID=cds-WP_000168393.1;Parent=gene-C9F04_RS18220;Dbxref=Genbank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9F04_RS18220;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	4433	4663	.	+	.	ID=gene-C9F04_RS18225;Name=C9F04_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18225;old_locus_tag=C9F04_18820
NZ_PYKF01000607.1	Protein Homology	CDS	4433	4663	.	+	0	ID=cds-WP_000856224.1;Parent=gene-C9F04_RS18225;Dbxref=Genbank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9F04_RS18225;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	4771	5427	.	+	.	ID=gene-C9F04_RS18230;Name=C9F04_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18230;old_locus_tag=C9F04_18825
NZ_PYKF01000607.1	Protein Homology	CDS	4771	5427	.	+	0	ID=cds-WP_000100257.1;Parent=gene-C9F04_RS18230;Dbxref=Genbank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9F04_RS18230;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	5451	6149	.	+	.	ID=gene-C9F04_RS18235;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9F04_RS18235;old_locus_tag=C9F04_18830
NZ_PYKF01000607.1	Protein Homology	CDS	5451	6149	.	+	0	ID=cds-WP_135369098.1;Parent=gene-C9F04_RS18235;Dbxref=Genbank:WP_135369098.1;Name=WP_135369098.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9F04_RS18235;product=exodeoxyribonuclease X;protein_id=WP_135369098.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	6186	8237	.	-	.	ID=gene-C9F04_RS18240;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9F04_RS18240;old_locus_tag=C9F04_18835
NZ_PYKF01000607.1	Protein Homology	CDS	6186	8237	.	-	0	ID=cds-WP_000936999.1;Parent=gene-C9F04_RS18240;Dbxref=Genbank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9F04_RS18240;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	8450	9109	.	-	.	ID=gene-C9F04_RS18245;Name=C9F04_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18245;old_locus_tag=C9F04_18840
NZ_PYKF01000607.1	Protein Homology	CDS	8450	9109	.	-	0	ID=cds-WP_000024707.1;Parent=gene-C9F04_RS18245;Dbxref=Genbank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9F04_RS18245;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	9203	9556	.	-	.	ID=gene-C9F04_RS18250;Name=C9F04_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18250;old_locus_tag=C9F04_18845
NZ_PYKF01000607.1	Protein Homology	CDS	9203	9556	.	-	0	ID=cds-WP_001042123.1;Parent=gene-C9F04_RS18250;Dbxref=Genbank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9F04_RS18250;product=hypothetical protein;protein_id=WP_001042123.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	9624	9914	.	-	.	ID=gene-C9F04_RS18255;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9F04_RS18255;old_locus_tag=C9F04_18850
NZ_PYKF01000607.1	Protein Homology	CDS	9624	9914	.	-	0	ID=cds-WP_146712983.1;Parent=gene-C9F04_RS18255;Dbxref=Genbank:WP_146712983.1;Name=WP_146712983.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9F04_RS18255;product=DNA damage-inducible protein YebG;protein_id=WP_146712983.1;transl_table=11
NZ_PYKF01000607.1	RefSeq	gene	10045	11223	.	+	.	ID=gene-C9F04_RS18260;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9F04_RS18260;old_locus_tag=C9F04_18855
NZ_PYKF01000607.1	Protein Homology	CDS	10045	11223	.	+	0	ID=cds-WP_146712984.1;Parent=gene-C9F04_RS18260;Dbxref=Genbank:WP_146712984.1;Name=WP_146712984.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9F04_RS18260;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_146712984.1;transl_table=11
##sequence-region NZ_PYKF01000692.1 1 11256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000692.1	RefSeq	region	1	11256	.	+	.	ID=NZ_PYKF01000692.1:1..11256;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000692.1	RefSeq	gene	1	912	.	+	.	ID=gene-C9F04_RS21275;Name=C9F04_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21275;old_locus_tag=C9F04_21965;partial=true;start_range=.,1
NZ_PYKF01000692.1	Protein Homology	CDS	1	912	.	+	0	ID=cds-WP_186799068.1;Parent=gene-C9F04_RS21275;Dbxref=Genbank:WP_186799068.1;Name=WP_186799068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F04_RS21275;partial=true;product=YcaO-like family protein;protein_id=WP_186799068.1;start_range=.,1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	1317	2174	.	+	.	ID=gene-C9F04_RS21280;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9F04_RS21280;old_locus_tag=C9F04_21970
NZ_PYKF01000692.1	Protein Homology	CDS	1317	2174	.	+	0	ID=cds-WP_000642539.1;Parent=gene-C9F04_RS21280;Dbxref=Genbank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9F04_RS21280;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	2234	4516	.	+	.	ID=gene-C9F04_RS21285;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F04_RS21285;old_locus_tag=C9F04_21975
NZ_PYKF01000692.1	Protein Homology	CDS	2234	4516	.	+	0	ID=cds-WP_001292799.1;Parent=gene-C9F04_RS21285;Dbxref=Genbank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9F04_RS21285;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	4588	5541	.	-	.	ID=gene-C9F04_RS21290;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9F04_RS21290;old_locus_tag=C9F04_21980
NZ_PYKF01000692.1	Protein Homology	CDS	4588	5541	.	-	0	ID=cds-WP_135369409.1;Parent=gene-C9F04_RS21290;Dbxref=Genbank:WP_135369409.1;Name=WP_135369409.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145561.1;locus_tag=C9F04_RS21290;product=type III secretion system effector SopD2;protein_id=WP_135369409.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	pseudogene	5672	5997	.	+	.	ID=gene-C9F04_RS27195;Name=C9F04_RS27195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27195;pseudo=true
NZ_PYKF01000692.1	Protein Homology	CDS	5672	5997	.	+	0	ID=cds-C9F04_RS27195;Parent=gene-C9F04_RS27195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9F04_RS27195;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	6116	6913	.	+	.	ID=gene-C9F04_RS21295;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9F04_RS21295;old_locus_tag=C9F04_21985
NZ_PYKF01000692.1	Protein Homology	CDS	6116	6913	.	+	0	ID=cds-WP_000067928.1;Parent=gene-C9F04_RS21295;Dbxref=Genbank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9F04_RS21295;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	7206	8627	.	-	.	ID=gene-C9F04_RS21300;Name=C9F04_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21300;old_locus_tag=C9F04_21990
NZ_PYKF01000692.1	Protein Homology	CDS	7206	8627	.	-	0	ID=cds-WP_135369408.1;Parent=gene-C9F04_RS21300;Dbxref=Genbank:WP_135369408.1;Name=WP_135369408.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9F04_RS21300;product=amino acid permease;protein_id=WP_135369408.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	8845	9993	.	-	.	ID=gene-C9F04_RS21305;Name=C9F04_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21305;old_locus_tag=C9F04_21995
NZ_PYKF01000692.1	Protein Homology	CDS	8845	9993	.	-	0	ID=cds-WP_000109274.1;Parent=gene-C9F04_RS21305;Dbxref=Genbank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F04_RS21305;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11
NZ_PYKF01000692.1	RefSeq	gene	10343	11206	.	-	.	ID=gene-C9F04_RS21310;Name=C9F04_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21310;old_locus_tag=C9F04_22000
NZ_PYKF01000692.1	Protein Homology	CDS	10343	11206	.	-	0	ID=cds-WP_000534681.1;Parent=gene-C9F04_RS21310;Dbxref=Genbank:WP_000534681.1;Name=WP_000534681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9F04_RS21310;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_000534681.1;transl_table=11
##sequence-region NZ_PYKF01000670.1 1 11210
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000670.1	RefSeq	region	1	11210	.	+	.	ID=NZ_PYKF01000670.1:1..11210;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000670.1	RefSeq	gene	1	416	.	+	.	ID=gene-C9F04_RS20475;Name=C9F04_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20475;old_locus_tag=C9F04_21140;partial=true;start_range=.,1
NZ_PYKF01000670.1	Protein Homology	CDS	1	416	.	+	2	ID=cds-WP_261771419.1;Parent=gene-C9F04_RS20475;Dbxref=Genbank:WP_261771419.1;Name=WP_261771419.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308983.1;locus_tag=C9F04_RS20475;partial=true;product=beta-eliminating lyase-related protein;protein_id=WP_261771419.1;start_range=.,1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	427	1860	.	+	.	ID=gene-C9F04_RS20480;Name=C9F04_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20480;old_locus_tag=C9F04_21145
NZ_PYKF01000670.1	Protein Homology	CDS	427	1860	.	+	0	ID=cds-WP_146713094.1;Parent=gene-C9F04_RS20480;Dbxref=Genbank:WP_146713094.1;Name=WP_146713094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9F04_RS20480;product=SDR family oxidoreductase;protein_id=WP_146713094.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	1956	2969	.	+	.	ID=gene-C9F04_RS20485;Name=C9F04_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20485;old_locus_tag=C9F04_21150
NZ_PYKF01000670.1	Protein Homology	CDS	1956	2969	.	+	0	ID=cds-WP_146713095.1;Parent=gene-C9F04_RS20485;Dbxref=Genbank:WP_146713095.1;Name=WP_146713095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9F04_RS20485;product=NAD(P)-dependent oxidoreductase;protein_id=WP_146713095.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	2966	3796	.	-	.	ID=gene-C9F04_RS20490;Name=C9F04_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20490;old_locus_tag=C9F04_21155
NZ_PYKF01000670.1	Protein Homology	CDS	2966	3796	.	-	0	ID=cds-WP_000645850.1;Parent=gene-C9F04_RS20490;Dbxref=Genbank:WP_000645850.1;Name=WP_000645850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9F04_RS20490;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	3793	4116	.	-	.	ID=gene-C9F04_RS20495;Name=C9F04_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20495;old_locus_tag=C9F04_21160
NZ_PYKF01000670.1	Protein Homology	CDS	3793	4116	.	-	0	ID=cds-WP_143551697.1;Parent=gene-C9F04_RS20495;Dbxref=Genbank:WP_143551697.1;Name=WP_143551697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9F04_RS20495;product=heavy metal-binding domain-containing protein;protein_id=WP_143551697.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	4244	4759	.	+	.	ID=gene-C9F04_RS20500;Name=C9F04_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20500;old_locus_tag=C9F04_21165
NZ_PYKF01000670.1	Protein Homology	CDS	4244	4759	.	+	0	ID=cds-WP_001270724.1;Parent=gene-C9F04_RS20500;Dbxref=Genbank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9F04_RS20500;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	4989	5717	.	+	.	ID=gene-C9F04_RS20505;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9F04_RS20505;old_locus_tag=C9F04_21170
NZ_PYKF01000670.1	Protein Homology	CDS	4989	5717	.	+	0	ID=cds-WP_000027186.1;Parent=gene-C9F04_RS20505;Dbxref=Genbank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9F04_RS20505;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	5735	6466	.	+	.	ID=gene-C9F04_RS20510;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9F04_RS20510;old_locus_tag=C9F04_21175
NZ_PYKF01000670.1	Protein Homology	CDS	5735	6466	.	+	0	ID=cds-WP_146713096.1;Parent=gene-C9F04_RS20510;Dbxref=Genbank:WP_146713096.1;Name=WP_146713096.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9F04_RS20510;product=arginine ABC transporter substrate-binding protein;protein_id=WP_146713096.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	6473	7189	.	+	.	ID=gene-C9F04_RS20515;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9F04_RS20515;old_locus_tag=C9F04_21180
NZ_PYKF01000670.1	Protein Homology	CDS	6473	7189	.	+	0	ID=cds-WP_146713097.1;Parent=gene-C9F04_RS20515;Dbxref=Genbank:WP_146713097.1;Name=WP_146713097.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artQ;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9F04_RS20515;product=arginine ABC transporter permease ArtQ;protein_id=WP_146713097.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	7189	7857	.	+	.	ID=gene-C9F04_RS20520;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9F04_RS20520;old_locus_tag=C9F04_21185
NZ_PYKF01000670.1	Protein Homology	CDS	7189	7857	.	+	0	ID=cds-WP_000895396.1;Parent=gene-C9F04_RS20520;Dbxref=Genbank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artM;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9F04_RS20520;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	8094	8825	.	+	.	ID=gene-C9F04_RS20525;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9F04_RS20525;old_locus_tag=C9F04_21190
NZ_PYKF01000670.1	Protein Homology	CDS	8094	8825	.	+	0	ID=cds-WP_000737538.1;Parent=gene-C9F04_RS20525;Dbxref=Genbank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9F04_RS20525;product=ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	9044	10531	.	-	.	ID=gene-C9F04_RS20530;Name=C9F04_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20530;old_locus_tag=C9F04_21200
NZ_PYKF01000670.1	Protein Homology	CDS	9044	10531	.	-	0	ID=cds-WP_000644018.1;Parent=gene-C9F04_RS20530;Dbxref=Genbank:WP_000644018.1;Name=WP_000644018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9F04_RS20530;product=sulfatase;protein_id=WP_000644018.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	gene	10541	10861	.	-	.	ID=gene-C9F04_RS20535;Name=C9F04_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20535;old_locus_tag=C9F04_21205
NZ_PYKF01000670.1	Protein Homology	CDS	10541	10861	.	-	0	ID=cds-WP_000655399.1;Parent=gene-C9F04_RS20535;Dbxref=Genbank:WP_000655399.1;Name=WP_000655399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9F04_RS20535;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11
NZ_PYKF01000670.1	RefSeq	pseudogene	10891	11210	.	-	.	ID=gene-C9F04_RS20540;Name=C9F04_RS20540;end_range=11210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20540;old_locus_tag=C9F04_21210;partial=true;pseudo=true
NZ_PYKF01000670.1	Protein Homology	CDS	10891	11210	.	-	2	ID=cds-C9F04_RS20540;Parent=gene-C9F04_RS20540;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9F04_RS20540;partial=true;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000362.1 1 11133
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000362.1	RefSeq	region	1	11133	.	+	.	ID=NZ_PYKF01000362.1:1..11133;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000362.1	RefSeq	gene	1	325	.	+	.	ID=gene-C9F04_RS10645;Name=C9F04_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10645;old_locus_tag=C9F04_10980;partial=true;start_range=.,1
NZ_PYKF01000362.1	Protein Homology	CDS	1	325	.	+	1	ID=cds-WP_146712613.1;Parent=gene-C9F04_RS10645;Dbxref=Genbank:WP_146712613.1;Name=WP_146712613.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F04_RS10645;partial=true;product=ABC transporter permease subunit;protein_id=WP_146712613.1;start_range=.,1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	322	1167	.	+	.	ID=gene-C9F04_RS10650;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9F04_RS10650;old_locus_tag=C9F04_10985
NZ_PYKF01000362.1	Protein Homology	CDS	322	1167	.	+	0	ID=cds-WP_000572196.1;Parent=gene-C9F04_RS10650;Dbxref=Genbank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005887,GO:0055052;gbkey=CDS;gene=ugpE;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9F04_RS10650;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	1169	2239	.	+	.	ID=gene-C9F04_RS10655;Name=C9F04_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10655;old_locus_tag=C9F04_10990
NZ_PYKF01000362.1	Protein Homology	CDS	1169	2239	.	+	0	ID=cds-WP_000907838.1;Parent=gene-C9F04_RS10655;Dbxref=Genbank:WP_000907838.1;Name=WP_000907838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9F04_RS10655;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907838.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	2236	2976	.	+	.	ID=gene-C9F04_RS10660;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9F04_RS10660;old_locus_tag=C9F04_10995
NZ_PYKF01000362.1	Protein Homology	CDS	2236	2976	.	+	0	ID=cds-WP_000073542.1;Parent=gene-C9F04_RS10660;Dbxref=Genbank:WP_000073542.1;Name=WP_000073542.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9F04_RS10660;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073542.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	2989	3405	.	-	.	ID=gene-C9F04_RS10665;Name=C9F04_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10665;old_locus_tag=C9F04_11000
NZ_PYKF01000362.1	Protein Homology	CDS	2989	3405	.	-	0	ID=cds-WP_000826042.1;Parent=gene-C9F04_RS10665;Dbxref=Genbank:WP_000826042.1;Name=WP_000826042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9F04_RS10665;product=DUF2756 family protein;protein_id=WP_000826042.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	3531	5273	.	+	.	ID=gene-C9F04_RS10670;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F04_RS10670;old_locus_tag=C9F04_11005
NZ_PYKF01000362.1	Protein Homology	CDS	3531	5273	.	+	0	ID=cds-WP_146712614.1;Parent=gene-C9F04_RS10670;Dbxref=Genbank:WP_146712614.1;Name=WP_146712614.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9F04_RS10670;product=gamma-glutamyltransferase;protein_id=WP_146712614.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	5318	6352	.	-	.	ID=gene-C9F04_RS10675;Name=C9F04_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10675;old_locus_tag=C9F04_11010
NZ_PYKF01000362.1	Protein Homology	CDS	5318	6352	.	-	0	ID=cds-WP_146712615.1;Parent=gene-C9F04_RS10675;Dbxref=Genbank:WP_146712615.1;Name=WP_146712615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9F04_RS10675;product=phosphotriesterase;protein_id=WP_146712615.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	6349	7320	.	-	.	ID=gene-C9F04_RS10680;Name=C9F04_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10680;old_locus_tag=C9F04_11015
NZ_PYKF01000362.1	Protein Homology	CDS	6349	7320	.	-	0	ID=cds-WP_146712616.1;Parent=gene-C9F04_RS10680;Dbxref=Genbank:WP_146712616.1;Name=WP_146712616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9F04_RS10680;product=DMT family transporter;protein_id=WP_146712616.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	7374	8135	.	-	.	ID=gene-C9F04_RS10685;Name=C9F04_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10685;old_locus_tag=C9F04_11020
NZ_PYKF01000362.1	Protein Homology	CDS	7374	8135	.	-	0	ID=cds-WP_001066509.1;Parent=gene-C9F04_RS10685;Dbxref=Genbank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9F04_RS10685;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	8151	9365	.	-	.	ID=gene-C9F04_RS10690;Name=C9F04_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10690;old_locus_tag=C9F04_11025
NZ_PYKF01000362.1	Protein Homology	CDS	8151	9365	.	-	0	ID=cds-WP_000667440.1;Parent=gene-C9F04_RS10690;Dbxref=Genbank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9F04_RS10690;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	9630	10118	.	-	.	ID=gene-C9F04_RS10695;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9F04_RS10695;old_locus_tag=C9F04_11030
NZ_PYKF01000362.1	Protein Homology	CDS	9630	10118	.	-	0	ID=cds-WP_001290279.1;Parent=gene-C9F04_RS10695;Dbxref=Genbank:WP_001290279.1;Name=WP_001290279.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9F04_RS10695;product=N-acetyltransferase;protein_id=WP_001290279.1;transl_table=11
NZ_PYKF01000362.1	RefSeq	gene	10590	11133	.	+	.	ID=gene-C9F04_RS10700;Name=C9F04_RS10700;end_range=11133,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10700;old_locus_tag=C9F04_11035;partial=true
NZ_PYKF01000362.1	Protein Homology	CDS	10590	11133	.	+	0	ID=cds-WP_146712617.1;Parent=gene-C9F04_RS10700;Dbxref=Genbank:WP_146712617.1;Name=WP_146712617.1;Ontology_term=GO:0000166;end_range=11133,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9F04_RS10700;partial=true;product=oxidoreductase;protein_id=WP_146712617.1;transl_table=11
##sequence-region NZ_PYKF01000097.1 1 11055
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000097.1	RefSeq	region	1	11055	.	+	.	ID=NZ_PYKF01000097.1:1..11055;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000097.1	RefSeq	pseudogene	1	806	.	-	.	ID=gene-C9F04_RS01795;Name=C9F04_RS01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01795;old_locus_tag=C9F04_01880;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000097.1	Protein Homology	CDS	1	806	.	-	0	ID=cds-C9F04_RS01795;Parent=gene-C9F04_RS01795;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9F04_RS01795;partial=true;product=NADH-quinone oxidoreductase subunit F;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	803	1303	.	-	.	ID=gene-C9F04_RS01800;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9F04_RS01800;old_locus_tag=C9F04_01885
NZ_PYKF01000097.1	Protein Homology	CDS	803	1303	.	-	0	ID=cds-WP_146712210.1;Parent=gene-C9F04_RS01800;Dbxref=Genbank:WP_146712210.1;Name=WP_146712210.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9F04_RS01800;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_146712210.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	1306	3108	.	-	.	ID=gene-C9F04_RS01805;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9F04_RS01805;old_locus_tag=C9F04_01890
NZ_PYKF01000097.1	Protein Homology	CDS	1306	3108	.	-	0	ID=cds-WP_000247855.1;Parent=gene-C9F04_RS01805;Dbxref=Genbank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9F04_RS01805;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	3195	3857	.	-	.	ID=gene-C9F04_RS01810;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9F04_RS01810;old_locus_tag=C9F04_01895
NZ_PYKF01000097.1	Protein Homology	CDS	3195	3857	.	-	0	ID=cds-WP_000386728.1;Parent=gene-C9F04_RS01810;Dbxref=Genbank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9F04_RS01810;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	3873	4316	.	-	.	ID=gene-C9F04_RS01815;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9F04_RS01815;old_locus_tag=C9F04_01900
NZ_PYKF01000097.1	Protein Homology	CDS	3873	4316	.	-	0	ID=cds-WP_000062993.1;Parent=gene-C9F04_RS01815;Dbxref=Genbank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9F04_RS01815;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	4711	4863	.	-	.	ID=gene-C9F04_RS01820;Name=C9F04_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01820;old_locus_tag=C9F04_01905
NZ_PYKF01000097.1	Protein Homology	CDS	4711	4863	.	-	0	ID=cds-WP_001522276.1;Parent=gene-C9F04_RS01820;Dbxref=Genbank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9F04_RS01820;product=hypothetical protein;protein_id=WP_001522276.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	4943	5881	.	-	.	ID=gene-C9F04_RS01825;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9F04_RS01825;old_locus_tag=C9F04_01910
NZ_PYKF01000097.1	Protein Homology	CDS	4943	5881	.	-	0	ID=cds-WP_000606288.1;Parent=gene-C9F04_RS01825;Dbxref=Genbank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9F04_RS01825;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	6814	8028	.	+	.	ID=gene-C9F04_RS01830;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9F04_RS01830;old_locus_tag=C9F04_01920
NZ_PYKF01000097.1	Protein Homology	CDS	6814	8028	.	+	0	ID=cds-WP_000074540.1;Parent=gene-C9F04_RS01830;Dbxref=Genbank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9F04_RS01830;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	8122	8721	.	+	.	ID=gene-C9F04_RS01835;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9F04_RS01835;old_locus_tag=C9F04_01925
NZ_PYKF01000097.1	Protein Homology	CDS	8122	8721	.	+	0	ID=cds-WP_000813882.1;Parent=gene-C9F04_RS01835;Dbxref=Genbank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9F04_RS01835;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	8813	10639	.	-	.	ID=gene-C9F04_RS01845;Name=C9F04_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01845;old_locus_tag=C9F04_01930
NZ_PYKF01000097.1	Protein Homology	CDS	8813	10639	.	-	0	ID=cds-WP_146712211.1;Parent=gene-C9F04_RS01845;Dbxref=Genbank:WP_146712211.1;Name=WP_146712211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F04_RS01845;product=SLC13 family permease;protein_id=WP_146712211.1;transl_table=11
NZ_PYKF01000097.1	RefSeq	gene	10716	11055	.	-	.	ID=gene-C9F04_RS01850;Name=C9F04_RS01850;end_range=11055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01850;old_locus_tag=C9F04_01935;partial=true
NZ_PYKF01000097.1	Protein Homology	CDS	10716	11055	.	-	1	ID=cds-WP_146712212.1;Parent=gene-C9F04_RS01850;Dbxref=Genbank:WP_146712212.1;Name=WP_146712212.1;Ontology_term=GO:0008152,GO:0016787;end_range=11055,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9F04_RS01850;partial=true;product=HAD-IA family hydrolase;protein_id=WP_146712212.1;transl_table=11
##sequence-region NZ_PYKF01000658.1 1 11018
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000658.1	RefSeq	region	1	11018	.	+	.	ID=NZ_PYKF01000658.1:1..11018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000658.1	RefSeq	gene	1	2566	.	-	.	ID=gene-C9F04_RS20135;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F04_RS20135;old_locus_tag=C9F04_20795;partial=true;start_range=.,1
NZ_PYKF01000658.1	Protein Homology	CDS	1	2566	.	-	0	ID=cds-WP_146713074.1;Parent=gene-C9F04_RS20135;Dbxref=Genbank:WP_146713074.1;Name=WP_146713074.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9F04_RS20135;partial=true;product=methionine synthase;protein_id=WP_146713074.1;start_range=.,1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	2871	3695	.	+	.	ID=gene-C9F04_RS20140;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9F04_RS20140;old_locus_tag=C9F04_20800
NZ_PYKF01000658.1	Protein Homology	CDS	2871	3695	.	+	0	ID=cds-WP_000226434.1;Parent=gene-C9F04_RS20140;Dbxref=Genbank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9F04_RS20140;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	3706	4113	.	+	.	ID=gene-C9F04_RS20145;Name=C9F04_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20145;old_locus_tag=C9F04_20805
NZ_PYKF01000658.1	Protein Homology	CDS	3706	4113	.	+	0	ID=cds-WP_010989091.1;Parent=gene-C9F04_RS20145;Dbxref=Genbank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9F04_RS20145;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	4077	5828	.	-	.	ID=gene-C9F04_RS20150;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9F04_RS20150;old_locus_tag=C9F04_20810
NZ_PYKF01000658.1	Protein Homology	CDS	4077	5828	.	-	0	ID=cds-WP_001137268.1;Parent=gene-C9F04_RS20150;Dbxref=Genbank:WP_001137268.1;Name=WP_001137268.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9F04_RS20150;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137268.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	5930	7234	.	-	.	ID=gene-C9F04_RS20155;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9F04_RS20155;old_locus_tag=C9F04_20815
NZ_PYKF01000658.1	Protein Homology	CDS	5930	7234	.	-	0	ID=cds-WP_000857881.1;Parent=gene-C9F04_RS20155;Dbxref=Genbank:WP_000857881.1;Name=WP_000857881.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9F04_RS20155;product=isocitrate lyase;protein_id=WP_000857881.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	7266	8867	.	-	.	ID=gene-C9F04_RS20160;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9F04_RS20160;old_locus_tag=C9F04_20820
NZ_PYKF01000658.1	Protein Homology	CDS	7266	8867	.	-	0	ID=cds-WP_146713075.1;Parent=gene-C9F04_RS20160;Dbxref=Genbank:WP_146713075.1;Name=WP_146713075.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9F04_RS20160;product=malate synthase A;protein_id=WP_146713075.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	9136	10065	.	-	.	ID=gene-C9F04_RS20165;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9F04_RS20165;old_locus_tag=C9F04_20825
NZ_PYKF01000658.1	Protein Homology	CDS	9136	10065	.	-	0	ID=cds-WP_001122767.1;Parent=gene-C9F04_RS20165;Dbxref=Genbank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9F04_RS20165;product=homoserine O-succinyltransferase;protein_id=WP_001122767.1;transl_table=11
NZ_PYKF01000658.1	RefSeq	gene	10222	10659	.	+	.	ID=gene-C9F04_RS20170;Name=C9F04_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20170;old_locus_tag=C9F04_20830
NZ_PYKF01000658.1	Protein Homology	CDS	10222	10659	.	+	0	ID=cds-WP_000973248.1;Parent=gene-C9F04_RS20170;Dbxref=Genbank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9F04_RS20170;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11
##sequence-region NZ_PYKF01000790.1 1 10944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000790.1	RefSeq	region	1	10944	.	+	.	ID=NZ_PYKF01000790.1:1..10944;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000790.1	RefSeq	gene	1	1072	.	-	.	ID=gene-C9F04_RS24645;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F04_RS24645;old_locus_tag=C9F04_25490;partial=true;start_range=.,1
NZ_PYKF01000790.1	Protein Homology	CDS	1	1072	.	-	0	ID=cds-WP_146713312.1;Parent=gene-C9F04_RS24645;Dbxref=Genbank:WP_146713312.1;Name=WP_146713312.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F04_RS24645;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_146713312.1;start_range=.,1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	1082	1612	.	-	.	ID=gene-C9F04_RS24650;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9F04_RS24650;old_locus_tag=C9F04_25495
NZ_PYKF01000790.1	Protein Homology	CDS	1082	1612	.	-	0	ID=cds-WP_000208240.1;Parent=gene-C9F04_RS24650;Dbxref=Genbank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9F04_RS24650;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	1704	2690	.	-	.	ID=gene-C9F04_RS24655;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9F04_RS24655;old_locus_tag=C9F04_25500
NZ_PYKF01000790.1	Protein Homology	CDS	1704	2690	.	-	0	ID=cds-WP_000068803.1;Parent=gene-C9F04_RS24655;Dbxref=Genbank:WP_000068803.1;Name=WP_000068803.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9F04_RS24655;product=cell division protein FtsN;protein_id=WP_000068803.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	2784	3809	.	-	.	ID=gene-C9F04_RS24660;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9F04_RS24660;old_locus_tag=C9F04_25505
NZ_PYKF01000790.1	Protein Homology	CDS	2784	3809	.	-	0	ID=cds-WP_000841337.1;Parent=gene-C9F04_RS24660;Dbxref=Genbank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9F04_RS24660;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	3964	6162	.	-	.	ID=gene-C9F04_RS24665;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9F04_RS24665;old_locus_tag=C9F04_25510
NZ_PYKF01000790.1	Protein Homology	CDS	3964	6162	.	-	0	ID=cds-WP_146713313.1;Parent=gene-C9F04_RS24665;Dbxref=Genbank:WP_146713313.1;Name=WP_146713313.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9F04_RS24665;product=primosomal protein N';protein_id=WP_146713313.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	6366	6578	.	+	.	ID=gene-C9F04_RS24670;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9F04_RS24670;old_locus_tag=C9F04_25515
NZ_PYKF01000790.1	Protein Homology	CDS	6366	6578	.	+	0	ID=cds-WP_000715284.1;Parent=gene-C9F04_RS24670;Dbxref=Genbank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9F04_RS24670;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	6623	7285	.	-	.	ID=gene-C9F04_RS24675;Name=C9F04_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24675;old_locus_tag=C9F04_25520
NZ_PYKF01000790.1	Protein Homology	CDS	6623	7285	.	-	0	ID=cds-WP_000792803.1;Parent=gene-C9F04_RS24675;Dbxref=Genbank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9F04_RS24675;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	7486	9276	.	-	.	ID=gene-C9F04_RS24680;Name=C9F04_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24680;old_locus_tag=C9F04_25525
NZ_PYKF01000790.1	Protein Homology	CDS	7486	9276	.	-	0	ID=cds-WP_000899644.1;Parent=gene-C9F04_RS24680;Dbxref=Genbank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9F04_RS24680;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	9732	10049	.	-	.	ID=gene-C9F04_RS24685;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9F04_RS24685;old_locus_tag=C9F04_25530
NZ_PYKF01000790.1	Protein Homology	CDS	9732	10049	.	-	0	ID=cds-WP_000852811.1;Parent=gene-C9F04_RS24685;Dbxref=Genbank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9F04_RS24685;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11
NZ_PYKF01000790.1	RefSeq	gene	10314	10944	.	+	.	ID=gene-C9F04_RS24690;Name=C9F04_RS24690;end_range=10944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24690;old_locus_tag=C9F04_25535;partial=true
NZ_PYKF01000790.1	Protein Homology	CDS	10314	10944	.	+	0	ID=cds-WP_146713314.1;Parent=gene-C9F04_RS24690;Dbxref=Genbank:WP_146713314.1;Name=WP_146713314.1;Ontology_term=GO:0009058,GO:0030170;end_range=10944,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9F04_RS24690;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_146713314.1;transl_table=11
##sequence-region NZ_PYKF01000345.1 1 10896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000345.1	RefSeq	region	1	10896	.	+	.	ID=NZ_PYKF01000345.1:1..10896;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000345.1	RefSeq	gene	1	648	.	-	.	ID=gene-C9F04_RS10160;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9F04_RS10160;old_locus_tag=C9F04_10480;partial=true;start_range=.,1
NZ_PYKF01000345.1	Protein Homology	CDS	1	648	.	-	0	ID=cds-WP_146712588.1;Parent=gene-C9F04_RS10160;Dbxref=Genbank:WP_146712588.1;Name=WP_146712588.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9F04_RS10160;partial=true;product=flagellar hook-associated protein FlgL;protein_id=WP_146712588.1;start_range=.,1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	663	2324	.	-	.	ID=gene-C9F04_RS10165;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9F04_RS10165;old_locus_tag=C9F04_10485
NZ_PYKF01000345.1	Protein Homology	CDS	663	2324	.	-	0	ID=cds-WP_000096425.1;Parent=gene-C9F04_RS10165;Dbxref=Genbank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9F04_RS10165;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	2389	3339	.	-	.	ID=gene-C9F04_RS10170;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9F04_RS10170;old_locus_tag=C9F04_10490
NZ_PYKF01000345.1	Protein Homology	CDS	2389	3339	.	-	0	ID=cds-WP_146712589.1;Parent=gene-C9F04_RS10170;Dbxref=Genbank:WP_146712589.1;Name=WP_146712589.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9F04_RS10170;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_146712589.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	3339	4436	.	-	.	ID=gene-C9F04_RS10175;Name=C9F04_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10175;old_locus_tag=C9F04_10495
NZ_PYKF01000345.1	Protein Homology	CDS	3339	4436	.	-	0	ID=cds-WP_146712590.1;Parent=gene-C9F04_RS10175;Dbxref=Genbank:WP_146712590.1;Name=WP_146712590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9F04_RS10175;product=flagellar basal body P-ring protein FlgI;protein_id=WP_146712590.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	4448	5146	.	-	.	ID=gene-C9F04_RS10180;Name=C9F04_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10180;old_locus_tag=C9F04_10500
NZ_PYKF01000345.1	Protein Homology	CDS	4448	5146	.	-	0	ID=cds-WP_146712591.1;Parent=gene-C9F04_RS10180;Dbxref=Genbank:WP_146712591.1;Name=WP_146712591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9F04_RS10180;product=flagellar basal body L-ring protein FlgH;protein_id=WP_146712591.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	5201	5983	.	-	.	ID=gene-C9F04_RS10185;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9F04_RS10185;old_locus_tag=C9F04_10505
NZ_PYKF01000345.1	Protein Homology	CDS	5201	5983	.	-	0	ID=cds-WP_000625851.1;Parent=gene-C9F04_RS10185;Dbxref=Genbank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9F04_RS10185;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	5997	6752	.	-	.	ID=gene-C9F04_RS10190;Name=C9F04_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10190;old_locus_tag=C9F04_10510
NZ_PYKF01000345.1	Protein Homology	CDS	5997	6752	.	-	0	ID=cds-WP_000349278.1;Parent=gene-C9F04_RS10190;Dbxref=Genbank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9F04_RS10190;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	6773	7984	.	-	.	ID=gene-C9F04_RS10195;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9F04_RS10195;old_locus_tag=C9F04_10515
NZ_PYKF01000345.1	Protein Homology	CDS	6773	7984	.	-	0	ID=cds-WP_146712592.1;Parent=gene-C9F04_RS10195;Dbxref=Genbank:WP_146712592.1;Name=WP_146712592.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9F04_RS10195;product=flagellar hook protein FlgE;protein_id=WP_146712592.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	8011	8709	.	-	.	ID=gene-C9F04_RS10200;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9F04_RS10200;old_locus_tag=C9F04_10520
NZ_PYKF01000345.1	Protein Homology	CDS	8011	8709	.	-	0	ID=cds-WP_000020450.1;Parent=gene-C9F04_RS10200;Dbxref=Genbank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9F04_RS10200;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	8721	9125	.	-	.	ID=gene-C9F04_RS10205;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9F04_RS10205;old_locus_tag=C9F04_10525
NZ_PYKF01000345.1	Protein Homology	CDS	8721	9125	.	-	0	ID=cds-WP_001196448.1;Parent=gene-C9F04_RS10205;Dbxref=Genbank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9F04_RS10205;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	9129	9545	.	-	.	ID=gene-C9F04_RS10210;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9F04_RS10210;old_locus_tag=C9F04_10530
NZ_PYKF01000345.1	Protein Homology	CDS	9129	9545	.	-	0	ID=cds-WP_000887043.1;Parent=gene-C9F04_RS10210;Dbxref=Genbank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9F04_RS10210;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	9702	10361	.	+	.	ID=gene-C9F04_RS10215;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9F04_RS10215;old_locus_tag=C9F04_10540
NZ_PYKF01000345.1	Protein Homology	CDS	9702	10361	.	+	0	ID=cds-WP_001194086.1;Parent=gene-C9F04_RS10215;Dbxref=Genbank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9F04_RS10215;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	gene	10453	10746	.	+	.	ID=gene-C9F04_RS10220;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9F04_RS10220;old_locus_tag=C9F04_10545
NZ_PYKF01000345.1	Protein Homology	CDS	10453	10746	.	+	0	ID=cds-WP_000020893.1;Parent=gene-C9F04_RS10220;Dbxref=Genbank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9F04_RS10220;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11
NZ_PYKF01000345.1	RefSeq	pseudogene	10751	10896	.	+	.	ID=gene-C9F04_RS27000;Name=C9F04_RS27000;end_range=10896,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27000;partial=true;pseudo=true
NZ_PYKF01000345.1	Protein Homology	CDS	10751	10896	.	+	0	ID=cds-C9F04_RS27000;Parent=gene-C9F04_RS27000;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10896,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9F04_RS27000;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000233.1 1 10872
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000233.1	RefSeq	region	1	10872	.	+	.	ID=NZ_PYKF01000233.1:1..10872;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000233.1	RefSeq	pseudogene	1	192	.	+	.	ID=gene-C9F04_RS06140;Name=C9F04_RS06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06140;old_locus_tag=C9F04_06330;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000233.1	Protein Homology	CDS	1	192	.	+	0	ID=cds-C9F04_RS06140;Parent=gene-C9F04_RS06140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9F04_RS06140;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	182	994	.	+	.	ID=gene-C9F04_RS06145;Name=C9F04_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06145;old_locus_tag=C9F04_06335
NZ_PYKF01000233.1	Protein Homology	CDS	182	994	.	+	0	ID=cds-WP_000966644.1;Parent=gene-C9F04_RS06145;Dbxref=Genbank:WP_000966644.1;Name=WP_000966644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9F04_RS06145;product=ABC transporter permease;protein_id=WP_000966644.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	988	1785	.	+	.	ID=gene-C9F04_RS06150;Name=C9F04_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06150;old_locus_tag=C9F04_06340
NZ_PYKF01000233.1	Protein Homology	CDS	988	1785	.	+	0	ID=cds-WP_135369592.1;Parent=gene-C9F04_RS06150;Dbxref=Genbank:WP_135369592.1;Name=WP_135369592.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9F04_RS06150;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369592.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	1779	2369	.	+	.	ID=gene-C9F04_RS06155;Name=C9F04_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06155;old_locus_tag=C9F04_06345
NZ_PYKF01000233.1	Protein Homology	CDS	1779	2369	.	+	0	ID=cds-WP_050068350.1;Parent=gene-C9F04_RS06155;Dbxref=Genbank:WP_050068350.1;Name=WP_050068350.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9F04_RS06155;product=ATP-binding cassette domain-containing protein;protein_id=WP_050068350.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	2451	3584	.	-	.	ID=gene-C9F04_RS06160;Name=C9F04_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06160;old_locus_tag=C9F04_06350
NZ_PYKF01000233.1	Protein Homology	CDS	2451	3584	.	-	0	ID=cds-WP_050068351.1;Parent=gene-C9F04_RS06160;Dbxref=Genbank:WP_050068351.1;Name=WP_050068351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9F04_RS06160;product=mechanosensitive ion channel family protein;protein_id=WP_050068351.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	3778	4104	.	+	.	ID=gene-C9F04_RS06165;Name=C9F04_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06165;old_locus_tag=C9F04_06355
NZ_PYKF01000233.1	Protein Homology	CDS	3778	4104	.	+	0	ID=cds-WP_001183699.1;Parent=gene-C9F04_RS06165;Dbxref=Genbank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9F04_RS06165;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	4113	4189	.	+	.	ID=gene-C9F04_RS06170;Name=C9F04_RS06170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS06170;old_locus_tag=C9F04_06360
NZ_PYKF01000233.1	tRNAscan-SE	tRNA	4113	4189	.	+	.	ID=rna-C9F04_RS06170;Parent=gene-C9F04_RS06170;anticodon=(pos:4147..4149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS06170;product=tRNA-Arg
NZ_PYKF01000233.1	tRNAscan-SE	exon	4113	4189	.	+	.	ID=exon-C9F04_RS06170-1;Parent=rna-C9F04_RS06170;anticodon=(pos:4147..4149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS06170;product=tRNA-Arg
NZ_PYKF01000233.1	RefSeq	gene	4301	4948	.	+	.	ID=gene-C9F04_RS06175;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9F04_RS06175;old_locus_tag=C9F04_06365
NZ_PYKF01000233.1	Protein Homology	CDS	4301	4948	.	+	0	ID=cds-WP_001574476.1;Parent=gene-C9F04_RS06175;Dbxref=Genbank:WP_001574476.1;Name=WP_001574476.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9F04_RS06175;product=metal-binding protein ZinT;protein_id=WP_001574476.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	5057	5845	.	+	.	ID=gene-C9F04_RS06180;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9F04_RS06180;old_locus_tag=C9F04_06370
NZ_PYKF01000233.1	Protein Homology	CDS	5057	5845	.	+	0	ID=cds-WP_146712417.1;Parent=gene-C9F04_RS06180;Dbxref=Genbank:WP_146712417.1;Name=WP_146712417.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9F04_RS06180;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_146712417.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	5990	6583	.	+	.	ID=gene-C9F04_RS06185;Name=C9F04_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06185;old_locus_tag=C9F04_06375
NZ_PYKF01000233.1	Protein Homology	CDS	5990	6583	.	+	0	ID=cds-WP_001576140.1;Parent=gene-C9F04_RS06185;Dbxref=Genbank:WP_001576140.1;Name=WP_001576140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9F04_RS06185;product=helix-turn-helix transcriptional regulator;protein_id=WP_001576140.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	6652	7500	.	+	.	ID=gene-C9F04_RS06190;Name=C9F04_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06190;old_locus_tag=C9F04_06380
NZ_PYKF01000233.1	Protein Homology	CDS	6652	7500	.	+	0	ID=cds-WP_000190263.1;Parent=gene-C9F04_RS06190;Dbxref=Genbank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9F04_RS06190;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	7755	8003	.	-	.	ID=gene-C9F04_RS06195;Name=C9F04_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06195;old_locus_tag=C9F04_06385
NZ_PYKF01000233.1	Protein Homology	CDS	7755	8003	.	-	0	ID=cds-WP_000208086.1;Parent=gene-C9F04_RS06195;Dbxref=Genbank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9F04_RS06195;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_000208086.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	pseudogene	8082	8236	.	-	.	ID=gene-C9F04_RS26935;Name=C9F04_RS26935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26935;pseudo=true
NZ_PYKF01000233.1	Protein Homology	CDS	8082	8236	.	-	0	ID=cds-C9F04_RS26935;Parent=gene-C9F04_RS26935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9F04_RS26935;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	8319	8864	.	+	.	ID=gene-C9F04_RS06200;Name=C9F04_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06200;old_locus_tag=C9F04_06390
NZ_PYKF01000233.1	Protein Homology	CDS	8319	8864	.	+	0	ID=cds-WP_023258191.1;Parent=gene-C9F04_RS06200;Dbxref=Genbank:WP_023258191.1;Name=WP_023258191.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9F04_RS06200;product=chorismate mutase;protein_id=WP_023258191.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	9061	9699	.	+	.	ID=gene-C9F04_RS06205;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9F04_RS06205;old_locus_tag=C9F04_06395
NZ_PYKF01000233.1	Protein Homology	CDS	9061	9699	.	+	0	ID=cds-WP_000457190.1;Parent=gene-C9F04_RS06205;Dbxref=Genbank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9F04_RS06205;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	9872	10234	.	+	.	ID=gene-C9F04_RS06210;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9F04_RS06210;old_locus_tag=C9F04_06405
NZ_PYKF01000233.1	Protein Homology	CDS	9872	10234	.	+	0	ID=cds-WP_001248993.1;Parent=gene-C9F04_RS06210;Dbxref=Genbank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9F04_RS06210;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	gene	10237	10419	.	+	.	ID=gene-C9F04_RS06215;Name=C9F04_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06215;old_locus_tag=C9F04_06410
NZ_PYKF01000233.1	Protein Homology	CDS	10237	10419	.	+	0	ID=cds-WP_000513733.1;Parent=gene-C9F04_RS06215;Dbxref=Genbank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9F04_RS06215;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11
NZ_PYKF01000233.1	RefSeq	pseudogene	10649	10843	.	+	.	ID=gene-C9F04_RS06220;Name=C9F04_RS06220;end_range=10843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06220;old_locus_tag=C9F04_06415;partial=true;pseudo=true
NZ_PYKF01000233.1	Protein Homology	CDS	10649	10843	.	+	0	ID=cds-C9F04_RS06220;Parent=gene-C9F04_RS06220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9F04_RS06220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000411.1 1 10813
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000411.1	RefSeq	region	1	10813	.	+	.	ID=NZ_PYKF01000411.1:1..10813;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000411.1	RefSeq	pseudogene	1	397	.	+	.	ID=gene-C9F04_RS12170;Name=C9F04_RS12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12170;old_locus_tag=C9F04_12585;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000411.1	Protein Homology	CDS	1	397	.	+	1	ID=cds-C9F04_RS12170;Parent=gene-C9F04_RS12170;Note=involved in autoinducer 2 transport and processing%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9F04_RS12170;partial=true;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	480	770	.	+	.	ID=gene-C9F04_RS12175;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9F04_RS12175;old_locus_tag=C9F04_12590
NZ_PYKF01000411.1	Protein Homology	CDS	480	770	.	+	0	ID=cds-WP_001543603.1;Parent=gene-C9F04_RS12175;Dbxref=Genbank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9F04_RS12175;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	780	1544	.	+	.	ID=gene-C9F04_RS12180;Name=C9F04_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12180;old_locus_tag=C9F04_12595
NZ_PYKF01000411.1	Protein Homology	CDS	780	1544	.	+	0	ID=cds-WP_135369519.1;Parent=gene-C9F04_RS12180;Dbxref=Genbank:WP_135369519.1;Name=WP_135369519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9F04_RS12180;product=epimerase;protein_id=WP_135369519.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	1636	2403	.	-	.	ID=gene-C9F04_RS12185;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9F04_RS12185;old_locus_tag=C9F04_12600
NZ_PYKF01000411.1	Protein Homology	CDS	1636	2403	.	-	0	ID=cds-WP_001216339.1;Parent=gene-C9F04_RS12185;Dbxref=Genbank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9F04_RS12185;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	2516	3112	.	-	.	ID=gene-C9F04_RS12190;Name=C9F04_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12190;old_locus_tag=C9F04_12605
NZ_PYKF01000411.1	Protein Homology	CDS	2516	3112	.	-	0	ID=cds-WP_000802241.1;Parent=gene-C9F04_RS12190;Dbxref=Genbank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9F04_RS12190;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	3213	3641	.	+	.	ID=gene-C9F04_RS12195;Name=C9F04_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12195;old_locus_tag=C9F04_12610
NZ_PYKF01000411.1	Protein Homology	CDS	3213	3641	.	+	0	ID=cds-WP_146712684.1;Parent=gene-C9F04_RS12195;Dbxref=Genbank:WP_146712684.1;Name=WP_146712684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=C9F04_RS12195;product=DUF805 domain-containing protein;protein_id=WP_146712684.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	3747	4493	.	-	.	ID=gene-C9F04_RS12200;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9F04_RS12200;old_locus_tag=C9F04_12615
NZ_PYKF01000411.1	Protein Homology	CDS	3747	4493	.	-	0	ID=cds-WP_000796303.1;Parent=gene-C9F04_RS12200;Dbxref=Genbank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9F04_RS12200;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	4590	5600	.	-	.	ID=gene-C9F04_RS12205;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9F04_RS12205;old_locus_tag=C9F04_12620
NZ_PYKF01000411.1	Protein Homology	CDS	4590	5600	.	-	0	ID=cds-WP_001250617.1;Parent=gene-C9F04_RS12205;Dbxref=Genbank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9F04_RS12205;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	5712	7220	.	-	.	ID=gene-C9F04_RS12210;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9F04_RS12210;old_locus_tag=C9F04_12625
NZ_PYKF01000411.1	Protein Homology	CDS	5712	7220	.	-	0	ID=cds-WP_146712685.1;Parent=gene-C9F04_RS12210;Dbxref=Genbank:WP_146712685.1;Name=WP_146712685.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9F04_RS12210;product=glycerol kinase GlpK;protein_id=WP_146712685.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	7241	8086	.	-	.	ID=gene-C9F04_RS12215;Name=C9F04_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12215;old_locus_tag=C9F04_12630
NZ_PYKF01000411.1	Protein Homology	CDS	7241	8086	.	-	0	ID=cds-WP_146712686.1;Parent=gene-C9F04_RS12215;Dbxref=Genbank:WP_146712686.1;Name=WP_146712686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9F04_RS12215;product=aquaporin;protein_id=WP_146712686.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	8485	8724	.	+	.	ID=gene-C9F04_RS12220;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9F04_RS12220;old_locus_tag=C9F04_12635
NZ_PYKF01000411.1	Protein Homology	CDS	8485	8724	.	+	0	ID=cds-WP_000051370.1;Parent=gene-C9F04_RS12220;Dbxref=Genbank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9F04_RS12220;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	8946	9431	.	-	.	ID=gene-C9F04_RS12225;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9F04_RS12225;old_locus_tag=C9F04_12640
NZ_PYKF01000411.1	Protein Homology	CDS	8946	9431	.	-	0	ID=cds-WP_000872918.1;Parent=gene-C9F04_RS12225;Dbxref=Genbank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9F04_RS12225;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	gene	9524	10453	.	-	.	ID=gene-C9F04_RS12230;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9F04_RS12230;old_locus_tag=C9F04_12645
NZ_PYKF01000411.1	Protein Homology	CDS	9524	10453	.	-	0	ID=cds-WP_000139639.1;Parent=gene-C9F04_RS12230;Dbxref=Genbank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9F04_RS12230;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11
NZ_PYKF01000411.1	RefSeq	pseudogene	10520	10813	.	-	.	ID=gene-C9F04_RS12235;Name=hslU;end_range=10813,.;gbkey=Gene;gene=hslU;gene_biotype=pseudogene;locus_tag=C9F04_RS12235;old_locus_tag=C9F04_12650;partial=true;pseudo=true
NZ_PYKF01000411.1	Protein Homology	CDS	10520	10813	.	-	0	ID=cds-C9F04_RS12235;Parent=gene-C9F04_RS12235;Note=heat shock protein involved in degradation of misfolded proteins%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10813,.;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F04_RS12235;partial=true;product=HslU--HslV peptidase ATPase subunit;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000834.1 1 27039
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000834.1	RefSeq	region	1	27039	.	+	.	ID=NZ_PYKF01000834.1:1..27039;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000834.1	RefSeq	pseudogene	63	149	.	+	.	ID=gene-C9F04_RS26160;Name=C9F04_RS26160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26160;old_locus_tag=C9F04_27075;partial=true;pseudo=true;start_range=.,63
NZ_PYKF01000834.1	Protein Homology	CDS	63	149	.	+	0	ID=cds-C9F04_RS26160;Parent=gene-C9F04_RS26160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9F04_RS26160;partial=true;product=4-hydroxy-2-ketovalerate aldolase;pseudo=true;start_range=.,63;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	385	1314	.	+	.	ID=gene-C9F04_RS26165;Name=C9F04_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26165;old_locus_tag=C9F04_27080
NZ_PYKF01000834.1	Protein Homology	CDS	385	1314	.	+	0	ID=cds-WP_000749536.1;Parent=gene-C9F04_RS26165;Dbxref=Genbank:WP_000749536.1;Name=WP_000749536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9F04_RS26165;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749536.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	1357	2259	.	-	.	ID=gene-C9F04_RS26170;Name=C9F04_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26170;old_locus_tag=C9F04_27085
NZ_PYKF01000834.1	Protein Homology	CDS	1357	2259	.	-	0	ID=cds-WP_000535970.1;Parent=gene-C9F04_RS26170;Dbxref=Genbank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9F04_RS26170;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	2765	3460	.	+	.	ID=gene-C9F04_RS26175;Name=C9F04_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26175;old_locus_tag=C9F04_27090
NZ_PYKF01000834.1	Protein Homology	CDS	2765	3460	.	+	0	ID=cds-WP_000392697.1;Parent=gene-C9F04_RS26175;Dbxref=Genbank:WP_000392697.1;Name=WP_000392697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9F04_RS26175;product=MgtC family protein;protein_id=WP_000392697.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	3679	6405	.	+	.	ID=gene-C9F04_RS26180;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F04_RS26180;old_locus_tag=C9F04_27095
NZ_PYKF01000834.1	Protein Homology	CDS	3679	6405	.	+	0	ID=cds-WP_000131299.1;Parent=gene-C9F04_RS26180;Dbxref=Genbank:WP_000131299.1;Name=WP_000131299.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9F04_RS26180;product=magnesium-translocating P-type ATPase;protein_id=WP_000131299.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	6427	6519	.	+	.	ID=gene-C9F04_RS26185;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9F04_RS26185;old_locus_tag=C9F04_27100
NZ_PYKF01000834.1	Protein Homology	CDS	6427	6519	.	+	0	ID=cds-WP_001082117.1;Parent=gene-C9F04_RS26185;Dbxref=Genbank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9F04_RS26185;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	6532	6618	.	+	.	ID=gene-C9F04_RS27300;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9F04_RS27300
NZ_PYKF01000834.1	Protein Homology	CDS	6532	6618	.	+	0	ID=cds-WP_252515021.1;Parent=gene-C9F04_RS27300;Dbxref=Genbank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9F04_RS27300;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	6720	7199	.	+	.	ID=gene-C9F04_RS26190;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9F04_RS26190;old_locus_tag=C9F04_27105
NZ_PYKF01000834.1	Protein Homology	CDS	6720	7199	.	+	0	ID=cds-WP_146713382.1;Parent=gene-C9F04_RS26190;Dbxref=Genbank:WP_146713382.1;Name=WP_146713382.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9F04_RS26190;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_146713382.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	7367	8047	.	-	.	ID=gene-C9F04_RS26195;Name=C9F04_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26195;old_locus_tag=C9F04_27110
NZ_PYKF01000834.1	Protein Homology	CDS	7367	8047	.	-	0	ID=cds-WP_000106461.1;Parent=gene-C9F04_RS26195;Dbxref=Genbank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=C9F04_RS26195;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	8831	9688	.	+	.	ID=gene-C9F04_RS26205;Name=C9F04_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26205;old_locus_tag=C9F04_27120
NZ_PYKF01000834.1	Protein Homology	CDS	8831	9688	.	+	0	ID=cds-WP_135369318.1;Parent=gene-C9F04_RS26205;Dbxref=Genbank:WP_135369318.1;Name=WP_135369318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9F04_RS26205;product=transcriptional regulator;protein_id=WP_135369318.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	9699	10163	.	+	.	ID=gene-C9F04_RS26210;Name=C9F04_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26210;old_locus_tag=C9F04_27125
NZ_PYKF01000834.1	Protein Homology	CDS	9699	10163	.	+	0	ID=cds-WP_001521985.1;Parent=gene-C9F04_RS26210;Dbxref=Genbank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9F04_RS26210;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	10258	13056	.	-	.	ID=gene-C9F04_RS26215;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9F04_RS26215;old_locus_tag=C9F04_27130
NZ_PYKF01000834.1	Protein Homology	CDS	10258	13056	.	-	0	ID=cds-WP_146713383.1;Parent=gene-C9F04_RS26215;Dbxref=Genbank:WP_146713383.1;Name=WP_146713383.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9F04_RS26215;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_146713383.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	13131	13748	.	-	.	ID=gene-C9F04_RS26220;Name=C9F04_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26220;old_locus_tag=C9F04_27135
NZ_PYKF01000834.1	Protein Homology	CDS	13131	13748	.	-	0	ID=cds-WP_000984812.1;Parent=gene-C9F04_RS26220;Dbxref=Genbank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9F04_RS26220;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	pseudogene	14505	14615	.	-	.	ID=gene-C9F04_RS26835;Name=C9F04_RS26835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26835;partial=true;pseudo=true;start_range=.,14505
NZ_PYKF01000834.1	Protein Homology	CDS	14505	14615	.	-	0	ID=cds-C9F04_RS26835;Parent=gene-C9F04_RS26835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=C9F04_RS26835;partial=true;product=transposase;pseudo=true;start_range=.,14505;transl_table=11
NZ_PYKF01000834.1	RefSeq	pseudogene	15255	15510	.	+	.	ID=gene-C9F04_RS26225;Name=C9F04_RS26225;end_range=15510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26225;old_locus_tag=C9F04_27140;partial=true;pseudo=true
NZ_PYKF01000834.1	Protein Homology	CDS	15255	15510	.	+	0	ID=cds-C9F04_RS26225;Parent=gene-C9F04_RS26225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=C9F04_RS26225;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	15900	16529	.	+	.	ID=gene-C9F04_RS26230;Name=C9F04_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26230;old_locus_tag=C9F04_27145
NZ_PYKF01000834.1	Protein Homology	CDS	15900	16529	.	+	0	ID=cds-WP_023200971.1;Parent=gene-C9F04_RS26230;Dbxref=Genbank:WP_023200971.1;Name=WP_023200971.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=C9F04_RS26230;product=fimbrial protein;protein_id=WP_023200971.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	16673	17416	.	+	.	ID=gene-C9F04_RS26235;Name=C9F04_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26235;old_locus_tag=C9F04_27150
NZ_PYKF01000834.1	Protein Homology	CDS	16673	17416	.	+	0	ID=cds-WP_000882257.1;Parent=gene-C9F04_RS26235;Dbxref=Genbank:WP_000882257.1;Name=WP_000882257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=C9F04_RS26235;product=fimbrial chaperone;protein_id=WP_000882257.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	17437	20037	.	+	.	ID=gene-C9F04_RS26240;Name=C9F04_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26240;old_locus_tag=C9F04_27155
NZ_PYKF01000834.1	Protein Homology	CDS	17437	20037	.	+	0	ID=cds-WP_135369672.1;Parent=gene-C9F04_RS26240;Dbxref=Genbank:WP_135369672.1;Name=WP_135369672.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=C9F04_RS26240;product=outer membrane usher protein;protein_id=WP_135369672.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	20051	20635	.	+	.	ID=gene-C9F04_RS26245;Name=C9F04_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26245;old_locus_tag=C9F04_27160
NZ_PYKF01000834.1	Protein Homology	CDS	20051	20635	.	+	0	ID=cds-WP_023243747.1;Parent=gene-C9F04_RS26245;Dbxref=Genbank:WP_023243747.1;Name=WP_023243747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=C9F04_RS26245;product=fimbrial protein;protein_id=WP_023243747.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	20650	21258	.	+	.	ID=gene-C9F04_RS26250;Name=C9F04_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26250;old_locus_tag=C9F04_27165
NZ_PYKF01000834.1	Protein Homology	CDS	20650	21258	.	+	0	ID=cds-WP_001080417.1;Parent=gene-C9F04_RS26250;Dbxref=Genbank:WP_001080417.1;Name=WP_001080417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=C9F04_RS26250;product=fimbrial protein;protein_id=WP_001080417.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	21274	21867	.	+	.	ID=gene-C9F04_RS26255;Name=C9F04_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26255;old_locus_tag=C9F04_27170
NZ_PYKF01000834.1	Protein Homology	CDS	21274	21867	.	+	0	ID=cds-WP_135369671.1;Parent=gene-C9F04_RS26255;Dbxref=Genbank:WP_135369671.1;Name=WP_135369671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9F04_RS26255;product=fimbrial-like protein;protein_id=WP_135369671.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	21891	23120	.	+	.	ID=gene-C9F04_RS26260;Name=C9F04_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26260;old_locus_tag=C9F04_27175
NZ_PYKF01000834.1	Protein Homology	CDS	21891	23120	.	+	0	ID=cds-WP_135369670.1;Parent=gene-C9F04_RS26260;Dbxref=Genbank:WP_135369670.1;Name=WP_135369670.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=C9F04_RS26260;product=fimbrial protein;protein_id=WP_135369670.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	pseudogene	23464	23529	.	+	.	ID=gene-C9F04_RS27305;Name=C9F04_RS27305;end_range=23529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27305;partial=true;pseudo=true
NZ_PYKF01000834.1	Protein Homology	CDS	23464	23529	.	+	0	ID=cds-C9F04_RS27305;Parent=gene-C9F04_RS27305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104290.1;locus_tag=C9F04_RS27305;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	23670	23873	.	-	.	ID=gene-C9F04_RS26265;Name=C9F04_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26265;old_locus_tag=C9F04_27180
NZ_PYKF01000834.1	Protein Homology	CDS	23670	23873	.	-	0	ID=cds-WP_023200967.1;Parent=gene-C9F04_RS26265;Dbxref=Genbank:WP_023200967.1;Name=WP_023200967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.2;locus_tag=C9F04_RS26265;product=IS5 family transposase;protein_id=WP_023200967.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	gene	24311	24405	.	-	.	ID=gene-C9F04_RS26270;Name=C9F04_RS26270;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS26270;old_locus_tag=C9F04_27185
NZ_PYKF01000834.1	tRNAscan-SE	tRNA	24311	24405	.	-	.	ID=rna-C9F04_RS26270;Parent=gene-C9F04_RS26270;anticodon=(pos:complement(24369..24371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS26270;product=tRNA-Sec
NZ_PYKF01000834.1	tRNAscan-SE	exon	24311	24405	.	-	.	ID=exon-C9F04_RS26270-1;Parent=rna-C9F04_RS26270;anticodon=(pos:complement(24369..24371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS26270;product=tRNA-Sec
NZ_PYKF01000834.1	RefSeq	gene	24693	26075	.	+	.	ID=gene-C9F04_RS26275;Name=C9F04_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26275;old_locus_tag=C9F04_27190
NZ_PYKF01000834.1	Protein Homology	CDS	24693	26075	.	+	0	ID=cds-WP_000834259.1;Parent=gene-C9F04_RS26275;Dbxref=Genbank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9F04_RS26275;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11
NZ_PYKF01000834.1	RefSeq	pseudogene	26087	27039	.	+	.	ID=gene-C9F04_RS26280;Name=C9F04_RS26280;end_range=27039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26280;old_locus_tag=C9F04_27195;partial=true;pseudo=true
NZ_PYKF01000834.1	Protein Homology	CDS	26087	27039	.	+	0	ID=cds-C9F04_RS26280;Parent=gene-C9F04_RS26280;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=27039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9F04_RS26280;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000750.1 1 10775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000750.1	RefSeq	region	1	10775	.	+	.	ID=NZ_PYKF01000750.1:1..10775;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000750.1	RefSeq	gene	1	799	.	-	.	ID=gene-C9F04_RS23245;Name=C9F04_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23245;old_locus_tag=C9F04_24015;partial=true;start_range=.,1
NZ_PYKF01000750.1	Protein Homology	CDS	1	799	.	-	0	ID=cds-WP_186799087.1;Parent=gene-C9F04_RS23245;Dbxref=Genbank:WP_186799087.1;Name=WP_186799087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123959.1;locus_tag=C9F04_RS23245;partial=true;product=inner membrane CreD family protein;protein_id=WP_186799087.1;start_range=.,1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	857	2281	.	-	.	ID=gene-C9F04_RS23250;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9F04_RS23250;old_locus_tag=C9F04_24020
NZ_PYKF01000750.1	Protein Homology	CDS	857	2281	.	-	0	ID=cds-WP_023232163.1;Parent=gene-C9F04_RS23250;Dbxref=Genbank:WP_023232163.1;Name=WP_023232163.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=creC;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9F04_RS23250;product=two-component system sensor histidine kinase CreC;protein_id=WP_023232163.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	2281	2970	.	-	.	ID=gene-C9F04_RS23255;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9F04_RS23255;old_locus_tag=C9F04_24025
NZ_PYKF01000750.1	Protein Homology	CDS	2281	2970	.	-	0	ID=cds-WP_146713245.1;Parent=gene-C9F04_RS23255;Dbxref=Genbank:WP_146713245.1;Name=WP_146713245.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9F04_RS23255;product=two-component system response regulator CreB;protein_id=WP_146713245.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	2983	3456	.	-	.	ID=gene-C9F04_RS23260;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9F04_RS23260;old_locus_tag=C9F04_24030
NZ_PYKF01000750.1	Protein Homology	CDS	2983	3456	.	-	0	ID=cds-WP_000875811.1;Parent=gene-C9F04_RS23260;Dbxref=Genbank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9F04_RS23260;product=protein CreA;protein_id=WP_000875811.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	3668	4537	.	+	.	ID=gene-C9F04_RS23265;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9F04_RS23265;old_locus_tag=C9F04_24035
NZ_PYKF01000750.1	Protein Homology	CDS	3668	4537	.	+	0	ID=cds-WP_000371685.1;Parent=gene-C9F04_RS23265;Dbxref=Genbank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9F04_RS23265;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	4534	5181	.	-	.	ID=gene-C9F04_RS23270;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9F04_RS23270;old_locus_tag=C9F04_24040
NZ_PYKF01000750.1	Protein Homology	CDS	4534	5181	.	-	0	ID=cds-WP_000942363.1;Parent=gene-C9F04_RS23270;Dbxref=Genbank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9F04_RS23270;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	5230	5745	.	+	.	ID=gene-C9F04_RS23275;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9F04_RS23275;old_locus_tag=C9F04_24045
NZ_PYKF01000750.1	Protein Homology	CDS	5230	5745	.	+	0	ID=cds-WP_000554310.1;Parent=gene-C9F04_RS23275;Dbxref=Genbank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9F04_RS23275;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	5847	6173	.	-	.	ID=gene-C9F04_RS23280;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9F04_RS23280;old_locus_tag=C9F04_24055
NZ_PYKF01000750.1	Protein Homology	CDS	5847	6173	.	-	0	ID=cds-WP_000192003.1;Parent=gene-C9F04_RS23280;Dbxref=Genbank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9F04_RS23280;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	6231	8168	.	-	.	ID=gene-C9F04_RS23285;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9F04_RS23285;old_locus_tag=C9F04_24060
NZ_PYKF01000750.1	Protein Homology	CDS	6231	8168	.	-	0	ID=cds-WP_146713246.1;Parent=gene-C9F04_RS23285;Dbxref=Genbank:WP_146713246.1;Name=WP_146713246.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=C9F04_RS23285;product=murein transglycosylase;protein_id=WP_146713246.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	8377	10044	.	+	.	ID=gene-C9F04_RS23290;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9F04_RS23290;old_locus_tag=C9F04_24070
NZ_PYKF01000750.1	Protein Homology	CDS	8377	10044	.	+	0	ID=cds-WP_146713247.1;Parent=gene-C9F04_RS23290;Dbxref=Genbank:WP_146713247.1;Name=WP_146713247.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9F04_RS23290;product=energy-dependent translational throttle protein EttA;protein_id=WP_146713247.1;transl_table=11
NZ_PYKF01000750.1	RefSeq	gene	10162	10775	.	-	.	ID=gene-C9F04_RS23295;Name=nadR;end_range=10775,.;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9F04_RS23295;old_locus_tag=C9F04_24075;partial=true
NZ_PYKF01000750.1	Protein Homology	CDS	10162	10775	.	-	2	ID=cds-WP_146713248.1;Parent=gene-C9F04_RS23295;Dbxref=Genbank:WP_146713248.1;Name=WP_146713248.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;end_range=10775,.;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9F04_RS23295;partial=true;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_146713248.1;transl_table=11
##sequence-region NZ_PYKF01000600.1 1 10754
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000600.1	RefSeq	region	1	10754	.	+	.	ID=NZ_PYKF01000600.1:1..10754;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000600.1	RefSeq	gene	1	557	.	+	.	ID=gene-C9F04_RS17905;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9F04_RS17905;old_locus_tag=C9F04_18470;partial=true;start_range=.,1
NZ_PYKF01000600.1	Protein Homology	CDS	1	557	.	+	2	ID=cds-WP_146712972.1;Parent=gene-C9F04_RS17905;Dbxref=Genbank:WP_146712972.1;Name=WP_146712972.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=glnP;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F04_RS17905;partial=true;product=glutamine ABC transporter permease GlnP;protein_id=WP_146712972.1;start_range=.,1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	554	1276	.	+	.	ID=gene-C9F04_RS17910;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9F04_RS17910;old_locus_tag=C9F04_18475
NZ_PYKF01000600.1	Protein Homology	CDS	554	1276	.	+	0	ID=cds-WP_000569093.1;Parent=gene-C9F04_RS17910;Dbxref=Genbank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9F04_RS17910;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	1395	3617	.	+	.	ID=gene-C9F04_RS17915;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9F04_RS17915;old_locus_tag=C9F04_18480
NZ_PYKF01000600.1	Protein Homology	CDS	1395	3617	.	+	0	ID=cds-WP_146712973.1;Parent=gene-C9F04_RS17915;Dbxref=Genbank:WP_146712973.1;Name=WP_146712973.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F04_RS17915;product=mechanosensitive channel protein;protein_id=WP_146712973.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	3614	4540	.	-	.	ID=gene-C9F04_RS17920;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9F04_RS17920;old_locus_tag=C9F04_18485
NZ_PYKF01000600.1	Protein Homology	CDS	3614	4540	.	-	0	ID=cds-WP_001275962.1;Parent=gene-C9F04_RS17920;Dbxref=Genbank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9F04_RS17920;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	4745	5011	.	+	.	ID=gene-C9F04_RS17925;Name=C9F04_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17925;old_locus_tag=C9F04_18490
NZ_PYKF01000600.1	Protein Homology	CDS	4745	5011	.	+	0	ID=cds-WP_146712974.1;Parent=gene-C9F04_RS17925;Dbxref=Genbank:WP_146712974.1;Name=WP_146712974.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9F04_RS17925;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_146712974.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	5296	5556	.	+	.	ID=gene-C9F04_RS17930;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9F04_RS17930;old_locus_tag=C9F04_18495
NZ_PYKF01000600.1	Protein Homology	CDS	5296	5556	.	+	0	ID=cds-WP_000849092.1;Parent=gene-C9F04_RS17930;Dbxref=Genbank:WP_000849092.1;Name=WP_000849092.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9F04_RS17930;product=DUF1471 family protein YbiJ;protein_id=WP_000849092.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	5712	6686	.	-	.	ID=gene-C9F04_RS17935;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9F04_RS17935;old_locus_tag=C9F04_18500
NZ_PYKF01000600.1	Protein Homology	CDS	5712	6686	.	-	0	ID=cds-WP_135369515.1;Parent=gene-C9F04_RS17935;Dbxref=Genbank:WP_135369515.1;Name=WP_135369515.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9F04_RS17935;product=DNA-binding protein YbiB;protein_id=WP_135369515.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	6716	8860	.	-	.	ID=gene-C9F04_RS17940;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9F04_RS17940;old_locus_tag=C9F04_18505
NZ_PYKF01000600.1	Protein Homology	CDS	6716	8860	.	-	0	ID=cds-WP_001218630.1;Parent=gene-C9F04_RS17940;Dbxref=Genbank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9F04_RS17940;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	9068	10429	.	-	.	ID=gene-C9F04_RS17945;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9F04_RS17945;old_locus_tag=C9F04_18510
NZ_PYKF01000600.1	Protein Homology	CDS	9068	10429	.	-	0	ID=cds-WP_000007065.1;Parent=gene-C9F04_RS17945;Dbxref=Genbank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9F04_RS17945;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11
NZ_PYKF01000600.1	RefSeq	gene	10611	10754	.	-	.	ID=gene-C9F04_RS27155;Name=C9F04_RS27155;end_range=10754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27155;partial=true
NZ_PYKF01000600.1	Protein Homology	CDS	10611	10754	.	-	0	ID=cds-WP_165900407.1;Parent=gene-C9F04_RS27155;Dbxref=Genbank:WP_165900407.1;Name=WP_165900407.1;end_range=10754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920270.1;locus_tag=C9F04_RS27155;partial=true;product=hypothetical protein;protein_id=WP_165900407.1;transl_table=11
##sequence-region NZ_PYKF01000322.1 1 10681
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000322.1	RefSeq	region	1	10681	.	+	.	ID=NZ_PYKF01000322.1:1..10681;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000322.1	RefSeq	gene	1	2202	.	+	.	ID=gene-C9F04_RS09405;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9F04_RS09405;old_locus_tag=C9F04_09710;partial=true;start_range=.,1
NZ_PYKF01000322.1	Protein Homology	CDS	1	2202	.	+	0	ID=cds-WP_146712544.1;Parent=gene-C9F04_RS09405;Dbxref=Genbank:WP_146712544.1;Name=WP_146712544.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9F04_RS09405;partial=true;product=pitrilysin;protein_id=WP_146712544.1;start_range=.,1;transl_table=11
NZ_PYKF01000322.1	RefSeq	gene	2195	5740	.	+	.	ID=gene-C9F04_RS09410;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F04_RS09410;old_locus_tag=C9F04_09715
NZ_PYKF01000322.1	Protein Homology	CDS	2195	5740	.	+	0	ID=cds-WP_001000533.1;Parent=gene-C9F04_RS09410;Dbxref=Genbank:WP_001000533.1;Name=WP_001000533.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9F04_RS09410;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000533.1;transl_table=11
NZ_PYKF01000322.1	RefSeq	pseudogene	5737	7572	.	+	.	ID=gene-C9F04_RS09415;Name=recD;gbkey=Gene;gene=recD;gene_biotype=pseudogene;locus_tag=C9F04_RS09415;old_locus_tag=C9F04_09720;pseudo=true
NZ_PYKF01000322.1	Protein Homology	CDS	5737	7572	.	+	0	ID=cds-C9F04_RS09415;Parent=gene-C9F04_RS09415;Note=internal stop;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=C9F04_RS09415;product=exodeoxyribonuclease V subunit alpha;pseudo=true;transl_table=11
NZ_PYKF01000322.1	RefSeq	gene	7675	9006	.	-	.	ID=gene-C9F04_RS09420;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9F04_RS09420;old_locus_tag=C9F04_09725
NZ_PYKF01000322.1	Protein Homology	CDS	7675	9006	.	-	0	ID=cds-WP_000588964.1;Parent=gene-C9F04_RS09420;Dbxref=Genbank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9F04_RS09420;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11
NZ_PYKF01000322.1	RefSeq	gene	9239	10492	.	+	.	ID=gene-C9F04_RS09425;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9F04_RS09425;old_locus_tag=C9F04_09730
NZ_PYKF01000322.1	Protein Homology	CDS	9239	10492	.	+	0	ID=cds-WP_000011919.1;Parent=gene-C9F04_RS09425;Dbxref=Genbank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9F04_RS09425;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11
NZ_PYKF01000322.1	RefSeq	gene	10605	10681	.	-	.	ID=gene-C9F04_RS09430;Name=C9F04_RS09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS09430;old_locus_tag=C9F04_09735
NZ_PYKF01000322.1	tRNAscan-SE	tRNA	10605	10681	.	-	.	ID=rna-C9F04_RS09430;Parent=gene-C9F04_RS09430;anticodon=(pos:complement(10645..10647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS09430;product=tRNA-Met
NZ_PYKF01000322.1	tRNAscan-SE	exon	10605	10681	.	-	.	ID=exon-C9F04_RS09430-1;Parent=rna-C9F04_RS09430;anticodon=(pos:complement(10645..10647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS09430;product=tRNA-Met
##sequence-region NZ_PYKF01000348.1 1 10594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000348.1	RefSeq	region	1	10594	.	+	.	ID=NZ_PYKF01000348.1:1..10594;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000348.1	RefSeq	gene	1	1423	.	-	.	ID=gene-C9F04_RS10240;Name=C9F04_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10240;partial=true;start_range=.,1
NZ_PYKF01000348.1	Protein Homology	CDS	1	1423	.	-	0	ID=cds-WP_146712594.1;Parent=gene-C9F04_RS10240;Dbxref=Genbank:WP_146712594.1;Name=WP_146712594.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F04_RS10240;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146712594.1;start_range=.,1;transl_except=(pos:complement(836..838)%2Caa:Sec);transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	1618	2454	.	+	.	ID=gene-C9F04_RS10245;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9F04_RS10245;old_locus_tag=C9F04_10575
NZ_PYKF01000348.1	Protein Homology	CDS	1618	2454	.	+	0	ID=cds-WP_001059744.1;Parent=gene-C9F04_RS10245;Dbxref=Genbank:WP_001059744.1;Name=WP_001059744.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9F04_RS10245;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059744.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	2730	3761	.	-	.	ID=gene-C9F04_RS10250;Name=C9F04_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10250;old_locus_tag=C9F04_10580
NZ_PYKF01000348.1	Protein Homology	CDS	2730	3761	.	-	0	ID=cds-WP_000710967.1;Parent=gene-C9F04_RS10250;Dbxref=Genbank:WP_000710967.1;Name=WP_000710967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9F04_RS10250;product=YiiG family protein;protein_id=WP_000710967.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	3944	5044	.	+	.	ID=gene-C9F04_RS10255;Name=C9F04_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10255;old_locus_tag=C9F04_10585
NZ_PYKF01000348.1	Protein Homology	CDS	3944	5044	.	+	0	ID=cds-WP_146712595.1;Parent=gene-C9F04_RS10255;Dbxref=Genbank:WP_146712595.1;Name=WP_146712595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9F04_RS10255;product=DUF3829 domain-containing protein;protein_id=WP_146712595.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	5399	5722	.	-	.	ID=gene-C9F04_RS10260;Name=C9F04_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10260;old_locus_tag=C9F04_10590
NZ_PYKF01000348.1	Protein Homology	CDS	5399	5722	.	-	0	ID=cds-WP_000527676.1;Parent=gene-C9F04_RS10260;Dbxref=Genbank:WP_000527676.1;Name=WP_000527676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9F04_RS10260;product=AzlD domain-containing protein;protein_id=WP_000527676.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	5722	6381	.	-	.	ID=gene-C9F04_RS10265;Name=C9F04_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10265;old_locus_tag=C9F04_10595
NZ_PYKF01000348.1	Protein Homology	CDS	5722	6381	.	-	0	ID=cds-WP_000683586.1;Parent=gene-C9F04_RS10265;Dbxref=Genbank:WP_000683586.1;Name=WP_000683586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9F04_RS10265;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	6482	7030	.	+	.	ID=gene-C9F04_RS10270;Name=C9F04_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10270;old_locus_tag=C9F04_10600
NZ_PYKF01000348.1	Protein Homology	CDS	6482	7030	.	+	0	ID=cds-WP_001517951.1;Parent=gene-C9F04_RS10270;Dbxref=Genbank:WP_001517951.1;Name=WP_001517951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9F04_RS10270;product=XRE family transcriptional regulator;protein_id=WP_001517951.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	7119	7433	.	-	.	ID=gene-C9F04_RS10275;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9F04_RS10275;old_locus_tag=C9F04_10605
NZ_PYKF01000348.1	Protein Homology	CDS	7119	7433	.	-	0	ID=cds-WP_000619477.1;Parent=gene-C9F04_RS10275;Dbxref=Genbank:WP_000619477.1;Name=WP_000619477.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9F04_RS10275;product=L-rhamnose mutarotase;protein_id=WP_000619477.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	7430	8578	.	-	.	ID=gene-C9F04_RS10280;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9F04_RS10280;old_locus_tag=C9F04_10610
NZ_PYKF01000348.1	Protein Homology	CDS	7430	8578	.	-	0	ID=cds-WP_000009253.1;Parent=gene-C9F04_RS10280;Dbxref=Genbank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9F04_RS10280;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	8705	9532	.	-	.	ID=gene-C9F04_RS10285;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9F04_RS10285;old_locus_tag=C9F04_10615
NZ_PYKF01000348.1	Protein Homology	CDS	8705	9532	.	-	0	ID=cds-WP_001179685.1;Parent=gene-C9F04_RS10285;Dbxref=Genbank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9F04_RS10285;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11
NZ_PYKF01000348.1	RefSeq	gene	9675	10594	.	-	.	ID=gene-C9F04_RS10290;Name=C9F04_RS10290;end_range=10594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10290;old_locus_tag=C9F04_10620;partial=true
NZ_PYKF01000348.1	Protein Homology	CDS	9675	10594	.	-	2	ID=cds-WP_146712596.1;Parent=gene-C9F04_RS10290;Dbxref=Genbank:WP_146712596.1;Name=WP_146712596.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;end_range=10594,.;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9F04_RS10290;partial=true;product=L-rhamnose isomerase;protein_id=WP_146712596.1;transl_table=11
##sequence-region NZ_PYKF01000237.1 1 10571
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000237.1	RefSeq	region	1	10571	.	+	.	ID=NZ_PYKF01000237.1:1..10571;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000237.1	RefSeq	gene	10	1023	.	+	.	ID=gene-C9F04_RS06330;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9F04_RS06330;old_locus_tag=C9F04_06530
NZ_PYKF01000237.1	Protein Homology	CDS	10	1023	.	+	0	ID=cds-WP_135369450.1;Parent=gene-C9F04_RS06330;Dbxref=Genbank:WP_135369450.1;Name=WP_135369450.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9F04_RS06330;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_135369450.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	1124	2422	.	-	.	ID=gene-C9F04_RS06335;Name=C9F04_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06335;old_locus_tag=C9F04_06535
NZ_PYKF01000237.1	Protein Homology	CDS	1124	2422	.	-	0	ID=cds-WP_001150175.1;Parent=gene-C9F04_RS06335;Dbxref=Genbank:WP_001150175.1;Name=WP_001150175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9F04_RS06335;product=amino acid permease;protein_id=WP_001150175.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	pseudogene	2540	2689	.	-	.	ID=gene-C9F04_RS26940;Name=C9F04_RS26940;end_range=2689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26940;partial=true;pseudo=true
NZ_PYKF01000237.1	Protein Homology	CDS	2540	2689	.	-	0	ID=cds-C9F04_RS26940;Parent=gene-C9F04_RS26940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=2689,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=C9F04_RS26940;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	3065	3172	.	+	.	ID=gene-C9F04_RS06345;Name=C9F04_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06345;old_locus_tag=C9F04_06545
NZ_PYKF01000237.1	Protein Homology	CDS	3065	3172	.	+	0	ID=cds-WP_001537650.1;Parent=gene-C9F04_RS06345;Dbxref=Genbank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9F04_RS06345;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	3254	4933	.	-	.	ID=gene-C9F04_RS06350;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F04_RS06350;old_locus_tag=C9F04_06550
NZ_PYKF01000237.1	Protein Homology	CDS	3254	4933	.	-	0	ID=cds-WP_146712423.1;Parent=gene-C9F04_RS06350;Dbxref=Genbank:WP_146712423.1;Name=WP_146712423.1;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9F04_RS06350;product=cellulose biosynthesis protein BcsG;protein_id=WP_146712423.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	4930	5121	.	-	.	ID=gene-C9F04_RS06355;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9F04_RS06355;old_locus_tag=C9F04_06555
NZ_PYKF01000237.1	Protein Homology	CDS	4930	5121	.	-	0	ID=cds-WP_000988321.1;Parent=gene-C9F04_RS06355;Dbxref=Genbank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9F04_RS06355;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	5118	6689	.	-	.	ID=gene-C9F04_RS06360;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9F04_RS06360;old_locus_tag=C9F04_06560
NZ_PYKF01000237.1	Protein Homology	CDS	5118	6689	.	-	0	ID=cds-WP_146712424.1;Parent=gene-C9F04_RS06360;Dbxref=Genbank:WP_146712424.1;Name=WP_146712424.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9F04_RS06360;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_146712424.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	6934	7137	.	+	.	ID=gene-C9F04_RS06365;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9F04_RS06365;old_locus_tag=C9F04_06565
NZ_PYKF01000237.1	Protein Homology	CDS	6934	7137	.	+	0	ID=cds-WP_000282616.1;Parent=gene-C9F04_RS06365;Dbxref=Genbank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9F04_RS06365;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	gene	7138	7890	.	+	.	ID=gene-C9F04_RS06370;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9F04_RS06370;old_locus_tag=C9F04_06570
NZ_PYKF01000237.1	Protein Homology	CDS	7138	7890	.	+	0	ID=cds-WP_000996115.1;Parent=gene-C9F04_RS06370;Dbxref=Genbank:WP_000996115.1;Name=WP_000996115.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9F04_RS06370;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996115.1;transl_table=11
NZ_PYKF01000237.1	RefSeq	pseudogene	7887	10508	.	+	.	ID=gene-C9F04_RS06375;Name=bcsA;end_range=10508,.;gbkey=Gene;gene=bcsA;gene_biotype=pseudogene;locus_tag=C9F04_RS06375;old_locus_tag=C9F04_06575;partial=true;pseudo=true
NZ_PYKF01000237.1	Protein Homology	CDS	7887	10508	.	+	0	ID=cds-C9F04_RS06375;Parent=gene-C9F04_RS06375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;end_range=10508,.;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9F04_RS06375;partial=true;product=UDP-forming cellulose synthase catalytic subunit;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000421.1 1 10557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000421.1	RefSeq	region	1	10557	.	+	.	ID=NZ_PYKF01000421.1:1..10557;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000421.1	RefSeq	gene	1	1228	.	+	.	ID=gene-C9F04_RS12485;Name=C9F04_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12485;old_locus_tag=C9F04_12905;partial=true;start_range=.,1
NZ_PYKF01000421.1	Protein Homology	CDS	1	1228	.	+	1	ID=cds-WP_186799024.1;Parent=gene-C9F04_RS12485;Dbxref=Genbank:WP_186799024.1;Name=WP_186799024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249214.1;locus_tag=C9F04_RS12485;partial=true;product=penicillin-binding protein activator;protein_id=WP_186799024.1;start_range=.,1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	1186	1581	.	+	.	ID=gene-C9F04_RS12490;Name=C9F04_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12490;old_locus_tag=C9F04_12910
NZ_PYKF01000421.1	Protein Homology	CDS	1186	1581	.	+	0	ID=cds-WP_000057285.1;Parent=gene-C9F04_RS12490;Dbxref=Genbank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9F04_RS12490;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	1603	2193	.	+	.	ID=gene-C9F04_RS12495;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9F04_RS12495;old_locus_tag=C9F04_12915
NZ_PYKF01000421.1	Protein Homology	CDS	1603	2193	.	+	0	ID=cds-WP_000893481.1;Parent=gene-C9F04_RS12495;Dbxref=Genbank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9F04_RS12495;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	2203	2778	.	+	.	ID=gene-C9F04_RS12500;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9F04_RS12500;old_locus_tag=C9F04_12920
NZ_PYKF01000421.1	Protein Homology	CDS	2203	2778	.	+	0	ID=cds-WP_000643280.1;Parent=gene-C9F04_RS12500;Dbxref=Genbank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9F04_RS12500;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	2845	3480	.	-	.	ID=gene-C9F04_RS12505;Name=C9F04_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12505;old_locus_tag=C9F04_12925
NZ_PYKF01000421.1	Protein Homology	CDS	2845	3480	.	-	0	ID=cds-WP_001537613.1;Parent=gene-C9F04_RS12505;Dbxref=Genbank:WP_001537613.1;Name=WP_001537613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9F04_RS12505;product=NAD(P)H-binding protein;protein_id=WP_001537613.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	3611	4129	.	+	.	ID=gene-C9F04_RS12510;Name=C9F04_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12510;old_locus_tag=C9F04_12930
NZ_PYKF01000421.1	Protein Homology	CDS	3611	4129	.	+	0	ID=cds-WP_146712698.1;Parent=gene-C9F04_RS12510;Dbxref=Genbank:WP_146712698.1;Name=WP_146712698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9F04_RS12510;product=type 1 glutamine amidotransferase;protein_id=WP_146712698.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	4109	4552	.	-	.	ID=gene-C9F04_RS12515;Name=C9F04_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12515;old_locus_tag=C9F04_12935
NZ_PYKF01000421.1	Protein Homology	CDS	4109	4552	.	-	0	ID=cds-WP_000380404.1;Parent=gene-C9F04_RS12515;Dbxref=Genbank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9F04_RS12515;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	4590	4907	.	+	.	ID=gene-C9F04_RS12520;Name=C9F04_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12520;old_locus_tag=C9F04_12940
NZ_PYKF01000421.1	Protein Homology	CDS	4590	4907	.	+	0	ID=cds-WP_000928379.1;Parent=gene-C9F04_RS12520;Dbxref=Genbank:WP_000928379.1;Name=WP_000928379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9F04_RS12520;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	4894	5397	.	-	.	ID=gene-C9F04_RS12525;Name=C9F04_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12525;old_locus_tag=C9F04_12945
NZ_PYKF01000421.1	Protein Homology	CDS	4894	5397	.	-	0	ID=cds-WP_000908562.1;Parent=gene-C9F04_RS12525;Dbxref=Genbank:WP_000908562.1;Name=WP_000908562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9F04_RS12525;product=N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	5391	5915	.	-	.	ID=gene-C9F04_RS12530;Name=C9F04_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12530;old_locus_tag=C9F04_12950
NZ_PYKF01000421.1	Protein Homology	CDS	5391	5915	.	-	0	ID=cds-WP_000884721.1;Parent=gene-C9F04_RS12530;Dbxref=Genbank:WP_000884721.1;Name=WP_000884721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9F04_RS12530;product=SCP2 domain-containing protein;protein_id=WP_000884721.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	6132	7127	.	+	.	ID=gene-C9F04_RS12535;Name=C9F04_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12535;old_locus_tag=C9F04_12955
NZ_PYKF01000421.1	Protein Homology	CDS	6132	7127	.	+	0	ID=cds-WP_146712699.1;Parent=gene-C9F04_RS12535;Dbxref=Genbank:WP_146712699.1;Name=WP_146712699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9F04_RS12535;product=U32 family peptidase;protein_id=WP_146712699.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	7118	8014	.	+	.	ID=gene-C9F04_RS12540;Name=C9F04_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12540;old_locus_tag=C9F04_12960
NZ_PYKF01000421.1	Protein Homology	CDS	7118	8014	.	+	0	ID=cds-WP_146712700.1;Parent=gene-C9F04_RS12540;Dbxref=Genbank:WP_146712700.1;Name=WP_146712700.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=C9F04_RS12540;product=U32 family peptidase;protein_id=WP_146712700.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	8192	9199	.	+	.	ID=gene-C9F04_RS12545;Name=C9F04_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12545;old_locus_tag=C9F04_12965
NZ_PYKF01000421.1	Protein Homology	CDS	8192	9199	.	+	0	ID=cds-WP_135369571.1;Parent=gene-C9F04_RS12545;Dbxref=Genbank:WP_135369571.1;Name=WP_135369571.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9F04_RS12545;product=luciferase-like monooxygenase;protein_id=WP_135369571.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	9177	9896	.	-	.	ID=gene-C9F04_RS12550;Name=C9F04_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12550;old_locus_tag=C9F04_12970
NZ_PYKF01000421.1	Protein Homology	CDS	9177	9896	.	-	0	ID=cds-WP_000532745.1;Parent=gene-C9F04_RS12550;Dbxref=Genbank:WP_000532745.1;Name=WP_000532745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=C9F04_RS12550;product=murein L%2CD-transpeptidase;protein_id=WP_000532745.1;transl_table=11
NZ_PYKF01000421.1	RefSeq	gene	10055	10557	.	+	.	ID=gene-C9F04_RS12555;Name=C9F04_RS12555;end_range=10557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12555;old_locus_tag=C9F04_12975;partial=true
NZ_PYKF01000421.1	Protein Homology	CDS	10055	10557	.	+	0	ID=cds-WP_146712701.1;Parent=gene-C9F04_RS12555;Dbxref=Genbank:WP_146712701.1;Name=WP_146712701.1;end_range=10557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=C9F04_RS12555;partial=true;product=cytoplasmic protein;protein_id=WP_146712701.1;transl_table=11
##sequence-region NZ_PYKF01000167.1 1 10532
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000167.1	RefSeq	region	1	10532	.	+	.	ID=NZ_PYKF01000167.1:1..10532;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000167.1	RefSeq	gene	1	1717	.	-	.	ID=gene-C9F04_RS03485;Name=C9F04_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03485;old_locus_tag=C9F04_03600;partial=true;start_range=.,1
NZ_PYKF01000167.1	Protein Homology	CDS	1	1717	.	-	0	ID=cds-WP_146712297.1;Parent=gene-C9F04_RS03485;Dbxref=Genbank:WP_146712297.1;Name=WP_146712297.1;Ontology_term=GO:0006810,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F04_RS03485;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_146712297.1;start_range=.,1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	1902	3602	.	-	.	ID=gene-C9F04_RS03490;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=C9F04_RS03490;old_locus_tag=C9F04_03605
NZ_PYKF01000167.1	Protein Homology	CDS	1902	3602	.	-	0	ID=cds-WP_135369678.1;Parent=gene-C9F04_RS03490;Dbxref=Genbank:WP_135369678.1;Name=WP_135369678.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;gene=narQ;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9F04_RS03490;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_135369678.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	3788	5749	.	+	.	ID=gene-C9F04_RS03495;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=C9F04_RS03495;old_locus_tag=C9F04_03615
NZ_PYKF01000167.1	Protein Homology	CDS	3788	5749	.	+	0	ID=cds-WP_023197974.1;Parent=gene-C9F04_RS03495;Dbxref=Genbank:WP_023197974.1;Name=WP_023197974.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9F04_RS03495;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_023197974.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	6197	7495	.	-	.	ID=gene-C9F04_RS03500;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9F04_RS03500;old_locus_tag=C9F04_03620
NZ_PYKF01000167.1	Protein Homology	CDS	6197	7495	.	-	0	ID=cds-WP_000673295.1;Parent=gene-C9F04_RS03500;Dbxref=Genbank:WP_000673295.1;Name=WP_000673295.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9F04_RS03500;product=penicillin binding protein PBP4B;protein_id=WP_000673295.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	7699	8274	.	+	.	ID=gene-C9F04_RS03505;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9F04_RS03505;old_locus_tag=C9F04_03625
NZ_PYKF01000167.1	Protein Homology	CDS	7699	8274	.	+	0	ID=cds-WP_000084037.1;Parent=gene-C9F04_RS03505;Dbxref=Genbank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9F04_RS03505;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	8399	9442	.	+	.	ID=gene-C9F04_RS03510;Name=C9F04_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03510;old_locus_tag=C9F04_03630
NZ_PYKF01000167.1	Protein Homology	CDS	8399	9442	.	+	0	ID=cds-WP_001270668.1;Parent=gene-C9F04_RS03510;Dbxref=Genbank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9F04_RS03510;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	gene	9570	9800	.	+	.	ID=gene-C9F04_RS03515;Name=C9F04_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03515;old_locus_tag=C9F04_03635
NZ_PYKF01000167.1	Protein Homology	CDS	9570	9800	.	+	0	ID=cds-WP_000700635.1;Parent=gene-C9F04_RS03515;Dbxref=Genbank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9F04_RS03515;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11
NZ_PYKF01000167.1	RefSeq	pseudogene	9863	10532	.	-	.	ID=gene-C9F04_RS03520;Name=C9F04_RS03520;end_range=10532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03520;old_locus_tag=C9F04_03640;partial=true;pseudo=true
NZ_PYKF01000167.1	Protein Homology	CDS	9863	10532	.	-	1	ID=cds-C9F04_RS03520;Parent=gene-C9F04_RS03520;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F04_RS03520;partial=true;product=transketolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000387.1 1 10477
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000387.1	RefSeq	region	1	10477	.	+	.	ID=NZ_PYKF01000387.1:1..10477;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000387.1	RefSeq	gene	45	269	.	-	.	ID=gene-C9F04_RS11375;Name=C9F04_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11375;old_locus_tag=C9F04_11755
NZ_PYKF01000387.1	Protein Homology	CDS	45	269	.	-	0	ID=cds-WP_001191666.1;Parent=gene-C9F04_RS11375;Dbxref=Genbank:WP_001191666.1;Name=WP_001191666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=C9F04_RS11375;product=helix-turn-helix transcriptional regulator;protein_id=WP_001191666.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	367	1062	.	+	.	ID=gene-C9F04_RS11385;Name=C9F04_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11385;old_locus_tag=C9F04_11765
NZ_PYKF01000387.1	Protein Homology	CDS	367	1062	.	+	0	ID=cds-WP_001020640.1;Parent=gene-C9F04_RS11385;Dbxref=Genbank:WP_001020640.1;Name=WP_001020640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=C9F04_RS11385;product=helix-turn-helix transcriptional regulator;protein_id=WP_001020640.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	pseudogene	1533	1652	.	+	.	ID=gene-C9F04_RS27025;Name=C9F04_RS27025;end_range=1652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27025;partial=true;pseudo=true
NZ_PYKF01000387.1	Protein Homology	CDS	1533	1652	.	+	0	ID=cds-C9F04_RS27025;Parent=gene-C9F04_RS27025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518763.1;locus_tag=C9F04_RS27025;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	1876	2247	.	+	.	ID=gene-C9F04_RS11390;Name=C9F04_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11390;old_locus_tag=C9F04_11775
NZ_PYKF01000387.1	Protein Homology	CDS	1876	2247	.	+	0	ID=cds-WP_146712651.1;Parent=gene-C9F04_RS11390;Dbxref=Genbank:WP_146712651.1;Name=WP_146712651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=C9F04_RS11390;product=hypothetical protein;protein_id=WP_146712651.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	2305	3132	.	+	.	ID=gene-C9F04_RS11395;Name=C9F04_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11395;old_locus_tag=C9F04_11780
NZ_PYKF01000387.1	Protein Homology	CDS	2305	3132	.	+	0	ID=cds-WP_000080410.1;Parent=gene-C9F04_RS11395;Dbxref=Genbank:WP_000080410.1;Name=WP_000080410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=C9F04_RS11395;product=DUF2303 family protein;protein_id=WP_000080410.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	3269	3808	.	+	.	ID=gene-C9F04_RS11400;Name=C9F04_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11400;old_locus_tag=C9F04_11785
NZ_PYKF01000387.1	Protein Homology	CDS	3269	3808	.	+	0	ID=cds-WP_000008352.1;Parent=gene-C9F04_RS11400;Dbxref=Genbank:WP_000008352.1;Name=WP_000008352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120458.1;locus_tag=C9F04_RS11400;product=hypothetical protein;protein_id=WP_000008352.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	3952	4188	.	+	.	ID=gene-C9F04_RS11405;Name=C9F04_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11405;old_locus_tag=C9F04_11790
NZ_PYKF01000387.1	Protein Homology	CDS	3952	4188	.	+	0	ID=cds-WP_000089141.1;Parent=gene-C9F04_RS11405;Dbxref=Genbank:WP_000089141.1;Name=WP_000089141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=C9F04_RS11405;product=excisionase;protein_id=WP_000089141.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	4178	5320	.	+	.	ID=gene-C9F04_RS11410;Name=C9F04_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11410;old_locus_tag=C9F04_11795
NZ_PYKF01000387.1	Protein Homology	CDS	4178	5320	.	+	0	ID=cds-WP_000741325.1;Parent=gene-C9F04_RS11410;Dbxref=Genbank:WP_000741325.1;Name=WP_000741325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=C9F04_RS11410;product=site-specific integrase;protein_id=WP_000741325.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	5434	6684	.	-	.	ID=gene-C9F04_RS11415;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9F04_RS11415;old_locus_tag=C9F04_11800
NZ_PYKF01000387.1	Protein Homology	CDS	5434	6684	.	-	0	ID=cds-WP_146712650.1;Parent=gene-C9F04_RS11415;Dbxref=Genbank:WP_146712650.1;Name=WP_146712650.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F04_RS11415;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_146712650.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	6856	7521	.	+	.	ID=gene-C9F04_RS11420;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9F04_RS11420;old_locus_tag=C9F04_11805
NZ_PYKF01000387.1	Protein Homology	CDS	6856	7521	.	+	0	ID=cds-WP_001249412.1;Parent=gene-C9F04_RS11420;Dbxref=Genbank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9F04_RS11420;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	7518	7847	.	+	.	ID=gene-C9F04_RS11425;Name=C9F04_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11425;old_locus_tag=C9F04_11810
NZ_PYKF01000387.1	Protein Homology	CDS	7518	7847	.	+	0	ID=cds-WP_000825956.1;Parent=gene-C9F04_RS11425;Dbxref=Genbank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9F04_RS11425;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	7859	8320	.	+	.	ID=gene-C9F04_RS11430;Name=C9F04_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11430;old_locus_tag=C9F04_11815
NZ_PYKF01000387.1	Protein Homology	CDS	7859	8320	.	+	0	ID=cds-WP_000476064.1;Parent=gene-C9F04_RS11430;Dbxref=Genbank:WP_000476064.1;Name=WP_000476064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9F04_RS11430;product=NUDIX hydrolase;protein_id=WP_000476064.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	8374	9480	.	+	.	ID=gene-C9F04_RS11435;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=C9F04_RS11435;old_locus_tag=C9F04_11820
NZ_PYKF01000387.1	Protein Homology	CDS	8374	9480	.	+	0	ID=cds-WP_135369294.1;Parent=gene-C9F04_RS11435;Dbxref=Genbank:WP_135369294.1;Name=WP_135369294.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9F04_RS11435;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_135369294.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	9567	10208	.	+	.	ID=gene-C9F04_RS11440;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9F04_RS11440;old_locus_tag=C9F04_11825
NZ_PYKF01000387.1	Protein Homology	CDS	9567	10208	.	+	0	ID=cds-WP_001519653.1;Parent=gene-C9F04_RS11440;Dbxref=Genbank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9F04_RS11440;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11
NZ_PYKF01000387.1	RefSeq	gene	10212	10477	.	+	.	ID=gene-C9F04_RS11445;Name=C9F04_RS11445;end_range=10477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11445;old_locus_tag=C9F04_11830;partial=true
NZ_PYKF01000387.1	Protein Homology	CDS	10212	10477	.	+	0	ID=cds-WP_261770944.1;Parent=gene-C9F04_RS11445;Dbxref=Genbank:WP_261770944.1;Name=WP_261770944.1;end_range=10477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9F04_RS11445;partial=true;product=lyase family protein;protein_id=WP_261770944.1;transl_table=11
##sequence-region NZ_PYKF01000282.1 1 10466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000282.1	RefSeq	region	1	10466	.	+	.	ID=NZ_PYKF01000282.1:1..10466;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000282.1	RefSeq	gene	7	174	.	+	.	ID=gene-C9F04_RS26575;Name=C9F04_RS26575;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS26575
NZ_PYKF01000282.1	cmsearch	ncRNA	7	174	.	+	.	ID=rna-C9F04_RS26575;Parent=gene-C9F04_RS26575;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS26575;product=RtT sRNA
NZ_PYKF01000282.1	cmsearch	exon	7	174	.	+	.	ID=exon-C9F04_RS26575-1;Parent=rna-C9F04_RS26575;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS26575;product=RtT sRNA
NZ_PYKF01000282.1	RefSeq	gene	218	293	.	+	.	ID=gene-C9F04_RS08105;Name=C9F04_RS08105;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS08105;old_locus_tag=C9F04_08375
NZ_PYKF01000282.1	tRNAscan-SE	tRNA	218	293	.	+	.	ID=rna-C9F04_RS08105;Parent=gene-C9F04_RS08105;anticodon=(pos:251..253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS08105;product=tRNA-Lys
NZ_PYKF01000282.1	tRNAscan-SE	exon	218	293	.	+	.	ID=exon-C9F04_RS08105-1;Parent=rna-C9F04_RS08105;anticodon=(pos:251..253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS08105;product=tRNA-Lys
NZ_PYKF01000282.1	RefSeq	gene	742	1785	.	+	.	ID=gene-C9F04_RS08110;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9F04_RS08110;old_locus_tag=C9F04_08385
NZ_PYKF01000282.1	Protein Homology	CDS	742	1785	.	+	0	ID=cds-WP_135369336.1;Parent=gene-C9F04_RS08110;Dbxref=Genbank:WP_135369336.1;Name=WP_135369336.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F04_RS08110;product=quinolinate synthase NadA;protein_id=WP_135369336.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	1810	2529	.	+	.	ID=gene-C9F04_RS08115;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9F04_RS08115;old_locus_tag=C9F04_08390
NZ_PYKF01000282.1	Protein Homology	CDS	1810	2529	.	+	0	ID=cds-WP_000345361.1;Parent=gene-C9F04_RS08115;Dbxref=Genbank:WP_000345361.1;Name=WP_000345361.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9F04_RS08115;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345361.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	2526	3464	.	-	.	ID=gene-C9F04_RS08120;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9F04_RS08120;old_locus_tag=C9F04_08395
NZ_PYKF01000282.1	Protein Homology	CDS	2526	3464	.	-	0	ID=cds-WP_000951250.1;Parent=gene-C9F04_RS08120;Dbxref=Genbank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016021;gbkey=CDS;gene=zitB;go_component=integral component of membrane|0016021||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9F04_RS08120;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	3575	3961	.	-	.	ID=gene-C9F04_RS08125;Name=C9F04_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08125;old_locus_tag=C9F04_08400
NZ_PYKF01000282.1	Protein Homology	CDS	3575	3961	.	-	0	ID=cds-WP_080193232.1;Parent=gene-C9F04_RS08125;Dbxref=Genbank:WP_080193232.1;Name=WP_080193232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9F04_RS08125;product=YbgS-like family protein;protein_id=WP_080193232.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	pseudogene	4281	5333	.	+	.	ID=gene-C9F04_RS08130;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=C9F04_RS08130;old_locus_tag=C9F04_08405;pseudo=true
NZ_PYKF01000282.1	Protein Homology	CDS	4281	5333	.	+	0	ID=cds-C9F04_RS08130;Parent=gene-C9F04_RS08130;Note=internal stop;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9F04_RS08130;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	5427	5972	.	-	.	ID=gene-C9F04_RS08135;Name=C9F04_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08135;old_locus_tag=C9F04_08410
NZ_PYKF01000282.1	Protein Homology	CDS	5427	5972	.	-	0	ID=cds-WP_000970374.1;Parent=gene-C9F04_RS08135;Dbxref=Genbank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9F04_RS08135;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	5987	6832	.	-	.	ID=gene-C9F04_RS08140;Name=C9F04_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08140;old_locus_tag=C9F04_08415
NZ_PYKF01000282.1	Protein Homology	CDS	5987	6832	.	-	0	ID=cds-WP_000086831.1;Parent=gene-C9F04_RS08140;Dbxref=Genbank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9F04_RS08140;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	6962	7852	.	+	.	ID=gene-C9F04_RS08145;Name=C9F04_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08145;old_locus_tag=C9F04_08420
NZ_PYKF01000282.1	Protein Homology	CDS	6962	7852	.	+	0	ID=cds-WP_000405927.1;Parent=gene-C9F04_RS08145;Dbxref=Genbank:WP_000405927.1;Name=WP_000405927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9F04_RS08145;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	7853	8836	.	-	.	ID=gene-C9F04_RS08150;Name=C9F04_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08150;old_locus_tag=C9F04_08425
NZ_PYKF01000282.1	Protein Homology	CDS	7853	8836	.	-	0	ID=cds-WP_000282119.1;Parent=gene-C9F04_RS08150;Dbxref=Genbank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9F04_RS08150;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	gene	9059	10327	.	+	.	ID=gene-C9F04_RS08155;Name=C9F04_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08155;old_locus_tag=C9F04_08430
NZ_PYKF01000282.1	Protein Homology	CDS	9059	10327	.	+	0	ID=cds-WP_023193244.1;Parent=gene-C9F04_RS08155;Dbxref=Genbank:WP_023193244.1;Name=WP_023193244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9F04_RS08155;product=SLC13 family permease;protein_id=WP_023193244.1;transl_table=11
NZ_PYKF01000282.1	RefSeq	pseudogene	10377	10466	.	+	.	ID=gene-C9F04_RS08160;Name=C9F04_RS08160;end_range=10466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08160;old_locus_tag=C9F04_08435;partial=true;pseudo=true
NZ_PYKF01000282.1	Protein Homology	CDS	10377	10466	.	+	0	ID=cds-C9F04_RS08160;Parent=gene-C9F04_RS08160;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9F04_RS08160;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000408.1 1 10413
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000408.1	RefSeq	region	1	10413	.	+	.	ID=NZ_PYKF01000408.1:1..10413;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000408.1	RefSeq	gene	1	1067	.	-	.	ID=gene-C9F04_RS12050;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9F04_RS12050;old_locus_tag=C9F04_12465;partial=true;start_range=.,1
NZ_PYKF01000408.1	Protein Homology	CDS	1	1067	.	-	0	ID=cds-WP_146712681.1;Parent=gene-C9F04_RS12050;Dbxref=Genbank:WP_146712681.1;Name=WP_146712681.1;Ontology_term=GO:0015860,GO:0015211,GO:0016021;gbkey=CDS;gene=nepI;go_component=integral component of membrane|0016021||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9F04_RS12050;partial=true;product=purine ribonucleoside efflux pump NepI;protein_id=WP_146712681.1;start_range=.,1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	1283	1642	.	+	.	ID=gene-C9F04_RS12055;Name=C9F04_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12055;old_locus_tag=C9F04_12470
NZ_PYKF01000408.1	Protein Homology	CDS	1283	1642	.	+	0	ID=cds-WP_001217956.1;Parent=gene-C9F04_RS12055;Dbxref=Genbank:WP_001217956.1;Name=WP_001217956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9F04_RS12055;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217956.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	1626	1949	.	+	.	ID=gene-C9F04_RS12060;Name=C9F04_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12060;old_locus_tag=C9F04_12475
NZ_PYKF01000408.1	Protein Homology	CDS	1626	1949	.	+	0	ID=cds-WP_001274841.1;Parent=gene-C9F04_RS12060;Dbxref=Genbank:WP_001274841.1;Name=WP_001274841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9F04_RS12060;product=DNA-binding transcriptional regulator;protein_id=WP_001274841.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	2040	2309	.	-	.	ID=gene-C9F04_RS12065;Name=C9F04_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12065;old_locus_tag=C9F04_12480
NZ_PYKF01000408.1	Protein Homology	CDS	2040	2309	.	-	0	ID=cds-WP_135369756.1;Parent=gene-C9F04_RS12065;Dbxref=Genbank:WP_135369756.1;Name=WP_135369756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9F04_RS12065;product=HPr family phosphocarrier protein;protein_id=WP_135369756.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	2319	3179	.	-	.	ID=gene-C9F04_RS12070;Name=C9F04_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12070;old_locus_tag=C9F04_12485
NZ_PYKF01000408.1	Protein Homology	CDS	2319	3179	.	-	0	ID=cds-WP_001131802.1;Parent=gene-C9F04_RS12070;Dbxref=Genbank:WP_001131802.1;Name=WP_001131802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F04_RS12070;product=class II aldolase;protein_id=WP_001131802.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	3242	4726	.	-	.	ID=gene-C9F04_RS12075;Name=C9F04_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12075;old_locus_tag=C9F04_12490
NZ_PYKF01000408.1	Protein Homology	CDS	3242	4726	.	-	0	ID=cds-WP_146712682.1;Parent=gene-C9F04_RS12075;Dbxref=Genbank:WP_146712682.1;Name=WP_146712682.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9F04_RS12075;product=FGGY family carbohydrate kinase;protein_id=WP_146712682.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	4719	6077	.	-	.	ID=gene-C9F04_RS12080;Name=C9F04_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12080;old_locus_tag=C9F04_12495
NZ_PYKF01000408.1	Protein Homology	CDS	4719	6077	.	-	0	ID=cds-WP_000997824.1;Parent=gene-C9F04_RS12080;Dbxref=Genbank:WP_000997824.1;Name=WP_000997824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9F04_RS12080;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997824.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	6153	6440	.	-	.	ID=gene-C9F04_RS12085;Name=C9F04_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12085;old_locus_tag=C9F04_12500
NZ_PYKF01000408.1	Protein Homology	CDS	6153	6440	.	-	0	ID=cds-WP_000041396.1;Parent=gene-C9F04_RS12085;Dbxref=Genbank:WP_000041396.1;Name=WP_000041396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9F04_RS12085;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	6437	6910	.	-	.	ID=gene-C9F04_RS12090;Name=C9F04_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12090;old_locus_tag=C9F04_12505
NZ_PYKF01000408.1	Protein Homology	CDS	6437	6910	.	-	0	ID=cds-WP_001152234.1;Parent=gene-C9F04_RS12090;Dbxref=Genbank:WP_001152234.1;Name=WP_001152234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9F04_RS12090;product=PTS sugar transporter subunit IIA;protein_id=WP_001152234.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	6928	7671	.	-	.	ID=gene-C9F04_RS12095;Name=C9F04_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12095;old_locus_tag=C9F04_12510
NZ_PYKF01000408.1	Protein Homology	CDS	6928	7671	.	-	0	ID=cds-WP_135369754.1;Parent=gene-C9F04_RS12095;Dbxref=Genbank:WP_135369754.1;Name=WP_135369754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9F04_RS12095;product=GntR family transcriptional regulator;protein_id=WP_135369754.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	8024	8476	.	-	.	ID=gene-C9F04_RS12100;Name=C9F04_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12100;old_locus_tag=C9F04_12515
NZ_PYKF01000408.1	Protein Homology	CDS	8024	8476	.	-	0	ID=cds-WP_001519640.1;Parent=gene-C9F04_RS12100;Dbxref=Genbank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9F04_RS12100;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	gene	8669	10060	.	-	.	ID=gene-C9F04_RS12105;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9F04_RS12105;old_locus_tag=C9F04_12520
NZ_PYKF01000408.1	Protein Homology	CDS	8669	10060	.	-	0	ID=cds-WP_000879181.1;Parent=gene-C9F04_RS12105;Dbxref=Genbank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9F04_RS12105;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11
NZ_PYKF01000408.1	RefSeq	pseudogene	10203	10413	.	-	.	ID=gene-C9F04_RS12110;Name=C9F04_RS12110;end_range=10413,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12110;old_locus_tag=C9F04_12525;partial=true;pseudo=true
NZ_PYKF01000408.1	Protein Homology	CDS	10203	10413	.	-	1	ID=cds-C9F04_RS12110;Parent=gene-C9F04_RS12110;Note=membrane protein regulates uhpT expression%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9F04_RS12110;partial=true;product=MFS transporter family glucose-6-phosphate receptor UhpC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000339.1 1 26739
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000339.1	RefSeq	region	1	26739	.	+	.	ID=NZ_PYKF01000339.1:1..26739;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000339.1	RefSeq	pseudogene	1	702	.	+	.	ID=gene-C9F04_RS09855;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=pseudogene;locus_tag=C9F04_RS09855;old_locus_tag=C9F04_10170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000339.1	Protein Homology	CDS	1	702	.	+	0	ID=cds-C9F04_RS09855;Parent=gene-C9F04_RS09855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9F04_RS09855;partial=true;product=lysine decarboxylase CadA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	758	2218	.	+	.	ID=gene-C9F04_RS09860;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=C9F04_RS09860;old_locus_tag=C9F04_10175
NZ_PYKF01000339.1	Protein Homology	CDS	758	2218	.	+	0	ID=cds-WP_000856793.1;Parent=gene-C9F04_RS09860;Dbxref=Genbank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9F04_RS09860;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	2267	2605	.	-	.	ID=gene-C9F04_RS09865;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9F04_RS09865;old_locus_tag=C9F04_10180
NZ_PYKF01000339.1	Protein Homology	CDS	2267	2605	.	-	0	ID=cds-WP_000717694.1;Parent=gene-C9F04_RS09865;Dbxref=Genbank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9F04_RS09865;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	2682	4019	.	-	.	ID=gene-C9F04_RS09870;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9F04_RS09870;old_locus_tag=C9F04_10185
NZ_PYKF01000339.1	Protein Homology	CDS	2682	4019	.	-	0	ID=cds-WP_146712574.1;Parent=gene-C9F04_RS09870;Dbxref=Genbank:WP_146712574.1;Name=WP_146712574.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=C9F04_RS09870;product=two-component system response regulator GlrR;protein_id=WP_146712574.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	4016	4780	.	-	.	ID=gene-C9F04_RS09875;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9F04_RS09875;old_locus_tag=C9F04_10190
NZ_PYKF01000339.1	Protein Homology	CDS	4016	4780	.	-	0	ID=cds-WP_135369556.1;Parent=gene-C9F04_RS09875;Dbxref=Genbank:WP_135369556.1;Name=WP_135369556.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9F04_RS09875;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_135369556.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	4782	6212	.	-	.	ID=gene-C9F04_RS09880;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9F04_RS09880;old_locus_tag=C9F04_10195
NZ_PYKF01000339.1	Protein Homology	CDS	4782	6212	.	-	0	ID=cds-WP_001670672.1;Parent=gene-C9F04_RS09880;Dbxref=Genbank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9F04_RS09880;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	6862	10749	.	-	.	ID=gene-C9F04_RS09885;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9F04_RS09885;old_locus_tag=C9F04_10200
NZ_PYKF01000339.1	Protein Homology	CDS	6862	10749	.	-	0	ID=cds-WP_146712575.1;Parent=gene-C9F04_RS09885;Dbxref=Genbank:WP_146712575.1;Name=WP_146712575.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9F04_RS09885;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_146712575.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	10774	11004	.	+	.	ID=gene-C9F04_RS09890;Name=C9F04_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09890;old_locus_tag=C9F04_10205
NZ_PYKF01000339.1	Protein Homology	CDS	10774	11004	.	+	0	ID=cds-WP_001667771.1;Parent=gene-C9F04_RS09890;Dbxref=Genbank:WP_001667771.1;Name=WP_001667771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9F04_RS09890;product=hypothetical protein;protein_id=WP_001667771.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	11005	12549	.	+	.	ID=gene-C9F04_RS09895;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9F04_RS09895;old_locus_tag=C9F04_10210
NZ_PYKF01000339.1	Protein Homology	CDS	11005	12549	.	+	0	ID=cds-WP_000734249.1;Parent=gene-C9F04_RS09895;Dbxref=Genbank:WP_000734249.1;Name=WP_000734249.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F04_RS09895;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734249.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	12600	13151	.	-	.	ID=gene-C9F04_RS09900;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9F04_RS09900;old_locus_tag=C9F04_10215
NZ_PYKF01000339.1	Protein Homology	CDS	12600	13151	.	-	0	ID=cds-WP_001134566.1;Parent=gene-C9F04_RS09900;Dbxref=Genbank:WP_001134566.1;Name=WP_001134566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9F04_RS09900;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	13176	13811	.	-	.	ID=gene-C9F04_RS09905;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=C9F04_RS09905;old_locus_tag=C9F04_10220
NZ_PYKF01000339.1	Protein Homology	CDS	13176	13811	.	-	0	ID=cds-WP_000253558.1;Parent=gene-C9F04_RS09905;Dbxref=Genbank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9F04_RS09905;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	13815	15176	.	-	.	ID=gene-C9F04_RS09910;Name=C9F04_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09910;old_locus_tag=C9F04_10225
NZ_PYKF01000339.1	Protein Homology	CDS	13815	15176	.	-	0	ID=cds-WP_000361660.1;Parent=gene-C9F04_RS09910;Dbxref=Genbank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9F04_RS09910;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	15187	16080	.	-	.	ID=gene-C9F04_RS09915;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9F04_RS09915;old_locus_tag=C9F04_10230
NZ_PYKF01000339.1	Protein Homology	CDS	15187	16080	.	-	0	ID=cds-WP_061582385.1;Parent=gene-C9F04_RS09915;Dbxref=Genbank:WP_061582385.1;Name=WP_061582385.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9F04_RS09915;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_061582385.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	16196	17044	.	+	.	ID=gene-C9F04_RS09920;Name=C9F04_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09920;old_locus_tag=C9F04_10235
NZ_PYKF01000339.1	Protein Homology	CDS	16196	17044	.	+	0	ID=cds-WP_146712576.1;Parent=gene-C9F04_RS09920;Dbxref=Genbank:WP_146712576.1;Name=WP_146712576.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9F04_RS09920;product=MurR/RpiR family transcriptional regulator;protein_id=WP_146712576.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	17083	18000	.	-	.	ID=gene-C9F04_RS09925;Name=C9F04_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09925;old_locus_tag=C9F04_10240
NZ_PYKF01000339.1	Protein Homology	CDS	17083	18000	.	-	0	ID=cds-WP_000684022.1;Parent=gene-C9F04_RS09925;Dbxref=Genbank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9F04_RS09925;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	18022	19218	.	-	.	ID=gene-C9F04_RS09930;Name=C9F04_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09930;old_locus_tag=C9F04_10245
NZ_PYKF01000339.1	Protein Homology	CDS	18022	19218	.	-	0	ID=cds-WP_001276364.1;Parent=gene-C9F04_RS09930;Dbxref=Genbank:WP_001276364.1;Name=WP_001276364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9F04_RS09930;product=OFA family MFS transporter;protein_id=WP_001276364.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	19334	20260	.	+	.	ID=gene-C9F04_RS09935;Name=C9F04_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09935;old_locus_tag=C9F04_10250
NZ_PYKF01000339.1	Protein Homology	CDS	19334	20260	.	+	0	ID=cds-WP_001022463.1;Parent=gene-C9F04_RS09935;Dbxref=Genbank:WP_001022463.1;Name=WP_001022463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9F04_RS09935;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	20298	20558	.	+	.	ID=gene-C9F04_RS09940;Name=C9F04_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09940;old_locus_tag=C9F04_10255
NZ_PYKF01000339.1	Protein Homology	CDS	20298	20558	.	+	0	ID=cds-WP_001196290.1;Parent=gene-C9F04_RS09940;Dbxref=Genbank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9F04_RS09940;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	20670	21050	.	-	.	ID=gene-C9F04_RS09945;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9F04_RS09945;old_locus_tag=C9F04_10260
NZ_PYKF01000339.1	Protein Homology	CDS	20670	21050	.	-	0	ID=cds-WP_146712577.1;Parent=gene-C9F04_RS09945;Dbxref=Genbank:WP_146712577.1;Name=WP_146712577.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9F04_RS09945;product=holo-ACP synthase;protein_id=WP_146712577.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	21050	21781	.	-	.	ID=gene-C9F04_RS09950;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9F04_RS09950;old_locus_tag=C9F04_10265
NZ_PYKF01000339.1	Protein Homology	CDS	21050	21781	.	-	0	ID=cds-WP_146712578.1;Parent=gene-C9F04_RS09950;Dbxref=Genbank:WP_146712578.1;Name=WP_146712578.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9F04_RS09950;product=pyridoxine 5'-phosphate synthase;protein_id=WP_146712578.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	21793	22521	.	-	.	ID=gene-C9F04_RS09955;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9F04_RS09955;old_locus_tag=C9F04_10270
NZ_PYKF01000339.1	Protein Homology	CDS	21793	22521	.	-	0	ID=cds-WP_000399380.1;Parent=gene-C9F04_RS09955;Dbxref=Genbank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9F04_RS09955;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	22533	23438	.	-	.	ID=gene-C9F04_RS09960;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9F04_RS09960;old_locus_tag=C9F04_10275
NZ_PYKF01000339.1	Protein Homology	CDS	22533	23438	.	-	0	ID=cds-WP_000102230.1;Parent=gene-C9F04_RS09960;Dbxref=Genbank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9F04_RS09960;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	23435	24115	.	-	.	ID=gene-C9F04_RS09965;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9F04_RS09965;old_locus_tag=C9F04_10280
NZ_PYKF01000339.1	Protein Homology	CDS	23435	24115	.	-	0	ID=cds-WP_001068341.1;Parent=gene-C9F04_RS09965;Dbxref=Genbank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9F04_RS09965;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	24389	25363	.	-	.	ID=gene-C9F04_RS09970;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9F04_RS09970;old_locus_tag=C9F04_10290
NZ_PYKF01000339.1	Protein Homology	CDS	24389	25363	.	-	0	ID=cds-WP_000002559.1;Parent=gene-C9F04_RS09970;Dbxref=Genbank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9F04_RS09970;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11
NZ_PYKF01000339.1	RefSeq	gene	25380	26739	.	-	.	ID=gene-C9F04_RS09975;Name=lepA;end_range=26739,.;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9F04_RS09975;old_locus_tag=C9F04_10295;partial=true
NZ_PYKF01000339.1	Protein Homology	CDS	25380	26739	.	-	1	ID=cds-WP_146712579.1;Parent=gene-C9F04_RS09975;Dbxref=Genbank:WP_146712579.1;Name=WP_146712579.1;Ontology_term=GO:0003924,GO:0005525;end_range=26739,.;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9F04_RS09975;partial=true;product=translation elongation factor 4;protein_id=WP_146712579.1;transl_table=11
##sequence-region NZ_PYKF01000599.1 1 10387
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000599.1	RefSeq	region	1	10387	.	+	.	ID=NZ_PYKF01000599.1:1..10387;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000599.1	RefSeq	pseudogene	1	261	.	+	.	ID=gene-C9F04_RS17850;Name=C9F04_RS17850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17850;old_locus_tag=C9F04_18415;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000599.1	Protein Homology	CDS	1	261	.	+	0	ID=cds-C9F04_RS17850;Parent=gene-C9F04_RS17850;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9F04_RS17850;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	347	3004	.	+	.	ID=gene-C9F04_RS17855;Name=C9F04_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17855;old_locus_tag=C9F04_18420
NZ_PYKF01000599.1	Protein Homology	CDS	347	3004	.	+	0	ID=cds-WP_146712969.1;Parent=gene-C9F04_RS17855;Dbxref=Genbank:WP_146712969.1;Name=WP_146712969.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9F04_RS17855;product=outer membrane usher protein;protein_id=WP_146712969.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	3022	3774	.	+	.	ID=gene-C9F04_RS17860;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9F04_RS17860;old_locus_tag=C9F04_18425
NZ_PYKF01000599.1	Protein Homology	CDS	3022	3774	.	+	0	ID=cds-WP_135369498.1;Parent=gene-C9F04_RS17860;Dbxref=Genbank:WP_135369498.1;Name=WP_135369498.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9F04_RS17860;product=fimbrial chaperone StfD;protein_id=WP_135369498.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	3793	4305	.	+	.	ID=gene-C9F04_RS17865;Name=C9F04_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17865;old_locus_tag=C9F04_18430
NZ_PYKF01000599.1	Protein Homology	CDS	3793	4305	.	+	0	ID=cds-WP_001250313.1;Parent=gene-C9F04_RS17865;Dbxref=Genbank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9F04_RS17865;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	4302	4778	.	+	.	ID=gene-C9F04_RS17870;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9F04_RS17870;old_locus_tag=C9F04_18435
NZ_PYKF01000599.1	Protein Homology	CDS	4302	4778	.	+	0	ID=cds-WP_000725074.1;Parent=gene-C9F04_RS17870;Dbxref=Genbank:WP_000725074.1;Name=WP_000725074.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9F04_RS17870;product=fimbrial minor subunit StfF;protein_id=WP_000725074.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	4778	5308	.	+	.	ID=gene-C9F04_RS17875;Name=C9F04_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17875;old_locus_tag=C9F04_18440
NZ_PYKF01000599.1	Protein Homology	CDS	4778	5308	.	+	0	ID=cds-WP_001129312.1;Parent=gene-C9F04_RS17875;Dbxref=Genbank:WP_001129312.1;Name=WP_001129312.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9F04_RS17875;product=fimbrial protein;protein_id=WP_001129312.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	5308	6147	.	+	.	ID=gene-C9F04_RS17880;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9F04_RS17880;old_locus_tag=C9F04_18445
NZ_PYKF01000599.1	Protein Homology	CDS	5308	6147	.	+	0	ID=cds-WP_135369499.1;Parent=gene-C9F04_RS17880;Dbxref=Genbank:WP_135369499.1;Name=WP_135369499.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9F04_RS17880;product=fimbrial adhesin StfH;protein_id=WP_135369499.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	6255	7535	.	-	.	ID=gene-C9F04_RS17885;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9F04_RS17885;old_locus_tag=C9F04_18450
NZ_PYKF01000599.1	Protein Homology	CDS	6255	7535	.	-	0	ID=cds-WP_135369500.1;Parent=gene-C9F04_RS17885;Dbxref=Genbank:WP_135369500.1;Name=WP_135369500.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F04_RS17885;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_135369500.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	7705	9126	.	+	.	ID=gene-C9F04_RS17890;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9F04_RS17890;old_locus_tag=C9F04_18455
NZ_PYKF01000599.1	Protein Homology	CDS	7705	9126	.	+	0	ID=cds-WP_146712970.1;Parent=gene-C9F04_RS17890;Dbxref=Genbank:WP_146712970.1;Name=WP_146712970.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005887;gbkey=CDS;gene=clcA;go_component=integral component of plasma membrane|0005887||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9F04_RS17890;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_146712970.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	9208	9552	.	+	.	ID=gene-C9F04_RS17895;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9F04_RS17895;old_locus_tag=C9F04_18460
NZ_PYKF01000599.1	Protein Homology	CDS	9208	9552	.	+	0	ID=cds-WP_001278668.1;Parent=gene-C9F04_RS17895;Dbxref=Genbank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9F04_RS17895;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	9653	10276	.	-	.	ID=gene-C9F04_RS17900;Name=C9F04_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17900;old_locus_tag=C9F04_18465
NZ_PYKF01000599.1	Protein Homology	CDS	9653	10276	.	-	0	ID=cds-WP_146712971.1;Parent=gene-C9F04_RS17900;Dbxref=Genbank:WP_146712971.1;Name=WP_146712971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9F04_RS17900;product=TRIC cation channel family protein;protein_id=WP_146712971.1;transl_table=11
NZ_PYKF01000599.1	RefSeq	gene	10313	10387	.	-	.	ID=gene-C9F04_RS27150;Name=C9F04_RS27150;end_range=10387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27150;partial=true
NZ_PYKF01000599.1	Protein Homology	CDS	10313	10387	.	-	0	ID=cds-WP_261771342.1;Parent=gene-C9F04_RS27150;Dbxref=Genbank:WP_261771342.1;Name=WP_261771342.1;end_range=10387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9F04_RS27150;partial=true;product=hypothetical protein;protein_id=WP_261771342.1;transl_table=11
##sequence-region NZ_PYKF01000399.1 1 10355
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000399.1	RefSeq	region	1	10355	.	+	.	ID=NZ_PYKF01000399.1:1..10355;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000399.1	RefSeq	gene	201	2138	.	+	.	ID=gene-C9F04_RS11810;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=C9F04_RS11810;old_locus_tag=C9F04_12220
NZ_PYKF01000399.1	Protein Homology	CDS	201	2138	.	+	0	ID=cds-WP_135369225.1;Parent=gene-C9F04_RS11810;Dbxref=Genbank:WP_135369225.1;Name=WP_135369225.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=C9F04_RS11810;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_135369225.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	2199	3365	.	+	.	ID=gene-C9F04_RS11815;Name=C9F04_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11815;old_locus_tag=C9F04_12225
NZ_PYKF01000399.1	Protein Homology	CDS	2199	3365	.	+	0	ID=cds-WP_001111174.1;Parent=gene-C9F04_RS11815;Dbxref=Genbank:WP_001111174.1;Name=WP_001111174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9F04_RS11815;product=MFS transporter;protein_id=WP_001111174.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	3362	4195	.	-	.	ID=gene-C9F04_RS11820;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=C9F04_RS11820;old_locus_tag=C9F04_12230
NZ_PYKF01000399.1	Protein Homology	CDS	3362	4195	.	-	0	ID=cds-WP_023224154.1;Parent=gene-C9F04_RS11820;Dbxref=Genbank:WP_023224154.1;Name=WP_023224154.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=C9F04_RS11820;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_023224154.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	4196	5539	.	-	.	ID=gene-C9F04_RS11825;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=C9F04_RS11825;old_locus_tag=C9F04_12235
NZ_PYKF01000399.1	Protein Homology	CDS	4196	5539	.	-	0	ID=cds-WP_146712666.1;Parent=gene-C9F04_RS11825;Dbxref=Genbank:WP_146712666.1;Name=WP_146712666.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=C9F04_RS11825;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_146712666.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	5637	6647	.	-	.	ID=gene-C9F04_RS11830;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=C9F04_RS11830;old_locus_tag=C9F04_12240
NZ_PYKF01000399.1	Protein Homology	CDS	5637	6647	.	-	0	ID=cds-WP_000172704.1;Parent=gene-C9F04_RS11830;Dbxref=Genbank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=C9F04_RS11830;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	6666	7586	.	-	.	ID=gene-C9F04_RS11835;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=C9F04_RS11835;old_locus_tag=C9F04_12245
NZ_PYKF01000399.1	Protein Homology	CDS	6666	7586	.	-	0	ID=cds-WP_012601329.1;Parent=gene-C9F04_RS11835;Dbxref=Genbank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=C9F04_RS11835;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	7846	8670	.	-	.	ID=gene-C9F04_RS11840;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=C9F04_RS11840;old_locus_tag=C9F04_12250
NZ_PYKF01000399.1	Protein Homology	CDS	7846	8670	.	-	0	ID=cds-WP_000332219.1;Parent=gene-C9F04_RS11840;Dbxref=Genbank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=C9F04_RS11840;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11
NZ_PYKF01000399.1	RefSeq	pseudogene	8793	9095	.	+	.	ID=gene-C9F04_RS11845;Name=C9F04_RS11845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11845;old_locus_tag=C9F04_12255;pseudo=true
NZ_PYKF01000399.1	Protein Homology	CDS	8793	9095	.	+	0	ID=cds-C9F04_RS11845;Parent=gene-C9F04_RS11845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9F04_RS11845;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000399.1	RefSeq	gene	9111	10355	.	+	.	ID=gene-C9F04_RS11850;Name=iolA;end_range=10355,.;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=C9F04_RS11850;old_locus_tag=C9F04_12260;partial=true
NZ_PYKF01000399.1	Protein Homology	CDS	9111	10355	.	+	0	ID=cds-WP_146712667.1;Parent=gene-C9F04_RS11850;Dbxref=Genbank:WP_146712667.1;Name=WP_146712667.1;end_range=10355,.;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9F04_RS11850;partial=true;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_146712667.1;transl_table=11
##sequence-region NZ_PYKF01000653.1 1 10339
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000653.1	RefSeq	region	1	10339	.	+	.	ID=NZ_PYKF01000653.1:1..10339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000653.1	RefSeq	gene	102	383	.	+	.	ID=gene-C9F04_RS20000;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9F04_RS20000;old_locus_tag=C9F04_20655
NZ_PYKF01000653.1	Protein Homology	CDS	102	383	.	+	0	ID=cds-WP_146713069.1;Parent=gene-C9F04_RS20000;Dbxref=Genbank:WP_146713069.1;Name=WP_146713069.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=C9F04_RS20000;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_146713069.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	418	1239	.	-	.	ID=gene-C9F04_RS20005;Name=C9F04_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20005;old_locus_tag=C9F04_20660
NZ_PYKF01000653.1	Protein Homology	CDS	418	1239	.	-	0	ID=cds-WP_000549649.1;Parent=gene-C9F04_RS20005;Dbxref=Genbank:WP_000549649.1;Name=WP_000549649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9F04_RS20005;product=serine protease;protein_id=WP_000549649.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	1508	1756	.	-	.	ID=gene-C9F04_RS20010;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9F04_RS20010;old_locus_tag=C9F04_20665
NZ_PYKF01000653.1	Protein Homology	CDS	1508	1756	.	-	0	ID=cds-WP_146713070.1;Parent=gene-C9F04_RS20010;Dbxref=Genbank:WP_146713070.1;Name=WP_146713070.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=C9F04_RS20010;product=acid resistance repetitive basic protein Asr;protein_id=WP_146713070.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	1992	2084	.	+	.	ID=gene-C9F04_RS26810;Name=C9F04_RS26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26810
NZ_PYKF01000653.1	Protein Homology	CDS	1992	2084	.	+	0	ID=cds-WP_001068154.1;Parent=gene-C9F04_RS26810;Dbxref=Genbank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9F04_RS26810;product=hypothetical protein;protein_id=WP_001068154.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	2151	3404	.	-	.	ID=gene-C9F04_RS20015;Name=C9F04_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20015;old_locus_tag=C9F04_20670
NZ_PYKF01000653.1	Protein Homology	CDS	2151	3404	.	-	0	ID=cds-WP_000091796.1;Parent=gene-C9F04_RS20015;Dbxref=Genbank:WP_000091796.1;Name=WP_000091796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9F04_RS20015;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	3524	4423	.	+	.	ID=gene-C9F04_RS20020;Name=C9F04_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20020;old_locus_tag=C9F04_20675
NZ_PYKF01000653.1	Protein Homology	CDS	3524	4423	.	+	0	ID=cds-WP_001019577.1;Parent=gene-C9F04_RS20020;Dbxref=Genbank:WP_001019577.1;Name=WP_001019577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9F04_RS20020;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	4551	5771	.	+	.	ID=gene-C9F04_RS20025;Name=C9F04_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20025;old_locus_tag=C9F04_20685
NZ_PYKF01000653.1	Protein Homology	CDS	4551	5771	.	+	0	ID=cds-WP_000225087.1;Parent=gene-C9F04_RS20025;Dbxref=Genbank:WP_000225087.1;Name=WP_000225087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9F04_RS20025;product=ROK family transcriptional regulator;protein_id=WP_000225087.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	5897	6592	.	+	.	ID=gene-C9F04_RS20030;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9F04_RS20030;old_locus_tag=C9F04_20690
NZ_PYKF01000653.1	Protein Homology	CDS	5897	6592	.	+	0	ID=cds-WP_000919233.1;Parent=gene-C9F04_RS20030;Dbxref=Genbank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9F04_RS20030;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	6548	7837	.	-	.	ID=gene-C9F04_RS20035;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9F04_RS20035;old_locus_tag=C9F04_20695
NZ_PYKF01000653.1	Protein Homology	CDS	6548	7837	.	-	0	ID=cds-WP_023228317.1;Parent=gene-C9F04_RS20035;Dbxref=Genbank:WP_023228317.1;Name=WP_023228317.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9F04_RS20035;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_023228317.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	7973	9121	.	-	.	ID=gene-C9F04_RS20040;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9F04_RS20040;old_locus_tag=C9F04_20700
NZ_PYKF01000653.1	Protein Homology	CDS	7973	9121	.	-	0	ID=cds-WP_000593088.1;Parent=gene-C9F04_RS20040;Dbxref=Genbank:WP_000593088.1;Name=WP_000593088.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9F04_RS20040;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593088.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	gene	9121	9768	.	-	.	ID=gene-C9F04_RS20045;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9F04_RS20045;old_locus_tag=C9F04_20705
NZ_PYKF01000653.1	Protein Homology	CDS	9121	9768	.	-	0	ID=cds-WP_000379677.1;Parent=gene-C9F04_RS20045;Dbxref=Genbank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9F04_RS20045;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11
NZ_PYKF01000653.1	RefSeq	pseudogene	9778	10339	.	-	.	ID=gene-C9F04_RS20050;Name=osmX;end_range=10339,.;gbkey=Gene;gene=osmX;gene_biotype=pseudogene;locus_tag=C9F04_RS20050;old_locus_tag=C9F04_20710;partial=true;pseudo=true
NZ_PYKF01000653.1	Protein Homology	CDS	9778	10339	.	-	1	ID=cds-C9F04_RS20050;Parent=gene-C9F04_RS20050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10339,.;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9F04_RS20050;partial=true;product=osmoprotectant ABC transporter substrate-binding protein OsmX;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000698.1 1 10298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000698.1	RefSeq	region	1	10298	.	+	.	ID=NZ_PYKF01000698.1:1..10298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000698.1	RefSeq	pseudogene	74	601	.	-	.	ID=gene-C9F04_RS21680;Name=C9F04_RS21680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21680;old_locus_tag=C9F04_22405;partial=true;pseudo=true;start_range=.,74
NZ_PYKF01000698.1	Protein Homology	CDS	74	601	.	-	0	ID=cds-C9F04_RS21680;Parent=gene-C9F04_RS21680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9F04_RS21680;partial=true;product=XylR family transcriptional regulator;pseudo=true;start_range=.,74;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	964	2286	.	+	.	ID=gene-C9F04_RS21685;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9F04_RS21685;old_locus_tag=C9F04_22415
NZ_PYKF01000698.1	Protein Homology	CDS	964	2286	.	+	0	ID=cds-WP_146713157.1;Parent=gene-C9F04_RS21685;Dbxref=Genbank:WP_146713157.1;Name=WP_146713157.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9F04_RS21685;product=xylose isomerase;protein_id=WP_146713157.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	2386	3840	.	+	.	ID=gene-C9F04_RS21690;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9F04_RS21690;old_locus_tag=C9F04_22420
NZ_PYKF01000698.1	Protein Homology	CDS	2386	3840	.	+	0	ID=cds-WP_135369443.1;Parent=gene-C9F04_RS21690;Dbxref=Genbank:WP_135369443.1;Name=WP_135369443.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9F04_RS21690;product=xylulokinase;protein_id=WP_135369443.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	4015	4368	.	+	.	ID=gene-C9F04_RS21695;Name=C9F04_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21695;old_locus_tag=C9F04_22425
NZ_PYKF01000698.1	Protein Homology	CDS	4015	4368	.	+	0	ID=cds-WP_001635944.1;Parent=gene-C9F04_RS21695;Dbxref=Genbank:WP_001635944.1;Name=WP_001635944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9F04_RS21695;product=YiaA/YiaB family protein;protein_id=WP_001635944.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	4389	5384	.	-	.	ID=gene-C9F04_RS21700;Name=C9F04_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21700;old_locus_tag=C9F04_22430
NZ_PYKF01000698.1	Protein Homology	CDS	4389	5384	.	-	0	ID=cds-WP_135369444.1;Parent=gene-C9F04_RS21700;Dbxref=Genbank:WP_135369444.1;Name=WP_135369444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9F04_RS21700;product=acyltransferase;protein_id=WP_135369444.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	5550	5852	.	+	.	ID=gene-C9F04_RS21710;Name=C9F04_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21710;old_locus_tag=C9F04_22440
NZ_PYKF01000698.1	Protein Homology	CDS	5550	5852	.	+	0	ID=cds-WP_000605590.1;Parent=gene-C9F04_RS21710;Dbxref=Genbank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9F04_RS21710;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	5991	6902	.	+	.	ID=gene-C9F04_RS21715;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9F04_RS21715;old_locus_tag=C9F04_22445
NZ_PYKF01000698.1	Protein Homology	CDS	5991	6902	.	+	0	ID=cds-WP_001168551.1;Parent=gene-C9F04_RS21715;Dbxref=Genbank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9F04_RS21715;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	6912	8981	.	+	.	ID=gene-C9F04_RS21720;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9F04_RS21720;old_locus_tag=C9F04_22450
NZ_PYKF01000698.1	Protein Homology	CDS	6912	8981	.	+	0	ID=cds-WP_146713158.1;Parent=gene-C9F04_RS21720;Dbxref=Genbank:WP_146713158.1;Name=WP_146713158.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F04_RS21720;product=glycine--tRNA ligase subunit beta;protein_id=WP_146713158.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	gene	9032	9571	.	-	.	ID=gene-C9F04_RS21725;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9F04_RS21725;old_locus_tag=C9F04_22455
NZ_PYKF01000698.1	Protein Homology	CDS	9032	9571	.	-	0	ID=cds-WP_135369445.1;Parent=gene-C9F04_RS21725;Dbxref=Genbank:WP_135369445.1;Name=WP_135369445.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9F04_RS21725;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_135369445.1;transl_table=11
NZ_PYKF01000698.1	RefSeq	pseudogene	9755	9966	.	-	.	ID=gene-C9F04_RS21730;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=pseudogene;locus_tag=C9F04_RS21730;old_locus_tag=C9F04_22460;pseudo=true
NZ_PYKF01000698.1	Protein Homology	CDS	9755	9966	.	-	0	ID=cds-C9F04_RS21730;Parent=gene-C9F04_RS21730;Note=frameshifted;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9F04_RS21730;product=RNA chaperone/antiterminator CspA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000357.1 1 10330
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000357.1	RefSeq	region	1	10330	.	+	.	ID=NZ_PYKF01000357.1:1..10330;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000357.1	RefSeq	pseudogene	1	104	.	+	.	ID=gene-C9F04_RS10490;Name=C9F04_RS10490;end_range=104,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10490;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000357.1	Protein Homology	CDS	1	104	.	+	2	ID=cds-C9F04_RS10490;Parent=gene-C9F04_RS10490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229225.1;locus_tag=C9F04_RS10490;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000357.1	RefSeq	pseudogene	125	334	.	+	.	ID=gene-C9F04_RS10495;Name=C9F04_RS10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10495;old_locus_tag=C9F04_10825;partial=true;pseudo=true;start_range=.,125
NZ_PYKF01000357.1	Protein Homology	CDS	125	334	.	+	0	ID=cds-C9F04_RS10495;Parent=gene-C9F04_RS10495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9F04_RS10495;partial=true;product=heme exporter protein CcmB;pseudo=true;start_range=.,125;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	386	1123	.	+	.	ID=gene-C9F04_RS10500;Name=C9F04_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10500;old_locus_tag=C9F04_10830
NZ_PYKF01000357.1	Protein Homology	CDS	386	1123	.	+	0	ID=cds-WP_000265995.1;Parent=gene-C9F04_RS10500;Dbxref=Genbank:WP_000265995.1;Name=WP_000265995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9F04_RS10500;product=heme ABC transporter permease;protein_id=WP_000265995.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	1120	1332	.	+	.	ID=gene-C9F04_RS10505;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9F04_RS10505;old_locus_tag=C9F04_10835
NZ_PYKF01000357.1	Protein Homology	CDS	1120	1332	.	+	0	ID=cds-WP_000074110.1;Parent=gene-C9F04_RS10505;Dbxref=Genbank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral component of membrane|0016021||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9F04_RS10505;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	1329	1808	.	+	.	ID=gene-C9F04_RS10510;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9F04_RS10510;old_locus_tag=C9F04_10840
NZ_PYKF01000357.1	Protein Homology	CDS	1329	1808	.	+	0	ID=cds-WP_001053600.1;Parent=gene-C9F04_RS10510;Dbxref=Genbank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9F04_RS10510;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	1805	3736	.	+	.	ID=gene-C9F04_RS10515;Name=C9F04_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10515;old_locus_tag=C9F04_10845
NZ_PYKF01000357.1	Protein Homology	CDS	1805	3736	.	+	0	ID=cds-WP_000982515.1;Parent=gene-C9F04_RS10515;Dbxref=Genbank:WP_000982515.1;Name=WP_000982515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9F04_RS10515;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982515.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	3733	4290	.	+	.	ID=gene-C9F04_RS10520;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9F04_RS10520;old_locus_tag=C9F04_10850
NZ_PYKF01000357.1	Protein Homology	CDS	3733	4290	.	+	0	ID=cds-WP_023165929.1;Parent=gene-C9F04_RS10520;Dbxref=Genbank:WP_023165929.1;Name=WP_023165929.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9F04_RS10520;product=thiol:disulfide interchange protein DsbE;protein_id=WP_023165929.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	pseudogene	4287	4868	.	+	.	ID=gene-C9F04_RS26590;Name=C9F04_RS26590;end_range=4868,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26590;partial=true;pseudo=true
NZ_PYKF01000357.1	Protein Homology	CDS	4287	4868	.	+	0	ID=cds-C9F04_RS26590;Parent=gene-C9F04_RS26590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9F04_RS26590;partial=true;product=cytochrome c-type biogenesis protein CcmH;pseudo=true;transl_table=11
NZ_PYKF01000357.1	RefSeq	pseudogene	4860	5291	.	+	.	ID=gene-C9F04_RS26595;Name=C9F04_RS26595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26595;partial=true;pseudo=true;start_range=.,4860
NZ_PYKF01000357.1	Protein Homology	CDS	4860	5291	.	+	0	ID=cds-C9F04_RS26595;Parent=gene-C9F04_RS26595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9F04_RS26595;partial=true;product=LysE family transporter;pseudo=true;start_range=.,4860;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	5385	6131	.	+	.	ID=gene-C9F04_RS10530;Name=C9F04_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10530;old_locus_tag=C9F04_10860
NZ_PYKF01000357.1	Protein Homology	CDS	5385	6131	.	+	0	ID=cds-WP_146712606.1;Parent=gene-C9F04_RS10530;Dbxref=Genbank:WP_146712606.1;Name=WP_146712606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9F04_RS10530;product=oxidative stress defense protein;protein_id=WP_146712606.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	6397	7290	.	-	.	ID=gene-C9F04_RS10535;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9F04_RS10535;old_locus_tag=C9F04_10870
NZ_PYKF01000357.1	Protein Homology	CDS	6397	7290	.	-	0	ID=cds-WP_000828345.1;Parent=gene-C9F04_RS10535;Dbxref=Genbank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9F04_RS10535;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	7444	8103	.	+	.	ID=gene-C9F04_RS10540;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9F04_RS10540;old_locus_tag=C9F04_10875
NZ_PYKF01000357.1	Protein Homology	CDS	7444	8103	.	+	0	ID=cds-WP_146712607.1;Parent=gene-C9F04_RS10540;Dbxref=Genbank:WP_146712607.1;Name=WP_146712607.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9F04_RS10540;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_146712607.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	8370	9602	.	+	.	ID=gene-C9F04_RS10545;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9F04_RS10545;old_locus_tag=C9F04_10880
NZ_PYKF01000357.1	Protein Homology	CDS	8370	9602	.	+	0	ID=cds-WP_001151627.1;Parent=gene-C9F04_RS10545;Dbxref=Genbank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9F04_RS10545;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11
NZ_PYKF01000357.1	RefSeq	gene	9983	10330	.	-	.	ID=gene-C9F04_RS10550;Name=C9F04_RS10550;end_range=10330,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10550;old_locus_tag=C9F04_10885;partial=true
NZ_PYKF01000357.1	Protein Homology	CDS	9983	10330	.	-	0	ID=cds-WP_146712608.1;Parent=gene-C9F04_RS10550;Dbxref=Genbank:WP_146712608.1;Name=WP_146712608.1;Ontology_term=GO:0006730,GO:0030272;end_range=10330,.;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9F04_RS10550;partial=true;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_146712608.1;transl_table=11
##sequence-region NZ_PYKF01000139.1 1 10301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000139.1	RefSeq	region	1	10301	.	+	.	ID=NZ_PYKF01000139.1:1..10301;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000139.1	RefSeq	gene	1	1521	.	+	.	ID=gene-C9F04_RS02865;Name=C9F04_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02865;old_locus_tag=C9F04_02970;partial=true;start_range=.,1
NZ_PYKF01000139.1	Protein Homology	CDS	1	1521	.	+	0	ID=cds-WP_146712266.1;Parent=gene-C9F04_RS02865;Dbxref=Genbank:WP_146712266.1;Name=WP_146712266.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9F04_RS02865;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_146712266.1;start_range=.,1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	1675	2502	.	+	.	ID=gene-C9F04_RS02870;Name=C9F04_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02870;old_locus_tag=C9F04_02975
NZ_PYKF01000139.1	Protein Homology	CDS	1675	2502	.	+	0	ID=cds-WP_146712267.1;Parent=gene-C9F04_RS02870;Dbxref=Genbank:WP_146712267.1;Name=WP_146712267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9F04_RS02870;product=DUF1311 domain-containing protein;protein_id=WP_146712267.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	2588	3382	.	+	.	ID=gene-C9F04_RS02875;Name=C9F04_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02875;old_locus_tag=C9F04_02980
NZ_PYKF01000139.1	Protein Homology	CDS	2588	3382	.	+	0	ID=cds-WP_146712268.1;Parent=gene-C9F04_RS02875;Dbxref=Genbank:WP_146712268.1;Name=WP_146712268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9F04_RS02875;product=TraB/GumN family protein;protein_id=WP_146712268.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	3584	4063	.	+	.	ID=gene-C9F04_RS02880;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9F04_RS02880;old_locus_tag=C9F04_02985
NZ_PYKF01000139.1	Protein Homology	CDS	3584	4063	.	+	0	ID=cds-WP_000186618.1;Parent=gene-C9F04_RS02880;Dbxref=Genbank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9F04_RS02880;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	4180	5832	.	-	.	ID=gene-C9F04_RS02885;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9F04_RS02885;old_locus_tag=C9F04_02990
NZ_PYKF01000139.1	Protein Homology	CDS	4180	5832	.	-	0	ID=cds-WP_000670398.1;Parent=gene-C9F04_RS02885;Dbxref=Genbank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F04_RS02885;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	6005	7225	.	+	.	ID=gene-C9F04_RS02890;Name=C9F04_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02890;old_locus_tag=C9F04_02995
NZ_PYKF01000139.1	Protein Homology	CDS	6005	7225	.	+	0	ID=cds-WP_001251593.1;Parent=gene-C9F04_RS02890;Dbxref=Genbank:WP_001251593.1;Name=WP_001251593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9F04_RS02890;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	7440	9116	.	+	.	ID=gene-C9F04_RS02895;Name=C9F04_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02895;old_locus_tag=C9F04_03000
NZ_PYKF01000139.1	Protein Homology	CDS	7440	9116	.	+	0	ID=cds-WP_000546202.1;Parent=gene-C9F04_RS02895;Dbxref=Genbank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9F04_RS02895;product=Kef family K(+) transporter;protein_id=WP_000546202.1;transl_table=11
NZ_PYKF01000139.1	RefSeq	gene	9165	10301	.	-	.	ID=gene-C9F04_RS02900;Name=C9F04_RS02900;end_range=10301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02900;old_locus_tag=C9F04_03005;partial=true
NZ_PYKF01000139.1	Protein Homology	CDS	9165	10301	.	-	0	ID=cds-WP_146712269.1;Parent=gene-C9F04_RS02900;Dbxref=Genbank:WP_146712269.1;Name=WP_146712269.1;end_range=10301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9F04_RS02900;partial=true;product=inosine/guanosine kinase;protein_id=WP_146712269.1;transl_table=11
##sequence-region NZ_PYKF01000254.1 1 10282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000254.1	RefSeq	region	1	10282	.	+	.	ID=NZ_PYKF01000254.1:1..10282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000254.1	RefSeq	gene	1	656	.	+	.	ID=gene-C9F04_RS06990;Name=C9F04_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06990;old_locus_tag=C9F04_07205;partial=true;start_range=.,1
NZ_PYKF01000254.1	Protein Homology	CDS	1	656	.	+	2	ID=cds-WP_261770753.1;Parent=gene-C9F04_RS06990;Dbxref=Genbank:WP_261770753.1;Name=WP_261770753.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9F04_RS06990;partial=true;product=FGGY-family carbohydrate kinase;protein_id=WP_261770753.1;start_range=.,1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	658	1080	.	+	.	ID=gene-C9F04_RS06995;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9F04_RS06995;old_locus_tag=C9F04_07210
NZ_PYKF01000254.1	Protein Homology	CDS	658	1080	.	+	0	ID=cds-WP_000920848.1;Parent=gene-C9F04_RS06995;Dbxref=Genbank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9F04_RS06995;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	1138	1848	.	+	.	ID=gene-C9F04_RS07000;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9F04_RS07000;old_locus_tag=C9F04_07215
NZ_PYKF01000254.1	Protein Homology	CDS	1138	1848	.	+	0	ID=cds-WP_000642330.1;Parent=gene-C9F04_RS07000;Dbxref=Genbank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9F04_RS07000;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	1907	3007	.	-	.	ID=gene-C9F04_RS07005;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9F04_RS07005;old_locus_tag=C9F04_07220
NZ_PYKF01000254.1	Protein Homology	CDS	1907	3007	.	-	0	ID=cds-WP_146712451.1;Parent=gene-C9F04_RS07005;Dbxref=Genbank:WP_146712451.1;Name=WP_146712451.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9F04_RS07005;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_146712451.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	3000	3395	.	-	.	ID=gene-C9F04_RS07010;Name=C9F04_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07010;old_locus_tag=C9F04_07225
NZ_PYKF01000254.1	Protein Homology	CDS	3000	3395	.	-	0	ID=cds-WP_000203913.1;Parent=gene-C9F04_RS07010;Dbxref=Genbank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9F04_RS07010;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	3414	4331	.	-	.	ID=gene-C9F04_RS07015;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9F04_RS07015;old_locus_tag=C9F04_07230
NZ_PYKF01000254.1	Protein Homology	CDS	3414	4331	.	-	0	ID=cds-WP_000044409.1;Parent=gene-C9F04_RS07015;Dbxref=Genbank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9F04_RS07015;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	4678	4905	.	-	.	ID=gene-C9F04_RS07020;Name=C9F04_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07020;old_locus_tag=C9F04_07235
NZ_PYKF01000254.1	Protein Homology	CDS	4678	4905	.	-	0	ID=cds-WP_000750393.1;Parent=gene-C9F04_RS07020;Dbxref=Genbank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9F04_RS07020;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	5098	6303	.	+	.	ID=gene-C9F04_RS07025;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9F04_RS07025;old_locus_tag=C9F04_07240
NZ_PYKF01000254.1	Protein Homology	CDS	5098	6303	.	+	0	ID=cds-WP_000991053.1;Parent=gene-C9F04_RS07025;Dbxref=Genbank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9F04_RS07025;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	6303	6746	.	+	.	ID=gene-C9F04_RS07030;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9F04_RS07030;old_locus_tag=C9F04_07245
NZ_PYKF01000254.1	Protein Homology	CDS	6303	6746	.	+	0	ID=cds-WP_146712452.1;Parent=gene-C9F04_RS07030;Dbxref=Genbank:WP_146712452.1;Name=WP_146712452.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=C9F04_RS07030;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_146712452.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	7046	7933	.	+	.	ID=gene-C9F04_RS07035;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F04_RS07035;old_locus_tag=C9F04_07250
NZ_PYKF01000254.1	Protein Homology	CDS	7046	7933	.	+	0	ID=cds-WP_135369239.1;Parent=gene-C9F04_RS07035;Dbxref=Genbank:WP_135369239.1;Name=WP_135369239.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9F04_RS07035;product=EamA family transporter RarD;protein_id=WP_135369239.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	7985	8791	.	-	.	ID=gene-C9F04_RS07040;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9F04_RS07040;old_locus_tag=C9F04_07255
NZ_PYKF01000254.1	Protein Homology	CDS	7985	8791	.	-	0	ID=cds-WP_000117748.1;Parent=gene-C9F04_RS07040;Dbxref=Genbank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9F04_RS07040;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	8901	9998	.	-	.	ID=gene-C9F04_RS07045;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9F04_RS07045;old_locus_tag=C9F04_07260
NZ_PYKF01000254.1	Protein Homology	CDS	8901	9998	.	-	0	ID=cds-WP_000678626.1;Parent=gene-C9F04_RS07045;Dbxref=Genbank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9F04_RS07045;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11
NZ_PYKF01000254.1	RefSeq	gene	10206	10282	.	+	.	ID=gene-C9F04_RS07050;Name=C9F04_RS07050;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS07050;old_locus_tag=C9F04_07265
NZ_PYKF01000254.1	tRNAscan-SE	tRNA	10206	10282	.	+	.	ID=rna-C9F04_RS07050;Parent=gene-C9F04_RS07050;anticodon=(pos:10240..10242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07050;product=tRNA-Met
NZ_PYKF01000254.1	tRNAscan-SE	exon	10206	10282	.	+	.	ID=exon-C9F04_RS07050-1;Parent=rna-C9F04_RS07050;anticodon=(pos:10240..10242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07050;product=tRNA-Met
##sequence-region NZ_PYKF01000344.1 1 10228
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000344.1	RefSeq	region	1	10228	.	+	.	ID=NZ_PYKF01000344.1:1..10228;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000344.1	RefSeq	gene	1	859	.	-	.	ID=gene-C9F04_RS10090;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9F04_RS10090;old_locus_tag=C9F04_10410;partial=true;start_range=.,1
NZ_PYKF01000344.1	Protein Homology	CDS	1	859	.	-	0	ID=cds-WP_146681135.1;Parent=gene-C9F04_RS10090;Dbxref=Genbank:WP_146681135.1;Name=WP_146681135.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9F04_RS10090;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_146681135.1;start_range=.,1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	1142	1603	.	-	.	ID=gene-C9F04_RS10095;Name=C9F04_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10095;old_locus_tag=C9F04_10415
NZ_PYKF01000344.1	Protein Homology	CDS	1142	1603	.	-	0	ID=cds-WP_001090314.1;Parent=gene-C9F04_RS10095;Dbxref=Genbank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9F04_RS10095;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	1661	2398	.	-	.	ID=gene-C9F04_RS10100;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9F04_RS10100;old_locus_tag=C9F04_10420
NZ_PYKF01000344.1	Protein Homology	CDS	1661	2398	.	-	0	ID=cds-WP_146712585.1;Parent=gene-C9F04_RS10100;Dbxref=Genbank:WP_146712585.1;Name=WP_146712585.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9F04_RS10100;product=DNA replication protein DnaC;protein_id=WP_146712585.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	2401	2940	.	-	.	ID=gene-C9F04_RS10105;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9F04_RS10105;old_locus_tag=C9F04_10425
NZ_PYKF01000344.1	Protein Homology	CDS	2401	2940	.	-	0	ID=cds-WP_000098578.1;Parent=gene-C9F04_RS10105;Dbxref=Genbank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9F04_RS10105;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	3033	3506	.	-	.	ID=gene-C9F04_RS10110;Name=C9F04_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10110;old_locus_tag=C9F04_10430
NZ_PYKF01000344.1	Protein Homology	CDS	3033	3506	.	-	0	ID=cds-WP_146712586.1;Parent=gene-C9F04_RS10110;Dbxref=Genbank:WP_146712586.1;Name=WP_146712586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9F04_RS10110;product=threonine/serine exporter;protein_id=WP_146712586.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	3497	4273	.	-	.	ID=gene-C9F04_RS10115;Name=C9F04_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10115;old_locus_tag=C9F04_10435
NZ_PYKF01000344.1	Protein Homology	CDS	3497	4273	.	-	0	ID=cds-WP_001727653.1;Parent=gene-C9F04_RS10115;Dbxref=Genbank:WP_001727653.1;Name=WP_001727653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9F04_RS10115;product=threonine/serine exporter ThrE family protein;protein_id=WP_001727653.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	4985	5710	.	+	.	ID=gene-C9F04_RS10120;Name=C9F04_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10120;old_locus_tag=C9F04_10440
NZ_PYKF01000344.1	Protein Homology	CDS	4985	5710	.	+	0	ID=cds-WP_000936652.1;Parent=gene-C9F04_RS10120;Dbxref=Genbank:WP_000936652.1;Name=WP_000936652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9F04_RS10120;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	5671	6345	.	+	.	ID=gene-C9F04_RS10125;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9F04_RS10125;old_locus_tag=C9F04_10445
NZ_PYKF01000344.1	Protein Homology	CDS	5671	6345	.	+	0	ID=cds-WP_000431546.1;Parent=gene-C9F04_RS10125;Dbxref=Genbank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9F04_RS10125;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	6396	6854	.	-	.	ID=gene-C9F04_RS10130;Name=C9F04_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10130;old_locus_tag=C9F04_10450
NZ_PYKF01000344.1	Protein Homology	CDS	6396	6854	.	-	0	ID=cds-WP_000058276.1;Parent=gene-C9F04_RS10130;Dbxref=Genbank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9F04_RS10130;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	7005	7793	.	-	.	ID=gene-C9F04_RS10135;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9F04_RS10135;old_locus_tag=C9F04_10455
NZ_PYKF01000344.1	Protein Homology	CDS	7005	7793	.	-	0	ID=cds-WP_000331520.1;Parent=gene-C9F04_RS10135;Dbxref=Genbank:WP_000331520.1;Name=WP_000331520.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9F04_RS10135;product=siderophore-iron reductase FhuF;protein_id=WP_000331520.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	7914	8978	.	-	.	ID=gene-C9F04_RS10140;Name=C9F04_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10140;old_locus_tag=C9F04_10460
NZ_PYKF01000344.1	Protein Homology	CDS	7914	8978	.	-	0	ID=cds-WP_000211208.1;Parent=gene-C9F04_RS10140;Dbxref=Genbank:WP_000211208.1;Name=WP_000211208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9F04_RS10140;product=GGDEF domain-containing protein;protein_id=WP_000211208.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	9230	9466	.	+	.	ID=gene-C9F04_RS10145;Name=C9F04_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10145;old_locus_tag=C9F04_10465
NZ_PYKF01000344.1	Protein Homology	CDS	9230	9466	.	+	0	ID=cds-WP_000941877.1;Parent=gene-C9F04_RS10145;Dbxref=Genbank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9F04_RS10145;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11
NZ_PYKF01000344.1	RefSeq	gene	9498	9584	.	-	.	ID=gene-C9F04_RS10150;Name=C9F04_RS10150;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10150;old_locus_tag=C9F04_10470
NZ_PYKF01000344.1	tRNAscan-SE	tRNA	9498	9584	.	-	.	ID=rna-C9F04_RS10150;Parent=gene-C9F04_RS10150;anticodon=(pos:complement(9548..9550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10150;product=tRNA-Leu
NZ_PYKF01000344.1	tRNAscan-SE	exon	9498	9584	.	-	.	ID=exon-C9F04_RS10150-1;Parent=rna-C9F04_RS10150;anticodon=(pos:complement(9548..9550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10150;product=tRNA-Leu
NZ_PYKF01000344.1	RefSeq	gene	9775	10228	.	-	.	ID=gene-C9F04_RS10155;Name=C9F04_RS10155;end_range=10228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10155;old_locus_tag=C9F04_10475;partial=true
NZ_PYKF01000344.1	Protein Homology	CDS	9775	10228	.	-	1	ID=cds-WP_146712587.1;Parent=gene-C9F04_RS10155;Dbxref=Genbank:WP_146712587.1;Name=WP_146712587.1;Ontology_term=GO:0008168;end_range=10228,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=C9F04_RS10155;partial=true;product=methyltransferase;protein_id=WP_146712587.1;transl_table=11
##sequence-region NZ_PYKF01000716.1 1 10184
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000716.1	RefSeq	region	1	10184	.	+	.	ID=NZ_PYKF01000716.1:1..10184;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000716.1	RefSeq	gene	1	464	.	+	.	ID=gene-C9F04_RS22170;Name=C9F04_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22170;old_locus_tag=C9F04_22905;partial=true;start_range=.,1
NZ_PYKF01000716.1	Protein Homology	CDS	1	464	.	+	2	ID=cds-WP_146713186.1;Parent=gene-C9F04_RS22170;Dbxref=Genbank:WP_146713186.1;Name=WP_146713186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507155.1;locus_tag=C9F04_RS22170;partial=true;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_146713186.1;start_range=.,1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	544	617	.	+	.	ID=gene-C9F04_RS22175;Name=C9F04_RS22175;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS22175;old_locus_tag=C9F04_22910
NZ_PYKF01000716.1	tRNAscan-SE	tRNA	544	617	.	+	.	ID=rna-C9F04_RS22175;Parent=gene-C9F04_RS22175;anticodon=(pos:576..578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS22175;product=tRNA-Gly
NZ_PYKF01000716.1	tRNAscan-SE	exon	544	617	.	+	.	ID=exon-C9F04_RS22175-1;Parent=rna-C9F04_RS22175;anticodon=(pos:576..578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS22175;product=tRNA-Gly
NZ_PYKF01000716.1	RefSeq	gene	710	922	.	-	.	ID=gene-C9F04_RS22180;Name=C9F04_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22180;old_locus_tag=C9F04_22915
NZ_PYKF01000716.1	Protein Homology	CDS	710	922	.	-	0	ID=cds-WP_063808845.1;Parent=gene-C9F04_RS22180;Dbxref=Genbank:WP_063808845.1;Name=WP_063808845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727959.1;locus_tag=C9F04_RS22180;product=hypothetical protein;protein_id=WP_063808845.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	1131	1358	.	+	.	ID=gene-C9F04_RS22185;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=C9F04_RS22185;old_locus_tag=C9F04_22920
NZ_PYKF01000716.1	Protein Homology	CDS	1131	1358	.	+	0	ID=cds-WP_000557545.1;Parent=gene-C9F04_RS22185;Dbxref=Genbank:WP_000557545.1;Name=WP_000557545.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461951.1;locus_tag=C9F04_RS22185;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557545.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	1358	1756	.	+	.	ID=gene-C9F04_RS22190;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=C9F04_RS22190;old_locus_tag=C9F04_22925
NZ_PYKF01000716.1	Protein Homology	CDS	1358	1756	.	+	0	ID=cds-WP_000911337.1;Parent=gene-C9F04_RS22190;Dbxref=Genbank:WP_000911337.1;Name=WP_000911337.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=C9F04_RS22190;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911337.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	2560	3096	.	+	.	ID=gene-C9F04_RS22200;Name=C9F04_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22200;old_locus_tag=C9F04_22935
NZ_PYKF01000716.1	Protein Homology	CDS	2560	3096	.	+	0	ID=cds-WP_001038500.1;Parent=gene-C9F04_RS22200;Dbxref=Genbank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9F04_RS22200;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	3143	3775	.	+	.	ID=gene-C9F04_RS22205;Name=C9F04_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22205;old_locus_tag=C9F04_22940
NZ_PYKF01000716.1	Protein Homology	CDS	3143	3775	.	+	0	ID=cds-WP_000835259.1;Parent=gene-C9F04_RS22205;Dbxref=Genbank:WP_000835259.1;Name=WP_000835259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9F04_RS22205;product=YfdX family protein;protein_id=WP_000835259.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	4494	5081	.	+	.	ID=gene-C9F04_RS22210;Name=C9F04_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22210;old_locus_tag=C9F04_22945
NZ_PYKF01000716.1	Protein Homology	CDS	4494	5081	.	+	0	ID=cds-WP_001244645.1;Parent=gene-C9F04_RS22210;Dbxref=Genbank:WP_001244645.1;Name=WP_001244645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=C9F04_RS22210;product=fimbrial protein;protein_id=WP_001244645.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	5201	7690	.	+	.	ID=gene-C9F04_RS22215;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9F04_RS22215;old_locus_tag=C9F04_22950
NZ_PYKF01000716.1	Protein Homology	CDS	5201	7690	.	+	0	ID=cds-WP_146713187.1;Parent=gene-C9F04_RS22215;Dbxref=Genbank:WP_146713187.1;Name=WP_146713187.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9F04_RS22215;product=fimbrial outer membrane usher protein StdB;protein_id=WP_146713187.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	7731	8474	.	+	.	ID=gene-C9F04_RS22220;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9F04_RS22220;old_locus_tag=C9F04_22955
NZ_PYKF01000716.1	Protein Homology	CDS	7731	8474	.	+	0	ID=cds-WP_000798502.1;Parent=gene-C9F04_RS22220;Dbxref=Genbank:WP_000798502.1;Name=WP_000798502.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9F04_RS22220;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798502.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	8471	9547	.	+	.	ID=gene-C9F04_RS22225;Name=C9F04_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22225;old_locus_tag=C9F04_22960
NZ_PYKF01000716.1	Protein Homology	CDS	8471	9547	.	+	0	ID=cds-WP_135369141.1;Parent=gene-C9F04_RS22225;Dbxref=Genbank:WP_135369141.1;Name=WP_135369141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9F04_RS22225;product=hypothetical protein;protein_id=WP_135369141.1;transl_table=11
NZ_PYKF01000716.1	RefSeq	gene	9691	10184	.	+	.	ID=gene-C9F04_RS22230;Name=C9F04_RS22230;end_range=10184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22230;old_locus_tag=C9F04_22965;partial=true
NZ_PYKF01000716.1	Protein Homology	CDS	9691	10184	.	+	0	ID=cds-WP_261771462.1;Parent=gene-C9F04_RS22230;Dbxref=Genbank:WP_261771462.1;Name=WP_261771462.1;Ontology_term=GO:0006351;end_range=10184,.;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000336954.1;locus_tag=C9F04_RS22230;partial=true;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_261771462.1;transl_table=11
##sequence-region NZ_PYKF01000667.1 1 10170
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000667.1	RefSeq	region	1	10170	.	+	.	ID=NZ_PYKF01000667.1:1..10170;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000667.1	RefSeq	gene	1	1246	.	+	.	ID=gene-C9F04_RS20410;Name=C9F04_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20410;old_locus_tag=C9F04_21075;partial=true;start_range=.,1
NZ_PYKF01000667.1	Protein Homology	CDS	1	1246	.	+	1	ID=cds-WP_261771414.1;Parent=gene-C9F04_RS20410;Dbxref=Genbank:WP_261771414.1;Name=WP_261771414.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9F04_RS20410;partial=true;product=M3 family metallopeptidase;protein_id=WP_261771414.1;start_range=.,1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	1253	2011	.	+	.	ID=gene-C9F04_RS20415;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9F04_RS20415;old_locus_tag=C9F04_21080
NZ_PYKF01000667.1	Protein Homology	CDS	1253	2011	.	+	0	ID=cds-WP_146713090.1;Parent=gene-C9F04_RS20415;Dbxref=Genbank:WP_146713090.1;Name=WP_146713090.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9F04_RS20415;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_146713090.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	2103	3575	.	-	.	ID=gene-C9F04_RS20420;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9F04_RS20420;old_locus_tag=C9F04_21085
NZ_PYKF01000667.1	Protein Homology	CDS	2103	3575	.	-	0	ID=cds-WP_001098270.1;Parent=gene-C9F04_RS20420;Dbxref=Genbank:WP_001098270.1;Name=WP_001098270.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9F04_RS20420;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098270.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	3906	4334	.	-	.	ID=gene-C9F04_RS20425;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9F04_RS20425;old_locus_tag=C9F04_21090
NZ_PYKF01000667.1	Protein Homology	CDS	3906	4334	.	-	0	ID=cds-WP_135369633.1;Parent=gene-C9F04_RS20425;Dbxref=Genbank:WP_135369633.1;Name=WP_135369633.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472469.1;locus_tag=C9F04_RS20425;product=universal stress protein UspA;protein_id=WP_135369633.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	4722	5057	.	+	.	ID=gene-C9F04_RS20430;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9F04_RS20430;old_locus_tag=C9F04_21095
NZ_PYKF01000667.1	Protein Homology	CDS	4722	5057	.	+	0	ID=cds-WP_000626193.1;Parent=gene-C9F04_RS20430;Dbxref=Genbank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9F04_RS20430;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	5198	6694	.	-	.	ID=gene-C9F04_RS20435;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9F04_RS20435;old_locus_tag=C9F04_21100
NZ_PYKF01000667.1	Protein Homology	CDS	5198	6694	.	-	0	ID=cds-WP_000902764.1;Parent=gene-C9F04_RS20435;Dbxref=Genbank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9F04_RS20435;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	pseudogene	6925	8121	.	+	.	ID=gene-C9F04_RS20440;Name=C9F04_RS20440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20440;old_locus_tag=C9F04_21105;pseudo=true
NZ_PYKF01000667.1	Protein Homology	CDS	6925	8121	.	+	0	ID=cds-C9F04_RS20440;Parent=gene-C9F04_RS20440;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9F04_RS20440;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	8427	9494	.	+	.	ID=gene-C9F04_RS20445;Name=C9F04_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20445;old_locus_tag=C9F04_21110
NZ_PYKF01000667.1	Protein Homology	CDS	8427	9494	.	+	0	ID=cds-WP_000359836.1;Parent=gene-C9F04_RS20445;Dbxref=Genbank:WP_000359836.1;Name=WP_000359836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9F04_RS20445;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_000359836.1;transl_table=11
NZ_PYKF01000667.1	RefSeq	gene	9491	10170	.	+	.	ID=gene-C9F04_RS20450;Name=C9F04_RS20450;end_range=10170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20450;old_locus_tag=C9F04_21115;partial=true
NZ_PYKF01000667.1	Protein Homology	CDS	9491	10170	.	+	0	ID=cds-WP_146713091.1;Parent=gene-C9F04_RS20450;Dbxref=Genbank:WP_146713091.1;Name=WP_146713091.1;Ontology_term=GO:0005524;end_range=10170,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312386.2;locus_tag=C9F04_RS20450;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146713091.1;transl_table=11
##sequence-region NZ_PYKF01000188.1 1 23649
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000188.1	RefSeq	region	1	23649	.	+	.	ID=NZ_PYKF01000188.1:1..23649;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000188.1	RefSeq	pseudogene	1	140	.	-	.	ID=gene-C9F04_RS04290;Name=C9F04_RS04290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04290;old_locus_tag=C9F04_04430;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000188.1	Protein Homology	CDS	1	140	.	-	0	ID=cds-C9F04_RS04290;Parent=gene-C9F04_RS04290;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508904.1;locus_tag=C9F04_RS04290;partial=true;product=5'/3'-nucleotidase SurE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	210	482	.	-	.	ID=gene-C9F04_RS04295;Name=C9F04_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04295;old_locus_tag=C9F04_04435
NZ_PYKF01000188.1	Protein Homology	CDS	210	482	.	-	0	ID=cds-WP_023218031.1;Parent=gene-C9F04_RS04295;Dbxref=Genbank:WP_023218031.1;Name=WP_023218031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101670.1;locus_tag=C9F04_RS04295;product=HPr family phosphocarrier protein;protein_id=WP_023218031.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	524	1363	.	-	.	ID=gene-C9F04_RS04300;Name=C9F04_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04300;old_locus_tag=C9F04_04440
NZ_PYKF01000188.1	Protein Homology	CDS	524	1363	.	-	0	ID=cds-WP_023218030.1;Parent=gene-C9F04_RS04300;Dbxref=Genbank:WP_023218030.1;Name=WP_023218030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F04_RS04300;product=class II aldolase;protein_id=WP_023218030.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	1369	2112	.	-	.	ID=gene-C9F04_RS04305;Name=C9F04_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04305;old_locus_tag=C9F04_04445
NZ_PYKF01000188.1	Protein Homology	CDS	1369	2112	.	-	0	ID=cds-WP_023218029.1;Parent=gene-C9F04_RS04305;Dbxref=Genbank:WP_023218029.1;Name=WP_023218029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600627.1;locus_tag=C9F04_RS04305;product=GntR family transcriptional regulator;protein_id=WP_023218029.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	2299	3333	.	-	.	ID=gene-C9F04_RS04310;Name=C9F04_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04310;old_locus_tag=C9F04_04450
NZ_PYKF01000188.1	Protein Homology	CDS	2299	3333	.	-	0	ID=cds-WP_146712327.1;Parent=gene-C9F04_RS04310;Dbxref=Genbank:WP_146712327.1;Name=WP_146712327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.2;locus_tag=C9F04_RS04310;product=zinc-dependent dehydrogenase;protein_id=WP_146712327.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	3333	4844	.	-	.	ID=gene-C9F04_RS04315;Name=C9F04_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04315;old_locus_tag=C9F04_04455
NZ_PYKF01000188.1	Protein Homology	CDS	3333	4844	.	-	0	ID=cds-WP_023231843.1;Parent=gene-C9F04_RS04315;Dbxref=Genbank:WP_023231843.1;Name=WP_023231843.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012589.2;locus_tag=C9F04_RS04315;product=FGGY family carbohydrate kinase;protein_id=WP_023231843.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	4922	6313	.	-	.	ID=gene-C9F04_RS04320;Name=C9F04_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04320;old_locus_tag=C9F04_04460
NZ_PYKF01000188.1	Protein Homology	CDS	4922	6313	.	-	0	ID=cds-WP_023218026.1;Parent=gene-C9F04_RS04320;Dbxref=Genbank:WP_023218026.1;Name=WP_023218026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016181922.1;locus_tag=C9F04_RS04320;product=PTS galactitol transporter subunit IIC;protein_id=WP_023218026.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	6325	6606	.	-	.	ID=gene-C9F04_RS04325;Name=C9F04_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04325;old_locus_tag=C9F04_04465
NZ_PYKF01000188.1	Protein Homology	CDS	6325	6606	.	-	0	ID=cds-WP_135369532.1;Parent=gene-C9F04_RS04325;Dbxref=Genbank:WP_135369532.1;Name=WP_135369532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312378.1;locus_tag=C9F04_RS04325;product=PTS sugar transporter subunit IIB;protein_id=WP_135369532.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	6666	7130	.	-	.	ID=gene-C9F04_RS04330;Name=C9F04_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04330;old_locus_tag=C9F04_04470
NZ_PYKF01000188.1	Protein Homology	CDS	6666	7130	.	-	0	ID=cds-WP_072275481.1;Parent=gene-C9F04_RS04330;Dbxref=Genbank:WP_072275481.1;Name=WP_072275481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012579.2;locus_tag=C9F04_RS04330;product=PTS sugar transporter subunit IIA;protein_id=WP_072275481.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	7762	8010	.	+	.	ID=gene-C9F04_RS04335;Name=C9F04_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04335;old_locus_tag=C9F04_04475
NZ_PYKF01000188.1	Protein Homology	CDS	7762	8010	.	+	0	ID=cds-WP_000885424.1;Parent=gene-C9F04_RS04335;Dbxref=Genbank:WP_000885424.1;Name=WP_000885424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9F04_RS04335;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	8000	8284	.	+	.	ID=gene-C9F04_RS04340;Name=C9F04_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04340;old_locus_tag=C9F04_04480
NZ_PYKF01000188.1	Protein Homology	CDS	8000	8284	.	+	0	ID=cds-WP_000221343.1;Parent=gene-C9F04_RS04340;Dbxref=Genbank:WP_000221343.1;Name=WP_000221343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9F04_RS04340;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000221343.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	8455	8844	.	+	.	ID=gene-C9F04_RS04345;Name=C9F04_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04345;old_locus_tag=C9F04_04485
NZ_PYKF01000188.1	Protein Homology	CDS	8455	8844	.	+	0	ID=cds-WP_001652798.1;Parent=gene-C9F04_RS04345;Dbxref=Genbank:WP_001652798.1;Name=WP_001652798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9F04_RS04345;product=RidA family protein;protein_id=WP_001652798.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	8892	9971	.	-	.	ID=gene-C9F04_RS04350;Name=C9F04_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04350;old_locus_tag=C9F04_04490
NZ_PYKF01000188.1	Protein Homology	CDS	8892	9971	.	-	0	ID=cds-WP_079973832.1;Parent=gene-C9F04_RS04350;Dbxref=Genbank:WP_079973832.1;Name=WP_079973832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9F04_RS04350;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_079973832.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	10164	10652	.	-	.	ID=gene-C9F04_RS04355;Name=C9F04_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04355;old_locus_tag=C9F04_04495
NZ_PYKF01000188.1	Protein Homology	CDS	10164	10652	.	-	0	ID=cds-WP_001293637.1;Parent=gene-C9F04_RS04355;Dbxref=Genbank:WP_001293637.1;Name=WP_001293637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9F04_RS04355;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293637.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	10697	12205	.	+	.	ID=gene-C9F04_RS04360;Name=C9F04_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04360;old_locus_tag=C9F04_04500
NZ_PYKF01000188.1	Protein Homology	CDS	10697	12205	.	+	0	ID=cds-WP_146712328.1;Parent=gene-C9F04_RS04360;Dbxref=Genbank:WP_146712328.1;Name=WP_146712328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F04_RS04360;product=FAD-dependent oxidoreductase;protein_id=WP_146712328.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	12195	13436	.	+	.	ID=gene-C9F04_RS04365;Name=C9F04_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04365;old_locus_tag=C9F04_04505
NZ_PYKF01000188.1	Protein Homology	CDS	12195	13436	.	+	0	ID=cds-WP_135369106.1;Parent=gene-C9F04_RS04365;Dbxref=Genbank:WP_135369106.1;Name=WP_135369106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9F04_RS04365;product=MFS transporter;protein_id=WP_135369106.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	13506	15062	.	+	.	ID=gene-C9F04_RS04370;Name=C9F04_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04370;old_locus_tag=C9F04_04510
NZ_PYKF01000188.1	Protein Homology	CDS	13506	15062	.	+	0	ID=cds-WP_135369107.1;Parent=gene-C9F04_RS04370;Dbxref=Genbank:WP_135369107.1;Name=WP_135369107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9F04_RS04370;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_135369107.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	15239	16525	.	+	.	ID=gene-C9F04_RS04375;Name=C9F04_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04375;old_locus_tag=C9F04_04515
NZ_PYKF01000188.1	Protein Homology	CDS	15239	16525	.	+	0	ID=cds-WP_146712329.1;Parent=gene-C9F04_RS04375;Dbxref=Genbank:WP_146712329.1;Name=WP_146712329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9F04_RS04375;product=MFS transporter;protein_id=WP_146712329.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	16500	17525	.	+	.	ID=gene-C9F04_RS04380;Name=C9F04_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04380;old_locus_tag=C9F04_04520
NZ_PYKF01000188.1	Protein Homology	CDS	16500	17525	.	+	0	ID=cds-WP_000864928.1;Parent=gene-C9F04_RS04380;Dbxref=Genbank:WP_000864928.1;Name=WP_000864928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9F04_RS04380;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864928.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	17584	18375	.	-	.	ID=gene-C9F04_RS04385;Name=C9F04_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04385;old_locus_tag=C9F04_04525
NZ_PYKF01000188.1	Protein Homology	CDS	17584	18375	.	-	0	ID=cds-WP_001518759.1;Parent=gene-C9F04_RS04385;Dbxref=Genbank:WP_001518759.1;Name=WP_001518759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9F04_RS04385;product=FadR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	18421	19512	.	-	.	ID=gene-C9F04_RS04390;Name=C9F04_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04390;old_locus_tag=C9F04_04530
NZ_PYKF01000188.1	Protein Homology	CDS	18421	19512	.	-	0	ID=cds-WP_000981375.1;Parent=gene-C9F04_RS04390;Dbxref=Genbank:WP_000981375.1;Name=WP_000981375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9F04_RS04390;product=linear amide C-N hydrolase;protein_id=WP_000981375.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	19941	21044	.	+	.	ID=gene-C9F04_RS04395;Name=C9F04_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04395;old_locus_tag=C9F04_04535
NZ_PYKF01000188.1	Protein Homology	CDS	19941	21044	.	+	0	ID=cds-WP_146712330.1;Parent=gene-C9F04_RS04395;Dbxref=Genbank:WP_146712330.1;Name=WP_146712330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9F04_RS04395;product=hydrogenase small subunit;protein_id=WP_146712330.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	21047	22849	.	+	.	ID=gene-C9F04_RS04400;Name=C9F04_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04400;old_locus_tag=C9F04_04540
NZ_PYKF01000188.1	Protein Homology	CDS	21047	22849	.	+	0	ID=cds-WP_146712331.1;Parent=gene-C9F04_RS04400;Dbxref=Genbank:WP_146712331.1;Name=WP_146712331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F04_RS04400;product=nickel-dependent hydrogenase large subunit;protein_id=WP_146712331.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	gene	22800	23543	.	+	.	ID=gene-C9F04_RS04405;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9F04_RS04405;old_locus_tag=C9F04_04545
NZ_PYKF01000188.1	Protein Homology	CDS	22800	23543	.	+	0	ID=cds-WP_000924456.1;Parent=gene-C9F04_RS04405;Dbxref=Genbank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016021;gbkey=CDS;gene=cybH;go_component=integral component of membrane|0016021||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9F04_RS04405;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11
NZ_PYKF01000188.1	RefSeq	pseudogene	23549	23649	.	+	.	ID=gene-C9F04_RS26900;Name=C9F04_RS26900;end_range=23649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26900;partial=true;pseudo=true
NZ_PYKF01000188.1	Protein Homology	CDS	23549	23649	.	+	0	ID=cds-C9F04_RS26900;Parent=gene-C9F04_RS26900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=23649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003671.1;locus_tag=C9F04_RS26900;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000709.1 1 10106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000709.1	RefSeq	region	1	10106	.	+	.	ID=NZ_PYKF01000709.1:1..10106;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000709.1	RefSeq	pseudogene	1	739	.	-	.	ID=gene-C9F04_RS22000;Name=C9F04_RS22000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22000;old_locus_tag=C9F04_22735;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000709.1	Protein Homology	CDS	1	739	.	-	0	ID=cds-C9F04_RS22000;Parent=gene-C9F04_RS22000;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F04_RS22000;partial=true;product=SEL1-like repeat protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000709.1	RefSeq	pseudogene	914	1045	.	+	.	ID=gene-C9F04_RS27240;Name=C9F04_RS27240;end_range=1045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27240;partial=true;pseudo=true
NZ_PYKF01000709.1	Protein Homology	CDS	914	1045	.	+	0	ID=cds-C9F04_RS27240;Parent=gene-C9F04_RS27240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=C9F04_RS27240;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	1276	2640	.	+	.	ID=gene-C9F04_RS22005;Name=C9F04_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22005;old_locus_tag=C9F04_22740
NZ_PYKF01000709.1	Protein Homology	CDS	1276	2640	.	+	0	ID=cds-WP_001000938.1;Parent=gene-C9F04_RS22005;Dbxref=Genbank:WP_001000938.1;Name=WP_001000938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9F04_RS22005;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	2687	3178	.	-	.	ID=gene-C9F04_RS22010;Name=C9F04_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22010;old_locus_tag=C9F04_22745
NZ_PYKF01000709.1	Protein Homology	CDS	2687	3178	.	-	0	ID=cds-WP_186799074.1;Parent=gene-C9F04_RS22010;Dbxref=Genbank:WP_186799074.1;Name=WP_186799074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F04_RS22010;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_186799074.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	3304	4215	.	+	.	ID=gene-C9F04_RS22015;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9F04_RS22015;old_locus_tag=C9F04_22750
NZ_PYKF01000709.1	Protein Homology	CDS	3304	4215	.	+	0	ID=cds-WP_000705816.1;Parent=gene-C9F04_RS22015;Dbxref=Genbank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9F04_RS22015;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	4178	4768	.	+	.	ID=gene-C9F04_RS22020;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9F04_RS22020;old_locus_tag=C9F04_22755
NZ_PYKF01000709.1	Protein Homology	CDS	4178	4768	.	+	0	ID=cds-WP_001275809.1;Parent=gene-C9F04_RS22020;Dbxref=Genbank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9F04_RS22020;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	4865	5674	.	-	.	ID=gene-C9F04_RS22025;Name=C9F04_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22025;old_locus_tag=C9F04_22760
NZ_PYKF01000709.1	Protein Homology	CDS	4865	5674	.	-	0	ID=cds-WP_146713178.1;Parent=gene-C9F04_RS22025;Dbxref=Genbank:WP_146713178.1;Name=WP_146713178.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9F04_RS22025;product=phosphonoacetaldehyde hydrolase;protein_id=WP_146713178.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	5684	6787	.	-	.	ID=gene-C9F04_RS22030;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9F04_RS22030;old_locus_tag=C9F04_22765
NZ_PYKF01000709.1	Protein Homology	CDS	5684	6787	.	-	0	ID=cds-WP_023182335.1;Parent=gene-C9F04_RS22030;Dbxref=Genbank:WP_023182335.1;Name=WP_023182335.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9F04_RS22030;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_023182335.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	6927	7646	.	+	.	ID=gene-C9F04_RS22035;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9F04_RS22035;old_locus_tag=C9F04_22770
NZ_PYKF01000709.1	Protein Homology	CDS	6927	7646	.	+	0	ID=cds-WP_000836268.1;Parent=gene-C9F04_RS22035;Dbxref=Genbank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9F04_RS22035;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	7844	8857	.	+	.	ID=gene-C9F04_RS22040;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9F04_RS22040;old_locus_tag=C9F04_22775
NZ_PYKF01000709.1	Protein Homology	CDS	7844	8857	.	+	0	ID=cds-WP_146713177.1;Parent=gene-C9F04_RS22040;Dbxref=Genbank:WP_146713177.1;Name=WP_146713177.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=phnS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9F04_RS22040;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_146713177.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	gene	8863	9972	.	+	.	ID=gene-C9F04_RS22045;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9F04_RS22045;old_locus_tag=C9F04_22780
NZ_PYKF01000709.1	Protein Homology	CDS	8863	9972	.	+	0	ID=cds-WP_001527281.1;Parent=gene-C9F04_RS22045;Dbxref=Genbank:WP_001527281.1;Name=WP_001527281.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9F04_RS22045;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_001527281.1;transl_table=11
NZ_PYKF01000709.1	RefSeq	pseudogene	9975	10106	.	+	.	ID=gene-C9F04_RS22050;Name=C9F04_RS22050;end_range=10106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22050;old_locus_tag=C9F04_22785;partial=true;pseudo=true
NZ_PYKF01000709.1	Protein Homology	CDS	9975	10106	.	+	0	ID=cds-C9F04_RS22050;Parent=gene-C9F04_RS22050;Note=involved in the transport of 2-aminoethylphosphonate into the cell%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F04_RS22050;partial=true;product=2-aminoethylphosphonate ABC transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000351.1 1 9988
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000351.1	RefSeq	region	1	9988	.	+	.	ID=NZ_PYKF01000351.1:1..9988;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000351.1	RefSeq	pseudogene	1	346	.	+	.	ID=gene-C9F04_RS10330;Name=C9F04_RS10330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10330;old_locus_tag=C9F04_10660;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000351.1	Protein Homology	CDS	1	346	.	+	1	ID=cds-C9F04_RS10330;Parent=gene-C9F04_RS10330;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892400.1;locus_tag=C9F04_RS10330;partial=true;product=L-cystine ABC transporter ATP-binding protein YecC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	579	1301	.	+	.	ID=gene-C9F04_RS10335;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9F04_RS10335;old_locus_tag=C9F04_10665
NZ_PYKF01000351.1	Protein Homology	CDS	579	1301	.	+	0	ID=cds-WP_001157172.1;Parent=gene-C9F04_RS10335;Dbxref=Genbank:WP_001157172.1;Name=WP_001157172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9F04_RS10335;product=transcriptional regulator SdiA;protein_id=WP_001157172.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	1368	1592	.	-	.	ID=gene-C9F04_RS10340;Name=C9F04_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10340;old_locus_tag=C9F04_10670
NZ_PYKF01000351.1	Protein Homology	CDS	1368	1592	.	-	0	ID=cds-WP_000106483.1;Parent=gene-C9F04_RS10340;Dbxref=Genbank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9F04_RS10340;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	1589	1744	.	-	.	ID=gene-C9F04_RS10345;Name=C9F04_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10345;old_locus_tag=C9F04_10675
NZ_PYKF01000351.1	Protein Homology	CDS	1589	1744	.	-	0	ID=cds-WP_000546186.1;Parent=gene-C9F04_RS10345;Dbxref=Genbank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9F04_RS10345;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	2056	2712	.	+	.	ID=gene-C9F04_RS10350;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9F04_RS10350;old_locus_tag=C9F04_10680
NZ_PYKF01000351.1	Protein Homology	CDS	2056	2712	.	+	0	ID=cds-WP_000611323.1;Parent=gene-C9F04_RS10350;Dbxref=Genbank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9F04_RS10350;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	2709	4541	.	+	.	ID=gene-C9F04_RS10355;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9F04_RS10355;old_locus_tag=C9F04_10685
NZ_PYKF01000351.1	Protein Homology	CDS	2709	4541	.	+	0	ID=cds-WP_001289468.1;Parent=gene-C9F04_RS10355;Dbxref=Genbank:WP_001289468.1;Name=WP_001289468.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9F04_RS10355;product=excinuclease ABC subunit UvrC;protein_id=WP_001289468.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	4598	5146	.	+	.	ID=gene-C9F04_RS10360;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9F04_RS10360;old_locus_tag=C9F04_10690
NZ_PYKF01000351.1	Protein Homology	CDS	4598	5146	.	+	0	ID=cds-WP_001160192.1;Parent=gene-C9F04_RS10360;Dbxref=Genbank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9F04_RS10360;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	5298	5373	.	+	.	ID=gene-C9F04_RS10365;Name=C9F04_RS10365;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10365;old_locus_tag=C9F04_10695
NZ_PYKF01000351.1	tRNAscan-SE	tRNA	5298	5373	.	+	.	ID=rna-C9F04_RS10365;Parent=gene-C9F04_RS10365;anticodon=(pos:5331..5333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10365;product=tRNA-Gly
NZ_PYKF01000351.1	tRNAscan-SE	exon	5298	5373	.	+	.	ID=exon-C9F04_RS10365-1;Parent=rna-C9F04_RS10365;anticodon=(pos:5331..5333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10365;product=tRNA-Gly
NZ_PYKF01000351.1	RefSeq	gene	5425	5498	.	+	.	ID=gene-C9F04_RS10370;Name=C9F04_RS10370;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10370;old_locus_tag=C9F04_10700
NZ_PYKF01000351.1	tRNAscan-SE	tRNA	5425	5498	.	+	.	ID=rna-C9F04_RS10370;Parent=gene-C9F04_RS10370;anticodon=(pos:5457..5459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10370;product=tRNA-Cys
NZ_PYKF01000351.1	tRNAscan-SE	exon	5425	5498	.	+	.	ID=exon-C9F04_RS10370-1;Parent=rna-C9F04_RS10370;anticodon=(pos:5457..5459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10370;product=tRNA-Cys
NZ_PYKF01000351.1	RefSeq	gene	5510	5596	.	+	.	ID=gene-C9F04_RS10375;Name=C9F04_RS10375;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS10375;old_locus_tag=C9F04_10705
NZ_PYKF01000351.1	tRNAscan-SE	tRNA	5510	5596	.	+	.	ID=rna-C9F04_RS10375;Parent=gene-C9F04_RS10375;anticodon=(pos:5544..5546);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10375;product=tRNA-Leu
NZ_PYKF01000351.1	tRNAscan-SE	exon	5510	5596	.	+	.	ID=exon-C9F04_RS10375-1;Parent=rna-C9F04_RS10375;anticodon=(pos:5544..5546);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS10375;product=tRNA-Leu
NZ_PYKF01000351.1	RefSeq	gene	5847	6179	.	+	.	ID=gene-C9F04_RS10380;Name=C9F04_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10380;old_locus_tag=C9F04_10710
NZ_PYKF01000351.1	Protein Homology	CDS	5847	6179	.	+	0	ID=cds-WP_023139758.1;Parent=gene-C9F04_RS10380;Dbxref=Genbank:WP_023139758.1;Name=WP_023139758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9F04_RS10380;product=hypothetical protein;protein_id=WP_023139758.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	6393	7832	.	+	.	ID=gene-C9F04_RS10385;Name=C9F04_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10385;old_locus_tag=C9F04_10715
NZ_PYKF01000351.1	Protein Homology	CDS	6393	7832	.	+	0	ID=cds-WP_135369689.1;Parent=gene-C9F04_RS10385;Dbxref=Genbank:WP_135369689.1;Name=WP_135369689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9F04_RS10385;product=SH3 domain-containing C40 family peptidase;protein_id=WP_135369689.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	8045	8371	.	+	.	ID=gene-C9F04_RS10390;Name=C9F04_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10390;old_locus_tag=C9F04_10720
NZ_PYKF01000351.1	Protein Homology	CDS	8045	8371	.	+	0	ID=cds-WP_000240837.1;Parent=gene-C9F04_RS10390;Dbxref=Genbank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9F04_RS10390;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	gene	8610	9275	.	+	.	ID=gene-C9F04_RS10395;Name=C9F04_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10395;old_locus_tag=C9F04_10725
NZ_PYKF01000351.1	Protein Homology	CDS	8610	9275	.	+	0	ID=cds-WP_000781521.1;Parent=gene-C9F04_RS10395;Dbxref=Genbank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9F04_RS10395;product=YecA family protein;protein_id=WP_000781521.1;transl_table=11
NZ_PYKF01000351.1	RefSeq	pseudogene	9350	9988	.	-	.	ID=gene-C9F04_RS10400;Name=C9F04_RS10400;end_range=9988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10400;old_locus_tag=C9F04_10730;partial=true;pseudo=true
NZ_PYKF01000351.1	Protein Homology	CDS	9350	9988	.	-	0	ID=cds-C9F04_RS10400;Parent=gene-C9F04_RS10400;Note=tyrosine specific permease%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9F04_RS10400;partial=true;product=tyrosine transporter TyrP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000136.1 1 9985
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000136.1	RefSeq	region	1	9985	.	+	.	ID=NZ_PYKF01000136.1:1..9985;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000136.1	RefSeq	gene	209	1852	.	+	.	ID=gene-C9F04_RS02765;Name=C9F04_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02765;old_locus_tag=C9F04_02865
NZ_PYKF01000136.1	Protein Homology	CDS	209	1852	.	+	0	ID=cds-WP_146712260.1;Parent=gene-C9F04_RS02765;Dbxref=Genbank:WP_146712260.1;Name=WP_146712260.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F04_RS02765;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_146712260.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	2052	2546	.	-	.	ID=gene-C9F04_RS02770;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9F04_RS02770;old_locus_tag=C9F04_02870
NZ_PYKF01000136.1	Protein Homology	CDS	2052	2546	.	-	0	ID=cds-WP_135369555.1;Parent=gene-C9F04_RS02770;Dbxref=Genbank:WP_135369555.1;Name=WP_135369555.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9F04_RS02770;product=serine protease inhibitor ecotin;protein_id=WP_135369555.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	2960	3451	.	+	.	ID=gene-C9F04_RS02775;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9F04_RS02775;old_locus_tag=C9F04_02875
NZ_PYKF01000136.1	Protein Homology	CDS	2960	3451	.	+	0	ID=cds-WP_000228066.1;Parent=gene-C9F04_RS02775;Dbxref=Genbank:WP_000228066.1;Name=WP_000228066.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9F04_RS02775;product=ferredoxin-type protein NapF;protein_id=WP_000228066.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	3441	3704	.	+	.	ID=gene-C9F04_RS02780;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9F04_RS02780;old_locus_tag=C9F04_02880
NZ_PYKF01000136.1	Protein Homology	CDS	3441	3704	.	+	0	ID=cds-WP_001260058.1;Parent=gene-C9F04_RS02780;Dbxref=Genbank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9F04_RS02780;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	3701	6187	.	+	.	ID=gene-C9F04_RS02785;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9F04_RS02785;old_locus_tag=C9F04_02885
NZ_PYKF01000136.1	Protein Homology	CDS	3701	6187	.	+	0	ID=cds-WP_000778097.1;Parent=gene-C9F04_RS02785;Dbxref=Genbank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9F04_RS02785;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	6194	6889	.	+	.	ID=gene-C9F04_RS02790;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9F04_RS02790;old_locus_tag=C9F04_02890
NZ_PYKF01000136.1	Protein Homology	CDS	6194	6889	.	+	0	ID=cds-WP_146712261.1;Parent=gene-C9F04_RS02790;Dbxref=Genbank:WP_146712261.1;Name=WP_146712261.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9F04_RS02790;product=ferredoxin-type protein NapG;protein_id=WP_146712261.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	6876	7745	.	+	.	ID=gene-C9F04_RS02795;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9F04_RS02795;old_locus_tag=C9F04_02895
NZ_PYKF01000136.1	Protein Homology	CDS	6876	7745	.	+	0	ID=cds-WP_135369222.1;Parent=gene-C9F04_RS02795;Dbxref=Genbank:WP_135369222.1;Name=WP_135369222.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9F04_RS02795;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_135369222.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	7861	8310	.	+	.	ID=gene-C9F04_RS02800;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9F04_RS02800;old_locus_tag=C9F04_02905
NZ_PYKF01000136.1	Protein Homology	CDS	7861	8310	.	+	0	ID=cds-WP_000835182.1;Parent=gene-C9F04_RS02800;Dbxref=Genbank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9F04_RS02800;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	8320	8922	.	+	.	ID=gene-C9F04_RS02805;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9F04_RS02805;old_locus_tag=C9F04_02910
NZ_PYKF01000136.1	Protein Homology	CDS	8320	8922	.	+	0	ID=cds-WP_000431778.1;Parent=gene-C9F04_RS02805;Dbxref=Genbank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9F04_RS02805;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	gene	8943	9560	.	+	.	ID=gene-C9F04_RS02810;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9F04_RS02810;old_locus_tag=C9F04_02915
NZ_PYKF01000136.1	Protein Homology	CDS	8943	9560	.	+	0	ID=cds-WP_000888526.1;Parent=gene-C9F04_RS02810;Dbxref=Genbank:WP_000888526.1;Name=WP_000888526.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F04_RS02810;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888526.1;transl_table=11
NZ_PYKF01000136.1	RefSeq	pseudogene	9557	9916	.	+	.	ID=gene-C9F04_RS02815;Name=ccmB;end_range=9916,.;gbkey=Gene;gene=ccmB;gene_biotype=pseudogene;locus_tag=C9F04_RS02815;old_locus_tag=C9F04_02920;partial=true;pseudo=true
NZ_PYKF01000136.1	Protein Homology	CDS	9557	9916	.	+	0	ID=cds-C9F04_RS02815;Parent=gene-C9F04_RS02815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015886,GO:0015232;end_range=9916,.;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9F04_RS02815;partial=true;product=heme exporter protein CcmB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000338.1 1 9982
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000338.1	RefSeq	region	1	9982	.	+	.	ID=NZ_PYKF01000338.1:1..9982;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000338.1	RefSeq	pseudogene	1	758	.	-	.	ID=gene-C9F04_RS09810;Name=C9F04_RS09810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09810;old_locus_tag=C9F04_10125;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000338.1	Protein Homology	CDS	1	758	.	-	0	ID=cds-C9F04_RS09810;Parent=gene-C9F04_RS09810;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9F04_RS09810;partial=true;product=acyl-CoA thioesterase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	996	2219	.	+	.	ID=gene-C9F04_RS09815;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9F04_RS09815;old_locus_tag=C9F04_10130
NZ_PYKF01000338.1	Protein Homology	CDS	996	2219	.	+	0	ID=cds-WP_135369197.1;Parent=gene-C9F04_RS09815;Dbxref=Genbank:WP_135369197.1;Name=WP_135369197.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9F04_RS09815;product=imidazolonepropionase;protein_id=WP_135369197.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	2216	3157	.	+	.	ID=gene-C9F04_RS09820;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9F04_RS09820;old_locus_tag=C9F04_10135
NZ_PYKF01000338.1	Protein Homology	CDS	2216	3157	.	+	0	ID=cds-WP_146712570.1;Parent=gene-C9F04_RS09820;Dbxref=Genbank:WP_146712570.1;Name=WP_146712570.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9F04_RS09820;product=formimidoylglutamase;protein_id=WP_146712570.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	3202	3927	.	+	.	ID=gene-C9F04_RS09825;Name=C9F04_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09825;old_locus_tag=C9F04_10140
NZ_PYKF01000338.1	Protein Homology	CDS	3202	3927	.	+	0	ID=cds-WP_000287413.1;Parent=gene-C9F04_RS09825;Dbxref=Genbank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9F04_RS09825;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	4124	5809	.	+	.	ID=gene-C9F04_RS09830;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9F04_RS09830;old_locus_tag=C9F04_10145
NZ_PYKF01000338.1	Protein Homology	CDS	4124	5809	.	+	0	ID=cds-WP_001115217.1;Parent=gene-C9F04_RS09830;Dbxref=Genbank:WP_001115217.1;Name=WP_001115217.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9F04_RS09830;product=urocanate hydratase;protein_id=WP_001115217.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	5811	7331	.	+	.	ID=gene-C9F04_RS09835;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9F04_RS09835;old_locus_tag=C9F04_10150
NZ_PYKF01000338.1	Protein Homology	CDS	5811	7331	.	+	0	ID=cds-WP_146712571.1;Parent=gene-C9F04_RS09835;Dbxref=Genbank:WP_146712571.1;Name=WP_146712571.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9F04_RS09835;product=histidine ammonia-lyase;protein_id=WP_146712571.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	7416	7892	.	-	.	ID=gene-C9F04_RS09840;Name=C9F04_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09840;old_locus_tag=C9F04_10155
NZ_PYKF01000338.1	Protein Homology	CDS	7416	7892	.	-	0	ID=cds-WP_146712572.1;Parent=gene-C9F04_RS09840;Dbxref=Genbank:WP_146712572.1;Name=WP_146712572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9F04_RS09840;product=kinase inhibitor;protein_id=WP_146712572.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	7950	9239	.	-	.	ID=gene-C9F04_RS09845;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9F04_RS09845;old_locus_tag=C9F04_10160
NZ_PYKF01000338.1	Protein Homology	CDS	7950	9239	.	-	0	ID=cds-WP_000205519.1;Parent=gene-C9F04_RS09845;Dbxref=Genbank:WP_000205519.1;Name=WP_000205519.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9F04_RS09845;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205519.1;transl_table=11
NZ_PYKF01000338.1	RefSeq	gene	9326	9982	.	+	.	ID=gene-C9F04_RS09850;Name=bioB;end_range=9982,.;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9F04_RS09850;old_locus_tag=C9F04_10165;partial=true
NZ_PYKF01000338.1	Protein Homology	CDS	9326	9982	.	+	0	ID=cds-WP_146712573.1;Parent=gene-C9F04_RS09850;Dbxref=Genbank:WP_146712573.1;Name=WP_146712573.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;end_range=9982,.;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9F04_RS09850;partial=true;product=biotin synthase BioB;protein_id=WP_146712573.1;transl_table=11
##sequence-region NZ_PYKF01000342.1 1 9896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000342.1	RefSeq	region	1	9896	.	+	.	ID=NZ_PYKF01000342.1:1..9896;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000342.1	RefSeq	pseudogene	50	727	.	+	.	ID=gene-C9F04_RS10020;Name=C9F04_RS10020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10020;old_locus_tag=C9F04_10340;partial=true;pseudo=true;start_range=.,50
NZ_PYKF01000342.1	Protein Homology	CDS	50	727	.	+	0	ID=cds-C9F04_RS10020;Parent=gene-C9F04_RS10020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F04_RS10020;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,50;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	829	888	.	-	.	ID=gene-C9F04_RS10025;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9F04_RS10025;old_locus_tag=C9F04_10345
NZ_PYKF01000342.1	Protein Homology	CDS	829	888	.	-	0	ID=cds-WP_001386977.1;Parent=gene-C9F04_RS10025;Dbxref=Genbank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9F04_RS10025;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	1301	1657	.	+	.	ID=gene-C9F04_RS10030;Name=C9F04_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10030;old_locus_tag=C9F04_10350
NZ_PYKF01000342.1	Protein Homology	CDS	1301	1657	.	+	0	ID=cds-WP_000631923.1;Parent=gene-C9F04_RS10030;Dbxref=Genbank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9F04_RS10030;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	1661	2788	.	+	.	ID=gene-C9F04_RS10035;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9F04_RS10035;old_locus_tag=C9F04_10355
NZ_PYKF01000342.1	Protein Homology	CDS	1661	2788	.	+	0	ID=cds-WP_001277825.1;Parent=gene-C9F04_RS10035;Dbxref=Genbank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9F04_RS10035;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	2816	3016	.	+	.	ID=gene-C9F04_RS10040;Name=C9F04_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10040;old_locus_tag=C9F04_10360
NZ_PYKF01000342.1	Protein Homology	CDS	2816	3016	.	+	0	ID=cds-WP_146712581.1;Parent=gene-C9F04_RS10040;Dbxref=Genbank:WP_146712581.1;Name=WP_146712581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9F04_RS10040;product=YpfN family protein;protein_id=WP_146712581.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	3043	5061	.	-	.	ID=gene-C9F04_RS10045;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9F04_RS10045;old_locus_tag=C9F04_10365
NZ_PYKF01000342.1	Protein Homology	CDS	3043	5061	.	-	0	ID=cds-WP_146712582.1;Parent=gene-C9F04_RS10045;Dbxref=Genbank:WP_146712582.1;Name=WP_146712582.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9F04_RS10045;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_146712582.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	5077	5940	.	-	.	ID=gene-C9F04_RS10050;Name=C9F04_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10050;old_locus_tag=C9F04_10370
NZ_PYKF01000342.1	Protein Homology	CDS	5077	5940	.	-	0	ID=cds-WP_001267523.1;Parent=gene-C9F04_RS10050;Dbxref=Genbank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9F04_RS10050;product=neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	6071	6784	.	-	.	ID=gene-C9F04_RS10055;Name=C9F04_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10055;old_locus_tag=C9F04_10375
NZ_PYKF01000342.1	Protein Homology	CDS	6071	6784	.	-	0	ID=cds-WP_001171630.1;Parent=gene-C9F04_RS10055;Dbxref=Genbank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9F04_RS10055;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	6959	7993	.	-	.	ID=gene-C9F04_RS10060;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9F04_RS10060;old_locus_tag=C9F04_10380
NZ_PYKF01000342.1	Protein Homology	CDS	6959	7993	.	-	0	ID=cds-WP_000331877.1;Parent=gene-C9F04_RS10060;Dbxref=Genbank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9F04_RS10060;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	8010	8888	.	-	.	ID=gene-C9F04_RS10065;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9F04_RS10065;old_locus_tag=C9F04_10385
NZ_PYKF01000342.1	Protein Homology	CDS	8010	8888	.	-	0	ID=cds-WP_135369675.1;Parent=gene-C9F04_RS10065;Dbxref=Genbank:WP_135369675.1;Name=WP_135369675.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9F04_RS10065;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_135369675.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	9034	9606	.	+	.	ID=gene-C9F04_RS10070;Name=C9F04_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10070;old_locus_tag=C9F04_10390
NZ_PYKF01000342.1	Protein Homology	CDS	9034	9606	.	+	0	ID=cds-WP_000189061.1;Parent=gene-C9F04_RS10070;Dbxref=Genbank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9F04_RS10070;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11
NZ_PYKF01000342.1	RefSeq	gene	9606	9896	.	+	.	ID=gene-C9F04_RS10075;Name=bcp;end_range=9896,.;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9F04_RS10075;old_locus_tag=C9F04_10395;partial=true
NZ_PYKF01000342.1	Protein Homology	CDS	9606	9896	.	+	0	ID=cds-WP_146712583.1;Parent=gene-C9F04_RS10075;Dbxref=Genbank:WP_146712583.1;Name=WP_146712583.1;Ontology_term=GO:0016209,GO:0016491;end_range=9896,.;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=C9F04_RS10075;partial=true;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_146712583.1;transl_table=11
##sequence-region NZ_PYKF01000229.1 1 9895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000229.1	RefSeq	region	1	9895	.	+	.	ID=NZ_PYKF01000229.1:1..9895;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000229.1	RefSeq	gene	1	228	.	-	.	ID=gene-C9F04_RS05910;Name=C9F04_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05910;old_locus_tag=C9F04_06100;partial=true;start_range=.,1
NZ_PYKF01000229.1	Protein Homology	CDS	1	228	.	-	0	ID=cds-WP_146712406.1;Parent=gene-C9F04_RS05910;Dbxref=Genbank:WP_146712406.1;Name=WP_146712406.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9F04_RS05910;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146712406.1;start_range=.,1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	230	997	.	-	.	ID=gene-C9F04_RS05915;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9F04_RS05915;old_locus_tag=C9F04_06105
NZ_PYKF01000229.1	Protein Homology	CDS	230	997	.	-	0	ID=cds-WP_000082083.1;Parent=gene-C9F04_RS05915;Dbxref=Genbank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9F04_RS05915;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	994	2271	.	-	.	ID=gene-C9F04_RS05920;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9F04_RS05920;old_locus_tag=C9F04_06110
NZ_PYKF01000229.1	Protein Homology	CDS	994	2271	.	-	0	ID=cds-WP_000803764.1;Parent=gene-C9F04_RS05920;Dbxref=Genbank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9F04_RS05920;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	2268	3194	.	-	.	ID=gene-C9F04_RS05925;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9F04_RS05925;old_locus_tag=C9F04_06115
NZ_PYKF01000229.1	Protein Homology	CDS	2268	3194	.	-	0	ID=cds-WP_146712407.1;Parent=gene-C9F04_RS05925;Dbxref=Genbank:WP_146712407.1;Name=WP_146712407.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=livH;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9F04_RS05925;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_146712407.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	3254	4363	.	-	.	ID=gene-C9F04_RS05930;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9F04_RS05930;old_locus_tag=C9F04_06120
NZ_PYKF01000229.1	Protein Homology	CDS	3254	4363	.	-	0	ID=cds-WP_000822976.1;Parent=gene-C9F04_RS05930;Dbxref=Genbank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9F04_RS05930;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	4785	5168	.	+	.	ID=gene-C9F04_RS05935;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9F04_RS05935;old_locus_tag=C9F04_06125
NZ_PYKF01000229.1	Protein Homology	CDS	4785	5168	.	+	0	ID=cds-WP_000778873.1;Parent=gene-C9F04_RS05935;Dbxref=Genbank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9F04_RS05935;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	5146	5280	.	+	.	ID=gene-C9F04_RS05940;Name=C9F04_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05940;old_locus_tag=C9F04_06130
NZ_PYKF01000229.1	Protein Homology	CDS	5146	5280	.	+	0	ID=cds-WP_001517957.1;Parent=gene-C9F04_RS05940;Dbxref=Genbank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9F04_RS05940;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	5364	6467	.	-	.	ID=gene-C9F04_RS05945;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9F04_RS05945;old_locus_tag=C9F04_06135
NZ_PYKF01000229.1	Protein Homology	CDS	5364	6467	.	-	0	ID=cds-WP_001528146.1;Parent=gene-C9F04_RS05945;Dbxref=Genbank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9F04_RS05945;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	6789	7643	.	-	.	ID=gene-C9F04_RS05950;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9F04_RS05950;old_locus_tag=C9F04_06140
NZ_PYKF01000229.1	Protein Homology	CDS	6789	7643	.	-	0	ID=cds-WP_000159621.1;Parent=gene-C9F04_RS05950;Dbxref=Genbank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9F04_RS05950;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	7889	8944	.	-	.	ID=gene-C9F04_RS05955;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9F04_RS05955;old_locus_tag=C9F04_06145
NZ_PYKF01000229.1	Protein Homology	CDS	7889	8944	.	-	0	ID=cds-WP_001081707.1;Parent=gene-C9F04_RS05955;Dbxref=Genbank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9F04_RS05955;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	gene	8937	9605	.	-	.	ID=gene-C9F04_RS05960;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9F04_RS05960;old_locus_tag=C9F04_06150
NZ_PYKF01000229.1	Protein Homology	CDS	8937	9605	.	-	0	ID=cds-WP_000617729.1;Parent=gene-C9F04_RS05960;Dbxref=Genbank:WP_000617729.1;Name=WP_000617729.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9F04_RS05960;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11
NZ_PYKF01000229.1	RefSeq	pseudogene	9608	9895	.	-	.	ID=gene-C9F04_RS05965;Name=C9F04_RS05965;end_range=9895,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05965;old_locus_tag=C9F04_06155;partial=true;pseudo=true
NZ_PYKF01000229.1	Protein Homology	CDS	9608	9895	.	-	0	ID=cds-C9F04_RS05965;Parent=gene-C9F04_RS05965;Note=cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9F04_RS05965;partial=true;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000401.1 1 9892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000401.1	RefSeq	region	1	9892	.	+	.	ID=NZ_PYKF01000401.1:1..9892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000401.1	RefSeq	gene	1	428	.	+	.	ID=gene-C9F04_RS11875;Name=C9F04_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11875;old_locus_tag=C9F04_12285;partial=true;start_range=.,1
NZ_PYKF01000401.1	Protein Homology	CDS	1	428	.	+	2	ID=cds-WP_146712670.1;Parent=gene-C9F04_RS11875;Dbxref=Genbank:WP_146712670.1;Name=WP_146712670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F04_RS11875;partial=true;product=UTRA domain-containing protein;protein_id=WP_146712670.1;start_range=.,1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	604	1581	.	+	.	ID=gene-C9F04_RS11880;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9F04_RS11880;old_locus_tag=C9F04_12290
NZ_PYKF01000401.1	Protein Homology	CDS	604	1581	.	+	0	ID=cds-WP_146712671.1;Parent=gene-C9F04_RS11880;Dbxref=Genbank:WP_146712671.1;Name=WP_146712671.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9F04_RS11880;product=6-phosphofructose-aspartate deglycase;protein_id=WP_146712671.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	1645	2490	.	+	.	ID=gene-C9F04_RS11885;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9F04_RS11885;old_locus_tag=C9F04_12295
NZ_PYKF01000401.1	Protein Homology	CDS	1645	2490	.	+	0	ID=cds-WP_023232291.1;Parent=gene-C9F04_RS11885;Dbxref=Genbank:WP_023232291.1;Name=WP_023232291.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9F04_RS11885;product=fructose-aspartate kinase;protein_id=WP_023232291.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	2544	3863	.	+	.	ID=gene-C9F04_RS11890;Name=C9F04_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11890;old_locus_tag=C9F04_12300
NZ_PYKF01000401.1	Protein Homology	CDS	2544	3863	.	+	0	ID=cds-WP_146712672.1;Parent=gene-C9F04_RS11890;Dbxref=Genbank:WP_146712672.1;Name=WP_146712672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F04_RS11890;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_146712672.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	3922	4965	.	+	.	ID=gene-C9F04_RS11895;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=C9F04_RS11895;old_locus_tag=C9F04_12305
NZ_PYKF01000401.1	Protein Homology	CDS	3922	4965	.	+	0	ID=cds-WP_146712673.1;Parent=gene-C9F04_RS11895;Dbxref=Genbank:WP_146712673.1;Name=WP_146712673.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F04_RS11895;product=fructose-asparagine asparaginase;protein_id=WP_146712673.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	5012	6364	.	-	.	ID=gene-C9F04_RS11900;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9F04_RS11900;old_locus_tag=C9F04_12310
NZ_PYKF01000401.1	Protein Homology	CDS	5012	6364	.	-	0	ID=cds-WP_146712674.1;Parent=gene-C9F04_RS11900;Dbxref=Genbank:WP_146712674.1;Name=WP_146712674.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9F04_RS11900;product=glutathione-disulfide reductase;protein_id=WP_146712674.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	6469	7311	.	-	.	ID=gene-C9F04_RS11905;Name=C9F04_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11905;old_locus_tag=C9F04_12315
NZ_PYKF01000401.1	Protein Homology	CDS	6469	7311	.	-	0	ID=cds-WP_146712675.1;Parent=gene-C9F04_RS11905;Dbxref=Genbank:WP_146712675.1;Name=WP_146712675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9F04_RS11905;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_146712675.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	7432	7875	.	-	.	ID=gene-C9F04_RS11910;Name=C9F04_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11910;old_locus_tag=C9F04_12320
NZ_PYKF01000401.1	Protein Homology	CDS	7432	7875	.	-	0	ID=cds-WP_000209571.1;Parent=gene-C9F04_RS11910;Dbxref=Genbank:WP_000209571.1;Name=WP_000209571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209569.1;locus_tag=C9F04_RS11910;product=hypothetical protein;protein_id=WP_000209571.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	8153	8806	.	+	.	ID=gene-C9F04_RS11915;Name=C9F04_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11915;old_locus_tag=C9F04_12325
NZ_PYKF01000401.1	Protein Homology	CDS	8153	8806	.	+	0	ID=cds-WP_000469192.1;Parent=gene-C9F04_RS11915;Dbxref=Genbank:WP_000469192.1;Name=WP_000469192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=C9F04_RS11915;product=hypothetical protein;protein_id=WP_000469192.1;transl_table=11
NZ_PYKF01000401.1	RefSeq	gene	8969	9892	.	+	.	ID=gene-C9F04_RS11920;Name=C9F04_RS11920;end_range=9892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11920;old_locus_tag=C9F04_12330;partial=true
NZ_PYKF01000401.1	Protein Homology	CDS	8969	9892	.	+	0	ID=cds-WP_261770991.1;Parent=gene-C9F04_RS11920;Dbxref=Genbank:WP_261770991.1;Name=WP_261770991.1;Ontology_term=GO:0006260;end_range=9892,.;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229318.1;locus_tag=C9F04_RS11920;partial=true;product=replication endonuclease;protein_id=WP_261770991.1;transl_table=11
##sequence-region NZ_PYKF01000632.1 1 9892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000632.1	RefSeq	region	1	9892	.	+	.	ID=NZ_PYKF01000632.1:1..9892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000632.1	RefSeq	gene	1	216	.	+	.	ID=gene-C9F04_RS19210;Name=C9F04_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19210;old_locus_tag=C9F04_19835;partial=true;start_range=.,1
NZ_PYKF01000632.1	Protein Homology	CDS	1	216	.	+	0	ID=cds-WP_146713029.1;Parent=gene-C9F04_RS19210;Dbxref=Genbank:WP_146713029.1;Name=WP_146713029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9F04_RS19210;partial=true;product=hypothetical protein;protein_id=WP_146713029.1;start_range=.,1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	229	723	.	+	.	ID=gene-C9F04_RS19215;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9F04_RS19215;old_locus_tag=C9F04_19840
NZ_PYKF01000632.1	Protein Homology	CDS	229	723	.	+	0	ID=cds-WP_000606266.1;Parent=gene-C9F04_RS19215;Dbxref=Genbank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9F04_RS19215;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	771	1823	.	+	.	ID=gene-C9F04_RS19220;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9F04_RS19220;old_locus_tag=C9F04_19845
NZ_PYKF01000632.1	Protein Homology	CDS	771	1823	.	+	0	ID=cds-WP_000753665.1;Parent=gene-C9F04_RS19220;Dbxref=Genbank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9F04_RS19220;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	2023	3300	.	-	.	ID=gene-C9F04_RS19225;Name=C9F04_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19225;old_locus_tag=C9F04_19855
NZ_PYKF01000632.1	Protein Homology	CDS	2023	3300	.	-	0	ID=cds-WP_146713030.1;Parent=gene-C9F04_RS19225;Dbxref=Genbank:WP_146713030.1;Name=WP_146713030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=C9F04_RS19225;product=DUF1963 domain-containing protein;protein_id=WP_146713030.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	3429	3758	.	-	.	ID=gene-C9F04_RS19230;Name=C9F04_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19230;old_locus_tag=C9F04_19860
NZ_PYKF01000632.1	Protein Homology	CDS	3429	3758	.	-	0	ID=cds-WP_001194345.1;Parent=gene-C9F04_RS19230;Dbxref=Genbank:WP_001194345.1;Name=WP_001194345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9F04_RS19230;product=hypothetical protein;protein_id=WP_001194345.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	3779	4678	.	-	.	ID=gene-C9F04_RS19235;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9F04_RS19235;old_locus_tag=C9F04_19865
NZ_PYKF01000632.1	Protein Homology	CDS	3779	4678	.	-	0	ID=cds-WP_000801330.1;Parent=gene-C9F04_RS19235;Dbxref=Genbank:WP_000801330.1;Name=WP_000801330.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9F04_RS19235;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801330.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	4681	5550	.	-	.	ID=gene-C9F04_RS19240;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9F04_RS19240;old_locus_tag=C9F04_19870
NZ_PYKF01000632.1	Protein Homology	CDS	4681	5550	.	-	0	ID=cds-WP_000102880.1;Parent=gene-C9F04_RS19240;Dbxref=Genbank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9F04_RS19240;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	5763	6188	.	+	.	ID=gene-C9F04_RS19245;Name=C9F04_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19245;old_locus_tag=C9F04_19875
NZ_PYKF01000632.1	Protein Homology	CDS	5763	6188	.	+	0	ID=cds-WP_186799058.1;Parent=gene-C9F04_RS19245;Dbxref=Genbank:WP_186799058.1;Name=WP_186799058.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9F04_RS19245;product=GNAT family acetyltransferase;protein_id=WP_186799058.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	6175	6624	.	+	.	ID=gene-C9F04_RS19250;Name=C9F04_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19250;old_locus_tag=C9F04_19880
NZ_PYKF01000632.1	Protein Homology	CDS	6175	6624	.	+	0	ID=cds-WP_146713032.1;Parent=gene-C9F04_RS19250;Dbxref=Genbank:WP_146713032.1;Name=WP_146713032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9F04_RS19250;product=DUF2919 domain-containing protein;protein_id=WP_146713032.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	6686	7261	.	+	.	ID=gene-C9F04_RS19255;Name=C9F04_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19255;old_locus_tag=C9F04_19885
NZ_PYKF01000632.1	Protein Homology	CDS	6686	7261	.	+	0	ID=cds-WP_000838971.1;Parent=gene-C9F04_RS19255;Dbxref=Genbank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9F04_RS19255;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	7356	8255	.	+	.	ID=gene-C9F04_RS19260;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=C9F04_RS19260;old_locus_tag=C9F04_19890
NZ_PYKF01000632.1	Protein Homology	CDS	7356	8255	.	+	0	ID=cds-WP_000084583.1;Parent=gene-C9F04_RS19260;Dbxref=Genbank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9F04_RS19260;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	8503	9294	.	+	.	ID=gene-C9F04_RS19265;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9F04_RS19265;old_locus_tag=C9F04_19895
NZ_PYKF01000632.1	Protein Homology	CDS	8503	9294	.	+	0	ID=cds-WP_000517460.1;Parent=gene-C9F04_RS19265;Dbxref=Genbank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9F04_RS19265;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11
NZ_PYKF01000632.1	RefSeq	gene	9452	9892	.	+	.	ID=gene-C9F04_RS19270;Name=C9F04_RS19270;end_range=9892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19270;old_locus_tag=C9F04_19900;partial=true
NZ_PYKF01000632.1	Protein Homology	CDS	9452	9892	.	+	0	ID=cds-WP_146713033.1;Parent=gene-C9F04_RS19270;Dbxref=Genbank:WP_146713033.1;Name=WP_146713033.1;Ontology_term=GO:0008272,GO:0015419,GO:0043199,GO:0030288,GO:0031362,GO:0055052;end_range=9892,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA,sulfate binding|0043199||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9F04_RS19270;partial=true;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_146713033.1;transl_table=11
##sequence-region NZ_PYKF01000565.1 1 9891
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000565.1	RefSeq	region	1	9891	.	+	.	ID=NZ_PYKF01000565.1:1..9891;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000565.1	RefSeq	gene	1	3126	.	-	.	ID=gene-C9F04_RS16870;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9F04_RS16870;old_locus_tag=C9F04_17410;partial=true;start_range=.,1
NZ_PYKF01000565.1	Protein Homology	CDS	1	3126	.	-	0	ID=cds-WP_146712914.1;Parent=gene-C9F04_RS16870;Dbxref=Genbank:WP_146712914.1;Name=WP_146712914.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9F04_RS16870;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_146712914.1;start_range=.,1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	3187	3486	.	-	.	ID=gene-C9F04_RS16875;Name=C9F04_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16875;old_locus_tag=C9F04_17415
NZ_PYKF01000565.1	Protein Homology	CDS	3187	3486	.	-	0	ID=cds-WP_031607555.1;Parent=gene-C9F04_RS16875;Dbxref=Genbank:WP_031607555.1;Name=WP_031607555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9F04_RS16875;product=hypothetical protein;protein_id=WP_031607555.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	3402	3668	.	+	.	ID=gene-C9F04_RS16880;Name=C9F04_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16880;old_locus_tag=C9F04_17420
NZ_PYKF01000565.1	Protein Homology	CDS	3402	3668	.	+	0	ID=cds-WP_001200679.1;Parent=gene-C9F04_RS16880;Dbxref=Genbank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9F04_RS16880;product=DUF333 domain-containing protein;protein_id=WP_001200679.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	3712	4122	.	-	.	ID=gene-C9F04_RS16885;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9F04_RS16885;old_locus_tag=C9F04_17425
NZ_PYKF01000565.1	Protein Homology	CDS	3712	4122	.	-	0	ID=cds-WP_000725242.1;Parent=gene-C9F04_RS16885;Dbxref=Genbank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9F04_RS16885;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	4233	5222	.	-	.	ID=gene-C9F04_RS16890;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9F04_RS16890;old_locus_tag=C9F04_17430
NZ_PYKF01000565.1	Protein Homology	CDS	4233	5222	.	-	0	ID=cds-WP_000762206.1;Parent=gene-C9F04_RS16890;Dbxref=Genbank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9F04_RS16890;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	5462	8098	.	+	.	ID=gene-C9F04_RS16895;Name=C9F04_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16895;old_locus_tag=C9F04_17435
NZ_PYKF01000565.1	Protein Homology	CDS	5462	8098	.	+	0	ID=cds-WP_146712915.1;Parent=gene-C9F04_RS16895;Dbxref=Genbank:WP_146712915.1;Name=WP_146712915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9F04_RS16895;product=YdbH family protein;protein_id=WP_146712915.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	8098	8289	.	+	.	ID=gene-C9F04_RS16900;Name=C9F04_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16900;old_locus_tag=C9F04_17440
NZ_PYKF01000565.1	Protein Homology	CDS	8098	8289	.	+	0	ID=cds-WP_000784063.1;Parent=gene-C9F04_RS16900;Dbxref=Genbank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9F04_RS16900;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	8297	8620	.	+	.	ID=gene-C9F04_RS16905;Name=C9F04_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16905;old_locus_tag=C9F04_17445
NZ_PYKF01000565.1	Protein Homology	CDS	8297	8620	.	+	0	ID=cds-WP_050067624.1;Parent=gene-C9F04_RS16905;Dbxref=Genbank:WP_050067624.1;Name=WP_050067624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9F04_RS16905;product=YdbL family protein;protein_id=WP_050067624.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	8765	9361	.	+	.	ID=gene-C9F04_RS16910;Name=C9F04_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16910;old_locus_tag=C9F04_17450
NZ_PYKF01000565.1	Protein Homology	CDS	8765	9361	.	+	0	ID=cds-WP_135369747.1;Parent=gene-C9F04_RS16910;Dbxref=Genbank:WP_135369747.1;Name=WP_135369747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177492.1;locus_tag=C9F04_RS16910;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_135369747.1;transl_table=11
NZ_PYKF01000565.1	RefSeq	gene	9358	9891	.	+	.	ID=gene-C9F04_RS16915;Name=C9F04_RS16915;end_range=9891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16915;old_locus_tag=C9F04_17455;partial=true
NZ_PYKF01000565.1	Protein Homology	CDS	9358	9891	.	+	0	ID=cds-WP_186799050.1;Parent=gene-C9F04_RS16915;Dbxref=Genbank:WP_186799050.1;Name=WP_186799050.1;end_range=9891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=C9F04_RS16915;partial=true;product=phosphatidate cytidylyltransferase;protein_id=WP_186799050.1;transl_table=11
##sequence-region NZ_PYKF01000567.1 1 9884
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000567.1	RefSeq	region	1	9884	.	+	.	ID=NZ_PYKF01000567.1:1..9884;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000567.1	RefSeq	pseudogene	1	598	.	+	.	ID=gene-C9F04_RS16930;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=pseudogene;locus_tag=C9F04_RS16930;old_locus_tag=C9F04_17475;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000567.1	Protein Homology	CDS	1	598	.	+	1	ID=cds-C9F04_RS16930;Parent=gene-C9F04_RS16930;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9F04_RS16930;partial=true;product=two-component system sensor histidine kinase PgtB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	588	1835	.	+	.	ID=gene-C9F04_RS16935;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9F04_RS16935;old_locus_tag=C9F04_17480
NZ_PYKF01000567.1	Protein Homology	CDS	588	1835	.	+	0	ID=cds-WP_146712919.1;Parent=gene-C9F04_RS16935;Dbxref=Genbank:WP_146712919.1;Name=WP_146712919.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9F04_RS16935;product=two-component system response regulator PgtA;protein_id=WP_146712919.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	2103	3041	.	+	.	ID=gene-C9F04_RS16940;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9F04_RS16940;old_locus_tag=C9F04_17485
NZ_PYKF01000567.1	Protein Homology	CDS	2103	3041	.	+	0	ID=cds-WP_023244699.1;Parent=gene-C9F04_RS16940;Dbxref=Genbank:WP_023244699.1;Name=WP_023244699.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9F04_RS16940;product=omptin family outer membrane protease PgtE;protein_id=WP_023244699.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	3785	4414	.	-	.	ID=gene-C9F04_RS16945;Name=C9F04_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16945;old_locus_tag=C9F04_17490
NZ_PYKF01000567.1	GeneMarkS-2+	CDS	3785	4414	.	-	0	ID=cds-WP_063808707.1;Parent=gene-C9F04_RS16945;Dbxref=Genbank:WP_063808707.1;Name=WP_063808707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS16945;product=hypothetical protein;protein_id=WP_063808707.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	4411	6432	.	-	.	ID=gene-C9F04_RS16950;Name=C9F04_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16950;old_locus_tag=C9F04_17495
NZ_PYKF01000567.1	Protein Homology	CDS	4411	6432	.	-	0	ID=cds-WP_063808708.1;Parent=gene-C9F04_RS16950;Dbxref=Genbank:WP_063808708.1;Name=WP_063808708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093896.1;locus_tag=C9F04_RS16950;product=AAA family ATPase;protein_id=WP_063808708.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	6873	7145	.	-	.	ID=gene-C9F04_RS16955;Name=C9F04_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16955;old_locus_tag=C9F04_17500
NZ_PYKF01000567.1	Protein Homology	CDS	6873	7145	.	-	0	ID=cds-WP_001185339.1;Parent=gene-C9F04_RS16955;Dbxref=Genbank:WP_001185339.1;Name=WP_001185339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=C9F04_RS16955;product=ogr/Delta-like zinc finger family protein;protein_id=WP_001185339.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	7145	7906	.	-	.	ID=gene-C9F04_RS16960;Name=C9F04_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16960;old_locus_tag=C9F04_17505
NZ_PYKF01000567.1	Protein Homology	CDS	7145	7906	.	-	0	ID=cds-WP_135369715.1;Parent=gene-C9F04_RS16960;Dbxref=Genbank:WP_135369715.1;Name=WP_135369715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=C9F04_RS16960;product=septation initiation protein;protein_id=WP_135369715.1;transl_table=11
NZ_PYKF01000567.1	RefSeq	gene	8308	9884	.	-	.	ID=gene-C9F04_RS16965;Name=C9F04_RS16965;end_range=9884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16965;old_locus_tag=C9F04_17510;partial=true
NZ_PYKF01000567.1	Protein Homology	CDS	8308	9884	.	-	2	ID=cds-WP_146712918.1;Parent=gene-C9F04_RS16965;Dbxref=Genbank:WP_146712918.1;Name=WP_146712918.1;end_range=9884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857086.1;locus_tag=C9F04_RS16965;partial=true;product=DUF927 domain-containing protein;protein_id=WP_146712918.1;transl_table=11
##sequence-region NZ_PYKF01000615.1 1 23120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000615.1	RefSeq	region	1	23120	.	+	.	ID=NZ_PYKF01000615.1:1..23120;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000615.1	RefSeq	gene	1	588	.	+	.	ID=gene-C9F04_RS18470;Name=C9F04_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18470;old_locus_tag=C9F04_19075;partial=true;start_range=.,1
NZ_PYKF01000615.1	Protein Homology	CDS	1	588	.	+	0	ID=cds-WP_146712997.1;Parent=gene-C9F04_RS18470;Dbxref=Genbank:WP_146712997.1;Name=WP_146712997.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9F04_RS18470;partial=true;product=mechanosensitive ion channel;protein_id=WP_146712997.1;start_range=.,1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	725	1045	.	-	.	ID=gene-C9F04_RS18475;Name=C9F04_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18475;old_locus_tag=C9F04_19080
NZ_PYKF01000615.1	Protein Homology	CDS	725	1045	.	-	0	ID=cds-WP_001736544.1;Parent=gene-C9F04_RS18475;Dbxref=Genbank:WP_001736544.1;Name=WP_001736544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=C9F04_RS18475;product=hypothetical protein;protein_id=WP_001736544.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	1110	2612	.	-	.	ID=gene-C9F04_RS18480;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9F04_RS18480;old_locus_tag=C9F04_19085
NZ_PYKF01000615.1	Protein Homology	CDS	1110	2612	.	-	0	ID=cds-WP_146712998.1;Parent=gene-C9F04_RS18480;Dbxref=Genbank:WP_146712998.1;Name=WP_146712998.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9F04_RS18480;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_146712998.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	2838	3815	.	-	.	ID=gene-C9F04_RS18485;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9F04_RS18485;old_locus_tag=C9F04_19090
NZ_PYKF01000615.1	Protein Homology	CDS	2838	3815	.	-	0	ID=cds-WP_000004797.1;Parent=gene-C9F04_RS18485;Dbxref=Genbank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9F04_RS18485;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	4138	5928	.	+	.	ID=gene-C9F04_RS18490;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9F04_RS18490;old_locus_tag=C9F04_19095
NZ_PYKF01000615.1	Protein Homology	CDS	4138	5928	.	+	0	ID=cds-WP_001192954.1;Parent=gene-C9F04_RS18490;Dbxref=Genbank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9F04_RS18490;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	5921	6655	.	+	.	ID=gene-C9F04_RS18495;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9F04_RS18495;old_locus_tag=C9F04_19100
NZ_PYKF01000615.1	Protein Homology	CDS	5921	6655	.	+	0	ID=cds-WP_000829509.1;Parent=gene-C9F04_RS18495;Dbxref=Genbank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9F04_RS18495;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	6666	7061	.	+	.	ID=gene-C9F04_RS18500;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9F04_RS18500;old_locus_tag=C9F04_19105
NZ_PYKF01000615.1	Protein Homology	CDS	6666	7061	.	+	0	ID=cds-WP_000208749.1;Parent=gene-C9F04_RS18500;Dbxref=Genbank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9F04_RS18500;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	7072	7431	.	+	.	ID=gene-C9F04_RS18505;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9F04_RS18505;old_locus_tag=C9F04_19110
NZ_PYKF01000615.1	Protein Homology	CDS	7072	7431	.	+	0	ID=cds-WP_000609650.1;Parent=gene-C9F04_RS18505;Dbxref=Genbank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9F04_RS18505;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	7542	8075	.	+	.	ID=gene-C9F04_RS18510;Name=C9F04_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18510;old_locus_tag=C9F04_19115
NZ_PYKF01000615.1	Protein Homology	CDS	7542	8075	.	+	0	ID=cds-WP_001221670.1;Parent=gene-C9F04_RS18510;Dbxref=Genbank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9F04_RS18510;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	8092	8409	.	-	.	ID=gene-C9F04_RS18515;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9F04_RS18515;old_locus_tag=C9F04_19120
NZ_PYKF01000615.1	Protein Homology	CDS	8092	8409	.	-	0	ID=cds-WP_000118469.1;Parent=gene-C9F04_RS18515;Dbxref=Genbank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;gene=sugE;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9F04_RS18515;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	8665	9252	.	+	.	ID=gene-C9F04_RS18520;Name=C9F04_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18520;old_locus_tag=C9F04_19125
NZ_PYKF01000615.1	Protein Homology	CDS	8665	9252	.	+	0	ID=cds-WP_000912959.1;Parent=gene-C9F04_RS18520;Dbxref=Genbank:WP_000912959.1;Name=WP_000912959.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9F04_RS18520;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_000912959.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	9283	9429	.	-	.	ID=gene-C9F04_RS18525;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9F04_RS18525;old_locus_tag=C9F04_19130
NZ_PYKF01000615.1	Protein Homology	CDS	9283	9429	.	-	0	ID=cds-WP_000239598.1;Parent=gene-C9F04_RS18525;Dbxref=Genbank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9F04_RS18525;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	9537	9671	.	-	.	ID=gene-C9F04_RS18530;Name=C9F04_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18530;old_locus_tag=C9F04_19140
NZ_PYKF01000615.1	Protein Homology	CDS	9537	9671	.	-	0	ID=cds-WP_000977687.1;Parent=gene-C9F04_RS18530;Dbxref=Genbank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9F04_RS18530;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	9732	10298	.	-	.	ID=gene-C9F04_RS18535;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9F04_RS18535;old_locus_tag=C9F04_19145
NZ_PYKF01000615.1	Protein Homology	CDS	9732	10298	.	-	0	ID=cds-WP_000257282.1;Parent=gene-C9F04_RS18535;Dbxref=Genbank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9F04_RS18535;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	10339	11367	.	+	.	ID=gene-C9F04_RS18540;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9F04_RS18540;old_locus_tag=C9F04_19150
NZ_PYKF01000615.1	Protein Homology	CDS	10339	11367	.	+	0	ID=cds-WP_079954615.1;Parent=gene-C9F04_RS18540;Dbxref=Genbank:WP_079954615.1;Name=WP_079954615.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9F04_RS18540;product=EF-P beta-lysylation protein EpmB;protein_id=WP_079954615.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	11649	12506	.	+	.	ID=gene-C9F04_RS18545;Name=C9F04_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18545;old_locus_tag=C9F04_19155
NZ_PYKF01000615.1	Protein Homology	CDS	11649	12506	.	+	0	ID=cds-WP_001229225.1;Parent=gene-C9F04_RS18545;Dbxref=Genbank:WP_001229225.1;Name=WP_001229225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9F04_RS18545;product=YjeJ family protein;protein_id=WP_001229225.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	12554	12907	.	-	.	ID=gene-C9F04_RS18550;Name=C9F04_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18550;old_locus_tag=C9F04_19160
NZ_PYKF01000615.1	Protein Homology	CDS	12554	12907	.	-	0	ID=cds-WP_146712999.1;Parent=gene-C9F04_RS18550;Dbxref=Genbank:WP_146712999.1;Name=WP_146712999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9F04_RS18550;product=DUF4156 domain-containing protein;protein_id=WP_146712999.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	13151	14797	.	-	.	ID=gene-C9F04_RS18555;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9F04_RS18555;old_locus_tag=C9F04_19165
NZ_PYKF01000615.1	Protein Homology	CDS	13151	14797	.	-	0	ID=cds-WP_146713000.1;Parent=gene-C9F04_RS18555;Dbxref=Genbank:WP_146713000.1;Name=WP_146713000.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9F04_RS18555;product=chaperonin GroEL;protein_id=WP_146713000.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	14841	15134	.	-	.	ID=gene-C9F04_RS18560;Name=C9F04_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18560;old_locus_tag=C9F04_19170
NZ_PYKF01000615.1	Protein Homology	CDS	14841	15134	.	-	0	ID=cds-WP_000027827.1;Parent=gene-C9F04_RS18560;Dbxref=Genbank:WP_000027827.1;Name=WP_000027827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9F04_RS18560;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	15410	16651	.	+	.	ID=gene-C9F04_RS18565;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9F04_RS18565;old_locus_tag=C9F04_19175
NZ_PYKF01000615.1	Protein Homology	CDS	15410	16651	.	+	0	ID=cds-WP_135369524.1;Parent=gene-C9F04_RS18565;Dbxref=Genbank:WP_135369524.1;Name=WP_135369524.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9F04_RS18565;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_135369524.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	16710	17186	.	-	.	ID=gene-C9F04_RS18570;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=C9F04_RS18570;old_locus_tag=C9F04_19180
NZ_PYKF01000615.1	Protein Homology	CDS	16710	17186	.	-	0	ID=cds-WP_001267291.1;Parent=gene-C9F04_RS18570;Dbxref=Genbank:WP_001267291.1;Name=WP_001267291.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9F04_RS18570;product=membrane protein FxsA;protein_id=WP_001267291.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	17527	18963	.	+	.	ID=gene-C9F04_RS18575;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9F04_RS18575;old_locus_tag=C9F04_19185
NZ_PYKF01000615.1	Protein Homology	CDS	17527	18963	.	+	0	ID=cds-WP_000069440.1;Parent=gene-C9F04_RS18575;Dbxref=Genbank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9F04_RS18575;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	19078	20379	.	+	.	ID=gene-C9F04_RS18580;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9F04_RS18580;old_locus_tag=C9F04_19190
NZ_PYKF01000615.1	Protein Homology	CDS	19078	20379	.	+	0	ID=cds-WP_000637595.1;Parent=gene-C9F04_RS18580;Dbxref=Genbank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9F04_RS18580;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	20500	20847	.	+	.	ID=gene-C9F04_RS18585;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9F04_RS18585;old_locus_tag=C9F04_19195
NZ_PYKF01000615.1	Protein Homology	CDS	20500	20847	.	+	0	ID=cds-WP_000887832.1;Parent=gene-C9F04_RS18585;Dbxref=Genbank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9F04_RS18585;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	20823	22526	.	+	.	ID=gene-C9F04_RS18590;Name=C9F04_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18590;old_locus_tag=C9F04_19200
NZ_PYKF01000615.1	Protein Homology	CDS	20823	22526	.	+	0	ID=cds-WP_001651309.1;Parent=gene-C9F04_RS18590;Dbxref=Genbank:WP_001651309.1;Name=WP_001651309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9F04_RS18590;product=protein-disulfide reductase DsbD;protein_id=WP_001651309.1;transl_table=11
NZ_PYKF01000615.1	RefSeq	gene	22563	23120	.	+	.	ID=gene-C9F04_RS18595;Name=C9F04_RS18595;end_range=23120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18595;old_locus_tag=C9F04_19205;partial=true
NZ_PYKF01000615.1	Protein Homology	CDS	22563	23120	.	+	0	ID=cds-WP_146713001.1;Parent=gene-C9F04_RS18595;Dbxref=Genbank:WP_146713001.1;Name=WP_146713001.1;Ontology_term=GO:0003677;end_range=23120,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178927.1;locus_tag=C9F04_RS18595;partial=true;product=transcriptional regulator;protein_id=WP_146713001.1;transl_table=11
##sequence-region NZ_PYKF01000301.1 1 9877
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000301.1	RefSeq	region	1	9877	.	+	.	ID=NZ_PYKF01000301.1:1..9877;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000301.1	RefSeq	gene	1	1120	.	+	.	ID=gene-C9F04_RS08875;Name=C9F04_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08875;old_locus_tag=C9F04_09170;partial=true;start_range=.,1
NZ_PYKF01000301.1	Protein Homology	CDS	1	1120	.	+	1	ID=cds-WP_146712516.1;Parent=gene-C9F04_RS08875;Dbxref=Genbank:WP_146712516.1;Name=WP_146712516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9F04_RS08875;partial=true;product=ATP-grasp domain-containing protein;protein_id=WP_146712516.1;start_range=.,1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	1394	1789	.	+	.	ID=gene-C9F04_RS08880;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9F04_RS08880;old_locus_tag=C9F04_09175
NZ_PYKF01000301.1	Protein Homology	CDS	1394	1789	.	+	0	ID=cds-WP_000333324.1;Parent=gene-C9F04_RS08880;Dbxref=Genbank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9F04_RS08880;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	1867	2463	.	-	.	ID=gene-C9F04_RS08885;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9F04_RS08885;old_locus_tag=C9F04_09180
NZ_PYKF01000301.1	Protein Homology	CDS	1867	2463	.	-	0	ID=cds-WP_000122863.1;Parent=gene-C9F04_RS08885;Dbxref=Genbank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9F04_RS08885;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	2573	3358	.	-	.	ID=gene-C9F04_RS08890;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9F04_RS08890;old_locus_tag=C9F04_09185
NZ_PYKF01000301.1	Protein Homology	CDS	2573	3358	.	-	0	ID=cds-WP_146712517.1;Parent=gene-C9F04_RS08890;Dbxref=Genbank:WP_146712517.1;Name=WP_146712517.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F04_RS08890;product=crotonobetainyl-CoA hydratase;protein_id=WP_146712517.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	3412	4965	.	-	.	ID=gene-C9F04_RS08895;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9F04_RS08895;old_locus_tag=C9F04_09190
NZ_PYKF01000301.1	Protein Homology	CDS	3412	4965	.	-	0	ID=cds-WP_135369438.1;Parent=gene-C9F04_RS08895;Dbxref=Genbank:WP_135369438.1;Name=WP_135369438.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9F04_RS08895;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_135369438.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	5028	6245	.	-	.	ID=gene-C9F04_RS08900;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9F04_RS08900;old_locus_tag=C9F04_09195
NZ_PYKF01000301.1	Protein Homology	CDS	5028	6245	.	-	0	ID=cds-WP_001016212.1;Parent=gene-C9F04_RS08900;Dbxref=Genbank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9F04_RS08900;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	6357	7499	.	-	.	ID=gene-C9F04_RS08905;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9F04_RS08905;old_locus_tag=C9F04_09200
NZ_PYKF01000301.1	Protein Homology	CDS	6357	7499	.	-	0	ID=cds-WP_005124373.1;Parent=gene-C9F04_RS08905;Dbxref=Genbank:WP_005124373.1;Name=WP_005124373.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F04_RS08905;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_005124373.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	gene	7534	9051	.	-	.	ID=gene-C9F04_RS08910;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9F04_RS08910;old_locus_tag=C9F04_09205
NZ_PYKF01000301.1	Protein Homology	CDS	7534	9051	.	-	0	ID=cds-WP_000787073.1;Parent=gene-C9F04_RS08910;Dbxref=Genbank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9F04_RS08910;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11
NZ_PYKF01000301.1	RefSeq	pseudogene	9532	9877	.	+	.	ID=gene-C9F04_RS08915;Name=C9F04_RS08915;end_range=9877,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08915;old_locus_tag=C9F04_09210;partial=true;pseudo=true
NZ_PYKF01000301.1	Protein Homology	CDS	9532	9877	.	+	0	ID=cds-C9F04_RS08915;Parent=gene-C9F04_RS08915;Note=required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9877,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9F04_RS08915;partial=true;product=electron transfer flavoprotein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000573.1 1 9864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000573.1	RefSeq	region	1	9864	.	+	.	ID=NZ_PYKF01000573.1:1..9864;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000573.1	RefSeq	gene	1	1514	.	-	.	ID=gene-C9F04_RS17075;Name=C9F04_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17075;old_locus_tag=C9F04_17625;partial=true;start_range=.,1
NZ_PYKF01000573.1	Protein Homology	CDS	1	1514	.	-	0	ID=cds-WP_222591892.1;Parent=gene-C9F04_RS17075;Dbxref=Genbank:WP_222591892.1;Name=WP_222591892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9F04_RS17075;partial=true;product=DUF823 domain-containing adhesin;protein_id=WP_222591892.1;start_range=.,1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	1634	2599	.	-	.	ID=gene-C9F04_RS17080;Name=C9F04_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17080;old_locus_tag=C9F04_17630
NZ_PYKF01000573.1	Protein Homology	CDS	1634	2599	.	-	0	ID=cds-WP_135369314.1;Parent=gene-C9F04_RS17080;Dbxref=Genbank:WP_135369314.1;Name=WP_135369314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9F04_RS17080;product=SinI family autotransporter-associated protein;protein_id=WP_135369314.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	2657	4849	.	-	.	ID=gene-C9F04_RS17085;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9F04_RS17085;old_locus_tag=C9F04_17635
NZ_PYKF01000573.1	Protein Homology	CDS	2657	4849	.	-	0	ID=cds-WP_146712925.1;Parent=gene-C9F04_RS17085;Dbxref=Genbank:WP_146712925.1;Name=WP_146712925.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F04_RS17085;product=intimin-like inverse autotransporter SinH;protein_id=WP_146712925.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	5195	5416	.	-	.	ID=gene-C9F04_RS17090;Name=C9F04_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17090;old_locus_tag=C9F04_17640
NZ_PYKF01000573.1	Protein Homology	CDS	5195	5416	.	-	0	ID=cds-WP_000406465.1;Parent=gene-C9F04_RS17090;Dbxref=Genbank:WP_000406465.1;Name=WP_000406465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9F04_RS17090;product=zinc ribbon domain-containing protein;protein_id=WP_000406465.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	5505	6977	.	-	.	ID=gene-C9F04_RS17095;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9F04_RS17095;old_locus_tag=C9F04_17645
NZ_PYKF01000573.1	Protein Homology	CDS	5505	6977	.	-	0	ID=cds-WP_050068376.1;Parent=gene-C9F04_RS17095;Dbxref=Genbank:WP_050068376.1;Name=WP_050068376.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9F04_RS17095;product=ribosome biogenesis GTPase Der;protein_id=WP_050068376.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	7094	8272	.	-	.	ID=gene-C9F04_RS17100;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9F04_RS17100;old_locus_tag=C9F04_17650
NZ_PYKF01000573.1	Protein Homology	CDS	7094	8272	.	-	0	ID=cds-WP_135369740.1;Parent=gene-C9F04_RS17100;Dbxref=Genbank:WP_135369740.1;Name=WP_135369740.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9F04_RS17100;product=outer membrane protein assembly factor BamB;protein_id=WP_135369740.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	8283	8903	.	-	.	ID=gene-C9F04_RS17105;Name=C9F04_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17105;old_locus_tag=C9F04_17655
NZ_PYKF01000573.1	Protein Homology	CDS	8283	8903	.	-	0	ID=cds-WP_146712926.1;Parent=gene-C9F04_RS17105;Dbxref=Genbank:WP_146712926.1;Name=WP_146712926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9F04_RS17105;product=YfgM family protein;protein_id=WP_146712926.1;transl_table=11
NZ_PYKF01000573.1	RefSeq	gene	8917	9864	.	-	.	ID=gene-C9F04_RS17110;Name=hisS;end_range=9864,.;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9F04_RS17110;old_locus_tag=C9F04_17660;partial=true
NZ_PYKF01000573.1	Protein Homology	CDS	8917	9864	.	-	0	ID=cds-WP_146712927.1;Parent=gene-C9F04_RS17110;Dbxref=Genbank:WP_146712927.1;Name=WP_146712927.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;end_range=9864,.;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9F04_RS17110;partial=true;product=histidine--tRNA ligase;protein_id=WP_146712927.1;transl_table=11
##sequence-region NZ_PYKF01000246.1 1 9809
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000246.1	RefSeq	region	1	9809	.	+	.	ID=NZ_PYKF01000246.1:1..9809;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000246.1	RefSeq	pseudogene	1	185	.	+	.	ID=gene-C9F04_RS06605;Name=C9F04_RS06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06605;old_locus_tag=C9F04_06820;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000246.1	Protein Homology	CDS	1	185	.	+	2	ID=cds-C9F04_RS06605;Parent=gene-C9F04_RS06605;Note=cytochrome b556(FDO) component%3B heme containing%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9F04_RS06605;partial=true;product=formate dehydrogenase cytochrome b556 subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	182	1111	.	+	.	ID=gene-C9F04_RS06610;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9F04_RS06610;old_locus_tag=C9F04_06825
NZ_PYKF01000246.1	Protein Homology	CDS	182	1111	.	+	0	ID=cds-WP_000027730.1;Parent=gene-C9F04_RS06610;Dbxref=Genbank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F04_RS06610;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	1158	1448	.	-	.	ID=gene-C9F04_RS06615;Name=C9F04_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06615;old_locus_tag=C9F04_06830
NZ_PYKF01000246.1	Protein Homology	CDS	1158	1448	.	-	0	ID=cds-WP_000362050.1;Parent=gene-C9F04_RS06615;Dbxref=Genbank:WP_000362050.1;Name=WP_000362050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=C9F04_RS06615;product=DNA-binding transcriptional regulator;protein_id=WP_000362050.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	1449	1760	.	-	.	ID=gene-C9F04_RS06620;Name=C9F04_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06620;old_locus_tag=C9F04_06835
NZ_PYKF01000246.1	Protein Homology	CDS	1449	1760	.	-	0	ID=cds-WP_001159632.1;Parent=gene-C9F04_RS06620;Dbxref=Genbank:WP_001159632.1;Name=WP_001159632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9F04_RS06620;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159632.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	1978	2907	.	+	.	ID=gene-C9F04_RS06625;Name=C9F04_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06625;old_locus_tag=C9F04_06840
NZ_PYKF01000246.1	Protein Homology	CDS	1978	2907	.	+	0	ID=cds-WP_135369783.1;Parent=gene-C9F04_RS06625;Dbxref=Genbank:WP_135369783.1;Name=WP_135369783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9F04_RS06625;product=alpha/beta hydrolase;protein_id=WP_135369783.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	2993	3304	.	+	.	ID=gene-C9F04_RS06630;Name=C9F04_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06630;old_locus_tag=C9F04_06845
NZ_PYKF01000246.1	Protein Homology	CDS	2993	3304	.	+	0	ID=cds-WP_000558166.1;Parent=gene-C9F04_RS06630;Dbxref=Genbank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9F04_RS06630;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	3301	3747	.	+	.	ID=gene-C9F04_RS06635;Name=C9F04_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06635;old_locus_tag=C9F04_06850
NZ_PYKF01000246.1	Protein Homology	CDS	3301	3747	.	+	0	ID=cds-WP_031609809.1;Parent=gene-C9F04_RS06635;Dbxref=Genbank:WP_031609809.1;Name=WP_031609809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=C9F04_RS06635;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WP_031609809.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	3762	4703	.	-	.	ID=gene-C9F04_RS06640;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9F04_RS06640;old_locus_tag=C9F04_06855
NZ_PYKF01000246.1	Protein Homology	CDS	3762	4703	.	-	0	ID=cds-WP_001518251.1;Parent=gene-C9F04_RS06640;Dbxref=Genbank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9F04_RS06640;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	4748	5185	.	-	.	ID=gene-C9F04_RS06645;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9F04_RS06645;old_locus_tag=C9F04_06860
NZ_PYKF01000246.1	Protein Homology	CDS	4748	5185	.	-	0	ID=cds-WP_000560974.1;Parent=gene-C9F04_RS06645;Dbxref=Genbank:WP_000560974.1;Name=WP_000560974.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9F04_RS06645;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560974.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	5182	6054	.	-	.	ID=gene-C9F04_RS06650;Name=C9F04_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06650;old_locus_tag=C9F04_06865
NZ_PYKF01000246.1	Protein Homology	CDS	5182	6054	.	-	0	ID=cds-WP_000921423.1;Parent=gene-C9F04_RS06650;Dbxref=Genbank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9F04_RS06650;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	6048	6647	.	-	.	ID=gene-C9F04_RS06655;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9F04_RS06655;old_locus_tag=C9F04_06870
NZ_PYKF01000246.1	Protein Homology	CDS	6048	6647	.	-	0	ID=cds-WP_000965698.1;Parent=gene-C9F04_RS06655;Dbxref=Genbank:WP_000965698.1;Name=WP_000965698.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9F04_RS06655;product=glucose-1-phosphatase;protein_id=WP_000965698.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	6838	7641	.	-	.	ID=gene-C9F04_RS06660;Name=C9F04_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06660;old_locus_tag=C9F04_06875
NZ_PYKF01000246.1	Protein Homology	CDS	6838	7641	.	-	0	ID=cds-WP_000059693.1;Parent=gene-C9F04_RS06660;Dbxref=Genbank:WP_000059693.1;Name=WP_000059693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9F04_RS06660;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	7675	8571	.	-	.	ID=gene-C9F04_RS06665;Name=C9F04_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06665;old_locus_tag=C9F04_06880
NZ_PYKF01000246.1	Protein Homology	CDS	7675	8571	.	-	0	ID=cds-WP_001520529.1;Parent=gene-C9F04_RS06665;Dbxref=Genbank:WP_001520529.1;Name=WP_001520529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9F04_RS06665;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	gene	8736	9632	.	+	.	ID=gene-C9F04_RS06670;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9F04_RS06670;old_locus_tag=C9F04_06885
NZ_PYKF01000246.1	Protein Homology	CDS	8736	9632	.	+	0	ID=cds-WP_000268248.1;Parent=gene-C9F04_RS06670;Dbxref=Genbank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9F04_RS06670;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11
NZ_PYKF01000246.1	RefSeq	pseudogene	9655	9809	.	+	.	ID=gene-C9F04_RS06675;Name=C9F04_RS06675;end_range=9809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06675;old_locus_tag=C9F04_06890;partial=true;pseudo=true
NZ_PYKF01000246.1	Protein Homology	CDS	9655	9809	.	+	0	ID=cds-C9F04_RS06675;Parent=gene-C9F04_RS06675;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9F04_RS06675;partial=true;product=aldolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000449.1 1 9772
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000449.1	RefSeq	region	1	9772	.	+	.	ID=NZ_PYKF01000449.1:1..9772;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000449.1	RefSeq	gene	1	738	.	-	.	ID=gene-C9F04_RS13390;Name=C9F04_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13390;old_locus_tag=C9F04_13825;partial=true;start_range=.,1
NZ_PYKF01000449.1	Protein Homology	CDS	1	738	.	-	0	ID=cds-WP_186799029.1;Parent=gene-C9F04_RS13390;Dbxref=Genbank:WP_186799029.1;Name=WP_186799029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F04_RS13390;partial=true;product=type VI secretion system baseplate subunit TssF;protein_id=WP_186799029.1;start_range=.,1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	754	1248	.	-	.	ID=gene-C9F04_RS13395;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9F04_RS13395;old_locus_tag=C9F04_13830
NZ_PYKF01000449.1	Protein Homology	CDS	754	1248	.	-	0	ID=cds-WP_000108007.1;Parent=gene-C9F04_RS13395;Dbxref=Genbank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9F04_RS13395;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	1245	2069	.	-	.	ID=gene-C9F04_RS13400;Name=C9F04_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13400;old_locus_tag=C9F04_13835
NZ_PYKF01000449.1	Protein Homology	CDS	1245	2069	.	-	0	ID=cds-WP_146712749.1;Parent=gene-C9F04_RS13400;Dbxref=Genbank:WP_146712749.1;Name=WP_146712749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9F04_RS13400;product=impE family protein;protein_id=WP_146712749.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	2056	2958	.	-	.	ID=gene-C9F04_RS13405;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9F04_RS13405;old_locus_tag=C9F04_13840
NZ_PYKF01000449.1	Protein Homology	CDS	2056	2958	.	-	0	ID=cds-WP_000806681.1;Parent=gene-C9F04_RS13405;Dbxref=Genbank:WP_000806681.1;Name=WP_000806681.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9F04_RS13405;product=type VI secretion system-associated protein TagK;protein_id=WP_000806681.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	3326	5965	.	+	.	ID=gene-C9F04_RS13410;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=C9F04_RS13410;old_locus_tag=C9F04_13845
NZ_PYKF01000449.1	Protein Homology	CDS	3326	5965	.	+	0	ID=cds-WP_000449779.1;Parent=gene-C9F04_RS13410;Dbxref=Genbank:WP_000449779.1;Name=WP_000449779.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9F04_RS13410;product=type VI secretion system ATPase TssH;protein_id=WP_000449779.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	6065	6607	.	+	.	ID=gene-C9F04_RS13415;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9F04_RS13415;old_locus_tag=C9F04_13850
NZ_PYKF01000449.1	Protein Homology	CDS	6065	6607	.	+	0	ID=cds-WP_000996815.1;Parent=gene-C9F04_RS13415;Dbxref=Genbank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9F04_RS13415;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	6631	8139	.	+	.	ID=gene-C9F04_RS13420;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9F04_RS13420;old_locus_tag=C9F04_13855
NZ_PYKF01000449.1	Protein Homology	CDS	6631	8139	.	+	0	ID=cds-WP_146712750.1;Parent=gene-C9F04_RS13420;Dbxref=Genbank:WP_146712750.1;Name=WP_146712750.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9F04_RS13420;product=type VI secretion system contractile sheath large subunit;protein_id=WP_146712750.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	8441	8773	.	+	.	ID=gene-C9F04_RS13430;Name=C9F04_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13430;old_locus_tag=C9F04_13865
NZ_PYKF01000449.1	Protein Homology	CDS	8441	8773	.	+	0	ID=cds-WP_077909447.1;Parent=gene-C9F04_RS13430;Dbxref=Genbank:WP_077909447.1;Name=WP_077909447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459273.3;locus_tag=C9F04_RS13430;product=hypothetical protein;protein_id=WP_077909447.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	9027	9512	.	+	.	ID=gene-C9F04_RS13435;Name=C9F04_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13435;old_locus_tag=C9F04_13870
NZ_PYKF01000449.1	Protein Homology	CDS	9027	9512	.	+	0	ID=cds-WP_000312802.1;Parent=gene-C9F04_RS13435;Dbxref=Genbank:WP_000312802.1;Name=WP_000312802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9F04_RS13435;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11
NZ_PYKF01000449.1	RefSeq	gene	9579	9772	.	+	.	ID=gene-C9F04_RS13440;Name=tssJ;end_range=9772,.;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9F04_RS13440;old_locus_tag=C9F04_13875;partial=true
NZ_PYKF01000449.1	Protein Homology	CDS	9579	9772	.	+	0	ID=cds-WP_146712751.1;Parent=gene-C9F04_RS13440;Dbxref=Genbank:WP_146712751.1;Name=WP_146712751.1;Ontology_term=GO:0033103,GO:0003674;end_range=9772,.;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9F04_RS13440;partial=true;product=type VI secretion system lipoprotein TssJ;protein_id=WP_146712751.1;transl_table=11
##sequence-region NZ_PYKF01000813.1 1 9727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000813.1	RefSeq	region	1	9727	.	+	.	ID=NZ_PYKF01000813.1:1..9727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000813.1	RefSeq	gene	1	215	.	+	.	ID=gene-C9F04_RS26825;Name=C9F04_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26825;partial=true;start_range=.,1
NZ_PYKF01000813.1	GeneMarkS-2+	CDS	1	215	.	+	2	ID=cds-WP_222591897.1;Parent=gene-C9F04_RS26825;Dbxref=Genbank:WP_222591897.1;Name=WP_222591897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26825;partial=true;product=hypothetical protein;protein_id=WP_222591897.1;start_range=.,1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	302	1114	.	-	.	ID=gene-C9F04_RS25525;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9F04_RS25525;old_locus_tag=C9F04_26400
NZ_PYKF01000813.1	Protein Homology	CDS	302	1114	.	-	0	ID=cds-WP_000985571.1;Parent=gene-C9F04_RS25525;Dbxref=Genbank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=C9F04_RS25525;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	1554	2246	.	+	.	ID=gene-C9F04_RS25530;Name=C9F04_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25530;old_locus_tag=C9F04_26405
NZ_PYKF01000813.1	Protein Homology	CDS	1554	2246	.	+	0	ID=cds-WP_080220794.1;Parent=gene-C9F04_RS25530;Dbxref=Genbank:WP_080220794.1;Name=WP_080220794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=C9F04_RS25530;product=hypothetical protein;protein_id=WP_080220794.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	2597	5011	.	-	.	ID=gene-C9F04_RS25535;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9F04_RS25535;old_locus_tag=C9F04_26410
NZ_PYKF01000813.1	Protein Homology	CDS	2597	5011	.	-	0	ID=cds-WP_146713353.1;Parent=gene-C9F04_RS25535;Dbxref=Genbank:WP_146713353.1;Name=WP_146713353.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9F04_RS25535;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_146713353.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	5040	6113	.	-	.	ID=gene-C9F04_RS25540;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9F04_RS25540;old_locus_tag=C9F04_26415
NZ_PYKF01000813.1	Protein Homology	CDS	5040	6113	.	-	0	ID=cds-WP_000060081.1;Parent=gene-C9F04_RS25540;Dbxref=Genbank:WP_000060081.1;Name=WP_000060081.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9F04_RS25540;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	6261	7361	.	-	.	ID=gene-C9F04_RS25545;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9F04_RS25545;old_locus_tag=C9F04_26420
NZ_PYKF01000813.1	Protein Homology	CDS	6261	7361	.	-	0	ID=cds-WP_146713354.1;Parent=gene-C9F04_RS25545;Dbxref=Genbank:WP_146713354.1;Name=WP_146713354.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F04_RS25545;product=DNA polymerase III subunit beta;protein_id=WP_146713354.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	7366	8766	.	-	.	ID=gene-C9F04_RS25550;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9F04_RS25550;old_locus_tag=C9F04_26425
NZ_PYKF01000813.1	Protein Homology	CDS	7366	8766	.	-	0	ID=cds-WP_000059093.1;Parent=gene-C9F04_RS25550;Dbxref=Genbank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9F04_RS25550;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	9427	9567	.	+	.	ID=gene-C9F04_RS25555;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9F04_RS25555;old_locus_tag=C9F04_26430
NZ_PYKF01000813.1	Protein Homology	CDS	9427	9567	.	+	0	ID=cds-WP_146713355.1;Parent=gene-C9F04_RS25555;Dbxref=Genbank:WP_146713355.1;Name=WP_146713355.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9F04_RS25555;product=50S ribosomal protein L34;protein_id=WP_146713355.1;transl_table=11
NZ_PYKF01000813.1	RefSeq	gene	9584	9727	.	+	.	ID=gene-C9F04_RS25560;Name=C9F04_RS25560;end_range=9727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25560;old_locus_tag=C9F04_26435;partial=true
NZ_PYKF01000813.1	Protein Homology	CDS	9584	9727	.	+	0	ID=cds-WP_186799102.1;Parent=gene-C9F04_RS25560;Dbxref=Genbank:WP_186799102.1;Name=WP_186799102.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;end_range=9727,.;gbkey=CDS;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9F04_RS25560;partial=true;product=ribonuclease P protein component;protein_id=WP_186799102.1;transl_table=11
##sequence-region NZ_PYKF01000265.1 1 9695
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000265.1	RefSeq	region	1	9695	.	+	.	ID=NZ_PYKF01000265.1:1..9695;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000265.1	RefSeq	gene	111	1355	.	-	.	ID=gene-C9F04_RS07360;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9F04_RS07360;old_locus_tag=C9F04_07605
NZ_PYKF01000265.1	Protein Homology	CDS	111	1355	.	-	0	ID=cds-WP_000224372.1;Parent=gene-C9F04_RS07360;Dbxref=Genbank:WP_000224372.1;Name=WP_000224372.1;Ontology_term=GO:0015801,GO:0015173,GO:0005887;gbkey=CDS;gene=mtr;go_component=integral component of plasma membrane|0005887||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9F04_RS07360;product=tryptophan permease;protein_id=WP_000224372.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	1509	3398	.	-	.	ID=gene-C9F04_RS07365;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9F04_RS07365;old_locus_tag=C9F04_07610
NZ_PYKF01000265.1	Protein Homology	CDS	1509	3398	.	-	0	ID=cds-WP_000807248.1;Parent=gene-C9F04_RS07365;Dbxref=Genbank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9F04_RS07365;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	3391	3471	.	-	.	ID=gene-C9F04_RS07370;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9F04_RS07370
NZ_PYKF01000265.1	Protein Homology	CDS	3391	3471	.	-	0	ID=cds-WP_010723222.1;Parent=gene-C9F04_RS07370;Dbxref=Genbank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9F04_RS07370;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	3577	4461	.	-	.	ID=gene-C9F04_RS07375;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9F04_RS07375;old_locus_tag=C9F04_07615
NZ_PYKF01000265.1	Protein Homology	CDS	3577	4461	.	-	0	ID=cds-WP_000802069.1;Parent=gene-C9F04_RS07375;Dbxref=Genbank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9F04_RS07375;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	4571	6706	.	-	.	ID=gene-C9F04_RS07380;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9F04_RS07380;old_locus_tag=C9F04_07620
NZ_PYKF01000265.1	Protein Homology	CDS	4571	6706	.	-	0	ID=cds-WP_146712469.1;Parent=gene-C9F04_RS07380;Dbxref=Genbank:WP_146712469.1;Name=WP_146712469.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9F04_RS07380;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_146712469.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	6948	7217	.	-	.	ID=gene-C9F04_RS07385;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9F04_RS07385;old_locus_tag=C9F04_07625
NZ_PYKF01000265.1	Protein Homology	CDS	6948	7217	.	-	0	ID=cds-WP_000059465.1;Parent=gene-C9F04_RS07385;Dbxref=Genbank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9F04_RS07385;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	7368	8312	.	-	.	ID=gene-C9F04_RS07390;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9F04_RS07390;old_locus_tag=C9F04_07630
NZ_PYKF01000265.1	Protein Homology	CDS	7368	8312	.	-	0	ID=cds-WP_135369572.1;Parent=gene-C9F04_RS07390;Dbxref=Genbank:WP_135369572.1;Name=WP_135369572.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9F04_RS07390;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_135369572.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	8312	8713	.	-	.	ID=gene-C9F04_RS07395;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9F04_RS07395;old_locus_tag=C9F04_07635
NZ_PYKF01000265.1	Protein Homology	CDS	8312	8713	.	-	0	ID=cds-WP_001040208.1;Parent=gene-C9F04_RS07395;Dbxref=Genbank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9F04_RS07395;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11
NZ_PYKF01000265.1	RefSeq	gene	8934	9695	.	-	.	ID=gene-C9F04_RS07400;Name=C9F04_RS07400;end_range=9695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07400;old_locus_tag=C9F04_07640;partial=true
NZ_PYKF01000265.1	Protein Homology	CDS	8934	9695	.	-	0	ID=cds-WP_261770757.1;Parent=gene-C9F04_RS07400;Dbxref=Genbank:WP_261770757.1;Name=WP_261770757.1;Ontology_term=GO:0005525;end_range=9695,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F04_RS07400;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_261770757.1;transl_table=11
##sequence-region NZ_PYKF01000812.1 1 9668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000812.1	RefSeq	region	1	9668	.	+	.	ID=NZ_PYKF01000812.1:1..9668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000812.1	RefSeq	pseudogene	28	1182	.	+	.	ID=gene-C9F04_RS25460;Name=C9F04_RS25460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25460;old_locus_tag=C9F04_26335;partial=true;pseudo=true;start_range=.,28
NZ_PYKF01000812.1	Protein Homology	CDS	28	1182	.	+	0	ID=cds-C9F04_RS25460;Parent=gene-C9F04_RS25460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9F04_RS25460;partial=true;product=PRD domain-containing protein;pseudo=true;start_range=.,28;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	1310	2296	.	-	.	ID=gene-C9F04_RS25465;Name=C9F04_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25465;old_locus_tag=C9F04_26340
NZ_PYKF01000812.1	Protein Homology	CDS	1310	2296	.	-	0	ID=cds-WP_000109360.1;Parent=gene-C9F04_RS25465;Dbxref=Genbank:WP_000109360.1;Name=WP_000109360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=C9F04_RS25465;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	2363	3406	.	-	.	ID=gene-C9F04_RS25470;Name=C9F04_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25470;old_locus_tag=C9F04_26345
NZ_PYKF01000812.1	Protein Homology	CDS	2363	3406	.	-	0	ID=cds-WP_023139453.1;Parent=gene-C9F04_RS25470;Dbxref=Genbank:WP_023139453.1;Name=WP_023139453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9F04_RS25470;product=SIS domain-containing protein;protein_id=WP_023139453.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	3439	4293	.	-	.	ID=gene-C9F04_RS25475;Name=C9F04_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25475;old_locus_tag=C9F04_26350
NZ_PYKF01000812.1	Protein Homology	CDS	3439	4293	.	-	0	ID=cds-WP_023233555.1;Parent=gene-C9F04_RS25475;Dbxref=Genbank:WP_023233555.1;Name=WP_023233555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=C9F04_RS25475;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_023233555.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	4296	5039	.	-	.	ID=gene-C9F04_RS25480;Name=C9F04_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25480;old_locus_tag=C9F04_26355
NZ_PYKF01000812.1	Protein Homology	CDS	4296	5039	.	-	0	ID=cds-WP_000927522.1;Parent=gene-C9F04_RS25480;Dbxref=Genbank:WP_000927522.1;Name=WP_000927522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=C9F04_RS25480;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927522.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	5054	5524	.	-	.	ID=gene-C9F04_RS25485;Name=C9F04_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25485;old_locus_tag=C9F04_26360
NZ_PYKF01000812.1	Protein Homology	CDS	5054	5524	.	-	0	ID=cds-WP_000594177.1;Parent=gene-C9F04_RS25485;Dbxref=Genbank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=C9F04_RS25485;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	5502	5951	.	-	.	ID=gene-C9F04_RS25490;Name=C9F04_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25490;old_locus_tag=C9F04_26365
NZ_PYKF01000812.1	Protein Homology	CDS	5502	5951	.	-	0	ID=cds-WP_146713351.1;Parent=gene-C9F04_RS25490;Dbxref=Genbank:WP_146713351.1;Name=WP_146713351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=C9F04_RS25490;product=PTS sugar transporter subunit IIA;protein_id=WP_146713351.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	6151	6804	.	-	.	ID=gene-C9F04_RS25495;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9F04_RS25495;old_locus_tag=C9F04_26370
NZ_PYKF01000812.1	Protein Homology	CDS	6151	6804	.	-	0	ID=cds-WP_146713352.1;Parent=gene-C9F04_RS25495;Dbxref=Genbank:WP_146713352.1;Name=WP_146713352.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9F04_RS25495;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_146713352.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	6901	7269	.	-	.	ID=gene-C9F04_RS25500;Name=C9F04_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25500;old_locus_tag=C9F04_26375
NZ_PYKF01000812.1	Protein Homology	CDS	6901	7269	.	-	0	ID=cds-WP_000348999.1;Parent=gene-C9F04_RS25500;Dbxref=Genbank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9F04_RS25500;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	7269	7850	.	-	.	ID=gene-C9F04_RS25505;Name=C9F04_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25505;old_locus_tag=C9F04_26380
NZ_PYKF01000812.1	Protein Homology	CDS	7269	7850	.	-	0	ID=cds-WP_000113609.1;Parent=gene-C9F04_RS25505;Dbxref=Genbank:WP_000113609.1;Name=WP_000113609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9F04_RS25505;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	8139	8480	.	+	.	ID=gene-C9F04_RS25510;Name=C9F04_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25510;old_locus_tag=C9F04_26385
NZ_PYKF01000812.1	Protein Homology	CDS	8139	8480	.	+	0	ID=cds-WP_000155633.1;Parent=gene-C9F04_RS25510;Dbxref=Genbank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9F04_RS25510;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	8486	8734	.	-	.	ID=gene-C9F04_RS25515;Name=C9F04_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25515;old_locus_tag=C9F04_26390
NZ_PYKF01000812.1	Protein Homology	CDS	8486	8734	.	-	0	ID=cds-WP_000682497.1;Parent=gene-C9F04_RS25515;Dbxref=Genbank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9F04_RS25515;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11
NZ_PYKF01000812.1	RefSeq	gene	8801	9668	.	-	.	ID=gene-C9F04_RS25520;Name=C9F04_RS25520;end_range=9668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25520;old_locus_tag=C9F04_26395;partial=true
NZ_PYKF01000812.1	Protein Homology	CDS	8801	9668	.	-	1	ID=cds-WP_261771508.1;Parent=gene-C9F04_RS25520;Dbxref=Genbank:WP_261771508.1;Name=WP_261771508.1;Ontology_term=GO:0016881;end_range=9668,.;gbkey=CDS;go_function=acid-amino acid ligase activity|0016881||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9F04_RS25520;partial=true;product=YbdK family carboxylate-amine ligase;protein_id=WP_261771508.1;transl_table=11
##sequence-region NZ_PYKF01000121.1 1 9622
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000121.1	RefSeq	region	1	9622	.	+	.	ID=NZ_PYKF01000121.1:1..9622;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000121.1	RefSeq	pseudogene	1	230	.	-	.	ID=gene-C9F04_RS02295;Name=C9F04_RS02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02295;old_locus_tag=C9F04_02375;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000121.1	Protein Homology	CDS	1	230	.	-	0	ID=cds-C9F04_RS02295;Parent=gene-C9F04_RS02295;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=C9F04_RS02295;partial=true;product=superoxide dismutase [Fe];pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	357	1178	.	-	.	ID=gene-C9F04_RS02300;Name=C9F04_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02300;old_locus_tag=C9F04_02380
NZ_PYKF01000121.1	Protein Homology	CDS	357	1178	.	-	0	ID=cds-WP_206188112.1;Parent=gene-C9F04_RS02300;Dbxref=Genbank:WP_206188112.1;Name=WP_206188112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9F04_RS02300;product=C40 family peptidase;protein_id=WP_206188112.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	1513	1860	.	+	.	ID=gene-C9F04_RS02305;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9F04_RS02305;old_locus_tag=C9F04_02385
NZ_PYKF01000121.1	Protein Homology	CDS	1513	1860	.	+	0	ID=cds-WP_000108176.1;Parent=gene-C9F04_RS02305;Dbxref=Genbank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9F04_RS02305;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	1938	2585	.	-	.	ID=gene-C9F04_RS02315;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9F04_RS02315;old_locus_tag=C9F04_02395
NZ_PYKF01000121.1	Protein Homology	CDS	1938	2585	.	-	0	ID=cds-WP_001282267.1;Parent=gene-C9F04_RS02315;Dbxref=Genbank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9F04_RS02315;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	2686	3093	.	-	.	ID=gene-C9F04_RS02320;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9F04_RS02320;old_locus_tag=C9F04_02400
NZ_PYKF01000121.1	Protein Homology	CDS	2686	3093	.	-	0	ID=cds-WP_001237787.1;Parent=gene-C9F04_RS02320;Dbxref=Genbank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9F04_RS02320;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	3162	4259	.	-	.	ID=gene-C9F04_RS02325;Name=C9F04_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02325;old_locus_tag=C9F04_02405
NZ_PYKF01000121.1	Protein Homology	CDS	3162	4259	.	-	0	ID=cds-WP_135369644.1;Parent=gene-C9F04_RS02325;Dbxref=Genbank:WP_135369644.1;Name=WP_135369644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9F04_RS02325;product=alkene reductase;protein_id=WP_135369644.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	4318	4917	.	-	.	ID=gene-C9F04_RS02330;Name=C9F04_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02330;old_locus_tag=C9F04_02410
NZ_PYKF01000121.1	Protein Homology	CDS	4318	4917	.	-	0	ID=cds-WP_001660120.1;Parent=gene-C9F04_RS02330;Dbxref=Genbank:WP_001660120.1;Name=WP_001660120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9F04_RS02330;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001660120.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	5020	5259	.	+	.	ID=gene-C9F04_RS02335;Name=C9F04_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02335;old_locus_tag=C9F04_02415
NZ_PYKF01000121.1	Protein Homology	CDS	5020	5259	.	+	0	ID=cds-WP_001538148.1;Parent=gene-C9F04_RS02335;Dbxref=Genbank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9F04_RS02335;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	pseudogene	5310	6206	.	+	.	ID=gene-C9F04_RS02340;Name=C9F04_RS02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02340;old_locus_tag=C9F04_02420;pseudo=true
NZ_PYKF01000121.1	Protein Homology	CDS	5310	6206	.	+	0	ID=cds-C9F04_RS02340;Parent=gene-C9F04_RS02340;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9F04_RS02340;product=aldo/keto reductase family oxidoreductase;pseudo=true;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	6286	6807	.	+	.	ID=gene-C9F04_RS02345;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9F04_RS02345;old_locus_tag=C9F04_02425
NZ_PYKF01000121.1	Protein Homology	CDS	6286	6807	.	+	0	ID=cds-WP_000826820.1;Parent=gene-C9F04_RS02345;Dbxref=Genbank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9F04_RS02345;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	gene	6783	8822	.	-	.	ID=gene-C9F04_RS02350;Name=C9F04_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02350;old_locus_tag=C9F04_02430
NZ_PYKF01000121.1	Protein Homology	CDS	6783	8822	.	-	0	ID=cds-WP_000777625.1;Parent=gene-C9F04_RS02350;Dbxref=Genbank:WP_000777625.1;Name=WP_000777625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9F04_RS02350;product=FUSC family protein;protein_id=WP_000777625.1;transl_table=11
NZ_PYKF01000121.1	RefSeq	pseudogene	8822	9601	.	-	.	ID=gene-C9F04_RS02355;Name=C9F04_RS02355;end_range=9601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02355;old_locus_tag=C9F04_02435;partial=true;pseudo=true
NZ_PYKF01000121.1	Protein Homology	CDS	8822	9601	.	-	0	ID=cds-C9F04_RS02355;Parent=gene-C9F04_RS02355;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9F04_RS02355;partial=true;product=HlyD family secretion protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000605.1 1 9615
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000605.1	RefSeq	region	1	9615	.	+	.	ID=NZ_PYKF01000605.1:1..9615;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000605.1	RefSeq	pseudogene	1	141	.	-	.	ID=gene-C9F04_RS27160;Name=C9F04_RS27160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27160;old_locus_tag=C9F04_18715;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000605.1	Protein Homology	CDS	1	141	.	-	0	ID=cds-C9F04_RS27160;Parent=gene-C9F04_RS27160;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055619.1;locus_tag=C9F04_RS27160;partial=true;product=efflux transporter periplasmic adaptor subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	144	380	.	-	.	ID=gene-C9F04_RS18135;Name=C9F04_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18135;old_locus_tag=C9F04_18720
NZ_PYKF01000605.1	Protein Homology	CDS	144	380	.	-	0	ID=cds-WP_000649755.1;Parent=gene-C9F04_RS18135;Dbxref=Genbank:WP_000649755.1;Name=WP_000649755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9F04_RS18135;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	575	1015	.	+	.	ID=gene-C9F04_RS18140;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9F04_RS18140;old_locus_tag=C9F04_18725
NZ_PYKF01000605.1	Protein Homology	CDS	575	1015	.	+	0	ID=cds-WP_000764551.1;Parent=gene-C9F04_RS18140;Dbxref=Genbank:WP_000764551.1;Name=WP_000764551.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9F04_RS18140;product=transcriptional regulator SlyA;protein_id=WP_000764551.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	1063	1530	.	-	.	ID=gene-C9F04_RS18145;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9F04_RS18145;old_locus_tag=C9F04_18730
NZ_PYKF01000605.1	Protein Homology	CDS	1063	1530	.	-	0	ID=cds-WP_000597179.1;Parent=gene-C9F04_RS18145;Dbxref=Genbank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9F04_RS18145;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	1803	2924	.	+	.	ID=gene-C9F04_RS18150;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9F04_RS18150;old_locus_tag=C9F04_18735
NZ_PYKF01000605.1	Protein Homology	CDS	1803	2924	.	+	0	ID=cds-WP_000835021.1;Parent=gene-C9F04_RS18150;Dbxref=Genbank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9F04_RS18150;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	3012	3341	.	+	.	ID=gene-C9F04_RS18155;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9F04_RS18155;old_locus_tag=C9F04_18740
NZ_PYKF01000605.1	Protein Homology	CDS	3012	3341	.	+	0	ID=cds-WP_001132086.1;Parent=gene-C9F04_RS18155;Dbxref=Genbank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9F04_RS18155;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	3400	4056	.	+	.	ID=gene-C9F04_RS18160;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9F04_RS18160;old_locus_tag=C9F04_18745
NZ_PYKF01000605.1	Protein Homology	CDS	3400	4056	.	+	0	ID=cds-WP_001282334.1;Parent=gene-C9F04_RS18160;Dbxref=Genbank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9F04_RS18160;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	4183	5457	.	+	.	ID=gene-C9F04_RS18165;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9F04_RS18165;old_locus_tag=C9F04_18750
NZ_PYKF01000605.1	Protein Homology	CDS	4183	5457	.	+	0	ID=cds-WP_000168626.1;Parent=gene-C9F04_RS18165;Dbxref=Genbank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9F04_RS18165;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	5517	6377	.	+	.	ID=gene-C9F04_RS18170;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9F04_RS18170;old_locus_tag=C9F04_18755
NZ_PYKF01000605.1	Protein Homology	CDS	5517	6377	.	+	0	ID=cds-WP_000789736.1;Parent=gene-C9F04_RS18170;Dbxref=Genbank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9F04_RS18170;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	6436	7041	.	-	.	ID=gene-C9F04_RS18175;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9F04_RS18175;old_locus_tag=C9F04_18760
NZ_PYKF01000605.1	Protein Homology	CDS	6436	7041	.	-	0	ID=cds-WP_000765727.1;Parent=gene-C9F04_RS18175;Dbxref=Genbank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9F04_RS18175;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	gene	7146	8651	.	-	.	ID=gene-C9F04_RS18180;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9F04_RS18180;old_locus_tag=C9F04_18765
NZ_PYKF01000605.1	Protein Homology	CDS	7146	8651	.	-	0	ID=cds-WP_000100911.1;Parent=gene-C9F04_RS18180;Dbxref=Genbank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9F04_RS18180;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11
NZ_PYKF01000605.1	RefSeq	pseudogene	9253	9519	.	-	.	ID=gene-C9F04_RS18185;Name=C9F04_RS18185;end_range=9519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18185;old_locus_tag=C9F04_18770;partial=true;pseudo=true
NZ_PYKF01000605.1	Protein Homology	CDS	9253	9519	.	-	0	ID=cds-C9F04_RS18185;Parent=gene-C9F04_RS18185;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F04_RS18185;partial=true;product=endonuclease III;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000036.1 1 9589
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000036.1	RefSeq	region	1	9589	.	+	.	ID=NZ_PYKF01000036.1:1..9589;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000036.1	RefSeq	gene	1	1149	.	-	.	ID=gene-C9F04_RS00530;Name=C9F04_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00530;old_locus_tag=C9F04_00560;partial=true;start_range=.,1
NZ_PYKF01000036.1	Protein Homology	CDS	1	1149	.	-	0	ID=cds-WP_146712152.1;Parent=gene-C9F04_RS00530;Dbxref=Genbank:WP_146712152.1;Name=WP_146712152.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9F04_RS00530;partial=true;product=PAS domain-containing protein;protein_id=WP_146712152.1;start_range=.,1;transl_table=11
NZ_PYKF01000036.1	RefSeq	gene	1243	2172	.	-	.	ID=gene-C9F04_RS00535;Name=C9F04_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00535;old_locus_tag=C9F04_00565
NZ_PYKF01000036.1	Protein Homology	CDS	1243	2172	.	-	0	ID=cds-WP_146712153.1;Parent=gene-C9F04_RS00535;Dbxref=Genbank:WP_146712153.1;Name=WP_146712153.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9F04_RS00535;product=TIGR01212 family radical SAM protein;protein_id=WP_146712153.1;transl_table=11
NZ_PYKF01000036.1	RefSeq	gene	2844	7304	.	+	.	ID=gene-C9F04_RS00540;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9F04_RS00540;old_locus_tag=C9F04_00575
NZ_PYKF01000036.1	Protein Homology	CDS	2844	7304	.	+	0	ID=cds-WP_146712154.1;Parent=gene-C9F04_RS00540;Dbxref=Genbank:WP_146712154.1;Name=WP_146712154.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F04_RS00540;product=glutamate synthase large subunit;protein_id=WP_146712154.1;transl_table=11
NZ_PYKF01000036.1	RefSeq	gene	7314	8732	.	+	.	ID=gene-C9F04_RS00545;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9F04_RS00545;old_locus_tag=C9F04_00580
NZ_PYKF01000036.1	Protein Homology	CDS	7314	8732	.	+	0	ID=cds-WP_000081642.1;Parent=gene-C9F04_RS00545;Dbxref=Genbank:WP_000081642.1;Name=WP_000081642.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F04_RS00545;product=glutamate synthase subunit GltD;protein_id=WP_000081642.1;transl_table=11
NZ_PYKF01000036.1	RefSeq	gene	8939	9589	.	+	.	ID=gene-C9F04_RS00550;Name=C9F04_RS00550;end_range=9589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00550;old_locus_tag=C9F04_00585;partial=true
NZ_PYKF01000036.1	Protein Homology	CDS	8939	9589	.	+	0	ID=cds-WP_261770724.1;Parent=gene-C9F04_RS00550;Dbxref=Genbank:WP_261770724.1;Name=WP_261770724.1;end_range=9589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184308.1;locus_tag=C9F04_RS00550;partial=true;product=DUF1016 N-terminal domain-containing protein;protein_id=WP_261770724.1;transl_table=11
##sequence-region NZ_PYKF01000276.1 1 23057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000276.1	RefSeq	region	1	23057	.	+	.	ID=NZ_PYKF01000276.1:1..23057;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000276.1	RefSeq	gene	169	453	.	+	.	ID=gene-C9F04_RS07590;Name=C9F04_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07590;old_locus_tag=C9F04_07835
NZ_PYKF01000276.1	Protein Homology	CDS	169	453	.	+	0	ID=cds-WP_261770760.1;Parent=gene-C9F04_RS07590;Dbxref=Genbank:WP_261770760.1;Name=WP_261770760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039496.1;locus_tag=C9F04_RS07590;product=DUF5655 domain-containing protein;protein_id=WP_261770760.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	530	694	.	-	.	ID=gene-C9F04_RS07595;Name=C9F04_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07595;old_locus_tag=C9F04_07840
NZ_PYKF01000276.1	Protein Homology	CDS	530	694	.	-	0	ID=cds-WP_135369730.1;Parent=gene-C9F04_RS07595;Dbxref=Genbank:WP_135369730.1;Name=WP_135369730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9F04_RS07595;product=DUF1127 domain-containing protein;protein_id=WP_135369730.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	661	804	.	+	.	ID=gene-C9F04_RS07600;Name=C9F04_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07600;old_locus_tag=C9F04_07845
NZ_PYKF01000276.1	Protein Homology	CDS	661	804	.	+	0	ID=cds-WP_001541460.1;Parent=gene-C9F04_RS07600;Dbxref=Genbank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9F04_RS07600;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	900	2270	.	-	.	ID=gene-C9F04_RS07605;Name=C9F04_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07605;old_locus_tag=C9F04_07850
NZ_PYKF01000276.1	Protein Homology	CDS	900	2270	.	-	0	ID=cds-WP_135369731.1;Parent=gene-C9F04_RS07605;Dbxref=Genbank:WP_135369731.1;Name=WP_135369731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331412.1;locus_tag=C9F04_RS07605;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135369731.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	2451	3404	.	-	.	ID=gene-C9F04_RS07610;Name=C9F04_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07610;old_locus_tag=C9F04_07855
NZ_PYKF01000276.1	Protein Homology	CDS	2451	3404	.	-	0	ID=cds-WP_146712480.1;Parent=gene-C9F04_RS07610;Dbxref=Genbank:WP_146712480.1;Name=WP_146712480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9F04_RS07610;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_146712480.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	3883	5124	.	+	.	ID=gene-C9F04_RS07615;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9F04_RS07615;old_locus_tag=C9F04_07860
NZ_PYKF01000276.1	Protein Homology	CDS	3883	5124	.	+	0	ID=cds-WP_080185044.1;Parent=gene-C9F04_RS07615;Dbxref=Genbank:WP_080185044.1;Name=WP_080185044.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mdtM;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9F04_RS07615;product=multidrug efflux MFS transporter MdtM;protein_id=WP_080185044.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	5211	6482	.	+	.	ID=gene-C9F04_RS07620;Name=C9F04_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07620;old_locus_tag=C9F04_07865
NZ_PYKF01000276.1	Protein Homology	CDS	5211	6482	.	+	0	ID=cds-WP_001033033.1;Parent=gene-C9F04_RS07620;Dbxref=Genbank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9F04_RS07620;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	6702	7886	.	+	.	ID=gene-C9F04_RS07625;Name=C9F04_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07625;old_locus_tag=C9F04_07870
NZ_PYKF01000276.1	Protein Homology	CDS	6702	7886	.	+	0	ID=cds-WP_135369732.1;Parent=gene-C9F04_RS07625;Dbxref=Genbank:WP_135369732.1;Name=WP_135369732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9F04_RS07625;product=MFS transporter;protein_id=WP_135369732.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	8758	9429	.	+	.	ID=gene-C9F04_RS07635;Name=C9F04_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07635;old_locus_tag=C9F04_07875
NZ_PYKF01000276.1	Protein Homology	CDS	8758	9429	.	+	0	ID=cds-WP_146712481.1;Parent=gene-C9F04_RS07635;Dbxref=Genbank:WP_146712481.1;Name=WP_146712481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=C9F04_RS07635;product=hypothetical protein;protein_id=WP_146712481.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	9426	9887	.	+	.	ID=gene-C9F04_RS07640;Name=C9F04_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07640;old_locus_tag=C9F04_07880
NZ_PYKF01000276.1	Protein Homology	CDS	9426	9887	.	+	0	ID=cds-WP_000211979.1;Parent=gene-C9F04_RS07640;Dbxref=Genbank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9F04_RS07640;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	9900	11072	.	+	.	ID=gene-C9F04_RS07645;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9F04_RS07645;old_locus_tag=C9F04_07885
NZ_PYKF01000276.1	Protein Homology	CDS	9900	11072	.	+	0	ID=cds-WP_146712482.1;Parent=gene-C9F04_RS07645;Dbxref=Genbank:WP_146712482.1;Name=WP_146712482.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9F04_RS07645;product=beta-aspartyl-peptidase;protein_id=WP_146712482.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	11191	12099	.	+	.	ID=gene-C9F04_RS07650;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9F04_RS07650;old_locus_tag=C9F04_07890
NZ_PYKF01000276.1	Protein Homology	CDS	11191	12099	.	+	0	ID=cds-WP_000383509.1;Parent=gene-C9F04_RS07650;Dbxref=Genbank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9F04_RS07650;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	12105	12839	.	-	.	ID=gene-C9F04_RS07655;Name=C9F04_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07655;old_locus_tag=C9F04_07895
NZ_PYKF01000276.1	Protein Homology	CDS	12105	12839	.	-	0	ID=cds-WP_000683251.1;Parent=gene-C9F04_RS07655;Dbxref=Genbank:WP_000683251.1;Name=WP_000683251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9F04_RS07655;product=aspartate/glutamate racemase family protein;protein_id=WP_000683251.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	13078	13608	.	-	.	ID=gene-C9F04_RS07660;Name=C9F04_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07660;old_locus_tag=C9F04_07905
NZ_PYKF01000276.1	Protein Homology	CDS	13078	13608	.	-	0	ID=cds-WP_000907671.1;Parent=gene-C9F04_RS07660;Dbxref=Genbank:WP_000907671.1;Name=WP_000907671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9F04_RS07660;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	14326	15339	.	+	.	ID=gene-C9F04_RS07665;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F04_RS07665;old_locus_tag=C9F04_07910
NZ_PYKF01000276.1	Protein Homology	CDS	14326	15339	.	+	0	ID=cds-WP_135369137.1;Parent=gene-C9F04_RS07665;Dbxref=Genbank:WP_135369137.1;Name=WP_135369137.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9F04_RS07665;product=tryptophan--tRNA ligase;protein_id=WP_135369137.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	15340	16113	.	-	.	ID=gene-C9F04_RS07670;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9F04_RS07670;old_locus_tag=C9F04_07915
NZ_PYKF01000276.1	Protein Homology	CDS	15340	16113	.	-	0	ID=cds-WP_000841654.1;Parent=gene-C9F04_RS07670;Dbxref=Genbank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9F04_RS07670;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	16463	17137	.	+	.	ID=gene-C9F04_RS07675;Name=C9F04_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07675;old_locus_tag=C9F04_07925
NZ_PYKF01000276.1	Protein Homology	CDS	16463	17137	.	+	0	ID=cds-WP_135369136.1;Parent=gene-C9F04_RS07675;Dbxref=Genbank:WP_135369136.1;Name=WP_135369136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9F04_RS07675;product=dienelactone hydrolase family protein;protein_id=WP_135369136.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	17134	17595	.	-	.	ID=gene-C9F04_RS07680;Name=C9F04_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07680;old_locus_tag=C9F04_07930
NZ_PYKF01000276.1	Protein Homology	CDS	17134	17595	.	-	0	ID=cds-WP_001654330.1;Parent=gene-C9F04_RS07680;Dbxref=Genbank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9F04_RS07680;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	17800	18711	.	-	.	ID=gene-C9F04_RS07685;Name=C9F04_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07685;old_locus_tag=C9F04_07935
NZ_PYKF01000276.1	Protein Homology	CDS	17800	18711	.	-	0	ID=cds-WP_000556778.1;Parent=gene-C9F04_RS07685;Dbxref=Genbank:WP_000556778.1;Name=WP_000556778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9F04_RS07685;product=hypothetical protein;protein_id=WP_000556778.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	18987	19982	.	-	.	ID=gene-C9F04_RS07690;Name=C9F04_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07690;old_locus_tag=C9F04_07940
NZ_PYKF01000276.1	Protein Homology	CDS	18987	19982	.	-	0	ID=cds-WP_001240360.1;Parent=gene-C9F04_RS07690;Dbxref=Genbank:WP_001240360.1;Name=WP_001240360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=C9F04_RS07690;product=membrane protein;protein_id=WP_001240360.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	20234	20842	.	-	.	ID=gene-C9F04_RS07695;Name=C9F04_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07695;old_locus_tag=C9F04_07945
NZ_PYKF01000276.1	Protein Homology	CDS	20234	20842	.	-	0	ID=cds-WP_000864865.1;Parent=gene-C9F04_RS07695;Dbxref=Genbank:WP_000864865.1;Name=WP_000864865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9F04_RS07695;product=DUF1062 domain-containing protein;protein_id=WP_000864865.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	21331	21588	.	+	.	ID=gene-C9F04_RS07700;Name=C9F04_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07700;old_locus_tag=C9F04_07960
NZ_PYKF01000276.1	Protein Homology	CDS	21331	21588	.	+	0	ID=cds-WP_001054380.1;Parent=gene-C9F04_RS07700;Dbxref=Genbank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9F04_RS07700;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11
NZ_PYKF01000276.1	RefSeq	gene	21593	23057	.	+	.	ID=gene-C9F04_RS07705;Name=C9F04_RS07705;end_range=23057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07705;old_locus_tag=C9F04_07965;partial=true
NZ_PYKF01000276.1	Protein Homology	CDS	21593	23057	.	+	0	ID=cds-WP_261770761.1;Parent=gene-C9F04_RS07705;Dbxref=Genbank:WP_261770761.1;Name=WP_261770761.1;end_range=23057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F04_RS07705;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_261770761.1;transl_table=11
##sequence-region NZ_PYKF01000683.1 1 9560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000683.1	RefSeq	region	1	9560	.	+	.	ID=NZ_PYKF01000683.1:1..9560;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000683.1	RefSeq	gene	517	3090	.	-	.	ID=gene-C9F04_RS21075;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9F04_RS21075;old_locus_tag=C9F04_21750
NZ_PYKF01000683.1	Protein Homology	CDS	517	3090	.	-	0	ID=cds-WP_146713122.1;Parent=gene-C9F04_RS21075;Dbxref=Genbank:WP_146713122.1;Name=WP_146713122.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9F04_RS21075;product=ATP-dependent chaperone ClpB;protein_id=WP_146713122.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	3220	3951	.	-	.	ID=gene-C9F04_RS21080;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9F04_RS21080;old_locus_tag=C9F04_21755
NZ_PYKF01000683.1	Protein Homology	CDS	3220	3951	.	-	0	ID=cds-WP_146713123.1;Parent=gene-C9F04_RS21080;Dbxref=Genbank:WP_146713123.1;Name=WP_146713123.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9F04_RS21080;product=purine nucleoside phosphorylase YfiH;protein_id=WP_146713123.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	3948	4928	.	-	.	ID=gene-C9F04_RS21085;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9F04_RS21085;old_locus_tag=C9F04_21760
NZ_PYKF01000683.1	Protein Homology	CDS	3948	4928	.	-	0	ID=cds-WP_000079130.1;Parent=gene-C9F04_RS21085;Dbxref=Genbank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9F04_RS21085;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	5060	5797	.	+	.	ID=gene-C9F04_RS21090;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9F04_RS21090;old_locus_tag=C9F04_21765
NZ_PYKF01000683.1	Protein Homology	CDS	5060	5797	.	+	0	ID=cds-WP_000197660.1;Parent=gene-C9F04_RS21090;Dbxref=Genbank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9F04_RS21090;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	6069	6407	.	+	.	ID=gene-C9F04_RS21095;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9F04_RS21095;old_locus_tag=C9F04_21770
NZ_PYKF01000683.1	Protein Homology	CDS	6069	6407	.	+	0	ID=cds-WP_000178449.1;Parent=gene-C9F04_RS21095;Dbxref=Genbank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9F04_RS21095;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11
NZ_PYKF01000683.1	cmsearch	sequence_feature	6510	6635	.	+	.	ID=id-NZ_PYKF01000683.1:6510..6635;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000683.1	RefSeq	gene	6511	6558	.	+	.	ID=gene-C9F04_RS21100;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9F04_RS21100;old_locus_tag=C9F04_21775
NZ_PYKF01000683.1	Protein Homology	CDS	6511	6558	.	+	0	ID=cds-WP_010989056.1;Parent=gene-C9F04_RS21100;Dbxref=Genbank:WP_010989056.1;Name=WP_010989056.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9F04_RS21100;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	6658	7818	.	+	.	ID=gene-C9F04_RS21105;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9F04_RS21105;old_locus_tag=C9F04_21780
NZ_PYKF01000683.1	Protein Homology	CDS	6658	7818	.	+	0	ID=cds-WP_000200080.1;Parent=gene-C9F04_RS21105;Dbxref=Genbank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9F04_RS21105;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	7779	8687	.	-	.	ID=gene-C9F04_RS21110;Name=C9F04_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21110;old_locus_tag=C9F04_21785
NZ_PYKF01000683.1	Protein Homology	CDS	7779	8687	.	-	0	ID=cds-WP_146713124.1;Parent=gene-C9F04_RS21110;Dbxref=Genbank:WP_146713124.1;Name=WP_146713124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9F04_RS21110;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_146713124.1;transl_table=11
NZ_PYKF01000683.1	RefSeq	gene	8745	9560	.	-	.	ID=gene-C9F04_RS21115;Name=tyrA;end_range=9560,.;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9F04_RS21115;old_locus_tag=C9F04_21790;partial=true
NZ_PYKF01000683.1	Protein Homology	CDS	8745	9560	.	-	0	ID=cds-WP_146713125.1;Parent=gene-C9F04_RS21115;Dbxref=Genbank:WP_146713125.1;Name=WP_146713125.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;end_range=9560,.;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9F04_RS21115;partial=true;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_146713125.1;transl_table=11
##sequence-region NZ_PYKF01000730.1 1 9495
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000730.1	RefSeq	region	1	9495	.	+	.	ID=NZ_PYKF01000730.1:1..9495;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000730.1	RefSeq	gene	92	1474	.	-	.	ID=gene-C9F04_RS22675;Name=C9F04_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22675;old_locus_tag=C9F04_23435
NZ_PYKF01000730.1	Protein Homology	CDS	92	1474	.	-	0	ID=cds-WP_135369757.1;Parent=gene-C9F04_RS22675;Dbxref=Genbank:WP_135369757.1;Name=WP_135369757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9F04_RS22675;product=glycoside hydrolase family 1 protein;protein_id=WP_135369757.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	1581	1874	.	-	.	ID=gene-C9F04_RS22680;Name=C9F04_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22680;old_locus_tag=C9F04_23440
NZ_PYKF01000730.1	Protein Homology	CDS	1581	1874	.	-	0	ID=cds-WP_135369758.1;Parent=gene-C9F04_RS22680;Dbxref=Genbank:WP_135369758.1;Name=WP_135369758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9F04_RS22680;product=hypothetical protein;protein_id=WP_135369758.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	2071	4869	.	+	.	ID=gene-C9F04_RS22685;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F04_RS22685;old_locus_tag=C9F04_23445
NZ_PYKF01000730.1	Protein Homology	CDS	2071	4869	.	+	0	ID=cds-WP_001252672.1;Parent=gene-C9F04_RS22685;Dbxref=Genbank:WP_001252672.1;Name=WP_001252672.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F04_RS22685;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	5088	5513	.	+	.	ID=gene-C9F04_RS22690;Name=C9F04_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22690;old_locus_tag=C9F04_23450
NZ_PYKF01000730.1	Protein Homology	CDS	5088	5513	.	+	0	ID=cds-WP_000214106.1;Parent=gene-C9F04_RS22690;Dbxref=Genbank:WP_000214106.1;Name=WP_000214106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9F04_RS22690;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	5524	6009	.	+	.	ID=gene-C9F04_RS22695;Name=C9F04_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22695;old_locus_tag=C9F04_23455
NZ_PYKF01000730.1	Protein Homology	CDS	5524	6009	.	+	0	ID=cds-WP_146713216.1;Parent=gene-C9F04_RS22695;Dbxref=Genbank:WP_146713216.1;Name=WP_146713216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9F04_RS22695;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_146713216.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	6155	6904	.	+	.	ID=gene-C9F04_RS22700;Name=C9F04_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22700;old_locus_tag=C9F04_23460
NZ_PYKF01000730.1	Protein Homology	CDS	6155	6904	.	+	0	ID=cds-WP_000380259.1;Parent=gene-C9F04_RS22700;Dbxref=Genbank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9F04_RS22700;product=PTS sugar transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	6901	7761	.	+	.	ID=gene-C9F04_RS22705;Name=C9F04_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22705;old_locus_tag=C9F04_23465
NZ_PYKF01000730.1	Protein Homology	CDS	6901	7761	.	+	0	ID=cds-WP_001526325.1;Parent=gene-C9F04_RS22705;Dbxref=Genbank:WP_001526325.1;Name=WP_001526325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9F04_RS22705;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	7765	8874	.	+	.	ID=gene-C9F04_RS22710;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9F04_RS22710;old_locus_tag=C9F04_23470
NZ_PYKF01000730.1	Protein Homology	CDS	7765	8874	.	+	0	ID=cds-WP_000188468.1;Parent=gene-C9F04_RS22710;Dbxref=Genbank:WP_000188468.1;Name=WP_000188468.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9F04_RS22710;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188468.1;transl_table=11
NZ_PYKF01000730.1	RefSeq	gene	8861	9495	.	+	.	ID=gene-C9F04_RS22715;Name=C9F04_RS22715;end_range=9495,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22715;old_locus_tag=C9F04_23475;partial=true
NZ_PYKF01000730.1	Protein Homology	CDS	8861	9495	.	+	0	ID=cds-WP_261771482.1;Parent=gene-C9F04_RS22715;Dbxref=Genbank:WP_261771482.1;Name=WP_261771482.1;end_range=9495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9F04_RS22715;partial=true;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_261771482.1;transl_table=11
##sequence-region NZ_PYKF01000242.1 1 9382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000242.1	RefSeq	region	1	9382	.	+	.	ID=NZ_PYKF01000242.1:1..9382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000242.1	RefSeq	pseudogene	8	1285	.	+	.	ID=gene-C9F04_RS06495;Name=astB;gbkey=Gene;gene=astB;gene_biotype=pseudogene;locus_tag=C9F04_RS06495;old_locus_tag=C9F04_06695;pseudo=true
NZ_PYKF01000242.1	Protein Homology	CDS	8	1285	.	+	0	ID=cds-C9F04_RS06495;Parent=gene-C9F04_RS06495;Note=internal stop;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701779.1;locus_tag=C9F04_RS06495;product=N-succinylarginine dihydrolase;pseudo=true;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	1278	2246	.	+	.	ID=gene-C9F04_RS06500;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9F04_RS06500;old_locus_tag=C9F04_06700
NZ_PYKF01000242.1	Protein Homology	CDS	1278	2246	.	+	0	ID=cds-WP_050068360.1;Parent=gene-C9F04_RS06500;Dbxref=Genbank:WP_050068360.1;Name=WP_050068360.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9F04_RS06500;product=succinylglutamate desuccinylase;protein_id=WP_050068360.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	2582	3067	.	+	.	ID=gene-C9F04_RS06505;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9F04_RS06505;old_locus_tag=C9F04_06710
NZ_PYKF01000242.1	Protein Homology	CDS	2582	3067	.	+	0	ID=cds-WP_001229001.1;Parent=gene-C9F04_RS06505;Dbxref=Genbank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9F04_RS06505;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	3142	4023	.	-	.	ID=gene-C9F04_RS06510;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9F04_RS06510;old_locus_tag=C9F04_06715
NZ_PYKF01000242.1	Protein Homology	CDS	3142	4023	.	-	0	ID=cds-WP_001518228.1;Parent=gene-C9F04_RS06510;Dbxref=Genbank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9F04_RS06510;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	4144	4971	.	-	.	ID=gene-C9F04_RS06515;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9F04_RS06515;old_locus_tag=C9F04_06720
NZ_PYKF01000242.1	Protein Homology	CDS	4144	4971	.	-	0	ID=cds-WP_000174981.1;Parent=gene-C9F04_RS06515;Dbxref=Genbank:WP_000174981.1;Name=WP_000174981.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9F04_RS06515;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174981.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	5190	5531	.	+	.	ID=gene-C9F04_RS06520;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9F04_RS06520;old_locus_tag=C9F04_06725
NZ_PYKF01000242.1	Protein Homology	CDS	5190	5531	.	+	0	ID=cds-WP_001039301.1;Parent=gene-C9F04_RS06520;Dbxref=Genbank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9F04_RS06520;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	5832	6152	.	+	.	ID=gene-C9F04_RS06525;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9F04_RS06525;old_locus_tag=C9F04_06735
NZ_PYKF01000242.1	Protein Homology	CDS	5832	6152	.	+	0	ID=cds-WP_000412161.1;Parent=gene-C9F04_RS06525;Dbxref=Genbank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9F04_RS06525;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	6235	7593	.	+	.	ID=gene-C9F04_RS06530;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9F04_RS06530;old_locus_tag=C9F04_06740
NZ_PYKF01000242.1	Protein Homology	CDS	6235	7593	.	+	0	ID=cds-WP_000073064.1;Parent=gene-C9F04_RS06530;Dbxref=Genbank:WP_000073064.1;Name=WP_000073064.1;Ontology_term=GO:0009401,GO:0008982,GO:0016021;gbkey=CDS;gene=chbC;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9F04_RS06530;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073064.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	7644	7991	.	+	.	ID=gene-C9F04_RS06535;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9F04_RS06535;old_locus_tag=C9F04_06745
NZ_PYKF01000242.1	Protein Homology	CDS	7644	7991	.	+	0	ID=cds-WP_000459883.1;Parent=gene-C9F04_RS06535;Dbxref=Genbank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9F04_RS06535;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	gene	8002	8844	.	+	.	ID=gene-C9F04_RS06540;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9F04_RS06540;old_locus_tag=C9F04_06750
NZ_PYKF01000242.1	Protein Homology	CDS	8002	8844	.	+	0	ID=cds-WP_000983393.1;Parent=gene-C9F04_RS06540;Dbxref=Genbank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9F04_RS06540;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11
NZ_PYKF01000242.1	RefSeq	pseudogene	8969	9382	.	+	.	ID=gene-C9F04_RS06545;Name=C9F04_RS06545;end_range=9382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06545;old_locus_tag=C9F04_06755;partial=true;pseudo=true
NZ_PYKF01000242.1	Protein Homology	CDS	8969	9382	.	+	0	ID=cds-C9F04_RS06545;Parent=gene-C9F04_RS06545;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9F04_RS06545;partial=true;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000772.1 1 9341
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000772.1	RefSeq	region	1	9341	.	+	.	ID=NZ_PYKF01000772.1:1..9341;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000772.1	RefSeq	gene	1	494	.	-	.	ID=gene-C9F04_RS23980;Name=C9F04_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23980;old_locus_tag=C9F04_24790;partial=true;start_range=.,1
NZ_PYKF01000772.1	Protein Homology	CDS	1	494	.	-	0	ID=cds-WP_146713276.1;Parent=gene-C9F04_RS23980;Dbxref=Genbank:WP_146713276.1;Name=WP_146713276.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9F04_RS23980;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146713276.1;start_range=.,1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	496	1488	.	-	.	ID=gene-C9F04_RS23985;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9F04_RS23985;old_locus_tag=C9F04_24795
NZ_PYKF01000772.1	Protein Homology	CDS	496	1488	.	-	0	ID=cds-WP_001128869.1;Parent=gene-C9F04_RS23985;Dbxref=Genbank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9F04_RS23985;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	1488	2378	.	-	.	ID=gene-C9F04_RS23990;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9F04_RS23990;old_locus_tag=C9F04_24800
NZ_PYKF01000772.1	Protein Homology	CDS	1488	2378	.	-	0	ID=cds-WP_135369774.1;Parent=gene-C9F04_RS23990;Dbxref=Genbank:WP_135369774.1;Name=WP_135369774.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9F04_RS23990;product=peptide ABC transporter permease SapC;protein_id=WP_135369774.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	2365	3330	.	-	.	ID=gene-C9F04_RS23995;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9F04_RS23995;old_locus_tag=C9F04_24805
NZ_PYKF01000772.1	Protein Homology	CDS	2365	3330	.	-	0	ID=cds-WP_000583298.1;Parent=gene-C9F04_RS23995;Dbxref=Genbank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9F04_RS23995;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	pseudogene	3327	4976	.	-	.	ID=gene-C9F04_RS24000;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=pseudogene;locus_tag=C9F04_RS24000;old_locus_tag=C9F04_24810;pseudo=true
NZ_PYKF01000772.1	Protein Homology	CDS	3327	4976	.	-	0	ID=cds-C9F04_RS24000;Parent=gene-C9F04_RS24000;Note=internal stop;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F04_RS24000;product=peptide ABC transporter substrate-binding protein SapA;pseudo=true;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	5088	6068	.	-	.	ID=gene-C9F04_RS24005;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9F04_RS24005;old_locus_tag=C9F04_24815
NZ_PYKF01000772.1	Protein Homology	CDS	5088	6068	.	-	0	ID=cds-WP_146713277.1;Parent=gene-C9F04_RS24005;Dbxref=Genbank:WP_146713277.1;Name=WP_146713277.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9F04_RS24005;product=phage shock protein operon transcriptional activator;protein_id=WP_146713277.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	6239	6907	.	+	.	ID=gene-C9F04_RS24010;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9F04_RS24010;old_locus_tag=C9F04_24820
NZ_PYKF01000772.1	Protein Homology	CDS	6239	6907	.	+	0	ID=cds-WP_000511000.1;Parent=gene-C9F04_RS24010;Dbxref=Genbank:WP_000511000.1;Name=WP_000511000.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9F04_RS24010;product=phage shock protein PspA;protein_id=WP_000511000.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	6967	7191	.	+	.	ID=gene-C9F04_RS24015;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9F04_RS24015;old_locus_tag=C9F04_24825
NZ_PYKF01000772.1	Protein Homology	CDS	6967	7191	.	+	0	ID=cds-WP_001274953.1;Parent=gene-C9F04_RS24015;Dbxref=Genbank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9F04_RS24015;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	7191	7550	.	+	.	ID=gene-C9F04_RS24020;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9F04_RS24020;old_locus_tag=C9F04_24830
NZ_PYKF01000772.1	Protein Homology	CDS	7191	7550	.	+	0	ID=cds-WP_000508938.1;Parent=gene-C9F04_RS24020;Dbxref=Genbank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9F04_RS24020;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	7573	7791	.	+	.	ID=gene-C9F04_RS24025;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9F04_RS24025;old_locus_tag=C9F04_24835
NZ_PYKF01000772.1	Protein Homology	CDS	7573	7791	.	+	0	ID=cds-WP_001097607.1;Parent=gene-C9F04_RS24025;Dbxref=Genbank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9F04_RS24025;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	7867	8181	.	+	.	ID=gene-C9F04_RS24030;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9F04_RS24030;old_locus_tag=C9F04_24840
NZ_PYKF01000772.1	Protein Homology	CDS	7867	8181	.	+	0	ID=cds-WP_000913428.1;Parent=gene-C9F04_RS24030;Dbxref=Genbank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9F04_RS24030;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11
NZ_PYKF01000772.1	RefSeq	gene	8330	9341	.	+	.	ID=gene-C9F04_RS24035;Name=C9F04_RS24035;end_range=9341,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24035;old_locus_tag=C9F04_24845;partial=true
NZ_PYKF01000772.1	Protein Homology	CDS	8330	9341	.	+	0	ID=cds-WP_186799092.1;Parent=gene-C9F04_RS24035;Dbxref=Genbank:WP_186799092.1;Name=WP_186799092.1;end_range=9341,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9F04_RS24035;partial=true;product=YcjX family protein;protein_id=WP_186799092.1;transl_table=11
##sequence-region NZ_PYKF01000207.1 1 9322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000207.1	RefSeq	region	1	9322	.	+	.	ID=NZ_PYKF01000207.1:1..9322;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000207.1	RefSeq	gene	1	721	.	+	.	ID=gene-C9F04_RS05040;Name=C9F04_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05040;old_locus_tag=C9F04_05205;partial=true;start_range=.,1
NZ_PYKF01000207.1	Protein Homology	CDS	1	721	.	+	1	ID=cds-WP_146712367.1;Parent=gene-C9F04_RS05040;Dbxref=Genbank:WP_146712367.1;Name=WP_146712367.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032433.1;locus_tag=C9F04_RS05040;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_146712367.1;start_range=.,1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	794	1720	.	+	.	ID=gene-C9F04_RS05045;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9F04_RS05045;old_locus_tag=C9F04_05210
NZ_PYKF01000207.1	Protein Homology	CDS	794	1720	.	+	0	ID=cds-WP_146712368.1;Parent=gene-C9F04_RS05045;Dbxref=Genbank:WP_146712368.1;Name=WP_146712368.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F04_RS05045;product=glutaminase B;protein_id=WP_146712368.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	1720	2079	.	+	.	ID=gene-C9F04_RS05050;Name=C9F04_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05050;old_locus_tag=C9F04_05215
NZ_PYKF01000207.1	Protein Homology	CDS	1720	2079	.	+	0	ID=cds-WP_000992451.1;Parent=gene-C9F04_RS05050;Dbxref=Genbank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9F04_RS05050;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	2303	3250	.	+	.	ID=gene-C9F04_RS05055;Name=C9F04_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05055;old_locus_tag=C9F04_05220
NZ_PYKF01000207.1	Protein Homology	CDS	2303	3250	.	+	0	ID=cds-WP_135369108.1;Parent=gene-C9F04_RS05055;Dbxref=Genbank:WP_135369108.1;Name=WP_135369108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460487.1;locus_tag=C9F04_RS05055;product=bestrophin family protein;protein_id=WP_135369108.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	3306	3848	.	-	.	ID=gene-C9F04_RS05060;Name=C9F04_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05060;old_locus_tag=C9F04_05225
NZ_PYKF01000207.1	Protein Homology	CDS	3306	3848	.	-	0	ID=cds-WP_050067591.1;Parent=gene-C9F04_RS05060;Dbxref=Genbank:WP_050067591.1;Name=WP_050067591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9F04_RS05060;product=nuclear transport factor 2 family protein;protein_id=WP_050067591.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	4565	5683	.	+	.	ID=gene-C9F04_RS05065;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9F04_RS05065;old_locus_tag=C9F04_05230
NZ_PYKF01000207.1	Protein Homology	CDS	4565	5683	.	+	0	ID=cds-WP_000758336.1;Parent=gene-C9F04_RS05065;Dbxref=Genbank:WP_000758336.1;Name=WP_000758336.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9F04_RS05065;product=porin OmpC;protein_id=WP_000758336.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	5824	6165	.	-	.	ID=gene-C9F04_RS05070;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F04_RS05070;old_locus_tag=C9F04_05235
NZ_PYKF01000207.1	Protein Homology	CDS	5824	6165	.	-	0	ID=cds-WP_000544772.1;Parent=gene-C9F04_RS05070;Dbxref=Genbank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9F04_RS05070;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	6178	7065	.	-	.	ID=gene-C9F04_RS05075;Name=C9F04_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05075;old_locus_tag=C9F04_05240
NZ_PYKF01000207.1	Protein Homology	CDS	6178	7065	.	-	0	ID=cds-WP_146712369.1;Parent=gene-C9F04_RS05075;Dbxref=Genbank:WP_146712369.1;Name=WP_146712369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9F04_RS05075;product=ATP/GTP-binding protein;protein_id=WP_146712369.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	7053	8114	.	-	.	ID=gene-C9F04_RS05080;Name=C9F04_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05080;old_locus_tag=C9F04_05245
NZ_PYKF01000207.1	Protein Homology	CDS	7053	8114	.	-	0	ID=cds-WP_001016756.1;Parent=gene-C9F04_RS05080;Dbxref=Genbank:WP_001016756.1;Name=WP_001016756.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9F04_RS05080;product=rubredoxin;protein_id=WP_001016756.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	8132	8542	.	-	.	ID=gene-C9F04_RS05085;Name=C9F04_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05085;old_locus_tag=C9F04_05250
NZ_PYKF01000207.1	Protein Homology	CDS	8132	8542	.	-	0	ID=cds-WP_000155986.1;Parent=gene-C9F04_RS05085;Dbxref=Genbank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9F04_RS05085;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	8539	8838	.	-	.	ID=gene-C9F04_RS05090;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F04_RS05090;old_locus_tag=C9F04_05255
NZ_PYKF01000207.1	Protein Homology	CDS	8539	8838	.	-	0	ID=cds-WP_000334902.1;Parent=gene-C9F04_RS05090;Dbxref=Genbank:WP_000334902.1;Name=WP_000334902.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9F04_RS05090;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334902.1;transl_table=11
NZ_PYKF01000207.1	RefSeq	gene	8838	9322	.	-	.	ID=gene-C9F04_RS05095;Name=C9F04_RS05095;end_range=9322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05095;old_locus_tag=C9F04_05260;partial=true
NZ_PYKF01000207.1	Protein Homology	CDS	8838	9322	.	-	2	ID=cds-WP_146712370.1;Parent=gene-C9F04_RS05095;Dbxref=Genbank:WP_146712370.1;Name=WP_146712370.1;Ontology_term=GO:0008233;end_range=9322,.;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9F04_RS05095;partial=true;product=hydrogenase maturation protease;protein_id=WP_146712370.1;transl_table=11
##sequence-region NZ_PYKF01000594.1 1 9218
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000594.1	RefSeq	region	1	9218	.	+	.	ID=NZ_PYKF01000594.1:1..9218;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000594.1	RefSeq	gene	6	521	.	+	.	ID=gene-C9F04_RS17635;Name=C9F04_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17635;old_locus_tag=C9F04_18195
NZ_PYKF01000594.1	Protein Homology	CDS	6	521	.	+	0	ID=cds-WP_146712963.1;Parent=gene-C9F04_RS17635;Dbxref=Genbank:WP_146712963.1;Name=WP_146712963.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=C9F04_RS17635;product=phage major tail tube protein;protein_id=WP_146712963.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	576	878	.	+	.	ID=gene-C9F04_RS17640;Name=C9F04_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17640;old_locus_tag=C9F04_18200
NZ_PYKF01000594.1	Protein Homology	CDS	576	878	.	+	0	ID=cds-WP_001280962.1;Parent=gene-C9F04_RS17640;Dbxref=Genbank:WP_001280962.1;Name=WP_001280962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9F04_RS17640;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	893	1012	.	+	.	ID=gene-C9F04_RS17645;Name=C9F04_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17645;old_locus_tag=C9F04_18205
NZ_PYKF01000594.1	Protein Homology	CDS	893	1012	.	+	0	ID=cds-WP_000763317.1;Parent=gene-C9F04_RS17645;Dbxref=Genbank:WP_000763317.1;Name=WP_000763317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9F04_RS17645;product=GpE family phage tail protein;protein_id=WP_000763317.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	1005	3812	.	+	.	ID=gene-C9F04_RS17650;Name=C9F04_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17650;old_locus_tag=C9F04_18210
NZ_PYKF01000594.1	Protein Homology	CDS	1005	3812	.	+	0	ID=cds-WP_146712960.1;Parent=gene-C9F04_RS17650;Dbxref=Genbank:WP_146712960.1;Name=WP_146712960.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9F04_RS17650;product=phage tail tape measure protein;protein_id=WP_146712960.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	3809	4294	.	+	.	ID=gene-C9F04_RS17655;Name=C9F04_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17655;old_locus_tag=C9F04_18215
NZ_PYKF01000594.1	Protein Homology	CDS	3809	4294	.	+	0	ID=cds-WP_000980409.1;Parent=gene-C9F04_RS17655;Dbxref=Genbank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9F04_RS17655;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	4291	5391	.	+	.	ID=gene-C9F04_RS17660;Name=C9F04_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17660;old_locus_tag=C9F04_18220
NZ_PYKF01000594.1	Protein Homology	CDS	4291	5391	.	+	0	ID=cds-WP_146712961.1;Parent=gene-C9F04_RS17660;Dbxref=Genbank:WP_146712961.1;Name=WP_146712961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F04_RS17660;product=phage late control D family protein;protein_id=WP_146712961.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	5460	5678	.	+	.	ID=gene-C9F04_RS17665;Name=C9F04_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17665;old_locus_tag=C9F04_18225
NZ_PYKF01000594.1	Protein Homology	CDS	5460	5678	.	+	0	ID=cds-WP_000980498.1;Parent=gene-C9F04_RS17665;Dbxref=Genbank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9F04_RS17665;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	5928	6770	.	-	.	ID=gene-C9F04_RS17670;Name=C9F04_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17670;old_locus_tag=C9F04_18230
NZ_PYKF01000594.1	Protein Homology	CDS	5928	6770	.	-	0	ID=cds-WP_186799053.1;Parent=gene-C9F04_RS17670;Dbxref=Genbank:WP_186799053.1;Name=WP_186799053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192753.1;locus_tag=C9F04_RS17670;product=DUF4942 domain-containing protein;protein_id=WP_186799053.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	6886	7227	.	-	.	ID=gene-C9F04_RS17675;Name=C9F04_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17675;old_locus_tag=C9F04_18235
NZ_PYKF01000594.1	Protein Homology	CDS	6886	7227	.	-	0	ID=cds-WP_135369458.1;Parent=gene-C9F04_RS17675;Dbxref=Genbank:WP_135369458.1;Name=WP_135369458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194750.1;locus_tag=C9F04_RS17675;product=TA system toxin CbtA family protein;protein_id=WP_135369458.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	7270	7611	.	-	.	ID=gene-C9F04_RS17680;Name=C9F04_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17680;old_locus_tag=C9F04_18240
NZ_PYKF01000594.1	Protein Homology	CDS	7270	7611	.	-	0	ID=cds-WP_135369459.1;Parent=gene-C9F04_RS17680;Dbxref=Genbank:WP_135369459.1;Name=WP_135369459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380486.1;locus_tag=C9F04_RS17680;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_135369459.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	7644	7865	.	-	.	ID=gene-C9F04_RS17685;Name=C9F04_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17685;old_locus_tag=C9F04_18245
NZ_PYKF01000594.1	Protein Homology	CDS	7644	7865	.	-	0	ID=cds-WP_135369460.1;Parent=gene-C9F04_RS17685;Dbxref=Genbank:WP_135369460.1;Name=WP_135369460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246875.1;locus_tag=C9F04_RS17685;product=DUF987 family protein;protein_id=WP_135369460.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	7862	8365	.	-	.	ID=gene-C9F04_RS17690;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9F04_RS17690;old_locus_tag=C9F04_18250
NZ_PYKF01000594.1	Protein Homology	CDS	7862	8365	.	-	0	ID=cds-WP_135369461.1;Parent=gene-C9F04_RS17690;Dbxref=Genbank:WP_135369461.1;Name=WP_135369461.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=C9F04_RS17690;product=DNA repair protein RadC;protein_id=WP_135369461.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	8377	8844	.	-	.	ID=gene-C9F04_RS17695;Name=C9F04_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17695;old_locus_tag=C9F04_18255
NZ_PYKF01000594.1	Protein Homology	CDS	8377	8844	.	-	0	ID=cds-WP_135369462.1;Parent=gene-C9F04_RS17695;Dbxref=Genbank:WP_135369462.1;Name=WP_135369462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239282.1;locus_tag=C9F04_RS17695;product=antirestriction protein;protein_id=WP_135369462.1;transl_table=11
NZ_PYKF01000594.1	RefSeq	gene	8913	9218	.	-	.	ID=gene-C9F04_RS17700;Name=C9F04_RS17700;end_range=9218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17700;old_locus_tag=C9F04_18260;partial=true
NZ_PYKF01000594.1	Protein Homology	CDS	8913	9218	.	-	0	ID=cds-WP_146712962.1;Parent=gene-C9F04_RS17700;Dbxref=Genbank:WP_146712962.1;Name=WP_146712962.1;end_range=9218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=C9F04_RS17700;partial=true;product=DUF932 domain-containing protein;protein_id=WP_146712962.1;transl_table=11
##sequence-region NZ_PYKF01000174.1 1 9118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000174.1	RefSeq	region	1	9118	.	+	.	ID=NZ_PYKF01000174.1:1..9118;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000174.1	RefSeq	gene	1	5437	.	-	.	ID=gene-C9F04_RS03815;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=C9F04_RS03815;old_locus_tag=C9F04_03940;partial=true;start_range=.,1
NZ_PYKF01000174.1	Protein Homology	CDS	1	5437	.	-	0	ID=cds-WP_186798993.1;Parent=gene-C9F04_RS03815;Dbxref=Genbank:WP_186798993.1;Name=WP_186798993.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=C9F04_RS03815;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_186798993.1;start_range=.,1;transl_table=11
NZ_PYKF01000174.1	RefSeq	gene	6087	6314	.	-	.	ID=gene-C9F04_RS03820;Name=C9F04_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03820;old_locus_tag=C9F04_03945
NZ_PYKF01000174.1	GeneMarkS-2+	CDS	6087	6314	.	-	0	ID=cds-WP_031605669.1;Parent=gene-C9F04_RS03820;Dbxref=Genbank:WP_031605669.1;Name=WP_031605669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS03820;product=hypothetical protein;protein_id=WP_031605669.1;transl_table=11
NZ_PYKF01000174.1	RefSeq	gene	6473	9118	.	-	.	ID=gene-C9F04_RS03825;Name=C9F04_RS03825;end_range=9118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03825;old_locus_tag=C9F04_03950;partial=true
NZ_PYKF01000174.1	Protein Homology	CDS	6473	9118	.	-	0	ID=cds-WP_222591886.1;Parent=gene-C9F04_RS03825;Dbxref=Genbank:WP_222591886.1;Name=WP_222591886.1;end_range=9118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9F04_RS03825;partial=true;product=DUF823 domain-containing adhesin;protein_id=WP_222591886.1;transl_table=11
##sequence-region NZ_PYKF01000684.1 1 9060
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000684.1	RefSeq	region	1	9060	.	+	.	ID=NZ_PYKF01000684.1:1..9060;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000684.1	RefSeq	gene	1	1012	.	-	.	ID=gene-C9F04_RS21120;Name=C9F04_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21120;old_locus_tag=C9F04_21795;partial=true;start_range=.,1
NZ_PYKF01000684.1	Protein Homology	CDS	1	1012	.	-	0	ID=cds-WP_186799067.1;Parent=gene-C9F04_RS21120;Dbxref=Genbank:WP_186799067.1;Name=WP_186799067.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F04_RS21120;partial=true;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_186799067.1;start_range=.,1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	1005	1535	.	-	.	ID=gene-C9F04_RS21125;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9F04_RS21125;old_locus_tag=C9F04_21800
NZ_PYKF01000684.1	Protein Homology	CDS	1005	1535	.	-	0	ID=cds-WP_146713126.1;Parent=gene-C9F04_RS21125;Dbxref=Genbank:WP_146713126.1;Name=WP_146713126.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9F04_RS21125;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_146713126.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	pseudogene	1656	1736	.	+	.	ID=gene-C9F04_RS27190;Name=C9F04_RS27190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27190;old_locus_tag=C9F04_21805;partial=true;pseudo=true;start_range=.,1656
NZ_PYKF01000684.1	Protein Homology	CDS	1656	1736	.	+	0	ID=cds-C9F04_RS27190;Parent=gene-C9F04_RS27190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F04_RS27190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1656;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	2088	3977	.	-	.	ID=gene-C9F04_RS21130;Name=C9F04_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21130;old_locus_tag=C9F04_21815
NZ_PYKF01000684.1	Protein Homology	CDS	2088	3977	.	-	0	ID=cds-WP_146713127.1;Parent=gene-C9F04_RS21130;Dbxref=Genbank:WP_146713127.1;Name=WP_146713127.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9F04_RS21130;product=sulfatase-like hydrolase/transferase;protein_id=WP_146713127.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	4875	5165	.	+	.	ID=gene-C9F04_RS21135;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9F04_RS21135;old_locus_tag=C9F04_21825
NZ_PYKF01000684.1	Protein Homology	CDS	4875	5165	.	+	0	ID=cds-WP_000745961.1;Parent=gene-C9F04_RS21135;Dbxref=Genbank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9F04_RS21135;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	5389	5805	.	-	.	ID=gene-C9F04_RS21140;Name=C9F04_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21140;old_locus_tag=C9F04_21830
NZ_PYKF01000684.1	Protein Homology	CDS	5389	5805	.	-	0	ID=cds-WP_135369279.1;Parent=gene-C9F04_RS21140;Dbxref=Genbank:WP_135369279.1;Name=WP_135369279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9F04_RS21140;product=hypothetical protein;protein_id=WP_135369279.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	6099	6329	.	-	.	ID=gene-C9F04_RS21145;Name=C9F04_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21145;old_locus_tag=C9F04_21835
NZ_PYKF01000684.1	Protein Homology	CDS	6099	6329	.	-	0	ID=cds-WP_001172089.1;Parent=gene-C9F04_RS21145;Dbxref=Genbank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9F04_RS21145;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	6418	7758	.	-	.	ID=gene-C9F04_RS21150;Name=C9F04_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21150;old_locus_tag=C9F04_21840
NZ_PYKF01000684.1	Protein Homology	CDS	6418	7758	.	-	0	ID=cds-WP_146713128.1;Parent=gene-C9F04_RS21150;Dbxref=Genbank:WP_146713128.1;Name=WP_146713128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9F04_RS21150;product=MFS transporter;protein_id=WP_146713128.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	7905	8192	.	-	.	ID=gene-C9F04_RS21155;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9F04_RS21155;old_locus_tag=C9F04_21845
NZ_PYKF01000684.1	Protein Homology	CDS	7905	8192	.	-	0	ID=cds-WP_000203736.1;Parent=gene-C9F04_RS21155;Dbxref=Genbank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9F04_RS21155;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11
NZ_PYKF01000684.1	RefSeq	gene	8189	9060	.	-	.	ID=gene-C9F04_RS21160;Name=fixC;end_range=9060,.;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=C9F04_RS21160;old_locus_tag=C9F04_21850;partial=true
NZ_PYKF01000684.1	Protein Homology	CDS	8189	9060	.	-	2	ID=cds-WP_146713129.1;Parent=gene-C9F04_RS21160;Dbxref=Genbank:WP_146713129.1;Name=WP_146713129.1;end_range=9060,.;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9F04_RS21160;partial=true;product=FAD-dependent oxidoreductase FixC;protein_id=WP_146713129.1;transl_table=11
##sequence-region NZ_PYKF01000696.1 1 9057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000696.1	RefSeq	region	1	9057	.	+	.	ID=NZ_PYKF01000696.1:1..9057;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000696.1	RefSeq	gene	1	1205	.	-	.	ID=gene-C9F04_RS21555;Name=C9F04_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21555;old_locus_tag=C9F04_22265;partial=true;start_range=.,1
NZ_PYKF01000696.1	Protein Homology	CDS	1	1205	.	-	0	ID=cds-WP_261771444.1;Parent=gene-C9F04_RS21555;Dbxref=Genbank:WP_261771444.1;Name=WP_261771444.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9F04_RS21555;partial=true;product=L-serine ammonia-lyase;protein_id=WP_261771444.1;start_range=.,1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	1264	2553	.	-	.	ID=gene-C9F04_RS21560;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9F04_RS21560;old_locus_tag=C9F04_22270
NZ_PYKF01000696.1	Protein Homology	CDS	1264	2553	.	-	0	ID=cds-WP_146713146.1;Parent=gene-C9F04_RS21560;Dbxref=Genbank:WP_146713146.1;Name=WP_146713146.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9F04_RS21560;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_146713146.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	3118	4482	.	-	.	ID=gene-C9F04_RS21565;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9F04_RS21565;old_locus_tag=C9F04_22275
NZ_PYKF01000696.1	Protein Homology	CDS	3118	4482	.	-	0	ID=cds-WP_000627973.1;Parent=gene-C9F04_RS21565;Dbxref=Genbank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9F04_RS21565;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	4595	5443	.	-	.	ID=gene-C9F04_RS21570;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9F04_RS21570;old_locus_tag=C9F04_22280
NZ_PYKF01000696.1	Protein Homology	CDS	4595	5443	.	-	0	ID=cds-WP_146713147.1;Parent=gene-C9F04_RS21570;Dbxref=Genbank:WP_146713147.1;Name=WP_146713147.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9F04_RS21570;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_146713147.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	5512	6057	.	+	.	ID=gene-C9F04_RS21575;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9F04_RS21575;old_locus_tag=C9F04_22285
NZ_PYKF01000696.1	Protein Homology	CDS	5512	6057	.	+	0	ID=cds-WP_000343990.1;Parent=gene-C9F04_RS21575;Dbxref=Genbank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9F04_RS21575;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	6669	6998	.	+	.	ID=gene-C9F04_RS21585;Name=C9F04_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21585;old_locus_tag=C9F04_22295
NZ_PYKF01000696.1	Protein Homology	CDS	6669	6998	.	+	0	ID=cds-WP_001804977.1;Parent=gene-C9F04_RS21585;Dbxref=Genbank:WP_001804977.1;Name=WP_001804977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9F04_RS21585;product=YqcC family protein;protein_id=WP_001804977.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	6998	7780	.	+	.	ID=gene-C9F04_RS21590;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9F04_RS21590;old_locus_tag=C9F04_22300
NZ_PYKF01000696.1	Protein Homology	CDS	6998	7780	.	+	0	ID=cds-WP_146713148.1;Parent=gene-C9F04_RS21590;Dbxref=Genbank:WP_146713148.1;Name=WP_146713148.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9F04_RS21590;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_146713148.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	7799	8248	.	+	.	ID=gene-C9F04_RS21595;Name=C9F04_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21595;old_locus_tag=C9F04_22305
NZ_PYKF01000696.1	Protein Homology	CDS	7799	8248	.	+	0	ID=cds-WP_000807731.1;Parent=gene-C9F04_RS21595;Dbxref=Genbank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9F04_RS21595;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	8398	8646	.	-	.	ID=gene-C9F04_RS21600;Name=C9F04_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21600;old_locus_tag=C9F04_22310
NZ_PYKF01000696.1	GeneMarkS-2+	CDS	8398	8646	.	-	0	ID=cds-WP_001531815.1;Parent=gene-C9F04_RS21600;Dbxref=Genbank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS21600;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11
NZ_PYKF01000696.1	RefSeq	gene	8729	9057	.	+	.	ID=gene-C9F04_RS21605;Name=C9F04_RS21605;end_range=9057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21605;old_locus_tag=C9F04_22315;partial=true
NZ_PYKF01000696.1	Protein Homology	CDS	8729	9057	.	+	0	ID=cds-WP_146713149.1;Parent=gene-C9F04_RS21605;Dbxref=Genbank:WP_146713149.1;Name=WP_146713149.1;Ontology_term=GO:0055085,GO:0022857;end_range=9057,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9F04_RS21605;partial=true;product=MFS transporter;protein_id=WP_146713149.1;transl_table=11
##sequence-region NZ_PYKF01000810.1 1 9057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000810.1	RefSeq	region	1	9057	.	+	.	ID=NZ_PYKF01000810.1:1..9057;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000810.1	RefSeq	pseudogene	1	140	.	+	.	ID=gene-C9F04_RS25345;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=C9F04_RS25345;old_locus_tag=C9F04_26210;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000810.1	Protein Homology	CDS	1	140	.	+	2	ID=cds-C9F04_RS25345;Parent=gene-C9F04_RS25345;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9F04_RS25345;partial=true;product=flagellar hook-associated protein FlgL;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	397	3600	.	-	.	ID=gene-C9F04_RS25350;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9F04_RS25350;old_locus_tag=C9F04_26220
NZ_PYKF01000810.1	Protein Homology	CDS	397	3600	.	-	0	ID=cds-WP_146713345.1;Parent=gene-C9F04_RS25350;Dbxref=Genbank:WP_146713345.1;Name=WP_146713345.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9F04_RS25350;product=ribonuclease E;protein_id=WP_146713345.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	4174	5133	.	+	.	ID=gene-C9F04_RS25355;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9F04_RS25355;old_locus_tag=C9F04_26230
NZ_PYKF01000810.1	Protein Homology	CDS	4174	5133	.	+	0	ID=cds-WP_000846316.1;Parent=gene-C9F04_RS25355;Dbxref=Genbank:WP_000846316.1;Name=WP_000846316.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9F04_RS25355;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846316.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	5289	6032	.	+	.	ID=gene-C9F04_RS25360;Name=C9F04_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25360;old_locus_tag=C9F04_26235
NZ_PYKF01000810.1	Protein Homology	CDS	5289	6032	.	+	0	ID=cds-WP_080083309.1;Parent=gene-C9F04_RS25360;Dbxref=Genbank:WP_080083309.1;Name=WP_080083309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9F04_RS25360;product=DUF3053 domain-containing protein;protein_id=WP_080083309.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	6238	6462	.	+	.	ID=gene-C9F04_RS25365;Name=C9F04_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25365;old_locus_tag=C9F04_26240
NZ_PYKF01000810.1	GeneMarkS-2+	CDS	6238	6462	.	+	0	ID=cds-WP_000528423.1;Parent=gene-C9F04_RS25365;Dbxref=Genbank:WP_000528423.1;Name=WP_000528423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS25365;product=hypothetical protein;protein_id=WP_000528423.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	6534	7118	.	-	.	ID=gene-C9F04_RS25370;Name=C9F04_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25370;old_locus_tag=C9F04_26245
NZ_PYKF01000810.1	Protein Homology	CDS	6534	7118	.	-	0	ID=cds-WP_001137605.1;Parent=gene-C9F04_RS25370;Dbxref=Genbank:WP_001137605.1;Name=WP_001137605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9F04_RS25370;product=Maf-like protein;protein_id=WP_001137605.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	7316	7837	.	+	.	ID=gene-C9F04_RS25375;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9F04_RS25375;old_locus_tag=C9F04_26250
NZ_PYKF01000810.1	Protein Homology	CDS	7316	7837	.	+	0	ID=cds-WP_001174492.1;Parent=gene-C9F04_RS25375;Dbxref=Genbank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9F04_RS25375;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	7889	8062	.	+	.	ID=gene-C9F04_RS25380;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9F04_RS25380;old_locus_tag=C9F04_26255
NZ_PYKF01000810.1	Protein Homology	CDS	7889	8062	.	+	0	ID=cds-WP_000290727.1;Parent=gene-C9F04_RS25380;Dbxref=Genbank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9F04_RS25380;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_PYKF01000810.1	RefSeq	gene	8196	9057	.	+	.	ID=gene-C9F04_RS25385;Name=plsX;end_range=9057,.;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9F04_RS25385;old_locus_tag=C9F04_26260;partial=true
NZ_PYKF01000810.1	Protein Homology	CDS	8196	9057	.	+	0	ID=cds-WP_146713346.1;Parent=gene-C9F04_RS25385;Dbxref=Genbank:WP_146713346.1;Name=WP_146713346.1;Ontology_term=GO:0008610,GO:0043811;end_range=9057,.;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9F04_RS25385;partial=true;product=phosphate acyltransferase PlsX;protein_id=WP_146713346.1;transl_table=11
##sequence-region NZ_PYKF01000694.1 1 22574
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000694.1	RefSeq	region	1	22574	.	+	.	ID=NZ_PYKF01000694.1:1..22574;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000694.1	RefSeq	pseudogene	1	6197	.	-	.	ID=gene-C9F04_RS21335;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=C9F04_RS21335;old_locus_tag=C9F04_22025;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000694.1	Protein Homology	CDS	1	6197	.	-	0	ID=cds-C9F04_RS21335;Parent=gene-C9F04_RS21335;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F04_RS21335;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	6214	7491	.	-	.	ID=gene-C9F04_RS21340;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=C9F04_RS21340;old_locus_tag=C9F04_22030
NZ_PYKF01000694.1	Protein Homology	CDS	6214	7491	.	-	0	ID=cds-WP_001081935.1;Parent=gene-C9F04_RS21340;Dbxref=Genbank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9F04_RS21340;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	7488	8807	.	-	.	ID=gene-C9F04_RS21345;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9F04_RS21345;old_locus_tag=C9F04_22035
NZ_PYKF01000694.1	Protein Homology	CDS	7488	8807	.	-	0	ID=cds-WP_135369219.1;Parent=gene-C9F04_RS21345;Dbxref=Genbank:WP_135369219.1;Name=WP_135369219.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9F04_RS21345;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_135369219.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	8797	10185	.	-	.	ID=gene-C9F04_RS21350;Name=C9F04_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21350;old_locus_tag=C9F04_22040
NZ_PYKF01000694.1	Protein Homology	CDS	8797	10185	.	-	0	ID=cds-WP_135369220.1;Parent=gene-C9F04_RS21350;Dbxref=Genbank:WP_135369220.1;Name=WP_135369220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9F04_RS21350;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_135369220.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	10182	10814	.	-	.	ID=gene-C9F04_RS21355;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9F04_RS21355;old_locus_tag=C9F04_22045
NZ_PYKF01000694.1	Protein Homology	CDS	10182	10814	.	-	0	ID=cds-WP_000389232.1;Parent=gene-C9F04_RS21355;Dbxref=Genbank:WP_000389232.1;Name=WP_000389232.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9F04_RS21355;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389232.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	11854	12384	.	-	.	ID=gene-C9F04_RS21365;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9F04_RS21365;old_locus_tag=C9F04_22055
NZ_PYKF01000694.1	Protein Homology	CDS	11854	12384	.	-	0	ID=cds-WP_000168322.1;Parent=gene-C9F04_RS21365;Dbxref=Genbank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9F04_RS21365;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	12632	15457	.	+	.	ID=gene-C9F04_RS21370;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9F04_RS21370;old_locus_tag=C9F04_22065
NZ_PYKF01000694.1	Protein Homology	CDS	12632	15457	.	+	0	ID=cds-WP_146713139.1;Parent=gene-C9F04_RS21370;Dbxref=Genbank:WP_146713139.1;Name=WP_146713139.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9F04_RS21370;product=excinuclease ABC subunit UvrA;protein_id=WP_146713139.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	15589	16044	.	+	.	ID=gene-C9F04_RS21375;Name=C9F04_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21375;old_locus_tag=C9F04_22070
NZ_PYKF01000694.1	Protein Homology	CDS	15589	16044	.	+	0	ID=cds-WP_072104649.1;Parent=gene-C9F04_RS21375;Dbxref=Genbank:WP_072104649.1;Name=WP_072104649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9F04_RS21375;product=hypothetical protein;protein_id=WP_072104649.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	16031	16369	.	+	.	ID=gene-C9F04_RS21380;Name=C9F04_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21380;old_locus_tag=C9F04_22075
NZ_PYKF01000694.1	Protein Homology	CDS	16031	16369	.	+	0	ID=cds-WP_000146590.1;Parent=gene-C9F04_RS21380;Dbxref=Genbank:WP_000146590.1;Name=WP_000146590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9F04_RS21380;product=hypothetical protein;protein_id=WP_000146590.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	16370	16726	.	-	.	ID=gene-C9F04_RS21385;Name=C9F04_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21385;old_locus_tag=C9F04_22080
NZ_PYKF01000694.1	Protein Homology	CDS	16370	16726	.	-	0	ID=cds-WP_000155665.1;Parent=gene-C9F04_RS21385;Dbxref=Genbank:WP_000155665.1;Name=WP_000155665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9F04_RS21385;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	16729	17145	.	-	.	ID=gene-C9F04_RS21390;Name=C9F04_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21390;old_locus_tag=C9F04_22085
NZ_PYKF01000694.1	Protein Homology	CDS	16729	17145	.	-	0	ID=cds-WP_000270392.1;Parent=gene-C9F04_RS21390;Dbxref=Genbank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9F04_RS21390;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	17274	17987	.	-	.	ID=gene-C9F04_RS21395;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9F04_RS21395;old_locus_tag=C9F04_22090
NZ_PYKF01000694.1	Protein Homology	CDS	17274	17987	.	-	0	ID=cds-WP_000724435.1;Parent=gene-C9F04_RS21395;Dbxref=Genbank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9F04_RS21395;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	18174	19367	.	-	.	ID=gene-C9F04_RS21400;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9F04_RS21400;old_locus_tag=C9F04_22100
NZ_PYKF01000694.1	Protein Homology	CDS	18174	19367	.	-	0	ID=cds-WP_000486910.1;Parent=gene-C9F04_RS21400;Dbxref=Genbank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9F04_RS21400;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	19553	20632	.	-	.	ID=gene-C9F04_RS21405;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F04_RS21405;old_locus_tag=C9F04_22105
NZ_PYKF01000694.1	Protein Homology	CDS	19553	20632	.	-	0	ID=cds-WP_001147297.1;Parent=gene-C9F04_RS21405;Dbxref=Genbank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9F04_RS21405;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	20664	22079	.	-	.	ID=gene-C9F04_RS21410;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9F04_RS21410;old_locus_tag=C9F04_22110
NZ_PYKF01000694.1	Protein Homology	CDS	20664	22079	.	-	0	ID=cds-WP_000918353.1;Parent=gene-C9F04_RS21410;Dbxref=Genbank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9F04_RS21410;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11
NZ_PYKF01000694.1	RefSeq	gene	22144	22574	.	+	.	ID=gene-C9F04_RS21415;Name=C9F04_RS21415;end_range=22574,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21415;old_locus_tag=C9F04_22115;partial=true
NZ_PYKF01000694.1	Protein Homology	CDS	22144	22574	.	+	0	ID=cds-WP_186799070.1;Parent=gene-C9F04_RS21415;Dbxref=Genbank:WP_186799070.1;Name=WP_186799070.1;end_range=22574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9F04_RS21415;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_186799070.1;transl_table=11
##sequence-region NZ_PYKF01000107.1 1 9005
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000107.1	RefSeq	region	1	9005	.	+	.	ID=NZ_PYKF01000107.1:1..9005;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000107.1	RefSeq	gene	1	1796	.	-	.	ID=gene-C9F04_RS02040;Name=C9F04_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02040;old_locus_tag=C9F04_02125;partial=true;start_range=.,1
NZ_PYKF01000107.1	Protein Homology	CDS	1	1796	.	-	0	ID=cds-WP_146712222.1;Parent=gene-C9F04_RS02040;Dbxref=Genbank:WP_146712222.1;Name=WP_146712222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F04_RS02040;partial=true;product=ABC transporter permease;protein_id=WP_146712222.1;start_range=.,1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	1793	2479	.	-	.	ID=gene-C9F04_RS02045;Name=C9F04_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02045;old_locus_tag=C9F04_02130
NZ_PYKF01000107.1	Protein Homology	CDS	1793	2479	.	-	0	ID=cds-WP_001110598.1;Parent=gene-C9F04_RS02045;Dbxref=Genbank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9F04_RS02045;product=ABC transporter ATP-binding protein;protein_id=WP_001110598.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	2450	3064	.	+	.	ID=gene-C9F04_RS02050;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9F04_RS02050;old_locus_tag=C9F04_02135
NZ_PYKF01000107.1	Protein Homology	CDS	2450	3064	.	+	0	ID=cds-WP_001010576.1;Parent=gene-C9F04_RS02050;Dbxref=Genbank:WP_001010576.1;Name=WP_001010576.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9F04_RS02050;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010576.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	3219	3989	.	+	.	ID=gene-C9F04_RS02055;Name=C9F04_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02055;old_locus_tag=C9F04_02140
NZ_PYKF01000107.1	Protein Homology	CDS	3219	3989	.	+	0	ID=cds-WP_001172804.1;Parent=gene-C9F04_RS02055;Dbxref=Genbank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9F04_RS02055;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	4049	4903	.	+	.	ID=gene-C9F04_RS02060;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9F04_RS02060;old_locus_tag=C9F04_02145
NZ_PYKF01000107.1	Protein Homology	CDS	4049	4903	.	+	0	ID=cds-WP_135369148.1;Parent=gene-C9F04_RS02060;Dbxref=Genbank:WP_135369148.1;Name=WP_135369148.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9F04_RS02060;product=chaperedoxin;protein_id=WP_135369148.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	4989	5768	.	-	.	ID=gene-C9F04_RS02065;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9F04_RS02065;old_locus_tag=C9F04_02150
NZ_PYKF01000107.1	Protein Homology	CDS	4989	5768	.	-	0	ID=cds-WP_001002130.1;Parent=gene-C9F04_RS02065;Dbxref=Genbank:WP_001002130.1;Name=WP_001002130.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9F04_RS02065;product=iron export ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	5755	6432	.	-	.	ID=gene-C9F04_RS02070;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=C9F04_RS02070;old_locus_tag=C9F04_02155
NZ_PYKF01000107.1	Protein Homology	CDS	5755	6432	.	-	0	ID=cds-WP_080154150.1;Parent=gene-C9F04_RS02070;Dbxref=Genbank:WP_080154150.1;Name=WP_080154150.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9F04_RS02070;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_080154150.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	6579	7496	.	+	.	ID=gene-C9F04_RS02075;Name=C9F04_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02075;old_locus_tag=C9F04_02160
NZ_PYKF01000107.1	Protein Homology	CDS	6579	7496	.	+	0	ID=cds-WP_135494517.1;Parent=gene-C9F04_RS02075;Dbxref=Genbank:WP_135494517.1;Name=WP_135494517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9F04_RS02075;product=SPFH/Band 7/PHB domain protein;protein_id=WP_135494517.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	7493	7945	.	+	.	ID=gene-C9F04_RS02080;Name=C9F04_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02080;old_locus_tag=C9F04_02165
NZ_PYKF01000107.1	Protein Homology	CDS	7493	7945	.	+	0	ID=cds-WP_000561177.1;Parent=gene-C9F04_RS02080;Dbxref=Genbank:WP_000561177.1;Name=WP_000561177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9F04_RS02080;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	gene	7946	8362	.	-	.	ID=gene-C9F04_RS02085;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9F04_RS02085;old_locus_tag=C9F04_02170
NZ_PYKF01000107.1	Protein Homology	CDS	7946	8362	.	-	0	ID=cds-WP_001026760.1;Parent=gene-C9F04_RS02085;Dbxref=Genbank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9F04_RS02085;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11
NZ_PYKF01000107.1	RefSeq	pseudogene	8472	9005	.	+	.	ID=gene-C9F04_RS02090;Name=C9F04_RS02090;end_range=9005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02090;old_locus_tag=C9F04_02175;partial=true;pseudo=true
NZ_PYKF01000107.1	Protein Homology	CDS	8472	9005	.	+	0	ID=cds-C9F04_RS02090;Parent=gene-C9F04_RS02090;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=9005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308564.1;locus_tag=C9F04_RS02090;partial=true;product=cation transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000557.1 1 8926
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000557.1	RefSeq	region	1	8926	.	+	.	ID=NZ_PYKF01000557.1:1..8926;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000557.1	RefSeq	pseudogene	1	1851	.	+	.	ID=gene-C9F04_RS16650;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=C9F04_RS16650;old_locus_tag=C9F04_17165;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000557.1	Protein Homology	CDS	1	1851	.	+	0	ID=cds-C9F04_RS16650;Parent=gene-C9F04_RS16650;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F04_RS16650;partial=true;product=aconitate hydratase AcnA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	1907	2497	.	-	.	ID=gene-C9F04_RS16655;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9F04_RS16655;old_locus_tag=C9F04_17170
NZ_PYKF01000557.1	Protein Homology	CDS	1907	2497	.	-	0	ID=cds-WP_001176284.1;Parent=gene-C9F04_RS16655;Dbxref=Genbank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9F04_RS16655;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	2693	3457	.	+	.	ID=gene-C9F04_RS16660;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9F04_RS16660;old_locus_tag=C9F04_17175
NZ_PYKF01000557.1	Protein Homology	CDS	2693	3457	.	+	0	ID=cds-WP_000948636.1;Parent=gene-C9F04_RS16660;Dbxref=Genbank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9F04_RS16660;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	3607	3915	.	+	.	ID=gene-C9F04_RS16665;Name=C9F04_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16665;old_locus_tag=C9F04_17185
NZ_PYKF01000557.1	Protein Homology	CDS	3607	3915	.	+	0	ID=cds-WP_000876301.1;Parent=gene-C9F04_RS16665;Dbxref=Genbank:WP_000876301.1;Name=WP_000876301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9F04_RS16665;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	3922	5091	.	+	.	ID=gene-C9F04_RS16670;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9F04_RS16670;old_locus_tag=C9F04_17190
NZ_PYKF01000557.1	Protein Homology	CDS	3922	5091	.	+	0	ID=cds-WP_146712900.1;Parent=gene-C9F04_RS16670;Dbxref=Genbank:WP_146712900.1;Name=WP_146712900.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9F04_RS16670;product=lipopolysaccharide assembly protein LapB;protein_id=WP_146712900.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	5282	6019	.	+	.	ID=gene-C9F04_RS16675;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9F04_RS16675;old_locus_tag=C9F04_17200
NZ_PYKF01000557.1	Protein Homology	CDS	5282	6019	.	+	0	ID=cds-WP_001537903.1;Parent=gene-C9F04_RS16675;Dbxref=Genbank:WP_001537903.1;Name=WP_001537903.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9F04_RS16675;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001537903.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	6019	6345	.	+	.	ID=gene-C9F04_RS16680;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9F04_RS16680;old_locus_tag=C9F04_17205
NZ_PYKF01000557.1	Protein Homology	CDS	6019	6345	.	+	0	ID=cds-WP_001285199.1;Parent=gene-C9F04_RS16680;Dbxref=Genbank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9F04_RS16680;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	6465	6683	.	-	.	ID=gene-C9F04_RS16685;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9F04_RS16685;old_locus_tag=C9F04_17210
NZ_PYKF01000557.1	Protein Homology	CDS	6465	6683	.	-	0	ID=cds-WP_000481166.1;Parent=gene-C9F04_RS16685;Dbxref=Genbank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9F04_RS16685;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	6942	7694	.	-	.	ID=gene-C9F04_RS16690;Name=C9F04_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16690;old_locus_tag=C9F04_17215
NZ_PYKF01000557.1	Protein Homology	CDS	6942	7694	.	-	0	ID=cds-WP_001088594.1;Parent=gene-C9F04_RS16690;Dbxref=Genbank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9F04_RS16690;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	7781	7960	.	-	.	ID=gene-C9F04_RS16695;Name=C9F04_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16695;old_locus_tag=C9F04_17220
NZ_PYKF01000557.1	Protein Homology	CDS	7781	7960	.	-	0	ID=cds-WP_001279854.1;Parent=gene-C9F04_RS16695;Dbxref=Genbank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9F04_RS16695;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11
NZ_PYKF01000557.1	RefSeq	gene	8082	8926	.	-	.	ID=gene-C9F04_RS16700;Name=C9F04_RS16700;end_range=8926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16700;old_locus_tag=C9F04_17225;partial=true
NZ_PYKF01000557.1	Protein Homology	CDS	8082	8926	.	-	2	ID=cds-WP_146712901.1;Parent=gene-C9F04_RS16700;Dbxref=Genbank:WP_146712901.1;Name=WP_146712901.1;end_range=8926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F04_RS16700;partial=true;product=EAL domain-containing protein;protein_id=WP_146712901.1;transl_table=11
##sequence-region NZ_PYKF01000279.1 1 8924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000279.1	RefSeq	region	1	8924	.	+	.	ID=NZ_PYKF01000279.1:1..8924;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000279.1	RefSeq	pseudogene	1	153	.	-	.	ID=gene-C9F04_RS07800;Name=C9F04_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07800;old_locus_tag=C9F04_08070;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000279.1	Protein Homology	CDS	1	153	.	-	0	ID=cds-C9F04_RS07800;Parent=gene-C9F04_RS07800;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=C9F04_RS07800;partial=true;product=phage major capsid protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	168	818	.	-	.	ID=gene-C9F04_RS07805;Name=C9F04_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07805;old_locus_tag=C9F04_08075
NZ_PYKF01000279.1	Protein Homology	CDS	168	818	.	-	0	ID=cds-WP_001193639.1;Parent=gene-C9F04_RS07805;Dbxref=Genbank:WP_001193639.1;Name=WP_001193639.1;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=C9F04_RS07805;product=HK97 family phage prohead protease;protein_id=WP_001193639.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	796	2037	.	-	.	ID=gene-C9F04_RS07810;Name=C9F04_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07810;old_locus_tag=C9F04_08080
NZ_PYKF01000279.1	Protein Homology	CDS	796	2037	.	-	0	ID=cds-WP_135369397.1;Parent=gene-C9F04_RS07810;Dbxref=Genbank:WP_135369397.1;Name=WP_135369397.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=C9F04_RS07810;product=phage portal protein;protein_id=WP_135369397.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	2037	2219	.	-	.	ID=gene-C9F04_RS07815;Name=C9F04_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07815;old_locus_tag=C9F04_08085
NZ_PYKF01000279.1	Protein Homology	CDS	2037	2219	.	-	0	ID=cds-WP_000605609.1;Parent=gene-C9F04_RS07815;Dbxref=Genbank:WP_000605609.1;Name=WP_000605609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=C9F04_RS07815;product=hypothetical protein;protein_id=WP_000605609.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	2231	3964	.	-	.	ID=gene-C9F04_RS07820;Name=C9F04_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07820;old_locus_tag=C9F04_08090
NZ_PYKF01000279.1	Protein Homology	CDS	2231	3964	.	-	0	ID=cds-WP_146712487.1;Parent=gene-C9F04_RS07820;Dbxref=Genbank:WP_146712487.1;Name=WP_146712487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=C9F04_RS07820;product=terminase large subunit;protein_id=WP_146712487.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	3961	4455	.	-	.	ID=gene-C9F04_RS07825;Name=C9F04_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07825;old_locus_tag=C9F04_08095
NZ_PYKF01000279.1	Protein Homology	CDS	3961	4455	.	-	0	ID=cds-WP_000929191.1;Parent=gene-C9F04_RS07825;Dbxref=Genbank:WP_000929191.1;Name=WP_000929191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=C9F04_RS07825;product=phage terminase small subunit P27 family;protein_id=WP_000929191.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	4580	4930	.	-	.	ID=gene-C9F04_RS07830;Name=C9F04_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07830;old_locus_tag=C9F04_08100
NZ_PYKF01000279.1	Protein Homology	CDS	4580	4930	.	-	0	ID=cds-WP_079810073.1;Parent=gene-C9F04_RS07830;Dbxref=Genbank:WP_079810073.1;Name=WP_079810073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=C9F04_RS07830;product=HNH endonuclease;protein_id=WP_079810073.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	4977	5483	.	-	.	ID=gene-C9F04_RS07835;Name=C9F04_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07835;old_locus_tag=C9F04_08105
NZ_PYKF01000279.1	GeneMarkS-2+	CDS	4977	5483	.	-	0	ID=cds-WP_135369396.1;Parent=gene-C9F04_RS07835;Dbxref=Genbank:WP_135369396.1;Name=WP_135369396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS07835;product=hypothetical protein;protein_id=WP_135369396.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	5640	6074	.	-	.	ID=gene-C9F04_RS07840;Name=C9F04_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07840;old_locus_tag=C9F04_08110
NZ_PYKF01000279.1	Protein Homology	CDS	5640	6074	.	-	0	ID=cds-WP_079810071.1;Parent=gene-C9F04_RS07840;Dbxref=Genbank:WP_079810071.1;Name=WP_079810071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778467.1;locus_tag=C9F04_RS07840;product=DUF2570 domain-containing protein;protein_id=WP_079810071.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	6058	6534	.	-	.	ID=gene-C9F04_RS07845;Name=C9F04_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07845;old_locus_tag=C9F04_08115
NZ_PYKF01000279.1	Protein Homology	CDS	6058	6534	.	-	0	ID=cds-WP_079810070.1;Parent=gene-C9F04_RS07845;Dbxref=Genbank:WP_079810070.1;Name=WP_079810070.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159277.1;locus_tag=C9F04_RS07845;product=glycoside hydrolase family protein;protein_id=WP_079810070.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	6538	6873	.	-	.	ID=gene-C9F04_RS07850;Name=C9F04_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07850;old_locus_tag=C9F04_08120
NZ_PYKF01000279.1	Protein Homology	CDS	6538	6873	.	-	0	ID=cds-WP_023219695.1;Parent=gene-C9F04_RS07850;Dbxref=Genbank:WP_023219695.1;Name=WP_023219695.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120500.1;locus_tag=C9F04_RS07850;product=phage holin%2C lambda family;protein_id=WP_023219695.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	7170	8501	.	+	.	ID=gene-C9F04_RS07855;Name=C9F04_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07855;old_locus_tag=C9F04_08125
NZ_PYKF01000279.1	Protein Homology	CDS	7170	8501	.	+	0	ID=cds-WP_135420236.1;Parent=gene-C9F04_RS07855;Dbxref=Genbank:WP_135420236.1;Name=WP_135420236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=C9F04_RS07855;product=P-loop NTPase fold protein;protein_id=WP_135420236.1;transl_table=11
NZ_PYKF01000279.1	RefSeq	gene	8530	8898	.	-	.	ID=gene-C9F04_RS07860;Name=C9F04_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07860;old_locus_tag=C9F04_08130
NZ_PYKF01000279.1	Protein Homology	CDS	8530	8898	.	-	0	ID=cds-WP_146712488.1;Parent=gene-C9F04_RS07860;Dbxref=Genbank:WP_146712488.1;Name=WP_146712488.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=C9F04_RS07860;product=antiterminator Q family protein;protein_id=WP_146712488.1;transl_table=11
##sequence-region NZ_PYKF01000676.1 1 8908
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000676.1	RefSeq	region	1	8908	.	+	.	ID=NZ_PYKF01000676.1:1..8908;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000676.1	RefSeq	gene	1	265	.	-	.	ID=gene-C9F04_RS20740;Name=C9F04_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20740;old_locus_tag=C9F04_21410;partial=true;start_range=.,1
NZ_PYKF01000676.1	Protein Homology	CDS	1	265	.	-	0	ID=cds-WP_146713104.1;Parent=gene-C9F04_RS20740;Dbxref=Genbank:WP_146713104.1;Name=WP_146713104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9F04_RS20740;partial=true;product=DUF4310 family protein;protein_id=WP_146713104.1;start_range=.,1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	277	1053	.	-	.	ID=gene-C9F04_RS20745;Name=C9F04_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20745;old_locus_tag=C9F04_21415
NZ_PYKF01000676.1	Protein Homology	CDS	277	1053	.	-	0	ID=cds-WP_000478578.1;Parent=gene-C9F04_RS20745;Dbxref=Genbank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9F04_RS20745;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	1076	1378	.	-	.	ID=gene-C9F04_RS20750;Name=C9F04_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20750;old_locus_tag=C9F04_21420
NZ_PYKF01000676.1	Protein Homology	CDS	1076	1378	.	-	0	ID=cds-WP_000975187.1;Parent=gene-C9F04_RS20750;Dbxref=Genbank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9F04_RS20750;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	1378	1740	.	-	.	ID=gene-C9F04_RS20755;Name=C9F04_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20755;old_locus_tag=C9F04_21425
NZ_PYKF01000676.1	Protein Homology	CDS	1378	1740	.	-	0	ID=cds-WP_000435389.1;Parent=gene-C9F04_RS20755;Dbxref=Genbank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9F04_RS20755;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	1751	2089	.	-	.	ID=gene-C9F04_RS20760;Name=C9F04_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20760;old_locus_tag=C9F04_21430
NZ_PYKF01000676.1	Protein Homology	CDS	1751	2089	.	-	0	ID=cds-WP_001255104.1;Parent=gene-C9F04_RS20760;Dbxref=Genbank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9F04_RS20760;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	2367	2753	.	-	.	ID=gene-C9F04_RS20765;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9F04_RS20765;old_locus_tag=C9F04_21435
NZ_PYKF01000676.1	Protein Homology	CDS	2367	2753	.	-	0	ID=cds-WP_146713105.1;Parent=gene-C9F04_RS20765;Dbxref=Genbank:WP_146713105.1;Name=WP_146713105.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9F04_RS20765;product=cytochrome b562;protein_id=WP_146713105.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	pseudogene	2852	4204	.	-	.	ID=gene-C9F04_RS20770;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=pseudogene;locus_tag=C9F04_RS20770;old_locus_tag=C9F04_21440;pseudo=true
NZ_PYKF01000676.1	Protein Homology	CDS	2852	4204	.	-	0	ID=cds-C9F04_RS20770;Parent=gene-C9F04_RS20770;Note=internal stop;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9F04_RS20770;product=metalloprotease PmbA;pseudo=true;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	4300	4851	.	+	.	ID=gene-C9F04_RS20775;Name=C9F04_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20775;old_locus_tag=C9F04_21445
NZ_PYKF01000676.1	Protein Homology	CDS	4300	4851	.	+	0	ID=cds-WP_146713106.1;Parent=gene-C9F04_RS20775;Dbxref=Genbank:WP_146713106.1;Name=WP_146713106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9F04_RS20775;product=ribosome-associated protein;protein_id=WP_146713106.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	4907	5791	.	-	.	ID=gene-C9F04_RS20780;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=C9F04_RS20780;old_locus_tag=C9F04_21450
NZ_PYKF01000676.1	Protein Homology	CDS	4907	5791	.	-	0	ID=cds-WP_000683955.1;Parent=gene-C9F04_RS20780;Dbxref=Genbank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=C9F04_RS20780;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	5844	6659	.	-	.	ID=gene-C9F04_RS20785;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=C9F04_RS20785;old_locus_tag=C9F04_21455
NZ_PYKF01000676.1	Protein Homology	CDS	5844	6659	.	-	0	ID=cds-WP_001019386.1;Parent=gene-C9F04_RS20785;Dbxref=Genbank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=C9F04_RS20785;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	6820	8046	.	-	.	ID=gene-C9F04_RS20790;Name=C9F04_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20790;old_locus_tag=C9F04_21460
NZ_PYKF01000676.1	Protein Homology	CDS	6820	8046	.	-	0	ID=cds-WP_000661780.1;Parent=gene-C9F04_RS20790;Dbxref=Genbank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=C9F04_RS20790;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11
NZ_PYKF01000676.1	RefSeq	gene	8119	8908	.	-	.	ID=gene-C9F04_RS20795;Name=iolG2;end_range=8908,.;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=C9F04_RS20795;old_locus_tag=C9F04_21465;partial=true
NZ_PYKF01000676.1	Protein Homology	CDS	8119	8908	.	-	1	ID=cds-WP_146713107.1;Parent=gene-C9F04_RS20795;Dbxref=Genbank:WP_146713107.1;Name=WP_146713107.1;end_range=8908,.;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9F04_RS20795;partial=true;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_146713107.1;transl_table=11
##sequence-region NZ_PYKF01000641.1 1 8878
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000641.1	RefSeq	region	1	8878	.	+	.	ID=NZ_PYKF01000641.1:1..8878;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000641.1	RefSeq	gene	1	274	.	-	.	ID=gene-C9F04_RS19670;Name=C9F04_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19670;old_locus_tag=C9F04_20300;partial=true;start_range=.,1
NZ_PYKF01000641.1	Protein Homology	CDS	1	274	.	-	0	ID=cds-WP_146713053.1;Parent=gene-C9F04_RS19670;Dbxref=Genbank:WP_146713053.1;Name=WP_146713053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9F04_RS19670;partial=true;product=DsrE family protein;protein_id=WP_146713053.1;start_range=.,1;transl_table=11
NZ_PYKF01000641.1	RefSeq	gene	451	1875	.	+	.	ID=gene-C9F04_RS19675;Name=C9F04_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19675;old_locus_tag=C9F04_20305
NZ_PYKF01000641.1	Protein Homology	CDS	451	1875	.	+	0	ID=cds-WP_001116350.1;Parent=gene-C9F04_RS19675;Dbxref=Genbank:WP_001116350.1;Name=WP_001116350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9F04_RS19675;product=YchO/YchP family invasin;protein_id=WP_001116350.1;transl_table=11
NZ_PYKF01000641.1	RefSeq	gene	1876	2526	.	-	.	ID=gene-C9F04_RS19680;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9F04_RS19680;old_locus_tag=C9F04_20310
NZ_PYKF01000641.1	Protein Homology	CDS	1876	2526	.	-	0	ID=cds-WP_001064598.1;Parent=gene-C9F04_RS19680;Dbxref=Genbank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9F04_RS19680;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11
NZ_PYKF01000641.1	RefSeq	gene	2519	4315	.	-	.	ID=gene-C9F04_RS19685;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9F04_RS19685;old_locus_tag=C9F04_20315
NZ_PYKF01000641.1	Protein Homology	CDS	2519	4315	.	-	0	ID=cds-WP_000476244.1;Parent=gene-C9F04_RS19685;Dbxref=Genbank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;gene=narX;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9F04_RS19685;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11
NZ_PYKF01000641.1	RefSeq	gene	4656	6053	.	+	.	ID=gene-C9F04_RS19690;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=C9F04_RS19690;old_locus_tag=C9F04_20325
NZ_PYKF01000641.1	Protein Homology	CDS	4656	6053	.	+	0	ID=cds-WP_146713054.1;Parent=gene-C9F04_RS19690;Dbxref=Genbank:WP_146713054.1;Name=WP_146713054.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9F04_RS19690;product=nitrate transporter NarK;protein_id=WP_146713054.1;transl_table=11
NZ_PYKF01000641.1	RefSeq	gene	6441	8878	.	+	.	ID=gene-C9F04_RS19695;Name=C9F04_RS19695;end_range=8878,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19695;old_locus_tag=C9F04_20330;partial=true
NZ_PYKF01000641.1	Protein Homology	CDS	6441	8878	.	+	0	ID=cds-WP_146713055.1;Parent=gene-C9F04_RS19695;Dbxref=Genbank:WP_146713055.1;Name=WP_146713055.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;end_range=8878,.;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F04_RS19695;partial=true;product=nitrate reductase subunit alpha;protein_id=WP_146713055.1;transl_table=11
##sequence-region NZ_PYKF01000603.1 1 8790
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000603.1	RefSeq	region	1	8790	.	+	.	ID=NZ_PYKF01000603.1:1..8790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000603.1	RefSeq	pseudogene	1	161	.	+	.	ID=gene-C9F04_RS18015;Name=C9F04_RS18015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18015;old_locus_tag=C9F04_18585;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000603.1	Protein Homology	CDS	1	161	.	+	2	ID=cds-C9F04_RS18015;Parent=gene-C9F04_RS18015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F04_RS18015;partial=true;product=valyl-tRNA synthetase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	303	1490	.	-	.	ID=gene-C9F04_RS18020;Name=C9F04_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18020;old_locus_tag=C9F04_18590
NZ_PYKF01000603.1	Protein Homology	CDS	303	1490	.	-	0	ID=cds-WP_001066975.1;Parent=gene-C9F04_RS18020;Dbxref=Genbank:WP_001066975.1;Name=WP_001066975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9F04_RS18020;product=YjgN family protein;protein_id=WP_001066975.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	1685	2188	.	+	.	ID=gene-C9F04_RS18025;Name=C9F04_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18025;old_locus_tag=C9F04_18595
NZ_PYKF01000603.1	Protein Homology	CDS	1685	2188	.	+	0	ID=cds-WP_001519079.1;Parent=gene-C9F04_RS18025;Dbxref=Genbank:WP_001519079.1;Name=WP_001519079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9F04_RS18025;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	2295	2783	.	+	.	ID=gene-C9F04_RS18030;Name=C9F04_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18030;old_locus_tag=C9F04_18600
NZ_PYKF01000603.1	Protein Homology	CDS	2295	2783	.	+	0	ID=cds-WP_000826193.1;Parent=gene-C9F04_RS18030;Dbxref=Genbank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9F04_RS18030;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	3017	3829	.	-	.	ID=gene-C9F04_RS18035;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9F04_RS18035;old_locus_tag=C9F04_18605
NZ_PYKF01000603.1	Protein Homology	CDS	3017	3829	.	-	0	ID=cds-WP_000218459.1;Parent=gene-C9F04_RS18035;Dbxref=Genbank:WP_000218459.1;Name=WP_000218459.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9F04_RS18035;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218459.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	3841	4257	.	-	.	ID=gene-C9F04_RS18040;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9F04_RS18040;old_locus_tag=C9F04_18610
NZ_PYKF01000603.1	Protein Homology	CDS	3841	4257	.	-	0	ID=cds-WP_000002940.1;Parent=gene-C9F04_RS18040;Dbxref=Genbank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9F04_RS18040;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	4423	5427	.	+	.	ID=gene-C9F04_RS18045;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F04_RS18045;old_locus_tag=C9F04_18615
NZ_PYKF01000603.1	Protein Homology	CDS	4423	5427	.	+	0	ID=cds-WP_000103041.1;Parent=gene-C9F04_RS18045;Dbxref=Genbank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9F04_RS18045;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	5501	5953	.	-	.	ID=gene-C9F04_RS18050;Name=C9F04_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18050;old_locus_tag=C9F04_18620
NZ_PYKF01000603.1	Protein Homology	CDS	5501	5953	.	-	0	ID=cds-WP_000583455.1;Parent=gene-C9F04_RS18050;Dbxref=Genbank:WP_000583455.1;Name=WP_000583455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9F04_RS18050;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583455.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	6629	7849	.	+	.	ID=gene-C9F04_RS18055;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9F04_RS18055;old_locus_tag=C9F04_18635
NZ_PYKF01000603.1	Protein Homology	CDS	6629	7849	.	+	0	ID=cds-WP_000410846.1;Parent=gene-C9F04_RS18055;Dbxref=Genbank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9F04_RS18055;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11
NZ_PYKF01000603.1	RefSeq	gene	7860	8750	.	+	.	ID=gene-C9F04_RS18060;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9F04_RS18060;old_locus_tag=C9F04_18640
NZ_PYKF01000603.1	Protein Homology	CDS	7860	8750	.	+	0	ID=cds-WP_146712977.1;Parent=gene-C9F04_RS18060;Dbxref=Genbank:WP_146712977.1;Name=WP_146712977.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F04_RS18060;product=carbamate kinase;protein_id=WP_146712977.1;transl_table=11
##sequence-region NZ_PYKF01000255.1 1 8776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000255.1	RefSeq	region	1	8776	.	+	.	ID=NZ_PYKF01000255.1:1..8776;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000255.1	RefSeq	pseudogene	1	434	.	+	.	ID=gene-C9F04_RS07055;Name=C9F04_RS07055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07055;old_locus_tag=C9F04_07270;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000255.1	Protein Homology	CDS	1	434	.	+	2	ID=cds-C9F04_RS07055;Parent=gene-C9F04_RS07055;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F04_RS07055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	508	735	.	+	.	ID=gene-C9F04_RS07060;Name=C9F04_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07060;old_locus_tag=C9F04_07275
NZ_PYKF01000255.1	Protein Homology	CDS	508	735	.	+	0	ID=cds-WP_001217832.1;Parent=gene-C9F04_RS07060;Dbxref=Genbank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9F04_RS07060;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	736	1110	.	-	.	ID=gene-C9F04_RS07065;Name=C9F04_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07065;old_locus_tag=C9F04_07280
NZ_PYKF01000255.1	Protein Homology	CDS	736	1110	.	-	0	ID=cds-WP_135369043.1;Parent=gene-C9F04_RS07065;Dbxref=Genbank:WP_135369043.1;Name=WP_135369043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9F04_RS07065;product=MysB family protein;protein_id=WP_135369043.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	1192	2406	.	-	.	ID=gene-C9F04_RS07070;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9F04_RS07070;old_locus_tag=C9F04_07285
NZ_PYKF01000255.1	Protein Homology	CDS	1192	2406	.	-	0	ID=cds-WP_146712453.1;Parent=gene-C9F04_RS07070;Dbxref=Genbank:WP_146712453.1;Name=WP_146712453.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9F04_RS07070;product=multidrug efflux MFS transporter MdtG;protein_id=WP_146712453.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	2561	3481	.	-	.	ID=gene-C9F04_RS07075;Name=C9F04_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07075;old_locus_tag=C9F04_07295
NZ_PYKF01000255.1	Protein Homology	CDS	2561	3481	.	-	0	ID=cds-WP_000163977.1;Parent=gene-C9F04_RS07075;Dbxref=Genbank:WP_000163977.1;Name=WP_000163977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9F04_RS07075;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_000163977.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	3701	4753	.	+	.	ID=gene-C9F04_RS07080;Name=C9F04_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07080;old_locus_tag=C9F04_07300
NZ_PYKF01000255.1	Protein Homology	CDS	3701	4753	.	+	0	ID=cds-WP_135369042.1;Parent=gene-C9F04_RS07080;Dbxref=Genbank:WP_135369042.1;Name=WP_135369042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9F04_RS07080;product=rhodanese-related sulfurtransferase;protein_id=WP_135369042.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	4805	5380	.	-	.	ID=gene-C9F04_RS07085;Name=C9F04_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07085;old_locus_tag=C9F04_07305
NZ_PYKF01000255.1	Protein Homology	CDS	4805	5380	.	-	0	ID=cds-WP_076735729.1;Parent=gene-C9F04_RS07085;Dbxref=Genbank:WP_076735729.1;Name=WP_076735729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9F04_RS07085;product=YceI family protein;protein_id=WP_076735729.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	5377	5949	.	-	.	ID=gene-C9F04_RS07090;Name=C9F04_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07090;old_locus_tag=C9F04_07310
NZ_PYKF01000255.1	Protein Homology	CDS	5377	5949	.	-	0	ID=cds-WP_076735728.1;Parent=gene-C9F04_RS07090;Dbxref=Genbank:WP_076735728.1;Name=WP_076735728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9F04_RS07090;product=cytochrome b;protein_id=WP_076735728.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	6212	6325	.	-	.	ID=gene-C9F04_RS07095;Name=C9F04_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07095;old_locus_tag=C9F04_07320
NZ_PYKF01000255.1	Protein Homology	CDS	6212	6325	.	-	0	ID=cds-WP_001253282.1;Parent=gene-C9F04_RS07095;Dbxref=Genbank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9F04_RS07095;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	6366	7484	.	-	.	ID=gene-C9F04_RS07100;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9F04_RS07100;old_locus_tag=C9F04_07325
NZ_PYKF01000255.1	Protein Homology	CDS	6366	7484	.	-	0	ID=cds-WP_001524750.1;Parent=gene-C9F04_RS07100;Dbxref=Genbank:WP_001524750.1;Name=WP_001524750.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9F04_RS07100;product=N-methyl-L-tryptophan oxidase;protein_id=WP_001524750.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	7597	7851	.	-	.	ID=gene-C9F04_RS07105;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9F04_RS07105;old_locus_tag=C9F04_07330
NZ_PYKF01000255.1	Protein Homology	CDS	7597	7851	.	-	0	ID=cds-WP_000414441.1;Parent=gene-C9F04_RS07105;Dbxref=Genbank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9F04_RS07105;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	gene	8141	8386	.	-	.	ID=gene-C9F04_RS07110;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9F04_RS07110;old_locus_tag=C9F04_07335
NZ_PYKF01000255.1	Protein Homology	CDS	8141	8386	.	-	0	ID=cds-WP_001217763.1;Parent=gene-C9F04_RS07110;Dbxref=Genbank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9F04_RS07110;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11
NZ_PYKF01000255.1	RefSeq	pseudogene	8460	8776	.	-	.	ID=gene-C9F04_RS07115;Name=C9F04_RS07115;end_range=8776,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07115;old_locus_tag=C9F04_07340;partial=true;pseudo=true
NZ_PYKF01000255.1	Protein Homology	CDS	8460	8776	.	-	2	ID=cds-C9F04_RS07115;Parent=gene-C9F04_RS07115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9F04_RS07115;partial=true;product=dihydroorotase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000821.1 1 8694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000821.1	RefSeq	region	1	8694	.	+	.	ID=NZ_PYKF01000821.1:1..8694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000821.1	RefSeq	gene	1	976	.	-	.	ID=gene-C9F04_RS25815;Name=C9F04_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25815;old_locus_tag=C9F04_26705;partial=true;start_range=.,1
NZ_PYKF01000821.1	Protein Homology	CDS	1	976	.	-	0	ID=cds-WP_186799103.1;Parent=gene-C9F04_RS25815;Dbxref=Genbank:WP_186799103.1;Name=WP_186799103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F04_RS25815;partial=true;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_186799103.1;start_range=.,1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	1111	1605	.	-	.	ID=gene-C9F04_RS25820;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9F04_RS25820;old_locus_tag=C9F04_26710
NZ_PYKF01000821.1	Protein Homology	CDS	1111	1605	.	-	0	ID=cds-WP_000228469.1;Parent=gene-C9F04_RS25820;Dbxref=Genbank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9F04_RS25820;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	2152	3120	.	+	.	ID=gene-C9F04_RS25825;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9F04_RS25825;old_locus_tag=C9F04_26720
NZ_PYKF01000821.1	Protein Homology	CDS	2152	3120	.	+	0	ID=cds-WP_000537407.1;Parent=gene-C9F04_RS25825;Dbxref=Genbank:WP_000537407.1;Name=WP_000537407.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9F04_RS25825;product=thioredoxin-disulfide reductase;protein_id=WP_000537407.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	3234	5000	.	+	.	ID=gene-C9F04_RS25830;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9F04_RS25830;old_locus_tag=C9F04_26725
NZ_PYKF01000821.1	Protein Homology	CDS	3234	5000	.	+	0	ID=cds-WP_146713368.1;Parent=gene-C9F04_RS25830;Dbxref=Genbank:WP_146713368.1;Name=WP_146713368.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;gene=cydD;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9F04_RS25830;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_146713368.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	5001	6722	.	+	.	ID=gene-C9F04_RS25835;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9F04_RS25835;old_locus_tag=C9F04_26730
NZ_PYKF01000821.1	Protein Homology	CDS	5001	6722	.	+	0	ID=cds-WP_001202257.1;Parent=gene-C9F04_RS25835;Dbxref=Genbank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016021;gbkey=CDS;gene=cydC;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9F04_RS25835;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	6767	7471	.	+	.	ID=gene-C9F04_RS25840;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9F04_RS25840;old_locus_tag=C9F04_26735
NZ_PYKF01000821.1	Protein Homology	CDS	6767	7471	.	+	0	ID=cds-WP_023218059.1;Parent=gene-C9F04_RS25840;Dbxref=Genbank:WP_023218059.1;Name=WP_023218059.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9F04_RS25840;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_023218059.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	7472	7855	.	+	.	ID=gene-C9F04_RS25845;Name=C9F04_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25845;old_locus_tag=C9F04_26740
NZ_PYKF01000821.1	Protein Homology	CDS	7472	7855	.	+	0	ID=cds-WP_001539595.1;Parent=gene-C9F04_RS25845;Dbxref=Genbank:WP_001539595.1;Name=WP_001539595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=C9F04_RS25845;product=membrane protein;protein_id=WP_001539595.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	gene	7783	8001	.	+	.	ID=gene-C9F04_RS25850;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9F04_RS25850;old_locus_tag=C9F04_26745
NZ_PYKF01000821.1	Protein Homology	CDS	7783	8001	.	+	0	ID=cds-WP_001040187.1;Parent=gene-C9F04_RS25850;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9F04_RS25850;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_PYKF01000821.1	RefSeq	pseudogene	8092	8598	.	-	.	ID=gene-C9F04_RS25855;Name=C9F04_RS25855;end_range=8598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25855;old_locus_tag=C9F04_26750;partial=true;pseudo=true
NZ_PYKF01000821.1	Protein Homology	CDS	8092	8598	.	-	0	ID=cds-C9F04_RS25855;Parent=gene-C9F04_RS25855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9F04_RS25855;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000098.1 1 8598
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000098.1	RefSeq	region	1	8598	.	+	.	ID=NZ_PYKF01000098.1:1..8598;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000098.1	RefSeq	gene	1	837	.	+	.	ID=gene-C9F04_RS01855;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9F04_RS01855;old_locus_tag=C9F04_01940;partial=true;start_range=.,1
NZ_PYKF01000098.1	Protein Homology	CDS	1	837	.	+	0	ID=cds-WP_146712213.1;Parent=gene-C9F04_RS01855;Dbxref=Genbank:WP_146712213.1;Name=WP_146712213.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF007063.0;locus_tag=C9F04_RS01855;partial=true;product=transcriptional regulator LeuO;protein_id=WP_146712213.1;start_range=.,1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	1159	2883	.	+	.	ID=gene-C9F04_RS01860;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9F04_RS01860;old_locus_tag=C9F04_01945
NZ_PYKF01000098.1	Protein Homology	CDS	1159	2883	.	+	0	ID=cds-WP_000425619.1;Parent=gene-C9F04_RS01860;Dbxref=Genbank:WP_000425619.1;Name=WP_000425619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9F04_RS01860;product=acetolactate synthase 3 large subunit;protein_id=WP_000425619.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	2886	3377	.	+	.	ID=gene-C9F04_RS01865;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9F04_RS01865;old_locus_tag=C9F04_01950
NZ_PYKF01000098.1	Protein Homology	CDS	2886	3377	.	+	0	ID=cds-WP_001563086.1;Parent=gene-C9F04_RS01865;Dbxref=Genbank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9F04_RS01865;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	3661	4665	.	+	.	ID=gene-C9F04_RS01870;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9F04_RS01870;old_locus_tag=C9F04_01955
NZ_PYKF01000098.1	Protein Homology	CDS	3661	4665	.	+	0	ID=cds-WP_000762406.1;Parent=gene-C9F04_RS01870;Dbxref=Genbank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9F04_RS01870;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	5271	5729	.	+	.	ID=gene-C9F04_RS01875;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9F04_RS01875;old_locus_tag=C9F04_01960
NZ_PYKF01000098.1	Protein Homology	CDS	5271	5729	.	+	0	ID=cds-WP_135369127.1;Parent=gene-C9F04_RS01875;Dbxref=Genbank:WP_135369127.1;Name=WP_135369127.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9F04_RS01875;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_135369127.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	5731	6672	.	+	.	ID=gene-C9F04_RS01880;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9F04_RS01880;old_locus_tag=C9F04_01965
NZ_PYKF01000098.1	Protein Homology	CDS	5731	6672	.	+	0	ID=cds-WP_000970444.1;Parent=gene-C9F04_RS01880;Dbxref=Genbank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9F04_RS01880;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	6669	7034	.	+	.	ID=gene-C9F04_RS01885;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9F04_RS01885;old_locus_tag=C9F04_01970
NZ_PYKF01000098.1	Protein Homology	CDS	6669	7034	.	+	0	ID=cds-WP_000625651.1;Parent=gene-C9F04_RS01885;Dbxref=Genbank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9F04_RS01885;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11
NZ_PYKF01000098.1	RefSeq	gene	7050	8598	.	+	.	ID=gene-C9F04_RS01890;Name=ftsI;end_range=8598,.;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9F04_RS01890;old_locus_tag=C9F04_01975;partial=true
NZ_PYKF01000098.1	Protein Homology	CDS	7050	8598	.	+	0	ID=cds-WP_146712214.1;Parent=gene-C9F04_RS01890;Dbxref=Genbank:WP_146712214.1;Name=WP_146712214.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005887;end_range=8598,.;gbkey=CDS;gene=ftsI;go_component=integral component of plasma membrane|0005887||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F04_RS01890;partial=true;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_146712214.1;transl_table=11
##sequence-region NZ_PYKF01000024.1 1 8590
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000024.1	RefSeq	region	1	8590	.	+	.	ID=NZ_PYKF01000024.1:1..8590;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000024.1	RefSeq	gene	1	1197	.	+	.	ID=gene-C9F04_RS00320;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9F04_RS00320;old_locus_tag=C9F04_00345;partial=true;start_range=.,1
NZ_PYKF01000024.1	Protein Homology	CDS	1	1197	.	+	0	ID=cds-WP_146712139.1;Parent=gene-C9F04_RS00320;Dbxref=Genbank:WP_146712139.1;Name=WP_146712139.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9F04_RS00320;partial=true;product=tricarballylate/proton symporter TcuC;protein_id=WP_146712139.1;start_range=.,1;transl_table=11
NZ_PYKF01000024.1	RefSeq	gene	1246	1578	.	-	.	ID=gene-C9F04_RS00325;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9F04_RS00325;old_locus_tag=C9F04_00350
NZ_PYKF01000024.1	Protein Homology	CDS	1246	1578	.	-	0	ID=cds-WP_000722258.1;Parent=gene-C9F04_RS00325;Dbxref=Genbank:WP_000722258.1;Name=WP_000722258.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9F04_RS00325;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722258.1;transl_table=11
NZ_PYKF01000024.1	RefSeq	gene	1628	3034	.	-	.	ID=gene-C9F04_RS00330;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9F04_RS00330;old_locus_tag=C9F04_00355
NZ_PYKF01000024.1	Protein Homology	CDS	1628	3034	.	-	0	ID=cds-WP_001258803.1;Parent=gene-C9F04_RS00330;Dbxref=Genbank:WP_001258803.1;Name=WP_001258803.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9F04_RS00330;product=chitoporin;protein_id=WP_001258803.1;transl_table=11
NZ_PYKF01000024.1	RefSeq	gene	3486	5153	.	-	.	ID=gene-C9F04_RS00335;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9F04_RS00335;old_locus_tag=C9F04_00365
NZ_PYKF01000024.1	Protein Homology	CDS	3486	5153	.	-	0	ID=cds-WP_001287181.1;Parent=gene-C9F04_RS00335;Dbxref=Genbank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9F04_RS00335;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11
NZ_PYKF01000024.1	RefSeq	gene	5364	7316	.	-	.	ID=gene-C9F04_RS00340;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9F04_RS00340;old_locus_tag=C9F04_00370
NZ_PYKF01000024.1	Protein Homology	CDS	5364	7316	.	-	0	ID=cds-WP_146712140.1;Parent=gene-C9F04_RS00340;Dbxref=Genbank:WP_146712140.1;Name=WP_146712140.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016021;gbkey=CDS;gene=nagE;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9F04_RS00340;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_146712140.1;transl_table=11
NZ_PYKF01000024.1	RefSeq	gene	7643	8443	.	+	.	ID=gene-C9F04_RS00345;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9F04_RS00345;old_locus_tag=C9F04_00375
NZ_PYKF01000024.1	Protein Homology	CDS	7643	8443	.	+	0	ID=cds-WP_146712141.1;Parent=gene-C9F04_RS00345;Dbxref=Genbank:WP_146712141.1;Name=WP_146712141.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9F04_RS00345;product=glucosamine-6-phosphate deaminase;protein_id=WP_146712141.1;transl_table=11
##sequence-region NZ_PYKF01000450.1 1 22438
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000450.1	RefSeq	region	1	22438	.	+	.	ID=NZ_PYKF01000450.1:1..22438;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000450.1	RefSeq	gene	1	1032	.	+	.	ID=gene-C9F04_RS13445;Name=C9F04_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13445;old_locus_tag=C9F04_13880;partial=true;start_range=.,1
NZ_PYKF01000450.1	Protein Homology	CDS	1	1032	.	+	0	ID=cds-WP_146712752.1;Parent=gene-C9F04_RS13445;Dbxref=Genbank:WP_146712752.1;Name=WP_146712752.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9F04_RS13445;partial=true;product=ion channel protein;protein_id=WP_146712752.1;start_range=.,1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	1052	2704	.	-	.	ID=gene-C9F04_RS13450;Name=C9F04_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13450;old_locus_tag=C9F04_13885
NZ_PYKF01000450.1	Protein Homology	CDS	1052	2704	.	-	0	ID=cds-WP_135369208.1;Parent=gene-C9F04_RS13450;Dbxref=Genbank:WP_135369208.1;Name=WP_135369208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9F04_RS13450;product=alpha-keto acid decarboxylase family protein;protein_id=WP_135369208.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	2884	3882	.	+	.	ID=gene-C9F04_RS13455;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9F04_RS13455;old_locus_tag=C9F04_13895
NZ_PYKF01000450.1	Protein Homology	CDS	2884	3882	.	+	0	ID=cds-WP_135369209.1;Parent=gene-C9F04_RS13455;Dbxref=Genbank:WP_135369209.1;Name=WP_135369209.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9F04_RS13455;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_135369209.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	3996	4322	.	+	.	ID=gene-C9F04_RS13460;Name=C9F04_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13460;old_locus_tag=C9F04_13900
NZ_PYKF01000450.1	Protein Homology	CDS	3996	4322	.	+	0	ID=cds-WP_135369210.1;Parent=gene-C9F04_RS13460;Dbxref=Genbank:WP_135369210.1;Name=WP_135369210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9F04_RS13460;product=DUF2502 domain-containing protein;protein_id=WP_135369210.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	4383	5624	.	-	.	ID=gene-C9F04_RS13465;Name=C9F04_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13465;old_locus_tag=C9F04_13905
NZ_PYKF01000450.1	Protein Homology	CDS	4383	5624	.	-	0	ID=cds-WP_146712753.1;Parent=gene-C9F04_RS13465;Dbxref=Genbank:WP_146712753.1;Name=WP_146712753.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9F04_RS13465;product=Nramp family divalent metal transporter;protein_id=WP_146712753.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	5967	7169	.	+	.	ID=gene-C9F04_RS13470;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9F04_RS13470;old_locus_tag=C9F04_13910
NZ_PYKF01000450.1	Protein Homology	CDS	5967	7169	.	+	0	ID=cds-WP_000376347.1;Parent=gene-C9F04_RS13470;Dbxref=Genbank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9F04_RS13470;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	7222	9411	.	-	.	ID=gene-C9F04_RS13475;Name=C9F04_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13475;old_locus_tag=C9F04_13915
NZ_PYKF01000450.1	Protein Homology	CDS	7222	9411	.	-	0	ID=cds-WP_001112947.1;Parent=gene-C9F04_RS13475;Dbxref=Genbank:WP_001112947.1;Name=WP_001112947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9F04_RS13475;product=sensor domain-containing phosphodiesterase;protein_id=WP_001112947.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	9602	9677	.	-	.	ID=gene-C9F04_RS13480;Name=C9F04_RS13480;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS13480;old_locus_tag=C9F04_13920
NZ_PYKF01000450.1	tRNAscan-SE	tRNA	9602	9677	.	-	.	ID=rna-C9F04_RS13480;Parent=gene-C9F04_RS13480;anticodon=(pos:complement(9642..9644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13480;product=tRNA-Ala
NZ_PYKF01000450.1	tRNAscan-SE	exon	9602	9677	.	-	.	ID=exon-C9F04_RS13480-1;Parent=rna-C9F04_RS13480;anticodon=(pos:complement(9642..9644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13480;product=tRNA-Ala
NZ_PYKF01000450.1	RefSeq	gene	9720	9795	.	-	.	ID=gene-C9F04_RS13485;Name=C9F04_RS13485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS13485;old_locus_tag=C9F04_13925
NZ_PYKF01000450.1	tRNAscan-SE	tRNA	9720	9795	.	-	.	ID=rna-C9F04_RS13485;Parent=gene-C9F04_RS13485;anticodon=(pos:complement(9760..9762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13485;product=tRNA-Ala
NZ_PYKF01000450.1	tRNAscan-SE	exon	9720	9795	.	-	.	ID=exon-C9F04_RS13485-1;Parent=rna-C9F04_RS13485;anticodon=(pos:complement(9760..9762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13485;product=tRNA-Ala
NZ_PYKF01000450.1	RefSeq	gene	10017	10379	.	+	.	ID=gene-C9F04_RS13490;Name=C9F04_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13490;old_locus_tag=C9F04_13935
NZ_PYKF01000450.1	Protein Homology	CDS	10017	10379	.	+	0	ID=cds-WP_000472034.1;Parent=gene-C9F04_RS13490;Dbxref=Genbank:WP_000472034.1;Name=WP_000472034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9F04_RS13490;product=putative DNA-binding transcriptional regulator;protein_id=WP_000472034.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	10381	10773	.	+	.	ID=gene-C9F04_RS13495;Name=C9F04_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13495;old_locus_tag=C9F04_13940
NZ_PYKF01000450.1	Protein Homology	CDS	10381	10773	.	+	0	ID=cds-WP_000826515.1;Parent=gene-C9F04_RS13495;Dbxref=Genbank:WP_000826515.1;Name=WP_000826515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9F04_RS13495;product=putative DNA-binding transcriptional regulator;protein_id=WP_000826515.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	10827	12242	.	-	.	ID=gene-C9F04_RS13500;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9F04_RS13500;old_locus_tag=C9F04_13945
NZ_PYKF01000450.1	Protein Homology	CDS	10827	12242	.	-	0	ID=cds-WP_000695623.1;Parent=gene-C9F04_RS13500;Dbxref=Genbank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9F04_RS13500;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	12501	12576	.	+	.	ID=gene-C9F04_RS13505;Name=C9F04_RS13505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS13505;old_locus_tag=C9F04_13950
NZ_PYKF01000450.1	tRNAscan-SE	tRNA	12501	12576	.	+	.	ID=rna-C9F04_RS13505;Parent=gene-C9F04_RS13505;anticodon=(pos:12534..12536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13505;product=tRNA-Val
NZ_PYKF01000450.1	tRNAscan-SE	exon	12501	12576	.	+	.	ID=exon-C9F04_RS13505-1;Parent=rna-C9F04_RS13505;anticodon=(pos:12534..12536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13505;product=tRNA-Val
NZ_PYKF01000450.1	RefSeq	gene	12622	12697	.	+	.	ID=gene-C9F04_RS13510;Name=C9F04_RS13510;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS13510;old_locus_tag=C9F04_13955
NZ_PYKF01000450.1	tRNAscan-SE	tRNA	12622	12697	.	+	.	ID=rna-C9F04_RS13510;Parent=gene-C9F04_RS13510;anticodon=(pos:12655..12657);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13510;product=tRNA-Val
NZ_PYKF01000450.1	tRNAscan-SE	exon	12622	12697	.	+	.	ID=exon-C9F04_RS13510-1;Parent=rna-C9F04_RS13510;anticodon=(pos:12655..12657);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13510;product=tRNA-Val
NZ_PYKF01000450.1	RefSeq	gene	12701	12776	.	+	.	ID=gene-C9F04_RS13515;Name=C9F04_RS13515;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS13515;old_locus_tag=C9F04_13960
NZ_PYKF01000450.1	tRNAscan-SE	tRNA	12701	12776	.	+	.	ID=rna-C9F04_RS13515;Parent=gene-C9F04_RS13515;anticodon=(pos:12734..12736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13515;product=tRNA-Lys
NZ_PYKF01000450.1	tRNAscan-SE	exon	12701	12776	.	+	.	ID=exon-C9F04_RS13515-1;Parent=rna-C9F04_RS13515;anticodon=(pos:12734..12736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS13515;product=tRNA-Lys
NZ_PYKF01000450.1	RefSeq	gene	12799	12932	.	+	.	ID=gene-C9F04_RS13520;Name=C9F04_RS13520;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS13520;old_locus_tag=C9F04_13965
NZ_PYKF01000450.1	cmsearch	ncRNA	12799	12932	.	+	.	ID=rna-C9F04_RS13520;Parent=gene-C9F04_RS13520;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS13520;product=RtT sRNA
NZ_PYKF01000450.1	cmsearch	exon	12799	12932	.	+	.	ID=exon-C9F04_RS13520-1;Parent=rna-C9F04_RS13520;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS13520;product=RtT sRNA
NZ_PYKF01000450.1	RefSeq	gene	13124	14008	.	-	.	ID=gene-C9F04_RS13525;Name=C9F04_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13525;old_locus_tag=C9F04_13970
NZ_PYKF01000450.1	Protein Homology	CDS	13124	14008	.	-	0	ID=cds-WP_000438890.1;Parent=gene-C9F04_RS13525;Dbxref=Genbank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9F04_RS13525;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	14060	14218	.	-	.	ID=gene-C9F04_RS13530;Name=C9F04_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13530;old_locus_tag=C9F04_13975
NZ_PYKF01000450.1	Protein Homology	CDS	14060	14218	.	-	0	ID=cds-WP_000658727.1;Parent=gene-C9F04_RS13530;Dbxref=Genbank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9F04_RS13530;product=DUF1427 family protein;protein_id=WP_000658727.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	14277	15533	.	-	.	ID=gene-C9F04_RS13535;Name=C9F04_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13535;old_locus_tag=C9F04_13980
NZ_PYKF01000450.1	Protein Homology	CDS	14277	15533	.	-	0	ID=cds-WP_146712754.1;Parent=gene-C9F04_RS13535;Dbxref=Genbank:WP_146712754.1;Name=WP_146712754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9F04_RS13535;product=nucleoside permease;protein_id=WP_146712754.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	15588	16421	.	-	.	ID=gene-C9F04_RS13540;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9F04_RS13540;old_locus_tag=C9F04_13985
NZ_PYKF01000450.1	Protein Homology	CDS	15588	16421	.	-	0	ID=cds-WP_001119755.1;Parent=gene-C9F04_RS13540;Dbxref=Genbank:WP_001119755.1;Name=WP_001119755.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9F04_RS13540;product=xanthosine phosphorylase;protein_id=WP_001119755.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	16677	17438	.	+	.	ID=gene-C9F04_RS13545;Name=C9F04_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13545;old_locus_tag=C9F04_13990
NZ_PYKF01000450.1	Protein Homology	CDS	16677	17438	.	+	0	ID=cds-WP_000722930.1;Parent=gene-C9F04_RS13545;Dbxref=Genbank:WP_000722930.1;Name=WP_000722930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9F04_RS13545;product=membrane protein;protein_id=WP_000722930.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	17500	18426	.	-	.	ID=gene-C9F04_RS13550;Name=C9F04_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13550;old_locus_tag=C9F04_13995
NZ_PYKF01000450.1	Protein Homology	CDS	17500	18426	.	-	0	ID=cds-WP_001109835.1;Parent=gene-C9F04_RS13550;Dbxref=Genbank:WP_001109835.1;Name=WP_001109835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9F04_RS13550;product=LysR family transcriptional regulator;protein_id=WP_001109835.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	18516	19514	.	+	.	ID=gene-C9F04_RS13555;Name=C9F04_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13555;old_locus_tag=C9F04_14000
NZ_PYKF01000450.1	Protein Homology	CDS	18516	19514	.	+	0	ID=cds-WP_146712755.1;Parent=gene-C9F04_RS13555;Dbxref=Genbank:WP_146712755.1;Name=WP_146712755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9F04_RS13555;product=bile acid:sodium symporter;protein_id=WP_146712755.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	19511	19729	.	-	.	ID=gene-C9F04_RS13560;Name=C9F04_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13560;old_locus_tag=C9F04_14005
NZ_PYKF01000450.1	Protein Homology	CDS	19511	19729	.	-	0	ID=cds-WP_001519708.1;Parent=gene-C9F04_RS13560;Dbxref=Genbank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9F04_RS13560;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	19731	21746	.	-	.	ID=gene-C9F04_RS13565;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F04_RS13565;old_locus_tag=C9F04_14010
NZ_PYKF01000450.1	Protein Homology	CDS	19731	21746	.	-	0	ID=cds-WP_146712756.1;Parent=gene-C9F04_RS13565;Dbxref=Genbank:WP_146712756.1;Name=WP_146712756.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9F04_RS13565;product=NAD-dependent DNA ligase LigA;protein_id=WP_146712756.1;transl_table=11
NZ_PYKF01000450.1	RefSeq	gene	21818	22438	.	-	.	ID=gene-C9F04_RS13570;Name=zipA;end_range=22438,.;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9F04_RS13570;old_locus_tag=C9F04_14015;partial=true
NZ_PYKF01000450.1	Protein Homology	CDS	21818	22438	.	-	0	ID=cds-WP_146712757.1;Parent=gene-C9F04_RS13570;Dbxref=Genbank:WP_146712757.1;Name=WP_146712757.1;Ontology_term=GO:0000917,GO:0005515;end_range=22438,.;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9F04_RS13570;partial=true;product=cell division protein ZipA;protein_id=WP_146712757.1;transl_table=11
##sequence-region NZ_PYKF01000175.1 1 43249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000175.1	RefSeq	region	1	43249	.	+	.	ID=NZ_PYKF01000175.1:1..43249;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000175.1	RefSeq	pseudogene	1	604	.	-	.	ID=gene-C9F04_RS03830;Name=C9F04_RS03830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03830;old_locus_tag=C9F04_03955;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000175.1	Protein Homology	CDS	1	604	.	-	0	ID=cds-C9F04_RS03830;Parent=gene-C9F04_RS03830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9F04_RS03830;partial=true;product=2-keto-3-deoxygluconate permease 1;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	839	1201	.	-	.	ID=gene-C9F04_RS03835;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9F04_RS03835;old_locus_tag=C9F04_03960
NZ_PYKF01000175.1	Protein Homology	CDS	839	1201	.	-	0	ID=cds-WP_000384308.1;Parent=gene-C9F04_RS03835;Dbxref=Genbank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9F04_RS03835;product=protein YacL;protein_id=WP_000384308.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	1472	1795	.	+	.	ID=gene-C9F04_RS03840;Name=C9F04_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03840;old_locus_tag=C9F04_03965
NZ_PYKF01000175.1	Protein Homology	CDS	1472	1795	.	+	0	ID=cds-WP_001101536.1;Parent=gene-C9F04_RS03840;Dbxref=Genbank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9F04_RS03840;product=hypothetical protein;protein_id=WP_001101536.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	2213	2677	.	+	.	ID=gene-C9F04_RS03845;Name=C9F04_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03845;old_locus_tag=C9F04_03970
NZ_PYKF01000175.1	Protein Homology	CDS	2213	2677	.	+	0	ID=cds-WP_000110437.1;Parent=gene-C9F04_RS03845;Dbxref=Genbank:WP_000110437.1;Name=WP_000110437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9F04_RS03845;product=membrane protein;protein_id=WP_000110437.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	2717	5314	.	-	.	ID=gene-C9F04_RS03850;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9F04_RS03850;old_locus_tag=C9F04_03975
NZ_PYKF01000175.1	Protein Homology	CDS	2717	5314	.	-	0	ID=cds-WP_146712308.1;Parent=gene-C9F04_RS03850;Dbxref=Genbank:WP_146712308.1;Name=WP_146712308.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9F04_RS03850;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_146712308.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	5703	7328	.	+	.	ID=gene-C9F04_RS03855;Name=C9F04_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03855;old_locus_tag=C9F04_03985
NZ_PYKF01000175.1	Protein Homology	CDS	5703	7328	.	+	0	ID=cds-WP_064043215.1;Parent=gene-C9F04_RS03855;Dbxref=Genbank:WP_064043215.1;Name=WP_064043215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9F04_RS03855;product=DUF3300 domain-containing protein;protein_id=WP_064043215.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	7341	8132	.	+	.	ID=gene-C9F04_RS03860;Name=C9F04_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03860;old_locus_tag=C9F04_03990
NZ_PYKF01000175.1	Protein Homology	CDS	7341	8132	.	+	0	ID=cds-WP_146712309.1;Parent=gene-C9F04_RS03860;Dbxref=Genbank:WP_146712309.1;Name=WP_146712309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9F04_RS03860;product=DUF2950 family protein;protein_id=WP_146712309.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	8170	8454	.	-	.	ID=gene-C9F04_RS03865;Name=C9F04_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03865;old_locus_tag=C9F04_03995
NZ_PYKF01000175.1	Protein Homology	CDS	8170	8454	.	-	0	ID=cds-WP_135369121.1;Parent=gene-C9F04_RS03865;Dbxref=Genbank:WP_135369121.1;Name=WP_135369121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9F04_RS03865;product=hypothetical protein;protein_id=WP_135369121.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	8743	10167	.	-	.	ID=gene-C9F04_RS03870;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9F04_RS03870;old_locus_tag=C9F04_04000
NZ_PYKF01000175.1	Protein Homology	CDS	8743	10167	.	-	0	ID=cds-WP_001537804.1;Parent=gene-C9F04_RS03870;Dbxref=Genbank:WP_001537804.1;Name=WP_001537804.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F04_RS03870;product=dihydrolipoyl dehydrogenase;protein_id=WP_001537804.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	10369	12261	.	-	.	ID=gene-C9F04_RS03875;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9F04_RS03875;old_locus_tag=C9F04_04005
NZ_PYKF01000175.1	Protein Homology	CDS	10369	12261	.	-	0	ID=cds-WP_146712310.1;Parent=gene-C9F04_RS03875;Dbxref=Genbank:WP_146712310.1;Name=WP_146712310.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9F04_RS03875;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_146712310.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	12276	14939	.	-	.	ID=gene-C9F04_RS03880;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9F04_RS03880;old_locus_tag=C9F04_04010
NZ_PYKF01000175.1	Protein Homology	CDS	12276	14939	.	-	0	ID=cds-WP_146712311.1;Parent=gene-C9F04_RS03880;Dbxref=Genbank:WP_146712311.1;Name=WP_146712311.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9F04_RS03880;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_146712311.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	15246	16010	.	-	.	ID=gene-C9F04_RS03885;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9F04_RS03885;old_locus_tag=C9F04_04020
NZ_PYKF01000175.1	Protein Homology	CDS	15246	16010	.	-	0	ID=cds-WP_146712312.1;Parent=gene-C9F04_RS03885;Dbxref=Genbank:WP_146712312.1;Name=WP_146712312.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9F04_RS03885;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_146712312.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	16573	17946	.	+	.	ID=gene-C9F04_RS03890;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9F04_RS03890;old_locus_tag=C9F04_04025
NZ_PYKF01000175.1	Protein Homology	CDS	16573	17946	.	+	0	ID=cds-WP_000969487.1;Parent=gene-C9F04_RS03890;Dbxref=Genbank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9F04_RS03890;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	pseudogene	18110	19516	.	+	.	ID=gene-C9F04_RS03895;Name=C9F04_RS03895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03895;old_locus_tag=C9F04_04030;pseudo=true
NZ_PYKF01000175.1	Protein Homology	CDS	18110	19516	.	+	0	ID=cds-C9F04_RS03895;Parent=gene-C9F04_RS03895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9F04_RS03895;product=MFS transporter;pseudo=true;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	19516	20466	.	+	.	ID=gene-C9F04_RS03900;Name=C9F04_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03900;old_locus_tag=C9F04_04035
NZ_PYKF01000175.1	Protein Homology	CDS	19516	20466	.	+	0	ID=cds-WP_135369122.1;Parent=gene-C9F04_RS03900;Dbxref=Genbank:WP_135369122.1;Name=WP_135369122.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9F04_RS03900;product=family 43 glycosylhydrolase;protein_id=WP_135369122.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	20558	21412	.	-	.	ID=gene-C9F04_RS03905;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9F04_RS03905;old_locus_tag=C9F04_04040
NZ_PYKF01000175.1	Protein Homology	CDS	20558	21412	.	-	0	ID=cds-WP_000172039.1;Parent=gene-C9F04_RS03905;Dbxref=Genbank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9F04_RS03905;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	21409	21972	.	-	.	ID=gene-C9F04_RS03910;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9F04_RS03910;old_locus_tag=C9F04_04045
NZ_PYKF01000175.1	Protein Homology	CDS	21409	21972	.	-	0	ID=cds-WP_000936326.1;Parent=gene-C9F04_RS03910;Dbxref=Genbank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9F04_RS03910;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	22060	22953	.	+	.	ID=gene-C9F04_RS03915;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9F04_RS03915;old_locus_tag=C9F04_04050
NZ_PYKF01000175.1	Protein Homology	CDS	22060	22953	.	+	0	ID=cds-WP_001135135.1;Parent=gene-C9F04_RS03915;Dbxref=Genbank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9F04_RS03915;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	23175	23612	.	+	.	ID=gene-C9F04_RS03920;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9F04_RS03920;old_locus_tag=C9F04_04060
NZ_PYKF01000175.1	Protein Homology	CDS	23175	23612	.	+	0	ID=cds-WP_146712313.1;Parent=gene-C9F04_RS03920;Dbxref=Genbank:WP_146712313.1;Name=WP_146712313.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9F04_RS03920;product=prepilin peptidase-dependent pilin;protein_id=WP_146712313.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	23622	25007	.	+	.	ID=gene-C9F04_RS03925;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9F04_RS03925;old_locus_tag=C9F04_04065
NZ_PYKF01000175.1	Protein Homology	CDS	23622	25007	.	+	0	ID=cds-WP_146712314.1;Parent=gene-C9F04_RS03925;Dbxref=Genbank:WP_146712314.1;Name=WP_146712314.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9F04_RS03925;product=type II secretion system protein GspE;protein_id=WP_146712314.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	24997	26199	.	+	.	ID=gene-C9F04_RS03930;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9F04_RS03930;old_locus_tag=C9F04_04070
NZ_PYKF01000175.1	Protein Homology	CDS	24997	26199	.	+	0	ID=cds-WP_135369124.1;Parent=gene-C9F04_RS03930;Dbxref=Genbank:WP_135369124.1;Name=WP_135369124.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9F04_RS03930;product=protein transport protein HofC;protein_id=WP_135369124.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	26230	27273	.	-	.	ID=gene-C9F04_RS03935;Name=C9F04_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03935;old_locus_tag=C9F04_04075
NZ_PYKF01000175.1	Protein Homology	CDS	26230	27273	.	-	0	ID=cds-WP_001217365.1;Parent=gene-C9F04_RS03935;Dbxref=Genbank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459146.1;locus_tag=C9F04_RS03935;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	27499	28119	.	+	.	ID=gene-C9F04_RS03940;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9F04_RS03940;old_locus_tag=C9F04_04080
NZ_PYKF01000175.1	Protein Homology	CDS	27499	28119	.	+	0	ID=cds-WP_001270913.1;Parent=gene-C9F04_RS03940;Dbxref=Genbank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9F04_RS03940;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	28119	28862	.	+	.	ID=gene-C9F04_RS03945;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9F04_RS03945;old_locus_tag=C9F04_04085
NZ_PYKF01000175.1	Protein Homology	CDS	28119	28862	.	+	0	ID=cds-WP_000557441.1;Parent=gene-C9F04_RS03945;Dbxref=Genbank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9F04_RS03945;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	28872	29063	.	+	.	ID=gene-C9F04_RS03950;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9F04_RS03950;old_locus_tag=C9F04_04090
NZ_PYKF01000175.1	Protein Homology	CDS	28872	29063	.	+	0	ID=cds-WP_001286419.1;Parent=gene-C9F04_RS03950;Dbxref=Genbank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9F04_RS03950;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	29060	30001	.	-	.	ID=gene-C9F04_RS03955;Name=C9F04_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03955;old_locus_tag=C9F04_04095
NZ_PYKF01000175.1	Protein Homology	CDS	29060	30001	.	-	0	ID=cds-WP_135369125.1;Parent=gene-C9F04_RS03955;Dbxref=Genbank:WP_135369125.1;Name=WP_135369125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9F04_RS03955;product=LysR family transcriptional regulator;protein_id=WP_135369125.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	30087	31076	.	+	.	ID=gene-C9F04_RS03960;Name=C9F04_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03960;old_locus_tag=C9F04_04100
NZ_PYKF01000175.1	Protein Homology	CDS	30087	31076	.	+	0	ID=cds-WP_047607050.1;Parent=gene-C9F04_RS03960;Dbxref=Genbank:WP_047607050.1;Name=WP_047607050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9F04_RS03960;product=aldo/keto reductase;protein_id=WP_047607050.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	31110	31505	.	-	.	ID=gene-C9F04_RS03965;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9F04_RS03965;old_locus_tag=C9F04_04105
NZ_PYKF01000175.1	Protein Homology	CDS	31110	31505	.	-	0	ID=cds-WP_000736058.1;Parent=gene-C9F04_RS03965;Dbxref=Genbank:WP_000736058.1;Name=WP_000736058.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=C9F04_RS03965;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736058.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	31657	34362	.	-	.	ID=gene-C9F04_RS03970;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9F04_RS03970;old_locus_tag=C9F04_04110
NZ_PYKF01000175.1	Protein Homology	CDS	31657	34362	.	-	0	ID=cds-WP_000905756.1;Parent=gene-C9F04_RS03970;Dbxref=Genbank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9F04_RS03970;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	34424	34921	.	-	.	ID=gene-C9F04_RS03975;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9F04_RS03975;old_locus_tag=C9F04_04115
NZ_PYKF01000175.1	Protein Homology	CDS	34424	34921	.	-	0	ID=cds-WP_000014336.1;Parent=gene-C9F04_RS03975;Dbxref=Genbank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9F04_RS03975;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	35199	36116	.	-	.	ID=gene-C9F04_RS03980;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9F04_RS03980;old_locus_tag=C9F04_04120
NZ_PYKF01000175.1	Protein Homology	CDS	35199	36116	.	-	0	ID=cds-WP_000595487.1;Parent=gene-C9F04_RS03980;Dbxref=Genbank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9F04_RS03980;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	36217	37368	.	-	.	ID=gene-C9F04_RS03985;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9F04_RS03985;old_locus_tag=C9F04_04125
NZ_PYKF01000175.1	Protein Homology	CDS	36217	37368	.	-	0	ID=cds-WP_000462785.1;Parent=gene-C9F04_RS03985;Dbxref=Genbank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9F04_RS03985;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	37429	38691	.	-	.	ID=gene-C9F04_RS03990;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9F04_RS03990;old_locus_tag=C9F04_04130
NZ_PYKF01000175.1	Protein Homology	CDS	37429	38691	.	-	0	ID=cds-WP_000588463.1;Parent=gene-C9F04_RS03990;Dbxref=Genbank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9F04_RS03990;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	38688	39518	.	-	.	ID=gene-C9F04_RS03995;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9F04_RS03995;old_locus_tag=C9F04_04135
NZ_PYKF01000175.1	Protein Homology	CDS	38688	39518	.	-	0	ID=cds-WP_000075728.1;Parent=gene-C9F04_RS03995;Dbxref=Genbank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9F04_RS03995;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	39520	40440	.	-	.	ID=gene-C9F04_RS04000;Name=C9F04_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04000;old_locus_tag=C9F04_04140
NZ_PYKF01000175.1	Protein Homology	CDS	39520	40440	.	-	0	ID=cds-WP_000763906.1;Parent=gene-C9F04_RS04000;Dbxref=Genbank:WP_000763906.1;Name=WP_000763906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9F04_RS04000;product=D-alanine--D-alanine ligase;protein_id=WP_000763906.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	40433	41908	.	-	.	ID=gene-C9F04_RS04005;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9F04_RS04005;old_locus_tag=C9F04_04145
NZ_PYKF01000175.1	Protein Homology	CDS	40433	41908	.	-	0	ID=cds-WP_001096072.1;Parent=gene-C9F04_RS04005;Dbxref=Genbank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9F04_RS04005;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	gene	42027	43094	.	-	.	ID=gene-C9F04_RS04010;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9F04_RS04010;old_locus_tag=C9F04_04150
NZ_PYKF01000175.1	Protein Homology	CDS	42027	43094	.	-	0	ID=cds-WP_135369126.1;Parent=gene-C9F04_RS04010;Dbxref=Genbank:WP_135369126.1;Name=WP_135369126.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F04_RS04010;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_135369126.1;transl_table=11
NZ_PYKF01000175.1	RefSeq	pseudogene	43091	43225	.	-	.	ID=gene-C9F04_RS04015;Name=C9F04_RS04015;end_range=43225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04015;old_locus_tag=C9F04_04155;partial=true;pseudo=true
NZ_PYKF01000175.1	Protein Homology	CDS	43091	43225	.	-	0	ID=cds-C9F04_RS04015;Parent=gene-C9F04_RS04015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051301,GO:0016021;end_range=43225,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9F04_RS04015;partial=true;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000454.1 1 8579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000454.1	RefSeq	region	1	8579	.	+	.	ID=NZ_PYKF01000454.1:1..8579;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000454.1	RefSeq	gene	1	1405	.	+	.	ID=gene-C9F04_RS13650;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9F04_RS13650;old_locus_tag=C9F04_14095;partial=true;start_range=.,1
NZ_PYKF01000454.1	Protein Homology	CDS	1	1405	.	+	1	ID=cds-WP_146712766.1;Parent=gene-C9F04_RS13650;Dbxref=Genbank:WP_146712766.1;Name=WP_146712766.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232048.1;locus_tag=C9F04_RS13650;partial=true;product=two-partner secretion translocator ZirT;protein_id=WP_146712766.1;start_range=.,1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	1426	2262	.	+	.	ID=gene-C9F04_RS13655;Name=C9F04_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13655;old_locus_tag=C9F04_14100
NZ_PYKF01000454.1	Protein Homology	CDS	1426	2262	.	+	0	ID=cds-WP_001588353.1;Parent=gene-C9F04_RS13655;Dbxref=Genbank:WP_001588353.1;Name=WP_001588353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242932.1;locus_tag=C9F04_RS13655;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_001588353.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	2265	2783	.	+	.	ID=gene-C9F04_RS13660;Name=C9F04_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13660;old_locus_tag=C9F04_14105
NZ_PYKF01000454.1	Protein Homology	CDS	2265	2783	.	+	0	ID=cds-WP_135369381.1;Parent=gene-C9F04_RS13660;Dbxref=Genbank:WP_135369381.1;Name=WP_135369381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530156.1;locus_tag=C9F04_RS13660;product=peroxiredoxin;protein_id=WP_135369381.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	2890	3228	.	-	.	ID=gene-C9F04_RS13665;Name=C9F04_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13665;old_locus_tag=C9F04_14110
NZ_PYKF01000454.1	Protein Homology	CDS	2890	3228	.	-	0	ID=cds-WP_000051812.1;Parent=gene-C9F04_RS13665;Dbxref=Genbank:WP_000051812.1;Name=WP_000051812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9F04_RS13665;product=hypothetical protein;protein_id=WP_000051812.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	3256	3942	.	-	.	ID=gene-C9F04_RS13670;Name=C9F04_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13670;old_locus_tag=C9F04_14115
NZ_PYKF01000454.1	Protein Homology	CDS	3256	3942	.	-	0	ID=cds-WP_000097247.1;Parent=gene-C9F04_RS13670;Dbxref=Genbank:WP_000097247.1;Name=WP_000097247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9F04_RS13670;product=B3/4 domain-containing protein;protein_id=WP_000097247.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	3986	4588	.	+	.	ID=gene-C9F04_RS13675;Name=C9F04_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13675;old_locus_tag=C9F04_14120
NZ_PYKF01000454.1	Protein Homology	CDS	3986	4588	.	+	0	ID=cds-WP_000163371.1;Parent=gene-C9F04_RS13675;Dbxref=Genbank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9F04_RS13675;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	4670	5701	.	-	.	ID=gene-C9F04_RS13680;Name=C9F04_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13680;old_locus_tag=C9F04_14125
NZ_PYKF01000454.1	Protein Homology	CDS	4670	5701	.	-	0	ID=cds-WP_000493672.1;Parent=gene-C9F04_RS13680;Dbxref=Genbank:WP_000493672.1;Name=WP_000493672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9F04_RS13680;product=mechanosensitive ion channel family protein;protein_id=WP_000493672.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	5940	6194	.	+	.	ID=gene-C9F04_RS13685;Name=C9F04_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13685;old_locus_tag=C9F04_14130
NZ_PYKF01000454.1	Protein Homology	CDS	5940	6194	.	+	0	ID=cds-WP_000605645.1;Parent=gene-C9F04_RS13685;Dbxref=Genbank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9F04_RS13685;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	6249	7196	.	-	.	ID=gene-C9F04_RS13690;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9F04_RS13690;old_locus_tag=C9F04_14135
NZ_PYKF01000454.1	Protein Homology	CDS	6249	7196	.	-	0	ID=cds-WP_001262138.1;Parent=gene-C9F04_RS13690;Dbxref=Genbank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9F04_RS13690;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	7347	8099	.	-	.	ID=gene-C9F04_RS13695;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9F04_RS13695;old_locus_tag=C9F04_14140
NZ_PYKF01000454.1	Protein Homology	CDS	7347	8099	.	-	0	ID=cds-WP_000611914.1;Parent=gene-C9F04_RS13695;Dbxref=Genbank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9F04_RS13695;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11
NZ_PYKF01000454.1	RefSeq	gene	8295	8579	.	-	.	ID=gene-C9F04_RS13700;Name=C9F04_RS13700;end_range=8579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13700;old_locus_tag=C9F04_14145;partial=true
NZ_PYKF01000454.1	Protein Homology	CDS	8295	8579	.	-	0	ID=cds-WP_261771116.1;Parent=gene-C9F04_RS13700;Dbxref=Genbank:WP_261771116.1;Name=WP_261771116.1;Ontology_term=GO:0006281,GO:0003908;end_range=8579,.;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9F04_RS13700;partial=true;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_261771116.1;transl_table=11
##sequence-region NZ_PYKF01000187.1 1 8533
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000187.1	RefSeq	region	1	8533	.	+	.	ID=NZ_PYKF01000187.1:1..8533;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000187.1	RefSeq	gene	1	673	.	+	.	ID=gene-C9F04_RS04245;Name=C9F04_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04245;old_locus_tag=C9F04_04385;partial=true;start_range=.,1
NZ_PYKF01000187.1	Protein Homology	CDS	1	673	.	+	1	ID=cds-WP_186798995.1;Parent=gene-C9F04_RS04245;Dbxref=Genbank:WP_186798995.1;Name=WP_186798995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920362.1;locus_tag=C9F04_RS04245;partial=true;product=inner membrane CreD family protein;protein_id=WP_186798995.1;start_range=.,1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	731	1816	.	-	.	ID=gene-C9F04_RS04250;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9F04_RS04250;old_locus_tag=C9F04_04390
NZ_PYKF01000187.1	Protein Homology	CDS	731	1816	.	-	0	ID=cds-WP_135369561.1;Parent=gene-C9F04_RS04250;Dbxref=Genbank:WP_135369561.1;Name=WP_135369561.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9F04_RS04250;product=fimbrial major subunit SthE;protein_id=WP_135369561.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	1857	2414	.	-	.	ID=gene-C9F04_RS04255;Name=C9F04_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04255;old_locus_tag=C9F04_04395
NZ_PYKF01000187.1	Protein Homology	CDS	1857	2414	.	-	0	ID=cds-WP_001056984.1;Parent=gene-C9F04_RS04255;Dbxref=Genbank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9F04_RS04255;product=fimbrial protein SthD;protein_id=WP_001056984.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	2432	4969	.	-	.	ID=gene-C9F04_RS04260;Name=C9F04_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04260;old_locus_tag=C9F04_04400
NZ_PYKF01000187.1	Protein Homology	CDS	2432	4969	.	-	0	ID=cds-WP_001160707.1;Parent=gene-C9F04_RS04260;Dbxref=Genbank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F04_RS04260;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	5015	5698	.	-	.	ID=gene-C9F04_RS04265;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9F04_RS04265;old_locus_tag=C9F04_04405
NZ_PYKF01000187.1	Protein Homology	CDS	5015	5698	.	-	0	ID=cds-WP_000680523.1;Parent=gene-C9F04_RS04265;Dbxref=Genbank:WP_000680523.1;Name=WP_000680523.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9F04_RS04265;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680523.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	5769	6314	.	-	.	ID=gene-C9F04_RS04270;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9F04_RS04270;old_locus_tag=C9F04_04410
NZ_PYKF01000187.1	Protein Homology	CDS	5769	6314	.	-	0	ID=cds-WP_000482239.1;Parent=gene-C9F04_RS04270;Dbxref=Genbank:WP_000482239.1;Name=WP_000482239.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9F04_RS04270;product=fimbrial protein SthA;protein_id=WP_000482239.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	6653	7324	.	-	.	ID=gene-C9F04_RS04275;Name=C9F04_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04275;old_locus_tag=C9F04_04415
NZ_PYKF01000187.1	Protein Homology	CDS	6653	7324	.	-	0	ID=cds-WP_000811635.1;Parent=gene-C9F04_RS04275;Dbxref=Genbank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9F04_RS04275;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	7709	8023	.	-	.	ID=gene-C9F04_RS04280;Name=C9F04_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04280;old_locus_tag=C9F04_04420
NZ_PYKF01000187.1	Protein Homology	CDS	7709	8023	.	-	0	ID=cds-WP_135369339.1;Parent=gene-C9F04_RS04280;Dbxref=Genbank:WP_135369339.1;Name=WP_135369339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9F04_RS04280;product=hypothetical protein;protein_id=WP_135369339.1;transl_table=11
NZ_PYKF01000187.1	RefSeq	gene	8290	8533	.	-	.	ID=gene-C9F04_RS04285;Name=C9F04_RS04285;end_range=8533,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04285;old_locus_tag=C9F04_04425;partial=true
NZ_PYKF01000187.1	Protein Homology	CDS	8290	8533	.	-	1	ID=cds-WP_047642743.1;Parent=gene-C9F04_RS04285;Dbxref=Genbank:WP_047642743.1;Name=WP_047642743.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=8533,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9F04_RS04285;partial=true;product=winged helix-turn-helix domain-containing protein;protein_id=WP_047642743.1;transl_table=11
##sequence-region NZ_PYKF01000804.1 1 8446
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000804.1	RefSeq	region	1	8446	.	+	.	ID=NZ_PYKF01000804.1:1..8446;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000804.1	RefSeq	gene	162	1412	.	+	.	ID=gene-C9F04_RS25130;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9F04_RS25130;old_locus_tag=C9F04_25995
NZ_PYKF01000804.1	Protein Homology	CDS	162	1412	.	+	0	ID=cds-WP_000144381.1;Parent=gene-C9F04_RS25130;Dbxref=Genbank:WP_000144381.1;Name=WP_000144381.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9F04_RS25130;product=valine--pyruvate transaminase;protein_id=WP_000144381.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	1449	1922	.	-	.	ID=gene-C9F04_RS25135;Name=C9F04_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25135;old_locus_tag=C9F04_26000
NZ_PYKF01000804.1	Protein Homology	CDS	1449	1922	.	-	0	ID=cds-WP_001078812.1;Parent=gene-C9F04_RS25135;Dbxref=Genbank:WP_001078812.1;Name=WP_001078812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9F04_RS25135;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078812.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	2039	2845	.	-	.	ID=gene-C9F04_RS25140;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9F04_RS25140;old_locus_tag=C9F04_26005
NZ_PYKF01000804.1	Protein Homology	CDS	2039	2845	.	-	0	ID=cds-WP_001748894.1;Parent=gene-C9F04_RS25140;Dbxref=Genbank:WP_001748894.1;Name=WP_001748894.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9F04_RS25140;product=IclR family transcriptional regulator YiaJ;protein_id=WP_001748894.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	3075	4073	.	+	.	ID=gene-C9F04_RS25145;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9F04_RS25145;old_locus_tag=C9F04_26010
NZ_PYKF01000804.1	Protein Homology	CDS	3075	4073	.	+	0	ID=cds-WP_146713335.1;Parent=gene-C9F04_RS25145;Dbxref=Genbank:WP_146713335.1;Name=WP_146713335.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9F04_RS25145;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_146713335.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	4085	4549	.	+	.	ID=gene-C9F04_RS25150;Name=C9F04_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25150;old_locus_tag=C9F04_26015
NZ_PYKF01000804.1	Protein Homology	CDS	4085	4549	.	+	0	ID=cds-WP_000576102.1;Parent=gene-C9F04_RS25150;Dbxref=Genbank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9F04_RS25150;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	4573	5514	.	+	.	ID=gene-C9F04_RS25155;Name=C9F04_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25155;old_locus_tag=C9F04_26020
NZ_PYKF01000804.1	Protein Homology	CDS	4573	5514	.	+	0	ID=cds-WP_001748895.1;Parent=gene-C9F04_RS25155;Dbxref=Genbank:WP_001748895.1;Name=WP_001748895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466038.1;locus_tag=C9F04_RS25155;product=DUF4862 family protein;protein_id=WP_001748895.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	5643	6116	.	+	.	ID=gene-C9F04_RS25160;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9F04_RS25160;old_locus_tag=C9F04_26025
NZ_PYKF01000804.1	Protein Homology	CDS	5643	6116	.	+	0	ID=cds-WP_000832316.1;Parent=gene-C9F04_RS25160;Dbxref=Genbank:WP_000832316.1;Name=WP_000832316.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9F04_RS25160;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	6119	7396	.	+	.	ID=gene-C9F04_RS25165;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9F04_RS25165;old_locus_tag=C9F04_26030
NZ_PYKF01000804.1	Protein Homology	CDS	6119	7396	.	+	0	ID=cds-WP_146713336.1;Parent=gene-C9F04_RS25165;Dbxref=Genbank:WP_146713336.1;Name=WP_146713336.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9F04_RS25165;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WP_146713336.1;transl_table=11
NZ_PYKF01000804.1	RefSeq	gene	7408	8394	.	+	.	ID=gene-C9F04_RS25170;Name=C9F04_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25170;old_locus_tag=C9F04_26035
NZ_PYKF01000804.1	Protein Homology	CDS	7408	8394	.	+	0	ID=cds-WP_000766340.1;Parent=gene-C9F04_RS25170;Dbxref=Genbank:WP_000766340.1;Name=WP_000766340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9F04_RS25170;product=TRAP transporter substrate-binding protein;protein_id=WP_000766340.1;transl_table=11
##sequence-region NZ_PYKF01000132.1 1 8399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000132.1	RefSeq	region	1	8399	.	+	.	ID=NZ_PYKF01000132.1:1..8399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000132.1	RefSeq	pseudogene	1	391	.	+	.	ID=gene-C9F04_RS02645;Name=C9F04_RS02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02645;old_locus_tag=C9F04_02740;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000132.1	Protein Homology	CDS	1	391	.	+	1	ID=cds-C9F04_RS02645;Parent=gene-C9F04_RS02645;Note=YdeF%3B uncharacterized member of the major facilitator superfamily (MFS) of transporters%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9F04_RS02645;partial=true;product=efflux MFS transporter YdeE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	639	734	.	+	.	ID=gene-C9F04_RS02650;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9F04_RS02650;old_locus_tag=C9F04_02745
NZ_PYKF01000132.1	Protein Homology	CDS	639	734	.	+	0	ID=cds-WP_000901531.1;Parent=gene-C9F04_RS02650;Dbxref=Genbank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9F04_RS02650;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	1082	1474	.	-	.	ID=gene-C9F04_RS02655;Name=C9F04_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02655;old_locus_tag=C9F04_02750
NZ_PYKF01000132.1	Protein Homology	CDS	1082	1474	.	-	0	ID=cds-WP_000776351.1;Parent=gene-C9F04_RS02655;Dbxref=Genbank:WP_000776351.1;Name=WP_000776351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9F04_RS02655;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776351.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	1900	2427	.	+	.	ID=gene-C9F04_RS02660;Name=C9F04_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02660;old_locus_tag=C9F04_02755
NZ_PYKF01000132.1	Protein Homology	CDS	1900	2427	.	+	0	ID=cds-WP_001235357.1;Parent=gene-C9F04_RS02660;Dbxref=Genbank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9F04_RS02660;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	2547	2729	.	-	.	ID=gene-C9F04_RS02665;Name=C9F04_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02665;old_locus_tag=C9F04_02760
NZ_PYKF01000132.1	Protein Homology	CDS	2547	2729	.	-	0	ID=cds-WP_000807642.1;Parent=gene-C9F04_RS02665;Dbxref=Genbank:WP_000807642.1;Name=WP_000807642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9F04_RS02665;product=general stress protein;protein_id=WP_000807642.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	3074	5116	.	-	.	ID=gene-C9F04_RS02675;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9F04_RS02675;old_locus_tag=C9F04_02770
NZ_PYKF01000132.1	Protein Homology	CDS	3074	5116	.	-	0	ID=cds-WP_146712255.1;Parent=gene-C9F04_RS02675;Dbxref=Genbank:WP_146712255.1;Name=WP_146712255.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9F04_RS02675;product=peptidyl-dipeptidase Dcp;protein_id=WP_146712255.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	5255	6001	.	+	.	ID=gene-C9F04_RS02680;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9F04_RS02680;old_locus_tag=C9F04_02775
NZ_PYKF01000132.1	Protein Homology	CDS	5255	6001	.	+	0	ID=cds-WP_135369111.1;Parent=gene-C9F04_RS02680;Dbxref=Genbank:WP_135369111.1;Name=WP_135369111.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9F04_RS02680;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_135369111.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	6131	6817	.	+	.	ID=gene-C9F04_RS02685;Name=C9F04_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02685;old_locus_tag=C9F04_02780
NZ_PYKF01000132.1	Protein Homology	CDS	6131	6817	.	+	0	ID=cds-WP_000215563.1;Parent=gene-C9F04_RS02685;Dbxref=Genbank:WP_000215563.1;Name=WP_000215563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9F04_RS02685;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	6998	7201	.	+	.	ID=gene-C9F04_RS02690;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9F04_RS02690;old_locus_tag=C9F04_02785
NZ_PYKF01000132.1	Protein Homology	CDS	6998	7201	.	+	0	ID=cds-WP_000989267.1;Parent=gene-C9F04_RS02690;Dbxref=Genbank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9F04_RS02690;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11
NZ_PYKF01000132.1	RefSeq	gene	7268	8399	.	-	.	ID=gene-C9F04_RS02695;Name=C9F04_RS02695;end_range=8399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02695;old_locus_tag=C9F04_02790;partial=true
NZ_PYKF01000132.1	Protein Homology	CDS	7268	8399	.	-	1	ID=cds-WP_146712256.1;Parent=gene-C9F04_RS02695;Dbxref=Genbank:WP_146712256.1;Name=WP_146712256.1;end_range=8399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9F04_RS02695;partial=true;product=mannitol dehydrogenase family protein;protein_id=WP_146712256.1;transl_table=11
##sequence-region NZ_PYKF01000770.1 1 8390
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000770.1	RefSeq	region	1	8390	.	+	.	ID=NZ_PYKF01000770.1:1..8390;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000770.1	RefSeq	gene	120	1028	.	+	.	ID=gene-C9F04_RS23890;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9F04_RS23890;old_locus_tag=C9F04_24700
NZ_PYKF01000770.1	Protein Homology	CDS	120	1028	.	+	0	ID=cds-WP_000457024.1;Parent=gene-C9F04_RS23890;Dbxref=Genbank:WP_000457024.1;Name=WP_000457024.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9F04_RS23890;product=lipid A hydroxylase LpxO;protein_id=WP_000457024.1;transl_table=11
NZ_PYKF01000770.1	RefSeq	gene	1383	3530	.	+	.	ID=gene-C9F04_RS23895;Name=C9F04_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23895;old_locus_tag=C9F04_24705
NZ_PYKF01000770.1	Protein Homology	CDS	1383	3530	.	+	0	ID=cds-WP_011233236.1;Parent=gene-C9F04_RS23895;Dbxref=Genbank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9F04_RS23895;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:1800..1802%2Caa:Sec);transl_table=11
NZ_PYKF01000770.1	RefSeq	gene	3707	4396	.	+	.	ID=gene-C9F04_RS23900;Name=C9F04_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23900;old_locus_tag=C9F04_24710
NZ_PYKF01000770.1	Protein Homology	CDS	3707	4396	.	+	0	ID=cds-WP_000771454.1;Parent=gene-C9F04_RS23900;Dbxref=Genbank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9F04_RS23900;product=sel1 repeat family protein;protein_id=WP_000771454.1;transl_table=11
NZ_PYKF01000770.1	RefSeq	gene	4554	5864	.	-	.	ID=gene-C9F04_RS23905;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9F04_RS23905;old_locus_tag=C9F04_24715
NZ_PYKF01000770.1	Protein Homology	CDS	4554	5864	.	-	0	ID=cds-WP_000793278.1;Parent=gene-C9F04_RS23905;Dbxref=Genbank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016021;gbkey=CDS;gene=gltP;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9F04_RS23905;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11
NZ_PYKF01000770.1	RefSeq	gene	6209	6829	.	-	.	ID=gene-C9F04_RS23910;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9F04_RS23910;old_locus_tag=C9F04_24720
NZ_PYKF01000770.1	Protein Homology	CDS	6209	6829	.	-	0	ID=cds-WP_023260312.1;Parent=gene-C9F04_RS23910;Dbxref=Genbank:WP_023260312.1;Name=WP_023260312.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9F04_RS23910;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_023260312.1;transl_table=11
NZ_PYKF01000770.1	RefSeq	gene	6826	8390	.	-	.	ID=gene-C9F04_RS23915;Name=nrfEF;end_range=8390,.;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=C9F04_RS23915;old_locus_tag=C9F04_24725;partial=true
NZ_PYKF01000770.1	Protein Homology	CDS	6826	8390	.	-	2	ID=cds-WP_146713272.1;Parent=gene-C9F04_RS23915;Dbxref=Genbank:WP_146713272.1;Name=WP_146713272.1;end_range=8390,.;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F04_RS23915;partial=true;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_146713272.1;transl_table=11
##sequence-region NZ_PYKF01000440.1 1 8341
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000440.1	RefSeq	region	1	8341	.	+	.	ID=NZ_PYKF01000440.1:1..8341;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000440.1	RefSeq	pseudogene	1	617	.	-	.	ID=gene-C9F04_RS13205;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;gene_synonym=citA;locus_tag=C9F04_RS13205;old_locus_tag=C9F04_13635;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000440.1	Protein Homology	CDS	1	617	.	-	0	ID=cds-C9F04_RS13205;Parent=gene-C9F04_RS13205;Note=regulates the expression of citrate fermentation genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9F04_RS13205;partial=true;product=sensor histidine kinase DpiB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	1002	2078	.	+	.	ID=gene-C9F04_RS13210;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F04_RS13210;old_locus_tag=C9F04_13645
NZ_PYKF01000440.1	Protein Homology	CDS	1002	2078	.	+	0	ID=cds-WP_146712738.1;Parent=gene-C9F04_RS13210;Dbxref=Genbank:WP_146712738.1;Name=WP_146712738.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9F04_RS13210;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_146712738.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	2075	2371	.	+	.	ID=gene-C9F04_RS13215;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F04_RS13215;old_locus_tag=C9F04_13650
NZ_PYKF01000440.1	Protein Homology	CDS	2075	2371	.	+	0	ID=cds-WP_000700679.1;Parent=gene-C9F04_RS13215;Dbxref=Genbank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9F04_RS13215;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	2368	3276	.	+	.	ID=gene-C9F04_RS13220;Name=C9F04_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13220;old_locus_tag=C9F04_13655
NZ_PYKF01000440.1	Protein Homology	CDS	2368	3276	.	+	0	ID=cds-WP_146712739.1;Parent=gene-C9F04_RS13220;Dbxref=Genbank:WP_146712739.1;Name=WP_146712739.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9F04_RS13220;product=aldolase/citrate lyase family protein;protein_id=WP_146712739.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	3286	4815	.	+	.	ID=gene-C9F04_RS13225;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9F04_RS13225;old_locus_tag=C9F04_13660
NZ_PYKF01000440.1	Protein Homology	CDS	3286	4815	.	+	0	ID=cds-WP_052932426.1;Parent=gene-C9F04_RS13225;Dbxref=Genbank:WP_052932426.1;Name=WP_052932426.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9F04_RS13225;product=citrate lyase subunit alpha;protein_id=WP_052932426.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	4819	5370	.	+	.	ID=gene-C9F04_RS13230;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F04_RS13230;old_locus_tag=C9F04_13665
NZ_PYKF01000440.1	Protein Homology	CDS	4819	5370	.	+	0	ID=cds-WP_135369418.1;Parent=gene-C9F04_RS13230;Dbxref=Genbank:WP_135369418.1;Name=WP_135369418.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9F04_RS13230;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369418.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	5342	6238	.	+	.	ID=gene-C9F04_RS13235;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9F04_RS13235;old_locus_tag=C9F04_13670
NZ_PYKF01000440.1	Protein Homology	CDS	5342	6238	.	+	0	ID=cds-WP_000982655.1;Parent=gene-C9F04_RS13235;Dbxref=Genbank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9F04_RS13235;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	gene	6276	7739	.	+	.	ID=gene-C9F04_RS13240;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9F04_RS13240;old_locus_tag=C9F04_13675
NZ_PYKF01000440.1	Protein Homology	CDS	6276	7739	.	+	0	ID=cds-WP_000059029.1;Parent=gene-C9F04_RS13240;Dbxref=Genbank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9F04_RS13240;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11
NZ_PYKF01000440.1	RefSeq	pseudogene	7849	8341	.	+	.	ID=gene-C9F04_RS13245;Name=C9F04_RS13245;end_range=8341,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13245;old_locus_tag=C9F04_13680;partial=true;pseudo=true
NZ_PYKF01000440.1	Protein Homology	CDS	7849	8341	.	+	0	ID=cds-C9F04_RS13245;Parent=gene-C9F04_RS13245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8341,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9F04_RS13245;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000582.1 1 8338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000582.1	RefSeq	region	1	8338	.	+	.	ID=NZ_PYKF01000582.1:1..8338;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000582.1	RefSeq	gene	1	301	.	-	.	ID=gene-C9F04_RS17320;Name=C9F04_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17320;old_locus_tag=C9F04_17880;partial=true;start_range=.,1
NZ_PYKF01000582.1	Protein Homology	CDS	1	301	.	-	0	ID=cds-WP_146712937.1;Parent=gene-C9F04_RS17320;Dbxref=Genbank:WP_146712937.1;Name=WP_146712937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9F04_RS17320;partial=true;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_146712937.1;start_range=.,1;transl_table=11
NZ_PYKF01000582.1	RefSeq	gene	618	1832	.	+	.	ID=gene-C9F04_RS17330;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9F04_RS17330;old_locus_tag=C9F04_17890
NZ_PYKF01000582.1	Protein Homology	CDS	618	1832	.	+	0	ID=cds-WP_000544848.1;Parent=gene-C9F04_RS17330;Dbxref=Genbank:WP_000544848.1;Name=WP_000544848.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9F04_RS17330;product=diaminopropionate ammonia-lyase;protein_id=WP_000544848.1;transl_table=11
NZ_PYKF01000582.1	RefSeq	gene	2078	3511	.	+	.	ID=gene-C9F04_RS17335;Name=C9F04_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17335;old_locus_tag=C9F04_17895
NZ_PYKF01000582.1	Protein Homology	CDS	2078	3511	.	+	0	ID=cds-WP_000893197.1;Parent=gene-C9F04_RS17335;Dbxref=Genbank:WP_000893197.1;Name=WP_000893197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=C9F04_RS17335;product=sodium:alanine symporter family protein;protein_id=WP_000893197.1;transl_table=11
NZ_PYKF01000582.1	RefSeq	gene	3592	4794	.	-	.	ID=gene-C9F04_RS17340;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9F04_RS17340;old_locus_tag=C9F04_17900
NZ_PYKF01000582.1	Protein Homology	CDS	3592	4794	.	-	0	ID=cds-WP_000191404.1;Parent=gene-C9F04_RS17340;Dbxref=Genbank:WP_000191404.1;Name=WP_000191404.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9F04_RS17340;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191404.1;transl_table=11
NZ_PYKF01000582.1	RefSeq	gene	5061	7673	.	+	.	ID=gene-C9F04_RS17345;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9F04_RS17345;old_locus_tag=C9F04_17905
NZ_PYKF01000582.1	Protein Homology	CDS	5061	7673	.	+	0	ID=cds-WP_146712938.1;Parent=gene-C9F04_RS17345;Dbxref=Genbank:WP_146712938.1;Name=WP_146712938.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F04_RS17345;product=aminopeptidase N;protein_id=WP_146712938.1;transl_table=11
NZ_PYKF01000582.1	RefSeq	gene	7881	8338	.	+	.	ID=gene-C9F04_RS17350;Name=pyrD;end_range=8338,.;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9F04_RS17350;old_locus_tag=C9F04_17910;partial=true
NZ_PYKF01000582.1	Protein Homology	CDS	7881	8338	.	+	0	ID=cds-WP_146712939.1;Parent=gene-C9F04_RS17350;Dbxref=Genbank:WP_146712939.1;Name=WP_146712939.1;Ontology_term=GO:0009220,GO:0004152;end_range=8338,.;gbkey=CDS;gene=pyrD;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F04_RS17350;partial=true;product=dihydroorotate dehydrogenase (quinone);protein_id=WP_146712939.1;transl_table=11
##sequence-region NZ_PYKF01000199.1 1 8320
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000199.1	RefSeq	region	1	8320	.	+	.	ID=NZ_PYKF01000199.1:1..8320;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000199.1	RefSeq	gene	1	295	.	-	.	ID=gene-C9F04_RS04670;Name=C9F04_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04670;old_locus_tag=C9F04_04825;partial=true;start_range=.,1
NZ_PYKF01000199.1	Protein Homology	CDS	1	295	.	-	0	ID=cds-WP_186798997.1;Parent=gene-C9F04_RS04670;Dbxref=Genbank:WP_186798997.1;Name=WP_186798997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417855.4;locus_tag=C9F04_RS04670;partial=true;product=transglycosylase domain-containing protein;protein_id=WP_186798997.1;start_range=.,1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	416	1195	.	+	.	ID=gene-C9F04_RS04675;Name=C9F04_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04675;old_locus_tag=C9F04_04830
NZ_PYKF01000199.1	Protein Homology	CDS	416	1195	.	+	0	ID=cds-WP_135369361.1;Parent=gene-C9F04_RS04675;Dbxref=Genbank:WP_135369361.1;Name=WP_135369361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9F04_RS04675;product=DNA utilization protein HofM;protein_id=WP_135369361.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	1195	1734	.	+	.	ID=gene-C9F04_RS04680;Name=C9F04_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04680;old_locus_tag=C9F04_04835
NZ_PYKF01000199.1	Protein Homology	CDS	1195	1734	.	+	0	ID=cds-WP_146712350.1;Parent=gene-C9F04_RS04680;Dbxref=Genbank:WP_146712350.1;Name=WP_146712350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9F04_RS04680;product=PilN domain-containing protein;protein_id=WP_146712350.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	1718	2191	.	+	.	ID=gene-C9F04_RS04685;Name=C9F04_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04685;old_locus_tag=C9F04_04840
NZ_PYKF01000199.1	Protein Homology	CDS	1718	2191	.	+	0	ID=cds-WP_146712351.1;Parent=gene-C9F04_RS04685;Dbxref=Genbank:WP_146712351.1;Name=WP_146712351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9F04_RS04685;product=hypothetical protein;protein_id=WP_146712351.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	2181	2582	.	+	.	ID=gene-C9F04_RS04690;Name=C9F04_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04690;old_locus_tag=C9F04_04845
NZ_PYKF01000199.1	Protein Homology	CDS	2181	2582	.	+	0	ID=cds-WP_000648140.1;Parent=gene-C9F04_RS04690;Dbxref=Genbank:WP_000648140.1;Name=WP_000648140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9F04_RS04690;product=HofP DNA utilization family protein;protein_id=WP_000648140.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	2497	3735	.	+	.	ID=gene-C9F04_RS04695;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9F04_RS04695;old_locus_tag=C9F04_04850
NZ_PYKF01000199.1	Protein Homology	CDS	2497	3735	.	+	0	ID=cds-WP_146712352.1;Parent=gene-C9F04_RS04695;Dbxref=Genbank:WP_146712352.1;Name=WP_146712352.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9F04_RS04695;product=DNA uptake porin HofQ;protein_id=WP_146712352.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	4200	4721	.	+	.	ID=gene-C9F04_RS04700;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9F04_RS04700;old_locus_tag=C9F04_04860
NZ_PYKF01000199.1	Protein Homology	CDS	4200	4721	.	+	0	ID=cds-WP_146712353.1;Parent=gene-C9F04_RS04700;Dbxref=Genbank:WP_146712353.1;Name=WP_146712353.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9F04_RS04700;product=shikimate kinase AroK;protein_id=WP_146712353.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	4778	5866	.	+	.	ID=gene-C9F04_RS04705;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9F04_RS04705;old_locus_tag=C9F04_04865
NZ_PYKF01000199.1	Protein Homology	CDS	4778	5866	.	+	0	ID=cds-WP_146712354.1;Parent=gene-C9F04_RS04705;Dbxref=Genbank:WP_146712354.1;Name=WP_146712354.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9F04_RS04705;product=3-dehydroquinate synthase;protein_id=WP_146712354.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	5964	7241	.	+	.	ID=gene-C9F04_RS04710;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9F04_RS04710;old_locus_tag=C9F04_04870
NZ_PYKF01000199.1	Protein Homology	CDS	5964	7241	.	+	0	ID=cds-WP_135369358.1;Parent=gene-C9F04_RS04710;Dbxref=Genbank:WP_135369358.1;Name=WP_135369358.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9F04_RS04710;product=cell division protein DamX;protein_id=WP_135369358.1;transl_table=11
NZ_PYKF01000199.1	RefSeq	gene	7422	8258	.	+	.	ID=gene-C9F04_RS04715;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9F04_RS04715;old_locus_tag=C9F04_04875
NZ_PYKF01000199.1	Protein Homology	CDS	7422	8258	.	+	0	ID=cds-WP_000742132.1;Parent=gene-C9F04_RS04715;Dbxref=Genbank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9F04_RS04715;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11
##sequence-region NZ_PYKF01000467.1 1 8302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000467.1	RefSeq	region	1	8302	.	+	.	ID=NZ_PYKF01000467.1:1..8302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000467.1	RefSeq	gene	1	694	.	+	.	ID=gene-C9F04_RS14060;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9F04_RS14060;old_locus_tag=C9F04_14515;partial=true;start_range=.,1
NZ_PYKF01000467.1	Protein Homology	CDS	1	694	.	+	1	ID=cds-WP_146712783.1;Parent=gene-C9F04_RS14060;Dbxref=Genbank:WP_146712783.1;Name=WP_146712783.1;Ontology_term=GO:0006950,GO:0008253,GO:0008254;gbkey=CDS;gene=surE;go_function=5'-nucleotidase activity|0008253||IEA,3'-nucleotidase activity|0008254||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: protein motif:HMM:TIGR00087.1;locus_tag=C9F04_RS14060;partial=true;product=5'/3'-nucleotidase SurE;protein_id=WP_146712783.1;start_range=.,1;transl_table=11
NZ_PYKF01000467.1	RefSeq	gene	791	1846	.	+	.	ID=gene-C9F04_RS14065;Name=C9F04_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14065;old_locus_tag=C9F04_14520
NZ_PYKF01000467.1	Protein Homology	CDS	791	1846	.	+	0	ID=cds-WP_146712784.1;Parent=gene-C9F04_RS14065;Dbxref=Genbank:WP_146712784.1;Name=WP_146712784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.2;locus_tag=C9F04_RS14065;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_146712784.1;transl_table=11
NZ_PYKF01000467.1	RefSeq	pseudogene	2021	2224	.	-	.	ID=gene-C9F04_RS14070;Name=C9F04_RS14070;end_range=2224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14070;old_locus_tag=C9F04_14525;partial=true;pseudo=true;start_range=.,2021
NZ_PYKF01000467.1	Protein Homology	CDS	2021	2224	.	-	0	ID=cds-C9F04_RS14070;Parent=gene-C9F04_RS14070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=C9F04_RS14070;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,2021;transl_table=11
NZ_PYKF01000467.1	RefSeq	gene	2330	2617	.	+	.	ID=gene-C9F04_RS14075;Name=C9F04_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14075;old_locus_tag=C9F04_14530
NZ_PYKF01000467.1	Protein Homology	CDS	2330	2617	.	+	0	ID=cds-WP_135369534.1;Parent=gene-C9F04_RS14075;Dbxref=Genbank:WP_135369534.1;Name=WP_135369534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9F04_RS14075;product=DUF1493 family protein;protein_id=WP_135369534.1;transl_table=11
NZ_PYKF01000467.1	RefSeq	gene	3625	4551	.	+	.	ID=gene-C9F04_RS14090;Name=C9F04_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14090;old_locus_tag=C9F04_14545
NZ_PYKF01000467.1	Protein Homology	CDS	3625	4551	.	+	0	ID=cds-WP_135369535.1;Parent=gene-C9F04_RS14090;Dbxref=Genbank:WP_135369535.1;Name=WP_135369535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9F04_RS14090;product=LysR family transcriptional regulator;protein_id=WP_135369535.1;transl_table=11
NZ_PYKF01000467.1	RefSeq	gene	4700	6166	.	-	.	ID=gene-C9F04_RS14095;Name=C9F04_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14095;old_locus_tag=C9F04_14550
NZ_PYKF01000467.1	Protein Homology	CDS	4700	6166	.	-	0	ID=cds-WP_135369536.1;Parent=gene-C9F04_RS14095;Dbxref=Genbank:WP_135369536.1;Name=WP_135369536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9F04_RS14095;product=hypothetical protein;protein_id=WP_135369536.1;transl_table=11
NZ_PYKF01000467.1	RefSeq	gene	6424	7431	.	+	.	ID=gene-C9F04_RS14100;Name=C9F04_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14100;old_locus_tag=C9F04_14555
NZ_PYKF01000467.1	Protein Homology	CDS	6424	7431	.	+	0	ID=cds-WP_146712785.1;Parent=gene-C9F04_RS14100;Dbxref=Genbank:WP_146712785.1;Name=WP_146712785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F04_RS14100;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_146712785.1;transl_table=11
NZ_PYKF01000467.1	RefSeq	pseudogene	7575	8302	.	+	.	ID=gene-C9F04_RS14105;Name=C9F04_RS14105;end_range=8302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14105;old_locus_tag=C9F04_14560;partial=true;pseudo=true
NZ_PYKF01000467.1	Protein Homology	CDS	7575	8302	.	+	0	ID=cds-C9F04_RS14105;Parent=gene-C9F04_RS14105;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F04_RS14105;partial=true;product=Na+/H+ antiporter NhaC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000540.1 1 21140
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000540.1	RefSeq	region	1	21140	.	+	.	ID=NZ_PYKF01000540.1:1..21140;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000540.1	RefSeq	gene	1	744	.	-	.	ID=gene-C9F04_RS16115;Name=C9F04_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16115;old_locus_tag=C9F04_16615;partial=true;start_range=.,1
NZ_PYKF01000540.1	Protein Homology	CDS	1	744	.	-	0	ID=cds-WP_261771295.1;Parent=gene-C9F04_RS16115;Dbxref=Genbank:WP_261771295.1;Name=WP_261771295.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F04_RS16115;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_261771295.1;start_range=.,1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	759	1649	.	-	.	ID=gene-C9F04_RS16120;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9F04_RS16120;old_locus_tag=C9F04_16620
NZ_PYKF01000540.1	Protein Homology	CDS	759	1649	.	-	0	ID=cds-WP_146712875.1;Parent=gene-C9F04_RS16120;Dbxref=Genbank:WP_146712875.1;Name=WP_146712875.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9F04_RS16120;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_146712875.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	1649	2446	.	-	.	ID=gene-C9F04_RS16125;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9F04_RS16125;old_locus_tag=C9F04_16625
NZ_PYKF01000540.1	Protein Homology	CDS	1649	2446	.	-	0	ID=cds-WP_001157197.1;Parent=gene-C9F04_RS16125;Dbxref=Genbank:WP_001157197.1;Name=WP_001157197.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9F04_RS16125;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157197.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	2495	4738	.	-	.	ID=gene-C9F04_RS16130;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9F04_RS16130;old_locus_tag=C9F04_16630
NZ_PYKF01000540.1	Protein Homology	CDS	2495	4738	.	-	0	ID=cds-WP_010835134.1;Parent=gene-C9F04_RS16130;Dbxref=Genbank:WP_010835134.1;Name=WP_010835134.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=C9F04_RS16130;product=ferrichrome porin FhuA;protein_id=WP_010835134.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	5031	7553	.	-	.	ID=gene-C9F04_RS16135;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9F04_RS16135;old_locus_tag=C9F04_16635
NZ_PYKF01000540.1	Protein Homology	CDS	5031	7553	.	-	0	ID=cds-WP_146712876.1;Parent=gene-C9F04_RS16135;Dbxref=Genbank:WP_146712876.1;Name=WP_146712876.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9F04_RS16135;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_146712876.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	pseudogene	7694	10123	.	-	.	ID=gene-C9F04_RS16140;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=C9F04_RS16140;old_locus_tag=C9F04_16640;pseudo=true
NZ_PYKF01000540.1	Protein Homology	CDS	7694	10123	.	-	0	ID=cds-C9F04_RS16140;Parent=gene-C9F04_RS16140;Note=internal stop;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=C9F04_RS16140;product=ATP-dependent helicase HrpB;pseudo=true;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	10196	10726	.	+	.	ID=gene-C9F04_RS16145;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9F04_RS16145;old_locus_tag=C9F04_16645
NZ_PYKF01000540.1	Protein Homology	CDS	10196	10726	.	+	0	ID=cds-WP_146712877.1;Parent=gene-C9F04_RS16145;Dbxref=Genbank:WP_146712877.1;Name=WP_146712877.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9F04_RS16145;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_146712877.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	10743	11447	.	+	.	ID=gene-C9F04_RS16150;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9F04_RS16150;old_locus_tag=C9F04_16650
NZ_PYKF01000540.1	Protein Homology	CDS	10743	11447	.	+	0	ID=cds-WP_000899408.1;Parent=gene-C9F04_RS16150;Dbxref=Genbank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9F04_RS16150;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	11624	12073	.	+	.	ID=gene-C9F04_RS16155;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9F04_RS16155;old_locus_tag=C9F04_16655
NZ_PYKF01000540.1	Protein Homology	CDS	11624	12073	.	+	0	ID=cds-WP_050149089.1;Parent=gene-C9F04_RS16155;Dbxref=Genbank:WP_050149089.1;Name=WP_050149089.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9F04_RS16155;product=RNA polymerase-binding protein DksA;protein_id=WP_050149089.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	12142	13038	.	+	.	ID=gene-C9F04_RS16160;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9F04_RS16160;old_locus_tag=C9F04_16660
NZ_PYKF01000540.1	Protein Homology	CDS	12142	13038	.	+	0	ID=cds-WP_135369507.1;Parent=gene-C9F04_RS16160;Dbxref=Genbank:WP_135369507.1;Name=WP_135369507.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9F04_RS16160;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_135369507.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	13200	14597	.	+	.	ID=gene-C9F04_RS16165;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9F04_RS16165;old_locus_tag=C9F04_16665
NZ_PYKF01000540.1	Protein Homology	CDS	13200	14597	.	+	0	ID=cds-WP_222591891.1;Parent=gene-C9F04_RS16165;Dbxref=Genbank:WP_222591891.1;Name=WP_222591891.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9F04_RS16165;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_222591891.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	14594	15073	.	+	.	ID=gene-C9F04_RS16170;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9F04_RS16170;old_locus_tag=C9F04_16670
NZ_PYKF01000540.1	Protein Homology	CDS	14594	15073	.	+	0	ID=cds-WP_000150777.1;Parent=gene-C9F04_RS16170;Dbxref=Genbank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9F04_RS16170;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	15194	15985	.	+	.	ID=gene-C9F04_RS16175;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9F04_RS16175;old_locus_tag=C9F04_16675
NZ_PYKF01000540.1	Protein Homology	CDS	15194	15985	.	+	0	ID=cds-WP_000805489.1;Parent=gene-C9F04_RS16175;Dbxref=Genbank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9F04_RS16175;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	16111	16965	.	+	.	ID=gene-C9F04_RS16180;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9F04_RS16180;old_locus_tag=C9F04_16680
NZ_PYKF01000540.1	Protein Homology	CDS	16111	16965	.	+	0	ID=cds-WP_061424198.1;Parent=gene-C9F04_RS16180;Dbxref=Genbank:WP_061424198.1;Name=WP_061424198.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9F04_RS16180;product=pantoate--beta-alanine ligase;protein_id=WP_061424198.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	17060	17440	.	+	.	ID=gene-C9F04_RS16185;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9F04_RS16185;old_locus_tag=C9F04_16685
NZ_PYKF01000540.1	Protein Homology	CDS	17060	17440	.	+	0	ID=cds-WP_000621526.1;Parent=gene-C9F04_RS16185;Dbxref=Genbank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9F04_RS16185;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	17447	18676	.	-	.	ID=gene-C9F04_RS16190;Name=C9F04_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16190;old_locus_tag=C9F04_16690
NZ_PYKF01000540.1	Protein Homology	CDS	17447	18676	.	-	0	ID=cds-WP_135369506.1;Parent=gene-C9F04_RS16190;Dbxref=Genbank:WP_135369506.1;Name=WP_135369506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9F04_RS16190;product=polysaccharide deacetylase family protein;protein_id=WP_135369506.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	18738	19178	.	-	.	ID=gene-C9F04_RS16195;Name=C9F04_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16195;old_locus_tag=C9F04_16695
NZ_PYKF01000540.1	Protein Homology	CDS	18738	19178	.	-	0	ID=cds-WP_000901958.1;Parent=gene-C9F04_RS16195;Dbxref=Genbank:WP_000901958.1;Name=WP_000901958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9F04_RS16195;product=PTS sugar transporter subunit IIA;protein_id=WP_000901958.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	19548	20087	.	+	.	ID=gene-C9F04_RS16200;Name=C9F04_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16200;old_locus_tag=C9F04_16700
NZ_PYKF01000540.1	Protein Homology	CDS	19548	20087	.	+	0	ID=cds-WP_001821456.1;Parent=gene-C9F04_RS16200;Dbxref=Genbank:WP_001821456.1;Name=WP_001821456.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9F04_RS16200;product=fimbrial protein;protein_id=WP_001821456.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	gene	20135	20818	.	+	.	ID=gene-C9F04_RS16205;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9F04_RS16205;old_locus_tag=C9F04_16705
NZ_PYKF01000540.1	Protein Homology	CDS	20135	20818	.	+	0	ID=cds-WP_001086408.1;Parent=gene-C9F04_RS16205;Dbxref=Genbank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9F04_RS16205;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11
NZ_PYKF01000540.1	RefSeq	pseudogene	20845	21102	.	+	.	ID=gene-C9F04_RS16210;Name=C9F04_RS16210;end_range=21102,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16210;old_locus_tag=C9F04_16710;partial=true;pseudo=true
NZ_PYKF01000540.1	Protein Homology	CDS	20845	21102	.	+	0	ID=cds-C9F04_RS16210;Parent=gene-C9F04_RS16210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F04_RS16210;partial=true;product=fimbrial assembly protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000662.1 1 8298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000662.1	RefSeq	region	1	8298	.	+	.	ID=NZ_PYKF01000662.1:1..8298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000662.1	RefSeq	pseudogene	1	2068	.	+	.	ID=gene-C9F04_RS20275;Name=C9F04_RS20275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20275;old_locus_tag=C9F04_20940;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000662.1	Protein Homology	CDS	1	2068	.	+	1	ID=cds-C9F04_RS20275;Parent=gene-C9F04_RS20275;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9F04_RS20275;partial=true;product=YhdP family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000662.1	RefSeq	gene	2213	3658	.	+	.	ID=gene-C9F04_RS20280;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9F04_RS20280;old_locus_tag=C9F04_20945
NZ_PYKF01000662.1	Protein Homology	CDS	2213	3658	.	+	0	ID=cds-WP_000055940.1;Parent=gene-C9F04_RS20280;Dbxref=Genbank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9F04_RS20280;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11
NZ_PYKF01000662.1	RefSeq	gene	3780	4709	.	-	.	ID=gene-C9F04_RS20285;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9F04_RS20285;old_locus_tag=C9F04_20950
NZ_PYKF01000662.1	Protein Homology	CDS	3780	4709	.	-	0	ID=cds-WP_000440300.1;Parent=gene-C9F04_RS20285;Dbxref=Genbank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9F04_RS20285;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11
NZ_PYKF01000662.1	RefSeq	gene	4891	5094	.	+	.	ID=gene-C9F04_RS20290;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9F04_RS20290;old_locus_tag=C9F04_20955
NZ_PYKF01000662.1	Protein Homology	CDS	4891	5094	.	+	0	ID=cds-WP_000051840.1;Parent=gene-C9F04_RS20290;Dbxref=Genbank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9F04_RS20290;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11
NZ_PYKF01000662.1	RefSeq	gene	5102	6034	.	+	.	ID=gene-C9F04_RS20295;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9F04_RS20295;old_locus_tag=C9F04_20960
NZ_PYKF01000662.1	Protein Homology	CDS	5102	6034	.	+	0	ID=cds-WP_000855134.1;Parent=gene-C9F04_RS20295;Dbxref=Genbank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9F04_RS20295;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11
NZ_PYKF01000662.1	RefSeq	gene	6040	8007	.	+	.	ID=gene-C9F04_RS20300;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9F04_RS20300;old_locus_tag=C9F04_20965
NZ_PYKF01000662.1	Protein Homology	CDS	6040	8007	.	+	0	ID=cds-WP_146713080.1;Parent=gene-C9F04_RS20300;Dbxref=Genbank:WP_146713080.1;Name=WP_146713080.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9F04_RS20300;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_146713080.1;transl_table=11
NZ_PYKF01000662.1	RefSeq	pseudogene	8179	8298	.	+	.	ID=gene-C9F04_RS27175;Name=C9F04_RS27175;end_range=8298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27175;partial=true;pseudo=true
NZ_PYKF01000662.1	Protein Homology	CDS	8179	8298	.	+	0	ID=cds-C9F04_RS27175;Parent=gene-C9F04_RS27175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9F04_RS27175;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000332.1 1 8292
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000332.1	RefSeq	region	1	8292	.	+	.	ID=NZ_PYKF01000332.1:1..8292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000332.1	RefSeq	gene	1	1209	.	+	.	ID=gene-C9F04_RS09705;Name=C9F04_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09705;old_locus_tag=C9F04_10015;partial=true;start_range=.,1
NZ_PYKF01000332.1	Protein Homology	CDS	1	1209	.	+	0	ID=cds-WP_146712562.1;Parent=gene-C9F04_RS09705;Dbxref=Genbank:WP_146712562.1;Name=WP_146712562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9F04_RS09705;partial=true;product=hemolysin family protein;protein_id=WP_146712562.1;start_range=.,1;transl_table=11
NZ_PYKF01000332.1	RefSeq	gene	1295	3151	.	-	.	ID=gene-C9F04_RS09710;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9F04_RS09710;old_locus_tag=C9F04_10020
NZ_PYKF01000332.1	Protein Homology	CDS	1295	3151	.	-	0	ID=cds-WP_135369374.1;Parent=gene-C9F04_RS09710;Dbxref=Genbank:WP_135369374.1;Name=WP_135369374.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F04_RS09710;product=outer membrane assembly protein AsmA;protein_id=WP_135369374.1;transl_table=11
NZ_PYKF01000332.1	RefSeq	gene	3190	3771	.	-	.	ID=gene-C9F04_RS09715;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9F04_RS09715;old_locus_tag=C9F04_10025
NZ_PYKF01000332.1	Protein Homology	CDS	3190	3771	.	-	0	ID=cds-WP_001234783.1;Parent=gene-C9F04_RS09715;Dbxref=Genbank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9F04_RS09715;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11
NZ_PYKF01000332.1	RefSeq	gene	3862	4503	.	-	.	ID=gene-C9F04_RS09720;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9F04_RS09720;old_locus_tag=C9F04_10030
NZ_PYKF01000332.1	Protein Homology	CDS	3862	4503	.	-	0	ID=cds-WP_000132082.1;Parent=gene-C9F04_RS09720;Dbxref=Genbank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9F04_RS09720;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11
NZ_PYKF01000332.1	RefSeq	gene	4834	7824	.	+	.	ID=gene-C9F04_RS09725;Name=C9F04_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09725;old_locus_tag=C9F04_10035
NZ_PYKF01000332.1	Protein Homology	CDS	4834	7824	.	+	0	ID=cds-WP_146712563.1;Parent=gene-C9F04_RS09725;Dbxref=Genbank:WP_146712563.1;Name=WP_146712563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9F04_RS09725;product=MASE1 domain-containing protein;protein_id=WP_146712563.1;transl_table=11
NZ_PYKF01000332.1	RefSeq	gene	7792	8292	.	-	.	ID=gene-C9F04_RS09730;Name=alkA;end_range=8292,.;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9F04_RS09730;old_locus_tag=C9F04_10040;partial=true
NZ_PYKF01000332.1	Protein Homology	CDS	7792	8292	.	-	0	ID=cds-WP_146712564.1;Parent=gene-C9F04_RS09730;Dbxref=Genbank:WP_146712564.1;Name=WP_146712564.1;Ontology_term=GO:0006281,GO:0003824;end_range=8292,.;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131687.1;locus_tag=C9F04_RS09730;partial=true;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_146712564.1;transl_table=11
##sequence-region NZ_PYKF01000627.1 1 8275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000627.1	RefSeq	region	1	8275	.	+	.	ID=NZ_PYKF01000627.1:1..8275;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000627.1	RefSeq	gene	1	520	.	-	.	ID=gene-C9F04_RS19015;Name=C9F04_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19015;old_locus_tag=C9F04_19635;partial=true;start_range=.,1
NZ_PYKF01000627.1	Protein Homology	CDS	1	520	.	-	0	ID=cds-WP_146713018.1;Parent=gene-C9F04_RS19015;Dbxref=Genbank:WP_146713018.1;Name=WP_146713018.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9F04_RS19015;partial=true;product=MFS transporter;protein_id=WP_146713018.1;start_range=.,1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	1013	2167	.	-	.	ID=gene-C9F04_RS19020;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9F04_RS19020;old_locus_tag=C9F04_19640
NZ_PYKF01000627.1	Protein Homology	CDS	1013	2167	.	-	0	ID=cds-WP_001062140.1;Parent=gene-C9F04_RS19020;Dbxref=Genbank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9F04_RS19020;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	2223	2522	.	+	.	ID=gene-C9F04_RS19025;Name=C9F04_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19025;old_locus_tag=C9F04_19645
NZ_PYKF01000627.1	GeneMarkS-2+	CDS	2223	2522	.	+	0	ID=cds-WP_146713019.1;Parent=gene-C9F04_RS19025;Dbxref=Genbank:WP_146713019.1;Name=WP_146713019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS19025;product=hypothetical protein;protein_id=WP_146713019.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	2817	2948	.	+	.	ID=gene-C9F04_RS19030;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9F04_RS19030;old_locus_tag=C9F04_19655
NZ_PYKF01000627.1	Protein Homology	CDS	2817	2948	.	+	0	ID=cds-WP_000729109.1;Parent=gene-C9F04_RS19030;Dbxref=Genbank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9F04_RS19030;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	2957	4933	.	+	.	ID=gene-C9F04_RS19035;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9F04_RS19035;old_locus_tag=C9F04_19660
NZ_PYKF01000627.1	Protein Homology	CDS	2957	4933	.	+	0	ID=cds-WP_001278580.1;Parent=gene-C9F04_RS19035;Dbxref=Genbank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9F04_RS19035;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	5078	5809	.	+	.	ID=gene-C9F04_RS19040;Name=C9F04_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19040;old_locus_tag=C9F04_19665
NZ_PYKF01000627.1	Protein Homology	CDS	5078	5809	.	+	0	ID=cds-WP_000032796.1;Parent=gene-C9F04_RS19040;Dbxref=Genbank:WP_000032796.1;Name=WP_000032796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9F04_RS19040;product=hypothetical protein;protein_id=WP_000032796.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	gene	5963	6763	.	+	.	ID=gene-C9F04_RS19045;Name=C9F04_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19045;old_locus_tag=C9F04_19670
NZ_PYKF01000627.1	Protein Homology	CDS	5963	6763	.	+	0	ID=cds-WP_001576357.1;Parent=gene-C9F04_RS19045;Dbxref=Genbank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9F04_RS19045;product=FadR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11
NZ_PYKF01000627.1	RefSeq	pseudogene	6842	7464	.	-	.	ID=gene-C9F04_RS19050;Name=C9F04_RS19050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19050;old_locus_tag=C9F04_19675;pseudo=true
NZ_PYKF01000627.1	Protein Homology	CDS	6842	7464	.	-	0	ID=cds-C9F04_RS19050;Parent=gene-C9F04_RS19050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727271.1;locus_tag=C9F04_RS19050;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000627.1	RefSeq	pseudogene	7996	8275	.	+	.	ID=gene-C9F04_RS19055;Name=C9F04_RS19055;end_range=8275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19055;old_locus_tag=C9F04_19680;partial=true;pseudo=true
NZ_PYKF01000627.1	Protein Homology	CDS	7996	8275	.	+	0	ID=cds-C9F04_RS19055;Parent=gene-C9F04_RS19055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9F04_RS19055;partial=true;product=fructuronate reductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000674.1 1 8187
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000674.1	RefSeq	region	1	8187	.	+	.	ID=NZ_PYKF01000674.1:1..8187;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000674.1	RefSeq	pseudogene	22	117	.	+	.	ID=gene-C9F04_RS27185;Name=C9F04_RS27185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27185;partial=true;pseudo=true;start_range=.,22
NZ_PYKF01000674.1	Protein Homology	CDS	22	117	.	+	0	ID=cds-C9F04_RS27185;Parent=gene-C9F04_RS27185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9F04_RS27185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,22;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	178	444	.	-	.	ID=gene-C9F04_RS20665;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9F04_RS20665;old_locus_tag=C9F04_21335
NZ_PYKF01000674.1	Protein Homology	CDS	178	444	.	-	0	ID=cds-WP_000853277.1;Parent=gene-C9F04_RS20665;Dbxref=Genbank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9F04_RS20665;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	548	811	.	-	.	ID=gene-C9F04_RS20670;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9F04_RS20670;old_locus_tag=C9F04_21340
NZ_PYKF01000674.1	Protein Homology	CDS	548	811	.	-	0	ID=cds-WP_000695695.1;Parent=gene-C9F04_RS20670;Dbxref=Genbank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9F04_RS20670;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	1176	1646	.	-	.	ID=gene-C9F04_RS20675;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9F04_RS20675;old_locus_tag=C9F04_21345
NZ_PYKF01000674.1	Protein Homology	CDS	1176	1646	.	-	0	ID=cds-WP_001257852.1;Parent=gene-C9F04_RS20675;Dbxref=Genbank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9F04_RS20675;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	2061	2999	.	+	.	ID=gene-C9F04_RS20680;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9F04_RS20680;old_locus_tag=C9F04_21350
NZ_PYKF01000674.1	Protein Homology	CDS	2061	2999	.	+	0	ID=cds-WP_146713101.1;Parent=gene-C9F04_RS20680;Dbxref=Genbank:WP_146713101.1;Name=WP_146713101.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F04_RS20680;product=malate dehydrogenase;protein_id=WP_146713101.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	3119	3748	.	+	.	ID=gene-C9F04_RS20685;Name=C9F04_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20685;old_locus_tag=C9F04_21355
NZ_PYKF01000674.1	Protein Homology	CDS	3119	3748	.	+	0	ID=cds-WP_000723776.1;Parent=gene-C9F04_RS20685;Dbxref=Genbank:WP_000723776.1;Name=WP_000723776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9F04_RS20685;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	3735	4400	.	+	.	ID=gene-C9F04_RS20690;Name=C9F04_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20690;old_locus_tag=C9F04_21360
NZ_PYKF01000674.1	Protein Homology	CDS	3735	4400	.	+	0	ID=cds-WP_001171581.1;Parent=gene-C9F04_RS20690;Dbxref=Genbank:WP_001171581.1;Name=WP_001171581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9F04_RS20690;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	pseudogene	4611	5879	.	+	.	ID=gene-C9F04_RS20695;Name=C9F04_RS20695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20695;old_locus_tag=C9F04_21365;pseudo=true
NZ_PYKF01000674.1	Protein Homology	CDS	4611	5879	.	+	0	ID=cds-C9F04_RS20695;Parent=gene-C9F04_RS20695;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9F04_RS20695;product=SLC13 family permease;pseudo=true;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	5912	6811	.	+	.	ID=gene-C9F04_RS20700;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9F04_RS20700;old_locus_tag=C9F04_21370
NZ_PYKF01000674.1	Protein Homology	CDS	5912	6811	.	+	0	ID=cds-WP_000045349.1;Parent=gene-C9F04_RS20700;Dbxref=Genbank:WP_000045349.1;Name=WP_000045349.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9F04_RS20700;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	6811	7428	.	+	.	ID=gene-C9F04_RS20705;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9F04_RS20705;old_locus_tag=C9F04_21375
NZ_PYKF01000674.1	Protein Homology	CDS	6811	7428	.	+	0	ID=cds-WP_000162405.1;Parent=gene-C9F04_RS20705;Dbxref=Genbank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9F04_RS20705;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	gene	7585	7836	.	+	.	ID=gene-C9F04_RS20710;Name=C9F04_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20710;old_locus_tag=C9F04_21380
NZ_PYKF01000674.1	Protein Homology	CDS	7585	7836	.	+	0	ID=cds-WP_146713102.1;Parent=gene-C9F04_RS20710;Dbxref=Genbank:WP_146713102.1;Name=WP_146713102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145015.1;locus_tag=C9F04_RS20710;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_146713102.1;transl_table=11
NZ_PYKF01000674.1	RefSeq	pseudogene	7852	8187	.	+	.	ID=gene-C9F04_RS20715;Name=C9F04_RS20715;end_range=8187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20715;old_locus_tag=C9F04_21385;partial=true;pseudo=true
NZ_PYKF01000674.1	Protein Homology	CDS	7852	8187	.	+	0	ID=cds-C9F04_RS20715;Parent=gene-C9F04_RS20715;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS20715;partial=true;product=oxaloacetate decarboxylase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000104.1 1 8253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000104.1	RefSeq	region	1	8253	.	+	.	ID=NZ_PYKF01000104.1:1..8253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000104.1	RefSeq	gene	44	721	.	+	.	ID=gene-C9F04_RS01990;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9F04_RS01990;old_locus_tag=C9F04_02075
NZ_PYKF01000104.1	Protein Homology	CDS	44	721	.	+	0	ID=cds-WP_146712221.1;Parent=gene-C9F04_RS01990;Dbxref=Genbank:WP_146712221.1;Name=WP_146712221.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9F04_RS01990;product=ribulose-phosphate 3-epimerase;protein_id=WP_146712221.1;transl_table=11
NZ_PYKF01000104.1	RefSeq	gene	714	1472	.	+	.	ID=gene-C9F04_RS01995;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9F04_RS01995;old_locus_tag=C9F04_02080
NZ_PYKF01000104.1	Protein Homology	CDS	714	1472	.	+	0	ID=cds-WP_135369357.1;Parent=gene-C9F04_RS01995;Dbxref=Genbank:WP_135369357.1;Name=WP_135369357.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9F04_RS01995;product=phosphoglycolate phosphatase;protein_id=WP_135369357.1;transl_table=11
NZ_PYKF01000104.1	RefSeq	gene	1465	2469	.	+	.	ID=gene-C9F04_RS02000;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F04_RS02000;old_locus_tag=C9F04_02085
NZ_PYKF01000104.1	Protein Homology	CDS	1465	2469	.	+	0	ID=cds-WP_146712220.1;Parent=gene-C9F04_RS02000;Dbxref=Genbank:WP_146712220.1;Name=WP_146712220.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9F04_RS02000;product=tryptophan--tRNA ligase;protein_id=WP_146712220.1;transl_table=11
NZ_PYKF01000104.1	RefSeq	gene	2614	2784	.	-	.	ID=gene-C9F04_RS02005;Name=C9F04_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02005;old_locus_tag=C9F04_02090
NZ_PYKF01000104.1	Protein Homology	CDS	2614	2784	.	-	0	ID=cds-WP_000472323.1;Parent=gene-C9F04_RS02005;Dbxref=Genbank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9F04_RS02005;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11
NZ_PYKF01000104.1	RefSeq	gene	2977	8253	.	-	.	ID=gene-C9F04_RS02010;Name=C9F04_RS02010;end_range=8253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02010;old_locus_tag=C9F04_02095;partial=true
NZ_PYKF01000104.1	Protein Homology	CDS	2977	8253	.	-	0	ID=cds-WP_261770737.1;Parent=gene-C9F04_RS02010;Dbxref=Genbank:WP_261770737.1;Name=WP_261770737.1;end_range=8253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F04_RS02010;partial=true;product=autotransporter adhesin BigA;protein_id=WP_261770737.1;transl_table=11
##sequence-region NZ_PYKF01000536.1 1 8216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000536.1	RefSeq	region	1	8216	.	+	.	ID=NZ_PYKF01000536.1:1..8216;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000536.1	RefSeq	gene	1	1507	.	+	.	ID=gene-C9F04_RS16000;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9F04_RS16000;old_locus_tag=C9F04_16500;partial=true;start_range=.,1
NZ_PYKF01000536.1	Protein Homology	CDS	1	1507	.	+	1	ID=cds-WP_146712870.1;Parent=gene-C9F04_RS16000;Dbxref=Genbank:WP_146712870.1;Name=WP_146712870.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9F04_RS16000;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_146712870.1;start_range=.,1;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	1640	2650	.	-	.	ID=gene-C9F04_RS16005;Name=C9F04_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16005;old_locus_tag=C9F04_16505
NZ_PYKF01000536.1	Protein Homology	CDS	1640	2650	.	-	0	ID=cds-WP_000900307.1;Parent=gene-C9F04_RS16005;Dbxref=Genbank:WP_000900307.1;Name=WP_000900307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=C9F04_RS16005;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	2668	3729	.	-	.	ID=gene-C9F04_RS16010;Name=C9F04_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16010;old_locus_tag=C9F04_16510
NZ_PYKF01000536.1	Protein Homology	CDS	2668	3729	.	-	0	ID=cds-WP_135369564.1;Parent=gene-C9F04_RS16010;Dbxref=Genbank:WP_135369564.1;Name=WP_135369564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9F04_RS16010;product=SIS domain-containing protein;protein_id=WP_135369564.1;transl_table=11
NZ_PYKF01000536.1	RefSeq	pseudogene	3742	4590	.	-	.	ID=gene-C9F04_RS16015;Name=C9F04_RS16015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16015;old_locus_tag=C9F04_16515;pseudo=true
NZ_PYKF01000536.1	Protein Homology	CDS	3742	4590	.	-	0	ID=cds-C9F04_RS16015;Parent=gene-C9F04_RS16015;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=C9F04_RS16015;product=PTS system mannose/fructose/sorbose family transporter subunit IID;pseudo=true;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	4568	5347	.	-	.	ID=gene-C9F04_RS16020;Name=C9F04_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16020;old_locus_tag=C9F04_16520
NZ_PYKF01000536.1	Protein Homology	CDS	4568	5347	.	-	0	ID=cds-WP_000228866.1;Parent=gene-C9F04_RS16020;Dbxref=Genbank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9F04_RS16020;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	5373	5834	.	-	.	ID=gene-C9F04_RS16025;Name=C9F04_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16025;old_locus_tag=C9F04_16525
NZ_PYKF01000536.1	Protein Homology	CDS	5373	5834	.	-	0	ID=cds-WP_000634729.1;Parent=gene-C9F04_RS16025;Dbxref=Genbank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9F04_RS16025;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	5849	6271	.	-	.	ID=gene-C9F04_RS16030;Name=C9F04_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16030;old_locus_tag=C9F04_16530
NZ_PYKF01000536.1	Protein Homology	CDS	5849	6271	.	-	0	ID=cds-WP_000820693.1;Parent=gene-C9F04_RS16030;Dbxref=Genbank:WP_000820693.1;Name=WP_000820693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9F04_RS16030;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11
NZ_PYKF01000536.1	RefSeq	gene	6373	8216	.	-	.	ID=gene-C9F04_RS16035;Name=C9F04_RS16035;end_range=8216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16035;old_locus_tag=C9F04_16535;partial=true
NZ_PYKF01000536.1	Protein Homology	CDS	6373	8216	.	-	2	ID=cds-WP_146712871.1;Parent=gene-C9F04_RS16035;Dbxref=Genbank:WP_146712871.1;Name=WP_146712871.1;Ontology_term=GO:0006355;end_range=8216,.;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F04_RS16035;partial=true;product=PRD domain-containing protein;protein_id=WP_146712871.1;transl_table=11
##sequence-region NZ_PYKF01000114.1 1 8208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000114.1	RefSeq	region	1	8208	.	+	.	ID=NZ_PYKF01000114.1:1..8208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000114.1	RefSeq	gene	1	705	.	-	.	ID=gene-C9F04_RS02200;Name=C9F04_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02200;old_locus_tag=C9F04_02280;partial=true;start_range=.,1
NZ_PYKF01000114.1	Protein Homology	CDS	1	705	.	-	0	ID=cds-WP_146712230.1;Parent=gene-C9F04_RS02200;Dbxref=Genbank:WP_146712230.1;Name=WP_146712230.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906467.1;locus_tag=C9F04_RS02200;partial=true;product=MFS transporter;protein_id=WP_146712230.1;start_range=.,1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	831	1739	.	+	.	ID=gene-C9F04_RS02205;Name=C9F04_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02205;old_locus_tag=C9F04_02285
NZ_PYKF01000114.1	Protein Homology	CDS	831	1739	.	+	0	ID=cds-WP_000024658.1;Parent=gene-C9F04_RS02205;Dbxref=Genbank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9F04_RS02205;product=LysR family transcriptional regulator;protein_id=WP_000024658.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	1871	2269	.	+	.	ID=gene-C9F04_RS02210;Name=C9F04_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02210;old_locus_tag=C9F04_02290
NZ_PYKF01000114.1	Protein Homology	CDS	1871	2269	.	+	0	ID=cds-WP_000045719.1;Parent=gene-C9F04_RS02210;Dbxref=Genbank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9F04_RS02210;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	2266	2961	.	+	.	ID=gene-C9F04_RS02215;Name=C9F04_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02215;old_locus_tag=C9F04_02295
NZ_PYKF01000114.1	Protein Homology	CDS	2266	2961	.	+	0	ID=cds-WP_000989296.1;Parent=gene-C9F04_RS02215;Dbxref=Genbank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9F04_RS02215;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	3115	3999	.	+	.	ID=gene-C9F04_RS02220;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9F04_RS02220;old_locus_tag=C9F04_02300
NZ_PYKF01000114.1	Protein Homology	CDS	3115	3999	.	+	0	ID=cds-WP_000553526.1;Parent=gene-C9F04_RS02220;Dbxref=Genbank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9F04_RS02220;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	4176	4895	.	+	.	ID=gene-C9F04_RS02225;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9F04_RS02225;old_locus_tag=C9F04_02305
NZ_PYKF01000114.1	Protein Homology	CDS	4176	4895	.	+	0	ID=cds-WP_000920081.1;Parent=gene-C9F04_RS02225;Dbxref=Genbank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9F04_RS02225;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	4892	5137	.	+	.	ID=gene-C9F04_RS02230;Name=C9F04_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02230;old_locus_tag=C9F04_02310
NZ_PYKF01000114.1	Protein Homology	CDS	4892	5137	.	+	0	ID=cds-WP_000605187.1;Parent=gene-C9F04_RS02230;Dbxref=Genbank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9F04_RS02230;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	5342	6583	.	+	.	ID=gene-C9F04_RS02235;Name=C9F04_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02235;old_locus_tag=C9F04_02315
NZ_PYKF01000114.1	Protein Homology	CDS	5342	6583	.	+	0	ID=cds-WP_146712231.1;Parent=gene-C9F04_RS02235;Dbxref=Genbank:WP_146712231.1;Name=WP_146712231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9F04_RS02235;product=NAD(P)-dependent oxidoreductase;protein_id=WP_146712231.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	gene	6577	7812	.	+	.	ID=gene-C9F04_RS02240;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9F04_RS02240;old_locus_tag=C9F04_02320
NZ_PYKF01000114.1	Protein Homology	CDS	6577	7812	.	+	0	ID=cds-WP_080193537.1;Parent=gene-C9F04_RS02240;Dbxref=Genbank:WP_080193537.1;Name=WP_080193537.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F04_RS02240;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_080193537.1;transl_table=11
NZ_PYKF01000114.1	RefSeq	pseudogene	7887	8208	.	-	.	ID=gene-C9F04_RS02245;Name=mglC;end_range=8208,.;gbkey=Gene;gene=mglC;gene_biotype=pseudogene;locus_tag=C9F04_RS02245;old_locus_tag=C9F04_02325;partial=true;pseudo=true
NZ_PYKF01000114.1	Protein Homology	CDS	7887	8208	.	-	1	ID=cds-C9F04_RS02245;Parent=gene-C9F04_RS02245;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8208,.;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F04_RS02245;partial=true;product=beta-methylgalactoside transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000771.1 1 8200
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000771.1	RefSeq	region	1	8200	.	+	.	ID=NZ_PYKF01000771.1:1..8200;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000771.1	RefSeq	gene	1	328	.	+	.	ID=gene-C9F04_RS23920;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9F04_RS23920;old_locus_tag=C9F04_24730;partial=true;start_range=.,1
NZ_PYKF01000771.1	Protein Homology	CDS	1	328	.	+	1	ID=cds-WP_146713273.1;Parent=gene-C9F04_RS23920;Dbxref=Genbank:WP_146713273.1;Name=WP_146713273.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9F04_RS23920;partial=true;product=30S ribosomal protein S4;protein_id=WP_146713273.1;start_range=.,1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	354	1343	.	+	.	ID=gene-C9F04_RS23925;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=C9F04_RS23925;old_locus_tag=C9F04_24735
NZ_PYKF01000771.1	Protein Homology	CDS	354	1343	.	+	0	ID=cds-WP_001162094.1;Parent=gene-C9F04_RS23925;Dbxref=Genbank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9F04_RS23925;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	1384	1767	.	+	.	ID=gene-C9F04_RS23930;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9F04_RS23930;old_locus_tag=C9F04_24740
NZ_PYKF01000771.1	Protein Homology	CDS	1384	1767	.	+	0	ID=cds-WP_001216370.1;Parent=gene-C9F04_RS23930;Dbxref=Genbank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9F04_RS23930;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	1875	2243	.	+	.	ID=gene-C9F04_RS23935;Name=C9F04_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23935;old_locus_tag=C9F04_24745
NZ_PYKF01000771.1	Protein Homology	CDS	1875	2243	.	+	0	ID=cds-WP_146713274.1;Parent=gene-C9F04_RS23935;Dbxref=Genbank:WP_146713274.1;Name=WP_146713274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9F04_RS23935;product=DUF1992 domain-containing protein;protein_id=WP_146713274.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	2254	2679	.	+	.	ID=gene-C9F04_RS23940;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9F04_RS23940;old_locus_tag=C9F04_24750
NZ_PYKF01000771.1	Protein Homology	CDS	2254	2679	.	+	0	ID=cds-WP_000285585.1;Parent=gene-C9F04_RS23940;Dbxref=Genbank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9F04_RS23940;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	2737	3006	.	+	.	ID=gene-C9F04_RS23945;Name=C9F04_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23945;old_locus_tag=C9F04_24755
NZ_PYKF01000771.1	Protein Homology	CDS	2737	3006	.	+	0	ID=cds-WP_001538278.1;Parent=gene-C9F04_RS23945;Dbxref=Genbank:WP_001538278.1;Name=WP_001538278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092708.1;locus_tag=C9F04_RS23945;product=alternative ribosome-rescue factor A;protein_id=WP_001538278.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	2942	3355	.	-	.	ID=gene-C9F04_RS23950;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9F04_RS23950;old_locus_tag=C9F04_24760
NZ_PYKF01000771.1	Protein Homology	CDS	2942	3355	.	-	0	ID=cds-WP_000008119.1;Parent=gene-C9F04_RS23950;Dbxref=Genbank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9F04_RS23950;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	3497	4873	.	-	.	ID=gene-C9F04_RS23955;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9F04_RS23955;old_locus_tag=C9F04_24765
NZ_PYKF01000771.1	Protein Homology	CDS	3497	4873	.	-	0	ID=cds-WP_000691374.1;Parent=gene-C9F04_RS23955;Dbxref=Genbank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9F04_RS23955;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	4895	6184	.	-	.	ID=gene-C9F04_RS23960;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9F04_RS23960;old_locus_tag=C9F04_24770
NZ_PYKF01000771.1	Protein Homology	CDS	4895	6184	.	-	0	ID=cds-WP_146713275.1;Parent=gene-C9F04_RS23960;Dbxref=Genbank:WP_146713275.1;Name=WP_146713275.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9F04_RS23960;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_146713275.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	6236	7183	.	-	.	ID=gene-C9F04_RS23965;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9F04_RS23965;old_locus_tag=C9F04_24775
NZ_PYKF01000771.1	Protein Homology	CDS	6236	7183	.	-	0	ID=cds-WP_135369088.1;Parent=gene-C9F04_RS23965;Dbxref=Genbank:WP_135369088.1;Name=WP_135369088.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9F04_RS23965;product=methionyl-tRNA formyltransferase;protein_id=WP_135369088.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	7199	7708	.	-	.	ID=gene-C9F04_RS23970;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9F04_RS23970;old_locus_tag=C9F04_24780
NZ_PYKF01000771.1	Protein Homology	CDS	7199	7708	.	-	0	ID=cds-WP_000114987.1;Parent=gene-C9F04_RS23970;Dbxref=Genbank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9F04_RS23970;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11
NZ_PYKF01000771.1	RefSeq	gene	7840	8200	.	+	.	ID=gene-C9F04_RS23975;Name=C9F04_RS23975;end_range=8200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23975;old_locus_tag=C9F04_24785;partial=true
NZ_PYKF01000771.1	Protein Homology	CDS	7840	8200	.	+	0	ID=cds-WP_186799091.1;Parent=gene-C9F04_RS23975;Dbxref=Genbank:WP_186799091.1;Name=WP_186799091.1;Ontology_term=GO:0009294;end_range=8200,.;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9F04_RS23975;partial=true;product=DNA-processing protein DprA;protein_id=WP_186799091.1;transl_table=11
##sequence-region NZ_PYKF01000509.1 1 8160
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000509.1	RefSeq	region	1	8160	.	+	.	ID=NZ_PYKF01000509.1:1..8160;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000509.1	RefSeq	gene	1	1308	.	-	.	ID=gene-C9F04_RS15240;Name=C9F04_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15240;old_locus_tag=C9F04_15725;partial=true;start_range=.,1
NZ_PYKF01000509.1	Protein Homology	CDS	1	1308	.	-	0	ID=cds-WP_146712830.1;Parent=gene-C9F04_RS15240;Dbxref=Genbank:WP_146712830.1;Name=WP_146712830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9F04_RS15240;partial=true;product=APC family permease;protein_id=WP_146712830.1;start_range=.,1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	1399	2796	.	-	.	ID=gene-C9F04_RS15245;Name=C9F04_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15245;old_locus_tag=C9F04_15730
NZ_PYKF01000509.1	Protein Homology	CDS	1399	2796	.	-	0	ID=cds-WP_146712831.1;Parent=gene-C9F04_RS15245;Dbxref=Genbank:WP_146712831.1;Name=WP_146712831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9F04_RS15245;product=alanine racemase;protein_id=WP_146712831.1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	3007	4434	.	+	.	ID=gene-C9F04_RS15250;Name=C9F04_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15250;old_locus_tag=C9F04_15735
NZ_PYKF01000509.1	Protein Homology	CDS	3007	4434	.	+	0	ID=cds-WP_146712832.1;Parent=gene-C9F04_RS15250;Dbxref=Genbank:WP_146712832.1;Name=WP_146712832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9F04_RS15250;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_146712832.1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	4470	5987	.	-	.	ID=gene-C9F04_RS15255;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9F04_RS15255;old_locus_tag=C9F04_15740
NZ_PYKF01000509.1	Protein Homology	CDS	4470	5987	.	-	0	ID=cds-WP_146712833.1;Parent=gene-C9F04_RS15255;Dbxref=Genbank:WP_146712833.1;Name=WP_146712833.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F04_RS15255;product=amidophosphoribosyltransferase;protein_id=WP_146712833.1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	6025	6513	.	-	.	ID=gene-C9F04_RS15260;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9F04_RS15260;old_locus_tag=C9F04_15745
NZ_PYKF01000509.1	Protein Homology	CDS	6025	6513	.	-	0	ID=cds-WP_000262102.1;Parent=gene-C9F04_RS15260;Dbxref=Genbank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9F04_RS15260;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	6824	7498	.	-	.	ID=gene-C9F04_RS15265;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9F04_RS15265;old_locus_tag=C9F04_15750
NZ_PYKF01000509.1	Protein Homology	CDS	6824	7498	.	-	0	ID=cds-WP_146712834.1;Parent=gene-C9F04_RS15265;Dbxref=Genbank:WP_146712834.1;Name=WP_146712834.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9F04_RS15265;product=cell division protein DedD;protein_id=WP_146712834.1;transl_table=11
NZ_PYKF01000509.1	RefSeq	gene	7488	8160	.	-	.	ID=gene-C9F04_RS15270;Name=folC;end_range=8160,.;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9F04_RS15270;old_locus_tag=C9F04_15755;partial=true
NZ_PYKF01000509.1	Protein Homology	CDS	7488	8160	.	-	1	ID=cds-WP_146712835.1;Parent=gene-C9F04_RS15270;Dbxref=Genbank:WP_146712835.1;Name=WP_146712835.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;end_range=8160,.;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9F04_RS15270;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_146712835.1;transl_table=11
##sequence-region NZ_PYKF01000757.1 1 8146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000757.1	RefSeq	region	1	8146	.	+	.	ID=NZ_PYKF01000757.1:1..8146;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000757.1	RefSeq	pseudogene	58	312	.	+	.	ID=gene-C9F04_RS23520;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=pseudogene;locus_tag=C9F04_RS23520;old_locus_tag=C9F04_24300;partial=true;pseudo=true;start_range=.,58
NZ_PYKF01000757.1	Protein Homology	CDS	58	312	.	+	0	ID=cds-C9F04_RS23520;Parent=gene-C9F04_RS23520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9F04_RS23520;partial=true;product=flagellar export chaperone FlgN;pseudo=true;start_range=.,58;transl_table=11
NZ_PYKF01000757.1	RefSeq	pseudogene	394	1929	.	-	.	ID=gene-C9F04_RS23525;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=pseudogene;locus_tag=C9F04_RS23525;old_locus_tag=C9F04_24305;pseudo=true
NZ_PYKF01000757.1	Protein Homology	CDS	394	1929	.	-	0	ID=cds-C9F04_RS23525;Parent=gene-C9F04_RS23525;Note=internal stop;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9F04_RS23525;product=murein biosynthesis integral membrane protein MurJ;pseudo=true;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	2233	3156	.	-	.	ID=gene-C9F04_RS23530;Name=C9F04_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23530;old_locus_tag=C9F04_24310
NZ_PYKF01000757.1	Protein Homology	CDS	2233	3156	.	-	0	ID=cds-WP_135369041.1;Parent=gene-C9F04_RS23530;Dbxref=Genbank:WP_135369041.1;Name=WP_135369041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9F04_RS23530;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_135369041.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	3158	3805	.	-	.	ID=gene-C9F04_RS23535;Name=C9F04_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23535;old_locus_tag=C9F04_24315
NZ_PYKF01000757.1	Protein Homology	CDS	3158	3805	.	-	0	ID=cds-WP_000873047.1;Parent=gene-C9F04_RS23535;Dbxref=Genbank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9F04_RS23535;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	3841	4425	.	-	.	ID=gene-C9F04_RS23540;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9F04_RS23540;old_locus_tag=C9F04_24320
NZ_PYKF01000757.1	Protein Homology	CDS	3841	4425	.	-	0	ID=cds-WP_000468204.1;Parent=gene-C9F04_RS23540;Dbxref=Genbank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9F04_RS23540;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	4662	5870	.	+	.	ID=gene-C9F04_RS23545;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9F04_RS23545;old_locus_tag=C9F04_24325
NZ_PYKF01000757.1	Protein Homology	CDS	4662	5870	.	+	0	ID=cds-WP_146713256.1;Parent=gene-C9F04_RS23545;Dbxref=Genbank:WP_146713256.1;Name=WP_146713256.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F04_RS23545;product=multidrug efflux MFS transporter MdtH;protein_id=WP_146713256.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	5934	6581	.	+	.	ID=gene-C9F04_RS23550;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9F04_RS23550;old_locus_tag=C9F04_24330
NZ_PYKF01000757.1	Protein Homology	CDS	5934	6581	.	+	0	ID=cds-WP_146713257.1;Parent=gene-C9F04_RS23550;Dbxref=Genbank:WP_146713257.1;Name=WP_146713257.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9F04_RS23550;product=glutaredoxin 2;protein_id=WP_146713257.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	6706	7266	.	+	.	ID=gene-C9F04_RS23555;Name=C9F04_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23555;old_locus_tag=C9F04_24335
NZ_PYKF01000757.1	Protein Homology	CDS	6706	7266	.	+	0	ID=cds-WP_000713054.1;Parent=gene-C9F04_RS23555;Dbxref=Genbank:WP_000713054.1;Name=WP_000713054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9F04_RS23555;product=lipoprotein;protein_id=WP_000713054.1;transl_table=11
NZ_PYKF01000757.1	RefSeq	gene	7370	8146	.	+	.	ID=gene-C9F04_RS23560;Name=pyrC;end_range=8146,.;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9F04_RS23560;old_locus_tag=C9F04_24340;partial=true
NZ_PYKF01000757.1	Protein Homology	CDS	7370	8146	.	+	0	ID=cds-WP_146713258.1;Parent=gene-C9F04_RS23560;Dbxref=Genbank:WP_146713258.1;Name=WP_146713258.1;Ontology_term=GO:0009220,GO:0004151;end_range=8146,.;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9F04_RS23560;partial=true;product=dihydroorotase;protein_id=WP_146713258.1;transl_table=11
##sequence-region NZ_PYKF01000300.1 1 21105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000300.1	RefSeq	region	1	21105	.	+	.	ID=NZ_PYKF01000300.1:1..21105;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000300.1	RefSeq	pseudogene	1	846	.	-	.	ID=gene-C9F04_RS08725;Name=C9F04_RS08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08725;old_locus_tag=C9F04_09015;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000300.1	Protein Homology	CDS	1	846	.	-	0	ID=cds-C9F04_RS08725;Parent=gene-C9F04_RS08725;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9F04_RS08725;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	846	2480	.	-	.	ID=gene-C9F04_RS08730;Name=C9F04_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08730;old_locus_tag=C9F04_09020
NZ_PYKF01000300.1	Protein Homology	CDS	846	2480	.	-	0	ID=cds-WP_146712514.1;Parent=gene-C9F04_RS08730;Dbxref=Genbank:WP_146712514.1;Name=WP_146712514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9F04_RS08730;product=ABC transporter substrate-binding protein;protein_id=WP_146712514.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	3162	3476	.	+	.	ID=gene-C9F04_RS08735;Name=C9F04_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08735;old_locus_tag=C9F04_09025
NZ_PYKF01000300.1	Protein Homology	CDS	3162	3476	.	+	0	ID=cds-WP_000182479.1;Parent=gene-C9F04_RS08735;Dbxref=Genbank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9F04_RS08735;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	3625	4155	.	+	.	ID=gene-C9F04_RS08740;Name=C9F04_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08740;old_locus_tag=C9F04_09030
NZ_PYKF01000300.1	Protein Homology	CDS	3625	4155	.	+	0	ID=cds-WP_000929980.1;Parent=gene-C9F04_RS08740;Dbxref=Genbank:WP_000929980.1;Name=WP_000929980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9F04_RS08740;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	4237	5280	.	-	.	ID=gene-C9F04_RS08745;Name=C9F04_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08745;old_locus_tag=C9F04_09035
NZ_PYKF01000300.1	Protein Homology	CDS	4237	5280	.	-	0	ID=cds-WP_135369591.1;Parent=gene-C9F04_RS08745;Dbxref=Genbank:WP_135369591.1;Name=WP_135369591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9F04_RS08745;product=exo-alpha-sialidase;protein_id=WP_135369591.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	5619	6086	.	-	.	ID=gene-C9F04_RS08750;Name=C9F04_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08750;old_locus_tag=C9F04_09040
NZ_PYKF01000300.1	Protein Homology	CDS	5619	6086	.	-	0	ID=cds-WP_001218120.1;Parent=gene-C9F04_RS08750;Dbxref=Genbank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9F04_RS08750;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	6238	6510	.	-	.	ID=gene-C9F04_RS08755;Name=C9F04_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08755;old_locus_tag=C9F04_09045
NZ_PYKF01000300.1	Protein Homology	CDS	6238	6510	.	-	0	ID=cds-WP_135369590.1;Parent=gene-C9F04_RS08755;Dbxref=Genbank:WP_135369590.1;Name=WP_135369590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9F04_RS08755;product=hypothetical protein;protein_id=WP_135369590.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	7213	7557	.	+	.	ID=gene-C9F04_RS08765;Name=C9F04_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08765;old_locus_tag=C9F04_09055
NZ_PYKF01000300.1	Protein Homology	CDS	7213	7557	.	+	0	ID=cds-WP_000977725.1;Parent=gene-C9F04_RS08765;Dbxref=Genbank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9F04_RS08765;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	8312	8388	.	-	.	ID=gene-C9F04_RS08770;Name=C9F04_RS08770;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS08770;old_locus_tag=C9F04_09060
NZ_PYKF01000300.1	tRNAscan-SE	tRNA	8312	8388	.	-	.	ID=rna-C9F04_RS08770;Parent=gene-C9F04_RS08770;anticodon=(pos:complement(8352..8354));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS08770;product=tRNA-Arg
NZ_PYKF01000300.1	tRNAscan-SE	exon	8312	8388	.	-	.	ID=exon-C9F04_RS08770-1;Parent=rna-C9F04_RS08770;anticodon=(pos:complement(8352..8354));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS08770;product=tRNA-Arg
NZ_PYKF01000300.1	RefSeq	gene	8779	9336	.	-	.	ID=gene-C9F04_RS08775;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9F04_RS08775;old_locus_tag=C9F04_09065
NZ_PYKF01000300.1	Protein Homology	CDS	8779	9336	.	-	0	ID=cds-WP_023226910.1;Parent=gene-C9F04_RS08775;Dbxref=Genbank:WP_023226910.1;Name=WP_023226910.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9F04_RS08775;product=virulence membrane protein PagC;protein_id=WP_023226910.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	10142	10405	.	+	.	ID=gene-C9F04_RS08785;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9F04_RS08785;old_locus_tag=C9F04_09075
NZ_PYKF01000300.1	Protein Homology	CDS	10142	10405	.	+	0	ID=cds-WP_024148167.1;Parent=gene-C9F04_RS08785;Dbxref=Genbank:WP_024148167.1;Name=WP_024148167.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9F04_RS08785;product=virulence protein PagD;protein_id=WP_024148167.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	10537	10749	.	+	.	ID=gene-C9F04_RS08790;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9F04_RS08790;old_locus_tag=C9F04_09080
NZ_PYKF01000300.1	Protein Homology	CDS	10537	10749	.	+	0	ID=cds-WP_001537306.1;Parent=gene-C9F04_RS08790;Dbxref=Genbank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9F04_RS08790;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	11166	11687	.	+	.	ID=gene-C9F04_RS08795;Name=C9F04_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08795;old_locus_tag=C9F04_09085
NZ_PYKF01000300.1	Protein Homology	CDS	11166	11687	.	+	0	ID=cds-WP_001589112.1;Parent=gene-C9F04_RS08795;Dbxref=Genbank:WP_001589112.1;Name=WP_001589112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9F04_RS08795;product=RICIN domain-containing protein;protein_id=WP_001589112.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	11868	12107	.	+	.	ID=gene-C9F04_RS08800;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9F04_RS08800;old_locus_tag=C9F04_09090
NZ_PYKF01000300.1	Protein Homology	CDS	11868	12107	.	+	0	ID=cds-WP_000497451.1;Parent=gene-C9F04_RS08800;Dbxref=Genbank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9F04_RS08800;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	12597	13385	.	+	.	ID=gene-C9F04_RS08805;Name=C9F04_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08805;old_locus_tag=C9F04_09100
NZ_PYKF01000300.1	Protein Homology	CDS	12597	13385	.	+	0	ID=cds-WP_039590712.1;Parent=gene-C9F04_RS08805;Dbxref=Genbank:WP_039590712.1;Name=WP_039590712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9F04_RS08805;product=hypothetical protein;protein_id=WP_039590712.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	13707	13919	.	+	.	ID=gene-C9F04_RS26990;Name=C9F04_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26990;old_locus_tag=C9F04_09105
NZ_PYKF01000300.1	Protein Homology	CDS	13707	13919	.	+	0	ID=cds-WP_135369589.1;Parent=gene-C9F04_RS26990;Dbxref=Genbank:WP_135369589.1;Name=WP_135369589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787630.1;locus_tag=C9F04_RS26990;product=hypothetical protein;protein_id=WP_135369589.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	pseudogene	14101	14175	.	+	.	ID=gene-C9F04_RS08815;Name=C9F04_RS08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08815;old_locus_tag=C9F04_09110;partial=true;pseudo=true;start_range=.,14101
NZ_PYKF01000300.1	Protein Homology	CDS	14101	14175	.	+	0	ID=cds-C9F04_RS08815;Parent=gene-C9F04_RS08815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461632.1;locus_tag=C9F04_RS08815;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,14101;transl_table=11
NZ_PYKF01000300.1	RefSeq	pseudogene	14570	14752	.	+	.	ID=gene-C9F04_RS08820;Name=C9F04_RS08820;end_range=14752,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08820;old_locus_tag=C9F04_09115;partial=true;pseudo=true
NZ_PYKF01000300.1	Protein Homology	CDS	14570	14752	.	+	0	ID=cds-C9F04_RS08820;Parent=gene-C9F04_RS08820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539657.1;locus_tag=C9F04_RS08820;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	15045	16169	.	-	.	ID=gene-C9F04_RS08830;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9F04_RS08830;old_locus_tag=C9F04_09125
NZ_PYKF01000300.1	Protein Homology	CDS	15045	16169	.	-	0	ID=cds-WP_135369588.1;Parent=gene-C9F04_RS08830;Dbxref=Genbank:WP_135369588.1;Name=WP_135369588.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9F04_RS08830;product=type III secretion system effector SopF;protein_id=WP_135369588.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	pseudogene	16629	16796	.	-	.	ID=gene-C9F04_RS08835;Name=C9F04_RS08835;end_range=16796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08835;old_locus_tag=C9F04_09130;partial=true;pseudo=true
NZ_PYKF01000300.1	Protein Homology	CDS	16629	16796	.	-	0	ID=cds-C9F04_RS08835;Parent=gene-C9F04_RS08835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;end_range=16796,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F04_RS08835;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	17095	17766	.	+	.	ID=gene-C9F04_RS08840;Name=C9F04_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08840;old_locus_tag=C9F04_09135
NZ_PYKF01000300.1	Protein Homology	CDS	17095	17766	.	+	0	ID=cds-WP_146712515.1;Parent=gene-C9F04_RS08840;Dbxref=Genbank:WP_146712515.1;Name=WP_146712515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807727.1;locus_tag=C9F04_RS08840;product=SOS response-associated peptidase;protein_id=WP_146712515.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	17785	18255	.	+	.	ID=gene-C9F04_RS08845;Name=C9F04_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08845;old_locus_tag=C9F04_09140
NZ_PYKF01000300.1	Protein Homology	CDS	17785	18255	.	+	0	ID=cds-WP_134949631.1;Parent=gene-C9F04_RS08845;Dbxref=Genbank:WP_134949631.1;Name=WP_134949631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000374058.1;locus_tag=C9F04_RS08845;product=hypothetical protein;protein_id=WP_134949631.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	18228	19496	.	-	.	ID=gene-C9F04_RS08850;Name=C9F04_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08850;old_locus_tag=C9F04_09145
NZ_PYKF01000300.1	Protein Homology	CDS	18228	19496	.	-	0	ID=cds-WP_135369587.1;Parent=gene-C9F04_RS08850;Dbxref=Genbank:WP_135369587.1;Name=WP_135369587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=C9F04_RS08850;product=Y-family DNA polymerase;protein_id=WP_135369587.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	19498	19917	.	-	.	ID=gene-C9F04_RS08855;Name=C9F04_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08855;old_locus_tag=C9F04_09150
NZ_PYKF01000300.1	Protein Homology	CDS	19498	19917	.	-	0	ID=cds-WP_080198126.1;Parent=gene-C9F04_RS08855;Dbxref=Genbank:WP_080198126.1;Name=WP_080198126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784491.1;locus_tag=C9F04_RS08855;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_080198126.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	19995	20237	.	+	.	ID=gene-C9F04_RS08860;Name=C9F04_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08860;old_locus_tag=C9F04_09155
NZ_PYKF01000300.1	Protein Homology	CDS	19995	20237	.	+	0	ID=cds-WP_080198125.1;Parent=gene-C9F04_RS08860;Dbxref=Genbank:WP_080198125.1;Name=WP_080198125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497451.1;locus_tag=C9F04_RS08860;product=DinI family protein;protein_id=WP_080198125.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	gene	20312	20830	.	-	.	ID=gene-C9F04_RS08865;Name=C9F04_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08865;old_locus_tag=C9F04_09160
NZ_PYKF01000300.1	Protein Homology	CDS	20312	20830	.	-	0	ID=cds-WP_080198124.1;Parent=gene-C9F04_RS08865;Dbxref=Genbank:WP_080198124.1;Name=WP_080198124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675316.1;locus_tag=C9F04_RS08865;product=tail fiber assembly protein;protein_id=WP_080198124.1;transl_table=11
NZ_PYKF01000300.1	RefSeq	pseudogene	20833	21105	.	-	.	ID=gene-C9F04_RS08870;Name=C9F04_RS08870;end_range=21105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08870;old_locus_tag=C9F04_09165;partial=true;pseudo=true
NZ_PYKF01000300.1	Protein Homology	CDS	20833	21105	.	-	0	ID=cds-C9F04_RS08870;Parent=gene-C9F04_RS08870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=21105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F04_RS08870;partial=true;product=phage tail protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000350.1 1 8092
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000350.1	RefSeq	region	1	8092	.	+	.	ID=NZ_PYKF01000350.1:1..8092;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000350.1	RefSeq	gene	1	113	.	-	.	ID=gene-C9F04_RS10300;Name=C9F04_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10300;old_locus_tag=C9F04_10630;partial=true;start_range=.,1
NZ_PYKF01000350.1	Protein Homology	CDS	1	113	.	-	0	ID=cds-WP_001710386.1;Parent=gene-C9F04_RS10300;Dbxref=Genbank:WP_001710386.1;Name=WP_001710386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9F04_RS10300;partial=true;product=4Fe-4S binding protein;protein_id=WP_001710386.1;start_range=.,1;transl_table=11
NZ_PYKF01000350.1	RefSeq	gene	124	2568	.	-	.	ID=gene-C9F04_RS10305;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9F04_RS10305;old_locus_tag=C9F04_10635
NZ_PYKF01000350.1	Protein Homology	CDS	124	2568	.	-	0	ID=cds-WP_023209544.1;Parent=gene-C9F04_RS10305;Dbxref=Genbank:WP_023209544.1;Name=WP_023209544.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9F04_RS10305;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023209544.1;transl_table=11
NZ_PYKF01000350.1	RefSeq	gene	2804	4096	.	-	.	ID=gene-C9F04_RS10310;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9F04_RS10310;old_locus_tag=C9F04_10640
NZ_PYKF01000350.1	Protein Homology	CDS	2804	4096	.	-	0	ID=cds-WP_146712597.1;Parent=gene-C9F04_RS10310;Dbxref=Genbank:WP_146712597.1;Name=WP_146712597.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9F04_RS10310;product=serine--tRNA ligase;protein_id=WP_146712597.1;transl_table=11
NZ_PYKF01000350.1	RefSeq	gene	4355	5698	.	-	.	ID=gene-C9F04_RS10315;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9F04_RS10315;old_locus_tag=C9F04_10645
NZ_PYKF01000350.1	Protein Homology	CDS	4355	5698	.	-	0	ID=cds-WP_000067785.1;Parent=gene-C9F04_RS10315;Dbxref=Genbank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9F04_RS10315;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11
NZ_PYKF01000350.1	RefSeq	gene	5708	6319	.	-	.	ID=gene-C9F04_RS10320;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9F04_RS10320;old_locus_tag=C9F04_10650
NZ_PYKF01000350.1	Protein Homology	CDS	5708	6319	.	-	0	ID=cds-WP_001519746.1;Parent=gene-C9F04_RS10320;Dbxref=Genbank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9F04_RS10320;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11
NZ_PYKF01000350.1	RefSeq	pseudogene	6462	8092	.	-	.	ID=gene-C9F04_RS10325;Name=ftsK;end_range=8092,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=C9F04_RS10325;old_locus_tag=C9F04_10655;partial=true;pseudo=true
NZ_PYKF01000350.1	Protein Homology	CDS	6462	8092	.	-	2	ID=cds-C9F04_RS10325;Parent=gene-C9F04_RS10325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8092,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F04_RS10325;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000752.1 1 7985
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000752.1	RefSeq	region	1	7985	.	+	.	ID=NZ_PYKF01000752.1:1..7985;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000752.1	RefSeq	gene	1	1001	.	-	.	ID=gene-C9F04_RS23315;Name=C9F04_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23315;old_locus_tag=C9F04_24095;partial=true;start_range=.,1
NZ_PYKF01000752.1	Protein Homology	CDS	1	1001	.	-	0	ID=cds-WP_186799088.1;Parent=gene-C9F04_RS23315;Dbxref=Genbank:WP_186799088.1;Name=WP_186799088.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=C9F04_RS23315;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_186799088.1;start_range=.,1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	1155	1463	.	-	.	ID=gene-C9F04_RS23320;Name=C9F04_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23320;old_locus_tag=C9F04_24100
NZ_PYKF01000752.1	Protein Homology	CDS	1155	1463	.	-	0	ID=cds-WP_000975516.1;Parent=gene-C9F04_RS23320;Dbxref=Genbank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9F04_RS23320;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	pseudogene	1567	2276	.	+	.	ID=gene-C9F04_RS23325;Name=C9F04_RS23325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23325;old_locus_tag=C9F04_24105;pseudo=true
NZ_PYKF01000752.1	Protein Homology	CDS	1567	2276	.	+	0	ID=cds-C9F04_RS23325;Parent=gene-C9F04_RS23325;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9F04_RS23325;product=YnfC family lipoprotein;pseudo=true;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	2317	2877	.	-	.	ID=gene-C9F04_RS23330;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9F04_RS23330;old_locus_tag=C9F04_24110
NZ_PYKF01000752.1	Protein Homology	CDS	2317	2877	.	-	0	ID=cds-WP_000199997.1;Parent=gene-C9F04_RS23330;Dbxref=Genbank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9F04_RS23330;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	2913	3254	.	-	.	ID=gene-C9F04_RS23335;Name=C9F04_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23335;old_locus_tag=C9F04_24115
NZ_PYKF01000752.1	Protein Homology	CDS	2913	3254	.	-	0	ID=cds-WP_001066440.1;Parent=gene-C9F04_RS23335;Dbxref=Genbank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9F04_RS23335;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	3406	3732	.	+	.	ID=gene-C9F04_RS23340;Name=C9F04_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23340;old_locus_tag=C9F04_24120
NZ_PYKF01000752.1	Protein Homology	CDS	3406	3732	.	+	0	ID=cds-WP_000921389.1;Parent=gene-C9F04_RS23340;Dbxref=Genbank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9F04_RS23340;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	3854	5068	.	+	.	ID=gene-C9F04_RS23345;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9F04_RS23345;old_locus_tag=C9F04_24125
NZ_PYKF01000752.1	Protein Homology	CDS	3854	5068	.	+	0	ID=cds-WP_135369113.1;Parent=gene-C9F04_RS23345;Dbxref=Genbank:WP_135369113.1;Name=WP_135369113.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9F04_RS23345;product=starvation-sensing protein RspA;protein_id=WP_135369113.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	5079	6098	.	+	.	ID=gene-C9F04_RS23350;Name=C9F04_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23350;old_locus_tag=C9F04_24130
NZ_PYKF01000752.1	Protein Homology	CDS	5079	6098	.	+	0	ID=cds-WP_146713251.1;Parent=gene-C9F04_RS23350;Dbxref=Genbank:WP_146713251.1;Name=WP_146713251.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9F04_RS23350;product=Zn-dependent oxidoreductase;protein_id=WP_146713251.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	gene	6152	7531	.	+	.	ID=gene-C9F04_RS23355;Name=C9F04_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23355;old_locus_tag=C9F04_24135
NZ_PYKF01000752.1	Protein Homology	CDS	6152	7531	.	+	0	ID=cds-WP_146713252.1;Parent=gene-C9F04_RS23355;Dbxref=Genbank:WP_146713252.1;Name=WP_146713252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9F04_RS23355;product=MHS family MFS transporter;protein_id=WP_146713252.1;transl_table=11
NZ_PYKF01000752.1	RefSeq	pseudogene	7675	7985	.	+	.	ID=gene-C9F04_RS23360;Name=C9F04_RS23360;end_range=7985,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23360;old_locus_tag=C9F04_24140;partial=true;pseudo=true
NZ_PYKF01000752.1	Protein Homology	CDS	7675	7985	.	+	0	ID=cds-C9F04_RS23360;Parent=gene-C9F04_RS23360;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=C9F04_RS23360;partial=true;product=D-mannonate oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000077.1 1 8030
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000077.1	RefSeq	region	1	8030	.	+	.	ID=NZ_PYKF01000077.1:1..8030;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000077.1	RefSeq	gene	141	1121	.	-	.	ID=gene-C9F04_RS01530;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9F04_RS01530;old_locus_tag=C9F04_01600
NZ_PYKF01000077.1	Protein Homology	CDS	141	1121	.	-	0	ID=cds-WP_000874176.1;Parent=gene-C9F04_RS01530;Dbxref=Genbank:WP_000874176.1;Name=WP_000874176.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9F04_RS01530;product=tRNA-modifying protein YgfZ;protein_id=WP_000874176.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	1371	1637	.	+	.	ID=gene-C9F04_RS01540;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9F04_RS01540;old_locus_tag=C9F04_01610
NZ_PYKF01000077.1	Protein Homology	CDS	1371	1637	.	+	0	ID=cds-WP_000351186.1;Parent=gene-C9F04_RS01540;Dbxref=Genbank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9F04_RS01540;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	1618	2031	.	+	.	ID=gene-C9F04_RS01545;Name=C9F04_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01545;old_locus_tag=C9F04_01615
NZ_PYKF01000077.1	Protein Homology	CDS	1618	2031	.	+	0	ID=cds-WP_000244756.1;Parent=gene-C9F04_RS01545;Dbxref=Genbank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9F04_RS01545;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	2084	2605	.	-	.	ID=gene-C9F04_RS01550;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9F04_RS01550;old_locus_tag=C9F04_01620
NZ_PYKF01000077.1	Protein Homology	CDS	2084	2605	.	-	0	ID=cds-WP_001055885.1;Parent=gene-C9F04_RS01550;Dbxref=Genbank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9F04_RS01550;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	2718	3614	.	+	.	ID=gene-C9F04_RS01555;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9F04_RS01555;old_locus_tag=C9F04_01625
NZ_PYKF01000077.1	Protein Homology	CDS	2718	3614	.	+	0	ID=cds-WP_000434302.1;Parent=gene-C9F04_RS01555;Dbxref=Genbank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9F04_RS01555;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	3638	4351	.	+	.	ID=gene-C9F04_RS01560;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9F04_RS01560;old_locus_tag=C9F04_01630
NZ_PYKF01000077.1	Protein Homology	CDS	3638	4351	.	+	0	ID=cds-WP_000745614.1;Parent=gene-C9F04_RS01560;Dbxref=Genbank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9F04_RS01560;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	4357	6090	.	+	.	ID=gene-C9F04_RS01565;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9F04_RS01565;old_locus_tag=C9F04_01635
NZ_PYKF01000077.1	Protein Homology	CDS	4357	6090	.	+	0	ID=cds-WP_146712196.1;Parent=gene-C9F04_RS01565;Dbxref=Genbank:WP_146712196.1;Name=WP_146712196.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9F04_RS01565;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_146712196.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	6195	7293	.	+	.	ID=gene-C9F04_RS01570;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9F04_RS01570;old_locus_tag=C9F04_01640
NZ_PYKF01000077.1	Protein Homology	CDS	6195	6269	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9F04_RS01570;Dbxref=Genbank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9F04_RS01570;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKF01000077.1	Protein Homology	CDS	6271	7293	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9F04_RS01570;Dbxref=Genbank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9F04_RS01570;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKF01000077.1	RefSeq	gene	7303	8030	.	+	.	ID=gene-C9F04_RS01575;Name=C9F04_RS01575;end_range=8030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01575;old_locus_tag=C9F04_01645;partial=true
NZ_PYKF01000077.1	Protein Homology	CDS	7303	8030	.	+	0	ID=cds-WP_261770730.1;Parent=gene-C9F04_RS01575;Dbxref=Genbank:WP_261770730.1;Name=WP_261770730.1;Ontology_term=GO:0003676;end_range=8030,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9F04_RS01575;partial=true;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_261770730.1;transl_table=11
##sequence-region NZ_PYKF01000595.1 1 8006
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000595.1	RefSeq	region	1	8006	.	+	.	ID=NZ_PYKF01000595.1:1..8006;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000595.1	RefSeq	gene	1	532	.	+	.	ID=gene-C9F04_RS17705;Name=C9F04_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17705;old_locus_tag=C9F04_18265;partial=true;start_range=.,1
NZ_PYKF01000595.1	Protein Homology	CDS	1	532	.	+	1	ID=cds-WP_146712964.1;Parent=gene-C9F04_RS17705;Dbxref=Genbank:WP_146712964.1;Name=WP_146712964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=C9F04_RS17705;partial=true;product=c-type cytochrome biogenesis protein;protein_id=WP_146712964.1;start_range=.,1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	576	1223	.	-	.	ID=gene-C9F04_RS17710;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9F04_RS17710;old_locus_tag=C9F04_18270
NZ_PYKF01000595.1	Protein Homology	CDS	576	1223	.	-	0	ID=cds-WP_001115498.1;Parent=gene-C9F04_RS17710;Dbxref=Genbank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9F04_RS17710;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	2041	2604	.	+	.	ID=gene-C9F04_RS17720;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9F04_RS17720;old_locus_tag=C9F04_18285
NZ_PYKF01000595.1	Protein Homology	CDS	2041	2604	.	+	0	ID=cds-WP_077950732.1;Parent=gene-C9F04_RS17720;Dbxref=Genbank:WP_077950732.1;Name=WP_077950732.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9F04_RS17720;product=lipid A 3-O-deacylase PagL;protein_id=WP_077950732.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	2796	2984	.	-	.	ID=gene-C9F04_RS17725;Name=C9F04_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17725;old_locus_tag=C9F04_18290
NZ_PYKF01000595.1	Protein Homology	CDS	2796	2984	.	-	0	ID=cds-WP_001142121.1;Parent=gene-C9F04_RS17725;Dbxref=Genbank:WP_001142121.1;Name=WP_001142121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9F04_RS17725;product=hypothetical protein;protein_id=WP_001142121.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	pseudogene	2978	3070	.	-	.	ID=gene-C9F04_RS27140;Name=C9F04_RS27140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27140;partial=true;pseudo=true;start_range=.,2978
NZ_PYKF01000595.1	Protein Homology	CDS	2978	3070	.	-	0	ID=cds-C9F04_RS27140;Parent=gene-C9F04_RS27140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=C9F04_RS27140;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2978;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	3026	3102	.	-	.	ID=gene-C9F04_RS17730;Name=C9F04_RS17730;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS17730;old_locus_tag=C9F04_18295
NZ_PYKF01000595.1	tRNAscan-SE	tRNA	3026	3102	.	-	.	ID=rna-C9F04_RS17730;Parent=gene-C9F04_RS17730;anticodon=(pos:complement(3066..3068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17730;product=tRNA-Pro
NZ_PYKF01000595.1	tRNAscan-SE	exon	3026	3102	.	-	.	ID=exon-C9F04_RS17730-1;Parent=rna-C9F04_RS17730;anticodon=(pos:complement(3066..3068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17730;product=tRNA-Pro
NZ_PYKF01000595.1	RefSeq	gene	3176	4936	.	-	.	ID=gene-C9F04_RS17735;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9F04_RS17735;old_locus_tag=C9F04_18300
NZ_PYKF01000595.1	Protein Homology	CDS	3176	4936	.	-	0	ID=cds-WP_135369178.1;Parent=gene-C9F04_RS17735;Dbxref=Genbank:WP_135369178.1;Name=WP_135369178.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9F04_RS17735;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_135369178.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	4968	5195	.	-	.	ID=gene-C9F04_RS17740;Name=C9F04_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17740;old_locus_tag=C9F04_18305
NZ_PYKF01000595.1	Protein Homology	CDS	4968	5195	.	-	0	ID=cds-WP_001135904.1;Parent=gene-C9F04_RS17740;Dbxref=Genbank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9F04_RS17740;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	5375	6382	.	+	.	ID=gene-C9F04_RS17745;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9F04_RS17745;old_locus_tag=C9F04_18310
NZ_PYKF01000595.1	Protein Homology	CDS	5375	6382	.	+	0	ID=cds-WP_000050805.1;Parent=gene-C9F04_RS17745;Dbxref=Genbank:WP_000050805.1;Name=WP_000050805.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9F04_RS17745;product=nucleoid-associated protein YejK;protein_id=WP_000050805.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	6410	7030	.	+	.	ID=gene-C9F04_RS17750;Name=C9F04_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17750;old_locus_tag=C9F04_18315
NZ_PYKF01000595.1	Protein Homology	CDS	6410	7030	.	+	0	ID=cds-WP_135369179.1;Parent=gene-C9F04_RS17750;Dbxref=Genbank:WP_135369179.1;Name=WP_135369179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9F04_RS17750;product=hypothetical protein;protein_id=WP_135369179.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	gene	7139	7423	.	-	.	ID=gene-C9F04_RS17755;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9F04_RS17755;old_locus_tag=C9F04_18320
NZ_PYKF01000595.1	Protein Homology	CDS	7139	7423	.	-	0	ID=cds-WP_000494192.1;Parent=gene-C9F04_RS17755;Dbxref=Genbank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9F04_RS17755;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11
NZ_PYKF01000595.1	RefSeq	pseudogene	7548	7982	.	-	.	ID=gene-C9F04_RS17760;Name=C9F04_RS17760;end_range=7982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17760;old_locus_tag=C9F04_18325;partial=true;pseudo=true
NZ_PYKF01000595.1	Protein Homology	CDS	7548	7982	.	-	0	ID=cds-C9F04_RS17760;Parent=gene-C9F04_RS17760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9F04_RS17760;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000537.1 1 7878
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000537.1	RefSeq	region	1	7878	.	+	.	ID=NZ_PYKF01000537.1:1..7878;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000537.1	RefSeq	pseudogene	1	587	.	-	.	ID=gene-C9F04_RS16040;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=C9F04_RS16040;old_locus_tag=C9F04_16540;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000537.1	Protein Homology	CDS	1	587	.	-	0	ID=cds-C9F04_RS16040;Parent=gene-C9F04_RS16040;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9F04_RS16040;partial=true;product=recombinase RecA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	672	1169	.	-	.	ID=gene-C9F04_RS16045;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9F04_RS16045;old_locus_tag=C9F04_16545
NZ_PYKF01000537.1	Protein Homology	CDS	672	1169	.	-	0	ID=cds-WP_010835022.1;Parent=gene-C9F04_RS16045;Dbxref=Genbank:WP_010835022.1;Name=WP_010835022.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9F04_RS16045;product=nicotinamide-nucleotide amidase;protein_id=WP_010835022.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	1365	1610	.	+	.	ID=gene-C9F04_RS27130;Name=C9F04_RS27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27130;old_locus_tag=C9F04_16550
NZ_PYKF01000537.1	Protein Homology	CDS	1365	1610	.	+	0	ID=cds-WP_021000688.1;Parent=gene-C9F04_RS27130;Dbxref=Genbank:WP_021000688.1;Name=WP_021000688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9F04_RS27130;product=hypothetical protein;protein_id=WP_021000688.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	1647	2726	.	-	.	ID=gene-C9F04_RS16055;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9F04_RS16055;old_locus_tag=C9F04_16555
NZ_PYKF01000537.1	Protein Homology	CDS	1647	2726	.	-	0	ID=cds-WP_000476828.1;Parent=gene-C9F04_RS16055;Dbxref=Genbank:WP_000476828.1;Name=WP_000476828.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9F04_RS16055;product=lytic murein transglycosylase B;protein_id=WP_000476828.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	2979	3542	.	+	.	ID=gene-C9F04_RS16060;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=C9F04_RS16060;old_locus_tag=C9F04_16560
NZ_PYKF01000537.1	Protein Homology	CDS	2979	3542	.	+	0	ID=cds-WP_000573335.1;Parent=gene-C9F04_RS16060;Dbxref=Genbank:WP_000573335.1;Name=WP_000573335.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9F04_RS16060;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	3539	4510	.	+	.	ID=gene-C9F04_RS16065;Name=C9F04_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16065;old_locus_tag=C9F04_16565
NZ_PYKF01000537.1	Protein Homology	CDS	3539	4510	.	+	0	ID=cds-WP_146712872.1;Parent=gene-C9F04_RS16065;Dbxref=Genbank:WP_146712872.1;Name=WP_146712872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9F04_RS16065;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_146712872.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	4522	4884	.	+	.	ID=gene-C9F04_RS16070;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=C9F04_RS16070;old_locus_tag=C9F04_16570
NZ_PYKF01000537.1	Protein Homology	CDS	4522	4884	.	+	0	ID=cds-WP_000111553.1;Parent=gene-C9F04_RS16070;Dbxref=Genbank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9F04_RS16070;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	4896	5675	.	+	.	ID=gene-C9F04_RS16075;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9F04_RS16075;old_locus_tag=C9F04_16575
NZ_PYKF01000537.1	Protein Homology	CDS	4896	5675	.	+	0	ID=cds-WP_001077372.1;Parent=gene-C9F04_RS16075;Dbxref=Genbank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9F04_RS16075;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	5751	6110	.	+	.	ID=gene-C9F04_RS16080;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9F04_RS16080;old_locus_tag=C9F04_16580
NZ_PYKF01000537.1	Protein Homology	CDS	5751	6110	.	+	0	ID=cds-WP_000255198.1;Parent=gene-C9F04_RS16080;Dbxref=Genbank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9F04_RS16080;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	6308	7081	.	+	.	ID=gene-C9F04_RS16085;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9F04_RS16085;old_locus_tag=C9F04_16585
NZ_PYKF01000537.1	Protein Homology	CDS	6308	7081	.	+	0	ID=cds-WP_000804536.1;Parent=gene-C9F04_RS16085;Dbxref=Genbank:WP_000804536.1;Name=WP_000804536.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9F04_RS16085;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11
NZ_PYKF01000537.1	RefSeq	gene	7074	7878	.	+	.	ID=gene-C9F04_RS16090;Name=C9F04_RS16090;end_range=7878,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16090;old_locus_tag=C9F04_16590;partial=true
NZ_PYKF01000537.1	Protein Homology	CDS	7074	7878	.	+	0	ID=cds-WP_261771291.1;Parent=gene-C9F04_RS16090;Dbxref=Genbank:WP_261771291.1;Name=WP_261771291.1;Ontology_term=GO:0005975,GO:0016853;end_range=7878,.;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818575.1;locus_tag=C9F04_RS16090;partial=true;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_261771291.1;transl_table=11
##sequence-region NZ_PYKF01000800.1 1 7865
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000800.1	RefSeq	region	1	7865	.	+	.	ID=NZ_PYKF01000800.1:1..7865;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000800.1	RefSeq	gene	230	1579	.	+	.	ID=gene-C9F04_RS24930;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9F04_RS24930;old_locus_tag=C9F04_25790
NZ_PYKF01000800.1	Protein Homology	CDS	230	1579	.	+	0	ID=cds-WP_146713329.1;Parent=gene-C9F04_RS24930;Dbxref=Genbank:WP_146713329.1;Name=WP_146713329.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9F04_RS24930;product=lysine-sensitive aspartokinase 3;protein_id=WP_146713329.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	1710	2057	.	-	.	ID=gene-C9F04_RS24935;Name=C9F04_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24935;old_locus_tag=C9F04_25795
NZ_PYKF01000800.1	Protein Homology	CDS	1710	2057	.	-	0	ID=cds-WP_000615248.1;Parent=gene-C9F04_RS24935;Dbxref=Genbank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9F04_RS24935;product=DNA-binding protein;protein_id=WP_000615248.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	2634	2921	.	+	.	ID=gene-C9F04_RS24940;Name=C9F04_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24940;old_locus_tag=C9F04_25800
NZ_PYKF01000800.1	Protein Homology	CDS	2634	2921	.	+	0	ID=cds-WP_001226439.1;Parent=gene-C9F04_RS24940;Dbxref=Genbank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9F04_RS24940;product=putative holin;protein_id=WP_001226439.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	2924	3529	.	+	.	ID=gene-C9F04_RS24945;Name=C9F04_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24945;old_locus_tag=C9F04_25805
NZ_PYKF01000800.1	Protein Homology	CDS	2924	3529	.	+	0	ID=cds-WP_135369167.1;Parent=gene-C9F04_RS24945;Dbxref=Genbank:WP_135369167.1;Name=WP_135369167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9F04_RS24945;product=lytic transglycosylase domain-containing protein;protein_id=WP_135369167.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	3542	3856	.	+	.	ID=gene-C9F04_RS24950;Name=C9F04_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24950;old_locus_tag=C9F04_25810
NZ_PYKF01000800.1	Protein Homology	CDS	3542	3856	.	+	0	ID=cds-WP_000777267.1;Parent=gene-C9F04_RS24950;Dbxref=Genbank:WP_000777267.1;Name=WP_000777267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9F04_RS24950;product=hypothetical protein;protein_id=WP_000777267.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	4016	4471	.	+	.	ID=gene-C9F04_RS24955;Name=C9F04_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24955;old_locus_tag=C9F04_25815
NZ_PYKF01000800.1	Protein Homology	CDS	4016	4471	.	+	0	ID=cds-WP_000449434.1;Parent=gene-C9F04_RS24955;Dbxref=Genbank:WP_000449434.1;Name=WP_000449434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9F04_RS24955;product=Gp37 family protein;protein_id=WP_000449434.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	4468	4665	.	+	.	ID=gene-C9F04_RS24960;Name=C9F04_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24960;old_locus_tag=C9F04_25820
NZ_PYKF01000800.1	Protein Homology	CDS	4468	4665	.	+	0	ID=cds-WP_000875314.1;Parent=gene-C9F04_RS24960;Dbxref=Genbank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9F04_RS24960;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	4655	6079	.	+	.	ID=gene-C9F04_RS24965;Name=C9F04_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24965;old_locus_tag=C9F04_25825
NZ_PYKF01000800.1	Protein Homology	CDS	4655	6079	.	+	0	ID=cds-WP_000729842.1;Parent=gene-C9F04_RS24965;Dbxref=Genbank:WP_000729842.1;Name=WP_000729842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=C9F04_RS24965;product=phage tail sheath family protein;protein_id=WP_000729842.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	6079	6603	.	+	.	ID=gene-C9F04_RS24970;Name=C9F04_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24970;old_locus_tag=C9F04_25830
NZ_PYKF01000800.1	Protein Homology	CDS	6079	6603	.	+	0	ID=cds-WP_086811333.1;Parent=gene-C9F04_RS24970;Dbxref=Genbank:WP_086811333.1;Name=WP_086811333.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9F04_RS24970;product=phage major tail tube protein;protein_id=WP_086811333.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	6655	6972	.	+	.	ID=gene-C9F04_RS24975;Name=C9F04_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24975;old_locus_tag=C9F04_25835
NZ_PYKF01000800.1	Protein Homology	CDS	6655	6972	.	+	0	ID=cds-WP_001003642.1;Parent=gene-C9F04_RS24975;Dbxref=Genbank:WP_001003642.1;Name=WP_001003642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9F04_RS24975;product=phage tail assembly protein;protein_id=WP_001003642.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	gene	6932	7060	.	+	.	ID=gene-C9F04_RS24980;Name=C9F04_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24980;old_locus_tag=C9F04_25840
NZ_PYKF01000800.1	Protein Homology	CDS	6932	7060	.	+	0	ID=cds-WP_146713330.1;Parent=gene-C9F04_RS24980;Dbxref=Genbank:WP_146713330.1;Name=WP_146713330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018260.2;locus_tag=C9F04_RS24980;product=GpE family phage tail protein;protein_id=WP_146713330.1;transl_table=11
NZ_PYKF01000800.1	RefSeq	pseudogene	7157	7865	.	+	.	ID=gene-C9F04_RS24985;Name=C9F04_RS24985;end_range=7865,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24985;old_locus_tag=C9F04_25845;partial=true;pseudo=true
NZ_PYKF01000800.1	Protein Homology	CDS	7157	7865	.	+	0	ID=cds-C9F04_RS24985;Parent=gene-C9F04_RS24985;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7865,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F04_RS24985;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000431.1 1 7858
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000431.1	RefSeq	region	1	7858	.	+	.	ID=NZ_PYKF01000431.1:1..7858;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000431.1	RefSeq	gene	22	1080	.	-	.	ID=gene-C9F04_RS12935;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9F04_RS12935;old_locus_tag=C9F04_13360
NZ_PYKF01000431.1	Protein Homology	CDS	22	1080	.	-	0	ID=cds-WP_146712724.1;Parent=gene-C9F04_RS12935;Dbxref=Genbank:WP_146712724.1;Name=WP_146712724.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9F04_RS12935;product=catabolic alanine racemase DadX;protein_id=WP_146712724.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	1094	2392	.	-	.	ID=gene-C9F04_RS12940;Name=C9F04_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12940;old_locus_tag=C9F04_13365
NZ_PYKF01000431.1	Protein Homology	CDS	1094	2392	.	-	0	ID=cds-WP_001266938.1;Parent=gene-C9F04_RS12940;Dbxref=Genbank:WP_001266938.1;Name=WP_001266938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9F04_RS12940;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	2715	4247	.	+	.	ID=gene-C9F04_RS12945;Name=C9F04_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12945;old_locus_tag=C9F04_13370
NZ_PYKF01000431.1	Protein Homology	CDS	2715	4247	.	+	0	ID=cds-WP_146712725.1;Parent=gene-C9F04_RS12945;Dbxref=Genbank:WP_146712725.1;Name=WP_146712725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9F04_RS12945;product=SpoVR family protein;protein_id=WP_146712725.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	4294	5013	.	-	.	ID=gene-C9F04_RS12950;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9F04_RS12950;old_locus_tag=C9F04_13375
NZ_PYKF01000431.1	Protein Homology	CDS	4294	5013	.	-	0	ID=cds-WP_000234826.1;Parent=gene-C9F04_RS12950;Dbxref=Genbank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9F04_RS12950;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	5233	6777	.	+	.	ID=gene-C9F04_RS12955;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9F04_RS12955;old_locus_tag=C9F04_13380
NZ_PYKF01000431.1	Protein Homology	CDS	5233	6777	.	+	0	ID=cds-WP_000406438.1;Parent=gene-C9F04_RS12955;Dbxref=Genbank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9F04_RS12955;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	6919	7449	.	+	.	ID=gene-C9F04_RS12960;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9F04_RS12960;old_locus_tag=C9F04_13385
NZ_PYKF01000431.1	Protein Homology	CDS	6919	7449	.	+	0	ID=cds-WP_000943475.1;Parent=gene-C9F04_RS12960;Dbxref=Genbank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016021;gbkey=CDS;gene=dsbB;go_component=integral component of membrane|0016021||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9F04_RS12960;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11
NZ_PYKF01000431.1	RefSeq	gene	7558	7858	.	+	.	ID=gene-C9F04_RS12965;Name=C9F04_RS12965;end_range=7858,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12965;old_locus_tag=C9F04_13390;partial=true
NZ_PYKF01000431.1	Protein Homology	CDS	7558	7858	.	+	0	ID=cds-WP_146712726.1;Parent=gene-C9F04_RS12965;Dbxref=Genbank:WP_146712726.1;Name=WP_146712726.1;end_range=7858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227626.1;locus_tag=C9F04_RS12965;partial=true;product=DUF1971 domain-containing protein;protein_id=WP_146712726.1;transl_table=11
##sequence-region NZ_PYKF01000459.1 1 7844
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000459.1	RefSeq	region	1	7844	.	+	.	ID=NZ_PYKF01000459.1:1..7844;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000459.1	RefSeq	gene	1	379	.	-	.	ID=gene-C9F04_RS13870;Name=C9F04_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13870;old_locus_tag=C9F04_14320;partial=true;start_range=.,1
NZ_PYKF01000459.1	Protein Homology	CDS	1	379	.	-	0	ID=cds-WP_146712776.1;Parent=gene-C9F04_RS13870;Dbxref=Genbank:WP_146712776.1;Name=WP_146712776.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9F04_RS13870;partial=true;product=PhzF family phenazine biosynthesis isomerase;protein_id=WP_146712776.1;start_range=.,1;transl_table=11
NZ_PYKF01000459.1	RefSeq	gene	485	1165	.	-	.	ID=gene-C9F04_RS13875;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F04_RS13875;old_locus_tag=C9F04_14325
NZ_PYKF01000459.1	Protein Homology	CDS	485	1165	.	-	0	ID=cds-WP_000617106.1;Parent=gene-C9F04_RS13875;Dbxref=Genbank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9F04_RS13875;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11
NZ_PYKF01000459.1	RefSeq	gene	1162	1857	.	-	.	ID=gene-C9F04_RS13880;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9F04_RS13880;old_locus_tag=C9F04_14330
NZ_PYKF01000459.1	Protein Homology	CDS	1162	1857	.	-	0	ID=cds-WP_001166287.1;Parent=gene-C9F04_RS13880;Dbxref=Genbank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9F04_RS13880;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11
NZ_PYKF01000459.1	RefSeq	gene	1857	3401	.	-	.	ID=gene-C9F04_RS13885;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F04_RS13885;old_locus_tag=C9F04_14335
NZ_PYKF01000459.1	Protein Homology	CDS	1857	3401	.	-	0	ID=cds-WP_135369603.1;Parent=gene-C9F04_RS13885;Dbxref=Genbank:WP_135369603.1;Name=WP_135369603.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9F04_RS13885;product=nitrate reductase subunit beta;protein_id=WP_135369603.1;transl_table=11
NZ_PYKF01000459.1	RefSeq	gene	3398	7138	.	-	.	ID=gene-C9F04_RS13890;Name=C9F04_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13890;old_locus_tag=C9F04_14340
NZ_PYKF01000459.1	Protein Homology	CDS	3398	7138	.	-	0	ID=cds-WP_146712777.1;Parent=gene-C9F04_RS13890;Dbxref=Genbank:WP_146712777.1;Name=WP_146712777.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9F04_RS13890;product=nitrate reductase subunit alpha;protein_id=WP_146712777.1;transl_table=11
NZ_PYKF01000459.1	RefSeq	pseudogene	7230	7844	.	-	.	ID=gene-C9F04_RS13895;Name=C9F04_RS13895;end_range=7844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13895;old_locus_tag=C9F04_14345;partial=true;pseudo=true
NZ_PYKF01000459.1	Protein Homology	CDS	7230	7844	.	-	0	ID=cds-C9F04_RS13895;Parent=gene-C9F04_RS13895;Note=involved in the transport of nitrate and nitrite%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9F04_RS13895;partial=true;product=nitrate/nitrite transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000503.1 1 7811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000503.1	RefSeq	region	1	7811	.	+	.	ID=NZ_PYKF01000503.1:1..7811;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000503.1	RefSeq	gene	109	960	.	-	.	ID=gene-C9F04_RS15060;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9F04_RS15060;old_locus_tag=C9F04_15540
NZ_PYKF01000503.1	Protein Homology	CDS	109	960	.	-	0	ID=cds-WP_000201805.1;Parent=gene-C9F04_RS15060;Dbxref=Genbank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9F04_RS15060;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11
NZ_PYKF01000503.1	RefSeq	gene	905	2749	.	-	.	ID=gene-C9F04_RS15065;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9F04_RS15065;old_locus_tag=C9F04_15545
NZ_PYKF01000503.1	Protein Homology	CDS	905	2749	.	-	0	ID=cds-WP_135369093.1;Parent=gene-C9F04_RS15065;Dbxref=Genbank:WP_135369093.1;Name=WP_135369093.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9F04_RS15065;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_135369093.1;transl_table=11
NZ_PYKF01000503.1	cmsearch	riboswitch	2815	3008	.	-	.	ID=id-NZ_PYKF01000503.1:2815..3008;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000503.1	RefSeq	gene	3123	4223	.	+	.	ID=gene-C9F04_RS15070;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9F04_RS15070;old_locus_tag=C9F04_15550
NZ_PYKF01000503.1	Protein Homology	CDS	3123	4223	.	+	0	ID=cds-WP_000186981.1;Parent=gene-C9F04_RS15070;Dbxref=Genbank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9F04_RS15070;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11
NZ_PYKF01000503.1	RefSeq	gene	4270	4629	.	-	.	ID=gene-C9F04_RS15075;Name=C9F04_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15075;old_locus_tag=C9F04_15555
NZ_PYKF01000503.1	Protein Homology	CDS	4270	4629	.	-	0	ID=cds-WP_000813838.1;Parent=gene-C9F04_RS15075;Dbxref=Genbank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9F04_RS15075;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11
NZ_PYKF01000503.1	RefSeq	gene	4645	5280	.	-	.	ID=gene-C9F04_RS15080;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9F04_RS15080;old_locus_tag=C9F04_15560
NZ_PYKF01000503.1	Protein Homology	CDS	4645	5280	.	-	0	ID=cds-WP_000971958.1;Parent=gene-C9F04_RS15080;Dbxref=Genbank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9F04_RS15080;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11
NZ_PYKF01000503.1	RefSeq	gene	5479	6879	.	+	.	ID=gene-C9F04_RS15085;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9F04_RS15085;old_locus_tag=C9F04_15570
NZ_PYKF01000503.1	Protein Homology	CDS	5479	6879	.	+	0	ID=cds-WP_001120791.1;Parent=gene-C9F04_RS15085;Dbxref=Genbank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9F04_RS15085;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11
NZ_PYKF01000503.1	RefSeq	gene	6862	7779	.	-	.	ID=gene-C9F04_RS15090;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9F04_RS15090;old_locus_tag=C9F04_15575
NZ_PYKF01000503.1	Protein Homology	CDS	6862	7779	.	-	0	ID=cds-WP_001025919.1;Parent=gene-C9F04_RS15090;Dbxref=Genbank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9F04_RS15090;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11
##sequence-region NZ_PYKF01000002.1 1 7787
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000002.1	RefSeq	region	1	7787	.	+	.	ID=NZ_PYKF01000002.1:1..7787;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000002.1	RefSeq	gene	1	1101	.	+	.	ID=gene-C9F04_RS00010;Name=C9F04_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00010;old_locus_tag=C9F04_00015;partial=true;start_range=.,1
NZ_PYKF01000002.1	Protein Homology	CDS	1	1101	.	+	0	ID=cds-WP_261770719.1;Parent=gene-C9F04_RS00010;Dbxref=Genbank:WP_261770719.1;Name=WP_261770719.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F04_RS00010;partial=true;product=MFS transporter;protein_id=WP_261770719.1;start_range=.,1;transl_table=11
NZ_PYKF01000002.1	RefSeq	gene	1138	1962	.	-	.	ID=gene-C9F04_RS00015;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9F04_RS00015;old_locus_tag=C9F04_00020
NZ_PYKF01000002.1	Protein Homology	CDS	1138	1962	.	-	0	ID=cds-WP_001186673.1;Parent=gene-C9F04_RS00015;Dbxref=Genbank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9F04_RS00015;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11
NZ_PYKF01000002.1	RefSeq	gene	1992	4664	.	-	.	ID=gene-C9F04_RS00020;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9F04_RS00020;old_locus_tag=C9F04_00025
NZ_PYKF01000002.1	Protein Homology	CDS	1992	4664	.	-	0	ID=cds-WP_146712122.1;Parent=gene-C9F04_RS00020;Dbxref=Genbank:WP_146712122.1;Name=WP_146712122.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9F04_RS00020;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_146712122.1;transl_table=11
NZ_PYKF01000002.1	RefSeq	gene	4902	5696	.	-	.	ID=gene-C9F04_RS00025;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9F04_RS00025;old_locus_tag=C9F04_00035
NZ_PYKF01000002.1	Protein Homology	CDS	4902	5696	.	-	0	ID=cds-WP_001018214.1;Parent=gene-C9F04_RS00025;Dbxref=Genbank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9F04_RS00025;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11
NZ_PYKF01000002.1	RefSeq	gene	6147	6872	.	+	.	ID=gene-C9F04_RS00030;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9F04_RS00030;old_locus_tag=C9F04_00040
NZ_PYKF01000002.1	Protein Homology	CDS	6147	6872	.	+	0	ID=cds-WP_146712123.1;Parent=gene-C9F04_RS00030;Dbxref=Genbank:WP_146712123.1;Name=WP_146712123.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9F04_RS00030;product=30S ribosomal protein S2;protein_id=WP_146712123.1;transl_table=11
NZ_PYKF01000002.1	RefSeq	gene	7130	7786	.	+	.	ID=gene-C9F04_RS00035;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9F04_RS00035;old_locus_tag=C9F04_00050
NZ_PYKF01000002.1	Protein Homology	CDS	7130	7786	.	+	0	ID=cds-WP_261770720.1;Parent=gene-C9F04_RS00035;Dbxref=Genbank:WP_261770720.1;Name=WP_261770720.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9F04_RS00035;product=translation elongation factor Ts;protein_id=WP_261770720.1;transl_table=11
##sequence-region NZ_PYKF01000616.1 1 20926
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000616.1	RefSeq	region	1	20926	.	+	.	ID=NZ_PYKF01000616.1:1..20926;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000616.1	RefSeq	pseudogene	1	237	.	+	.	ID=gene-C9F04_RS18600;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;gene_synonym=yahU;locus_tag=C9F04_RS18600;old_locus_tag=C9F04_19210;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000616.1	Protein Homology	CDS	1	237	.	+	0	ID=cds-C9F04_RS18600;Parent=gene-C9F04_RS18600;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F04_RS18600;partial=true;product=propionyl-CoA synthetase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	341	1315	.	-	.	ID=gene-C9F04_RS18605;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9F04_RS18605;old_locus_tag=C9F04_19215
NZ_PYKF01000616.1	Protein Homology	CDS	341	1315	.	-	0	ID=cds-WP_000130724.1;Parent=gene-C9F04_RS18605;Dbxref=Genbank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9F04_RS18605;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	1828	4767	.	+	.	ID=gene-C9F04_RS18610;Name=C9F04_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18610;old_locus_tag=C9F04_19220
NZ_PYKF01000616.1	Protein Homology	CDS	1828	4767	.	+	0	ID=cds-WP_135369269.1;Parent=gene-C9F04_RS18610;Dbxref=Genbank:WP_135369269.1;Name=WP_135369269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F04_RS18610;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135369269.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	4853	5476	.	+	.	ID=gene-C9F04_RS18615;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9F04_RS18615;old_locus_tag=C9F04_19225
NZ_PYKF01000616.1	Protein Homology	CDS	4853	5476	.	+	0	ID=cds-WP_000950242.1;Parent=gene-C9F04_RS18615;Dbxref=Genbank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9F04_RS18615;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	5521	6678	.	-	.	ID=gene-C9F04_RS18620;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9F04_RS18620;old_locus_tag=C9F04_19230
NZ_PYKF01000616.1	Protein Homology	CDS	5521	6678	.	-	0	ID=cds-WP_000830785.1;Parent=gene-C9F04_RS18620;Dbxref=Genbank:WP_000830785.1;Name=WP_000830785.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9F04_RS18620;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830785.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	7025	8245	.	+	.	ID=gene-C9F04_RS18625;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9F04_RS18625;old_locus_tag=C9F04_19240
NZ_PYKF01000616.1	Protein Homology	CDS	7025	8245	.	+	0	ID=cds-WP_000477023.1;Parent=gene-C9F04_RS18625;Dbxref=Genbank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9F04_RS18625;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	8260	9354	.	+	.	ID=gene-C9F04_RS18630;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9F04_RS18630;old_locus_tag=C9F04_19245
NZ_PYKF01000616.1	Protein Homology	CDS	8260	9354	.	+	0	ID=cds-WP_001271421.1;Parent=gene-C9F04_RS18630;Dbxref=Genbank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9F04_RS18630;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	9392	9700	.	-	.	ID=gene-C9F04_RS18635;Name=C9F04_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18635;old_locus_tag=C9F04_19250
NZ_PYKF01000616.1	Protein Homology	CDS	9392	9700	.	-	0	ID=cds-WP_000763139.1;Parent=gene-C9F04_RS18635;Dbxref=Genbank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9F04_RS18635;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	9968	10183	.	+	.	ID=gene-C9F04_RS18640;Name=C9F04_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18640;old_locus_tag=C9F04_19255
NZ_PYKF01000616.1	Protein Homology	CDS	9968	10183	.	+	0	ID=cds-WP_001239240.1;Parent=gene-C9F04_RS18640;Dbxref=Genbank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9F04_RS18640;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	10209	11303	.	-	.	ID=gene-C9F04_RS18645;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9F04_RS18645;old_locus_tag=C9F04_19260
NZ_PYKF01000616.1	Protein Homology	CDS	10209	11303	.	-	0	ID=cds-WP_001096593.1;Parent=gene-C9F04_RS18645;Dbxref=Genbank:WP_001096593.1;Name=WP_001096593.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9F04_RS18645;product=D-alanine--D-alanine ligase;protein_id=WP_001096593.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	11381	12094	.	+	.	ID=gene-C9F04_RS18650;Name=C9F04_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18650;old_locus_tag=C9F04_19265
NZ_PYKF01000616.1	Protein Homology	CDS	11381	12094	.	+	0	ID=cds-WP_000480794.1;Parent=gene-C9F04_RS18650;Dbxref=Genbank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9F04_RS18650;product=extensin family protein;protein_id=WP_000480794.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	12263	13474	.	+	.	ID=gene-C9F04_RS18655;Name=C9F04_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18655;old_locus_tag=C9F04_19270
NZ_PYKF01000616.1	Protein Homology	CDS	12263	13474	.	+	0	ID=cds-WP_000446768.1;Parent=gene-C9F04_RS18655;Dbxref=Genbank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9F04_RS18655;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	13771	14031	.	+	.	ID=gene-C9F04_RS18660;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9F04_RS18660;old_locus_tag=C9F04_19275
NZ_PYKF01000616.1	Protein Homology	CDS	13771	14031	.	+	0	ID=cds-WP_001518423.1;Parent=gene-C9F04_RS18660;Dbxref=Genbank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9F04_RS18660;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	14380	14700	.	+	.	ID=gene-C9F04_RS18665;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9F04_RS18665;old_locus_tag=C9F04_19280
NZ_PYKF01000616.1	Protein Homology	CDS	14380	14700	.	+	0	ID=cds-WP_000705165.1;Parent=gene-C9F04_RS18665;Dbxref=Genbank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9F04_RS18665;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	14792	15904	.	+	.	ID=gene-C9F04_RS18670;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9F04_RS18670;old_locus_tag=C9F04_19285
NZ_PYKF01000616.1	Protein Homology	CDS	14792	15904	.	+	0	ID=cds-WP_080085919.1;Parent=gene-C9F04_RS18670;Dbxref=Genbank:WP_080085919.1;Name=WP_080085919.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9F04_RS18670;product=diguanylate cyclase AdrA;protein_id=WP_080085919.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	15919	16728	.	-	.	ID=gene-C9F04_RS18675;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9F04_RS18675;old_locus_tag=C9F04_19290
NZ_PYKF01000616.1	Protein Homology	CDS	15919	16728	.	-	0	ID=cds-WP_000412193.1;Parent=gene-C9F04_RS18675;Dbxref=Genbank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9F04_RS18675;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	16868	17323	.	+	.	ID=gene-C9F04_RS18680;Name=C9F04_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18680;old_locus_tag=C9F04_19295
NZ_PYKF01000616.1	Protein Homology	CDS	16868	17323	.	+	0	ID=cds-WP_000158137.1;Parent=gene-C9F04_RS18680;Dbxref=Genbank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9F04_RS18680;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	17508	18053	.	+	.	ID=gene-C9F04_RS18685;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9F04_RS18685;old_locus_tag=C9F04_19300
NZ_PYKF01000616.1	Protein Homology	CDS	17508	18053	.	+	0	ID=cds-WP_146713002.1;Parent=gene-C9F04_RS18685;Dbxref=Genbank:WP_146713002.1;Name=WP_146713002.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9F04_RS18685;product=shikimate kinase AroL;protein_id=WP_146713002.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	18080	18271	.	+	.	ID=gene-C9F04_RS18690;Name=C9F04_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18690;old_locus_tag=C9F04_19305
NZ_PYKF01000616.1	Protein Homology	CDS	18080	18271	.	+	0	ID=cds-WP_001143161.1;Parent=gene-C9F04_RS18690;Dbxref=Genbank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9F04_RS18690;product=YaiA family protein;protein_id=WP_001143161.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	18522	19199	.	+	.	ID=gene-C9F04_RS18695;Name=C9F04_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18695;old_locus_tag=C9F04_19310
NZ_PYKF01000616.1	Protein Homology	CDS	18522	19199	.	+	0	ID=cds-WP_001276437.1;Parent=gene-C9F04_RS18695;Dbxref=Genbank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9F04_RS18695;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	19270	19554	.	+	.	ID=gene-C9F04_RS18700;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9F04_RS18700;old_locus_tag=C9F04_19315
NZ_PYKF01000616.1	Protein Homology	CDS	19270	19554	.	+	0	ID=cds-WP_146713003.1;Parent=gene-C9F04_RS18700;Dbxref=Genbank:WP_146713003.1;Name=WP_146713003.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9F04_RS18700;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_146713003.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	19592	20503	.	-	.	ID=gene-C9F04_RS18705;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9F04_RS18705;old_locus_tag=C9F04_19320
NZ_PYKF01000616.1	Protein Homology	CDS	19592	20503	.	-	0	ID=cds-WP_000964305.1;Parent=gene-C9F04_RS18705;Dbxref=Genbank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9F04_RS18705;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11
NZ_PYKF01000616.1	RefSeq	gene	20629	20926	.	+	.	ID=gene-C9F04_RS18710;Name=C9F04_RS18710;end_range=20926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18710;old_locus_tag=C9F04_19325;partial=true
NZ_PYKF01000616.1	Protein Homology	CDS	20629	20926	.	+	0	ID=cds-WP_146713004.1;Parent=gene-C9F04_RS18710;Dbxref=Genbank:WP_146713004.1;Name=WP_146713004.1;end_range=20926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9F04_RS18710;partial=true;product=ROK family protein;protein_id=WP_146713004.1;transl_table=11
##sequence-region NZ_PYKF01000452.1 1 7763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000452.1	RefSeq	region	1	7763	.	+	.	ID=NZ_PYKF01000452.1:1..7763;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000452.1	RefSeq	gene	1	829	.	-	.	ID=gene-C9F04_RS13600;Name=C9F04_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13600;old_locus_tag=C9F04_14045;partial=true;start_range=.,1
NZ_PYKF01000452.1	Protein Homology	CDS	1	829	.	-	0	ID=cds-WP_146712760.1;Parent=gene-C9F04_RS13600;Dbxref=Genbank:WP_146712760.1;Name=WP_146712760.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499598.1;locus_tag=C9F04_RS13600;partial=true;product=MFS transporter;protein_id=WP_146712760.1;start_range=.,1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	917	1849	.	+	.	ID=gene-C9F04_RS13605;Name=C9F04_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13605;old_locus_tag=C9F04_14050
NZ_PYKF01000452.1	Protein Homology	CDS	917	1849	.	+	0	ID=cds-WP_135369064.1;Parent=gene-C9F04_RS13605;Dbxref=Genbank:WP_135369064.1;Name=WP_135369064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9F04_RS13605;product=LysR family transcriptional regulator;protein_id=WP_135369064.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	1891	3387	.	-	.	ID=gene-C9F04_RS13610;Name=C9F04_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13610;old_locus_tag=C9F04_14055
NZ_PYKF01000452.1	Protein Homology	CDS	1891	3387	.	-	0	ID=cds-WP_146712761.1;Parent=gene-C9F04_RS13610;Dbxref=Genbank:WP_146712761.1;Name=WP_146712761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9F04_RS13610;product=gluconate:H+ symporter;protein_id=WP_146712761.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	3384	4334	.	-	.	ID=gene-C9F04_RS13615;Name=C9F04_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13615;old_locus_tag=C9F04_14060
NZ_PYKF01000452.1	Protein Homology	CDS	3384	4334	.	-	0	ID=cds-WP_146712762.1;Parent=gene-C9F04_RS13615;Dbxref=Genbank:WP_146712762.1;Name=WP_146712762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9F04_RS13615;product=SDR family oxidoreductase;protein_id=WP_146712762.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	4374	5150	.	-	.	ID=gene-C9F04_RS13620;Name=C9F04_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13620;old_locus_tag=C9F04_14065
NZ_PYKF01000452.1	Protein Homology	CDS	4374	5150	.	-	0	ID=cds-WP_146712763.1;Parent=gene-C9F04_RS13620;Dbxref=Genbank:WP_146712763.1;Name=WP_146712763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9F04_RS13620;product=HPr family phosphocarrier protein;protein_id=WP_146712763.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	5155	5793	.	-	.	ID=gene-C9F04_RS13625;Name=C9F04_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13625;old_locus_tag=C9F04_14070
NZ_PYKF01000452.1	Protein Homology	CDS	5155	5793	.	-	0	ID=cds-WP_146712764.1;Parent=gene-C9F04_RS13625;Dbxref=Genbank:WP_146712764.1;Name=WP_146712764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9F04_RS13625;product=aldolase;protein_id=WP_146712764.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	5790	7052	.	-	.	ID=gene-C9F04_RS13630;Name=C9F04_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13630;old_locus_tag=C9F04_14075
NZ_PYKF01000452.1	Protein Homology	CDS	5790	7052	.	-	0	ID=cds-WP_000912492.1;Parent=gene-C9F04_RS13630;Dbxref=Genbank:WP_000912492.1;Name=WP_000912492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9F04_RS13630;product=3-oxo-tetronate kinase;protein_id=WP_000912492.1;transl_table=11
NZ_PYKF01000452.1	RefSeq	gene	7046	7763	.	-	.	ID=gene-C9F04_RS13635;Name=C9F04_RS13635;end_range=7763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13635;old_locus_tag=C9F04_14080;partial=true
NZ_PYKF01000452.1	Protein Homology	CDS	7046	7763	.	-	1	ID=cds-WP_146712765.1;Parent=gene-C9F04_RS13635;Dbxref=Genbank:WP_146712765.1;Name=WP_146712765.1;end_range=7763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9F04_RS13635;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_146712765.1;transl_table=11
##sequence-region NZ_PYKF01000575.1 1 7741
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000575.1	RefSeq	region	1	7741	.	+	.	ID=NZ_PYKF01000575.1:1..7741;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000575.1	RefSeq	gene	1	1395	.	-	.	ID=gene-C9F04_RS17180;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9F04_RS17180;old_locus_tag=C9F04_17730;partial=true;start_range=.,1
NZ_PYKF01000575.1	Protein Homology	CDS	1	1395	.	-	0	ID=cds-WP_146712930.1;Parent=gene-C9F04_RS17180;Dbxref=Genbank:WP_146712930.1;Name=WP_146712930.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=C9F04_RS17180;partial=true;product=autotransporter assembly complex protein TamA;protein_id=WP_146712930.1;start_range=.,1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	1608	2246	.	+	.	ID=gene-C9F04_RS17185;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9F04_RS17185;old_locus_tag=C9F04_17735
NZ_PYKF01000575.1	Protein Homology	CDS	1608	2246	.	+	0	ID=cds-WP_000051467.1;Parent=gene-C9F04_RS17185;Dbxref=Genbank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9F04_RS17185;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	2429	3772	.	+	.	ID=gene-C9F04_RS17190;Name=C9F04_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17190;old_locus_tag=C9F04_17740
NZ_PYKF01000575.1	Protein Homology	CDS	2429	3772	.	+	0	ID=cds-WP_146712931.1;Parent=gene-C9F04_RS17190;Dbxref=Genbank:WP_146712931.1;Name=WP_146712931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9F04_RS17190;product=hemolysin family protein;protein_id=WP_146712931.1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	3857	4063	.	-	.	ID=gene-C9F04_RS17195;Name=C9F04_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17195;old_locus_tag=C9F04_17745
NZ_PYKF01000575.1	Protein Homology	CDS	3857	4063	.	-	0	ID=cds-WP_000689229.1;Parent=gene-C9F04_RS17195;Dbxref=Genbank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9F04_RS17195;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	4390	4947	.	+	.	ID=gene-C9F04_RS17200;Name=C9F04_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17200;old_locus_tag=C9F04_17755
NZ_PYKF01000575.1	Protein Homology	CDS	4390	4947	.	+	0	ID=cds-WP_000175301.1;Parent=gene-C9F04_RS17200;Dbxref=Genbank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9F04_RS17200;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	4937	5677	.	-	.	ID=gene-C9F04_RS17205;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9F04_RS17205;old_locus_tag=C9F04_17760
NZ_PYKF01000575.1	Protein Homology	CDS	4937	5677	.	-	0	ID=cds-WP_000893398.1;Parent=gene-C9F04_RS17205;Dbxref=Genbank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9F04_RS17205;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11
NZ_PYKF01000575.1	RefSeq	gene	5945	7741	.	+	.	ID=gene-C9F04_RS17210;Name=C9F04_RS17210;end_range=7741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17210;old_locus_tag=C9F04_17770;partial=true
NZ_PYKF01000575.1	Protein Homology	CDS	5945	7741	.	+	0	ID=cds-WP_146712932.1;Parent=gene-C9F04_RS17210;Dbxref=Genbank:WP_146712932.1;Name=WP_146712932.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;end_range=7741,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9F04_RS17210;partial=true;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_146712932.1;transl_table=11
##sequence-region NZ_PYKF01000529.1 1 7726
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000529.1	RefSeq	region	1	7726	.	+	.	ID=NZ_PYKF01000529.1:1..7726;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000529.1	RefSeq	pseudogene	1	176	.	+	.	ID=gene-C9F04_RS15845;Name=C9F04_RS15845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15845;old_locus_tag=C9F04_16335;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000529.1	Protein Homology	CDS	1	176	.	+	2	ID=cds-C9F04_RS15845;Parent=gene-C9F04_RS15845;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9F04_RS15845;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	176	901	.	+	.	ID=gene-C9F04_RS15850;Name=C9F04_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15850;old_locus_tag=C9F04_16340
NZ_PYKF01000529.1	Protein Homology	CDS	176	901	.	+	0	ID=cds-WP_000953643.1;Parent=gene-C9F04_RS15850;Dbxref=Genbank:WP_000953643.1;Name=WP_000953643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9F04_RS15850;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953643.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	898	1689	.	+	.	ID=gene-C9F04_RS15855;Name=C9F04_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15855;old_locus_tag=C9F04_16345
NZ_PYKF01000529.1	Protein Homology	CDS	898	1689	.	+	0	ID=cds-WP_146712859.1;Parent=gene-C9F04_RS15855;Dbxref=Genbank:WP_146712859.1;Name=WP_146712859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9F04_RS15855;product=cobalt-precorrin-6A reductase;protein_id=WP_146712859.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	1692	2486	.	+	.	ID=gene-C9F04_RS15860;Name=C9F04_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15860;old_locus_tag=C9F04_16350
NZ_PYKF01000529.1	Protein Homology	CDS	1692	2486	.	+	0	ID=cds-WP_000709784.1;Parent=gene-C9F04_RS15860;Dbxref=Genbank:WP_000709784.1;Name=WP_000709784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9F04_RS15860;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	2483	3196	.	+	.	ID=gene-C9F04_RS15865;Name=C9F04_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15865;old_locus_tag=C9F04_16355
NZ_PYKF01000529.1	Protein Homology	CDS	2483	3196	.	+	0	ID=cds-WP_135369614.1;Parent=gene-C9F04_RS15865;Dbxref=Genbank:WP_135369614.1;Name=WP_135369614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9F04_RS15865;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_135369614.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	3193	3930	.	+	.	ID=gene-C9F04_RS15870;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9F04_RS15870;old_locus_tag=C9F04_16360
NZ_PYKF01000529.1	Protein Homology	CDS	3193	3930	.	+	0	ID=cds-WP_146712860.1;Parent=gene-C9F04_RS15870;Dbxref=Genbank:WP_146712860.1;Name=WP_146712860.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F04_RS15870;product=cobalt ECF transporter S component CbiM;protein_id=WP_146712860.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	3932	4213	.	+	.	ID=gene-C9F04_RS15875;Name=C9F04_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15875;old_locus_tag=C9F04_16365
NZ_PYKF01000529.1	Protein Homology	CDS	3932	4213	.	+	0	ID=cds-WP_000753216.1;Parent=gene-C9F04_RS15875;Dbxref=Genbank:WP_000753216.1;Name=WP_000753216.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9F04_RS15875;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753216.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	4200	4877	.	+	.	ID=gene-C9F04_RS15880;Name=C9F04_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15880;old_locus_tag=C9F04_16370
NZ_PYKF01000529.1	Protein Homology	CDS	4200	4877	.	+	0	ID=cds-WP_080088129.1;Parent=gene-C9F04_RS15880;Dbxref=Genbank:WP_080088129.1;Name=WP_080088129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9F04_RS15880;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_080088129.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	4886	5701	.	+	.	ID=gene-C9F04_RS15885;Name=C9F04_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15885;old_locus_tag=C9F04_16375
NZ_PYKF01000529.1	Protein Homology	CDS	4886	5701	.	+	0	ID=cds-WP_000881540.1;Parent=gene-C9F04_RS15885;Dbxref=Genbank:WP_000881540.1;Name=WP_000881540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9F04_RS15885;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881540.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	5698	7218	.	+	.	ID=gene-C9F04_RS15890;Name=C9F04_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15890;old_locus_tag=C9F04_16380
NZ_PYKF01000529.1	Protein Homology	CDS	5698	7218	.	+	0	ID=cds-WP_135369613.1;Parent=gene-C9F04_RS15890;Dbxref=Genbank:WP_135369613.1;Name=WP_135369613.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9F04_RS15890;product=cobyric acid synthase;protein_id=WP_135369613.1;transl_table=11
NZ_PYKF01000529.1	RefSeq	gene	7215	7726	.	+	.	ID=gene-C9F04_RS15895;Name=cobU;end_range=7726,.;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9F04_RS15895;old_locus_tag=C9F04_16385;partial=true
NZ_PYKF01000529.1	Protein Homology	CDS	7215	7726	.	+	0	ID=cds-WP_146712861.1;Parent=gene-C9F04_RS15895;Dbxref=Genbank:WP_146712861.1;Name=WP_146712861.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;end_range=7726,.;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123030.1;locus_tag=C9F04_RS15895;partial=true;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_146712861.1;transl_table=11
##sequence-region NZ_PYKF01000572.1 1 7663
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000572.1	RefSeq	region	1	7663	.	+	.	ID=NZ_PYKF01000572.1:1..7663;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000572.1	RefSeq	gene	1	290	.	+	.	ID=gene-C9F04_RS17035;Name=C9F04_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17035;old_locus_tag=C9F04_17585;partial=true;start_range=.,1
NZ_PYKF01000572.1	Protein Homology	CDS	1	290	.	+	2	ID=cds-WP_146712923.1;Parent=gene-C9F04_RS17035;Dbxref=Genbank:WP_146712923.1;Name=WP_146712923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F04_RS17035;partial=true;product=DUF1732 domain-containing protein;protein_id=WP_146712923.1;start_range=.,1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	340	1242	.	-	.	ID=gene-C9F04_RS17040;Name=C9F04_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17040;old_locus_tag=C9F04_17590
NZ_PYKF01000572.1	Protein Homology	CDS	340	1242	.	-	0	ID=cds-WP_001748906.1;Parent=gene-C9F04_RS17040;Dbxref=Genbank:WP_001748906.1;Name=WP_001748906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9F04_RS17040;product=LysR family transcriptional regulator;protein_id=WP_001748906.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	1316	2197	.	+	.	ID=gene-C9F04_RS17045;Name=C9F04_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17045;old_locus_tag=C9F04_17595
NZ_PYKF01000572.1	Protein Homology	CDS	1316	2197	.	+	0	ID=cds-WP_135369634.1;Parent=gene-C9F04_RS17045;Dbxref=Genbank:WP_135369634.1;Name=WP_135369634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9F04_RS17045;product=HARLDQ motif MBL-fold protein;protein_id=WP_135369634.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	2448	3065	.	+	.	ID=gene-C9F04_RS17050;Name=C9F04_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17050;old_locus_tag=C9F04_17600
NZ_PYKF01000572.1	Protein Homology	CDS	2448	3065	.	+	0	ID=cds-WP_000924334.1;Parent=gene-C9F04_RS17050;Dbxref=Genbank:WP_000924334.1;Name=WP_000924334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9F04_RS17050;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	3062	4747	.	-	.	ID=gene-C9F04_RS17055;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9F04_RS17055;old_locus_tag=C9F04_17605
NZ_PYKF01000572.1	Protein Homology	CDS	3062	4747	.	-	0	ID=cds-WP_135369667.1;Parent=gene-C9F04_RS17055;Dbxref=Genbank:WP_135369667.1;Name=WP_135369667.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F04_RS17055;product=NAD-dependent DNA ligase LigB;protein_id=WP_135369667.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	5004	5627	.	+	.	ID=gene-C9F04_RS17060;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9F04_RS17060;old_locus_tag=C9F04_17610
NZ_PYKF01000572.1	Protein Homology	CDS	5004	5627	.	+	0	ID=cds-WP_000046966.1;Parent=gene-C9F04_RS17060;Dbxref=Genbank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9F04_RS17060;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	5682	5957	.	+	.	ID=gene-C9F04_RS17065;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9F04_RS17065;old_locus_tag=C9F04_17615
NZ_PYKF01000572.1	Protein Homology	CDS	5682	5957	.	+	0	ID=cds-WP_000135058.1;Parent=gene-C9F04_RS17065;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9F04_RS17065;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_PYKF01000572.1	RefSeq	gene	5976	7663	.	+	.	ID=gene-C9F04_RS17070;Name=spoT;end_range=7663,.;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9F04_RS17070;old_locus_tag=C9F04_17620;partial=true
NZ_PYKF01000572.1	Protein Homology	CDS	5976	7663	.	+	0	ID=cds-WP_146712924.1;Parent=gene-C9F04_RS17070;Dbxref=Genbank:WP_146712924.1;Name=WP_146712924.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;end_range=7663,.;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280476.1;locus_tag=C9F04_RS17070;partial=true;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_146712924.1;transl_table=11
##sequence-region NZ_PYKF01000677.1 1 7597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000677.1	RefSeq	region	1	7597	.	+	.	ID=NZ_PYKF01000677.1:1..7597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000677.1	RefSeq	gene	1	772	.	-	.	ID=gene-C9F04_RS20800;Name=C9F04_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20800;old_locus_tag=C9F04_21470;partial=true;start_range=.,1
NZ_PYKF01000677.1	Protein Homology	CDS	1	772	.	-	0	ID=cds-WP_146713108.1;Parent=gene-C9F04_RS20800;Dbxref=Genbank:WP_146713108.1;Name=WP_146713108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9F04_RS20800;partial=true;product=glutathionylspermidine synthase family protein;protein_id=WP_146713108.1;start_range=.,1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	775	1413	.	-	.	ID=gene-C9F04_RS20805;Name=C9F04_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20805;old_locus_tag=C9F04_21475
NZ_PYKF01000677.1	Protein Homology	CDS	775	1413	.	-	0	ID=cds-WP_001085596.1;Parent=gene-C9F04_RS20805;Dbxref=Genbank:WP_001085596.1;Name=WP_001085596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9F04_RS20805;product=DUF1190 domain-containing protein;protein_id=WP_001085596.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	1423	1821	.	-	.	ID=gene-C9F04_RS20810;Name=C9F04_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20810;old_locus_tag=C9F04_21480
NZ_PYKF01000677.1	Protein Homology	CDS	1423	1821	.	-	0	ID=cds-WP_000547737.1;Parent=gene-C9F04_RS20810;Dbxref=Genbank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9F04_RS20810;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	1839	2522	.	-	.	ID=gene-C9F04_RS20815;Name=C9F04_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20815;old_locus_tag=C9F04_21485
NZ_PYKF01000677.1	Protein Homology	CDS	1839	2522	.	-	0	ID=cds-WP_000090290.1;Parent=gene-C9F04_RS20815;Dbxref=Genbank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9F04_RS20815;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	2495	3565	.	-	.	ID=gene-C9F04_RS20820;Name=C9F04_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20820;old_locus_tag=C9F04_21490
NZ_PYKF01000677.1	Protein Homology	CDS	2495	3565	.	-	0	ID=cds-WP_000899674.1;Parent=gene-C9F04_RS20820;Dbxref=Genbank:WP_000899674.1;Name=WP_000899674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9F04_RS20820;product=ion channel;protein_id=WP_000899674.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	3565	4263	.	-	.	ID=gene-C9F04_RS20825;Name=C9F04_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20825;old_locus_tag=C9F04_21495
NZ_PYKF01000677.1	Protein Homology	CDS	3565	4263	.	-	0	ID=cds-WP_135369327.1;Parent=gene-C9F04_RS20825;Dbxref=Genbank:WP_135369327.1;Name=WP_135369327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9F04_RS20825;product=PspA/IM30 family protein;protein_id=WP_135369327.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	4278	4682	.	-	.	ID=gene-C9F04_RS20830;Name=C9F04_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20830;old_locus_tag=C9F04_21500
NZ_PYKF01000677.1	Protein Homology	CDS	4278	4682	.	-	0	ID=cds-WP_001621793.1;Parent=gene-C9F04_RS20830;Dbxref=Genbank:WP_001621793.1;Name=WP_001621793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9F04_RS20830;product=DUF2170 family protein;protein_id=WP_001621793.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	4815	5546	.	-	.	ID=gene-C9F04_RS20835;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9F04_RS20835;old_locus_tag=C9F04_21505
NZ_PYKF01000677.1	Protein Homology	CDS	4815	5546	.	-	0	ID=cds-WP_001293277.1;Parent=gene-C9F04_RS20835;Dbxref=Genbank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9F04_RS20835;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11
NZ_PYKF01000677.1	RefSeq	gene	5637	7597	.	-	.	ID=gene-C9F04_RS20840;Name=rnr;end_range=7597,.;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9F04_RS20840;old_locus_tag=C9F04_21510;partial=true
NZ_PYKF01000677.1	Protein Homology	CDS	5637	7597	.	-	2	ID=cds-WP_146713109.1;Parent=gene-C9F04_RS20840;Dbxref=Genbank:WP_146713109.1;Name=WP_146713109.1;Ontology_term=GO:0016070,GO:0004540;end_range=7597,.;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9F04_RS20840;partial=true;product=ribonuclease R;protein_id=WP_146713109.1;transl_table=11
##sequence-region NZ_PYKF01000661.1 1 7570
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000661.1	RefSeq	region	1	7570	.	+	.	ID=NZ_PYKF01000661.1:1..7570;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000661.1	RefSeq	gene	1	1246	.	+	.	ID=gene-C9F04_RS20250;Name=C9F04_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20250;old_locus_tag=C9F04_20910;partial=true;start_range=.,1
NZ_PYKF01000661.1	Protein Homology	CDS	1	342	.	+	2	ID=cds-WP_146713078.1;Parent=gene-C9F04_RS20250;Dbxref=Genbank:WP_146713078.1;Name=WP_146713078.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F04_RS20250;partial=true;product=IS3 family transposase;protein_id=WP_146713078.1;start_range=.,1;transl_table=11
NZ_PYKF01000661.1	Protein Homology	CDS	342	1246	.	+	2	ID=cds-WP_146713078.1;Parent=gene-C9F04_RS20250;Dbxref=Genbank:WP_146713078.1;Name=WP_146713078.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F04_RS20250;partial=true;product=IS3 family transposase;protein_id=WP_146713078.1;transl_table=11
NZ_PYKF01000661.1	RefSeq	gene	1296	1955	.	-	.	ID=gene-C9F04_RS20255;Name=C9F04_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20255;old_locus_tag=C9F04_20915
NZ_PYKF01000661.1	Protein Homology	CDS	1296	1955	.	-	0	ID=cds-WP_000009241.1;Parent=gene-C9F04_RS20255;Dbxref=Genbank:WP_000009241.1;Name=WP_000009241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=C9F04_RS20255;product=DUF2726 domain-containing protein;protein_id=WP_000009241.1;transl_table=11
NZ_PYKF01000661.1	RefSeq	gene	2304	3092	.	-	.	ID=gene-C9F04_RS20260;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9F04_RS20260;old_locus_tag=C9F04_20920
NZ_PYKF01000661.1	Protein Homology	CDS	2304	3092	.	-	0	ID=cds-WP_000533526.1;Parent=gene-C9F04_RS20260;Dbxref=Genbank:WP_000533526.1;Name=WP_000533526.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533526.1;locus_tag=C9F04_RS20260;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533526.1;transl_table=11
NZ_PYKF01000661.1	RefSeq	gene	3985	5493	.	-	.	ID=gene-C9F04_RS20265;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9F04_RS20265;old_locus_tag=C9F04_20930
NZ_PYKF01000661.1	Protein Homology	CDS	3985	5493	.	-	0	ID=cds-WP_146713079.1;Parent=gene-C9F04_RS20265;Dbxref=Genbank:WP_146713079.1;Name=WP_146713079.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016021;gbkey=CDS;gene=putP;go_component=integral component of membrane|0016021||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9F04_RS20265;product=sodium/proline symporter PutP;protein_id=WP_146713079.1;transl_table=11
NZ_PYKF01000661.1	RefSeq	gene	5915	7570	.	+	.	ID=gene-C9F04_RS20270;Name=C9F04_RS20270;end_range=7570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20270;old_locus_tag=C9F04_20935;partial=true
NZ_PYKF01000661.1	Protein Homology	CDS	5915	7570	.	+	0	ID=cds-WP_186799062.1;Parent=gene-C9F04_RS20270;Dbxref=Genbank:WP_186799062.1;Name=WP_186799062.1;end_range=7570,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9F04_RS20270;partial=true;product=proline dehydrogenase family protein;protein_id=WP_186799062.1;transl_table=11
##sequence-region NZ_PYKF01000212.1 1 7548
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000212.1	RefSeq	region	1	7548	.	+	.	ID=NZ_PYKF01000212.1:1..7548;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000212.1	RefSeq	pseudogene	1	1627	.	+	.	ID=gene-C9F04_RS05255;Name=C9F04_RS05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05255;old_locus_tag=C9F04_05430;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000212.1	Protein Homology	CDS	1	1627	.	+	1	ID=cds-C9F04_RS05255;Parent=gene-C9F04_RS05255;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785382.1;locus_tag=C9F04_RS05255;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	1644	2093	.	+	.	ID=gene-C9F04_RS05260;Name=C9F04_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05260;old_locus_tag=C9F04_05435
NZ_PYKF01000212.1	Protein Homology	CDS	1644	2093	.	+	0	ID=cds-WP_001033736.1;Parent=gene-C9F04_RS05260;Dbxref=Genbank:WP_001033736.1;Name=WP_001033736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033736.1;locus_tag=C9F04_RS05260;product=hypothetical protein;protein_id=WP_001033736.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	2153	3493	.	+	.	ID=gene-C9F04_RS05265;Name=C9F04_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05265;old_locus_tag=C9F04_05440
NZ_PYKF01000212.1	Protein Homology	CDS	2153	3493	.	+	0	ID=cds-WP_135369400.1;Parent=gene-C9F04_RS05265;Dbxref=Genbank:WP_135369400.1;Name=WP_135369400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=C9F04_RS05265;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_135369400.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	3490	4548	.	+	.	ID=gene-C9F04_RS05270;Name=C9F04_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05270;old_locus_tag=C9F04_05445
NZ_PYKF01000212.1	Protein Homology	CDS	3490	4548	.	+	0	ID=cds-WP_135369401.1;Parent=gene-C9F04_RS05270;Dbxref=Genbank:WP_135369401.1;Name=WP_135369401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=C9F04_RS05270;product=baseplate protein;protein_id=WP_135369401.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	4548	5081	.	+	.	ID=gene-C9F04_RS05275;Name=C9F04_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05275;old_locus_tag=C9F04_05450
NZ_PYKF01000212.1	Protein Homology	CDS	4548	5081	.	+	0	ID=cds-WP_001273647.1;Parent=gene-C9F04_RS05275;Dbxref=Genbank:WP_001273647.1;Name=WP_001273647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=C9F04_RS05275;product=phage baseplate assembly protein;protein_id=WP_001273647.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	5086	5499	.	+	.	ID=gene-C9F04_RS05280;Name=C9F04_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05280;old_locus_tag=C9F04_05455
NZ_PYKF01000212.1	Protein Homology	CDS	5086	5499	.	+	0	ID=cds-WP_000605051.1;Parent=gene-C9F04_RS05280;Dbxref=Genbank:WP_000605051.1;Name=WP_000605051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=C9F04_RS05280;product=phage GP46 family protein;protein_id=WP_000605051.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	5492	6571	.	+	.	ID=gene-C9F04_RS05285;Name=C9F04_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05285;old_locus_tag=C9F04_05460
NZ_PYKF01000212.1	Protein Homology	CDS	5492	6571	.	+	0	ID=cds-WP_135369402.1;Parent=gene-C9F04_RS05285;Dbxref=Genbank:WP_135369402.1;Name=WP_135369402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=C9F04_RS05285;product=baseplate J/gp47 family protein;protein_id=WP_135369402.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	gene	6574	7161	.	+	.	ID=gene-C9F04_RS05290;Name=C9F04_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05290;old_locus_tag=C9F04_05465
NZ_PYKF01000212.1	Protein Homology	CDS	6574	7161	.	+	0	ID=cds-WP_146712383.1;Parent=gene-C9F04_RS05290;Dbxref=Genbank:WP_146712383.1;Name=WP_146712383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=C9F04_RS05290;product=DUF2313 domain-containing protein;protein_id=WP_146712383.1;transl_table=11
NZ_PYKF01000212.1	RefSeq	pseudogene	7148	7548	.	+	.	ID=gene-C9F04_RS05295;Name=C9F04_RS05295;end_range=7548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05295;old_locus_tag=C9F04_05470;partial=true;pseudo=true
NZ_PYKF01000212.1	Protein Homology	CDS	7148	7548	.	+	0	ID=cds-C9F04_RS05295;Parent=gene-C9F04_RS05295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7548,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F04_RS05295;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000738.1 1 7545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000738.1	RefSeq	region	1	7545	.	+	.	ID=NZ_PYKF01000738.1:1..7545;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000738.1	RefSeq	pseudogene	1	407	.	+	.	ID=gene-C9F04_RS22905;Name=C9F04_RS22905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22905;old_locus_tag=C9F04_23670;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000738.1	Protein Homology	CDS	1	407	.	+	2	ID=cds-C9F04_RS22905;Parent=gene-C9F04_RS22905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9F04_RS22905;partial=true;product=glutamate 5-kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000738.1	RefSeq	gene	419	1669	.	+	.	ID=gene-C9F04_RS22910;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9F04_RS22910;old_locus_tag=C9F04_23675
NZ_PYKF01000738.1	Protein Homology	CDS	419	1669	.	+	0	ID=cds-WP_135369199.1;Parent=gene-C9F04_RS22910;Dbxref=Genbank:WP_135369199.1;Name=WP_135369199.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9F04_RS22910;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_135369199.1;transl_table=11
NZ_PYKF01000738.1	RefSeq	gene	1785	1860	.	+	.	ID=gene-C9F04_RS22915;Name=C9F04_RS22915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS22915;old_locus_tag=C9F04_23680
NZ_PYKF01000738.1	tRNAscan-SE	tRNA	1785	1860	.	+	.	ID=rna-C9F04_RS22915;Parent=gene-C9F04_RS22915;anticodon=(pos:1818..1820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS22915;product=tRNA-Thr
NZ_PYKF01000738.1	tRNAscan-SE	exon	1785	1860	.	+	.	ID=exon-C9F04_RS22915-1;Parent=rna-C9F04_RS22915;anticodon=(pos:1818..1820);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS22915;product=tRNA-Thr
NZ_PYKF01000738.1	RefSeq	pseudogene	2024	2263	.	+	.	ID=gene-C9F04_RS22920;Name=C9F04_RS22920;end_range=2263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22920;old_locus_tag=C9F04_23685;partial=true;pseudo=true
NZ_PYKF01000738.1	Protein Homology	CDS	2024	2263	.	+	0	ID=cds-C9F04_RS22920;Parent=gene-C9F04_RS22920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=C9F04_RS22920;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000738.1	RefSeq	pseudogene	2296	3075	.	-	.	ID=gene-C9F04_RS22925;Name=C9F04_RS22925;end_range=3075,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22925;old_locus_tag=C9F04_23690;partial=true;pseudo=true
NZ_PYKF01000738.1	Protein Homology	CDS	2296	3075	.	-	0	ID=cds-C9F04_RS22925;Parent=gene-C9F04_RS22925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3075,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F04_RS22925;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYKF01000738.1	RefSeq	pseudogene	3077	3791	.	+	.	ID=gene-C9F04_RS22930;Name=C9F04_RS22930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22930;old_locus_tag=C9F04_23695;partial=true;pseudo=true;start_range=.,3077
NZ_PYKF01000738.1	Protein Homology	CDS	3077	3791	.	+	0	ID=cds-C9F04_RS22930;Parent=gene-C9F04_RS22930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003828496.1;locus_tag=C9F04_RS22930;partial=true;product=diol dehydratase reactivase subunit alpha;pseudo=true;start_range=.,3077;transl_table=11
NZ_PYKF01000738.1	RefSeq	gene	3901	4224	.	+	.	ID=gene-C9F04_RS22935;Name=C9F04_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22935;old_locus_tag=C9F04_23700
NZ_PYKF01000738.1	Protein Homology	CDS	3901	4224	.	+	0	ID=cds-WP_001573898.1;Parent=gene-C9F04_RS22935;Dbxref=Genbank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9F04_RS22935;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11
NZ_PYKF01000738.1	RefSeq	gene	4565	5803	.	+	.	ID=gene-C9F04_RS22940;Name=C9F04_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22940;old_locus_tag=C9F04_23705
NZ_PYKF01000738.1	Protein Homology	CDS	4565	5803	.	+	0	ID=cds-WP_135369200.1;Parent=gene-C9F04_RS22940;Dbxref=Genbank:WP_135369200.1;Name=WP_135369200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9F04_RS22940;product=MFS transporter;protein_id=WP_135369200.1;transl_table=11
NZ_PYKF01000738.1	RefSeq	gene	5935	7356	.	+	.	ID=gene-C9F04_RS22945;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F04_RS22945;old_locus_tag=C9F04_23710
NZ_PYKF01000738.1	Protein Homology	CDS	5935	7356	.	+	0	ID=cds-WP_146713226.1;Parent=gene-C9F04_RS22945;Dbxref=Genbank:WP_146713226.1;Name=WP_146713226.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9F04_RS22945;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_146713226.1;transl_table=11
NZ_PYKF01000738.1	RefSeq	pseudogene	7358	7545	.	+	.	ID=gene-C9F04_RS22950;Name=C9F04_RS22950;end_range=7545,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22950;old_locus_tag=C9F04_23715;partial=true;pseudo=true
NZ_PYKF01000738.1	Protein Homology	CDS	7358	7545	.	+	0	ID=cds-C9F04_RS22950;Parent=gene-C9F04_RS22950;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9F04_RS22950;partial=true;product=3-isopropylmalate dehydratase small subunit;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000473.1 1 7520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000473.1	RefSeq	region	1	7520	.	+	.	ID=NZ_PYKF01000473.1:1..7520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000473.1	RefSeq	gene	1	565	.	-	.	ID=gene-C9F04_RS14165;Name=C9F04_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14165;old_locus_tag=C9F04_14625;partial=true;start_range=.,1
NZ_PYKF01000473.1	Protein Homology	CDS	1	565	.	-	0	ID=cds-WP_186799032.1;Parent=gene-C9F04_RS14165;Dbxref=Genbank:WP_186799032.1;Name=WP_186799032.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F04_RS14165;partial=true;product=Hpt domain-containing protein;protein_id=WP_186799032.1;start_range=.,1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	570	1499	.	-	.	ID=gene-C9F04_RS14170;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9F04_RS14170;old_locus_tag=C9F04_14630
NZ_PYKF01000473.1	Protein Homology	CDS	570	1499	.	-	0	ID=cds-WP_000795653.1;Parent=gene-C9F04_RS14170;Dbxref=Genbank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9F04_RS14170;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	1496	2383	.	-	.	ID=gene-C9F04_RS14175;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9F04_RS14175;old_locus_tag=C9F04_14635
NZ_PYKF01000473.1	Protein Homology	CDS	1496	2383	.	-	0	ID=cds-WP_146712788.1;Parent=gene-C9F04_RS14175;Dbxref=Genbank:WP_146712788.1;Name=WP_146712788.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9F04_RS14175;product=flagellar motor stator protein MotA;protein_id=WP_146712788.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	2508	3092	.	-	.	ID=gene-C9F04_RS14180;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9F04_RS14180;old_locus_tag=C9F04_14640
NZ_PYKF01000473.1	Protein Homology	CDS	2508	3092	.	-	0	ID=cds-WP_000605987.1;Parent=gene-C9F04_RS14180;Dbxref=Genbank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9F04_RS14180;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	3089	3430	.	-	.	ID=gene-C9F04_RS14185;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9F04_RS14185;old_locus_tag=C9F04_14645
NZ_PYKF01000473.1	Protein Homology	CDS	3089	3430	.	-	0	ID=cds-WP_001518146.1;Parent=gene-C9F04_RS14185;Dbxref=Genbank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9F04_RS14185;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	4113	4229	.	+	.	ID=gene-C9F04_RS14190;Name=C9F04_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14190;old_locus_tag=C9F04_14650
NZ_PYKF01000473.1	Protein Homology	CDS	4113	4229	.	+	0	ID=cds-WP_031609601.1;Parent=gene-C9F04_RS14190;Dbxref=Genbank:WP_031609601.1;Name=WP_031609601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9F04_RS14190;product=hypothetical protein;protein_id=WP_031609601.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	4226	4654	.	+	.	ID=gene-C9F04_RS14195;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9F04_RS14195;old_locus_tag=C9F04_14655
NZ_PYKF01000473.1	Protein Homology	CDS	4226	4654	.	+	0	ID=cds-WP_000122606.1;Parent=gene-C9F04_RS14195;Dbxref=Genbank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9F04_RS14195;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	4672	6093	.	-	.	ID=gene-C9F04_RS14200;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9F04_RS14200;old_locus_tag=C9F04_14660
NZ_PYKF01000473.1	Protein Homology	CDS	4672	6093	.	-	0	ID=cds-WP_146712789.1;Parent=gene-C9F04_RS14200;Dbxref=Genbank:WP_146712789.1;Name=WP_146712789.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9F04_RS14200;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_146712789.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	gene	6068	6871	.	-	.	ID=gene-C9F04_RS14205;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9F04_RS14205;old_locus_tag=C9F04_14665
NZ_PYKF01000473.1	Protein Homology	CDS	6068	6871	.	-	0	ID=cds-WP_000840114.1;Parent=gene-C9F04_RS14205;Dbxref=Genbank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9F04_RS14205;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11
NZ_PYKF01000473.1	RefSeq	pseudogene	7094	7274	.	-	.	ID=gene-C9F04_RS14210;Name=araH;end_range=7274,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9F04_RS14210;old_locus_tag=C9F04_14670;partial=true;pseudo=true
NZ_PYKF01000473.1	Protein Homology	CDS	7094	7274	.	-	0	ID=cds-C9F04_RS14210;Parent=gene-C9F04_RS14210;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7274,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=C9F04_RS14210;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11
NZ_PYKF01000473.1	RefSeq	pseudogene	7386	7520	.	-	.	ID=gene-C9F04_RS14215;Name=C9F04_RS14215;end_range=7520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14215;old_locus_tag=C9F04_14675;partial=true;pseudo=true
NZ_PYKF01000473.1	Protein Homology	CDS	7386	7520	.	-	0	ID=cds-C9F04_RS14215;Parent=gene-C9F04_RS14215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9F04_RS14215;partial=true;product=DJ-1 family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000059.1 1 7349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000059.1	RefSeq	region	1	7349	.	+	.	ID=NZ_PYKF01000059.1:1..7349;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000059.1	RefSeq	gene	3	998	.	+	.	ID=gene-C9F04_RS01075;Name=C9F04_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01075;old_locus_tag=C9F04_01140
NZ_PYKF01000059.1	Protein Homology	CDS	3	998	.	+	0	ID=cds-WP_261770727.1;Parent=gene-C9F04_RS01075;Dbxref=Genbank:WP_261770727.1;Name=WP_261770727.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=C9F04_RS01075;product=IS110 family transposase;protein_id=WP_261770727.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	pseudogene	1224	1340	.	-	.	ID=gene-C9F04_RS01080;Name=C9F04_RS01080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01080;old_locus_tag=C9F04_01145;partial=true;pseudo=true;start_range=.,1224
NZ_PYKF01000059.1	Protein Homology	CDS	1224	1340	.	-	0	ID=cds-C9F04_RS01080;Parent=gene-C9F04_RS01080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=C9F04_RS01080;partial=true;product=transposase;pseudo=true;start_range=.,1224;transl_table=11
NZ_PYKF01000059.1	RefSeq	pseudogene	1423	1521	.	-	.	ID=gene-C9F04_RS26860;Name=C9F04_RS26860;end_range=1521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26860;old_locus_tag=C9F04_01150;partial=true;pseudo=true;start_range=.,1423
NZ_PYKF01000059.1	Protein Homology	CDS	1423	1521	.	-	0	ID=cds-C9F04_RS26860;Parent=gene-C9F04_RS26860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=C9F04_RS26860;partial=true;product=integrase;pseudo=true;start_range=.,1423;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	1770	1857	.	-	.	ID=gene-C9F04_RS01095;Name=C9F04_RS01095;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS01095;old_locus_tag=C9F04_01155
NZ_PYKF01000059.1	tRNAscan-SE	tRNA	1770	1857	.	-	.	ID=rna-C9F04_RS01095;Parent=gene-C9F04_RS01095;anticodon=(pos:complement(1821..1823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS01095;product=tRNA-Ser
NZ_PYKF01000059.1	tRNAscan-SE	exon	1770	1857	.	-	.	ID=exon-C9F04_RS01095-1;Parent=rna-C9F04_RS01095;anticodon=(pos:complement(1821..1823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS01095;product=tRNA-Ser
NZ_PYKF01000059.1	RefSeq	gene	2093	3031	.	+	.	ID=gene-C9F04_RS01105;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9F04_RS01105;old_locus_tag=C9F04_01165
NZ_PYKF01000059.1	Protein Homology	CDS	2093	3031	.	+	0	ID=cds-WP_000402551.1;Parent=gene-C9F04_RS01105;Dbxref=Genbank:WP_000402551.1;Name=WP_000402551.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9F04_RS01105;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402551.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	3116	3853	.	+	.	ID=gene-C9F04_RS01110;Name=C9F04_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01110;old_locus_tag=C9F04_01170
NZ_PYKF01000059.1	Protein Homology	CDS	3116	3853	.	+	0	ID=cds-WP_000283643.1;Parent=gene-C9F04_RS01110;Dbxref=Genbank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9F04_RS01110;product=phosphatase;protein_id=WP_000283643.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	3877	4431	.	+	.	ID=gene-C9F04_RS01115;Name=C9F04_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01115;old_locus_tag=C9F04_01175
NZ_PYKF01000059.1	Protein Homology	CDS	3877	4431	.	+	0	ID=cds-WP_001001883.1;Parent=gene-C9F04_RS01115;Dbxref=Genbank:WP_001001883.1;Name=WP_001001883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9F04_RS01115;product=molecular chaperone;protein_id=WP_001001883.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	4532	5014	.	+	.	ID=gene-C9F04_RS01120;Name=C9F04_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01120;old_locus_tag=C9F04_01180
NZ_PYKF01000059.1	Protein Homology	CDS	4532	5014	.	+	0	ID=cds-WP_001546652.1;Parent=gene-C9F04_RS01120;Dbxref=Genbank:WP_001546652.1;Name=WP_001546652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9F04_RS01120;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	5122	5580	.	-	.	ID=gene-C9F04_RS01130;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9F04_RS01130;old_locus_tag=C9F04_01190
NZ_PYKF01000059.1	Protein Homology	CDS	5122	5580	.	-	0	ID=cds-WP_000502119.1;Parent=gene-C9F04_RS01130;Dbxref=Genbank:WP_000502119.1;Name=WP_000502119.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=C9F04_RS01130;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	5764	6597	.	-	.	ID=gene-C9F04_RS01135;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9F04_RS01135;old_locus_tag=C9F04_01200
NZ_PYKF01000059.1	Protein Homology	CDS	5764	6597	.	-	0	ID=cds-WP_001137620.1;Parent=gene-C9F04_RS01135;Dbxref=Genbank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9F04_RS01135;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	6624	7040	.	-	.	ID=gene-C9F04_RS01140;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9F04_RS01140;old_locus_tag=C9F04_01205
NZ_PYKF01000059.1	Protein Homology	CDS	6624	7040	.	-	0	ID=cds-WP_001264073.1;Parent=gene-C9F04_RS01140;Dbxref=Genbank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9F04_RS01140;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11
NZ_PYKF01000059.1	RefSeq	gene	7067	7349	.	-	.	ID=gene-C9F04_RS01145;Name=csgE;end_range=7349,.;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9F04_RS01145;old_locus_tag=C9F04_01210;partial=true
NZ_PYKF01000059.1	Protein Homology	CDS	7067	7349	.	-	1	ID=cds-WP_146712178.1;Parent=gene-C9F04_RS01145;Dbxref=Genbank:WP_146712178.1;Name=WP_146712178.1;end_range=7349,.;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9F04_RS01145;partial=true;product=curli production assembly/transport protein CsgE;protein_id=WP_146712178.1;transl_table=11
##sequence-region NZ_PYKF01000280.1 1 20892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000280.1	RefSeq	region	1	20892	.	+	.	ID=NZ_PYKF01000280.1:1..20892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000280.1	RefSeq	pseudogene	1	272	.	+	.	ID=gene-C9F04_RS07865;Name=C9F04_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07865;old_locus_tag=C9F04_08135;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000280.1	Protein Homology	CDS	1	272	.	+	2	ID=cds-C9F04_RS07865;Parent=gene-C9F04_RS07865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=C9F04_RS07865;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	289	891	.	+	.	ID=gene-C9F04_RS07870;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=C9F04_RS07870;old_locus_tag=C9F04_08140
NZ_PYKF01000280.1	Protein Homology	CDS	289	891	.	+	0	ID=cds-WP_023224615.1;Parent=gene-C9F04_RS07870;Dbxref=Genbank:WP_023224615.1;Name=WP_023224615.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=C9F04_RS07870;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_023224615.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	914	1972	.	+	.	ID=gene-C9F04_RS07875;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9F04_RS07875;old_locus_tag=C9F04_08145
NZ_PYKF01000280.1	Protein Homology	CDS	914	1972	.	+	0	ID=cds-WP_001537534.1;Parent=gene-C9F04_RS07875;Dbxref=Genbank:WP_001537534.1;Name=WP_001537534.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=C9F04_RS07875;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001537534.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	1982	2707	.	+	.	ID=gene-C9F04_RS07880;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9F04_RS07880;old_locus_tag=C9F04_08150
NZ_PYKF01000280.1	Protein Homology	CDS	1982	2707	.	+	0	ID=cds-WP_135369065.1;Parent=gene-C9F04_RS07880;Dbxref=Genbank:WP_135369065.1;Name=WP_135369065.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=C9F04_RS07880;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_135369065.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	2707	3411	.	+	.	ID=gene-C9F04_RS07885;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9F04_RS07885;old_locus_tag=C9F04_08155
NZ_PYKF01000280.1	Protein Homology	CDS	2707	3411	.	+	0	ID=cds-WP_001748704.1;Parent=gene-C9F04_RS07885;Dbxref=Genbank:WP_001748704.1;Name=WP_001748704.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=C9F04_RS07885;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_001748704.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	3411	4328	.	+	.	ID=gene-C9F04_RS07890;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9F04_RS07890;old_locus_tag=C9F04_08160
NZ_PYKF01000280.1	Protein Homology	CDS	3411	4328	.	+	0	ID=cds-WP_000118674.1;Parent=gene-C9F04_RS07890;Dbxref=Genbank:WP_000118674.1;Name=WP_000118674.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=C9F04_RS07890;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000118674.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	4331	4624	.	+	.	ID=gene-C9F04_RS07895;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9F04_RS07895;old_locus_tag=C9F04_08165
NZ_PYKF01000280.1	Protein Homology	CDS	4331	4624	.	+	0	ID=cds-WP_080201091.1;Parent=gene-C9F04_RS07895;Dbxref=Genbank:WP_080201091.1;Name=WP_080201091.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=C9F04_RS07895;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_080201091.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	direct_repeat	4709	5592	.	+	.	ID=id-NZ_PYKF01000280.1:4709..5592;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=4709..4737;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_PYKF01000280.1	RefSeq	gene	5607	6653	.	-	.	ID=gene-C9F04_RS07900;Name=C9F04_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07900;old_locus_tag=C9F04_08170
NZ_PYKF01000280.1	Protein Homology	CDS	5607	6653	.	-	0	ID=cds-WP_000490481.1;Parent=gene-C9F04_RS07900;Dbxref=Genbank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9F04_RS07900;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	6904	7812	.	+	.	ID=gene-C9F04_RS07905;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9F04_RS07905;old_locus_tag=C9F04_08175
NZ_PYKF01000280.1	Protein Homology	CDS	6904	7812	.	+	0	ID=cds-WP_000372384.1;Parent=gene-C9F04_RS07905;Dbxref=Genbank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9F04_RS07905;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	7822	9261	.	+	.	ID=gene-C9F04_RS07910;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9F04_RS07910;old_locus_tag=C9F04_08180
NZ_PYKF01000280.1	Protein Homology	CDS	7822	9261	.	+	0	ID=cds-WP_001092256.1;Parent=gene-C9F04_RS07910;Dbxref=Genbank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9F04_RS07910;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	9248	9853	.	+	.	ID=gene-C9F04_RS07915;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9F04_RS07915;old_locus_tag=C9F04_08185
NZ_PYKF01000280.1	Protein Homology	CDS	9248	9853	.	+	0	ID=cds-WP_001173663.1;Parent=gene-C9F04_RS07915;Dbxref=Genbank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9F04_RS07915;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	9904	10227	.	+	.	ID=gene-C9F04_RS07920;Name=C9F04_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07920;old_locus_tag=C9F04_08190
NZ_PYKF01000280.1	Protein Homology	CDS	9904	10227	.	+	0	ID=cds-WP_001537530.1;Parent=gene-C9F04_RS07920;Dbxref=Genbank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=C9F04_RS07920;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	10418	10729	.	+	.	ID=gene-C9F04_RS07925;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9F04_RS07925;old_locus_tag=C9F04_08195
NZ_PYKF01000280.1	Protein Homology	CDS	10418	10729	.	+	0	ID=cds-WP_146712489.1;Parent=gene-C9F04_RS07925;Dbxref=Genbank:WP_146712489.1;Name=WP_146712489.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9F04_RS07925;product=cell division protein FtsB;protein_id=WP_146712489.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	10748	11458	.	+	.	ID=gene-C9F04_RS07930;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9F04_RS07930;old_locus_tag=C9F04_08200
NZ_PYKF01000280.1	Protein Homology	CDS	10748	11458	.	+	0	ID=cds-WP_146712490.1;Parent=gene-C9F04_RS07930;Dbxref=Genbank:WP_146712490.1;Name=WP_146712490.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9F04_RS07930;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_146712490.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	11458	11937	.	+	.	ID=gene-C9F04_RS07935;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9F04_RS07935;old_locus_tag=C9F04_08205
NZ_PYKF01000280.1	Protein Homology	CDS	11458	11937	.	+	0	ID=cds-WP_001219244.1;Parent=gene-C9F04_RS07935;Dbxref=Genbank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9F04_RS07935;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	11934	12983	.	+	.	ID=gene-C9F04_RS07940;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9F04_RS07940;old_locus_tag=C9F04_08210
NZ_PYKF01000280.1	Protein Homology	CDS	11934	12983	.	+	0	ID=cds-WP_000134246.1;Parent=gene-C9F04_RS07940;Dbxref=Genbank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9F04_RS07940;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	12964	13725	.	+	.	ID=gene-C9F04_RS07945;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9F04_RS07945;old_locus_tag=C9F04_08215
NZ_PYKF01000280.1	Protein Homology	CDS	12964	13725	.	+	0	ID=cds-WP_001221538.1;Parent=gene-C9F04_RS07945;Dbxref=Genbank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9F04_RS07945;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	13719	14345	.	+	.	ID=gene-C9F04_RS07950;Name=C9F04_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07950;old_locus_tag=C9F04_08220
NZ_PYKF01000280.1	Protein Homology	CDS	13719	14345	.	+	0	ID=cds-WP_000253545.1;Parent=gene-C9F04_RS07950;Dbxref=Genbank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F04_RS07950;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	14484	14642	.	-	.	ID=gene-C9F04_RS26970;Name=C9F04_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26970
NZ_PYKF01000280.1	Protein Homology	CDS	14484	14642	.	-	0	ID=cds-WP_223148970.1;Parent=gene-C9F04_RS26970;Dbxref=Genbank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9F04_RS26970;product=peptidase;protein_id=WP_223148970.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	14572	15654	.	+	.	ID=gene-C9F04_RS07955;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9F04_RS07955;old_locus_tag=C9F04_08225
NZ_PYKF01000280.1	Protein Homology	CDS	14572	15654	.	+	0	ID=cds-WP_223149274.1;Parent=gene-C9F04_RS07955;Dbxref=Genbank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9F04_RS07955;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	15717	16709	.	+	.	ID=gene-C9F04_RS07960;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9F04_RS07960;old_locus_tag=C9F04_08230
NZ_PYKF01000280.1	Protein Homology	CDS	15717	16709	.	+	0	ID=cds-WP_000081498.1;Parent=gene-C9F04_RS07960;Dbxref=Genbank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9F04_RS07960;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	16754	16990	.	-	.	ID=gene-C9F04_RS07965;Name=C9F04_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07965;old_locus_tag=C9F04_08235
NZ_PYKF01000280.1	Protein Homology	CDS	16754	16990	.	-	0	ID=cds-WP_000562964.1;Parent=gene-C9F04_RS07965;Dbxref=Genbank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9F04_RS07965;product=hypothetical protein;protein_id=WP_000562964.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	17001	18428	.	-	.	ID=gene-C9F04_RS07970;Name=C9F04_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07970;old_locus_tag=C9F04_08240
NZ_PYKF01000280.1	Protein Homology	CDS	17001	18428	.	-	0	ID=cds-WP_000863168.1;Parent=gene-C9F04_RS07970;Dbxref=Genbank:WP_000863168.1;Name=WP_000863168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9F04_RS07970;product=UbiD family decarboxylase;protein_id=WP_000863168.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	18428	19021	.	-	.	ID=gene-C9F04_RS07975;Name=C9F04_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07975;old_locus_tag=C9F04_08245
NZ_PYKF01000280.1	Protein Homology	CDS	18428	19021	.	-	0	ID=cds-WP_001237180.1;Parent=gene-C9F04_RS07975;Dbxref=Genbank:WP_001237180.1;Name=WP_001237180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9F04_RS07975;product=UbiX family flavin prenyltransferase;protein_id=WP_001237180.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	19192	19596	.	+	.	ID=gene-C9F04_RS07980;Name=C9F04_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07980;old_locus_tag=C9F04_08250
NZ_PYKF01000280.1	Protein Homology	CDS	19192	19596	.	+	0	ID=cds-WP_000423338.1;Parent=gene-C9F04_RS07980;Dbxref=Genbank:WP_000423338.1;Name=WP_000423338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9F04_RS07980;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	19615	20379	.	-	.	ID=gene-C9F04_RS07985;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9F04_RS07985;old_locus_tag=C9F04_08255
NZ_PYKF01000280.1	Protein Homology	CDS	19615	20379	.	-	0	ID=cds-WP_000613184.1;Parent=gene-C9F04_RS07985;Dbxref=Genbank:WP_000613184.1;Name=WP_000613184.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9F04_RS07985;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613184.1;transl_table=11
NZ_PYKF01000280.1	RefSeq	gene	20576	20892	.	+	.	ID=gene-C9F04_RS07990;Name=C9F04_RS07990;end_range=20892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07990;old_locus_tag=C9F04_08260;partial=true
NZ_PYKF01000280.1	Protein Homology	CDS	20576	20892	.	+	0	ID=cds-WP_261770762.1;Parent=gene-C9F04_RS07990;Dbxref=Genbank:WP_261770762.1;Name=WP_261770762.1;Ontology_term=GO:0050661;end_range=20892,.;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245021.1;locus_tag=C9F04_RS07990;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_261770762.1;transl_table=11
##sequence-region NZ_PYKF01000636.1 1 7247
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000636.1	RefSeq	region	1	7247	.	+	.	ID=NZ_PYKF01000636.1:1..7247;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000636.1	RefSeq	gene	61	453	.	+	.	ID=gene-C9F04_RS19500;Name=C9F04_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19500;old_locus_tag=C9F04_20135
NZ_PYKF01000636.1	Protein Homology	CDS	61	453	.	+	0	ID=cds-WP_000731552.1;Parent=gene-C9F04_RS19500;Dbxref=Genbank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9F04_RS19500;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11
NZ_PYKF01000636.1	RefSeq	gene	525	1391	.	+	.	ID=gene-C9F04_RS19505;Name=C9F04_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19505;old_locus_tag=C9F04_20140
NZ_PYKF01000636.1	Protein Homology	CDS	525	1391	.	+	0	ID=cds-WP_000998795.1;Parent=gene-C9F04_RS19505;Dbxref=Genbank:WP_000998795.1;Name=WP_000998795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9F04_RS19505;product=AraC family transcriptional regulator;protein_id=WP_000998795.1;transl_table=11
NZ_PYKF01000636.1	RefSeq	gene	1502	3760	.	+	.	ID=gene-C9F04_RS19510;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9F04_RS19510;old_locus_tag=C9F04_20145
NZ_PYKF01000636.1	Protein Homology	CDS	1502	3760	.	+	0	ID=cds-WP_001281855.1;Parent=gene-C9F04_RS19510;Dbxref=Genbank:WP_001281855.1;Name=WP_001281855.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9F04_RS19510;product=DNA topoisomerase IV subunit A;protein_id=WP_001281855.1;transl_table=11
NZ_PYKF01000636.1	RefSeq	gene	4017	4754	.	+	.	ID=gene-C9F04_RS19515;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9F04_RS19515;old_locus_tag=C9F04_20150
NZ_PYKF01000636.1	Protein Homology	CDS	4017	4754	.	+	0	ID=cds-WP_000965730.1;Parent=gene-C9F04_RS19515;Dbxref=Genbank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9F04_RS19515;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11
NZ_PYKF01000636.1	RefSeq	gene	4828	6240	.	+	.	ID=gene-C9F04_RS19520;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9F04_RS19520;old_locus_tag=C9F04_20155
NZ_PYKF01000636.1	Protein Homology	CDS	4828	6240	.	+	0	ID=cds-WP_146713046.1;Parent=gene-C9F04_RS19520;Dbxref=Genbank:WP_146713046.1;Name=WP_146713046.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9F04_RS19520;product=cell division protein FtsP;protein_id=WP_146713046.1;transl_table=11
NZ_PYKF01000636.1	RefSeq	gene	6285	7247	.	-	.	ID=gene-C9F04_RS19525;Name=C9F04_RS19525;end_range=7247,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19525;old_locus_tag=C9F04_20160;partial=true
NZ_PYKF01000636.1	Protein Homology	CDS	6285	7247	.	-	0	ID=cds-WP_146713047.1;Parent=gene-C9F04_RS19525;Dbxref=Genbank:WP_146713047.1;Name=WP_146713047.1;Ontology_term=GO:0015740,GO:0015556,GO:0005887,GO:0031317;end_range=7247,.;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9F04_RS19525;partial=true;product=TRAP transporter large permease subunit;protein_id=WP_146713047.1;transl_table=11
##sequence-region NZ_PYKF01000360.1 1 7217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000360.1	RefSeq	region	1	7217	.	+	.	ID=NZ_PYKF01000360.1:1..7217;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000360.1	RefSeq	gene	1	724	.	-	.	ID=gene-C9F04_RS10590;Name=C9F04_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10590;old_locus_tag=C9F04_10925;partial=true;start_range=.,1
NZ_PYKF01000360.1	Protein Homology	CDS	1	724	.	-	0	ID=cds-WP_186799019.1;Parent=gene-C9F04_RS10590;Dbxref=Genbank:WP_186799019.1;Name=WP_186799019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F04_RS10590;partial=true;product=metallophosphatase;protein_id=WP_186799019.1;start_range=.,1;transl_table=11
NZ_PYKF01000360.1	RefSeq	gene	860	1984	.	+	.	ID=gene-C9F04_RS10595;Name=C9F04_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10595;old_locus_tag=C9F04_10930
NZ_PYKF01000360.1	Protein Homology	CDS	860	1984	.	+	0	ID=cds-WP_001134811.1;Parent=gene-C9F04_RS10595;Dbxref=Genbank:WP_001134811.1;Name=WP_001134811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9F04_RS10595;product=hypothetical protein;protein_id=WP_001134811.1;transl_table=11
NZ_PYKF01000360.1	RefSeq	gene	2219	3217	.	+	.	ID=gene-C9F04_RS10600;Name=C9F04_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10600;old_locus_tag=C9F04_10935
NZ_PYKF01000360.1	Protein Homology	CDS	2219	3217	.	+	0	ID=cds-WP_135369096.1;Parent=gene-C9F04_RS10600;Dbxref=Genbank:WP_135369096.1;Name=WP_135369096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9F04_RS10600;product=hypothetical protein;protein_id=WP_135369096.1;transl_table=11
NZ_PYKF01000360.1	RefSeq	gene	3220	4077	.	+	.	ID=gene-C9F04_RS10605;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9F04_RS10605;old_locus_tag=C9F04_10940
NZ_PYKF01000360.1	Protein Homology	CDS	3220	4077	.	+	0	ID=cds-WP_000398249.1;Parent=gene-C9F04_RS10605;Dbxref=Genbank:WP_000398249.1;Name=WP_000398249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9F04_RS10605;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398249.1;transl_table=11
NZ_PYKF01000360.1	RefSeq	gene	4193	6625	.	-	.	ID=gene-C9F04_RS10610;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=C9F04_RS10610;old_locus_tag=C9F04_10945
NZ_PYKF01000360.1	Protein Homology	CDS	4193	6625	.	-	0	ID=cds-WP_000110811.1;Parent=gene-C9F04_RS10610;Dbxref=Genbank:WP_000110811.1;Name=WP_000110811.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9F04_RS10610;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110811.1;transl_table=11
NZ_PYKF01000360.1	RefSeq	pseudogene	6628	7146	.	-	.	ID=gene-C9F04_RS10615;Name=C9F04_RS10615;end_range=7146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10615;old_locus_tag=C9F04_10950;partial=true;pseudo=true
NZ_PYKF01000360.1	Protein Homology	CDS	6628	7146	.	-	0	ID=cds-C9F04_RS10615;Parent=gene-C9F04_RS10615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=7146,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9F04_RS10615;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000409.1 1 7215
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000409.1	RefSeq	region	1	7215	.	+	.	ID=NZ_PYKF01000409.1:1..7215;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000409.1	RefSeq	gene	1	1043	.	-	.	ID=gene-C9F04_RS12115;Name=C9F04_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12115;old_locus_tag=C9F04_12530;partial=true;start_range=.,1
NZ_PYKF01000409.1	Protein Homology	CDS	1	1043	.	-	0	ID=cds-WP_146712683.1;Parent=gene-C9F04_RS12115;Dbxref=Genbank:WP_146712683.1;Name=WP_146712683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132367.1;locus_tag=C9F04_RS12115;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_146712683.1;start_range=.,1;transl_table=11
NZ_PYKF01000409.1	RefSeq	gene	1307	2368	.	+	.	ID=gene-C9F04_RS12120;Name=C9F04_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12120;old_locus_tag=C9F04_12535
NZ_PYKF01000409.1	Protein Homology	CDS	1307	2368	.	+	0	ID=cds-WP_135369600.1;Parent=gene-C9F04_RS12120;Dbxref=Genbank:WP_135369600.1;Name=WP_135369600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9F04_RS12120;product=YncE family protein;protein_id=WP_135369600.1;transl_table=11
NZ_PYKF01000409.1	RefSeq	gene	2513	2734	.	+	.	ID=gene-C9F04_RS12125;Name=C9F04_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12125;old_locus_tag=C9F04_12540
NZ_PYKF01000409.1	Protein Homology	CDS	2513	2734	.	+	0	ID=cds-WP_000732362.1;Parent=gene-C9F04_RS12125;Dbxref=Genbank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9F04_RS12125;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11
NZ_PYKF01000409.1	RefSeq	gene	2811	4304	.	-	.	ID=gene-C9F04_RS12130;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9F04_RS12130;old_locus_tag=C9F04_12545
NZ_PYKF01000409.1	Protein Homology	CDS	2811	4304	.	-	0	ID=cds-WP_000857110.1;Parent=gene-C9F04_RS12130;Dbxref=Genbank:WP_000857110.1;Name=WP_000857110.1;Ontology_term=GO:0006865,GO:0016021;gbkey=CDS;gene=ansP;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9F04_RS12130;product=L-asparagine permease;protein_id=WP_000857110.1;transl_table=11
NZ_PYKF01000409.1	RefSeq	gene	4817	5449	.	+	.	ID=gene-C9F04_RS12140;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9F04_RS12140;old_locus_tag=C9F04_12555
NZ_PYKF01000409.1	Protein Homology	CDS	4817	5449	.	+	0	ID=cds-WP_135369601.1;Parent=gene-C9F04_RS12140;Dbxref=Genbank:WP_135369601.1;Name=WP_135369601.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9F04_RS12140;product=type III secretion system effector SteA;protein_id=WP_135369601.1;transl_table=11
NZ_PYKF01000409.1	RefSeq	gene	5733	6578	.	+	.	ID=gene-C9F04_RS12145;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9F04_RS12145;old_locus_tag=C9F04_12560
NZ_PYKF01000409.1	Protein Homology	CDS	5733	6578	.	+	0	ID=cds-WP_000200329.1;Parent=gene-C9F04_RS12145;Dbxref=Genbank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9F04_RS12145;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11
NZ_PYKF01000409.1	RefSeq	pseudogene	6614	7215	.	-	.	ID=gene-C9F04_RS12150;Name=C9F04_RS12150;end_range=7215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12150;old_locus_tag=C9F04_12565;partial=true;pseudo=true
NZ_PYKF01000409.1	Protein Homology	CDS	6614	7215	.	-	2	ID=cds-C9F04_RS12150;Parent=gene-C9F04_RS12150;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009058,GO:0003824;end_range=7215,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804430.1;locus_tag=C9F04_RS12150;partial=true;product=PhzF family phenazine biosynthesis isomerase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000513.1 1 7199
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000513.1	RefSeq	region	1	7199	.	+	.	ID=NZ_PYKF01000513.1:1..7199;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000513.1	RefSeq	gene	1	483	.	-	.	ID=gene-C9F04_RS15410;Name=C9F04_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15410;old_locus_tag=C9F04_15900;partial=true;start_range=.,1
NZ_PYKF01000513.1	Protein Homology	CDS	1	483	.	-	0	ID=cds-WP_146712842.1;Parent=gene-C9F04_RS15410;Dbxref=Genbank:WP_146712842.1;Name=WP_146712842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9F04_RS15410;partial=true;product=ABC transporter permease;protein_id=WP_146712842.1;start_range=.,1;transl_table=11
NZ_PYKF01000513.1	RefSeq	pseudogene	476	2212	.	-	.	ID=gene-C9F04_RS15415;Name=C9F04_RS15415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15415;old_locus_tag=C9F04_15905;pseudo=true
NZ_PYKF01000513.1	Protein Homology	CDS	476	2212	.	-	0	ID=cds-C9F04_RS15415;Parent=gene-C9F04_RS15415;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9F04_RS15415;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000513.1	RefSeq	gene	2205	3200	.	-	.	ID=gene-C9F04_RS15420;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9F04_RS15420;old_locus_tag=C9F04_15910
NZ_PYKF01000513.1	Protein Homology	CDS	2205	3200	.	-	0	ID=cds-WP_135369186.1;Parent=gene-C9F04_RS15420;Dbxref=Genbank:WP_135369186.1;Name=WP_135369186.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9F04_RS15420;product=secretion protein HlyD;protein_id=WP_135369186.1;transl_table=11
NZ_PYKF01000513.1	RefSeq	gene	3200	3874	.	-	.	ID=gene-C9F04_RS15425;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9F04_RS15425;old_locus_tag=C9F04_15915
NZ_PYKF01000513.1	Protein Homology	CDS	3200	3874	.	-	0	ID=cds-WP_001025254.1;Parent=gene-C9F04_RS15425;Dbxref=Genbank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9F04_RS15425;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11
NZ_PYKF01000513.1	RefSeq	gene	3948	4871	.	-	.	ID=gene-C9F04_RS15430;Name=C9F04_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15430;old_locus_tag=C9F04_15920
NZ_PYKF01000513.1	Protein Homology	CDS	3948	4871	.	-	0	ID=cds-WP_001075547.1;Parent=gene-C9F04_RS15430;Dbxref=Genbank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=C9F04_RS15430;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11
NZ_PYKF01000513.1	RefSeq	gene	5210	6541	.	+	.	ID=gene-C9F04_RS15435;Name=C9F04_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15435;old_locus_tag=C9F04_15925
NZ_PYKF01000513.1	Protein Homology	CDS	5210	6541	.	+	0	ID=cds-WP_001518324.1;Parent=gene-C9F04_RS15435;Dbxref=Genbank:WP_001518324.1;Name=WP_001518324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=C9F04_RS15435;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11
NZ_PYKF01000513.1	RefSeq	gene	6592	7199	.	+	.	ID=gene-C9F04_RS15440;Name=C9F04_RS15440;end_range=7199,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15440;old_locus_tag=C9F04_15930;partial=true
NZ_PYKF01000513.1	Protein Homology	CDS	6592	7199	.	+	0	ID=cds-WP_146712843.1;Parent=gene-C9F04_RS15440;Dbxref=Genbank:WP_146712843.1;Name=WP_146712843.1;end_range=7199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=C9F04_RS15440;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_146712843.1;transl_table=11
##sequence-region NZ_PYKF01000383.1 1 7190
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000383.1	RefSeq	region	1	7190	.	+	.	ID=NZ_PYKF01000383.1:1..7190;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000383.1	RefSeq	gene	1	76	.	-	.	ID=gene-C9F04_RS11260;Name=C9F04_RS11260;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS11260;old_locus_tag=C9F04_11635
NZ_PYKF01000383.1	tRNAscan-SE	tRNA	1	76	.	-	.	ID=rna-C9F04_RS11260;Parent=gene-C9F04_RS11260;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11260;product=tRNA-Lys
NZ_PYKF01000383.1	tRNAscan-SE	exon	1	76	.	-	.	ID=exon-C9F04_RS11260-1;Parent=rna-C9F04_RS11260;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11260;product=tRNA-Lys
NZ_PYKF01000383.1	RefSeq	gene	80	155	.	-	.	ID=gene-C9F04_RS11265;Name=C9F04_RS11265;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS11265;old_locus_tag=C9F04_11640
NZ_PYKF01000383.1	tRNAscan-SE	tRNA	80	155	.	-	.	ID=rna-C9F04_RS11265;Parent=gene-C9F04_RS11265;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11265;product=tRNA-Val
NZ_PYKF01000383.1	tRNAscan-SE	exon	80	155	.	-	.	ID=exon-C9F04_RS11265-1;Parent=rna-C9F04_RS11265;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11265;product=tRNA-Val
NZ_PYKF01000383.1	RefSeq	gene	292	367	.	-	.	ID=gene-C9F04_RS11270;Name=C9F04_RS11270;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS11270;old_locus_tag=C9F04_11645
NZ_PYKF01000383.1	tRNAscan-SE	tRNA	292	367	.	-	.	ID=rna-C9F04_RS11270;Parent=gene-C9F04_RS11270;anticodon=(pos:complement(332..334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11270;product=tRNA-Lys
NZ_PYKF01000383.1	tRNAscan-SE	exon	292	367	.	-	.	ID=exon-C9F04_RS11270-1;Parent=rna-C9F04_RS11270;anticodon=(pos:complement(332..334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11270;product=tRNA-Lys
NZ_PYKF01000383.1	RefSeq	gene	532	1320	.	-	.	ID=gene-C9F04_RS11275;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9F04_RS11275;old_locus_tag=C9F04_11650
NZ_PYKF01000383.1	Protein Homology	CDS	532	1320	.	-	0	ID=cds-WP_000097547.1;Parent=gene-C9F04_RS11275;Dbxref=Genbank:WP_000097547.1;Name=WP_000097547.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9F04_RS11275;product=cell division protein CpoB;protein_id=WP_000097547.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	1330	1854	.	-	.	ID=gene-C9F04_RS11280;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9F04_RS11280;old_locus_tag=C9F04_11655
NZ_PYKF01000383.1	Protein Homology	CDS	1330	1854	.	-	0	ID=cds-WP_001176621.1;Parent=gene-C9F04_RS11280;Dbxref=Genbank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9F04_RS11280;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	1889	3181	.	-	.	ID=gene-C9F04_RS11285;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9F04_RS11285;old_locus_tag=C9F04_11660
NZ_PYKF01000383.1	Protein Homology	CDS	1889	3181	.	-	0	ID=cds-WP_001562341.1;Parent=gene-C9F04_RS11285;Dbxref=Genbank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9F04_RS11285;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	pseudogene	3305	4213	.	-	.	ID=gene-C9F04_RS11290;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=pseudogene;locus_tag=C9F04_RS11290;old_locus_tag=C9F04_11665;pseudo=true
NZ_PYKF01000383.1	Protein Homology	CDS	3305	4213	.	-	0	ID=cds-C9F04_RS11290;Parent=gene-C9F04_RS11290;Note=internal stop;Ontology_term=GO:0043213,GO:0019534,GO:0016021;gbkey=CDS;gene=tolA;go_component=integral component of membrane|0016021||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9F04_RS11290;product=cell envelope integrity protein TolA;pseudo=true;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	4278	4706	.	-	.	ID=gene-C9F04_RS11295;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9F04_RS11295;old_locus_tag=C9F04_11670
NZ_PYKF01000383.1	Protein Homology	CDS	4278	4706	.	-	0	ID=cds-WP_000124676.1;Parent=gene-C9F04_RS11295;Dbxref=Genbank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9F04_RS11295;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	4710	5402	.	-	.	ID=gene-C9F04_RS11300;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9F04_RS11300;old_locus_tag=C9F04_11675
NZ_PYKF01000383.1	Protein Homology	CDS	4710	5402	.	-	0	ID=cds-WP_000131318.1;Parent=gene-C9F04_RS11300;Dbxref=Genbank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9F04_RS11300;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	5399	5803	.	-	.	ID=gene-C9F04_RS11305;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9F04_RS11305;old_locus_tag=C9F04_11680
NZ_PYKF01000383.1	Protein Homology	CDS	5399	5803	.	-	0	ID=cds-WP_001046240.1;Parent=gene-C9F04_RS11305;Dbxref=Genbank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9F04_RS11305;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	6032	6325	.	-	.	ID=gene-C9F04_RS11310;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9F04_RS11310;old_locus_tag=C9F04_11685
NZ_PYKF01000383.1	Protein Homology	CDS	6032	6325	.	-	0	ID=cds-WP_000148790.1;Parent=gene-C9F04_RS11310;Dbxref=Genbank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9F04_RS11310;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	6325	6438	.	-	.	ID=gene-C9F04_RS11315;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=C9F04_RS11315;old_locus_tag=C9F04_11690
NZ_PYKF01000383.1	Protein Homology	CDS	6325	6438	.	-	0	ID=cds-WP_000270278.1;Parent=gene-C9F04_RS11315;Dbxref=Genbank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9F04_RS11315;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11
NZ_PYKF01000383.1	RefSeq	gene	6453	7190	.	-	.	ID=gene-C9F04_RS11320;Name=cydB;end_range=7190,.;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F04_RS11320;old_locus_tag=C9F04_11695;partial=true
NZ_PYKF01000383.1	Protein Homology	CDS	6453	7190	.	-	0	ID=cds-WP_146712647.1;Parent=gene-C9F04_RS11320;Dbxref=Genbank:WP_146712647.1;Name=WP_146712647.1;Ontology_term=GO:0016682;end_range=7190,.;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F04_RS11320;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_146712647.1;transl_table=11
##sequence-region NZ_PYKF01000096.1 1 7188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000096.1	RefSeq	region	1	7188	.	+	.	ID=NZ_PYKF01000096.1:1..7188;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000096.1	RefSeq	gene	1	578	.	-	.	ID=gene-C9F04_RS01760;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9F04_RS01760;old_locus_tag=C9F04_01845;partial=true;start_range=.,1
NZ_PYKF01000096.1	Protein Homology	CDS	1	578	.	-	0	ID=cds-WP_146712208.1;Parent=gene-C9F04_RS01760;Dbxref=Genbank:WP_146712208.1;Name=WP_146712208.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462959.1;locus_tag=C9F04_RS01760;partial=true;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_146712208.1;start_range=.,1;transl_table=11
NZ_PYKF01000096.1	RefSeq	gene	607	1629	.	-	.	ID=gene-C9F04_RS01765;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9F04_RS01765;old_locus_tag=C9F04_01850
NZ_PYKF01000096.1	Protein Homology	CDS	607	1629	.	-	0	ID=cds-WP_000090737.1;Parent=gene-C9F04_RS01765;Dbxref=Genbank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9F04_RS01765;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11
NZ_PYKF01000096.1	RefSeq	gene	1658	2659	.	-	.	ID=gene-C9F04_RS01770;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9F04_RS01770;old_locus_tag=C9F04_01855
NZ_PYKF01000096.1	Protein Homology	CDS	1658	2659	.	-	0	ID=cds-WP_000981831.1;Parent=gene-C9F04_RS01770;Dbxref=Genbank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9F04_RS01770;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11
NZ_PYKF01000096.1	RefSeq	gene	2656	3699	.	-	.	ID=gene-C9F04_RS01775;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9F04_RS01775;old_locus_tag=C9F04_01860
NZ_PYKF01000096.1	Protein Homology	CDS	2656	3699	.	-	0	ID=cds-WP_146712209.1;Parent=gene-C9F04_RS01775;Dbxref=Genbank:WP_146712209.1;Name=WP_146712209.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9F04_RS01775;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_146712209.1;transl_table=11
NZ_PYKF01000096.1	RefSeq	pseudogene	3693	5228	.	-	.	ID=gene-C9F04_RS01780;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=pseudogene;locus_tag=C9F04_RS01780;old_locus_tag=C9F04_01865;pseudo=true
NZ_PYKF01000096.1	Protein Homology	CDS	3693	5228	.	-	0	ID=cds-C9F04_RS01780;Parent=gene-C9F04_RS01780;Note=internal stop;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;gene=lsrA;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9F04_RS01780;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;pseudo=true;transl_table=11
NZ_PYKF01000096.1	RefSeq	gene	5484	6443	.	+	.	ID=gene-C9F04_RS01785;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9F04_RS01785;old_locus_tag=C9F04_01870
NZ_PYKF01000096.1	Protein Homology	CDS	5484	6443	.	+	0	ID=cds-WP_001283049.1;Parent=gene-C9F04_RS01785;Dbxref=Genbank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9F04_RS01785;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11
NZ_PYKF01000096.1	RefSeq	gene	6530	7188	.	+	.	ID=gene-C9F04_RS01790;Name=C9F04_RS01790;end_range=7188,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01790;old_locus_tag=C9F04_01875;partial=true
NZ_PYKF01000096.1	Protein Homology	CDS	6530	7188	.	+	0	ID=cds-WP_261770736.1;Parent=gene-C9F04_RS01790;Dbxref=Genbank:WP_261770736.1;Name=WP_261770736.1;Ontology_term=GO:0005975,GO:0016773;end_range=7188,.;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9F04_RS01790;partial=true;product=FGGY family carbohydrate kinase;protein_id=WP_261770736.1;transl_table=11
##sequence-region NZ_PYKF01000245.1 1 7125
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000245.1	RefSeq	region	1	7125	.	+	.	ID=NZ_PYKF01000245.1:1..7125;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000245.1	RefSeq	pseudogene	1	176	.	+	.	ID=gene-C9F04_RS06565;Name=C9F04_RS06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06565;old_locus_tag=C9F04_06775;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000245.1	Protein Homology	CDS	1	176	.	+	2	ID=cds-C9F04_RS06565;Parent=gene-C9F04_RS06565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9F04_RS06565;partial=true;product=NAD(P)H nitroreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	294	1337	.	+	.	ID=gene-C9F04_RS06570;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9F04_RS06570;old_locus_tag=C9F04_06780
NZ_PYKF01000245.1	Protein Homology	CDS	294	1337	.	+	0	ID=cds-WP_001294900.1;Parent=gene-C9F04_RS06570;Dbxref=Genbank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F04_RS06570;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	1342	3291	.	+	.	ID=gene-C9F04_RS06575;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9F04_RS06575;old_locus_tag=C9F04_06785
NZ_PYKF01000245.1	Protein Homology	CDS	1342	3291	.	+	0	ID=cds-WP_001235863.1;Parent=gene-C9F04_RS06575;Dbxref=Genbank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9F04_RS06575;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	3321	4664	.	-	.	ID=gene-C9F04_RS06580;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9F04_RS06580;old_locus_tag=C9F04_06790
NZ_PYKF01000245.1	Protein Homology	CDS	3321	4664	.	-	0	ID=cds-WP_146712431.1;Parent=gene-C9F04_RS06580;Dbxref=Genbank:WP_146712431.1;Name=WP_146712431.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9F04_RS06580;product=NADP-specific glutamate dehydrogenase;protein_id=WP_146712431.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	4903	5178	.	+	.	ID=gene-C9F04_RS06585;Name=C9F04_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06585;old_locus_tag=C9F04_06795
NZ_PYKF01000245.1	Protein Homology	CDS	4903	5178	.	+	0	ID=cds-WP_146712432.1;Parent=gene-C9F04_RS06585;Dbxref=Genbank:WP_146712432.1;Name=WP_146712432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=C9F04_RS06585;product=YnjH family protein;protein_id=WP_146712432.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	5138	5554	.	-	.	ID=gene-C9F04_RS06590;Name=C9F04_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06590;old_locus_tag=C9F04_06800
NZ_PYKF01000245.1	Protein Homology	CDS	5138	5554	.	-	0	ID=cds-WP_000592135.1;Parent=gene-C9F04_RS06590;Dbxref=Genbank:WP_000592135.1;Name=WP_000592135.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9F04_RS06590;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592135.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	5627	6433	.	-	.	ID=gene-C9F04_RS06595;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9F04_RS06595;old_locus_tag=C9F04_06805
NZ_PYKF01000245.1	Protein Homology	CDS	5627	6433	.	-	0	ID=cds-WP_000673954.1;Parent=gene-C9F04_RS06595;Dbxref=Genbank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9F04_RS06595;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11
NZ_PYKF01000245.1	RefSeq	gene	6879	7125	.	+	.	ID=gene-C9F04_RS06600;Name=C9F04_RS06600;end_range=7125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06600;old_locus_tag=C9F04_06815;partial=true
NZ_PYKF01000245.1	Protein Homology	CDS	6879	7125	.	+	0	ID=cds-WP_146712433.1;Parent=gene-C9F04_RS06600;Dbxref=Genbank:WP_146712433.1;Name=WP_146712433.1;Ontology_term=GO:0008483,GO:0030170;end_range=7125,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9F04_RS06600;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_146712433.1;transl_table=11
##sequence-region NZ_PYKF01000186.1 1 7069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000186.1	RefSeq	region	1	7069	.	+	.	ID=NZ_PYKF01000186.1:1..7069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000186.1	RefSeq	gene	1	999	.	+	.	ID=gene-C9F04_RS04220;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9F04_RS04220;old_locus_tag=C9F04_04360;partial=true;start_range=.,1
NZ_PYKF01000186.1	Protein Homology	CDS	1	999	.	+	0	ID=cds-WP_146712325.1;Parent=gene-C9F04_RS04220;Dbxref=Genbank:WP_146712325.1;Name=WP_146712325.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9F04_RS04220;partial=true;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_146712325.1;start_range=.,1;transl_table=11
NZ_PYKF01000186.1	RefSeq	gene	1020	3068	.	+	.	ID=gene-C9F04_RS04225;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9F04_RS04225;old_locus_tag=C9F04_04365
NZ_PYKF01000186.1	Protein Homology	CDS	1020	3068	.	+	0	ID=cds-WP_000088026.1;Parent=gene-C9F04_RS04225;Dbxref=Genbank:WP_000088026.1;Name=WP_000088026.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F04_RS04225;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088026.1;transl_table=11
NZ_PYKF01000186.1	RefSeq	gene	3077	3661	.	+	.	ID=gene-C9F04_RS04230;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9F04_RS04230;old_locus_tag=C9F04_04370
NZ_PYKF01000186.1	Protein Homology	CDS	3077	3661	.	+	0	ID=cds-WP_000579804.1;Parent=gene-C9F04_RS04230;Dbxref=Genbank:WP_000579804.1;Name=WP_000579804.1;Ontology_term=GO:0006813,GO:0008556,GO:0016021;gbkey=CDS;gene=kdpC;go_component=integral component of membrane|0016021||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9F04_RS04230;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_000579804.1;transl_table=11
NZ_PYKF01000186.1	RefSeq	gene	3658	6342	.	+	.	ID=gene-C9F04_RS04235;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9F04_RS04235;old_locus_tag=C9F04_04375
NZ_PYKF01000186.1	Protein Homology	CDS	3658	6342	.	+	0	ID=cds-WP_146712326.1;Parent=gene-C9F04_RS04235;Dbxref=Genbank:WP_146712326.1;Name=WP_146712326.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9F04_RS04235;product=two-component system sensor histidine kinase KdpD;protein_id=WP_146712326.1;transl_table=11
NZ_PYKF01000186.1	RefSeq	pseudogene	6339	6998	.	+	.	ID=gene-C9F04_RS04240;Name=kdpE;end_range=6998,.;gbkey=Gene;gene=kdpE;gene_biotype=pseudogene;locus_tag=C9F04_RS04240;old_locus_tag=C9F04_04380;partial=true;pseudo=true
NZ_PYKF01000186.1	Protein Homology	CDS	6339	6998	.	+	0	ID=cds-C9F04_RS04240;Parent=gene-C9F04_RS04240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=6998,.;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9F04_RS04240;partial=true;product=two-component system response regulator KdpE;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000547.1 1 7052
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000547.1	RefSeq	region	1	7052	.	+	.	ID=NZ_PYKF01000547.1:1..7052;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000547.1	RefSeq	gene	1	904	.	+	.	ID=gene-C9F04_RS16300;Name=C9F04_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16300;old_locus_tag=C9F04_16800;partial=true;start_range=.,1
NZ_PYKF01000547.1	Protein Homology	CDS	1	904	.	+	1	ID=cds-WP_146712882.1;Parent=gene-C9F04_RS16300;Dbxref=Genbank:WP_146712882.1;Name=WP_146712882.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077066.1;locus_tag=C9F04_RS16300;partial=true;product=flagellin;protein_id=WP_146712882.1;start_range=.,1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	983	2188	.	+	.	ID=gene-C9F04_RS16305;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9F04_RS16305;old_locus_tag=C9F04_16805
NZ_PYKF01000547.1	Protein Homology	CDS	983	2188	.	+	0	ID=cds-WP_135369690.1;Parent=gene-C9F04_RS16305;Dbxref=Genbank:WP_135369690.1;Name=WP_135369690.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9F04_RS16305;product=flagellin lysine-N-methylase;protein_id=WP_135369690.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	2385	3104	.	+	.	ID=gene-C9F04_RS16310;Name=C9F04_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16310;old_locus_tag=C9F04_16810
NZ_PYKF01000547.1	Protein Homology	CDS	2385	3104	.	+	0	ID=cds-WP_001087453.1;Parent=gene-C9F04_RS16310;Dbxref=Genbank:WP_001087453.1;Name=WP_001087453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9F04_RS16310;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	3163	3714	.	+	.	ID=gene-C9F04_RS16315;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9F04_RS16315;old_locus_tag=C9F04_16815
NZ_PYKF01000547.1	Protein Homology	CDS	3163	3714	.	+	0	ID=cds-WP_000218080.1;Parent=gene-C9F04_RS16315;Dbxref=Genbank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9F04_RS16315;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	3861	4661	.	+	.	ID=gene-C9F04_RS16320;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9F04_RS16320;old_locus_tag=C9F04_16820
NZ_PYKF01000547.1	Protein Homology	CDS	3861	4661	.	+	0	ID=cds-WP_146712883.1;Parent=gene-C9F04_RS16320;Dbxref=Genbank:WP_146712883.1;Name=WP_146712883.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9F04_RS16320;product=cystine ABC transporter substrate-binding protein;protein_id=WP_146712883.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	4815	5801	.	+	.	ID=gene-C9F04_RS16325;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=C9F04_RS16325;old_locus_tag=C9F04_16825
NZ_PYKF01000547.1	Protein Homology	CDS	4815	5801	.	+	0	ID=cds-WP_146712884.1;Parent=gene-C9F04_RS16325;Dbxref=Genbank:WP_146712884.1;Name=WP_146712884.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9F04_RS16325;product=D-cysteine desulfhydrase;protein_id=WP_146712884.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	5822	6490	.	+	.	ID=gene-C9F04_RS16330;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9F04_RS16330;old_locus_tag=C9F04_16830
NZ_PYKF01000547.1	Protein Homology	CDS	5822	6490	.	+	0	ID=cds-WP_001158238.1;Parent=gene-C9F04_RS16330;Dbxref=Genbank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9F04_RS16330;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11
NZ_PYKF01000547.1	RefSeq	gene	6487	7052	.	+	.	ID=gene-C9F04_RS16335;Name=C9F04_RS16335;end_range=7052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16335;old_locus_tag=C9F04_16835;partial=true
NZ_PYKF01000547.1	Protein Homology	CDS	6487	7052	.	+	0	ID=cds-WP_146712885.1;Parent=gene-C9F04_RS16335;Dbxref=Genbank:WP_146712885.1;Name=WP_146712885.1;Ontology_term=GO:0005524;end_range=7052,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9F04_RS16335;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146712885.1;transl_table=11
##sequence-region NZ_PYKF01000613.1 1 7045
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000613.1	RefSeq	region	1	7045	.	+	.	ID=NZ_PYKF01000613.1:1..7045;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000613.1	RefSeq	gene	1	169	.	+	.	ID=gene-C9F04_RS18420;Name=C9F04_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18420;partial=true;start_range=.,1
NZ_PYKF01000613.1	Protein Homology	CDS	1	169	.	+	1	ID=cds-WP_186799055.1;Parent=gene-C9F04_RS18420;Dbxref=Genbank:WP_186799055.1;Name=WP_186799055.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444790.1;locus_tag=C9F04_RS18420;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_186799055.1;start_range=.,1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	288	986	.	+	.	ID=gene-C9F04_RS18425;Name=C9F04_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18425;old_locus_tag=C9F04_19025
NZ_PYKF01000613.1	Protein Homology	CDS	288	986	.	+	0	ID=cds-WP_001005988.1;Parent=gene-C9F04_RS18425;Dbxref=Genbank:WP_001005988.1;Name=WP_001005988.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9F04_RS18425;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005988.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	1366	2445	.	+	.	ID=gene-C9F04_RS18430;Name=C9F04_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18430;old_locus_tag=C9F04_19030
NZ_PYKF01000613.1	Protein Homology	CDS	1366	2445	.	+	0	ID=cds-WP_146712994.1;Parent=gene-C9F04_RS18430;Dbxref=Genbank:WP_146712994.1;Name=WP_146712994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9F04_RS18430;product=iron ABC transporter permease;protein_id=WP_146712994.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	2445	3221	.	+	.	ID=gene-C9F04_RS18435;Name=C9F04_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18435;old_locus_tag=C9F04_19035
NZ_PYKF01000613.1	Protein Homology	CDS	2445	3221	.	+	0	ID=cds-WP_001214709.1;Parent=gene-C9F04_RS18435;Dbxref=Genbank:WP_001214709.1;Name=WP_001214709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9F04_RS18435;product=ABC transporter ATP-binding protein;protein_id=WP_001214709.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	3312	4064	.	-	.	ID=gene-C9F04_RS18440;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9F04_RS18440;old_locus_tag=C9F04_19040
NZ_PYKF01000613.1	Protein Homology	CDS	3312	4064	.	-	0	ID=cds-WP_146712995.1;Parent=gene-C9F04_RS18440;Dbxref=Genbank:WP_146712995.1;Name=WP_146712995.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9F04_RS18440;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_146712995.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	4288	5328	.	-	.	ID=gene-C9F04_RS18445;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9F04_RS18445;old_locus_tag=C9F04_19050
NZ_PYKF01000613.1	Protein Homology	CDS	4288	5328	.	-	0	ID=cds-WP_135369195.1;Parent=gene-C9F04_RS18445;Dbxref=Genbank:WP_135369195.1;Name=WP_135369195.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9F04_RS18445;product=galactose-1-epimerase;protein_id=WP_135369195.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	5322	6470	.	-	.	ID=gene-C9F04_RS18450;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9F04_RS18450;old_locus_tag=C9F04_19055
NZ_PYKF01000613.1	Protein Homology	CDS	5322	6470	.	-	0	ID=cds-WP_023221278.1;Parent=gene-C9F04_RS18450;Dbxref=Genbank:WP_023221278.1;Name=WP_023221278.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9F04_RS18450;product=galactokinase;protein_id=WP_023221278.1;transl_table=11
NZ_PYKF01000613.1	RefSeq	gene	6473	7045	.	-	.	ID=gene-C9F04_RS18455;Name=galT;end_range=7045,.;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9F04_RS18455;old_locus_tag=C9F04_19060;partial=true
NZ_PYKF01000613.1	Protein Homology	CDS	6473	7045	.	-	0	ID=cds-WP_146712996.1;Parent=gene-C9F04_RS18455;Dbxref=Genbank:WP_146712996.1;Name=WP_146712996.1;Ontology_term=GO:0006012,GO:0008108;end_range=7045,.;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9F04_RS18455;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_146712996.1;transl_table=11
##sequence-region NZ_PYKF01000697.1 1 20611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000697.1	RefSeq	region	1	20611	.	+	.	ID=NZ_PYKF01000697.1:1..20611;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000697.1	RefSeq	gene	1	405	.	-	.	ID=gene-C9F04_RS21610;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=C9F04_RS21610;old_locus_tag=C9F04_22320;partial=true;start_range=.,1
NZ_PYKF01000697.1	Protein Homology	CDS	1	405	.	-	0	ID=cds-WP_146713150.1;Parent=gene-C9F04_RS21610;Dbxref=Genbank:WP_146713150.1;Name=WP_146713150.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=C9F04_RS21610;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_146713150.1;start_range=.,1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	763	3462	.	+	.	ID=gene-C9F04_RS21615;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=C9F04_RS21615;old_locus_tag=C9F04_22325
NZ_PYKF01000697.1	Protein Homology	CDS	763	3462	.	+	0	ID=cds-WP_135369067.1;Parent=gene-C9F04_RS21615;Dbxref=Genbank:WP_135369067.1;Name=WP_135369067.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=C9F04_RS21615;product=CRISPR-associated helicase Cas3';protein_id=WP_135369067.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	3846	4799	.	+	.	ID=gene-C9F04_RS21620;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9F04_RS21620;old_locus_tag=C9F04_22330
NZ_PYKF01000697.1	Protein Homology	CDS	3846	4799	.	+	0	ID=cds-WP_001145544.1;Parent=gene-C9F04_RS21620;Dbxref=Genbank:WP_001145544.1;Name=WP_001145544.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9F04_RS21620;product=SPI-1 type III secretion system effector SopD;protein_id=WP_001145544.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	5012	5746	.	-	.	ID=gene-C9F04_RS21625;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9F04_RS21625;old_locus_tag=C9F04_22340
NZ_PYKF01000697.1	Protein Homology	CDS	5012	5746	.	-	0	ID=cds-WP_023201015.1;Parent=gene-C9F04_RS21625;Dbxref=Genbank:WP_023201015.1;Name=WP_023201015.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9F04_RS21625;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023201015.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	5848	7560	.	-	.	ID=gene-C9F04_RS21630;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9F04_RS21630;old_locus_tag=C9F04_22345
NZ_PYKF01000697.1	Protein Homology	CDS	5848	7560	.	-	0	ID=cds-WP_146713151.1;Parent=gene-C9F04_RS21630;Dbxref=Genbank:WP_146713151.1;Name=WP_146713151.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9F04_RS21630;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_146713151.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	7560	9359	.	-	.	ID=gene-C9F04_RS21635;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F04_RS21635;old_locus_tag=C9F04_22350
NZ_PYKF01000697.1	Protein Homology	CDS	7560	9359	.	-	0	ID=cds-WP_077463812.1;Parent=gene-C9F04_RS21635;Dbxref=Genbank:WP_077463812.1;Name=WP_077463812.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9F04_RS21635;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_077463812.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	9783	10145	.	+	.	ID=gene-C9F04_RS21640;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9F04_RS21640;old_locus_tag=C9F04_22360
NZ_PYKF01000697.1	Protein Homology	CDS	9783	10145	.	+	0	ID=cds-WP_000108313.1;Parent=gene-C9F04_RS21640;Dbxref=Genbank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9F04_RS21640;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	10232	11029	.	-	.	ID=gene-C9F04_RS21645;Name=C9F04_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21645;old_locus_tag=C9F04_22365
NZ_PYKF01000697.1	Protein Homology	CDS	10232	11029	.	-	0	ID=cds-WP_135369069.1;Parent=gene-C9F04_RS21645;Dbxref=Genbank:WP_135369069.1;Name=WP_135369069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9F04_RS21645;product=MBL fold metallo-hydrolase;protein_id=WP_135369069.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	direct_repeat	11127	11826	.	+	.	ID=id-NZ_PYKF01000697.1:11127..11826;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=11188..11216;rpt_unit_seq=cggtttatccccgctggcgcggggaacac
NZ_PYKF01000697.1	RefSeq	gene	12123	12794	.	-	.	ID=gene-C9F04_RS21650;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9F04_RS21650;old_locus_tag=C9F04_22370
NZ_PYKF01000697.1	Protein Homology	CDS	12123	12794	.	-	0	ID=cds-WP_001199961.1;Parent=gene-C9F04_RS21650;Dbxref=Genbank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9F04_RS21650;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	12930	14228	.	-	.	ID=gene-C9F04_RS21655;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9F04_RS21655;old_locus_tag=C9F04_22375
NZ_PYKF01000697.1	Protein Homology	CDS	12930	14228	.	-	0	ID=cds-WP_146713152.1;Parent=gene-C9F04_RS21655;Dbxref=Genbank:WP_146713152.1;Name=WP_146713152.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9F04_RS21655;product=phosphopyruvate hydratase;protein_id=WP_146713152.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	14311	15948	.	-	.	ID=gene-C9F04_RS21660;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9F04_RS21660;old_locus_tag=C9F04_22380
NZ_PYKF01000697.1	Protein Homology	CDS	14311	15948	.	-	0	ID=cds-WP_146713153.1;Parent=gene-C9F04_RS21660;Dbxref=Genbank:WP_146713153.1;Name=WP_146713153.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F04_RS21660;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_146713153.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	16176	16976	.	-	.	ID=gene-C9F04_RS21665;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9F04_RS21665;old_locus_tag=C9F04_22385
NZ_PYKF01000697.1	Protein Homology	CDS	16176	16976	.	-	0	ID=cds-WP_146713154.1;Parent=gene-C9F04_RS21665;Dbxref=Genbank:WP_146713154.1;Name=WP_146713154.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9F04_RS21665;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_146713154.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	17583	18170	.	+	.	ID=gene-C9F04_RS21670;Name=C9F04_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21670;old_locus_tag=C9F04_22390
NZ_PYKF01000697.1	Protein Homology	CDS	17583	18170	.	+	0	ID=cds-WP_000842512.1;Parent=gene-C9F04_RS21670;Dbxref=Genbank:WP_000842512.1;Name=WP_000842512.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9F04_RS21670;product=fimbrial protein;protein_id=WP_000842512.1;transl_table=11
NZ_PYKF01000697.1	RefSeq	gene	18304	20611	.	+	.	ID=gene-C9F04_RS21675;Name=C9F04_RS21675;end_range=20611,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21675;old_locus_tag=C9F04_22395;partial=true
NZ_PYKF01000697.1	Protein Homology	CDS	18304	20611	.	+	0	ID=cds-WP_261771446.1;Parent=gene-C9F04_RS21675;Dbxref=Genbank:WP_261771446.1;Name=WP_261771446.1;end_range=20611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=C9F04_RS21675;partial=true;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_261771446.1;transl_table=11
##sequence-region NZ_PYKF01000226.1 1 7021
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000226.1	RefSeq	region	1	7021	.	+	.	ID=NZ_PYKF01000226.1:1..7021;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000226.1	RefSeq	gene	1	2575	.	+	.	ID=gene-C9F04_RS05855;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9F04_RS05855;old_locus_tag=C9F04_06040;partial=true;start_range=.,1
NZ_PYKF01000226.1	Protein Homology	CDS	1	2575	.	+	1	ID=cds-WP_146712403.1;Parent=gene-C9F04_RS05855;Dbxref=Genbank:WP_146712403.1;Name=WP_146712403.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228854.1;locus_tag=C9F04_RS05855;partial=true;product=transcription-repair coupling factor;protein_id=WP_146712403.1;start_range=.,1;transl_table=11
NZ_PYKF01000226.1	RefSeq	gene	2723	3688	.	+	.	ID=gene-C9F04_RS05860;Name=C9F04_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05860;old_locus_tag=C9F04_06045
NZ_PYKF01000226.1	Protein Homology	CDS	2723	3688	.	+	0	ID=cds-WP_000482961.1;Parent=gene-C9F04_RS05860;Dbxref=Genbank:WP_000482961.1;Name=WP_000482961.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9F04_RS05860;product=L%2CD-transpeptidase family protein;protein_id=WP_000482961.1;transl_table=11
NZ_PYKF01000226.1	RefSeq	gene	3785	4042	.	-	.	ID=gene-C9F04_RS05865;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=C9F04_RS05865;old_locus_tag=C9F04_06050
NZ_PYKF01000226.1	Protein Homology	CDS	3785	4042	.	-	0	ID=cds-WP_146712404.1;Parent=gene-C9F04_RS05865;Dbxref=Genbank:WP_146712404.1;Name=WP_146712404.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9F04_RS05865;product=multiple stress resistance protein BhsA;protein_id=WP_146712404.1;transl_table=11
NZ_PYKF01000226.1	RefSeq	gene	4284	4919	.	+	.	ID=gene-C9F04_RS05870;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=C9F04_RS05870;old_locus_tag=C9F04_06055
NZ_PYKF01000226.1	Protein Homology	CDS	4284	4919	.	+	0	ID=cds-WP_000205986.1;Parent=gene-C9F04_RS05870;Dbxref=Genbank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=C9F04_RS05870;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11
NZ_PYKF01000226.1	RefSeq	gene	4993	5532	.	-	.	ID=gene-C9F04_RS05875;Name=C9F04_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05875;old_locus_tag=C9F04_06060
NZ_PYKF01000226.1	Protein Homology	CDS	4993	5532	.	-	0	ID=cds-WP_001043449.1;Parent=gene-C9F04_RS05875;Dbxref=Genbank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9F04_RS05875;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11
NZ_PYKF01000226.1	RefSeq	gene	5709	7013	.	-	.	ID=gene-C9F04_RS05880;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9F04_RS05880;old_locus_tag=C9F04_06065
NZ_PYKF01000226.1	Protein Homology	CDS	5709	7013	.	-	0	ID=cds-WP_000211053.1;Parent=gene-C9F04_RS05880;Dbxref=Genbank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9F04_RS05880;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11
##sequence-region NZ_PYKF01000672.1 1 6982
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000672.1	RefSeq	region	1	6982	.	+	.	ID=NZ_PYKF01000672.1:1..6982;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000672.1	RefSeq	gene	1	410	.	-	.	ID=gene-C9F04_RS20550;Name=C9F04_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20550;old_locus_tag=C9F04_21220;partial=true;start_range=.,1
NZ_PYKF01000672.1	Protein Homology	CDS	1	410	.	-	0	ID=cds-WP_146713098.1;Parent=gene-C9F04_RS20550;Dbxref=Genbank:WP_146713098.1;Name=WP_146713098.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9F04_RS20550;partial=true;product=HAD-IIB family hydrolase;protein_id=WP_146713098.1;start_range=.,1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	720	947	.	-	.	ID=gene-C9F04_RS20555;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9F04_RS20555;old_locus_tag=C9F04_21225
NZ_PYKF01000672.1	Protein Homology	CDS	720	947	.	-	0	ID=cds-WP_000844798.1;Parent=gene-C9F04_RS20555;Dbxref=Genbank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9F04_RS20555;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	1076	1270	.	+	.	ID=gene-C9F04_RS20560;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9F04_RS20560;old_locus_tag=C9F04_21230
NZ_PYKF01000672.1	Protein Homology	CDS	1076	1270	.	+	0	ID=cds-WP_000867218.1;Parent=gene-C9F04_RS20560;Dbxref=Genbank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9F04_RS20560;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	1309	1932	.	-	.	ID=gene-C9F04_RS20565;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9F04_RS20565;old_locus_tag=C9F04_21235
NZ_PYKF01000672.1	Protein Homology	CDS	1309	1932	.	-	0	ID=cds-WP_000103971.1;Parent=gene-C9F04_RS20565;Dbxref=Genbank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9F04_RS20565;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	2214	3008	.	-	.	ID=gene-C9F04_RS20570;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9F04_RS20570;old_locus_tag=C9F04_21240
NZ_PYKF01000672.1	Protein Homology	CDS	2214	3008	.	-	0	ID=cds-WP_000616953.1;Parent=gene-C9F04_RS20570;Dbxref=Genbank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9F04_RS20570;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	3017	3286	.	-	.	ID=gene-C9F04_RS20575;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9F04_RS20575;old_locus_tag=C9F04_21245
NZ_PYKF01000672.1	Protein Homology	CDS	3017	3286	.	-	0	ID=cds-WP_000187355.1;Parent=gene-C9F04_RS20575;Dbxref=Genbank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9F04_RS20575;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	3296	4033	.	-	.	ID=gene-C9F04_RS20580;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9F04_RS20580;old_locus_tag=C9F04_21250
NZ_PYKF01000672.1	Protein Homology	CDS	3296	4033	.	-	0	ID=cds-WP_001253414.1;Parent=gene-C9F04_RS20580;Dbxref=Genbank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9F04_RS20580;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	4033	4410	.	-	.	ID=gene-C9F04_RS20585;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9F04_RS20585;old_locus_tag=C9F04_21255
NZ_PYKF01000672.1	Protein Homology	CDS	4033	4410	.	-	0	ID=cds-WP_146713099.1;Parent=gene-C9F04_RS20585;Dbxref=Genbank:WP_146713099.1;Name=WP_146713099.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9F04_RS20585;product=flagellar biosynthetic protein FliO;protein_id=WP_146713099.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	4410	4823	.	-	.	ID=gene-C9F04_RS20590;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9F04_RS20590;old_locus_tag=C9F04_21260
NZ_PYKF01000672.1	Protein Homology	CDS	4410	4823	.	-	0	ID=cds-WP_001282115.1;Parent=gene-C9F04_RS20590;Dbxref=Genbank:WP_001282115.1;Name=WP_001282115.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9F04_RS20590;product=flagellar motor switch protein FliN;protein_id=WP_001282115.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	4820	5824	.	-	.	ID=gene-C9F04_RS20595;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9F04_RS20595;old_locus_tag=C9F04_21265
NZ_PYKF01000672.1	Protein Homology	CDS	4820	5824	.	-	0	ID=cds-WP_146713100.1;Parent=gene-C9F04_RS20595;Dbxref=Genbank:WP_146713100.1;Name=WP_146713100.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9F04_RS20595;product=flagellar motor switch protein FliM;protein_id=WP_146713100.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	5829	6296	.	-	.	ID=gene-C9F04_RS20600;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9F04_RS20600;old_locus_tag=C9F04_21270
NZ_PYKF01000672.1	Protein Homology	CDS	5829	6296	.	-	0	ID=cds-WP_000132169.1;Parent=gene-C9F04_RS20600;Dbxref=Genbank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9F04_RS20600;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11
NZ_PYKF01000672.1	RefSeq	gene	6401	6982	.	-	.	ID=gene-C9F04_RS20605;Name=C9F04_RS20605;end_range=6982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20605;old_locus_tag=C9F04_21275;partial=true
NZ_PYKF01000672.1	Protein Homology	CDS	6401	6982	.	-	0	ID=cds-WP_186799066.1;Parent=gene-C9F04_RS20605;Dbxref=Genbank:WP_186799066.1;Name=WP_186799066.1;end_range=6982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9F04_RS20605;partial=true;product=flagellar hook-length control protein FliK;protein_id=WP_186799066.1;transl_table=11
##sequence-region NZ_PYKF01000836.1 1 6954
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000836.1	RefSeq	region	1	6954	.	+	.	ID=NZ_PYKF01000836.1:1..6954;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000836.1	RefSeq	gene	1	302	.	-	.	ID=gene-C9F04_RS26290;Name=C9F04_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26290;old_locus_tag=C9F04_27205;partial=true;start_range=.,1
NZ_PYKF01000836.1	Protein Homology	CDS	1	302	.	-	0	ID=cds-WP_146713384.1;Parent=gene-C9F04_RS26290;Dbxref=Genbank:WP_146713384.1;Name=WP_146713384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9F04_RS26290;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_146713384.1;start_range=.,1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	390	1238	.	+	.	ID=gene-C9F04_RS26295;Name=C9F04_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26295;old_locus_tag=C9F04_27210
NZ_PYKF01000836.1	Protein Homology	CDS	390	1238	.	+	0	ID=cds-WP_000560620.1;Parent=gene-C9F04_RS26295;Dbxref=Genbank:WP_000560620.1;Name=WP_000560620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9F04_RS26295;product=SDR family oxidoreductase;protein_id=WP_000560620.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	1319	2284	.	+	.	ID=gene-C9F04_RS26300;Name=C9F04_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26300;old_locus_tag=C9F04_27215
NZ_PYKF01000836.1	Protein Homology	CDS	1319	2284	.	+	0	ID=cds-WP_135369330.1;Parent=gene-C9F04_RS26300;Dbxref=Genbank:WP_135369330.1;Name=WP_135369330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9F04_RS26300;product=DMT family transporter;protein_id=WP_135369330.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	2387	3049	.	+	.	ID=gene-C9F04_RS26305;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9F04_RS26305;old_locus_tag=C9F04_27220
NZ_PYKF01000836.1	Protein Homology	CDS	2387	3049	.	+	0	ID=cds-WP_000331471.1;Parent=gene-C9F04_RS26305;Dbxref=Genbank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9F04_RS26305;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	3161	4570	.	-	.	ID=gene-C9F04_RS26310;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=C9F04_RS26310;old_locus_tag=C9F04_27225
NZ_PYKF01000836.1	Protein Homology	CDS	3161	4570	.	-	0	ID=cds-WP_146713385.1;Parent=gene-C9F04_RS26310;Dbxref=Genbank:WP_146713385.1;Name=WP_146713385.1;Ontology_term=GO:0006865,GO:0055085,GO:0016021;gbkey=CDS;gene=cycA;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F04_RS26310;product=D-serine/D-alanine/glycine transporter;protein_id=WP_146713385.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	4866	5486	.	-	.	ID=gene-C9F04_RS26315;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9F04_RS26315;old_locus_tag=C9F04_27230
NZ_PYKF01000836.1	Protein Homology	CDS	4866	5486	.	-	0	ID=cds-WP_000235161.1;Parent=gene-C9F04_RS26315;Dbxref=Genbank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9F04_RS26315;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	5706	6341	.	+	.	ID=gene-C9F04_RS26320;Name=C9F04_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26320;old_locus_tag=C9F04_27240
NZ_PYKF01000836.1	Protein Homology	CDS	5706	6341	.	+	0	ID=cds-WP_001119446.1;Parent=gene-C9F04_RS26320;Dbxref=Genbank:WP_001119446.1;Name=WP_001119446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9F04_RS26320;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11
NZ_PYKF01000836.1	RefSeq	gene	6391	6954	.	-	.	ID=gene-C9F04_RS26325;Name=C9F04_RS26325;end_range=6954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26325;old_locus_tag=C9F04_27245;partial=true
NZ_PYKF01000836.1	Protein Homology	CDS	6391	6954	.	-	0	ID=cds-WP_146713386.1;Parent=gene-C9F04_RS26325;Dbxref=Genbank:WP_146713386.1;Name=WP_146713386.1;end_range=6954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9F04_RS26325;partial=true;product=DMT family transporter;protein_id=WP_146713386.1;transl_table=11
##sequence-region NZ_PYKF01000213.1 1 6934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000213.1	RefSeq	region	1	6934	.	+	.	ID=NZ_PYKF01000213.1:1..6934;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000213.1	RefSeq	gene	72	455	.	-	.	ID=gene-C9F04_RS05300;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9F04_RS05300;old_locus_tag=C9F04_05475
NZ_PYKF01000213.1	Protein Homology	CDS	72	455	.	-	0	ID=cds-WP_000939753.1;Parent=gene-C9F04_RS05300;Dbxref=Genbank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016021;gbkey=CDS;gene=crcB;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9F04_RS05300;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	546	1334	.	+	.	ID=gene-C9F04_RS05305;Name=C9F04_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05305;old_locus_tag=C9F04_05480
NZ_PYKF01000213.1	Protein Homology	CDS	546	1334	.	+	0	ID=cds-WP_000495776.1;Parent=gene-C9F04_RS05305;Dbxref=Genbank:WP_000495776.1;Name=WP_000495776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9F04_RS05305;product=deaminated glutathione amidase;protein_id=WP_000495776.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	1463	1666	.	+	.	ID=gene-C9F04_RS05310;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9F04_RS05310;old_locus_tag=C9F04_05485
NZ_PYKF01000213.1	Protein Homology	CDS	1463	1666	.	+	0	ID=cds-WP_000503938.1;Parent=gene-C9F04_RS05310;Dbxref=Genbank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9F04_RS05310;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	1752	2717	.	-	.	ID=gene-C9F04_RS05315;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9F04_RS05315;old_locus_tag=C9F04_05490
NZ_PYKF01000213.1	Protein Homology	CDS	1752	2717	.	-	0	ID=cds-WP_000042640.1;Parent=gene-C9F04_RS05315;Dbxref=Genbank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9F04_RS05315;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	2923	3876	.	-	.	ID=gene-C9F04_RS05320;Name=C9F04_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05320;old_locus_tag=C9F04_05495
NZ_PYKF01000213.1	Protein Homology	CDS	2923	3876	.	-	0	ID=cds-WP_001282817.1;Parent=gene-C9F04_RS05320;Dbxref=Genbank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9F04_RS05320;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	4178	4819	.	-	.	ID=gene-C9F04_RS05325;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9F04_RS05325;old_locus_tag=C9F04_05500
NZ_PYKF01000213.1	Protein Homology	CDS	4178	4819	.	-	0	ID=cds-WP_000284009.1;Parent=gene-C9F04_RS05325;Dbxref=Genbank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9F04_RS05325;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	4919	5182	.	-	.	ID=gene-C9F04_RS05330;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9F04_RS05330;old_locus_tag=C9F04_05505
NZ_PYKF01000213.1	Protein Homology	CDS	4919	5182	.	-	0	ID=cds-WP_000850547.1;Parent=gene-C9F04_RS05330;Dbxref=Genbank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9F04_RS05330;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	5291	6502	.	-	.	ID=gene-C9F04_RS05335;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9F04_RS05335;old_locus_tag=C9F04_05510
NZ_PYKF01000213.1	Protein Homology	CDS	5291	6502	.	-	0	ID=cds-WP_000858711.1;Parent=gene-C9F04_RS05335;Dbxref=Genbank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9F04_RS05335;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11
NZ_PYKF01000213.1	RefSeq	gene	6642	6934	.	-	.	ID=gene-C9F04_RS05340;Name=C9F04_RS05340;end_range=6934,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05340;old_locus_tag=C9F04_05515;partial=true
NZ_PYKF01000213.1	Protein Homology	CDS	6642	6934	.	-	2	ID=cds-WP_146712384.1;Parent=gene-C9F04_RS05340;Dbxref=Genbank:WP_146712384.1;Name=WP_146712384.1;Ontology_term=GO:0042834;end_range=6934,.;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F04_RS05340;partial=true;product=SPOR domain-containing protein;protein_id=WP_146712384.1;transl_table=11
##sequence-region NZ_PYKF01000477.1 1 6928
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000477.1	RefSeq	region	1	6928	.	+	.	ID=NZ_PYKF01000477.1:1..6928;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000477.1	RefSeq	pseudogene	1	462	.	-	.	ID=gene-C9F04_RS14365;Name=C9F04_RS14365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14365;old_locus_tag=C9F04_14835;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000477.1	Protein Homology	CDS	1	462	.	-	0	ID=cds-C9F04_RS14365;Parent=gene-C9F04_RS14365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9F04_RS14365;partial=true;product=isochorismate synthase MenF;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000477.1	RefSeq	gene	563	868	.	-	.	ID=gene-C9F04_RS14370;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9F04_RS14370;old_locus_tag=C9F04_14840
NZ_PYKF01000477.1	Protein Homology	CDS	563	868	.	-	0	ID=cds-WP_001519663.1;Parent=gene-C9F04_RS14370;Dbxref=Genbank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9F04_RS14370;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11
NZ_PYKF01000477.1	RefSeq	gene	923	1384	.	-	.	ID=gene-C9F04_RS14375;Name=C9F04_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14375;old_locus_tag=C9F04_14845
NZ_PYKF01000477.1	Protein Homology	CDS	923	1384	.	-	0	ID=cds-WP_000568155.1;Parent=gene-C9F04_RS14375;Dbxref=Genbank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9F04_RS14375;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11
NZ_PYKF01000477.1	RefSeq	gene	1445	2362	.	+	.	ID=gene-C9F04_RS14380;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9F04_RS14380;old_locus_tag=C9F04_14850
NZ_PYKF01000477.1	Protein Homology	CDS	1445	2362	.	+	0	ID=cds-WP_000419093.1;Parent=gene-C9F04_RS14380;Dbxref=Genbank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9F04_RS14380;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11
NZ_PYKF01000477.1	RefSeq	gene	2428	3429	.	+	.	ID=gene-C9F04_RS14385;Name=C9F04_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14385;old_locus_tag=C9F04_14855
NZ_PYKF01000477.1	Protein Homology	CDS	2428	3429	.	+	0	ID=cds-WP_000368560.1;Parent=gene-C9F04_RS14385;Dbxref=Genbank:WP_000368560.1;Name=WP_000368560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9F04_RS14385;product=chemotaxis protein;protein_id=WP_000368560.1;transl_table=11
NZ_PYKF01000477.1	RefSeq	gene	3470	5251	.	-	.	ID=gene-C9F04_RS14390;Name=C9F04_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14390;old_locus_tag=C9F04_14860
NZ_PYKF01000477.1	Protein Homology	CDS	3470	5251	.	-	0	ID=cds-WP_135369260.1;Parent=gene-C9F04_RS14390;Dbxref=Genbank:WP_135369260.1;Name=WP_135369260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9F04_RS14390;product=VWA domain-containing protein;protein_id=WP_135369260.1;transl_table=11
NZ_PYKF01000477.1	RefSeq	pseudogene	5970	6928	.	-	.	ID=gene-C9F04_RS14395;Name=C9F04_RS14395;end_range=6928,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14395;old_locus_tag=C9F04_14865;partial=true;pseudo=true
NZ_PYKF01000477.1	Protein Homology	CDS	5970	6928	.	-	2	ID=cds-C9F04_RS14395;Parent=gene-C9F04_RS14395;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0046819,GO:0015474,GO:0045203;end_range=6928,.;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082402.1;locus_tag=C9F04_RS14395;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000325.1 1 6904
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000325.1	RefSeq	region	1	6904	.	+	.	ID=NZ_PYKF01000325.1:1..6904;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000325.1	RefSeq	gene	1	200	.	+	.	ID=gene-C9F04_RS09465;Name=C9F04_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09465;old_locus_tag=C9F04_09770;partial=true;start_range=.,1
NZ_PYKF01000325.1	Protein Homology	CDS	1	200	.	+	2	ID=cds-WP_261770769.1;Parent=gene-C9F04_RS09465;Dbxref=Genbank:WP_261770769.1;Name=WP_261770769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9F04_RS09465;partial=true;product=hypothetical protein;protein_id=WP_261770769.1;start_range=.,1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	409	894	.	+	.	ID=gene-C9F04_RS09470;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9F04_RS09470;old_locus_tag=C9F04_09775
NZ_PYKF01000325.1	Protein Homology	CDS	409	894	.	+	0	ID=cds-WP_001195800.1;Parent=gene-C9F04_RS09470;Dbxref=Genbank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9F04_RS09470;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	994	1545	.	-	.	ID=gene-C9F04_RS09475;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9F04_RS09475;old_locus_tag=C9F04_09780
NZ_PYKF01000325.1	Protein Homology	CDS	994	1545	.	-	0	ID=cds-WP_000730794.1;Parent=gene-C9F04_RS09475;Dbxref=Genbank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9F04_RS09475;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	1711	2643	.	+	.	ID=gene-C9F04_RS09480;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9F04_RS09480;old_locus_tag=C9F04_09785
NZ_PYKF01000325.1	Protein Homology	CDS	1711	2643	.	+	0	ID=cds-WP_001542329.1;Parent=gene-C9F04_RS09480;Dbxref=Genbank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9F04_RS09480;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	2679	3764	.	+	.	ID=gene-C9F04_RS09485;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9F04_RS09485;old_locus_tag=C9F04_09790
NZ_PYKF01000325.1	Protein Homology	CDS	2679	3764	.	+	0	ID=cds-WP_000918457.1;Parent=gene-C9F04_RS09485;Dbxref=Genbank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9F04_RS09485;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	3768	4592	.	+	.	ID=gene-C9F04_RS09490;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9F04_RS09490;old_locus_tag=C9F04_09795
NZ_PYKF01000325.1	Protein Homology	CDS	3768	4592	.	+	0	ID=cds-WP_000750428.1;Parent=gene-C9F04_RS09490;Dbxref=Genbank:WP_000750428.1;Name=WP_000750428.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9F04_RS09490;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750428.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	4592	5401	.	+	.	ID=gene-C9F04_RS09495;Name=C9F04_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09495;old_locus_tag=C9F04_09800
NZ_PYKF01000325.1	Protein Homology	CDS	4592	5401	.	+	0	ID=cds-WP_146712548.1;Parent=gene-C9F04_RS09495;Dbxref=Genbank:WP_146712548.1;Name=WP_146712548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9F04_RS09495;product=sulfite exporter TauE/SafE family protein;protein_id=WP_146712548.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	5401	5949	.	+	.	ID=gene-C9F04_RS09500;Name=C9F04_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09500;old_locus_tag=C9F04_09805
NZ_PYKF01000325.1	Protein Homology	CDS	5401	5949	.	+	0	ID=cds-WP_001066345.1;Parent=gene-C9F04_RS09500;Dbxref=Genbank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9F04_RS09500;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	5982	6257	.	+	.	ID=gene-C9F04_RS09505;Name=C9F04_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09505;old_locus_tag=C9F04_09810
NZ_PYKF01000325.1	Protein Homology	CDS	5982	6257	.	+	0	ID=cds-WP_000559749.1;Parent=gene-C9F04_RS09505;Dbxref=Genbank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9F04_RS09505;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11
NZ_PYKF01000325.1	RefSeq	gene	6309	6904	.	-	.	ID=gene-C9F04_RS09510;Name=mnmC;end_range=6904,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9F04_RS09510;old_locus_tag=C9F04_09815;partial=true
NZ_PYKF01000325.1	Protein Homology	CDS	6309	6904	.	-	2	ID=cds-WP_186799018.1;Parent=gene-C9F04_RS09510;Dbxref=Genbank:WP_186799018.1;Name=WP_186799018.1;Ontology_term=GO:0016645;end_range=6904,.;gbkey=CDS;gene=mnmC;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=C9F04_RS09510;partial=true;product=FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_186799018.1;transl_table=11
##sequence-region NZ_PYKF01000327.1 1 6895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000327.1	RefSeq	region	1	6895	.	+	.	ID=NZ_PYKF01000327.1:1..6895;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000327.1	RefSeq	gene	79	690	.	-	.	ID=gene-C9F04_RS09525;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9F04_RS09525;old_locus_tag=C9F04_09830
NZ_PYKF01000327.1	Protein Homology	CDS	79	690	.	-	0	ID=cds-WP_001272784.1;Parent=gene-C9F04_RS09525;Dbxref=Genbank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9F04_RS09525;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	797	1156	.	+	.	ID=gene-C9F04_RS09530;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9F04_RS09530;old_locus_tag=C9F04_09835
NZ_PYKF01000327.1	Protein Homology	CDS	797	1156	.	+	0	ID=cds-WP_023195111.1;Parent=gene-C9F04_RS09530;Dbxref=Genbank:WP_023195111.1;Name=WP_023195111.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=C9F04_RS09530;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_023195111.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	1254	2075	.	+	.	ID=gene-C9F04_RS09535;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9F04_RS09535;old_locus_tag=C9F04_09840
NZ_PYKF01000327.1	Protein Homology	CDS	1254	2075	.	+	0	ID=cds-WP_001281933.1;Parent=gene-C9F04_RS09535;Dbxref=Genbank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9F04_RS09535;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	2179	3420	.	-	.	ID=gene-C9F04_RS09540;Name=C9F04_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09540;old_locus_tag=C9F04_09845
NZ_PYKF01000327.1	Protein Homology	CDS	2179	3420	.	-	0	ID=cds-WP_000708447.1;Parent=gene-C9F04_RS09540;Dbxref=Genbank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9F04_RS09540;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	3483	4097	.	-	.	ID=gene-C9F04_RS09545;Name=C9F04_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09545;old_locus_tag=C9F04_09850
NZ_PYKF01000327.1	Protein Homology	CDS	3483	4097	.	-	0	ID=cds-WP_001125344.1;Parent=gene-C9F04_RS09545;Dbxref=Genbank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9F04_RS09545;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	4339	5640	.	+	.	ID=gene-C9F04_RS09550;Name=C9F04_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09550;old_locus_tag=C9F04_09860
NZ_PYKF01000327.1	Protein Homology	CDS	4339	5640	.	+	0	ID=cds-WP_000046211.1;Parent=gene-C9F04_RS09550;Dbxref=Genbank:WP_000046211.1;Name=WP_000046211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9F04_RS09550;product=inorganic triphosphatase;protein_id=WP_000046211.1;transl_table=11
NZ_PYKF01000327.1	RefSeq	gene	5758	6895	.	+	.	ID=gene-C9F04_RS09555;Name=glnE;end_range=6895,.;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9F04_RS09555;old_locus_tag=C9F04_09865;partial=true
NZ_PYKF01000327.1	Protein Homology	CDS	5758	6895	.	+	0	ID=cds-WP_261770770.1;Parent=gene-C9F04_RS09555;Dbxref=Genbank:WP_261770770.1;Name=WP_261770770.1;Ontology_term=GO:0008882;end_range=6895,.;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9F04_RS09555;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_261770770.1;transl_table=11
##sequence-region NZ_PYKF01000825.1 1 6888
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000825.1	RefSeq	region	1	6888	.	+	.	ID=NZ_PYKF01000825.1:1..6888;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000825.1	RefSeq	pseudogene	97	4302	.	+	.	ID=gene-C9F04_RS25900;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=pseudogene;locus_tag=C9F04_RS25900;old_locus_tag=C9F04_26795;partial=true;pseudo=true;start_range=.,97
NZ_PYKF01000825.1	Protein Homology	CDS	97	4302	.	+	0	ID=cds-C9F04_RS25900;Parent=gene-C9F04_RS25900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F04_RS25900;partial=true;product=chromosome partition protein MukB;pseudo=true;start_range=.,97;transl_table=11
NZ_PYKF01000825.1	RefSeq	gene	4647	6494	.	+	.	ID=gene-C9F04_RS25905;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9F04_RS25905;old_locus_tag=C9F04_26800
NZ_PYKF01000825.1	Protein Homology	CDS	4647	6494	.	+	0	ID=cds-WP_135369653.1;Parent=gene-C9F04_RS25905;Dbxref=Genbank:WP_135369653.1;Name=WP_135369653.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9F04_RS25905;product=L%2CD-transpeptidase;protein_id=WP_135369653.1;transl_table=11
NZ_PYKF01000825.1	RefSeq	pseudogene	6754	6888	.	+	.	ID=gene-C9F04_RS27290;Name=C9F04_RS27290;end_range=6888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27290;partial=true;pseudo=true
NZ_PYKF01000825.1	Protein Homology	CDS	6754	6888	.	+	0	ID=cds-C9F04_RS27290;Parent=gene-C9F04_RS27290;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F04_RS27290;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000571.1 1 6864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000571.1	RefSeq	region	1	6864	.	+	.	ID=NZ_PYKF01000571.1:1..6864;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000571.1	RefSeq	pseudogene	1	1362	.	+	.	ID=gene-C9F04_RS17005;Name=C9F04_RS17005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17005;old_locus_tag=C9F04_17550;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000571.1	Protein Homology	CDS	1	1362	.	+	0	ID=cds-C9F04_RS17005;Parent=gene-C9F04_RS17005;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378543.1;locus_tag=C9F04_RS17005;partial=true;product=tetrathionate reductase subunit TtrA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000571.1	RefSeq	gene	1685	2911	.	+	.	ID=gene-C9F04_RS17010;Name=C9F04_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17010;old_locus_tag=C9F04_17555
NZ_PYKF01000571.1	Protein Homology	CDS	1685	2911	.	+	0	ID=cds-WP_000471815.1;Parent=gene-C9F04_RS17010;Dbxref=Genbank:WP_000471815.1;Name=WP_000471815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9F04_RS17010;product=PfkB family carbohydrate kinase;protein_id=WP_000471815.1;transl_table=11
NZ_PYKF01000571.1	RefSeq	gene	2923	3660	.	+	.	ID=gene-C9F04_RS17015;Name=C9F04_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17015;old_locus_tag=C9F04_17560
NZ_PYKF01000571.1	Protein Homology	CDS	2923	3660	.	+	0	ID=cds-WP_000697187.1;Parent=gene-C9F04_RS17015;Dbxref=Genbank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9F04_RS17015;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11
NZ_PYKF01000571.1	RefSeq	gene	3719	4612	.	+	.	ID=gene-C9F04_RS17020;Name=C9F04_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17020;old_locus_tag=C9F04_17565
NZ_PYKF01000571.1	Protein Homology	CDS	3719	4612	.	+	0	ID=cds-WP_001000508.1;Parent=gene-C9F04_RS17020;Dbxref=Genbank:WP_001000508.1;Name=WP_001000508.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9F04_RS17020;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000508.1;transl_table=11
NZ_PYKF01000571.1	RefSeq	gene	4634	5977	.	+	.	ID=gene-C9F04_RS17025;Name=C9F04_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17025;old_locus_tag=C9F04_17570
NZ_PYKF01000571.1	Protein Homology	CDS	4634	5977	.	+	0	ID=cds-WP_146712921.1;Parent=gene-C9F04_RS17025;Dbxref=Genbank:WP_146712921.1;Name=WP_146712921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9F04_RS17025;product=APC family permease;protein_id=WP_146712921.1;transl_table=11
NZ_PYKF01000571.1	RefSeq	gene	6379	6864	.	+	.	ID=gene-C9F04_RS17030;Name=C9F04_RS17030;end_range=6864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17030;old_locus_tag=C9F04_17580;partial=true
NZ_PYKF01000571.1	Protein Homology	CDS	6379	6864	.	+	0	ID=cds-WP_146712922.1;Parent=gene-C9F04_RS17030;Dbxref=Genbank:WP_146712922.1;Name=WP_146712922.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;end_range=6864,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F04_RS17030;partial=true;product=pyruvate kinase;protein_id=WP_146712922.1;transl_table=11
##sequence-region NZ_PYKF01000527.1 1 6843
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000527.1	RefSeq	region	1	6843	.	+	.	ID=NZ_PYKF01000527.1:1..6843;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000527.1	RefSeq	gene	2	511	.	+	.	ID=gene-C9F04_RS15785;Name=C9F04_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15785;old_locus_tag=C9F04_16270
NZ_PYKF01000527.1	Protein Homology	CDS	2	511	.	+	0	ID=cds-WP_146712857.1;Parent=gene-C9F04_RS15785;Dbxref=Genbank:WP_146712857.1;Name=WP_146712857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200663.1;locus_tag=C9F04_RS15785;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_146712857.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	pseudogene	526	1404	.	+	.	ID=gene-C9F04_RS15790;Name=C9F04_RS15790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15790;old_locus_tag=C9F04_16275;pseudo=true
NZ_PYKF01000527.1	Protein Homology	CDS	526	1404	.	+	0	ID=cds-C9F04_RS15790;Parent=gene-C9F04_RS15790;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9F04_RS15790;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	1404	2318	.	+	.	ID=gene-C9F04_RS15795;Name=C9F04_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15795;old_locus_tag=C9F04_16280
NZ_PYKF01000527.1	Protein Homology	CDS	1404	2318	.	+	0	ID=cds-WP_000105592.1;Parent=gene-C9F04_RS15795;Dbxref=Genbank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9F04_RS15795;product=alpha/beta hydrolase;protein_id=WP_000105592.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	2352	3317	.	+	.	ID=gene-C9F04_RS15800;Name=C9F04_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15800;old_locus_tag=C9F04_16285
NZ_PYKF01000527.1	Protein Homology	CDS	2352	3317	.	+	0	ID=cds-WP_000859020.1;Parent=gene-C9F04_RS15800;Dbxref=Genbank:WP_000859020.1;Name=WP_000859020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9F04_RS15800;product=LysR family transcriptional regulator;protein_id=WP_000859020.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	3262	3534	.	-	.	ID=gene-C9F04_RS15805;Name=C9F04_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15805;old_locus_tag=C9F04_16290
NZ_PYKF01000527.1	Protein Homology	CDS	3262	3534	.	-	0	ID=cds-WP_001675688.1;Parent=gene-C9F04_RS15805;Dbxref=Genbank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9F04_RS15805;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	4225	4623	.	+	.	ID=gene-C9F04_RS15810;Name=C9F04_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15810;old_locus_tag=C9F04_16295
NZ_PYKF01000527.1	Protein Homology	CDS	4225	4623	.	+	0	ID=cds-WP_000766845.1;Parent=gene-C9F04_RS15810;Dbxref=Genbank:WP_000766845.1;Name=WP_000766845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9F04_RS15810;product=hypothetical protein;protein_id=WP_000766845.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	4670	5428	.	-	.	ID=gene-C9F04_RS15815;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9F04_RS15815;old_locus_tag=C9F04_16300
NZ_PYKF01000527.1	Protein Homology	CDS	4670	5428	.	-	0	ID=cds-WP_080230028.1;Parent=gene-C9F04_RS15815;Dbxref=Genbank:WP_080230028.1;Name=WP_080230028.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9F04_RS15815;product=fimbrial biogenesis chaperone StbE;protein_id=WP_080230028.1;transl_table=11
NZ_PYKF01000527.1	RefSeq	gene	5394	6719	.	-	.	ID=gene-C9F04_RS15820;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9F04_RS15820;old_locus_tag=C9F04_16305
NZ_PYKF01000527.1	Protein Homology	CDS	5394	6719	.	-	0	ID=cds-WP_000899100.1;Parent=gene-C9F04_RS15820;Dbxref=Genbank:WP_000899100.1;Name=WP_000899100.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9F04_RS15820;product=fimbrial usher protein StbD;protein_id=WP_000899100.1;transl_table=11
##sequence-region NZ_PYKF01000645.1 1 20381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000645.1	RefSeq	region	1	20381	.	+	.	ID=NZ_PYKF01000645.1:1..20381;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000645.1	RefSeq	pseudogene	1	220	.	+	.	ID=gene-C9F04_RS19775;Name=C9F04_RS19775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19775;old_locus_tag=C9F04_20425;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000645.1	Protein Homology	CDS	1	220	.	+	1	ID=cds-C9F04_RS19775;Parent=gene-C9F04_RS19775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9F04_RS19775;partial=true;product=CDP-glucose 4%2C6-dehydratase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	247	1560	.	+	.	ID=gene-C9F04_RS19780;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=C9F04_RS19780;old_locus_tag=C9F04_20430
NZ_PYKF01000645.1	Protein Homology	CDS	247	1560	.	+	0	ID=cds-WP_146713060.1;Parent=gene-C9F04_RS19780;Dbxref=Genbank:WP_146713060.1;Name=WP_146713060.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=C9F04_RS19780;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_146713060.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	1588	2487	.	+	.	ID=gene-C9F04_RS19785;Name=C9F04_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19785;old_locus_tag=C9F04_20435
NZ_PYKF01000645.1	Protein Homology	CDS	1588	2487	.	+	0	ID=cds-WP_000143399.1;Parent=gene-C9F04_RS19785;Dbxref=Genbank:WP_000143399.1;Name=WP_000143399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=C9F04_RS19785;product=CDP-abequose synthase;protein_id=WP_000143399.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	2569	3861	.	+	.	ID=gene-C9F04_RS19790;Name=C9F04_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19790;old_locus_tag=C9F04_20440
NZ_PYKF01000645.1	Protein Homology	CDS	2569	3861	.	+	0	ID=cds-WP_080110891.1;Parent=gene-C9F04_RS19790;Dbxref=Genbank:WP_080110891.1;Name=WP_080110891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=C9F04_RS19790;product=MATE family efflux transporter;protein_id=WP_080110891.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	3866	4867	.	+	.	ID=gene-C9F04_RS19795;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=C9F04_RS19795;old_locus_tag=C9F04_20445
NZ_PYKF01000645.1	Protein Homology	CDS	3866	4867	.	+	0	ID=cds-WP_023201599.1;Parent=gene-C9F04_RS19795;Dbxref=Genbank:WP_023201599.1;Name=WP_023201599.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=C9F04_RS19795;product=abequosyltransferase RfbV;protein_id=WP_023201599.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	5188	6249	.	+	.	ID=gene-C9F04_RS19800;Name=C9F04_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19800;old_locus_tag=C9F04_20450
NZ_PYKF01000645.1	Protein Homology	CDS	5188	6249	.	+	0	ID=cds-WP_001521643.1;Parent=gene-C9F04_RS19800;Dbxref=Genbank:WP_001521643.1;Name=WP_001521643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=C9F04_RS19800;product=glycosyltransferase family 4 protein;protein_id=WP_001521643.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	6250	7194	.	+	.	ID=gene-C9F04_RS19805;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=C9F04_RS19805;old_locus_tag=C9F04_20455
NZ_PYKF01000645.1	Protein Homology	CDS	6250	7194	.	+	0	ID=cds-WP_000705151.1;Parent=gene-C9F04_RS19805;Dbxref=Genbank:WP_000705151.1;Name=WP_000705151.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=C9F04_RS19805;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705151.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	7195	8634	.	+	.	ID=gene-C9F04_RS19810;Name=C9F04_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19810;old_locus_tag=C9F04_20460
NZ_PYKF01000645.1	Protein Homology	CDS	7195	8634	.	+	0	ID=cds-WP_000009016.1;Parent=gene-C9F04_RS19810;Dbxref=Genbank:WP_000009016.1;Name=WP_000009016.1;Ontology_term=GO:0009103,GO:0004476,GO:0008905;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,mannose-phosphate guanylyltransferase activity|0008905||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=C9F04_RS19810;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009016.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	8621	10054	.	+	.	ID=gene-C9F04_RS19815;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=C9F04_RS19815;old_locus_tag=C9F04_20465
NZ_PYKF01000645.1	Protein Homology	CDS	8621	10054	.	+	0	ID=cds-WP_135369037.1;Parent=gene-C9F04_RS19815;Dbxref=Genbank:WP_135369037.1;Name=WP_135369037.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=C9F04_RS19815;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_135369037.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	10126	11556	.	+	.	ID=gene-C9F04_RS19820;Name=C9F04_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19820;old_locus_tag=C9F04_20470
NZ_PYKF01000645.1	Protein Homology	CDS	10126	11556	.	+	0	ID=cds-WP_000368703.1;Parent=gene-C9F04_RS19820;Dbxref=Genbank:WP_000368703.1;Name=WP_000368703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=C9F04_RS19820;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368703.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	11720	13126	.	+	.	ID=gene-C9F04_RS19825;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9F04_RS19825;old_locus_tag=C9F04_20475
NZ_PYKF01000645.1	Protein Homology	CDS	11720	13126	.	+	0	ID=cds-WP_000043532.1;Parent=gene-C9F04_RS19825;Dbxref=Genbank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9F04_RS19825;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	13363	14529	.	+	.	ID=gene-C9F04_RS19830;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9F04_RS19830;old_locus_tag=C9F04_20485
NZ_PYKF01000645.1	Protein Homology	CDS	13363	14529	.	+	0	ID=cds-WP_146713061.1;Parent=gene-C9F04_RS19830;Dbxref=Genbank:WP_146713061.1;Name=WP_146713061.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9F04_RS19830;product=UDP-glucose 6-dehydrogenase;protein_id=WP_146713061.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	14672	15655	.	+	.	ID=gene-C9F04_RS19835;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9F04_RS19835;old_locus_tag=C9F04_20490
NZ_PYKF01000645.1	Protein Homology	CDS	14672	15655	.	+	0	ID=cds-WP_135369389.1;Parent=gene-C9F04_RS19835;Dbxref=Genbank:WP_135369389.1;Name=WP_135369389.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9F04_RS19835;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_135369389.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	15736	16347	.	-	.	ID=gene-C9F04_RS19840;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9F04_RS19840;old_locus_tag=C9F04_20495
NZ_PYKF01000645.1	Protein Homology	CDS	15736	16347	.	-	0	ID=cds-WP_000954846.1;Parent=gene-C9F04_RS19840;Dbxref=Genbank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9F04_RS19840;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	16341	17117	.	-	.	ID=gene-C9F04_RS19845;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9F04_RS19845;old_locus_tag=C9F04_20500
NZ_PYKF01000645.1	Protein Homology	CDS	16341	17117	.	-	0	ID=cds-WP_000880125.1;Parent=gene-C9F04_RS19845;Dbxref=Genbank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9F04_RS19845;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	17099	17836	.	-	.	ID=gene-C9F04_RS19850;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9F04_RS19850;old_locus_tag=C9F04_20505
NZ_PYKF01000645.1	Protein Homology	CDS	17099	17836	.	-	0	ID=cds-WP_000586406.1;Parent=gene-C9F04_RS19850;Dbxref=Genbank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9F04_RS19850;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	17836	18426	.	-	.	ID=gene-C9F04_RS19855;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9F04_RS19855;old_locus_tag=C9F04_20510
NZ_PYKF01000645.1	Protein Homology	CDS	17836	18426	.	-	0	ID=cds-WP_146713062.1;Parent=gene-C9F04_RS19855;Dbxref=Genbank:WP_146713062.1;Name=WP_146713062.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9F04_RS19855;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_146713062.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	18426	19493	.	-	.	ID=gene-C9F04_RS19860;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9F04_RS19860;old_locus_tag=C9F04_20515
NZ_PYKF01000645.1	Protein Homology	CDS	18426	19493	.	-	0	ID=cds-WP_000080050.1;Parent=gene-C9F04_RS19860;Dbxref=Genbank:WP_000080050.1;Name=WP_000080050.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9F04_RS19860;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080050.1;transl_table=11
NZ_PYKF01000645.1	RefSeq	gene	19490	20381	.	-	.	ID=gene-C9F04_RS19865;Name=hisC;end_range=20381,.;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9F04_RS19865;old_locus_tag=C9F04_20520;partial=true
NZ_PYKF01000645.1	Protein Homology	CDS	19490	20381	.	-	1	ID=cds-WP_146713063.1;Parent=gene-C9F04_RS19865;Dbxref=Genbank:WP_146713063.1;Name=WP_146713063.1;Ontology_term=GO:0000105,GO:0004400;end_range=20381,.;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F04_RS19865;partial=true;product=histidinol-phosphate transaminase;protein_id=WP_146713063.1;transl_table=11
##sequence-region NZ_PYKF01000311.1 1 6743
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000311.1	RefSeq	region	1	6743	.	+	.	ID=NZ_PYKF01000311.1:1..6743;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000311.1	RefSeq	gene	1	383	.	+	.	ID=gene-C9F04_RS09130;Name=C9F04_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09130;old_locus_tag=C9F04_09435;partial=true;start_range=.,1
NZ_PYKF01000311.1	Protein Homology	CDS	1	383	.	+	2	ID=cds-WP_146712527.1;Parent=gene-C9F04_RS09130;Dbxref=Genbank:WP_146712527.1;Name=WP_146712527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9F04_RS09130;partial=true;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_146712527.1;start_range=.,1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	370	2523	.	-	.	ID=gene-C9F04_RS09135;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9F04_RS09135;old_locus_tag=C9F04_09440
NZ_PYKF01000311.1	Protein Homology	CDS	370	2523	.	-	0	ID=cds-WP_146712528.1;Parent=gene-C9F04_RS09135;Dbxref=Genbank:WP_146712528.1;Name=WP_146712528.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9F04_RS09135;product=YccS family putative transporter;protein_id=WP_146712528.1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	2542	2988	.	-	.	ID=gene-C9F04_RS09140;Name=C9F04_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09140;old_locus_tag=C9F04_09445
NZ_PYKF01000311.1	Protein Homology	CDS	2542	2988	.	-	0	ID=cds-WP_001261222.1;Parent=gene-C9F04_RS09140;Dbxref=Genbank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9F04_RS09140;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	3112	5166	.	+	.	ID=gene-C9F04_RS09145;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9F04_RS09145;old_locus_tag=C9F04_09450
NZ_PYKF01000311.1	Protein Homology	CDS	3112	5166	.	+	0	ID=cds-WP_135369158.1;Parent=gene-C9F04_RS09145;Dbxref=Genbank:WP_135369158.1;Name=WP_135369158.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9F04_RS09145;product=DNA helicase IV;protein_id=WP_135369158.1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	5202	5660	.	-	.	ID=gene-C9F04_RS09150;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9F04_RS09150;old_locus_tag=C9F04_09455
NZ_PYKF01000311.1	Protein Homology	CDS	5202	5660	.	-	0	ID=cds-WP_000424187.1;Parent=gene-C9F04_RS09150;Dbxref=Genbank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9F04_RS09150;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	5755	6417	.	-	.	ID=gene-C9F04_RS09155;Name=C9F04_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09155;old_locus_tag=C9F04_09460
NZ_PYKF01000311.1	Protein Homology	CDS	5755	6417	.	-	0	ID=cds-WP_000847719.1;Parent=gene-C9F04_RS09155;Dbxref=Genbank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9F04_RS09155;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11
NZ_PYKF01000311.1	RefSeq	gene	6591	6743	.	+	.	ID=gene-C9F04_RS09160;Name=C9F04_RS09160;end_range=6743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09160;old_locus_tag=C9F04_09465;partial=true
NZ_PYKF01000311.1	Protein Homology	CDS	6591	6743	.	+	0	ID=cds-WP_186799015.1;Parent=gene-C9F04_RS09160;Dbxref=Genbank:WP_186799015.1;Name=WP_186799015.1;end_range=6743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9F04_RS09160;partial=true;product=CoA-binding protein;protein_id=WP_186799015.1;transl_table=11
##sequence-region NZ_PYKF01000499.1 1 6740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000499.1	RefSeq	region	1	6740	.	+	.	ID=NZ_PYKF01000499.1:1..6740;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000499.1	RefSeq	gene	1	128	.	-	.	ID=gene-C9F04_RS27075;Name=C9F04_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27075;partial=true;start_range=.,1
NZ_PYKF01000499.1	Protein Homology	CDS	1	128	.	-	0	ID=cds-WP_261771228.1;Parent=gene-C9F04_RS27075;Dbxref=Genbank:WP_261771228.1;Name=WP_261771228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461052.4;locus_tag=C9F04_RS27075;partial=true;product=hypothetical protein;protein_id=WP_261771228.1;start_range=.,1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	100	1065	.	-	.	ID=gene-C9F04_RS14980;Name=C9F04_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14980;old_locus_tag=C9F04_15460
NZ_PYKF01000499.1	Protein Homology	CDS	100	1065	.	-	0	ID=cds-WP_001041701.1;Parent=gene-C9F04_RS14980;Dbxref=Genbank:WP_001041701.1;Name=WP_001041701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9F04_RS14980;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	1068	2189	.	-	.	ID=gene-C9F04_RS14985;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9F04_RS14985;old_locus_tag=C9F04_15465
NZ_PYKF01000499.1	Protein Homology	CDS	1068	2189	.	-	0	ID=cds-WP_000048160.1;Parent=gene-C9F04_RS14985;Dbxref=Genbank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9F04_RS14985;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	2213	2767	.	-	.	ID=gene-C9F04_RS14990;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9F04_RS14990;old_locus_tag=C9F04_15470
NZ_PYKF01000499.1	Protein Homology	CDS	2213	2767	.	-	0	ID=cds-WP_001153601.1;Parent=gene-C9F04_RS14990;Dbxref=Genbank:WP_001153601.1;Name=WP_001153601.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9F04_RS14990;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153601.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	2783	3529	.	-	.	ID=gene-C9F04_RS14995;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9F04_RS14995;old_locus_tag=C9F04_15475
NZ_PYKF01000499.1	Protein Homology	CDS	2783	3529	.	-	0	ID=cds-WP_135369706.1;Parent=gene-C9F04_RS14995;Dbxref=Genbank:WP_135369706.1;Name=WP_135369706.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9F04_RS14995;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_135369706.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	3542	4756	.	-	.	ID=gene-C9F04_RS15000;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9F04_RS15000;old_locus_tag=C9F04_15480
NZ_PYKF01000499.1	Protein Homology	CDS	3542	4756	.	-	0	ID=cds-WP_000091403.1;Parent=gene-C9F04_RS15000;Dbxref=Genbank:WP_000091403.1;Name=WP_000091403.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9F04_RS15000;product=colanic acid polymerase WcaD;protein_id=WP_000091403.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	gene	4731	5948	.	-	.	ID=gene-C9F04_RS15005;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9F04_RS15005;old_locus_tag=C9F04_15485
NZ_PYKF01000499.1	Protein Homology	CDS	4731	5948	.	-	0	ID=cds-WP_146712815.1;Parent=gene-C9F04_RS15005;Dbxref=Genbank:WP_146712815.1;Name=WP_146712815.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9F04_RS15005;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_146712815.1;transl_table=11
NZ_PYKF01000499.1	RefSeq	pseudogene	5954	6433	.	-	.	ID=gene-C9F04_RS15010;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=pseudogene;locus_tag=C9F04_RS15010;old_locus_tag=C9F04_15490;partial=true;pseudo=true;start_range=.,5954
NZ_PYKF01000499.1	Protein Homology	CDS	5954	6433	.	-	0	ID=cds-C9F04_RS15010;Parent=gene-C9F04_RS15010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=C9F04_RS15010;partial=true;product=colanic acid biosynthesis acetyltransferase WcaB;pseudo=true;start_range=.,5954;transl_table=11
NZ_PYKF01000499.1	RefSeq	pseudogene	6436	6740	.	-	.	ID=gene-C9F04_RS15015;Name=C9F04_RS15015;end_range=6740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15015;old_locus_tag=C9F04_15495;partial=true;pseudo=true
NZ_PYKF01000499.1	Protein Homology	CDS	6436	6740	.	-	2	ID=cds-C9F04_RS15015;Parent=gene-C9F04_RS15015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F04_RS15015;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000292.1 1 6734
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000292.1	RefSeq	region	1	6734	.	+	.	ID=NZ_PYKF01000292.1:1..6734;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000292.1	RefSeq	gene	1	1089	.	+	.	ID=gene-C9F04_RS08485;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9F04_RS08485;old_locus_tag=C9F04_08760;partial=true;start_range=.,1
NZ_PYKF01000292.1	Protein Homology	CDS	1	1089	.	+	0	ID=cds-WP_146712503.1;Parent=gene-C9F04_RS08485;Dbxref=Genbank:WP_146712503.1;Name=WP_146712503.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9F04_RS08485;partial=true;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_146712503.1;start_range=.,1;transl_table=11
NZ_PYKF01000292.1	RefSeq	gene	1221	2765	.	+	.	ID=gene-C9F04_RS08490;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9F04_RS08490;old_locus_tag=C9F04_08765
NZ_PYKF01000292.1	Protein Homology	CDS	1221	2765	.	+	0	ID=cds-WP_000382570.1;Parent=gene-C9F04_RS08490;Dbxref=Genbank:WP_000382570.1;Name=WP_000382570.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9F04_RS08490;product=maltose ABC transporter permease MalF;protein_id=WP_000382570.1;transl_table=11
NZ_PYKF01000292.1	RefSeq	gene	2780	3670	.	+	.	ID=gene-C9F04_RS08495;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9F04_RS08495;old_locus_tag=C9F04_08770
NZ_PYKF01000292.1	Protein Homology	CDS	2780	3670	.	+	0	ID=cds-WP_001252081.1;Parent=gene-C9F04_RS08495;Dbxref=Genbank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9F04_RS08495;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11
NZ_PYKF01000292.1	RefSeq	gene	3836	4246	.	-	.	ID=gene-C9F04_RS08500;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9F04_RS08500;old_locus_tag=C9F04_08775
NZ_PYKF01000292.1	Protein Homology	CDS	3836	4246	.	-	0	ID=cds-WP_000982752.1;Parent=gene-C9F04_RS08500;Dbxref=Genbank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9F04_RS08500;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11
NZ_PYKF01000292.1	RefSeq	gene	4389	6485	.	-	.	ID=gene-C9F04_RS08505;Name=C9F04_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08505;old_locus_tag=C9F04_08780
NZ_PYKF01000292.1	Protein Homology	CDS	4389	6485	.	-	0	ID=cds-WP_000750805.1;Parent=gene-C9F04_RS08505;Dbxref=Genbank:WP_000750805.1;Name=WP_000750805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9F04_RS08505;product=YjbH domain-containing protein;protein_id=WP_000750805.1;transl_table=11
NZ_PYKF01000292.1	RefSeq	gene	6485	6734	.	-	.	ID=gene-C9F04_RS08510;Name=C9F04_RS08510;end_range=6734,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08510;old_locus_tag=C9F04_08785;partial=true
NZ_PYKF01000292.1	Protein Homology	CDS	6485	6734	.	-	1	ID=cds-WP_186799010.1;Parent=gene-C9F04_RS08510;Dbxref=Genbank:WP_186799010.1;Name=WP_186799010.1;end_range=6734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9F04_RS08510;partial=true;product=capsule biosynthesis GfcC family protein;protein_id=WP_186799010.1;transl_table=11
##sequence-region NZ_PYKF01000272.1 1 6729
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000272.1	RefSeq	region	1	6729	.	+	.	ID=NZ_PYKF01000272.1:1..6729;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000272.1	RefSeq	gene	1	461	.	-	.	ID=gene-C9F04_RS07515;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9F04_RS07515;old_locus_tag=C9F04_07760;partial=true;start_range=.,1
NZ_PYKF01000272.1	Protein Homology	CDS	1	461	.	-	0	ID=cds-WP_146712477.1;Parent=gene-C9F04_RS07515;Dbxref=Genbank:WP_146712477.1;Name=WP_146712477.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9F04_RS07515;partial=true;product=manganese-binding transcriptional regulator MntR;protein_id=WP_146712477.1;start_range=.,1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	647	775	.	+	.	ID=gene-C9F04_RS07520;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9F04_RS07520;old_locus_tag=C9F04_07765
NZ_PYKF01000272.1	Protein Homology	CDS	647	775	.	+	0	ID=cds-WP_001001755.1;Parent=gene-C9F04_RS07520;Dbxref=Genbank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9F04_RS07520;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	1040	2620	.	+	.	ID=gene-C9F04_RS07525;Name=C9F04_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07525;old_locus_tag=C9F04_07770
NZ_PYKF01000272.1	Protein Homology	CDS	1040	2620	.	+	0	ID=cds-WP_135369606.1;Parent=gene-C9F04_RS07525;Dbxref=Genbank:WP_135369606.1;Name=WP_135369606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9F04_RS07525;product=phosphoethanolamine transferase;protein_id=WP_135369606.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	2683	3198	.	-	.	ID=gene-C9F04_RS07530;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9F04_RS07530;old_locus_tag=C9F04_07775
NZ_PYKF01000272.1	Protein Homology	CDS	2683	3198	.	-	0	ID=cds-WP_000716763.1;Parent=gene-C9F04_RS07530;Dbxref=Genbank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9F04_RS07530;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	3552	4439	.	+	.	ID=gene-C9F04_RS07535;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9F04_RS07535;old_locus_tag=C9F04_07780
NZ_PYKF01000272.1	Protein Homology	CDS	3552	4439	.	+	0	ID=cds-WP_058653246.1;Parent=gene-C9F04_RS07535;Dbxref=Genbank:WP_058653246.1;Name=WP_058653246.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9F04_RS07535;product=threonine/homoserine exporter RhtA;protein_id=WP_058653246.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	4742	5245	.	+	.	ID=gene-C9F04_RS07540;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9F04_RS07540;old_locus_tag=C9F04_07785
NZ_PYKF01000272.1	Protein Homology	CDS	4742	5245	.	+	0	ID=cds-WP_000100805.1;Parent=gene-C9F04_RS07540;Dbxref=Genbank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9F04_RS07540;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	gene	5722	6468	.	+	.	ID=gene-C9F04_RS07545;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9F04_RS07545;old_locus_tag=C9F04_07790
NZ_PYKF01000272.1	Protein Homology	CDS	5722	6468	.	+	0	ID=cds-WP_000838671.1;Parent=gene-C9F04_RS07545;Dbxref=Genbank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9F04_RS07545;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11
NZ_PYKF01000272.1	RefSeq	pseudogene	6612	6729	.	+	.	ID=gene-C9F04_RS07550;Name=glnP;end_range=6729,.;gbkey=Gene;gene=glnP;gene_biotype=pseudogene;locus_tag=C9F04_RS07550;old_locus_tag=C9F04_07795;partial=true;pseudo=true
NZ_PYKF01000272.1	Protein Homology	CDS	6612	6729	.	+	0	ID=cds-C9F04_RS07550;Parent=gene-C9F04_RS07550;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6729,.;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459806.1;locus_tag=C9F04_RS07550;partial=true;product=glutamine ABC transporter permease GlnP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000650.1 1 6727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000650.1	RefSeq	region	1	6727	.	+	.	ID=NZ_PYKF01000650.1:1..6727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000650.1	RefSeq	gene	69	716	.	-	.	ID=gene-C9F04_RS19930;Name=C9F04_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19930;old_locus_tag=C9F04_20585
NZ_PYKF01000650.1	Protein Homology	CDS	69	716	.	-	0	ID=cds-WP_045341191.1;Parent=gene-C9F04_RS19930;Dbxref=Genbank:WP_045341191.1;Name=WP_045341191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9F04_RS19930;product=amino acid ABC transporter permease;protein_id=WP_045341191.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	723	1484	.	-	.	ID=gene-C9F04_RS19935;Name=C9F04_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19935;old_locus_tag=C9F04_20590
NZ_PYKF01000650.1	Protein Homology	CDS	723	1484	.	-	0	ID=cds-WP_135369474.1;Parent=gene-C9F04_RS19935;Dbxref=Genbank:WP_135369474.1;Name=WP_135369474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9F04_RS19935;product=transporter substrate-binding domain-containing protein;protein_id=WP_135369474.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	2394	2738	.	+	.	ID=gene-C9F04_RS19940;Name=C9F04_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19940;old_locus_tag=C9F04_20595
NZ_PYKF01000650.1	Protein Homology	CDS	2394	2738	.	+	0	ID=cds-WP_135369473.1;Parent=gene-C9F04_RS19940;Dbxref=Genbank:WP_135369473.1;Name=WP_135369473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9F04_RS19940;product=DUF1294 domain-containing protein;protein_id=WP_135369473.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	2859	4085	.	-	.	ID=gene-C9F04_RS19945;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9F04_RS19945;old_locus_tag=C9F04_20600
NZ_PYKF01000650.1	Protein Homology	CDS	2859	4085	.	-	0	ID=cds-WP_001131430.1;Parent=gene-C9F04_RS19945;Dbxref=Genbank:WP_001131430.1;Name=WP_001131430.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9F04_RS19945;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131430.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	4511	5227	.	+	.	ID=gene-C9F04_RS19950;Name=C9F04_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19950;old_locus_tag=C9F04_20605
NZ_PYKF01000650.1	Protein Homology	CDS	4511	5227	.	+	0	ID=cds-WP_000997196.1;Parent=gene-C9F04_RS19950;Dbxref=Genbank:WP_000997196.1;Name=WP_000997196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9F04_RS19950;product=membrane protein;protein_id=WP_000997196.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	5356	5757	.	-	.	ID=gene-C9F04_RS19955;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9F04_RS19955;old_locus_tag=C9F04_20610
NZ_PYKF01000650.1	Protein Homology	CDS	5356	5757	.	-	0	ID=cds-WP_077918060.1;Parent=gene-C9F04_RS19955;Dbxref=Genbank:WP_077918060.1;Name=WP_077918060.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9F04_RS19955;product=type III secretion system effector SteB;protein_id=WP_077918060.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	gene	6275	6550	.	+	.	ID=gene-C9F04_RS19960;Name=C9F04_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19960;old_locus_tag=C9F04_20615
NZ_PYKF01000650.1	Protein Homology	CDS	6275	6550	.	+	0	ID=cds-WP_135369479.1;Parent=gene-C9F04_RS19960;Dbxref=Genbank:WP_135369479.1;Name=WP_135369479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9F04_RS19960;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_135369479.1;transl_table=11
NZ_PYKF01000650.1	RefSeq	pseudogene	6582	6727	.	+	.	ID=gene-C9F04_RS19965;Name=C9F04_RS19965;end_range=6727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19965;old_locus_tag=C9F04_20620;partial=true;pseudo=true
NZ_PYKF01000650.1	Protein Homology	CDS	6582	6727	.	+	0	ID=cds-C9F04_RS19965;Parent=gene-C9F04_RS19965;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F04_RS19965;partial=true;product=S-(hydroxymethyl)glutathione dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000587.1 1 6720
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000587.1	RefSeq	region	1	6720	.	+	.	ID=NZ_PYKF01000587.1:1..6720;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000587.1	RefSeq	gene	1	496	.	+	.	ID=gene-C9F04_RS17480;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9F04_RS17480;old_locus_tag=C9F04_18040;partial=true;start_range=.,1
NZ_PYKF01000587.1	Protein Homology	CDS	1	496	.	+	1	ID=cds-WP_146712948.1;Parent=gene-C9F04_RS17480;Dbxref=Genbank:WP_146712948.1;Name=WP_146712948.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9F04_RS17480;partial=true;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_146712948.1;start_range=.,1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	471	1742	.	+	.	ID=gene-C9F04_RS17485;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9F04_RS17485;old_locus_tag=C9F04_18045
NZ_PYKF01000587.1	Protein Homology	CDS	471	1742	.	+	0	ID=cds-WP_135369765.1;Parent=gene-C9F04_RS17485;Dbxref=Genbank:WP_135369765.1;Name=WP_135369765.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9F04_RS17485;product=Fe-S cluster assembly protein SufD;protein_id=WP_135369765.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	1739	2959	.	+	.	ID=gene-C9F04_RS17490;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9F04_RS17490;old_locus_tag=C9F04_18050
NZ_PYKF01000587.1	Protein Homology	CDS	1739	2959	.	+	0	ID=cds-WP_000143859.1;Parent=gene-C9F04_RS17490;Dbxref=Genbank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9F04_RS17490;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	2972	3388	.	+	.	ID=gene-C9F04_RS17495;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9F04_RS17495;old_locus_tag=C9F04_18055
NZ_PYKF01000587.1	Protein Homology	CDS	2972	3388	.	+	0	ID=cds-WP_000729470.1;Parent=gene-C9F04_RS17495;Dbxref=Genbank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9F04_RS17495;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	3543	4544	.	+	.	ID=gene-C9F04_RS17500;Name=C9F04_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17500;old_locus_tag=C9F04_18060
NZ_PYKF01000587.1	Protein Homology	CDS	3543	4544	.	+	0	ID=cds-WP_000817059.1;Parent=gene-C9F04_RS17500;Dbxref=Genbank:WP_000817059.1;Name=WP_000817059.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9F04_RS17500;product=L%2CD-transpeptidase family protein;protein_id=WP_000817059.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	4611	4850	.	-	.	ID=gene-C9F04_RS17505;Name=C9F04_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17505;old_locus_tag=C9F04_18065
NZ_PYKF01000587.1	Protein Homology	CDS	4611	4850	.	-	0	ID=cds-WP_017465453.1;Parent=gene-C9F04_RS17505;Dbxref=Genbank:WP_017465453.1;Name=WP_017465453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F04_RS17505;product=major outer membrane lipoprotein;protein_id=WP_017465453.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	4934	5173	.	-	.	ID=gene-C9F04_RS17510;Name=C9F04_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17510;old_locus_tag=C9F04_18070
NZ_PYKF01000587.1	Protein Homology	CDS	4934	5173	.	-	0	ID=cds-WP_045720667.1;Parent=gene-C9F04_RS17510;Dbxref=Genbank:WP_045720667.1;Name=WP_045720667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505368.1;locus_tag=C9F04_RS17510;product=major outer membrane lipoprotein;protein_id=WP_045720667.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	5256	5492	.	-	.	ID=gene-C9F04_RS17515;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9F04_RS17515;old_locus_tag=C9F04_18075
NZ_PYKF01000587.1	Protein Homology	CDS	5256	5492	.	-	0	ID=cds-WP_001082307.1;Parent=gene-C9F04_RS17515;Dbxref=Genbank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9F04_RS17515;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11
NZ_PYKF01000587.1	RefSeq	gene	5803	6720	.	-	.	ID=gene-C9F04_RS17520;Name=pyk;end_range=6720,.;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9F04_RS17520;old_locus_tag=C9F04_18080;partial=true
NZ_PYKF01000587.1	Protein Homology	CDS	5803	6720	.	-	0	ID=cds-WP_146712949.1;Parent=gene-C9F04_RS17520;Dbxref=Genbank:WP_146712949.1;Name=WP_146712949.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;end_range=6720,.;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F04_RS17520;partial=true;product=pyruvate kinase;protein_id=WP_146712949.1;transl_table=11
##sequence-region NZ_PYKF01000316.1 1 6599
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000316.1	RefSeq	region	1	6599	.	+	.	ID=NZ_PYKF01000316.1:1..6599;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000316.1	RefSeq	gene	1	2362	.	+	.	ID=gene-C9F04_RS09265;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9F04_RS09265;old_locus_tag=C9F04_09570;partial=true;start_range=.,1
NZ_PYKF01000316.1	Protein Homology	CDS	1	2362	.	+	1	ID=cds-WP_146712535.1;Parent=gene-C9F04_RS09265;Dbxref=Genbank:WP_146712535.1;Name=WP_146712535.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F04_RS09265;partial=true;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_146712535.1;start_range=.,1;transl_table=11
NZ_PYKF01000316.1	RefSeq	gene	2818	3711	.	+	.	ID=gene-C9F04_RS09275;Name=C9F04_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09275;old_locus_tag=C9F04_09580
NZ_PYKF01000316.1	Protein Homology	CDS	2818	3711	.	+	0	ID=cds-WP_079840015.1;Parent=gene-C9F04_RS09275;Dbxref=Genbank:WP_079840015.1;Name=WP_079840015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9F04_RS09275;product=transporter;protein_id=WP_079840015.1;transl_table=11
NZ_PYKF01000316.1	RefSeq	gene	3759	5192	.	-	.	ID=gene-C9F04_RS09280;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9F04_RS09280;old_locus_tag=C9F04_09585
NZ_PYKF01000316.1	Protein Homology	CDS	3759	5192	.	-	0	ID=cds-WP_135369165.1;Parent=gene-C9F04_RS09280;Dbxref=Genbank:WP_135369165.1;Name=WP_135369165.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F04_RS09280;product=6-phospho-beta-glucosidase BglA;protein_id=WP_135369165.1;transl_table=11
NZ_PYKF01000316.1	RefSeq	gene	5350	5661	.	+	.	ID=gene-C9F04_RS09285;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9F04_RS09285;old_locus_tag=C9F04_09590
NZ_PYKF01000316.1	Protein Homology	CDS	5350	5661	.	+	0	ID=cds-WP_001182976.1;Parent=gene-C9F04_RS09285;Dbxref=Genbank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9F04_RS09285;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11
NZ_PYKF01000316.1	RefSeq	gene	5825	6484	.	+	.	ID=gene-C9F04_RS09290;Name=C9F04_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09290;old_locus_tag=C9F04_09595
NZ_PYKF01000316.1	Protein Homology	CDS	5825	6484	.	+	0	ID=cds-WP_000250289.1;Parent=gene-C9F04_RS09290;Dbxref=Genbank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9F04_RS09290;product=hemolysin III family protein;protein_id=WP_000250289.1;transl_table=11
##sequence-region NZ_PYKF01000496.1 1 6564
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000496.1	RefSeq	region	1	6564	.	+	.	ID=NZ_PYKF01000496.1:1..6564;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000496.1	RefSeq	pseudogene	1	219	.	+	.	ID=gene-C9F04_RS14685;Name=C9F04_RS14685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14685;old_locus_tag=C9F04_15170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000496.1	Protein Homology	CDS	1	219	.	+	0	ID=cds-C9F04_RS14685;Parent=gene-C9F04_RS14685;Note=Represses a number of genes involved in the response to DNA damage%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9F04_RS14685;partial=true;product=LexA repressor;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	398	1723	.	+	.	ID=gene-C9F04_RS14690;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9F04_RS14690;old_locus_tag=C9F04_15175
NZ_PYKF01000496.1	Protein Homology	CDS	398	1723	.	+	0	ID=cds-WP_146712805.1;Parent=gene-C9F04_RS14690;Dbxref=Genbank:WP_146712805.1;Name=WP_146712805.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9F04_RS14690;product=MATE family efflux transporter DinF;protein_id=WP_146712805.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	1720	1833	.	+	.	ID=gene-C9F04_RS14695;Name=C9F04_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14695;old_locus_tag=C9F04_15180
NZ_PYKF01000496.1	Protein Homology	CDS	1720	1833	.	+	0	ID=cds-WP_001575282.1;Parent=gene-C9F04_RS14695;Dbxref=Genbank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9F04_RS14695;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	1855	2064	.	+	.	ID=gene-C9F04_RS14700;Name=C9F04_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14700;old_locus_tag=C9F04_15185
NZ_PYKF01000496.1	Protein Homology	CDS	1855	2064	.	+	0	ID=cds-WP_001030592.1;Parent=gene-C9F04_RS14700;Dbxref=Genbank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9F04_RS14700;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	2164	2679	.	-	.	ID=gene-C9F04_RS14705;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9F04_RS14705;old_locus_tag=C9F04_15190
NZ_PYKF01000496.1	Protein Homology	CDS	2164	2679	.	-	0	ID=cds-WP_000416271.1;Parent=gene-C9F04_RS14705;Dbxref=Genbank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9F04_RS14705;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	2926	4236	.	+	.	ID=gene-C9F04_RS14710;Name=C9F04_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14710;old_locus_tag=C9F04_15195
NZ_PYKF01000496.1	Protein Homology	CDS	2926	4236	.	+	0	ID=cds-WP_146712806.1;Parent=gene-C9F04_RS14710;Dbxref=Genbank:WP_146712806.1;Name=WP_146712806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9F04_RS14710;product=conjugal transfer protein TraF;protein_id=WP_146712806.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	4324	5322	.	+	.	ID=gene-C9F04_RS14715;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9F04_RS14715;old_locus_tag=C9F04_15200
NZ_PYKF01000496.1	Protein Homology	CDS	4324	5322	.	+	0	ID=cds-WP_146712807.1;Parent=gene-C9F04_RS14715;Dbxref=Genbank:WP_146712807.1;Name=WP_146712807.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9F04_RS14715;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_146712807.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	gene	5490	5732	.	+	.	ID=gene-C9F04_RS14720;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9F04_RS14720;old_locus_tag=C9F04_15205
NZ_PYKF01000496.1	Protein Homology	CDS	5490	5732	.	+	0	ID=cds-WP_000891417.1;Parent=gene-C9F04_RS14720;Dbxref=Genbank:WP_000891417.1;Name=WP_000891417.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9F04_RS14720;product=envelope stress response protein PspG;protein_id=WP_000891417.1;transl_table=11
NZ_PYKF01000496.1	RefSeq	pseudogene	5907	6564	.	-	.	ID=gene-C9F04_RS14725;Name=C9F04_RS14725;end_range=6564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14725;old_locus_tag=C9F04_15210;partial=true;pseudo=true
NZ_PYKF01000496.1	Protein Homology	CDS	5907	6564	.	-	1	ID=cds-C9F04_RS14725;Parent=gene-C9F04_RS14725;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0008270,GO:0016491;end_range=6564,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9F04_RS14725;partial=true;product=NADPH:quinone reductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000141.1 1 6560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000141.1	RefSeq	region	1	6560	.	+	.	ID=NZ_PYKF01000141.1:1..6560;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000141.1	RefSeq	pseudogene	1	457	.	+	.	ID=gene-C9F04_RS02915;Name=C9F04_RS02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02915;old_locus_tag=C9F04_03015;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000141.1	Protein Homology	CDS	1	457	.	+	1	ID=cds-C9F04_RS02915;Parent=gene-C9F04_RS02915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F04_RS02915;partial=true;product=AsmA family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	497	1819	.	-	.	ID=gene-C9F04_RS02920;Name=C9F04_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02920;old_locus_tag=C9F04_03020
NZ_PYKF01000141.1	Protein Homology	CDS	497	1819	.	-	0	ID=cds-WP_079897585.1;Parent=gene-C9F04_RS02920;Dbxref=Genbank:WP_079897585.1;Name=WP_079897585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9F04_RS02920;product=MHS family MFS transporter;protein_id=WP_079897585.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	2170	3198	.	-	.	ID=gene-C9F04_RS02925;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9F04_RS02925;old_locus_tag=C9F04_03025
NZ_PYKF01000141.1	Protein Homology	CDS	2170	3198	.	-	0	ID=cds-WP_000191231.1;Parent=gene-C9F04_RS02925;Dbxref=Genbank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9F04_RS02925;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	3271	4170	.	-	.	ID=gene-C9F04_RS02930;Name=C9F04_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02930;old_locus_tag=C9F04_03030
NZ_PYKF01000141.1	Protein Homology	CDS	3271	4170	.	-	0	ID=cds-WP_186798990.1;Parent=gene-C9F04_RS02930;Dbxref=Genbank:WP_186798990.1;Name=WP_186798990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9F04_RS02930;product=LysR family transcriptional regulator;protein_id=WP_186798990.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	4261	4431	.	-	.	ID=gene-C9F04_RS26550;Name=C9F04_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26550
NZ_PYKF01000141.1	GeneMarkS-2+	CDS	4261	4431	.	-	0	ID=cds-WP_153246886.1;Parent=gene-C9F04_RS26550;Dbxref=Genbank:WP_153246886.1;Name=WP_153246886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26550;product=hypothetical protein;protein_id=WP_153246886.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	4801	5403	.	+	.	ID=gene-C9F04_RS02935;Name=C9F04_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02935;old_locus_tag=C9F04_03040
NZ_PYKF01000141.1	Protein Homology	CDS	4801	5403	.	+	0	ID=cds-WP_001196084.1;Parent=gene-C9F04_RS02935;Dbxref=Genbank:WP_001196084.1;Name=WP_001196084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9F04_RS02935;product=response regulator transcription factor;protein_id=WP_001196084.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	5409	5765	.	-	.	ID=gene-C9F04_RS02940;Name=C9F04_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02940;old_locus_tag=C9F04_03045
NZ_PYKF01000141.1	Protein Homology	CDS	5409	5765	.	-	0	ID=cds-WP_001120249.1;Parent=gene-C9F04_RS02940;Dbxref=Genbank:WP_001120249.1;Name=WP_001120249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9F04_RS02940;product=lysozyme;protein_id=WP_001120249.1;transl_table=11
NZ_PYKF01000141.1	RefSeq	gene	6046	6560	.	+	.	ID=gene-C9F04_RS02945;Name=C9F04_RS02945;end_range=6560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02945;old_locus_tag=C9F04_03050;partial=true
NZ_PYKF01000141.1	Protein Homology	CDS	6046	6560	.	+	0	ID=cds-WP_261770740.1;Parent=gene-C9F04_RS02945;Dbxref=Genbank:WP_261770740.1;Name=WP_261770740.1;end_range=6560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F04_RS02945;partial=true;product=STY4199 family HEPN domain-containing protein;protein_id=WP_261770740.1;transl_table=11
##sequence-region NZ_PYKF01000711.1 1 6560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000711.1	RefSeq	region	1	6560	.	+	.	ID=NZ_PYKF01000711.1:1..6560;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000711.1	RefSeq	gene	1	1247	.	+	.	ID=gene-C9F04_RS22070;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9F04_RS22070;old_locus_tag=C9F04_22805;partial=true;start_range=.,1
NZ_PYKF01000711.1	Protein Homology	CDS	1	1247	.	+	2	ID=cds-WP_186799075.1;Parent=gene-C9F04_RS22070;Dbxref=Genbank:WP_186799075.1;Name=WP_186799075.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9F04_RS22070;partial=true;product=gluconate transporter;protein_id=WP_186799075.1;start_range=.,1;transl_table=11
NZ_PYKF01000711.1	RefSeq	pseudogene	1170	1543	.	-	.	ID=gene-C9F04_RS22075;Name=C9F04_RS22075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22075;old_locus_tag=C9F04_22810;partial=true;pseudo=true;start_range=.,1170
NZ_PYKF01000711.1	Protein Homology	CDS	1170	1543	.	-	0	ID=cds-C9F04_RS22075;Parent=gene-C9F04_RS22075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9F04_RS22075;partial=true;product=MarC family protein;pseudo=true;start_range=.,1170;transl_table=11
NZ_PYKF01000711.1	RefSeq	gene	1670	2776	.	+	.	ID=gene-C9F04_RS22080;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F04_RS22080;old_locus_tag=C9F04_22815
NZ_PYKF01000711.1	Protein Homology	CDS	1670	2776	.	+	0	ID=cds-WP_000799940.1;Parent=gene-C9F04_RS22080;Dbxref=Genbank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9F04_RS22080;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11
NZ_PYKF01000711.1	RefSeq	gene	3123	5309	.	+	.	ID=gene-C9F04_RS22085;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9F04_RS22085;old_locus_tag=C9F04_22820
NZ_PYKF01000711.1	Protein Homology	CDS	3123	5309	.	+	0	ID=cds-WP_020899336.1;Parent=gene-C9F04_RS22085;Dbxref=Genbank:WP_020899336.1;Name=WP_020899336.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9F04_RS22085;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_020899336.1;transl_table=11
NZ_PYKF01000711.1	RefSeq	gene	5306	6560	.	+	.	ID=gene-C9F04_RS22090;Name=C9F04_RS22090;end_range=6560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22090;old_locus_tag=C9F04_22825;partial=true
NZ_PYKF01000711.1	Protein Homology	CDS	5306	6560	.	+	0	ID=cds-WP_261771460.1;Parent=gene-C9F04_RS22090;Dbxref=Genbank:WP_261771460.1;Name=WP_261771460.1;Ontology_term=GO:0005975,GO:0003824;end_range=6560,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121609.1;locus_tag=C9F04_RS22090;partial=true;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_261771460.1;transl_table=11
##sequence-region NZ_PYKF01000815.1 1 20237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000815.1	RefSeq	region	1	20237	.	+	.	ID=NZ_PYKF01000815.1:1..20237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000815.1	RefSeq	gene	1	152	.	+	.	ID=gene-C9F04_RS25585;Name=C9F04_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25585;old_locus_tag=C9F04_26460;partial=true;start_range=.,1
NZ_PYKF01000815.1	Protein Homology	CDS	1	152	.	+	2	ID=cds-WP_146713357.1;Parent=gene-C9F04_RS25585;Dbxref=Genbank:WP_146713357.1;Name=WP_146713357.1;Ontology_term=GO:0031167,GO:0016436;gbkey=CDS;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9F04_RS25585;partial=true;product=RsmE family RNA methyltransferase;protein_id=WP_146713357.1;start_range=.,1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	172	1119	.	+	.	ID=gene-C9F04_RS25590;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9F04_RS25590;old_locus_tag=C9F04_26465
NZ_PYKF01000815.1	Protein Homology	CDS	172	1119	.	+	0	ID=cds-WP_000593248.1;Parent=gene-C9F04_RS25590;Dbxref=Genbank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9F04_RS25590;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	1335	1898	.	+	.	ID=gene-C9F04_RS25595;Name=C9F04_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25595;old_locus_tag=C9F04_26470
NZ_PYKF01000815.1	Protein Homology	CDS	1335	1898	.	+	0	ID=cds-WP_146713358.1;Parent=gene-C9F04_RS25595;Dbxref=Genbank:WP_146713358.1;Name=WP_146713358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9F04_RS25595;product=YqgE/AlgH family protein;protein_id=WP_146713358.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	1898	2314	.	+	.	ID=gene-C9F04_RS25600;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9F04_RS25600;old_locus_tag=C9F04_26475
NZ_PYKF01000815.1	Protein Homology	CDS	1898	2314	.	+	0	ID=cds-WP_000017096.1;Parent=gene-C9F04_RS25600;Dbxref=Genbank:WP_000017096.1;Name=WP_000017096.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9F04_RS25600;product=Holliday junction resolvase RuvX;protein_id=WP_000017096.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	2361	3047	.	-	.	ID=gene-C9F04_RS25605;Name=C9F04_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25605;old_locus_tag=C9F04_26480
NZ_PYKF01000815.1	Protein Homology	CDS	2361	3047	.	-	0	ID=cds-WP_000098324.1;Parent=gene-C9F04_RS25605;Dbxref=Genbank:WP_000098324.1;Name=WP_000098324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9F04_RS25605;product=IclR family transcriptional regulator;protein_id=WP_000098324.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	3179	4159	.	-	.	ID=gene-C9F04_RS25610;Name=C9F04_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25610;old_locus_tag=C9F04_26485
NZ_PYKF01000815.1	Protein Homology	CDS	3179	4159	.	-	0	ID=cds-WP_146713359.1;Parent=gene-C9F04_RS25610;Dbxref=Genbank:WP_146713359.1;Name=WP_146713359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9F04_RS25610;product=type IV pilus twitching motility protein PilT;protein_id=WP_146713359.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	4177	4881	.	+	.	ID=gene-C9F04_RS25615;Name=C9F04_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25615;old_locus_tag=C9F04_26490
NZ_PYKF01000815.1	Protein Homology	CDS	4177	4881	.	+	0	ID=cds-WP_000997790.1;Parent=gene-C9F04_RS25615;Dbxref=Genbank:WP_000997790.1;Name=WP_000997790.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9F04_RS25615;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997790.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	4900	5466	.	+	.	ID=gene-C9F04_RS25620;Name=C9F04_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25620;old_locus_tag=C9F04_26495
NZ_PYKF01000815.1	Protein Homology	CDS	4900	5466	.	+	0	ID=cds-WP_001094848.1;Parent=gene-C9F04_RS25620;Dbxref=Genbank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9F04_RS25620;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	5463	5753	.	+	.	ID=gene-C9F04_RS25625;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9F04_RS25625;old_locus_tag=C9F04_26500
NZ_PYKF01000815.1	Protein Homology	CDS	5463	5753	.	+	0	ID=cds-WP_001277205.1;Parent=gene-C9F04_RS25625;Dbxref=Genbank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9F04_RS25625;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	5761	6354	.	+	.	ID=gene-C9F04_RS25630;Name=C9F04_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25630;old_locus_tag=C9F04_26505
NZ_PYKF01000815.1	Protein Homology	CDS	5761	6354	.	+	0	ID=cds-WP_001174769.1;Parent=gene-C9F04_RS25630;Dbxref=Genbank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9F04_RS25630;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	6347	7483	.	+	.	ID=gene-C9F04_RS25635;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9F04_RS25635;old_locus_tag=C9F04_26510
NZ_PYKF01000815.1	Protein Homology	CDS	6347	7483	.	+	0	ID=cds-WP_023214414.1;Parent=gene-C9F04_RS25635;Dbxref=Genbank:WP_023214414.1;Name=WP_023214414.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9F04_RS25635;product=radical SAM family heme chaperone HemW;protein_id=WP_023214414.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	7575	8582	.	-	.	ID=gene-C9F04_RS25640;Name=C9F04_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25640;old_locus_tag=C9F04_26515
NZ_PYKF01000815.1	Protein Homology	CDS	7575	8582	.	-	0	ID=cds-WP_000252196.1;Parent=gene-C9F04_RS25640;Dbxref=Genbank:WP_000252196.1;Name=WP_000252196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9F04_RS25640;product=DUF1202 domain-containing protein;protein_id=WP_000252196.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	8715	9761	.	-	.	ID=gene-C9F04_RS25645;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9F04_RS25645;old_locus_tag=C9F04_26520
NZ_PYKF01000815.1	Protein Homology	CDS	8715	9761	.	-	0	ID=cds-WP_146713360.1;Parent=gene-C9F04_RS25645;Dbxref=Genbank:WP_146713360.1;Name=WP_146713360.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9F04_RS25645;product=L-asparaginase 2;protein_id=WP_146713360.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	9950	10669	.	-	.	ID=gene-C9F04_RS25650;Name=C9F04_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25650;old_locus_tag=C9F04_26525
NZ_PYKF01000815.1	Protein Homology	CDS	9950	10669	.	-	0	ID=cds-WP_135369394.1;Parent=gene-C9F04_RS25650;Dbxref=Genbank:WP_135369394.1;Name=WP_135369394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9F04_RS25650;product=DUF2884 domain-containing protein;protein_id=WP_135369394.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	10719	11045	.	-	.	ID=gene-C9F04_RS25655;Name=C9F04_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25655;old_locus_tag=C9F04_26530
NZ_PYKF01000815.1	Protein Homology	CDS	10719	11045	.	-	0	ID=cds-WP_001107574.1;Parent=gene-C9F04_RS25655;Dbxref=Genbank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9F04_RS25655;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	11045	11812	.	-	.	ID=gene-C9F04_RS25660;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9F04_RS25660;old_locus_tag=C9F04_26535
NZ_PYKF01000815.1	Protein Homology	CDS	11045	11812	.	-	0	ID=cds-WP_146713361.1;Parent=gene-C9F04_RS25660;Dbxref=Genbank:WP_146713361.1;Name=WP_146713361.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536034.1;locus_tag=C9F04_RS25660;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_146713361.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	11919	12971	.	+	.	ID=gene-C9F04_RS25665;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9F04_RS25665;old_locus_tag=C9F04_26545
NZ_PYKF01000815.1	Protein Homology	CDS	11919	12971	.	+	0	ID=cds-WP_001148959.1;Parent=gene-C9F04_RS25665;Dbxref=Genbank:WP_001148959.1;Name=WP_001148959.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9F04_RS25665;product=A/G-specific adenine glycosylase;protein_id=WP_001148959.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	12999	13274	.	+	.	ID=gene-C9F04_RS25670;Name=C9F04_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25670;old_locus_tag=C9F04_26550
NZ_PYKF01000815.1	Protein Homology	CDS	12999	13274	.	+	0	ID=cds-WP_000091706.1;Parent=gene-C9F04_RS25670;Dbxref=Genbank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9F04_RS25670;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	13387	14472	.	+	.	ID=gene-C9F04_RS25675;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9F04_RS25675;old_locus_tag=C9F04_26555
NZ_PYKF01000815.1	Protein Homology	CDS	13387	14472	.	+	0	ID=cds-WP_000976289.1;Parent=gene-C9F04_RS25675;Dbxref=Genbank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9F04_RS25675;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	14689	15945	.	+	.	ID=gene-C9F04_RS25680;Name=C9F04_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25680;old_locus_tag=C9F04_26560
NZ_PYKF01000815.1	Protein Homology	CDS	14689	15945	.	+	0	ID=cds-WP_001049804.1;Parent=gene-C9F04_RS25680;Dbxref=Genbank:WP_001049804.1;Name=WP_001049804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9F04_RS25680;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	16007	18142	.	-	.	ID=gene-C9F04_RS25685;Name=C9F04_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25685;old_locus_tag=C9F04_26565
NZ_PYKF01000815.1	Protein Homology	CDS	16007	18142	.	-	0	ID=cds-WP_020899203.1;Parent=gene-C9F04_RS25685;Dbxref=Genbank:WP_020899203.1;Name=WP_020899203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9F04_RS25685;product=ornithine decarboxylase;protein_id=WP_020899203.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	18568	19275	.	+	.	ID=gene-C9F04_RS25690;Name=C9F04_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25690;old_locus_tag=C9F04_26575
NZ_PYKF01000815.1	Protein Homology	CDS	18568	19275	.	+	0	ID=cds-WP_000234466.1;Parent=gene-C9F04_RS25690;Dbxref=Genbank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9F04_RS25690;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11
NZ_PYKF01000815.1	RefSeq	gene	19381	19456	.	+	.	ID=gene-C9F04_RS25695;Name=C9F04_RS25695;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS25695;old_locus_tag=C9F04_26580
NZ_PYKF01000815.1	tRNAscan-SE	tRNA	19381	19456	.	+	.	ID=rna-C9F04_RS25695;Parent=gene-C9F04_RS25695;anticodon=(pos:19414..19416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25695;product=tRNA-Phe
NZ_PYKF01000815.1	tRNAscan-SE	exon	19381	19456	.	+	.	ID=exon-C9F04_RS25695-1;Parent=rna-C9F04_RS25695;anticodon=(pos:19414..19416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25695;product=tRNA-Phe
NZ_PYKF01000815.1	RefSeq	pseudogene	19616	20165	.	+	.	ID=gene-C9F04_RS27285;Name=C9F04_RS27285;end_range=20165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27285;partial=true;pseudo=true
NZ_PYKF01000815.1	Protein Homology	CDS	19616	20165	.	+	0	ID=cds-C9F04_RS27285;Parent=gene-C9F04_RS27285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=C9F04_RS27285;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000219.1 1 6493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000219.1	RefSeq	region	1	6493	.	+	.	ID=NZ_PYKF01000219.1:1..6493;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000219.1	RefSeq	pseudogene	49	1152	.	+	.	ID=gene-C9F04_RS05435;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=C9F04_RS05435;old_locus_tag=C9F04_05610;partial=true;pseudo=true;start_range=.,49
NZ_PYKF01000219.1	Protein Homology	CDS	49	1152	.	+	0	ID=cds-C9F04_RS05435;Parent=gene-C9F04_RS05435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9F04_RS05435;partial=true;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;start_range=.,49;transl_table=11
NZ_PYKF01000219.1	RefSeq	gene	1157	2377	.	+	.	ID=gene-C9F04_RS05440;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9F04_RS05440;old_locus_tag=C9F04_05615
NZ_PYKF01000219.1	Protein Homology	CDS	1157	2377	.	+	0	ID=cds-WP_000187578.1;Parent=gene-C9F04_RS05440;Dbxref=Genbank:WP_000187578.1;Name=WP_000187578.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9F04_RS05440;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11
NZ_PYKF01000219.1	RefSeq	gene	2424	3176	.	+	.	ID=gene-C9F04_RS05445;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9F04_RS05445;old_locus_tag=C9F04_05620
NZ_PYKF01000219.1	Protein Homology	CDS	2424	3176	.	+	0	ID=cds-WP_000153143.1;Parent=gene-C9F04_RS05445;Dbxref=Genbank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9F04_RS05445;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11
NZ_PYKF01000219.1	RefSeq	gene	3466	5130	.	+	.	ID=gene-C9F04_RS05450;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9F04_RS05450;old_locus_tag=C9F04_05625
NZ_PYKF01000219.1	Protein Homology	CDS	3466	5130	.	+	0	ID=cds-WP_146712390.1;Parent=gene-C9F04_RS05450;Dbxref=Genbank:WP_146712390.1;Name=WP_146712390.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9F04_RS05450;product=asparagine synthase B;protein_id=WP_146712390.1;transl_table=11
NZ_PYKF01000219.1	RefSeq	gene	5352	5428	.	+	.	ID=gene-C9F04_RS05455;Name=C9F04_RS05455;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05455;old_locus_tag=C9F04_05630
NZ_PYKF01000219.1	tRNAscan-SE	tRNA	5352	5428	.	+	.	ID=rna-C9F04_RS05455;Parent=gene-C9F04_RS05455;anticodon=(pos:5386..5388);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05455;product=tRNA-Met
NZ_PYKF01000219.1	tRNAscan-SE	exon	5352	5428	.	+	.	ID=exon-C9F04_RS05455-1;Parent=rna-C9F04_RS05455;anticodon=(pos:5386..5388);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05455;product=tRNA-Met
NZ_PYKF01000219.1	RefSeq	gene	5437	5521	.	+	.	ID=gene-C9F04_RS05460;Name=C9F04_RS05460;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05460;old_locus_tag=C9F04_05635
NZ_PYKF01000219.1	tRNAscan-SE	tRNA	5437	5521	.	+	.	ID=rna-C9F04_RS05460;Parent=gene-C9F04_RS05460;anticodon=(pos:5471..5473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05460;product=tRNA-Leu
NZ_PYKF01000219.1	tRNAscan-SE	exon	5437	5521	.	+	.	ID=exon-C9F04_RS05460-1;Parent=rna-C9F04_RS05460;anticodon=(pos:5471..5473);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05460;product=tRNA-Leu
NZ_PYKF01000219.1	RefSeq	gene	5545	5619	.	+	.	ID=gene-C9F04_RS05465;Name=C9F04_RS05465;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05465;old_locus_tag=C9F04_05640
NZ_PYKF01000219.1	tRNAscan-SE	tRNA	5545	5619	.	+	.	ID=rna-C9F04_RS05465;Parent=gene-C9F04_RS05465;anticodon=(pos:5577..5579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05465;product=tRNA-Gln
NZ_PYKF01000219.1	tRNAscan-SE	exon	5545	5619	.	+	.	ID=exon-C9F04_RS05465-1;Parent=rna-C9F04_RS05465;anticodon=(pos:5577..5579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05465;product=tRNA-Gln
NZ_PYKF01000219.1	RefSeq	gene	5635	5711	.	+	.	ID=gene-C9F04_RS05470;Name=C9F04_RS05470;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05470;old_locus_tag=C9F04_05645
NZ_PYKF01000219.1	tRNAscan-SE	tRNA	5635	5711	.	+	.	ID=rna-C9F04_RS05470;Parent=gene-C9F04_RS05470;anticodon=(pos:5669..5671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05470;product=tRNA-Met
NZ_PYKF01000219.1	tRNAscan-SE	exon	5635	5711	.	+	.	ID=exon-C9F04_RS05470-1;Parent=rna-C9F04_RS05470;anticodon=(pos:5669..5671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05470;product=tRNA-Met
NZ_PYKF01000219.1	RefSeq	gene	5758	5832	.	+	.	ID=gene-C9F04_RS05475;Name=C9F04_RS05475;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05475;old_locus_tag=C9F04_05650
NZ_PYKF01000219.1	tRNAscan-SE	tRNA	5758	5832	.	+	.	ID=rna-C9F04_RS05475;Parent=gene-C9F04_RS05475;anticodon=(pos:5790..5792);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05475;product=tRNA-Gln
NZ_PYKF01000219.1	tRNAscan-SE	exon	5758	5832	.	+	.	ID=exon-C9F04_RS05475-1;Parent=rna-C9F04_RS05475;anticodon=(pos:5790..5792);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05475;product=tRNA-Gln
NZ_PYKF01000219.1	RefSeq	gene	5963	6493	.	-	.	ID=gene-C9F04_RS05480;Name=C9F04_RS05480;end_range=6493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05480;old_locus_tag=C9F04_05655;partial=true
NZ_PYKF01000219.1	Protein Homology	CDS	5963	6493	.	-	0	ID=cds-WP_261770749.1;Parent=gene-C9F04_RS05480;Dbxref=Genbank:WP_261770749.1;Name=WP_261770749.1;Ontology_term=GO:0071949;end_range=6493,.;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9F04_RS05480;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_261770749.1;transl_table=11
##sequence-region NZ_PYKF01000462.1 1 6481
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000462.1	RefSeq	region	1	6481	.	+	.	ID=NZ_PYKF01000462.1:1..6481;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000462.1	RefSeq	gene	105	725	.	-	.	ID=gene-C9F04_RS13920;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9F04_RS13920;old_locus_tag=C9F04_14370
NZ_PYKF01000462.1	Protein Homology	CDS	105	725	.	-	0	ID=cds-WP_000142523.1;Parent=gene-C9F04_RS13920;Dbxref=Genbank:WP_000142523.1;Name=WP_000142523.1;Ontology_term=GO:0006865,GO:0016021;gbkey=CDS;gene=rhtB;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9F04_RS13920;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142523.1;transl_table=11
NZ_PYKF01000462.1	RefSeq	gene	836	1852	.	+	.	ID=gene-C9F04_RS13925;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9F04_RS13925;old_locus_tag=C9F04_14375
NZ_PYKF01000462.1	Protein Homology	CDS	836	1852	.	+	0	ID=cds-WP_000487685.1;Parent=gene-C9F04_RS13925;Dbxref=Genbank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9F04_RS13925;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11
NZ_PYKF01000462.1	RefSeq	gene	1868	2668	.	+	.	ID=gene-C9F04_RS13930;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9F04_RS13930;old_locus_tag=C9F04_14380
NZ_PYKF01000462.1	Protein Homology	CDS	1868	2668	.	+	0	ID=cds-WP_000285338.1;Parent=gene-C9F04_RS13930;Dbxref=Genbank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9F04_RS13930;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11
NZ_PYKF01000462.1	RefSeq	gene	2749	3648	.	+	.	ID=gene-C9F04_RS13935;Name=C9F04_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13935;old_locus_tag=C9F04_14385
NZ_PYKF01000462.1	Protein Homology	CDS	2749	3648	.	+	0	ID=cds-WP_001196254.1;Parent=gene-C9F04_RS13935;Dbxref=Genbank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9F04_RS13935;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11
NZ_PYKF01000462.1	RefSeq	gene	3536	4489	.	-	.	ID=gene-C9F04_RS13940;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9F04_RS13940;old_locus_tag=C9F04_14390
NZ_PYKF01000462.1	Protein Homology	CDS	3536	4489	.	-	0	ID=cds-WP_000569786.1;Parent=gene-C9F04_RS13940;Dbxref=Genbank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9F04_RS13940;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11
NZ_PYKF01000462.1	RefSeq	pseudogene	4738	6420	.	+	.	ID=gene-C9F04_RS13945;Name=metE;end_range=6420,.;gbkey=Gene;gene=metE;gene_biotype=pseudogene;locus_tag=C9F04_RS13945;old_locus_tag=C9F04_14395;partial=true;pseudo=true
NZ_PYKF01000462.1	Protein Homology	CDS	4738	6420	.	+	0	ID=cds-C9F04_RS13945;Parent=gene-C9F04_RS13945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;end_range=6420,.;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F04_RS13945;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000269.1 1 6385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000269.1	RefSeq	region	1	6385	.	+	.	ID=NZ_PYKF01000269.1:1..6385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000269.1	RefSeq	gene	1	1376	.	+	.	ID=gene-C9F04_RS07465;Name=C9F04_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07465;old_locus_tag=C9F04_07710;partial=true;start_range=.,1
NZ_PYKF01000269.1	Protein Homology	CDS	1	1376	.	+	2	ID=cds-WP_146712473.1;Parent=gene-C9F04_RS07465;Dbxref=Genbank:WP_146712473.1;Name=WP_146712473.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9F04_RS07465;partial=true;product=sulfatase-like hydrolase/transferase;protein_id=WP_146712473.1;start_range=.,1;transl_table=11
NZ_PYKF01000269.1	RefSeq	gene	1480	2676	.	+	.	ID=gene-C9F04_RS07470;Name=C9F04_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07470;old_locus_tag=C9F04_07715
NZ_PYKF01000269.1	Protein Homology	CDS	1480	2676	.	+	0	ID=cds-WP_001189145.1;Parent=gene-C9F04_RS07470;Dbxref=Genbank:WP_001189145.1;Name=WP_001189145.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9F04_RS07470;product=anaerobic sulfatase maturase;protein_id=WP_001189145.1;transl_table=11
NZ_PYKF01000269.1	RefSeq	gene	2694	3947	.	+	.	ID=gene-C9F04_RS07475;Name=C9F04_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07475;old_locus_tag=C9F04_07720
NZ_PYKF01000269.1	Protein Homology	CDS	2694	3947	.	+	0	ID=cds-WP_000457885.1;Parent=gene-C9F04_RS07475;Dbxref=Genbank:WP_000457885.1;Name=WP_000457885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9F04_RS07475;product=hypothetical protein;protein_id=WP_000457885.1;transl_table=11
NZ_PYKF01000269.1	RefSeq	gene	4066	4323	.	+	.	ID=gene-C9F04_RS26765;Name=C9F04_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26765;old_locus_tag=C9F04_07725
NZ_PYKF01000269.1	Protein Homology	CDS	4066	4323	.	+	0	ID=cds-WP_135369520.1;Parent=gene-C9F04_RS26765;Dbxref=Genbank:WP_135369520.1;Name=WP_135369520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9F04_RS26765;product=aryl sulfotransferase;protein_id=WP_135369520.1;transl_table=11
NZ_PYKF01000269.1	RefSeq	pseudogene	4245	4472	.	+	.	ID=gene-C9F04_RS07485;Name=C9F04_RS07485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07485;old_locus_tag=C9F04_07730;partial=true;pseudo=true;start_range=.,4245
NZ_PYKF01000269.1	Protein Homology	CDS	4245	4472	.	+	0	ID=cds-C9F04_RS07485;Parent=gene-C9F04_RS07485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9F04_RS07485;partial=true;product=arylsulfatase;pseudo=true;start_range=.,4245;transl_table=11
NZ_PYKF01000269.1	RefSeq	gene	4635	5801	.	+	.	ID=gene-C9F04_RS07490;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9F04_RS07490;old_locus_tag=C9F04_07735
NZ_PYKF01000269.1	Protein Homology	CDS	4635	5801	.	+	0	ID=cds-WP_000681340.1;Parent=gene-C9F04_RS07490;Dbxref=Genbank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9F04_RS07490;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11
NZ_PYKF01000269.1	RefSeq	gene	5863	6385	.	+	.	ID=gene-C9F04_RS07495;Name=nhaR;end_range=6385,.;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9F04_RS07495;old_locus_tag=C9F04_07740;partial=true
NZ_PYKF01000269.1	Protein Homology	CDS	5863	6385	.	+	0	ID=cds-WP_146712474.1;Parent=gene-C9F04_RS07495;Dbxref=Genbank:WP_146712474.1;Name=WP_146712474.1;Ontology_term=GO:0006355,GO:0003700;end_range=6385,.;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9F04_RS07495;partial=true;product=transcriptional activator NhaR;protein_id=WP_146712474.1;transl_table=11
##sequence-region NZ_PYKF01000224.1 1 6360
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000224.1	RefSeq	region	1	6360	.	+	.	ID=NZ_PYKF01000224.1:1..6360;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000224.1	RefSeq	gene	1	408	.	+	.	ID=gene-C9F04_RS05720;Name=C9F04_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05720;old_locus_tag=C9F04_05900;partial=true;start_range=.,1
NZ_PYKF01000224.1	Protein Homology	CDS	1	408	.	+	0	ID=cds-WP_186799004.1;Parent=gene-C9F04_RS05720;Dbxref=Genbank:WP_186799004.1;Name=WP_186799004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9F04_RS05720;partial=true;product=YcjX family protein;protein_id=WP_186799004.1;start_range=.,1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	405	1466	.	+	.	ID=gene-C9F04_RS05725;Name=C9F04_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05725;old_locus_tag=C9F04_05905
NZ_PYKF01000224.1	Protein Homology	CDS	405	1466	.	+	0	ID=cds-WP_126479039.1;Parent=gene-C9F04_RS05725;Dbxref=Genbank:WP_126479039.1;Name=WP_126479039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9F04_RS05725;product=YcjF family protein;protein_id=WP_126479039.1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	1614	3155	.	+	.	ID=gene-C9F04_RS05730;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9F04_RS05730;old_locus_tag=C9F04_05910
NZ_PYKF01000224.1	Protein Homology	CDS	1614	3155	.	+	0	ID=cds-WP_146712399.1;Parent=gene-C9F04_RS05730;Dbxref=Genbank:WP_146712399.1;Name=WP_146712399.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9F04_RS05730;product=transcriptional regulator TyrR;protein_id=WP_146712399.1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	3245	3751	.	-	.	ID=gene-C9F04_RS05735;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9F04_RS05735;old_locus_tag=C9F04_05915
NZ_PYKF01000224.1	Protein Homology	CDS	3245	3751	.	-	0	ID=cds-WP_146712400.1;Parent=gene-C9F04_RS05735;Dbxref=Genbank:WP_146712400.1;Name=WP_146712400.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9F04_RS05735;product=thiol peroxidase;protein_id=WP_146712400.1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	3867	4832	.	+	.	ID=gene-C9F04_RS05740;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9F04_RS05740;old_locus_tag=C9F04_05920
NZ_PYKF01000224.1	Protein Homology	CDS	3867	4832	.	+	0	ID=cds-WP_080222203.1;Parent=gene-C9F04_RS05740;Dbxref=Genbank:WP_080222203.1;Name=WP_080222203.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9F04_RS05740;product=L-Ala-D/L-Glu epimerase;protein_id=WP_080222203.1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	4807	5535	.	-	.	ID=gene-C9F04_RS05745;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9F04_RS05745;old_locus_tag=C9F04_05925
NZ_PYKF01000224.1	Protein Homology	CDS	4807	5535	.	-	0	ID=cds-WP_000219108.1;Parent=gene-C9F04_RS05745;Dbxref=Genbank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9F04_RS05745;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11
NZ_PYKF01000224.1	RefSeq	gene	5725	6360	.	+	.	ID=gene-C9F04_RS05750;Name=C9F04_RS05750;end_range=6360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05750;old_locus_tag=C9F04_05930;partial=true
NZ_PYKF01000224.1	Protein Homology	CDS	5725	6360	.	+	0	ID=cds-WP_261770750.1;Parent=gene-C9F04_RS05750;Dbxref=Genbank:WP_261770750.1;Name=WP_261770750.1;end_range=6360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9F04_RS05750;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_261770750.1;transl_table=11
##sequence-region NZ_PYKF01000333.1 1 6338
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000333.1	RefSeq	region	1	6338	.	+	.	ID=NZ_PYKF01000333.1:1..6338;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000333.1	RefSeq	gene	1	2154	.	+	.	ID=gene-C9F04_RS09735;Name=C9F04_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09735;old_locus_tag=C9F04_10045;partial=true;start_range=.,1
NZ_PYKF01000333.1	Protein Homology	CDS	1	2154	.	+	0	ID=cds-WP_146712565.1;Parent=gene-C9F04_RS09735;Dbxref=Genbank:WP_146712565.1;Name=WP_146712565.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F04_RS09735;partial=true;product=type III restriction-modification system endonuclease;protein_id=WP_146712565.1;start_range=.,1;transl_table=11
NZ_PYKF01000333.1	RefSeq	gene	2431	2532	.	+	.	ID=gene-C9F04_RS09740;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9F04_RS09740;old_locus_tag=C9F04_10050
NZ_PYKF01000333.1	Protein Homology	CDS	2431	2532	.	+	0	ID=cds-WP_000934834.1;Parent=gene-C9F04_RS09740;Dbxref=Genbank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9F04_RS09740;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11
NZ_PYKF01000333.1	RefSeq	gene	2649	4052	.	+	.	ID=gene-C9F04_RS09745;Name=C9F04_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09745;old_locus_tag=C9F04_10055
NZ_PYKF01000333.1	Protein Homology	CDS	2649	4052	.	+	0	ID=cds-WP_000393711.1;Parent=gene-C9F04_RS09745;Dbxref=Genbank:WP_000393711.1;Name=WP_000393711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9F04_RS09745;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11
NZ_PYKF01000333.1	RefSeq	gene	4049	5059	.	+	.	ID=gene-C9F04_RS09750;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F04_RS09750;old_locus_tag=C9F04_10060
NZ_PYKF01000333.1	Protein Homology	CDS	4049	5059	.	+	0	ID=cds-WP_000151047.1;Parent=gene-C9F04_RS09750;Dbxref=Genbank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9F04_RS09750;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11
NZ_PYKF01000333.1	RefSeq	gene	5059	5190	.	+	.	ID=gene-C9F04_RS09755;Name=C9F04_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09755;old_locus_tag=C9F04_10065
NZ_PYKF01000333.1	Protein Homology	CDS	5059	5190	.	+	0	ID=cds-WP_000241458.1;Parent=gene-C9F04_RS09755;Dbxref=Genbank:WP_000241458.1;Name=WP_000241458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241460.1;locus_tag=C9F04_RS09755;product=DUF2474 domain-containing protein;protein_id=WP_000241458.1;transl_table=11
NZ_PYKF01000333.1	RefSeq	gene	5396	6338	.	+	.	ID=gene-C9F04_RS09760;Name=C9F04_RS09760;end_range=6338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09760;old_locus_tag=C9F04_10070;partial=true
NZ_PYKF01000333.1	Protein Homology	CDS	5396	6338	.	+	0	ID=cds-WP_146712566.1;Parent=gene-C9F04_RS09760;Dbxref=Genbank:WP_146712566.1;Name=WP_146712566.1;end_range=6338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9F04_RS09760;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_146712566.1;transl_table=11
##sequence-region NZ_PYKF01000510.1 1 6234
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000510.1	RefSeq	region	1	6234	.	+	.	ID=NZ_PYKF01000510.1:1..6234;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000510.1	RefSeq	gene	237	4265	.	-	.	ID=gene-C9F04_RS15280;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9F04_RS15280;old_locus_tag=C9F04_15765
NZ_PYKF01000510.1	Protein Homology	CDS	237	4265	.	-	0	ID=cds-WP_146712836.1;Parent=gene-C9F04_RS15280;Dbxref=Genbank:WP_146712836.1;Name=WP_146712836.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9F04_RS15280;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_146712836.1;transl_table=11
NZ_PYKF01000510.1	RefSeq	gene	4583	4948	.	-	.	ID=gene-C9F04_RS15285;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9F04_RS15285;old_locus_tag=C9F04_15770
NZ_PYKF01000510.1	Protein Homology	CDS	4583	4948	.	-	0	ID=cds-WP_000028882.1;Parent=gene-C9F04_RS15285;Dbxref=Genbank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9F04_RS15285;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11
NZ_PYKF01000510.1	RefSeq	gene	5015	5512	.	-	.	ID=gene-C9F04_RS15290;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9F04_RS15290;old_locus_tag=C9F04_15775
NZ_PYKF01000510.1	Protein Homology	CDS	5015	5512	.	-	0	ID=cds-WP_001207203.1;Parent=gene-C9F04_RS15290;Dbxref=Genbank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9F04_RS15290;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11
NZ_PYKF01000510.1	RefSeq	pseudogene	5932	6234	.	-	.	ID=gene-C9F04_RS15295;Name=rplA;end_range=6234,.;gbkey=Gene;gene=rplA;gene_biotype=pseudogene;locus_tag=C9F04_RS15295;old_locus_tag=C9F04_15785;partial=true;pseudo=true
NZ_PYKF01000510.1	Protein Homology	CDS	5932	6234	.	-	0	ID=cds-C9F04_RS15295;Parent=gene-C9F04_RS15295;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6234,.;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9F04_RS15295;partial=true;product=50S ribosomal protein L1;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000734.1 1 6212
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000734.1	RefSeq	region	1	6212	.	+	.	ID=NZ_PYKF01000734.1:1..6212;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000734.1	RefSeq	gene	1	373	.	+	.	ID=gene-C9F04_RS22750;Name=C9F04_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22750;old_locus_tag=C9F04_23510;partial=true;start_range=.,1
NZ_PYKF01000734.1	Protein Homology	CDS	1	373	.	+	1	ID=cds-WP_186799080.1;Parent=gene-C9F04_RS22750;Dbxref=Genbank:WP_186799080.1;Name=WP_186799080.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9F04_RS22750;partial=true;product=tRNA-dihydrouridine synthase;protein_id=WP_186799080.1;start_range=.,1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	444	641	.	-	.	ID=gene-C9F04_RS27250;Name=C9F04_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27250
NZ_PYKF01000734.1	Protein Homology	CDS	444	641	.	-	0	ID=cds-WP_024135399.1;Parent=gene-C9F04_RS27250;Dbxref=Genbank:WP_024135399.1;Name=WP_024135399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448577.3;locus_tag=C9F04_RS27250;product=hypothetical protein;protein_id=WP_024135399.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	832	2268	.	+	.	ID=gene-C9F04_RS22760;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9F04_RS22760;old_locus_tag=C9F04_23520
NZ_PYKF01000734.1	Protein Homology	CDS	832	2268	.	+	0	ID=cds-WP_135369617.1;Parent=gene-C9F04_RS22760;Dbxref=Genbank:WP_135369617.1;Name=WP_135369617.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9F04_RS22760;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_135369617.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	2334	3095	.	+	.	ID=gene-C9F04_RS22765;Name=C9F04_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22765;old_locus_tag=C9F04_23525
NZ_PYKF01000734.1	Protein Homology	CDS	2334	3095	.	+	0	ID=cds-WP_000169608.1;Parent=gene-C9F04_RS22765;Dbxref=Genbank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9F04_RS22765;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	3143	3712	.	-	.	ID=gene-C9F04_RS22770;Name=C9F04_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22770;old_locus_tag=C9F04_23530
NZ_PYKF01000734.1	Protein Homology	CDS	3143	3712	.	-	0	ID=cds-WP_001523476.1;Parent=gene-C9F04_RS22770;Dbxref=Genbank:WP_001523476.1;Name=WP_001523476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9F04_RS22770;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	3871	4458	.	+	.	ID=gene-C9F04_RS22775;Name=C9F04_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22775;old_locus_tag=C9F04_23535
NZ_PYKF01000734.1	Protein Homology	CDS	3871	4458	.	+	0	ID=cds-WP_001017057.1;Parent=gene-C9F04_RS22775;Dbxref=Genbank:WP_001017057.1;Name=WP_001017057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9F04_RS22775;product=YIP1 family protein;protein_id=WP_001017057.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	gene	4624	5571	.	+	.	ID=gene-C9F04_RS22780;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9F04_RS22780;old_locus_tag=C9F04_23545
NZ_PYKF01000734.1	Protein Homology	CDS	4624	5571	.	+	0	ID=cds-WP_146713221.1;Parent=gene-C9F04_RS22780;Dbxref=Genbank:WP_146713221.1;Name=WP_146713221.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9F04_RS22780;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_146713221.1;transl_table=11
NZ_PYKF01000734.1	RefSeq	pseudogene	5630	6212	.	-	.	ID=gene-C9F04_RS22785;Name=C9F04_RS22785;end_range=6212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22785;old_locus_tag=C9F04_23550;partial=true;pseudo=true
NZ_PYKF01000734.1	Protein Homology	CDS	5630	6212	.	-	1	ID=cds-C9F04_RS22785;Parent=gene-C9F04_RS22785;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9F04_RS22785;partial=true;product=D-lactate dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000437.1 1 6185
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000437.1	RefSeq	region	1	6185	.	+	.	ID=NZ_PYKF01000437.1:1..6185;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000437.1	RefSeq	pseudogene	1	631	.	+	.	ID=gene-C9F04_RS13095;Name=C9F04_RS13095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13095;old_locus_tag=C9F04_13525;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000437.1	Protein Homology	CDS	1	631	.	+	1	ID=cds-C9F04_RS13095;Parent=gene-C9F04_RS13095;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F04_RS13095;partial=true;product=cation transporting ATPase C-terminal domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	720	1106	.	-	.	ID=gene-C9F04_RS13100;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9F04_RS13100;old_locus_tag=C9F04_13530
NZ_PYKF01000437.1	Protein Homology	CDS	720	1106	.	-	0	ID=cds-WP_000047544.1;Parent=gene-C9F04_RS13100;Dbxref=Genbank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9F04_RS13100;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	1183	1644	.	-	.	ID=gene-C9F04_RS13105;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9F04_RS13105;old_locus_tag=C9F04_13535
NZ_PYKF01000437.1	Protein Homology	CDS	1183	1644	.	-	0	ID=cds-WP_000148570.1;Parent=gene-C9F04_RS13105;Dbxref=Genbank:WP_000148570.1;Name=WP_000148570.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9F04_RS13105;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148570.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	1657	2592	.	-	.	ID=gene-C9F04_RS13110;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9F04_RS13110;old_locus_tag=C9F04_13540
NZ_PYKF01000437.1	Protein Homology	CDS	1657	2592	.	-	0	ID=cds-WP_000013055.1;Parent=gene-C9F04_RS13110;Dbxref=Genbank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9F04_RS13110;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	2628	2729	.	-	.	ID=gene-C9F04_RS13115;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=C9F04_RS13115;old_locus_tag=C9F04_13545
NZ_PYKF01000437.1	Protein Homology	CDS	2628	2729	.	-	0	ID=cds-WP_000249504.1;Parent=gene-C9F04_RS13115;Dbxref=Genbank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9F04_RS13115;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	2709	2849	.	+	.	ID=gene-C9F04_RS13120;Name=C9F04_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13120;old_locus_tag=C9F04_13550
NZ_PYKF01000437.1	Protein Homology	CDS	2709	2849	.	+	0	ID=cds-WP_001541415.1;Parent=gene-C9F04_RS13120;Dbxref=Genbank:WP_001541415.1;Name=WP_001541415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9F04_RS13120;product=hypothetical protein;protein_id=WP_001541415.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	2819	3307	.	-	.	ID=gene-C9F04_RS13125;Name=C9F04_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13125;old_locus_tag=C9F04_13555
NZ_PYKF01000437.1	Protein Homology	CDS	2819	3307	.	-	0	ID=cds-WP_000666051.1;Parent=gene-C9F04_RS13125;Dbxref=Genbank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9F04_RS13125;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	3494	4897	.	-	.	ID=gene-C9F04_RS13130;Name=C9F04_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13130;old_locus_tag=C9F04_13560
NZ_PYKF01000437.1	Protein Homology	CDS	3494	4897	.	-	0	ID=cds-WP_000514424.1;Parent=gene-C9F04_RS13130;Dbxref=Genbank:WP_000514424.1;Name=WP_000514424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9F04_RS13130;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11
NZ_PYKF01000437.1	RefSeq	gene	4953	5957	.	-	.	ID=gene-C9F04_RS13135;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F04_RS13135;old_locus_tag=C9F04_13565
NZ_PYKF01000437.1	Protein Homology	CDS	4953	5957	.	-	0	ID=cds-WP_000237031.1;Parent=gene-C9F04_RS13135;Dbxref=Genbank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9F04_RS13135;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11
##sequence-region NZ_PYKF01000663.1 1 6163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000663.1	RefSeq	region	1	6163	.	+	.	ID=NZ_PYKF01000663.1:1..6163;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000663.1	RefSeq	gene	1	919	.	+	.	ID=gene-C9F04_RS20305;Name=C9F04_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20305;old_locus_tag=C9F04_20970;partial=true;start_range=.,1
NZ_PYKF01000663.1	Protein Homology	CDS	1	919	.	+	1	ID=cds-WP_186799063.1;Parent=gene-C9F04_RS20305;Dbxref=Genbank:WP_186799063.1;Name=WP_186799063.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F04_RS20305;partial=true;product=thioesterase domain-containing protein;protein_id=WP_186799063.1;start_range=.,1;transl_table=11
NZ_PYKF01000663.1	RefSeq	gene	1169	2305	.	+	.	ID=gene-C9F04_RS20310;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9F04_RS20310;old_locus_tag=C9F04_20975
NZ_PYKF01000663.1	Protein Homology	CDS	1169	2305	.	+	0	ID=cds-WP_135369278.1;Parent=gene-C9F04_RS20310;Dbxref=Genbank:WP_135369278.1;Name=WP_135369278.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F04_RS20310;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_135369278.1;transl_table=11
NZ_PYKF01000663.1	RefSeq	gene	2358	3152	.	-	.	ID=gene-C9F04_RS20315;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9F04_RS20315;old_locus_tag=C9F04_20980
NZ_PYKF01000663.1	Protein Homology	CDS	2358	3152	.	-	0	ID=cds-WP_146713081.1;Parent=gene-C9F04_RS20315;Dbxref=Genbank:WP_146713081.1;Name=WP_146713081.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9F04_RS20315;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_146713081.1;transl_table=11
NZ_PYKF01000663.1	RefSeq	gene	3149	4138	.	-	.	ID=gene-C9F04_RS20320;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9F04_RS20320;old_locus_tag=C9F04_20985
NZ_PYKF01000663.1	Protein Homology	CDS	3149	4138	.	-	0	ID=cds-WP_000480067.1;Parent=gene-C9F04_RS20320;Dbxref=Genbank:WP_000480067.1;Name=WP_000480067.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9F04_RS20320;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480067.1;transl_table=11
NZ_PYKF01000663.1	RefSeq	gene	4138	5145	.	-	.	ID=gene-C9F04_RS20325;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9F04_RS20325;old_locus_tag=C9F04_20990
NZ_PYKF01000663.1	Protein Homology	CDS	4138	5145	.	-	0	ID=cds-WP_146713082.1;Parent=gene-C9F04_RS20325;Dbxref=Genbank:WP_146713082.1;Name=WP_146713082.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9F04_RS20325;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_146713082.1;transl_table=11
NZ_PYKF01000663.1	RefSeq	gene	5256	6163	.	+	.	ID=gene-C9F04_RS20330;Name=entS;end_range=6163,.;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9F04_RS20330;old_locus_tag=C9F04_20995;partial=true
NZ_PYKF01000663.1	Protein Homology	CDS	5256	6163	.	+	0	ID=cds-WP_146713083.1;Parent=gene-C9F04_RS20330;Dbxref=Genbank:WP_146713083.1;Name=WP_146713083.1;Ontology_term=GO:0042930,GO:0042931;end_range=6163,.;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9F04_RS20330;partial=true;product=enterobactin transporter EntS;protein_id=WP_146713083.1;transl_table=11
##sequence-region NZ_PYKF01000085.1 1 6148
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000085.1	RefSeq	region	1	6148	.	+	.	ID=NZ_PYKF01000085.1:1..6148;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000085.1	RefSeq	gene	1	771	.	+	.	ID=gene-C9F04_RS01670;Name=C9F04_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01670;old_locus_tag=C9F04_01745;partial=true;start_range=.,1
NZ_PYKF01000085.1	Protein Homology	CDS	1	771	.	+	0	ID=cds-WP_146712205.1;Parent=gene-C9F04_RS01670;Dbxref=Genbank:WP_146712205.1;Name=WP_146712205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9F04_RS01670;partial=true;product=PqiA/YebS family transporter subunit;protein_id=WP_146712205.1;start_range=.,1;transl_table=11
NZ_PYKF01000085.1	RefSeq	gene	776	2416	.	+	.	ID=gene-C9F04_RS01675;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9F04_RS01675;old_locus_tag=C9F04_01750
NZ_PYKF01000085.1	Protein Homology	CDS	776	2416	.	+	0	ID=cds-WP_000433414.1;Parent=gene-C9F04_RS01675;Dbxref=Genbank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9F04_RS01675;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11
NZ_PYKF01000085.1	RefSeq	gene	2413	2976	.	+	.	ID=gene-C9F04_RS01680;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9F04_RS01680;old_locus_tag=C9F04_01755
NZ_PYKF01000085.1	Protein Homology	CDS	2413	2976	.	+	0	ID=cds-WP_000759136.1;Parent=gene-C9F04_RS01680;Dbxref=Genbank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9F04_RS01680;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11
NZ_PYKF01000085.1	RefSeq	gene	3232	3399	.	+	.	ID=gene-C9F04_RS01685;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9F04_RS01685;old_locus_tag=C9F04_01760
NZ_PYKF01000085.1	Protein Homology	CDS	3232	3399	.	+	0	ID=cds-WP_001537784.1;Parent=gene-C9F04_RS01685;Dbxref=Genbank:WP_001537784.1;Name=WP_001537784.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9F04_RS01685;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11
NZ_PYKF01000085.1	RefSeq	gene	3499	4017	.	-	.	ID=gene-C9F04_RS01690;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9F04_RS01690;old_locus_tag=C9F04_01765
NZ_PYKF01000085.1	Protein Homology	CDS	3499	4017	.	-	0	ID=cds-WP_000227928.1;Parent=gene-C9F04_RS01690;Dbxref=Genbank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9F04_RS01690;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11
NZ_PYKF01000085.1	RefSeq	pseudogene	4086	5846	.	-	.	ID=gene-C9F04_RS01695;Name=C9F04_RS01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01695;old_locus_tag=C9F04_01770;pseudo=true
NZ_PYKF01000085.1	Protein Homology	CDS	4086	5846	.	-	0	ID=cds-C9F04_RS01695;Parent=gene-C9F04_RS01695;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9F04_RS01695;product=Lon protease family protein;pseudo=true;transl_table=11
NZ_PYKF01000085.1	RefSeq	pseudogene	6032	6148	.	+	.	ID=gene-C9F04_RS01700;Name=C9F04_RS01700;end_range=6148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01700;old_locus_tag=C9F04_01775;partial=true;pseudo=true
NZ_PYKF01000085.1	Protein Homology	CDS	6032	6148	.	+	0	ID=cds-C9F04_RS01700;Parent=gene-C9F04_RS01700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9F04_RS01700;partial=true;product=Ter macrodomain-binding protein MatP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000423.1 1 20162
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000423.1	RefSeq	region	1	20162	.	+	.	ID=NZ_PYKF01000423.1:1..20162;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000423.1	RefSeq	pseudogene	22	387	.	-	.	ID=gene-C9F04_RS12590;Name=C9F04_RS12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12590;old_locus_tag=C9F04_13010;partial=true;pseudo=true;start_range=.,22
NZ_PYKF01000423.1	Protein Homology	CDS	22	387	.	-	0	ID=cds-C9F04_RS12590;Parent=gene-C9F04_RS12590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9F04_RS12590;partial=true;product=L-rhamnose isomerase;pseudo=true;start_range=.,22;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	384	1853	.	-	.	ID=gene-C9F04_RS12595;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9F04_RS12595;old_locus_tag=C9F04_13015
NZ_PYKF01000423.1	Protein Homology	CDS	384	1853	.	-	0	ID=cds-WP_061375796.1;Parent=gene-C9F04_RS12595;Dbxref=Genbank:WP_061375796.1;Name=WP_061375796.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9F04_RS12595;product=rhamnulokinase;protein_id=WP_061375796.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	2141	2977	.	+	.	ID=gene-C9F04_RS12600;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9F04_RS12600;old_locus_tag=C9F04_13020
NZ_PYKF01000423.1	Protein Homology	CDS	2141	2977	.	+	0	ID=cds-WP_146712704.1;Parent=gene-C9F04_RS12600;Dbxref=Genbank:WP_146712704.1;Name=WP_146712704.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9F04_RS12600;product=HTH-type transcriptional activator RhaS;protein_id=WP_146712704.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	3130	3978	.	+	.	ID=gene-C9F04_RS12605;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9F04_RS12605;old_locus_tag=C9F04_13025
NZ_PYKF01000423.1	Protein Homology	CDS	3130	3978	.	+	0	ID=cds-WP_146712705.1;Parent=gene-C9F04_RS12605;Dbxref=Genbank:WP_146712705.1;Name=WP_146712705.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9F04_RS12605;product=HTH-type transcriptional activator RhaR;protein_id=WP_146712705.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	3975	5009	.	-	.	ID=gene-C9F04_RS12610;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9F04_RS12610;old_locus_tag=C9F04_13030
NZ_PYKF01000423.1	Protein Homology	CDS	3975	5009	.	-	0	ID=cds-WP_000063533.1;Parent=gene-C9F04_RS12610;Dbxref=Genbank:WP_000063533.1;Name=WP_000063533.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9F04_RS12610;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063533.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	5628	6311	.	+	.	ID=gene-C9F04_RS12615;Name=C9F04_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12615;old_locus_tag=C9F04_13035
NZ_PYKF01000423.1	Protein Homology	CDS	5628	6311	.	+	0	ID=cds-WP_000378721.1;Parent=gene-C9F04_RS12615;Dbxref=Genbank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9F04_RS12615;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	6469	7776	.	-	.	ID=gene-C9F04_RS12620;Name=C9F04_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12620;old_locus_tag=C9F04_13040
NZ_PYKF01000423.1	Protein Homology	CDS	6469	7776	.	-	0	ID=cds-WP_000566800.1;Parent=gene-C9F04_RS12620;Dbxref=Genbank:WP_000566800.1;Name=WP_000566800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9F04_RS12620;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	7769	8284	.	-	.	ID=gene-C9F04_RS12625;Name=C9F04_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12625;old_locus_tag=C9F04_13045
NZ_PYKF01000423.1	Protein Homology	CDS	7769	8284	.	-	0	ID=cds-WP_001091413.1;Parent=gene-C9F04_RS12625;Dbxref=Genbank:WP_001091413.1;Name=WP_001091413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9F04_RS12625;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	8303	9286	.	-	.	ID=gene-C9F04_RS12630;Name=C9F04_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12630;old_locus_tag=C9F04_13050
NZ_PYKF01000423.1	Protein Homology	CDS	8303	9286	.	-	0	ID=cds-WP_135369581.1;Parent=gene-C9F04_RS12630;Dbxref=Genbank:WP_135369581.1;Name=WP_135369581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9F04_RS12630;product=TRAP transporter substrate-binding protein;protein_id=WP_135369581.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	9615	10235	.	+	.	ID=gene-C9F04_RS12635;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9F04_RS12635;old_locus_tag=C9F04_13055
NZ_PYKF01000423.1	Protein Homology	CDS	9615	10235	.	+	0	ID=cds-WP_006894386.1;Parent=gene-C9F04_RS12635;Dbxref=Genbank:WP_006894386.1;Name=WP_006894386.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9F04_RS12635;product=superoxide dismutase [Mn];protein_id=WP_006894386.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	10305	10994	.	+	.	ID=gene-C9F04_RS12640;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9F04_RS12640;old_locus_tag=C9F04_13060
NZ_PYKF01000423.1	Protein Homology	CDS	10305	10994	.	+	0	ID=cds-WP_186799025.1;Parent=gene-C9F04_RS12640;Dbxref=Genbank:WP_186799025.1;Name=WP_186799025.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9F04_RS12640;product=6-hydroxyaminopurine reductase;protein_id=WP_186799025.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	11006	11401	.	+	.	ID=gene-C9F04_RS12645;Name=C9F04_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12645;old_locus_tag=C9F04_13065
NZ_PYKF01000423.1	Protein Homology	CDS	11006	11401	.	+	0	ID=cds-WP_000133442.1;Parent=gene-C9F04_RS12645;Dbxref=Genbank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9F04_RS12645;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	11522	11725	.	+	.	ID=gene-C9F04_RS12650;Name=C9F04_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12650;old_locus_tag=C9F04_13070
NZ_PYKF01000423.1	Protein Homology	CDS	11522	11725	.	+	0	ID=cds-WP_000338671.1;Parent=gene-C9F04_RS12650;Dbxref=Genbank:WP_000338671.1;Name=WP_000338671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9F04_RS12650;product=hypothetical protein;protein_id=WP_000338671.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	11773	13146	.	-	.	ID=gene-C9F04_RS12655;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9F04_RS12655;old_locus_tag=C9F04_13075
NZ_PYKF01000423.1	Protein Homology	CDS	11773	13146	.	-	0	ID=cds-WP_000580402.1;Parent=gene-C9F04_RS12655;Dbxref=Genbank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9F04_RS12655;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	pseudogene	13143	13841	.	-	.	ID=gene-C9F04_RS12660;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=pseudogene;locus_tag=C9F04_RS12660;old_locus_tag=C9F04_13080;pseudo=true
NZ_PYKF01000423.1	Protein Homology	CDS	13143	13841	.	-	0	ID=cds-C9F04_RS12660;Parent=gene-C9F04_RS12660;Note=internal stop;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9F04_RS12660;product=envelope stress response regulator transcription factor CpxR;pseudo=true;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	13992	14492	.	+	.	ID=gene-C9F04_RS12665;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9F04_RS12665;old_locus_tag=C9F04_13085
NZ_PYKF01000423.1	Protein Homology	CDS	13992	14492	.	+	0	ID=cds-WP_001233463.1;Parent=gene-C9F04_RS12665;Dbxref=Genbank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9F04_RS12665;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	14641	15543	.	+	.	ID=gene-C9F04_RS12670;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9F04_RS12670;old_locus_tag=C9F04_13090
NZ_PYKF01000423.1	Protein Homology	CDS	14641	15543	.	+	0	ID=cds-WP_146712707.1;Parent=gene-C9F04_RS12670;Dbxref=Genbank:WP_146712707.1;Name=WP_146712707.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;gene=fieF;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9F04_RS12670;product=CDF family cation-efflux transporter FieF;protein_id=WP_146712707.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	15728	16690	.	+	.	ID=gene-C9F04_RS12675;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9F04_RS12675;old_locus_tag=C9F04_13095
NZ_PYKF01000423.1	Protein Homology	CDS	15728	16690	.	+	0	ID=cds-WP_000591793.1;Parent=gene-C9F04_RS12675;Dbxref=Genbank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9F04_RS12675;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	16894	17883	.	+	.	ID=gene-C9F04_RS12680;Name=C9F04_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12680;old_locus_tag=C9F04_13100
NZ_PYKF01000423.1	Protein Homology	CDS	16894	17883	.	+	0	ID=cds-WP_146712708.1;Parent=gene-C9F04_RS12680;Dbxref=Genbank:WP_146712708.1;Name=WP_146712708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9F04_RS12680;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_146712708.1;transl_table=11
NZ_PYKF01000423.1	RefSeq	pseudogene	17984	18738	.	+	.	ID=gene-C9F04_RS12685;Name=C9F04_RS12685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12685;old_locus_tag=C9F04_13105;pseudo=true
NZ_PYKF01000423.1	Protein Homology	CDS	17984	18738	.	+	0	ID=cds-C9F04_RS12685;Parent=gene-C9F04_RS12685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9F04_RS12685;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11
NZ_PYKF01000423.1	RefSeq	gene	19002	20162	.	+	.	ID=gene-C9F04_RS12690;Name=C9F04_RS12690;end_range=20162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12690;old_locus_tag=C9F04_13110;partial=true
NZ_PYKF01000423.1	Protein Homology	CDS	19002	20162	.	+	0	ID=cds-WP_146712709.1;Parent=gene-C9F04_RS12690;Dbxref=Genbank:WP_146712709.1;Name=WP_146712709.1;end_range=20162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F04_RS12690;partial=true;product=MFS transporter;protein_id=WP_146712709.1;transl_table=11
##sequence-region NZ_PYKF01000511.1 1 6122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000511.1	RefSeq	region	1	6122	.	+	.	ID=NZ_PYKF01000511.1:1..6122;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000511.1	RefSeq	pseudogene	30	1082	.	+	.	ID=gene-C9F04_RS15300;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=pseudogene;locus_tag=C9F04_RS15300;old_locus_tag=C9F04_15790;partial=true;pseudo=true;start_range=.,30
NZ_PYKF01000511.1	Protein Homology	CDS	30	1082	.	+	0	ID=cds-C9F04_RS15300;Parent=gene-C9F04_RS15300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9F04_RS15300;partial=true;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;pseudo=true;start_range=.,30;transl_table=11
NZ_PYKF01000511.1	RefSeq	gene	1122	3146	.	-	.	ID=gene-C9F04_RS15305;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9F04_RS15305;old_locus_tag=C9F04_15795
NZ_PYKF01000511.1	Protein Homology	CDS	1122	3146	.	-	0	ID=cds-WP_146712838.1;Parent=gene-C9F04_RS15305;Dbxref=Genbank:WP_146712838.1;Name=WP_146712838.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9F04_RS15305;product=DNA helicase Rep;protein_id=WP_146712838.1;transl_table=11
NZ_PYKF01000511.1	RefSeq	pseudogene	3246	3377	.	-	.	ID=gene-C9F04_RS15310;Name=C9F04_RS15310;end_range=3377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15310;old_locus_tag=C9F04_15800;partial=true;pseudo=true
NZ_PYKF01000511.1	Protein Homology	CDS	3246	3377	.	-	0	ID=cds-C9F04_RS15310;Parent=gene-C9F04_RS15310;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968602.1;locus_tag=C9F04_RS15310;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
NZ_PYKF01000511.1	RefSeq	gene	3684	3965	.	+	.	ID=gene-C9F04_RS15320;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9F04_RS15320;old_locus_tag=C9F04_15810
NZ_PYKF01000511.1	Protein Homology	CDS	3684	3965	.	+	0	ID=cds-WP_001096806.1;Parent=gene-C9F04_RS15320;Dbxref=Genbank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9F04_RS15320;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11
NZ_PYKF01000511.1	RefSeq	gene	4057	5532	.	-	.	ID=gene-C9F04_RS15325;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9F04_RS15325;old_locus_tag=C9F04_15815
NZ_PYKF01000511.1	Protein Homology	CDS	4057	5532	.	-	0	ID=cds-WP_135369567.1;Parent=gene-C9F04_RS15325;Dbxref=Genbank:WP_135369567.1;Name=WP_135369567.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9F04_RS15325;product=ketol-acid reductoisomerase;protein_id=WP_135369567.1;transl_table=11
NZ_PYKF01000511.1	RefSeq	pseudogene	5697	6092	.	+	.	ID=gene-C9F04_RS15330;Name=C9F04_RS15330;end_range=6092,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15330;old_locus_tag=C9F04_15820;partial=true;pseudo=true
NZ_PYKF01000511.1	Protein Homology	CDS	5697	6092	.	+	0	ID=cds-C9F04_RS15330;Parent=gene-C9F04_RS15330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;end_range=6092,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9F04_RS15330;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000785.1 1 6070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000785.1	RefSeq	region	1	6070	.	+	.	ID=NZ_PYKF01000785.1:1..6070;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000785.1	RefSeq	gene	1	1011	.	-	.	ID=gene-C9F04_RS24520;Name=C9F04_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24520;old_locus_tag=C9F04_25355;partial=true;start_range=.,1
NZ_PYKF01000785.1	Protein Homology	CDS	1	1011	.	-	0	ID=cds-WP_146713303.1;Parent=gene-C9F04_RS24520;Dbxref=Genbank:WP_146713303.1;Name=WP_146713303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9F04_RS24520;partial=true;product=EAL domain-containing protein;protein_id=WP_146713303.1;start_range=.,1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	1236	1496	.	+	.	ID=gene-C9F04_RS24525;Name=C9F04_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24525;old_locus_tag=C9F04_25360
NZ_PYKF01000785.1	Protein Homology	CDS	1236	1496	.	+	0	ID=cds-WP_000801415.1;Parent=gene-C9F04_RS24525;Dbxref=Genbank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9F04_RS24525;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	1502	1642	.	+	.	ID=gene-C9F04_RS24530;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9F04_RS24530;old_locus_tag=C9F04_25365
NZ_PYKF01000785.1	Protein Homology	CDS	1502	1642	.	+	0	ID=cds-WP_001197749.1;Parent=gene-C9F04_RS24530;Dbxref=Genbank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9F04_RS24530;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	1698	2168	.	-	.	ID=gene-C9F04_RS24535;Name=C9F04_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24535;old_locus_tag=C9F04_25370
NZ_PYKF01000785.1	Protein Homology	CDS	1698	2168	.	-	0	ID=cds-WP_000136183.1;Parent=gene-C9F04_RS24535;Dbxref=Genbank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9F04_RS24535;product=membrane protein;protein_id=WP_000136183.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	2286	2837	.	-	.	ID=gene-C9F04_RS24540;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9F04_RS24540;old_locus_tag=C9F04_25375
NZ_PYKF01000785.1	Protein Homology	CDS	2286	2837	.	-	0	ID=cds-WP_001278793.1;Parent=gene-C9F04_RS24540;Dbxref=Genbank:WP_001278793.1;Name=WP_001278793.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9F04_RS24540;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	3016	3234	.	-	.	ID=gene-C9F04_RS24545;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=C9F04_RS24545;old_locus_tag=C9F04_25380
NZ_PYKF01000785.1	Protein Homology	CDS	3016	3234	.	-	0	ID=cds-WP_001280991.1;Parent=gene-C9F04_RS24545;Dbxref=Genbank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9F04_RS24545;product=hemolysin expression modulator Hha;protein_id=WP_001280991.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	3262	3636	.	-	.	ID=gene-C9F04_RS24550;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9F04_RS24550;old_locus_tag=C9F04_25385
NZ_PYKF01000785.1	Protein Homology	CDS	3262	3636	.	-	0	ID=cds-WP_000344807.1;Parent=gene-C9F04_RS24550;Dbxref=Genbank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9F04_RS24550;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11
NZ_PYKF01000785.1	RefSeq	gene	4132	6070	.	-	.	ID=gene-C9F04_RS24555;Name=C9F04_RS24555;end_range=6070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24555;old_locus_tag=C9F04_25390;partial=true
NZ_PYKF01000785.1	Protein Homology	CDS	4132	6070	.	-	1	ID=cds-WP_146713304.1;Parent=gene-C9F04_RS24555;Dbxref=Genbank:WP_146713304.1;Name=WP_146713304.1;Ontology_term=GO:0006810,GO:0015562,GO:0016021;end_range=6070,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F04_RS24555;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_146713304.1;transl_table=11
##sequence-region NZ_PYKF01000427.1 1 6069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000427.1	RefSeq	region	1	6069	.	+	.	ID=NZ_PYKF01000427.1:1..6069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000427.1	RefSeq	gene	1	264	.	-	.	ID=gene-C9F04_RS12820;Name=C9F04_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12820;old_locus_tag=C9F04_13245;partial=true;start_range=.,1
NZ_PYKF01000427.1	Protein Homology	CDS	1	264	.	-	0	ID=cds-WP_186799026.1;Parent=gene-C9F04_RS12820;Dbxref=Genbank:WP_186799026.1;Name=WP_186799026.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9F04_RS12820;partial=true;product=LysE family transporter;protein_id=WP_186799026.1;start_range=.,1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	328	2157	.	-	.	ID=gene-C9F04_RS12825;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9F04_RS12825;old_locus_tag=C9F04_13250
NZ_PYKF01000427.1	Protein Homology	CDS	328	2157	.	-	0	ID=cds-WP_001533487.1;Parent=gene-C9F04_RS12825;Dbxref=Genbank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9F04_RS12825;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	2241	3110	.	-	.	ID=gene-C9F04_RS12830;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9F04_RS12830;old_locus_tag=C9F04_13255
NZ_PYKF01000427.1	Protein Homology	CDS	2241	3110	.	-	0	ID=cds-WP_001201692.1;Parent=gene-C9F04_RS12830;Dbxref=Genbank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9F04_RS12830;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	3275	3742	.	+	.	ID=gene-C9F04_RS12835;Name=C9F04_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12835;old_locus_tag=C9F04_13260
NZ_PYKF01000427.1	Protein Homology	CDS	3275	3742	.	+	0	ID=cds-WP_001277136.1;Parent=gene-C9F04_RS12835;Dbxref=Genbank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9F04_RS12835;product=thioesterase family protein;protein_id=WP_001277136.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	3786	4673	.	+	.	ID=gene-C9F04_RS12840;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F04_RS12840;old_locus_tag=C9F04_13265
NZ_PYKF01000427.1	Protein Homology	CDS	3786	4673	.	+	0	ID=cds-WP_000339076.1;Parent=gene-C9F04_RS12840;Dbxref=Genbank:WP_000339076.1;Name=WP_000339076.1;Ontology_term=GO:0016021;gbkey=CDS;gene=rarD;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9F04_RS12840;product=EamA family transporter RarD;protein_id=WP_000339076.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	4713	5009	.	-	.	ID=gene-C9F04_RS12845;Name=C9F04_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12845;old_locus_tag=C9F04_13270
NZ_PYKF01000427.1	Protein Homology	CDS	4713	5009	.	-	0	ID=cds-WP_001156607.1;Parent=gene-C9F04_RS12845;Dbxref=Genbank:WP_001156607.1;Name=WP_001156607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9F04_RS12845;product=hypothetical protein;protein_id=WP_001156607.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	5091	5564	.	+	.	ID=gene-C9F04_RS12850;Name=C9F04_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12850;old_locus_tag=C9F04_13275
NZ_PYKF01000427.1	Protein Homology	CDS	5091	5564	.	+	0	ID=cds-WP_223152176.1;Parent=gene-C9F04_RS12850;Dbxref=Genbank:WP_223152176.1;Name=WP_223152176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751908.1;locus_tag=C9F04_RS12850;product=hypothetical protein;protein_id=WP_223152176.1;transl_table=11
NZ_PYKF01000427.1	RefSeq	gene	5612	6069	.	-	.	ID=gene-C9F04_RS12855;Name=corA;end_range=6069,.;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9F04_RS12855;old_locus_tag=C9F04_13280;partial=true
NZ_PYKF01000427.1	Protein Homology	CDS	5612	6069	.	-	2	ID=cds-WP_146712721.1;Parent=gene-C9F04_RS12855;Dbxref=Genbank:WP_146712721.1;Name=WP_146712721.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;end_range=6069,.;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9F04_RS12855;partial=true;product=magnesium/cobalt transporter CorA;protein_id=WP_146712721.1;transl_table=11
##sequence-region NZ_PYKF01000429.1 1 6027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000429.1	RefSeq	region	1	6027	.	+	.	ID=NZ_PYKF01000429.1:1..6027;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000429.1	RefSeq	gene	1	1101	.	-	.	ID=gene-C9F04_RS12890;Name=C9F04_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12890;old_locus_tag=C9F04_13315;partial=true;start_range=.,1
NZ_PYKF01000429.1	Protein Homology	CDS	1	1101	.	-	0	ID=cds-WP_146712723.1;Parent=gene-C9F04_RS12890;Dbxref=Genbank:WP_146712723.1;Name=WP_146712723.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF007365.0;locus_tag=C9F04_RS12890;partial=true;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_146712723.1;start_range=.,1;transl_table=11
NZ_PYKF01000429.1	RefSeq	gene	1453	1551	.	+	.	ID=gene-C9F04_RS12895;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9F04_RS12895;old_locus_tag=C9F04_13320
NZ_PYKF01000429.1	Protein Homology	CDS	1453	1551	.	+	0	ID=cds-WP_001311244.1;Parent=gene-C9F04_RS12895;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9F04_RS12895;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_PYKF01000429.1	RefSeq	gene	1638	1688	.	+	.	ID=gene-C9F04_RS26780;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9F04_RS26780
NZ_PYKF01000429.1	Protein Homology	CDS	1638	1688	.	+	0	ID=cds-WP_192930503.1;Parent=gene-C9F04_RS26780;Dbxref=Genbank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=C9F04_RS26780;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11
NZ_PYKF01000429.1	RefSeq	gene	1691	3337	.	+	.	ID=gene-C9F04_RS12900;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9F04_RS12900;old_locus_tag=C9F04_13325
NZ_PYKF01000429.1	Protein Homology	CDS	1691	3337	.	+	0	ID=cds-WP_001012561.1;Parent=gene-C9F04_RS12900;Dbxref=Genbank:WP_001012561.1;Name=WP_001012561.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9F04_RS12900;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012561.1;transl_table=11
NZ_PYKF01000429.1	RefSeq	gene	3334	3597	.	+	.	ID=gene-C9F04_RS12905;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9F04_RS12905;old_locus_tag=C9F04_13330
NZ_PYKF01000429.1	Protein Homology	CDS	3334	3597	.	+	0	ID=cds-WP_000983260.1;Parent=gene-C9F04_RS12905;Dbxref=Genbank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9F04_RS12905;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11
NZ_PYKF01000429.1	RefSeq	gene	3615	4544	.	+	.	ID=gene-C9F04_RS12910;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9F04_RS12910;old_locus_tag=C9F04_13335
NZ_PYKF01000429.1	Protein Homology	CDS	3615	4544	.	+	0	ID=cds-WP_000208532.1;Parent=gene-C9F04_RS12910;Dbxref=Genbank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9F04_RS12910;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11
NZ_PYKF01000429.1	RefSeq	pseudogene	4704	5978	.	+	.	ID=gene-C9F04_RS12915;Name=ilvD;end_range=5978,.;gbkey=Gene;gene=ilvD;gene_biotype=pseudogene;locus_tag=C9F04_RS12915;old_locus_tag=C9F04_13340;partial=true;pseudo=true
NZ_PYKF01000429.1	Protein Homology	CDS	4704	5978	.	+	0	ID=cds-C9F04_RS12915;Parent=gene-C9F04_RS12915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009082,GO:0004160;end_range=5978,.;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F04_RS12915;partial=true;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000807.1 1 6005
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000807.1	RefSeq	region	1	6005	.	+	.	ID=NZ_PYKF01000807.1:1..6005;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000807.1	RefSeq	pseudogene	1	1022	.	-	.	ID=gene-C9F04_RS25280;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=pseudogene;locus_tag=C9F04_RS25280;old_locus_tag=C9F04_26145;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000807.1	Protein Homology	CDS	1	1022	.	-	0	ID=cds-C9F04_RS25280;Parent=gene-C9F04_RS25280;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9F04_RS25280;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	1025	1522	.	-	.	ID=gene-C9F04_RS25285;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9F04_RS25285;old_locus_tag=C9F04_26150
NZ_PYKF01000807.1	Protein Homology	CDS	1025	1522	.	-	0	ID=cds-WP_000386309.1;Parent=gene-C9F04_RS25285;Dbxref=Genbank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9F04_RS25285;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	1660	2730	.	-	.	ID=gene-C9F04_RS25290;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9F04_RS25290;old_locus_tag=C9F04_26155
NZ_PYKF01000807.1	Protein Homology	CDS	1660	2730	.	-	0	ID=cds-WP_146713343.1;Parent=gene-C9F04_RS25290;Dbxref=Genbank:WP_146713343.1;Name=WP_146713343.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9F04_RS25290;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_146713343.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	2717	3508	.	-	.	ID=gene-C9F04_RS25295;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9F04_RS25295;old_locus_tag=C9F04_26160
NZ_PYKF01000807.1	Protein Homology	CDS	2717	3508	.	-	0	ID=cds-WP_146713344.1;Parent=gene-C9F04_RS25295;Dbxref=Genbank:WP_146713344.1;Name=WP_146713344.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9F04_RS25295;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_146713344.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	3512	3772	.	-	.	ID=gene-C9F04_RS25300;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9F04_RS25300;old_locus_tag=C9F04_26165
NZ_PYKF01000807.1	Protein Homology	CDS	3512	3772	.	-	0	ID=cds-WP_000342503.1;Parent=gene-C9F04_RS25300;Dbxref=Genbank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9F04_RS25300;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	3798	4472	.	-	.	ID=gene-C9F04_RS25305;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9F04_RS25305;old_locus_tag=C9F04_26170
NZ_PYKF01000807.1	Protein Homology	CDS	3798	4472	.	-	0	ID=cds-WP_135369354.1;Parent=gene-C9F04_RS25305;Dbxref=Genbank:WP_135369354.1;Name=WP_135369354.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9F04_RS25305;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_135369354.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	gene	4462	5373	.	-	.	ID=gene-C9F04_RS25310;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9F04_RS25310;old_locus_tag=C9F04_26175
NZ_PYKF01000807.1	Protein Homology	CDS	4462	5373	.	-	0	ID=cds-WP_000058741.1;Parent=gene-C9F04_RS25310;Dbxref=Genbank:WP_000058741.1;Name=WP_000058741.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9F04_RS25310;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058741.1;transl_table=11
NZ_PYKF01000807.1	RefSeq	pseudogene	5373	6005	.	-	.	ID=gene-C9F04_RS25315;Name=spaN;end_range=6005,.;gbkey=Gene;gene=spaN;gene_biotype=pseudogene;gene_synonym=invJ;locus_tag=C9F04_RS25315;old_locus_tag=C9F04_26180;partial=true;pseudo=true
NZ_PYKF01000807.1	Protein Homology	CDS	5373	6005	.	-	0	ID=cds-C9F04_RS25315;Parent=gene-C9F04_RS25315;Note=involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells%3B internal stop%3B incomplete%3B missing N-terminus;end_range=6005,.;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9F04_RS25315;partial=true;product=SPI-1 type III secretion system protein SpaN;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000534.1 1 5976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000534.1	RefSeq	region	1	5976	.	+	.	ID=NZ_PYKF01000534.1:1..5976;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000534.1	RefSeq	pseudogene	1	2013	.	+	.	ID=gene-C9F04_RS15970;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=pseudogene;locus_tag=C9F04_RS15970;old_locus_tag=C9F04_16470;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000534.1	Protein Homology	CDS	1	2013	.	+	0	ID=cds-C9F04_RS15970;Parent=gene-C9F04_RS15970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9F04_RS15970;partial=true;product=salmochelin/enterobactin export ABC transporter IroC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000534.1	RefSeq	gene	2123	3367	.	+	.	ID=gene-C9F04_RS15975;Name=C9F04_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15975;old_locus_tag=C9F04_16475
NZ_PYKF01000534.1	Protein Homology	CDS	2123	3367	.	+	0	ID=cds-WP_135369253.1;Parent=gene-C9F04_RS15975;Dbxref=Genbank:WP_135369253.1;Name=WP_135369253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9F04_RS15975;product=esterase family protein;protein_id=WP_135369253.1;transl_table=11
NZ_PYKF01000534.1	RefSeq	gene	3399	4334	.	+	.	ID=gene-C9F04_RS15980;Name=C9F04_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15980;old_locus_tag=C9F04_16480
NZ_PYKF01000534.1	Protein Homology	CDS	3399	4334	.	+	0	ID=cds-WP_135369252.1;Parent=gene-C9F04_RS15980;Dbxref=Genbank:WP_135369252.1;Name=WP_135369252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9F04_RS15980;product=alpha/beta hydrolase;protein_id=WP_135369252.1;transl_table=11
NZ_PYKF01000534.1	RefSeq	gene	4376	5976	.	-	.	ID=gene-C9F04_RS15985;Name=C9F04_RS15985;end_range=5976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15985;old_locus_tag=C9F04_16485;partial=true
NZ_PYKF01000534.1	Protein Homology	CDS	4376	5976	.	-	2	ID=cds-WP_146712868.1;Parent=gene-C9F04_RS15985;Dbxref=Genbank:WP_146712868.1;Name=WP_146712868.1;Ontology_term=GO:0015891,GO:0015344;end_range=5976,.;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=C9F04_RS15985;partial=true;product=FepA family TonB-dependent siderophore receptor;protein_id=WP_146712868.1;transl_table=11
##sequence-region NZ_PYKF01000426.1 1 5956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000426.1	RefSeq	region	1	5956	.	+	.	ID=NZ_PYKF01000426.1:1..5956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000426.1	RefSeq	gene	1	938	.	+	.	ID=gene-C9F04_RS12795;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=C9F04_RS12795;old_locus_tag=C9F04_13215;partial=true;start_range=.,1
NZ_PYKF01000426.1	Protein Homology	CDS	1	938	.	+	2	ID=cds-WP_146712719.1;Parent=gene-C9F04_RS12795;Dbxref=Genbank:WP_146712719.1;Name=WP_146712719.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9F04_RS12795;partial=true;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_146712719.1;start_range=.,1;transl_table=11
NZ_PYKF01000426.1	RefSeq	gene	1251	2009	.	+	.	ID=gene-C9F04_RS12800;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9F04_RS12800;old_locus_tag=C9F04_13225
NZ_PYKF01000426.1	Protein Homology	CDS	1251	2009	.	+	0	ID=cds-WP_000947413.1;Parent=gene-C9F04_RS12800;Dbxref=Genbank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9F04_RS12800;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11
NZ_PYKF01000426.1	RefSeq	pseudogene	2022	2879	.	+	.	ID=gene-C9F04_RS12805;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=pseudogene;locus_tag=C9F04_RS12805;old_locus_tag=C9F04_13230;pseudo=true
NZ_PYKF01000426.1	Protein Homology	CDS	2022	2879	.	+	0	ID=cds-C9F04_RS12805;Parent=gene-C9F04_RS12805;Note=internal stop;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9F04_RS12805;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11
NZ_PYKF01000426.1	RefSeq	gene	2891	4243	.	+	.	ID=gene-C9F04_RS12810;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9F04_RS12810;old_locus_tag=C9F04_13235
NZ_PYKF01000426.1	Protein Homology	CDS	2891	4243	.	+	0	ID=cds-WP_000949017.1;Parent=gene-C9F04_RS12810;Dbxref=Genbank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9F04_RS12810;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11
NZ_PYKF01000426.1	RefSeq	gene	4275	5956	.	+	.	ID=gene-C9F04_RS12815;Name=bamA;end_range=5956,.;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9F04_RS12815;old_locus_tag=C9F04_13240;partial=true
NZ_PYKF01000426.1	Protein Homology	CDS	4275	5956	.	+	0	ID=cds-WP_146712720.1;Parent=gene-C9F04_RS12815;Dbxref=Genbank:WP_146712720.1;Name=WP_146712720.1;Ontology_term=GO:0009279;end_range=5956,.;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904561.1;locus_tag=C9F04_RS12815;partial=true;product=outer membrane protein assembly factor BamA;protein_id=WP_146712720.1;transl_table=11
##sequence-region NZ_PYKF01000134.1 1 5941
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000134.1	RefSeq	region	1	5941	.	+	.	ID=NZ_PYKF01000134.1:1..5941;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000134.1	RefSeq	pseudogene	1	281	.	+	.	ID=gene-C9F04_RS02710;Name=C9F04_RS02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02710;old_locus_tag=C9F04_02805;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000134.1	Protein Homology	CDS	1	281	.	+	2	ID=cds-C9F04_RS02710;Parent=gene-C9F04_RS02710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=C9F04_RS02710;partial=true;product=E3 ubiquitin--protein ligase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000134.1	RefSeq	pseudogene	381	617	.	+	.	ID=gene-C9F04_RS02715;Name=C9F04_RS02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02715;old_locus_tag=C9F04_02815;partial=true;pseudo=true;start_range=.,381
NZ_PYKF01000134.1	Protein Homology	CDS	381	617	.	+	0	ID=cds-C9F04_RS02715;Parent=gene-C9F04_RS02715;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F04_RS02715;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,381;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	601	1272	.	-	.	ID=gene-C9F04_RS02720;Name=C9F04_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02720;old_locus_tag=C9F04_02820
NZ_PYKF01000134.1	Protein Homology	CDS	601	1272	.	-	0	ID=cds-WP_146712257.1;Parent=gene-C9F04_RS02720;Dbxref=Genbank:WP_146712257.1;Name=WP_146712257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=C9F04_RS02720;product=SOS response-associated peptidase;protein_id=WP_146712257.1;transl_table=11
NZ_PYKF01000134.1	RefSeq	pseudogene	1495	1596	.	-	.	ID=gene-C9F04_RS26885;Name=C9F04_RS26885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26885;partial=true;pseudo=true;start_range=.,1495
NZ_PYKF01000134.1	Protein Homology	CDS	1495	1596	.	-	0	ID=cds-C9F04_RS26885;Parent=gene-C9F04_RS26885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9F04_RS26885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1495;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	1593	2159	.	-	.	ID=gene-C9F04_RS02730;Name=C9F04_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02730;old_locus_tag=C9F04_02830
NZ_PYKF01000134.1	Protein Homology	CDS	1593	2159	.	-	0	ID=cds-WP_024797679.1;Parent=gene-C9F04_RS02730;Dbxref=Genbank:WP_024797679.1;Name=WP_024797679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9F04_RS02730;product=hydrolase;protein_id=WP_024797679.1;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	2484	4256	.	+	.	ID=gene-C9F04_RS02735;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9F04_RS02735;old_locus_tag=C9F04_02835
NZ_PYKF01000134.1	Protein Homology	CDS	2484	4256	.	+	0	ID=cds-WP_146712258.1;Parent=gene-C9F04_RS02735;Dbxref=Genbank:WP_146712258.1;Name=WP_146712258.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9F04_RS02735;product=aspartate--tRNA ligase;protein_id=WP_146712258.1;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	4359	4811	.	+	.	ID=gene-C9F04_RS02740;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9F04_RS02740;old_locus_tag=C9F04_02840
NZ_PYKF01000134.1	Protein Homology	CDS	4359	4811	.	+	0	ID=cds-WP_000653693.1;Parent=gene-C9F04_RS02740;Dbxref=Genbank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9F04_RS02740;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	4841	5581	.	+	.	ID=gene-C9F04_RS02745;Name=C9F04_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02745;old_locus_tag=C9F04_02845
NZ_PYKF01000134.1	Protein Homology	CDS	4841	5581	.	+	0	ID=cds-WP_000907242.1;Parent=gene-C9F04_RS02745;Dbxref=Genbank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9F04_RS02745;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11
NZ_PYKF01000134.1	RefSeq	gene	5618	5941	.	+	.	ID=gene-C9F04_RS02750;Name=ruvC;end_range=5941,.;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9F04_RS02750;old_locus_tag=C9F04_02850;partial=true
NZ_PYKF01000134.1	Protein Homology	CDS	5618	5941	.	+	0	ID=cds-WP_146712259.1;Parent=gene-C9F04_RS02750;Dbxref=Genbank:WP_146712259.1;Name=WP_146712259.1;Ontology_term=GO:0006310,GO:0008821;end_range=5941,.;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227698.1;locus_tag=C9F04_RS02750;partial=true;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_146712259.1;transl_table=11
##sequence-region NZ_PYKF01000654.1 1 5919
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000654.1	RefSeq	region	1	5919	.	+	.	ID=NZ_PYKF01000654.1:1..5919;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000654.1	RefSeq	pseudogene	1	325	.	+	.	ID=gene-C9F04_RS20055;Name=C9F04_RS20055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20055;old_locus_tag=C9F04_20715;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000654.1	Protein Homology	CDS	1	325	.	+	1	ID=cds-C9F04_RS20055;Parent=gene-C9F04_RS20055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271433.1;locus_tag=C9F04_RS20055;partial=true;product=chemotaxis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	325	534	.	+	.	ID=gene-C9F04_RS20060;Name=C9F04_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20060;old_locus_tag=C9F04_20720
NZ_PYKF01000654.1	Protein Homology	CDS	325	534	.	+	0	ID=cds-WP_001269716.1;Parent=gene-C9F04_RS20060;Dbxref=Genbank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9F04_RS20060;product=tail protein X;protein_id=WP_001269716.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	522	1565	.	+	.	ID=gene-C9F04_RS20065;Name=C9F04_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20065;old_locus_tag=C9F04_20725
NZ_PYKF01000654.1	Protein Homology	CDS	522	1565	.	+	0	ID=cds-WP_146713071.1;Parent=gene-C9F04_RS20065;Dbxref=Genbank:WP_146713071.1;Name=WP_146713071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9F04_RS20065;product=phage late control D family protein;protein_id=WP_146713071.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	1575	2297	.	+	.	ID=gene-C9F04_RS20070;Name=C9F04_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20070;old_locus_tag=C9F04_20730
NZ_PYKF01000654.1	Protein Homology	CDS	1575	2297	.	+	0	ID=cds-WP_135369171.1;Parent=gene-C9F04_RS20070;Dbxref=Genbank:WP_135369171.1;Name=WP_135369171.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9F04_RS20070;product=phage baseplate assembly protein V;protein_id=WP_135369171.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	2621	2983	.	+	.	ID=gene-C9F04_RS20080;Name=C9F04_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20080;old_locus_tag=C9F04_20740
NZ_PYKF01000654.1	Protein Homology	CDS	2621	2983	.	+	0	ID=cds-WP_000593184.1;Parent=gene-C9F04_RS20080;Dbxref=Genbank:WP_000593184.1;Name=WP_000593184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9F04_RS20080;product=GtrA family protein;protein_id=WP_000593184.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	2980	3909	.	+	.	ID=gene-C9F04_RS20085;Name=C9F04_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20085;old_locus_tag=C9F04_20745
NZ_PYKF01000654.1	Protein Homology	CDS	2980	3909	.	+	0	ID=cds-WP_023137582.1;Parent=gene-C9F04_RS20085;Dbxref=Genbank:WP_023137582.1;Name=WP_023137582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9F04_RS20085;product=glycosyltransferase family 2 protein;protein_id=WP_023137582.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	3909	5456	.	+	.	ID=gene-C9F04_RS20090;Name=C9F04_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20090;old_locus_tag=C9F04_20750
NZ_PYKF01000654.1	Protein Homology	CDS	3909	5456	.	+	0	ID=cds-WP_079971588.1;Parent=gene-C9F04_RS20090;Dbxref=Genbank:WP_079971588.1;Name=WP_079971588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9F04_RS20090;product=DUF6056 family protein;protein_id=WP_079971588.1;transl_table=11
NZ_PYKF01000654.1	RefSeq	gene	5620	5919	.	+	.	ID=gene-C9F04_RS20095;Name=C9F04_RS20095;end_range=5919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20095;old_locus_tag=C9F04_20755;partial=true
NZ_PYKF01000654.1	Protein Homology	CDS	5620	5919	.	+	0	ID=cds-WP_050953554.1;Parent=gene-C9F04_RS20095;Dbxref=Genbank:WP_050953554.1;Name=WP_050953554.1;end_range=5919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9F04_RS20095;partial=true;product=GPW/gp25 family protein;protein_id=WP_050953554.1;transl_table=11
##sequence-region NZ_PYKF01000787.1 1 5906
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000787.1	RefSeq	region	1	5906	.	+	.	ID=NZ_PYKF01000787.1:1..5906;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000787.1	RefSeq	gene	1	621	.	-	.	ID=gene-C9F04_RS24575;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9F04_RS24575;old_locus_tag=C9F04_25410;partial=true;start_range=.,1
NZ_PYKF01000787.1	Protein Homology	CDS	1	621	.	-	0	ID=cds-WP_146713307.1;Parent=gene-C9F04_RS24575;Dbxref=Genbank:WP_146713307.1;Name=WP_146713307.1;Ontology_term=GO:0008360,GO:0003677,GO:0016021;gbkey=CDS;gene=rodZ;go_component=integral component of membrane|0016021||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9F04_RS24575;partial=true;product=cytoskeleton protein RodZ;protein_id=WP_146713307.1;start_range=.,1;transl_table=11
NZ_PYKF01000787.1	RefSeq	gene	913	2079	.	-	.	ID=gene-C9F04_RS24580;Name=C9F04_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24580;old_locus_tag=C9F04_25420
NZ_PYKF01000787.1	Protein Homology	CDS	913	2079	.	-	0	ID=cds-WP_146713308.1;Parent=gene-C9F04_RS24580;Dbxref=Genbank:WP_146713308.1;Name=WP_146713308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9F04_RS24580;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_146713308.1;transl_table=11
NZ_PYKF01000787.1	RefSeq	gene	2285	2716	.	-	.	ID=gene-C9F04_RS24585;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9F04_RS24585;old_locus_tag=C9F04_25425
NZ_PYKF01000787.1	Protein Homology	CDS	2285	2716	.	-	0	ID=cds-WP_000963846.1;Parent=gene-C9F04_RS24585;Dbxref=Genbank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9F04_RS24585;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11
NZ_PYKF01000787.1	RefSeq	gene	2837	3700	.	-	.	ID=gene-C9F04_RS24590;Name=C9F04_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24590;old_locus_tag=C9F04_25430
NZ_PYKF01000787.1	Protein Homology	CDS	2837	3700	.	-	0	ID=cds-WP_135369742.1;Parent=gene-C9F04_RS24590;Dbxref=Genbank:WP_135369742.1;Name=WP_135369742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9F04_RS24590;product=4Fe-4S binding protein;protein_id=WP_135369742.1;transl_table=11
NZ_PYKF01000787.1	RefSeq	gene	3700	4509	.	-	.	ID=gene-C9F04_RS24595;Name=C9F04_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24595;old_locus_tag=C9F04_25435
NZ_PYKF01000787.1	Protein Homology	CDS	3700	4509	.	-	0	ID=cds-WP_135369743.1;Parent=gene-C9F04_RS24595;Dbxref=Genbank:WP_135369743.1;Name=WP_135369743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9F04_RS24595;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369743.1;transl_table=11
NZ_PYKF01000787.1	RefSeq	gene	4502	5131	.	-	.	ID=gene-C9F04_RS24600;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F04_RS24600;old_locus_tag=C9F04_25440
NZ_PYKF01000787.1	Protein Homology	CDS	4502	5131	.	-	0	ID=cds-WP_135369744.1;Parent=gene-C9F04_RS24600;Dbxref=Genbank:WP_135369744.1;Name=WP_135369744.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9F04_RS24600;product=dimethylsulfoxide reductase subunit B;protein_id=WP_135369744.1;transl_table=11
NZ_PYKF01000787.1	RefSeq	pseudogene	5128	5906	.	-	.	ID=gene-C9F04_RS24605;Name=C9F04_RS24605;end_range=5906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24605;old_locus_tag=C9F04_25445;partial=true;pseudo=true
NZ_PYKF01000787.1	Protein Homology	CDS	5128	5906	.	-	2	ID=cds-C9F04_RS24605;Parent=gene-C9F04_RS24605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F04_RS24605;partial=true;product=dimethyl sulfoxide reductase subunit A;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000679.1 1 19923
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000679.1	RefSeq	region	1	19923	.	+	.	ID=NZ_PYKF01000679.1:1..19923;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000679.1	RefSeq	pseudogene	1	275	.	+	.	ID=gene-C9F04_RS20860;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=pseudogene;locus_tag=C9F04_RS20860;old_locus_tag=C9F04_21530;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000679.1	Protein Homology	CDS	1	275	.	+	2	ID=cds-C9F04_RS20860;Parent=gene-C9F04_RS20860;Note=binds and unfolds substrates as part of the ClpXP protease%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F04_RS20860;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	461	2815	.	+	.	ID=gene-C9F04_RS20865;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9F04_RS20865;old_locus_tag=C9F04_21535
NZ_PYKF01000679.1	Protein Homology	CDS	461	2815	.	+	0	ID=cds-WP_146713111.1;Parent=gene-C9F04_RS20865;Dbxref=Genbank:WP_146713111.1;Name=WP_146713111.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9F04_RS20865;product=endopeptidase La;protein_id=WP_146713111.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	3006	3296	.	+	.	ID=gene-C9F04_RS20870;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9F04_RS20870;old_locus_tag=C9F04_21540
NZ_PYKF01000679.1	Protein Homology	CDS	3006	3296	.	+	0	ID=cds-WP_254888479.1;Parent=gene-C9F04_RS20870;Dbxref=Genbank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9F04_RS20870;product=DNA-binding protein HU-beta;protein_id=WP_254888479.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	3587	5458	.	+	.	ID=gene-C9F04_RS20875;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9F04_RS20875;old_locus_tag=C9F04_21545
NZ_PYKF01000679.1	Protein Homology	CDS	3587	5458	.	+	0	ID=cds-WP_146713112.1;Parent=gene-C9F04_RS20875;Dbxref=Genbank:WP_146713112.1;Name=WP_146713112.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9F04_RS20875;product=peptidylprolyl isomerase;protein_id=WP_146713112.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	5608	5982	.	+	.	ID=gene-C9F04_RS20880;Name=C9F04_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20880;old_locus_tag=C9F04_21550
NZ_PYKF01000679.1	Protein Homology	CDS	5608	5982	.	+	0	ID=cds-WP_000680322.1;Parent=gene-C9F04_RS20880;Dbxref=Genbank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9F04_RS20880;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	6086	6484	.	+	.	ID=gene-C9F04_RS20885;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9F04_RS20885;old_locus_tag=C9F04_21555
NZ_PYKF01000679.1	Protein Homology	CDS	6086	6484	.	+	0	ID=cds-WP_001194543.1;Parent=gene-C9F04_RS20885;Dbxref=Genbank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9F04_RS20885;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	6590	7285	.	-	.	ID=gene-C9F04_RS20890;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9F04_RS20890;old_locus_tag=C9F04_21560
NZ_PYKF01000679.1	Protein Homology	CDS	6590	7285	.	-	0	ID=cds-WP_135369701.1;Parent=gene-C9F04_RS20890;Dbxref=Genbank:WP_135369701.1;Name=WP_135369701.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9F04_RS20890;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_135369701.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	pseudogene	7350	9059	.	-	.	ID=gene-C9F04_RS20895;Name=C9F04_RS20895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20895;old_locus_tag=C9F04_21565;pseudo=true
NZ_PYKF01000679.1	Protein Homology	CDS	7350	9059	.	-	0	ID=cds-C9F04_RS20895;Parent=gene-C9F04_RS20895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238172.1;locus_tag=C9F04_RS20895;product=SgrR family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	9160	9978	.	+	.	ID=gene-C9F04_RS20900;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9F04_RS20900;old_locus_tag=C9F04_21570
NZ_PYKF01000679.1	Protein Homology	CDS	9160	9978	.	+	0	ID=cds-WP_000113030.1;Parent=gene-C9F04_RS20900;Dbxref=Genbank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9F04_RS20900;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	10028	11083	.	-	.	ID=gene-C9F04_RS20905;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9F04_RS20905;old_locus_tag=C9F04_21575
NZ_PYKF01000679.1	Protein Homology	CDS	10028	11083	.	-	0	ID=cds-WP_000987850.1;Parent=gene-C9F04_RS20905;Dbxref=Genbank:WP_000987850.1;Name=WP_000987850.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9F04_RS20905;product=cysteine desulfhydrase;protein_id=WP_000987850.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	11196	11654	.	+	.	ID=gene-C9F04_RS20910;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9F04_RS20910;old_locus_tag=C9F04_21580
NZ_PYKF01000679.1	Protein Homology	CDS	11196	11654	.	+	0	ID=cds-WP_000884593.1;Parent=gene-C9F04_RS20910;Dbxref=Genbank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9F04_RS20910;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	11695	13467	.	+	.	ID=gene-C9F04_RS20915;Name=C9F04_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20915;old_locus_tag=C9F04_21585
NZ_PYKF01000679.1	Protein Homology	CDS	11695	13467	.	+	0	ID=cds-WP_001235559.1;Parent=gene-C9F04_RS20915;Dbxref=Genbank:WP_001235559.1;Name=WP_001235559.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9F04_RS20915;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235559.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	13460	15241	.	+	.	ID=gene-C9F04_RS20920;Name=C9F04_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20920;old_locus_tag=C9F04_21590
NZ_PYKF01000679.1	Protein Homology	CDS	13460	15241	.	+	0	ID=cds-WP_146713113.1;Parent=gene-C9F04_RS20920;Dbxref=Genbank:WP_146713113.1;Name=WP_146713113.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F04_RS20920;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_146713113.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	15454	15792	.	+	.	ID=gene-C9F04_RS20925;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9F04_RS20925;old_locus_tag=C9F04_21595
NZ_PYKF01000679.1	Protein Homology	CDS	15454	15792	.	+	0	ID=cds-WP_000780341.1;Parent=gene-C9F04_RS20925;Dbxref=Genbank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9F04_RS20925;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	15824	17110	.	+	.	ID=gene-C9F04_RS20930;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9F04_RS20930;old_locus_tag=C9F04_21600
NZ_PYKF01000679.1	Protein Homology	CDS	15824	17110	.	+	0	ID=cds-WP_023137940.1;Parent=gene-C9F04_RS20930;Dbxref=Genbank:WP_023137940.1;Name=WP_023137940.1;Ontology_term=GO:0072488,GO:0008519,GO:0005887;gbkey=CDS;gene=amtB;go_component=integral component of plasma membrane|0005887||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9F04_RS20930;product=ammonium transporter AmtB;protein_id=WP_023137940.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	17210	18070	.	-	.	ID=gene-C9F04_RS20935;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9F04_RS20935;old_locus_tag=C9F04_21605
NZ_PYKF01000679.1	Protein Homology	CDS	17210	18070	.	-	0	ID=cds-WP_000084176.1;Parent=gene-C9F04_RS20935;Dbxref=Genbank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9F04_RS20935;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	18285	18854	.	+	.	ID=gene-C9F04_RS20940;Name=C9F04_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20940;old_locus_tag=C9F04_21610
NZ_PYKF01000679.1	Protein Homology	CDS	18285	18854	.	+	0	ID=cds-WP_000779802.1;Parent=gene-C9F04_RS20940;Dbxref=Genbank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9F04_RS20940;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	18887	19276	.	-	.	ID=gene-C9F04_RS20945;Name=C9F04_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20945;old_locus_tag=C9F04_21615
NZ_PYKF01000679.1	Protein Homology	CDS	18887	19276	.	-	0	ID=cds-WP_000961285.1;Parent=gene-C9F04_RS20945;Dbxref=Genbank:WP_000961285.1;Name=WP_000961285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9F04_RS20945;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11
NZ_PYKF01000679.1	RefSeq	gene	19361	19457	.	+	.	ID=gene-C9F04_RS20950;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9F04_RS20950;old_locus_tag=C9F04_21620
NZ_PYKF01000679.1	cmsearch	SRP_RNA	19361	19457	.	+	.	ID=rna-C9F04_RS20950;Parent=gene-C9F04_RS20950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20950;product=signal recognition particle sRNA small type
NZ_PYKF01000679.1	cmsearch	exon	19361	19457	.	+	.	ID=exon-C9F04_RS20950-1;Parent=rna-C9F04_RS20950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20950;product=signal recognition particle sRNA small type
NZ_PYKF01000679.1	RefSeq	gene	19507	19923	.	-	.	ID=gene-C9F04_RS20955;Name=C9F04_RS20955;end_range=19923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20955;old_locus_tag=C9F04_21625;partial=true
NZ_PYKF01000679.1	Protein Homology	CDS	19507	19923	.	-	0	ID=cds-WP_146713114.1;Parent=gene-C9F04_RS20955;Dbxref=Genbank:WP_146713114.1;Name=WP_146713114.1;end_range=19923,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9F04_RS20955;partial=true;product=EAL domain-containing protein;protein_id=WP_146713114.1;transl_table=11
##sequence-region NZ_PYKF01000183.1 1 5849
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000183.1	RefSeq	region	1	5849	.	+	.	ID=NZ_PYKF01000183.1:1..5849;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000183.1	RefSeq	gene	1	1177	.	-	.	ID=gene-C9F04_RS04175;Name=C9F04_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04175;old_locus_tag=C9F04_04320;partial=true;start_range=.,1
NZ_PYKF01000183.1	Protein Homology	CDS	1	1177	.	-	0	ID=cds-WP_261770744.1;Parent=gene-C9F04_RS04175;Dbxref=Genbank:WP_261770744.1;Name=WP_261770744.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9F04_RS04175;partial=true;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_261770744.1;start_range=.,1;transl_table=11
NZ_PYKF01000183.1	RefSeq	gene	1227	2645	.	-	.	ID=gene-C9F04_RS04180;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9F04_RS04180;old_locus_tag=C9F04_04325
NZ_PYKF01000183.1	Protein Homology	CDS	1227	2645	.	-	0	ID=cds-WP_000048817.1;Parent=gene-C9F04_RS04180;Dbxref=Genbank:WP_000048817.1;Name=WP_000048817.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016021;gbkey=CDS;gene=treB;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9F04_RS04180;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048817.1;transl_table=11
NZ_PYKF01000183.1	RefSeq	gene	2783	3730	.	-	.	ID=gene-C9F04_RS04185;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9F04_RS04185;old_locus_tag=C9F04_04330
NZ_PYKF01000183.1	Protein Homology	CDS	2783	3730	.	-	0	ID=cds-WP_001181297.1;Parent=gene-C9F04_RS04185;Dbxref=Genbank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9F04_RS04185;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11
NZ_PYKF01000183.1	RefSeq	gene	4114	5849	.	+	.	ID=gene-C9F04_RS04195;Name=mgtA;end_range=5849,.;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F04_RS04195;old_locus_tag=C9F04_04335;partial=true
NZ_PYKF01000183.1	Protein Homology	CDS	4114	5849	.	+	0	ID=cds-WP_146712323.1;Parent=gene-C9F04_RS04195;Dbxref=Genbank:WP_146712323.1;Name=WP_146712323.1;Ontology_term=GO:0015693,GO:0015444;end_range=5849,.;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F04_RS04195;partial=true;product=magnesium-translocating P-type ATPase;protein_id=WP_146712323.1;transl_table=11
##sequence-region NZ_PYKF01000630.1 1 5832
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000630.1	RefSeq	region	1	5832	.	+	.	ID=NZ_PYKF01000630.1:1..5832;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000630.1	RefSeq	gene	1	574	.	-	.	ID=gene-C9F04_RS19140;Name=C9F04_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19140;old_locus_tag=C9F04_19765;partial=true;start_range=.,1
NZ_PYKF01000630.1	Protein Homology	CDS	1	574	.	-	0	ID=cds-WP_261771385.1;Parent=gene-C9F04_RS19140;Dbxref=Genbank:WP_261771385.1;Name=WP_261771385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011886.0;locus_tag=C9F04_RS19140;partial=true;product=SycD/LcrH family type III secretion system chaperone;protein_id=WP_261771385.1;start_range=.,1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	626	1042	.	-	.	ID=gene-C9F04_RS19145;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9F04_RS19145;old_locus_tag=C9F04_19770
NZ_PYKF01000630.1	Protein Homology	CDS	626	1042	.	-	0	ID=cds-WP_000249606.1;Parent=gene-C9F04_RS19145;Dbxref=Genbank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9F04_RS19145;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	1045	1632	.	-	.	ID=gene-C9F04_RS19150;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9F04_RS19150;old_locus_tag=C9F04_19775
NZ_PYKF01000630.1	Protein Homology	CDS	1045	1632	.	-	0	ID=cds-WP_135369511.1;Parent=gene-C9F04_RS19150;Dbxref=Genbank:WP_135369511.1;Name=WP_135369511.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9F04_RS19150;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_135369511.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	1648	3102	.	-	.	ID=gene-C9F04_RS19155;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9F04_RS19155;old_locus_tag=C9F04_19780
NZ_PYKF01000630.1	Protein Homology	CDS	1648	3102	.	-	0	ID=cds-WP_135369512.1;Parent=gene-C9F04_RS19155;Dbxref=Genbank:WP_135369512.1;Name=WP_135369512.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9F04_RS19155;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_135369512.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	3105	3578	.	-	.	ID=gene-C9F04_RS19160;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9F04_RS19160;old_locus_tag=C9F04_19785
NZ_PYKF01000630.1	Protein Homology	CDS	3105	3578	.	-	0	ID=cds-WP_000711023.1;Parent=gene-C9F04_RS19160;Dbxref=Genbank:WP_000711023.1;Name=WP_000711023.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9F04_RS19160;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711023.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	3575	4165	.	-	.	ID=gene-C9F04_RS19165;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9F04_RS19165;old_locus_tag=C9F04_19790
NZ_PYKF01000630.1	Protein Homology	CDS	3575	4165	.	-	0	ID=cds-WP_146713026.1;Parent=gene-C9F04_RS19165;Dbxref=Genbank:WP_146713026.1;Name=WP_146713026.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9F04_RS19165;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_146713026.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	4172	4498	.	-	.	ID=gene-C9F04_RS19170;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F04_RS19170;old_locus_tag=C9F04_19795
NZ_PYKF01000630.1	Protein Homology	CDS	4172	4498	.	-	0	ID=cds-WP_000972855.1;Parent=gene-C9F04_RS19170;Dbxref=Genbank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9F04_RS19170;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	4762	5004	.	-	.	ID=gene-C9F04_RS19175;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9F04_RS19175;old_locus_tag=C9F04_19800
NZ_PYKF01000630.1	Protein Homology	CDS	4762	5004	.	-	0	ID=cds-WP_080217535.1;Parent=gene-C9F04_RS19175;Dbxref=Genbank:WP_080217535.1;Name=WP_080217535.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9F04_RS19175;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_080217535.1;transl_table=11
NZ_PYKF01000630.1	RefSeq	gene	5012	5832	.	-	.	ID=gene-C9F04_RS19180;Name=ssaD;end_range=5832,.;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9F04_RS19180;old_locus_tag=C9F04_19805;partial=true
NZ_PYKF01000630.1	Protein Homology	CDS	5012	5832	.	-	2	ID=cds-WP_146713027.1;Parent=gene-C9F04_RS19180;Dbxref=Genbank:WP_146713027.1;Name=WP_146713027.1;end_range=5832,.;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9F04_RS19180;partial=true;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_146713027.1;transl_table=11
##sequence-region NZ_PYKF01000068.1 1 5820
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000068.1	RefSeq	region	1	5820	.	+	.	ID=NZ_PYKF01000068.1:1..5820;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000068.1	RefSeq	gene	1	911	.	-	.	ID=gene-C9F04_RS01250;Name=C9F04_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01250;old_locus_tag=C9F04_01320;partial=true;start_range=.,1
NZ_PYKF01000068.1	Protein Homology	CDS	1	911	.	-	0	ID=cds-WP_146712184.1;Parent=gene-C9F04_RS01250;Dbxref=Genbank:WP_146712184.1;Name=WP_146712184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F04_RS01250;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=WP_146712184.1;start_range=.,1;transl_table=11
NZ_PYKF01000068.1	RefSeq	gene	1235	2896	.	-	.	ID=gene-C9F04_RS01255;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9F04_RS01255;old_locus_tag=C9F04_01325
NZ_PYKF01000068.1	Protein Homology	CDS	1235	2896	.	-	0	ID=cds-WP_146712185.1;Parent=gene-C9F04_RS01255;Dbxref=Genbank:WP_146712185.1;Name=WP_146712185.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016021;gbkey=CDS;gene=tsr;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9F04_RS01255;product=methyl-accepting chemotaxis protein;protein_id=WP_146712185.1;transl_table=11
NZ_PYKF01000068.1	RefSeq	gene	3263	5413	.	+	.	ID=gene-C9F04_RS01260;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9F04_RS01260;old_locus_tag=C9F04_01330
NZ_PYKF01000068.1	Protein Homology	CDS	3263	5413	.	+	0	ID=cds-WP_000379929.1;Parent=gene-C9F04_RS01260;Dbxref=Genbank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9F04_RS01260;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11
NZ_PYKF01000068.1	RefSeq	gene	5508	5711	.	+	.	ID=gene-C9F04_RS01265;Name=C9F04_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01265;old_locus_tag=C9F04_01335
NZ_PYKF01000068.1	Protein Homology	CDS	5508	5711	.	+	0	ID=cds-WP_000460616.1;Parent=gene-C9F04_RS01265;Dbxref=Genbank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9F04_RS01265;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11
##sequence-region NZ_PYKF01000524.1 1 5811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000524.1	RefSeq	region	1	5811	.	+	.	ID=NZ_PYKF01000524.1:1..5811;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000524.1	RefSeq	gene	1	466	.	-	.	ID=gene-C9F04_RS15730;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9F04_RS15730;old_locus_tag=C9F04_16220;partial=true;start_range=.,1
NZ_PYKF01000524.1	Protein Homology	CDS	1	466	.	-	0	ID=cds-WP_146712851.1;Parent=gene-C9F04_RS15730;Dbxref=Genbank:WP_146712851.1;Name=WP_146712851.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9F04_RS15730;partial=true;product=SoxR-reducing system protein RseC;protein_id=WP_146712851.1;start_range=.,1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	463	1419	.	-	.	ID=gene-C9F04_RS15735;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9F04_RS15735;old_locus_tag=C9F04_16225
NZ_PYKF01000524.1	Protein Homology	CDS	463	1419	.	-	0	ID=cds-WP_000812021.1;Parent=gene-C9F04_RS15735;Dbxref=Genbank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9F04_RS15735;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	1419	2069	.	-	.	ID=gene-C9F04_RS15740;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9F04_RS15740;old_locus_tag=C9F04_16230
NZ_PYKF01000524.1	Protein Homology	CDS	1419	2069	.	-	0	ID=cds-WP_146712852.1;Parent=gene-C9F04_RS15740;Dbxref=Genbank:WP_146712852.1;Name=WP_146712852.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9F04_RS15740;product=anti-sigma-E factor RseA;protein_id=WP_146712852.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	2101	2676	.	-	.	ID=gene-C9F04_RS15745;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9F04_RS15745;old_locus_tag=C9F04_16235
NZ_PYKF01000524.1	Protein Homology	CDS	2101	2676	.	-	0	ID=cds-WP_000003307.1;Parent=gene-C9F04_RS15745;Dbxref=Genbank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9F04_RS15745;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	2673	2837	.	-	.	ID=gene-C9F04_RS15750;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9F04_RS15750
NZ_PYKF01000524.1	Protein Homology	CDS	2673	2837	.	-	0	ID=cds-WP_014344135.1;Parent=gene-C9F04_RS15750;Dbxref=Genbank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=C9F04_RS15750;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	3101	4723	.	+	.	ID=gene-C9F04_RS15760;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9F04_RS15760;old_locus_tag=C9F04_16245
NZ_PYKF01000524.1	Protein Homology	CDS	3101	4723	.	+	0	ID=cds-WP_146712853.1;Parent=gene-C9F04_RS15760;Dbxref=Genbank:WP_146712853.1;Name=WP_146712853.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9F04_RS15760;product=L-aspartate oxidase;protein_id=WP_146712853.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	4708	5445	.	-	.	ID=gene-C9F04_RS15765;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=C9F04_RS15765;old_locus_tag=C9F04_16250
NZ_PYKF01000524.1	Protein Homology	CDS	4708	5445	.	-	0	ID=cds-WP_146712854.1;Parent=gene-C9F04_RS15765;Dbxref=Genbank:WP_146712854.1;Name=WP_146712854.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9F04_RS15765;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_146712854.1;transl_table=11
NZ_PYKF01000524.1	RefSeq	gene	5576	5811	.	+	.	ID=gene-C9F04_RS15770;Name=C9F04_RS15770;end_range=5811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15770;old_locus_tag=C9F04_16255;partial=true
NZ_PYKF01000524.1	Protein Homology	CDS	5576	5811	.	+	0	ID=cds-WP_146712855.1;Parent=gene-C9F04_RS15770;Dbxref=Genbank:WP_146712855.1;Name=WP_146712855.1;Ontology_term=GO:0003676,GO:0005524;end_range=5811,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9F04_RS15770;partial=true;product=DEAD/DEAH box helicase;protein_id=WP_146712855.1;transl_table=11
##sequence-region NZ_PYKF01000620.1 1 5803
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000620.1	RefSeq	region	1	5803	.	+	.	ID=NZ_PYKF01000620.1:1..5803;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000620.1	RefSeq	gene	1	871	.	+	.	ID=gene-C9F04_RS18750;Name=C9F04_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18750;old_locus_tag=C9F04_19365;partial=true;start_range=.,1
NZ_PYKF01000620.1	Protein Homology	CDS	1	871	.	+	1	ID=cds-WP_146713008.1;Parent=gene-C9F04_RS18750;Dbxref=Genbank:WP_146713008.1;Name=WP_146713008.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F04_RS18750;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_146713008.1;start_range=.,1;transl_table=11
NZ_PYKF01000620.1	RefSeq	pseudogene	1066	1956	.	+	.	ID=gene-C9F04_RS18755;Name=metF;gbkey=Gene;gene=metF;gene_biotype=pseudogene;locus_tag=C9F04_RS18755;old_locus_tag=C9F04_19370;pseudo=true
NZ_PYKF01000620.1	Protein Homology	CDS	1066	1956	.	+	0	ID=cds-C9F04_RS18755;Parent=gene-C9F04_RS18755;Note=internal stop;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9F04_RS18755;product=methylenetetrahydrofolate reductase;pseudo=true;transl_table=11
NZ_PYKF01000620.1	RefSeq	gene	2121	4301	.	+	.	ID=gene-C9F04_RS18760;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9F04_RS18760;old_locus_tag=C9F04_19375
NZ_PYKF01000620.1	Protein Homology	CDS	2121	4301	.	+	0	ID=cds-WP_146713009.1;Parent=gene-C9F04_RS18760;Dbxref=Genbank:WP_146713009.1;Name=WP_146713009.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9F04_RS18760;product=catalase/peroxidase HPI;protein_id=WP_146713009.1;transl_table=11
NZ_PYKF01000620.1	RefSeq	gene	4359	4982	.	-	.	ID=gene-C9F04_RS18765;Name=C9F04_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18765;old_locus_tag=C9F04_19380
NZ_PYKF01000620.1	Protein Homology	CDS	4359	4982	.	-	0	ID=cds-WP_146713010.1;Parent=gene-C9F04_RS18765;Dbxref=Genbank:WP_146713010.1;Name=WP_146713010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9F04_RS18765;product=DUF1287 domain-containing protein;protein_id=WP_146713010.1;transl_table=11
NZ_PYKF01000620.1	RefSeq	pseudogene	5241	5759	.	-	.	ID=gene-C9F04_RS18770;Name=C9F04_RS18770;end_range=5759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18770;old_locus_tag=C9F04_19385;partial=true;pseudo=true
NZ_PYKF01000620.1	Protein Homology	CDS	5241	5759	.	-	0	ID=cds-C9F04_RS18770;Parent=gene-C9F04_RS18770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491,GO:0046872;end_range=5759,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9F04_RS18770;partial=true;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000702.1 1 5798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000702.1	RefSeq	region	1	5798	.	+	.	ID=NZ_PYKF01000702.1:1..5798;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000702.1	RefSeq	gene	1	917	.	+	.	ID=gene-C9F04_RS21825;Name=C9F04_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21825;old_locus_tag=C9F04_22555;partial=true;start_range=.,1
NZ_PYKF01000702.1	Protein Homology	CDS	1	917	.	+	2	ID=cds-WP_186799073.1;Parent=gene-C9F04_RS21825;Dbxref=Genbank:WP_186799073.1;Name=WP_186799073.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9F04_RS21825;partial=true;product=oxidoreductase;protein_id=WP_186799073.1;start_range=.,1;transl_table=11
NZ_PYKF01000702.1	RefSeq	gene	991	1992	.	-	.	ID=gene-C9F04_RS21830;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9F04_RS21830;old_locus_tag=C9F04_22560
NZ_PYKF01000702.1	Protein Homology	CDS	991	1992	.	-	0	ID=cds-WP_146713165.1;Parent=gene-C9F04_RS21830;Dbxref=Genbank:WP_146713165.1;Name=WP_146713165.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=C9F04_RS21830;product=adenosine deaminase;protein_id=WP_146713165.1;transl_table=11
NZ_PYKF01000702.1	RefSeq	pseudogene	2210	2584	.	-	.	ID=gene-C9F04_RS21835;Name=C9F04_RS21835;end_range=2584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21835;old_locus_tag=C9F04_22565;partial=true;pseudo=true
NZ_PYKF01000702.1	Protein Homology	CDS	2210	2584	.	-	0	ID=cds-C9F04_RS21835;Parent=gene-C9F04_RS21835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030170;end_range=2584,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=C9F04_RS21835;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
NZ_PYKF01000702.1	RefSeq	pseudogene	2594	3205	.	+	.	ID=gene-C9F04_RS21840;Name=malI;gbkey=Gene;gene=malI;gene_biotype=pseudogene;locus_tag=C9F04_RS21840;old_locus_tag=C9F04_22570;partial=true;pseudo=true;start_range=.,2594
NZ_PYKF01000702.1	Protein Homology	CDS	2594	3205	.	+	0	ID=cds-C9F04_RS21840;Parent=gene-C9F04_RS21840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=C9F04_RS21840;partial=true;product=Mal regulon transcriptional regulator MalI;pseudo=true;start_range=.,2594;transl_table=11
NZ_PYKF01000702.1	RefSeq	gene	3263	4771	.	-	.	ID=gene-C9F04_RS21845;Name=C9F04_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21845;old_locus_tag=C9F04_22575
NZ_PYKF01000702.1	Protein Homology	CDS	3263	4771	.	-	0	ID=cds-WP_135369664.1;Parent=gene-C9F04_RS21845;Dbxref=Genbank:WP_135369664.1;Name=WP_135369664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9F04_RS21845;product=YdgA family protein;protein_id=WP_135369664.1;transl_table=11
NZ_PYKF01000702.1	RefSeq	gene	4874	5798	.	-	.	ID=gene-C9F04_RS21850;Name=manA;end_range=5798,.;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9F04_RS21850;old_locus_tag=C9F04_22580;partial=true
NZ_PYKF01000702.1	Protein Homology	CDS	4874	5798	.	-	1	ID=cds-WP_146713166.1;Parent=gene-C9F04_RS21850;Dbxref=Genbank:WP_146713166.1;Name=WP_146713166.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;end_range=5798,.;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9F04_RS21850;partial=true;product=mannose-6-phosphate isomerase;protein_id=WP_146713166.1;transl_table=11
##sequence-region NZ_PYKF01000743.1 1 5793
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000743.1	RefSeq	region	1	5793	.	+	.	ID=NZ_PYKF01000743.1:1..5793;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000743.1	RefSeq	gene	1	1031	.	+	.	ID=gene-C9F04_RS23030;Name=C9F04_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23030;old_locus_tag=C9F04_23800;partial=true;start_range=.,1
NZ_PYKF01000743.1	Protein Homology	CDS	1	1031	.	+	2	ID=cds-WP_146713235.1;Parent=gene-C9F04_RS23030;Dbxref=Genbank:WP_146713235.1;Name=WP_146713235.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=C9F04_RS23030;partial=true;product=phage major capsid protein;protein_id=WP_146713235.1;start_range=.,1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	1082	1282	.	+	.	ID=gene-C9F04_RS23035;Name=C9F04_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23035;old_locus_tag=C9F04_23805
NZ_PYKF01000743.1	Protein Homology	CDS	1082	1282	.	+	0	ID=cds-WP_000601353.1;Parent=gene-C9F04_RS23035;Dbxref=Genbank:WP_000601353.1;Name=WP_000601353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=C9F04_RS23035;product=hypothetical protein;protein_id=WP_000601353.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	1285	1608	.	+	.	ID=gene-C9F04_RS23040;Name=C9F04_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23040;old_locus_tag=C9F04_23810
NZ_PYKF01000743.1	Protein Homology	CDS	1285	1608	.	+	0	ID=cds-WP_000927378.1;Parent=gene-C9F04_RS23040;Dbxref=Genbank:WP_000927378.1;Name=WP_000927378.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=C9F04_RS23040;product=head-tail connector protein;protein_id=WP_000927378.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	1605	2009	.	+	.	ID=gene-C9F04_RS23045;Name=C9F04_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23045;old_locus_tag=C9F04_23815
NZ_PYKF01000743.1	Protein Homology	CDS	1605	2009	.	+	0	ID=cds-WP_000702409.1;Parent=gene-C9F04_RS23045;Dbxref=Genbank:WP_000702409.1;Name=WP_000702409.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702408.1;locus_tag=C9F04_RS23045;product=phage head closure protein;protein_id=WP_000702409.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	1981	2493	.	+	.	ID=gene-C9F04_RS23050;Name=C9F04_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23050;old_locus_tag=C9F04_23820
NZ_PYKF01000743.1	Protein Homology	CDS	1981	2493	.	+	0	ID=cds-WP_001135697.1;Parent=gene-C9F04_RS23050;Dbxref=Genbank:WP_001135697.1;Name=WP_001135697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=C9F04_RS23050;product=hypothetical protein;protein_id=WP_001135697.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	2490	3050	.	+	.	ID=gene-C9F04_RS23055;Name=C9F04_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23055;old_locus_tag=C9F04_23825
NZ_PYKF01000743.1	Protein Homology	CDS	2490	3050	.	+	0	ID=cds-WP_146713236.1;Parent=gene-C9F04_RS23055;Dbxref=Genbank:WP_146713236.1;Name=WP_146713236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=C9F04_RS23055;product=hypothetical protein;protein_id=WP_146713236.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	3054	3218	.	+	.	ID=gene-C9F04_RS23060;Name=C9F04_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23060;old_locus_tag=C9F04_23830
NZ_PYKF01000743.1	Protein Homology	CDS	3054	3218	.	+	0	ID=cds-WP_023210465.1;Parent=gene-C9F04_RS23060;Dbxref=Genbank:WP_023210465.1;Name=WP_023210465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=C9F04_RS23060;product=DUF2635 domain-containing protein;protein_id=WP_023210465.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	3208	4704	.	+	.	ID=gene-C9F04_RS23065;Name=C9F04_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23065;old_locus_tag=C9F04_23835
NZ_PYKF01000743.1	Protein Homology	CDS	3208	4704	.	+	0	ID=cds-WP_135369398.1;Parent=gene-C9F04_RS23065;Dbxref=Genbank:WP_135369398.1;Name=WP_135369398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=C9F04_RS23065;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_135369398.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	4704	5060	.	+	.	ID=gene-C9F04_RS23070;Name=C9F04_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23070;old_locus_tag=C9F04_23840
NZ_PYKF01000743.1	Protein Homology	CDS	4704	5060	.	+	0	ID=cds-WP_000515952.1;Parent=gene-C9F04_RS23070;Dbxref=Genbank:WP_000515952.1;Name=WP_000515952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=C9F04_RS23070;product=phage tail tube protein;protein_id=WP_000515952.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	5090	5383	.	+	.	ID=gene-C9F04_RS23075;Name=C9F04_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23075;old_locus_tag=C9F04_23845
NZ_PYKF01000743.1	Protein Homology	CDS	5090	5383	.	+	0	ID=cds-WP_080249853.1;Parent=gene-C9F04_RS23075;Dbxref=Genbank:WP_080249853.1;Name=WP_080249853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574537.1;locus_tag=C9F04_RS23075;product=phage tail protein;protein_id=WP_080249853.1;transl_table=11
NZ_PYKF01000743.1	RefSeq	gene	5468	5793	.	+	.	ID=gene-C9F04_RS23080;Name=C9F04_RS23080;end_range=5793,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23080;old_locus_tag=C9F04_23850;partial=true
NZ_PYKF01000743.1	Protein Homology	CDS	5468	5793	.	+	0	ID=cds-WP_146713237.1;Parent=gene-C9F04_RS23080;Dbxref=Genbank:WP_146713237.1;Name=WP_146713237.1;Ontology_term=GO:0016032,GO:0005198;end_range=5793,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968581.1;locus_tag=C9F04_RS23080;partial=true;product=phage tail tape measure protein;protein_id=WP_146713237.1;transl_table=11
##sequence-region NZ_PYKF01000530.1 1 5792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000530.1	RefSeq	region	1	5792	.	+	.	ID=NZ_PYKF01000530.1:1..5792;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000530.1	RefSeq	gene	1	1879	.	-	.	ID=gene-C9F04_RS15900;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9F04_RS15900;old_locus_tag=C9F04_16390;partial=true;start_range=.,1
NZ_PYKF01000530.1	Protein Homology	CDS	1	1879	.	-	0	ID=cds-WP_261771281.1;Parent=gene-C9F04_RS15900;Dbxref=Genbank:WP_261771281.1;Name=WP_261771281.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F04_RS15900;partial=true;product=type I DNA topoisomerase;protein_id=WP_261771281.1;start_range=.,1;transl_table=11
NZ_PYKF01000530.1	RefSeq	gene	2282	2533	.	+	.	ID=gene-C9F04_RS15905;Name=C9F04_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15905;old_locus_tag=C9F04_16400
NZ_PYKF01000530.1	Protein Homology	CDS	2282	2533	.	+	0	ID=cds-WP_000548616.1;Parent=gene-C9F04_RS15905;Dbxref=Genbank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9F04_RS15905;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11
NZ_PYKF01000530.1	RefSeq	gene	2575	3621	.	-	.	ID=gene-C9F04_RS15910;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9F04_RS15910;old_locus_tag=C9F04_16405
NZ_PYKF01000530.1	Protein Homology	CDS	2575	3621	.	-	0	ID=cds-WP_146712862.1;Parent=gene-C9F04_RS15910;Dbxref=Genbank:WP_146712862.1;Name=WP_146712862.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9F04_RS15910;product=protease SohB;protein_id=WP_146712862.1;transl_table=11
NZ_PYKF01000530.1	RefSeq	gene	3859	4620	.	+	.	ID=gene-C9F04_RS15915;Name=C9F04_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15915;old_locus_tag=C9F04_16410
NZ_PYKF01000530.1	Protein Homology	CDS	3859	4620	.	+	0	ID=cds-WP_000559310.1;Parent=gene-C9F04_RS15915;Dbxref=Genbank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9F04_RS15915;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11
NZ_PYKF01000530.1	RefSeq	gene	4617	5207	.	+	.	ID=gene-C9F04_RS15920;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9F04_RS15920;old_locus_tag=C9F04_16415
NZ_PYKF01000530.1	Protein Homology	CDS	4617	5207	.	+	0	ID=cds-WP_001278865.1;Parent=gene-C9F04_RS15920;Dbxref=Genbank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9F04_RS15920;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11
NZ_PYKF01000530.1	RefSeq	pseudogene	5294	5689	.	-	.	ID=gene-C9F04_RS15925;Name=C9F04_RS15925;end_range=5689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15925;old_locus_tag=C9F04_16420;partial=true;pseudo=true
NZ_PYKF01000530.1	Protein Homology	CDS	5294	5689	.	-	0	ID=cds-C9F04_RS15925;Parent=gene-C9F04_RS15925;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9F04_RS15925;partial=true;product=23S rRNA pseudouridylate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000304.1 1 5791
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000304.1	RefSeq	region	1	5791	.	+	.	ID=NZ_PYKF01000304.1:1..5791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000304.1	RefSeq	gene	1	269	.	+	.	ID=gene-C9F04_RS08930;Name=C9F04_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08930;old_locus_tag=C9F04_09230;partial=true;start_range=.,1
NZ_PYKF01000304.1	Protein Homology	CDS	1	269	.	+	2	ID=cds-WP_261770766.1;Parent=gene-C9F04_RS08930;Dbxref=Genbank:WP_261770766.1;Name=WP_261770766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9F04_RS08930;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_261770766.1;start_range=.,1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	385	1575	.	+	.	ID=gene-C9F04_RS08935;Name=C9F04_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08935;old_locus_tag=C9F04_09235
NZ_PYKF01000304.1	Protein Homology	CDS	385	1575	.	+	0	ID=cds-WP_000154617.1;Parent=gene-C9F04_RS08935;Dbxref=Genbank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9F04_RS08935;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	1622	2287	.	-	.	ID=gene-C9F04_RS08940;Name=C9F04_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08940;old_locus_tag=C9F04_09240
NZ_PYKF01000304.1	Protein Homology	CDS	1622	2287	.	-	0	ID=cds-WP_000968968.1;Parent=gene-C9F04_RS08940;Dbxref=Genbank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9F04_RS08940;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	2546	2980	.	+	.	ID=gene-C9F04_RS08945;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9F04_RS08945;old_locus_tag=C9F04_09245
NZ_PYKF01000304.1	Protein Homology	CDS	2546	2980	.	+	0	ID=cds-WP_000843434.1;Parent=gene-C9F04_RS08945;Dbxref=Genbank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9F04_RS08945;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	3000	3383	.	+	.	ID=gene-C9F04_RS08950;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9F04_RS08950;old_locus_tag=C9F04_09250
NZ_PYKF01000304.1	Protein Homology	CDS	3000	3383	.	+	0	ID=cds-WP_146712519.1;Parent=gene-C9F04_RS08950;Dbxref=Genbank:WP_146712519.1;Name=WP_146712519.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9F04_RS08950;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_146712519.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	3412	3627	.	+	.	ID=gene-C9F04_RS08955;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9F04_RS08955;old_locus_tag=C9F04_09255
NZ_PYKF01000304.1	Protein Homology	CDS	3412	3627	.	+	0	ID=cds-WP_000783049.1;Parent=gene-C9F04_RS08955;Dbxref=Genbank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9F04_RS08955;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	3746	4648	.	-	.	ID=gene-C9F04_RS08960;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9F04_RS08960;old_locus_tag=C9F04_09260
NZ_PYKF01000304.1	Protein Homology	CDS	3746	4648	.	-	0	ID=cds-WP_135369110.1;Parent=gene-C9F04_RS08960;Dbxref=Genbank:WP_135369110.1;Name=WP_135369110.1;Ontology_term=GO:0016021;gbkey=CDS;gene=eamA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9F04_RS08960;product=O-acetylserine/cysteine exporter;protein_id=WP_135369110.1;transl_table=11
NZ_PYKF01000304.1	RefSeq	gene	4876	5791	.	+	.	ID=gene-C9F04_RS08965;Name=C9F04_RS08965;end_range=5791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08965;old_locus_tag=C9F04_09265;partial=true
NZ_PYKF01000304.1	Protein Homology	CDS	4876	5791	.	+	0	ID=cds-WP_146712520.1;Parent=gene-C9F04_RS08965;Dbxref=Genbank:WP_146712520.1;Name=WP_146712520.1;Ontology_term=GO:0055085,GO:0022857;end_range=5791,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832932.1;locus_tag=C9F04_RS08965;partial=true;product=MFS transporter;protein_id=WP_146712520.1;transl_table=11
##sequence-region NZ_PYKF01000451.1 1 5706
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000451.1	RefSeq	region	1	5706	.	+	.	ID=NZ_PYKF01000451.1:1..5706;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000451.1	RefSeq	gene	31	420	.	-	.	ID=gene-C9F04_RS13575;Name=C9F04_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13575;old_locus_tag=C9F04_14020
NZ_PYKF01000451.1	Protein Homology	CDS	31	420	.	-	0	ID=cds-WP_000876817.1;Parent=gene-C9F04_RS13575;Dbxref=Genbank:WP_000876817.1;Name=WP_000876817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9F04_RS13575;product=helix-turn-helix transcriptional regulator;protein_id=WP_000876817.1;transl_table=11
NZ_PYKF01000451.1	RefSeq	gene	425	1792	.	-	.	ID=gene-C9F04_RS13580;Name=C9F04_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13580;old_locus_tag=C9F04_14025
NZ_PYKF01000451.1	Protein Homology	CDS	425	1792	.	-	0	ID=cds-WP_103133245.1;Parent=gene-C9F04_RS13580;Dbxref=Genbank:WP_103133245.1;Name=WP_103133245.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9F04_RS13580;product=L-serine ammonia-lyase;protein_id=WP_103133245.1;transl_table=11
NZ_PYKF01000451.1	RefSeq	gene	2009	2896	.	+	.	ID=gene-C9F04_RS13585;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F04_RS13585;old_locus_tag=C9F04_14030
NZ_PYKF01000451.1	Protein Homology	CDS	2009	2896	.	+	0	ID=cds-WP_058108583.1;Parent=gene-C9F04_RS13585;Dbxref=Genbank:WP_058108583.1;Name=WP_058108583.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9F04_RS13585;product=phosphoserine phosphatase SerB;protein_id=WP_058108583.1;transl_table=11
NZ_PYKF01000451.1	RefSeq	gene	2929	4251	.	+	.	ID=gene-C9F04_RS13590;Name=C9F04_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13590;old_locus_tag=C9F04_14035
NZ_PYKF01000451.1	Protein Homology	CDS	2929	4251	.	+	0	ID=cds-WP_146712758.1;Parent=gene-C9F04_RS13590;Dbxref=Genbank:WP_146712758.1;Name=WP_146712758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9F04_RS13590;product=MFS transporter;protein_id=WP_146712758.1;transl_table=11
NZ_PYKF01000451.1	RefSeq	gene	4295	5706	.	-	.	ID=gene-C9F04_RS13595;Name=cirA;end_range=5706,.;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9F04_RS13595;old_locus_tag=C9F04_14040;partial=true
NZ_PYKF01000451.1	Protein Homology	CDS	4295	5706	.	-	2	ID=cds-WP_146712759.1;Parent=gene-C9F04_RS13595;Dbxref=Genbank:WP_146712759.1;Name=WP_146712759.1;end_range=5706,.;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9F04_RS13595;partial=true;product=catecholate siderophore receptor CirA;protein_id=WP_146712759.1;transl_table=11
##sequence-region NZ_PYKF01000331.1 1 19798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000331.1	RefSeq	region	1	19798	.	+	.	ID=NZ_PYKF01000331.1:1..19798;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000331.1	RefSeq	gene	177	869	.	+	.	ID=gene-C9F04_RS09615;Name=C9F04_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09615;old_locus_tag=C9F04_09925
NZ_PYKF01000331.1	Protein Homology	CDS	177	869	.	+	0	ID=cds-WP_000642866.1;Parent=gene-C9F04_RS09615;Dbxref=Genbank:WP_000642866.1;Name=WP_000642866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9F04_RS09615;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	1055	2143	.	+	.	ID=gene-C9F04_RS09620;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9F04_RS09620;old_locus_tag=C9F04_09930
NZ_PYKF01000331.1	Protein Homology	CDS	1055	2143	.	+	0	ID=cds-WP_146712558.1;Parent=gene-C9F04_RS09620;Dbxref=Genbank:WP_146712558.1;Name=WP_146712558.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9F04_RS09620;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_146712558.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	2214	3497	.	+	.	ID=gene-C9F04_RS09625;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9F04_RS09625;old_locus_tag=C9F04_09935
NZ_PYKF01000331.1	Protein Homology	CDS	2214	3497	.	+	0	ID=cds-WP_135369411.1;Parent=gene-C9F04_RS09625;Dbxref=Genbank:WP_135369411.1;Name=WP_135369411.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9F04_RS09625;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_135369411.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	3640	4401	.	+	.	ID=gene-C9F04_RS09630;Name=C9F04_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09630;old_locus_tag=C9F04_09940
NZ_PYKF01000331.1	Protein Homology	CDS	3640	4401	.	+	0	ID=cds-WP_135369650.1;Parent=gene-C9F04_RS09630;Dbxref=Genbank:WP_135369650.1;Name=WP_135369650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9F04_RS09630;product=M48 family metallopeptidase;protein_id=WP_135369650.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	4574	5257	.	+	.	ID=gene-C9F04_RS09635;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9F04_RS09635;old_locus_tag=C9F04_09945
NZ_PYKF01000331.1	Protein Homology	CDS	4574	5257	.	+	0	ID=cds-WP_146712559.1;Parent=gene-C9F04_RS09635;Dbxref=Genbank:WP_146712559.1;Name=WP_146712559.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9F04_RS09635;product=(d)CMP kinase;protein_id=WP_146712559.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	5371	7044	.	+	.	ID=gene-C9F04_RS09640;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9F04_RS09640;old_locus_tag=C9F04_09950
NZ_PYKF01000331.1	Protein Homology	CDS	5371	7044	.	+	0	ID=cds-WP_000140324.1;Parent=gene-C9F04_RS09640;Dbxref=Genbank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9F04_RS09640;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	7200	7484	.	+	.	ID=gene-C9F04_RS09645;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9F04_RS09645;old_locus_tag=C9F04_09955
NZ_PYKF01000331.1	Protein Homology	CDS	7200	7484	.	+	0	ID=cds-WP_000167332.1;Parent=gene-C9F04_RS09645;Dbxref=Genbank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9F04_RS09645;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	7714	9978	.	+	.	ID=gene-C9F04_RS09650;Name=C9F04_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09650;old_locus_tag=C9F04_09960
NZ_PYKF01000331.1	Protein Homology	CDS	7714	9978	.	+	0	ID=cds-WP_135369651.1;Parent=gene-C9F04_RS09650;Dbxref=Genbank:WP_135369651.1;Name=WP_135369651.1;Ontology_term=GO:0030420,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9F04_RS09650;product=ComEC family protein;protein_id=WP_135369651.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	10015	11763	.	+	.	ID=gene-C9F04_RS09655;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9F04_RS09655;old_locus_tag=C9F04_09965
NZ_PYKF01000331.1	Protein Homology	CDS	10015	11763	.	+	0	ID=cds-WP_000551246.1;Parent=gene-C9F04_RS09655;Dbxref=Genbank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016021;gbkey=CDS;gene=msbA;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9F04_RS09655;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	11760	12737	.	+	.	ID=gene-C9F04_RS09660;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9F04_RS09660;old_locus_tag=C9F04_09970
NZ_PYKF01000331.1	Protein Homology	CDS	11760	12737	.	+	0	ID=cds-WP_146712560.1;Parent=gene-C9F04_RS09660;Dbxref=Genbank:WP_146712560.1;Name=WP_146712560.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9F04_RS09660;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_146712560.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	12781	14013	.	+	.	ID=gene-C9F04_RS09665;Name=C9F04_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09665;old_locus_tag=C9F04_09975
NZ_PYKF01000331.1	Protein Homology	CDS	12781	14013	.	+	0	ID=cds-WP_135369652.1;Parent=gene-C9F04_RS09665;Dbxref=Genbank:WP_135369652.1;Name=WP_135369652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9F04_RS09665;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369652.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	14065	14247	.	+	.	ID=gene-C9F04_RS09670;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9F04_RS09670;old_locus_tag=C9F04_09980
NZ_PYKF01000331.1	Protein Homology	CDS	14065	14247	.	+	0	ID=cds-WP_000350061.1;Parent=gene-C9F04_RS09670;Dbxref=Genbank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9F04_RS09670;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	14244	14990	.	+	.	ID=gene-C9F04_RS09675;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9F04_RS09675;old_locus_tag=C9F04_09985
NZ_PYKF01000331.1	Protein Homology	CDS	14244	14990	.	+	0	ID=cds-WP_079841760.1;Parent=gene-C9F04_RS09675;Dbxref=Genbank:WP_079841760.1;Name=WP_079841760.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9F04_RS09675;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_079841760.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	15201	16094	.	+	.	ID=gene-C9F04_RS09680;Name=C9F04_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09680;old_locus_tag=C9F04_09990
NZ_PYKF01000331.1	Protein Homology	CDS	15201	16094	.	+	0	ID=cds-WP_000436894.1;Parent=gene-C9F04_RS09680;Dbxref=Genbank:WP_000436894.1;Name=WP_000436894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9F04_RS09680;product=YcbJ family phosphotransferase;protein_id=WP_000436894.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	16074	16850	.	-	.	ID=gene-C9F04_RS09685;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9F04_RS09685;old_locus_tag=C9F04_09995
NZ_PYKF01000331.1	Protein Homology	CDS	16074	16850	.	-	0	ID=cds-WP_000899554.1;Parent=gene-C9F04_RS09685;Dbxref=Genbank:WP_000899554.1;Name=WP_000899554.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9F04_RS09685;product=envelope biogenesis factor ElyC;protein_id=WP_000899554.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	16986	17789	.	+	.	ID=gene-C9F04_RS09690;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9F04_RS09690;old_locus_tag=C9F04_10000
NZ_PYKF01000331.1	Protein Homology	CDS	16986	17789	.	+	0	ID=cds-WP_080220669.1;Parent=gene-C9F04_RS09690;Dbxref=Genbank:WP_080220669.1;Name=WP_080220669.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9F04_RS09690;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_080220669.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	17782	19104	.	+	.	ID=gene-C9F04_RS09695;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9F04_RS09695;old_locus_tag=C9F04_10005
NZ_PYKF01000331.1	Protein Homology	CDS	17782	19104	.	+	0	ID=cds-WP_001288828.1;Parent=gene-C9F04_RS09695;Dbxref=Genbank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F04_RS09695;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11
NZ_PYKF01000331.1	RefSeq	gene	19085	19792	.	+	.	ID=gene-C9F04_RS09700;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9F04_RS09700;old_locus_tag=C9F04_10010
NZ_PYKF01000331.1	Protein Homology	CDS	19085	19792	.	+	0	ID=cds-WP_146712561.1;Parent=gene-C9F04_RS09700;Dbxref=Genbank:WP_146712561.1;Name=WP_146712561.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9F04_RS09700;product=chromosome partition protein MukE;protein_id=WP_146712561.1;transl_table=11
##sequence-region NZ_PYKF01000498.1 1 37752
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000498.1	RefSeq	region	1	37752	.	+	.	ID=NZ_PYKF01000498.1:1..37752;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000498.1	RefSeq	pseudogene	9	1214	.	+	.	ID=gene-C9F04_RS14760;Name=C9F04_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14760;old_locus_tag=C9F04_15245;partial=true;pseudo=true;start_range=.,9
NZ_PYKF01000498.1	Protein Homology	CDS	9	1214	.	+	0	ID=cds-C9F04_RS14760;Parent=gene-C9F04_RS14760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F04_RS14760;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	1219	1938	.	+	.	ID=gene-C9F04_RS14765;Name=C9F04_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14765;old_locus_tag=C9F04_15250
NZ_PYKF01000498.1	Protein Homology	CDS	1219	1938	.	+	0	ID=cds-WP_135369542.1;Parent=gene-C9F04_RS14765;Dbxref=Genbank:WP_135369542.1;Name=WP_135369542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=C9F04_RS14765;product=tetratricopeptide repeat protein;protein_id=WP_135369542.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	2069	2806	.	-	.	ID=gene-C9F04_RS14770;Name=C9F04_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14770;old_locus_tag=C9F04_15255
NZ_PYKF01000498.1	Protein Homology	CDS	2069	2806	.	-	0	ID=cds-WP_135420194.1;Parent=gene-C9F04_RS14770;Dbxref=Genbank:WP_135420194.1;Name=WP_135420194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497704.1;locus_tag=C9F04_RS14770;product=hypothetical protein;protein_id=WP_135420194.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	pseudogene	2928	3122	.	-	.	ID=gene-C9F04_RS27070;Name=C9F04_RS27070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27070;old_locus_tag=C9F04_15260;partial=true;pseudo=true;start_range=.,2928
NZ_PYKF01000498.1	Protein Homology	CDS	2928	3122	.	-	0	ID=cds-C9F04_RS27070;Parent=gene-C9F04_RS27070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=C9F04_RS27070;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,2928;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	3261	3758	.	-	.	ID=gene-C9F04_RS14780;Name=C9F04_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14780;old_locus_tag=C9F04_15265
NZ_PYKF01000498.1	Protein Homology	CDS	3261	3758	.	-	0	ID=cds-WP_057935541.1;Parent=gene-C9F04_RS14780;Dbxref=Genbank:WP_057935541.1;Name=WP_057935541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037626.1;locus_tag=C9F04_RS14780;product=hypothetical protein;protein_id=WP_057935541.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	3953	4330	.	-	.	ID=gene-C9F04_RS14785;Name=C9F04_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14785;old_locus_tag=C9F04_15270
NZ_PYKF01000498.1	Protein Homology	CDS	3953	4330	.	-	0	ID=cds-WP_061380351.1;Parent=gene-C9F04_RS14785;Dbxref=Genbank:WP_061380351.1;Name=WP_061380351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357876.1;locus_tag=C9F04_RS14785;product=hypothetical protein;protein_id=WP_061380351.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	4699	5073	.	-	.	ID=gene-C9F04_RS14790;Name=C9F04_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14790;old_locus_tag=C9F04_15275
NZ_PYKF01000498.1	Protein Homology	CDS	4699	5073	.	-	0	ID=cds-WP_057935550.1;Parent=gene-C9F04_RS14790;Dbxref=Genbank:WP_057935550.1;Name=WP_057935550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213035.1;locus_tag=C9F04_RS14790;product=sel1 repeat family protein;protein_id=WP_057935550.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	5338	6204	.	-	.	ID=gene-C9F04_RS14795;Name=C9F04_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14795;old_locus_tag=C9F04_15280
NZ_PYKF01000498.1	Protein Homology	CDS	5338	6204	.	-	0	ID=cds-WP_063809102.1;Parent=gene-C9F04_RS14795;Dbxref=Genbank:WP_063809102.1;Name=WP_063809102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864146.1;locus_tag=C9F04_RS14795;product=HEAT repeat domain-containing protein;protein_id=WP_063809102.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	pseudogene	6417	6647	.	-	.	ID=gene-C9F04_RS14805;Name=C9F04_RS14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14805;old_locus_tag=C9F04_15285;partial=true;pseudo=true;start_range=.,6417
NZ_PYKF01000498.1	Protein Homology	CDS	6417	6647	.	-	0	ID=cds-C9F04_RS14805;Parent=gene-C9F04_RS14805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=C9F04_RS14805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6417;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	6711	6974	.	-	.	ID=gene-C9F04_RS14810;Name=C9F04_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14810;old_locus_tag=C9F04_15290
NZ_PYKF01000498.1	GeneMarkS-2+	CDS	6711	6974	.	-	0	ID=cds-WP_186799034.1;Parent=gene-C9F04_RS14810;Dbxref=Genbank:WP_186799034.1;Name=WP_186799034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS14810;product=hypothetical protein;protein_id=WP_186799034.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	7059	7439	.	-	.	ID=gene-C9F04_RS14815;Name=C9F04_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14815;old_locus_tag=C9F04_15295
NZ_PYKF01000498.1	Protein Homology	CDS	7059	7439	.	-	0	ID=cds-WP_023235690.1;Parent=gene-C9F04_RS14815;Dbxref=Genbank:WP_023235690.1;Name=WP_023235690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540399.1;locus_tag=C9F04_RS14815;product=hypothetical protein;protein_id=WP_023235690.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	7517	7885	.	-	.	ID=gene-C9F04_RS26630;Name=C9F04_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26630
NZ_PYKF01000498.1	GeneMarkS-2+	CDS	7517	7885	.	-	0	ID=cds-WP_186799036.1;Parent=gene-C9F04_RS26630;Dbxref=Genbank:WP_186799036.1;Name=WP_186799036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26630;product=hypothetical protein;protein_id=WP_186799036.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	pseudogene	8044	8241	.	-	.	ID=gene-C9F04_RS26635;Name=C9F04_RS26635;end_range=8241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26635;partial=true;pseudo=true;start_range=.,8044
NZ_PYKF01000498.1	Protein Homology	CDS	8044	8241	.	-	0	ID=cds-C9F04_RS26635;Parent=gene-C9F04_RS26635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=C9F04_RS26635;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,8044;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	8289	8702	.	-	.	ID=gene-C9F04_RS14825;Name=C9F04_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14825;old_locus_tag=C9F04_15305
NZ_PYKF01000498.1	GeneMarkS-2+	CDS	8289	8702	.	-	0	ID=cds-WP_135420193.1;Parent=gene-C9F04_RS14825;Dbxref=Genbank:WP_135420193.1;Name=WP_135420193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS14825;product=hypothetical protein;protein_id=WP_135420193.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	pseudogene	8764	9034	.	-	.	ID=gene-C9F04_RS14830;Name=C9F04_RS14830;end_range=9034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14830;old_locus_tag=C9F04_15310;partial=true;pseudo=true;start_range=.,8764
NZ_PYKF01000498.1	Protein Homology	CDS	8764	9034	.	-	0	ID=cds-C9F04_RS14830;Parent=gene-C9F04_RS14830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=9034,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=C9F04_RS14830;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,8764;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	9425	9868	.	-	.	ID=gene-C9F04_RS14835;Name=C9F04_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14835;old_locus_tag=C9F04_15315
NZ_PYKF01000498.1	Protein Homology	CDS	9425	9868	.	-	0	ID=cds-WP_000646715.1;Parent=gene-C9F04_RS14835;Dbxref=Genbank:WP_000646715.1;Name=WP_000646715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=C9F04_RS14835;product=hypothetical protein;protein_id=WP_000646715.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	10415	10834	.	-	.	ID=gene-C9F04_RS14840;Name=C9F04_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14840;old_locus_tag=C9F04_15320
NZ_PYKF01000498.1	Protein Homology	CDS	10415	10834	.	-	0	ID=cds-WP_000502181.1;Parent=gene-C9F04_RS14840;Dbxref=Genbank:WP_000502181.1;Name=WP_000502181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=C9F04_RS14840;product=hypothetical protein;protein_id=WP_000502181.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	11489	12106	.	-	.	ID=gene-C9F04_RS14850;Name=C9F04_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14850;old_locus_tag=C9F04_15330
NZ_PYKF01000498.1	Protein Homology	CDS	11489	12106	.	-	0	ID=cds-WP_135369627.1;Parent=gene-C9F04_RS14850;Dbxref=Genbank:WP_135369627.1;Name=WP_135369627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=C9F04_RS14850;product=hypothetical protein;protein_id=WP_135369627.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	12270	13631	.	+	.	ID=gene-C9F04_RS14855;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=C9F04_RS14855;old_locus_tag=C9F04_15335
NZ_PYKF01000498.1	Protein Homology	CDS	12270	13631	.	+	0	ID=cds-WP_146712814.1;Parent=gene-C9F04_RS14855;Dbxref=Genbank:WP_146712814.1;Name=WP_146712814.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9F04_RS14855;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_146712814.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	14083	15129	.	+	.	ID=gene-C9F04_RS14860;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9F04_RS14860;old_locus_tag=C9F04_15340
NZ_PYKF01000498.1	Protein Homology	CDS	14083	15129	.	+	0	ID=cds-WP_146712810.1;Parent=gene-C9F04_RS14860;Dbxref=Genbank:WP_146712810.1;Name=WP_146712810.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9F04_RS14860;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_146712810.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	15165	15581	.	-	.	ID=gene-C9F04_RS14865;Name=C9F04_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14865;old_locus_tag=C9F04_15345
NZ_PYKF01000498.1	Protein Homology	CDS	15165	15581	.	-	0	ID=cds-WP_001555792.1;Parent=gene-C9F04_RS14865;Dbxref=Genbank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9F04_RS14865;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	15703	16038	.	-	.	ID=gene-C9F04_RS14870;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9F04_RS14870;old_locus_tag=C9F04_15350
NZ_PYKF01000498.1	Protein Homology	CDS	15703	16038	.	-	0	ID=cds-WP_001581073.1;Parent=gene-C9F04_RS14870;Dbxref=Genbank:WP_001581073.1;Name=WP_001581073.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9F04_RS14870;product=type III secretion system effector SteD;protein_id=WP_001581073.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	16603	17502	.	+	.	ID=gene-C9F04_RS14875;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9F04_RS14875;old_locus_tag=C9F04_15355
NZ_PYKF01000498.1	Protein Homology	CDS	16603	17502	.	+	0	ID=cds-WP_135369625.1;Parent=gene-C9F04_RS14875;Dbxref=Genbank:WP_135369625.1;Name=WP_135369625.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9F04_RS14875;product=lipid kinase YegS;protein_id=WP_135369625.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	17555	18607	.	-	.	ID=gene-C9F04_RS14880;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9F04_RS14880;old_locus_tag=C9F04_15360
NZ_PYKF01000498.1	Protein Homology	CDS	17555	18607	.	-	0	ID=cds-WP_000129590.1;Parent=gene-C9F04_RS14880;Dbxref=Genbank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9F04_RS14880;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	18861	20132	.	+	.	ID=gene-C9F04_RS14885;Name=C9F04_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14885;old_locus_tag=C9F04_15365
NZ_PYKF01000498.1	Protein Homology	CDS	18861	20132	.	+	0	ID=cds-WP_146712811.1;Parent=gene-C9F04_RS14885;Dbxref=Genbank:WP_146712811.1;Name=WP_146712811.1;Ontology_term=GO:0015858,GO:0005337,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9F04_RS14885;product=nucleoside permease;protein_id=WP_146712811.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	20129	21133	.	+	.	ID=gene-C9F04_RS14890;Name=C9F04_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14890;old_locus_tag=C9F04_15370
NZ_PYKF01000498.1	Protein Homology	CDS	20129	21133	.	+	0	ID=cds-WP_000642793.1;Parent=gene-C9F04_RS14890;Dbxref=Genbank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9F04_RS14890;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	21130	22095	.	+	.	ID=gene-C9F04_RS14895;Name=C9F04_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14895;old_locus_tag=C9F04_15375
NZ_PYKF01000498.1	Protein Homology	CDS	21130	22095	.	+	0	ID=cds-WP_146712812.1;Parent=gene-C9F04_RS14895;Dbxref=Genbank:WP_146712812.1;Name=WP_146712812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9F04_RS14895;product=PfkB family carbohydrate kinase;protein_id=WP_146712812.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	22069	22815	.	-	.	ID=gene-C9F04_RS14900;Name=C9F04_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14900;old_locus_tag=C9F04_15380
NZ_PYKF01000498.1	Protein Homology	CDS	22069	22815	.	-	0	ID=cds-WP_135369623.1;Parent=gene-C9F04_RS14900;Dbxref=Genbank:WP_135369623.1;Name=WP_135369623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9F04_RS14900;product=GntR family transcriptional regulator;protein_id=WP_135369623.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	22851	23651	.	-	.	ID=gene-C9F04_RS14905;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9F04_RS14905;old_locus_tag=C9F04_15385
NZ_PYKF01000498.1	Protein Homology	CDS	22851	23651	.	-	0	ID=cds-WP_063809097.1;Parent=gene-C9F04_RS14905;Dbxref=Genbank:WP_063809097.1;Name=WP_063809097.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9F04_RS14905;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_063809097.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	23638	24435	.	-	.	ID=gene-C9F04_RS14910;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9F04_RS14910;old_locus_tag=C9F04_15390
NZ_PYKF01000498.1	Protein Homology	CDS	23638	24435	.	-	0	ID=cds-WP_135369622.1;Parent=gene-C9F04_RS14910;Dbxref=Genbank:WP_135369622.1;Name=WP_135369622.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9F04_RS14910;product=hydroxyethylthiazole kinase;protein_id=WP_135369622.1;transl_table=11
NZ_PYKF01000498.1	cmsearch	riboswitch	24467	24563	.	-	.	ID=id-NZ_PYKF01000498.1:24467..24563;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000498.1	RefSeq	gene	24845	25159	.	+	.	ID=gene-C9F04_RS14915;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9F04_RS14915;old_locus_tag=C9F04_15395
NZ_PYKF01000498.1	Protein Homology	CDS	24845	25159	.	+	0	ID=cds-WP_000837534.1;Parent=gene-C9F04_RS14915;Dbxref=Genbank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9F04_RS14915;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	25203	26225	.	-	.	ID=gene-C9F04_RS14920;Name=C9F04_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14920;old_locus_tag=C9F04_15400
NZ_PYKF01000498.1	Protein Homology	CDS	25203	26225	.	-	0	ID=cds-WP_050067733.1;Parent=gene-C9F04_RS14920;Dbxref=Genbank:WP_050067733.1;Name=WP_050067733.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=C9F04_RS14920;product=fimbrial protein;protein_id=WP_050067733.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	26241	28727	.	-	.	ID=gene-C9F04_RS14925;Name=C9F04_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14925;old_locus_tag=C9F04_15405
NZ_PYKF01000498.1	Protein Homology	CDS	26241	28727	.	-	0	ID=cds-WP_023244531.1;Parent=gene-C9F04_RS14925;Dbxref=Genbank:WP_023244531.1;Name=WP_023244531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=C9F04_RS14925;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023244531.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	28756	29436	.	-	.	ID=gene-C9F04_RS14930;Name=C9F04_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14930;old_locus_tag=C9F04_15410
NZ_PYKF01000498.1	Protein Homology	CDS	28756	29436	.	-	0	ID=cds-WP_000871808.1;Parent=gene-C9F04_RS14930;Dbxref=Genbank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=C9F04_RS14930;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	29498	30031	.	-	.	ID=gene-C9F04_RS14935;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=C9F04_RS14935;old_locus_tag=C9F04_15415
NZ_PYKF01000498.1	Protein Homology	CDS	29498	30031	.	-	0	ID=cds-WP_000830690.1;Parent=gene-C9F04_RS14935;Dbxref=Genbank:WP_000830690.1;Name=WP_000830690.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=C9F04_RS14935;product=fimbrial protein YehD;protein_id=WP_000830690.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	30310	30591	.	-	.	ID=gene-C9F04_RS14940;Name=C9F04_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14940;old_locus_tag=C9F04_15420
NZ_PYKF01000498.1	Protein Homology	CDS	30310	30591	.	-	0	ID=cds-WP_135369621.1;Parent=gene-C9F04_RS14940;Dbxref=Genbank:WP_135369621.1;Name=WP_135369621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=C9F04_RS14940;product=DUF2574 family protein;protein_id=WP_135369621.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	30869	31978	.	-	.	ID=gene-C9F04_RS14945;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9F04_RS14945;old_locus_tag=C9F04_15425
NZ_PYKF01000498.1	Protein Homology	CDS	30869	31978	.	-	0	ID=cds-WP_146712813.1;Parent=gene-C9F04_RS14945;Dbxref=Genbank:WP_146712813.1;Name=WP_146712813.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9F04_RS14945;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_146712813.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	32143	34176	.	+	.	ID=gene-C9F04_RS14950;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F04_RS14950;old_locus_tag=C9F04_15430
NZ_PYKF01000498.1	Protein Homology	CDS	32143	34176	.	+	0	ID=cds-WP_000195330.1;Parent=gene-C9F04_RS14950;Dbxref=Genbank:WP_000195330.1;Name=WP_000195330.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9F04_RS14950;product=methionine--tRNA ligase;protein_id=WP_000195330.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	34417	34875	.	+	.	ID=gene-C9F04_RS14955;Name=C9F04_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14955;old_locus_tag=C9F04_15435
NZ_PYKF01000498.1	Protein Homology	CDS	34417	34875	.	+	0	ID=cds-WP_000703137.1;Parent=gene-C9F04_RS14955;Dbxref=Genbank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9F04_RS14955;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	35047	35577	.	+	.	ID=gene-C9F04_RS14960;Name=C9F04_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14960;old_locus_tag=C9F04_15440
NZ_PYKF01000498.1	Protein Homology	CDS	35047	35577	.	+	0	ID=cds-WP_135369620.1;Parent=gene-C9F04_RS14960;Dbxref=Genbank:WP_135369620.1;Name=WP_135369620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9F04_RS14960;product=YehR family lipoprotein;protein_id=WP_135369620.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	35634	36101	.	-	.	ID=gene-C9F04_RS14965;Name=C9F04_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14965;old_locus_tag=C9F04_15445
NZ_PYKF01000498.1	Protein Homology	CDS	35634	36101	.	-	0	ID=cds-WP_000950413.1;Parent=gene-C9F04_RS14965;Dbxref=Genbank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9F04_RS14965;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	36148	36867	.	-	.	ID=gene-C9F04_RS14970;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9F04_RS14970;old_locus_tag=C9F04_15450
NZ_PYKF01000498.1	Protein Homology	CDS	36148	36867	.	-	0	ID=cds-WP_000598637.1;Parent=gene-C9F04_RS14970;Dbxref=Genbank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9F04_RS14970;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11
NZ_PYKF01000498.1	RefSeq	gene	36864	37752	.	-	.	ID=gene-C9F04_RS14975;Name=C9F04_RS14975;end_range=37752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14975;old_locus_tag=C9F04_15455;partial=true
NZ_PYKF01000498.1	Protein Homology	CDS	36864	37752	.	-	1	ID=cds-WP_186799035.1;Parent=gene-C9F04_RS14975;Dbxref=Genbank:WP_186799035.1;Name=WP_186799035.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;end_range=37752,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9F04_RS14975;partial=true;product=histidine kinase;protein_id=WP_186799035.1;transl_table=11
##sequence-region NZ_PYKF01000310.1 1 5705
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000310.1	RefSeq	region	1	5705	.	+	.	ID=NZ_PYKF01000310.1:1..5705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000310.1	RefSeq	gene	1	1988	.	-	.	ID=gene-C9F04_RS09105;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9F04_RS09105;old_locus_tag=C9F04_09410;partial=true;start_range=.,1
NZ_PYKF01000310.1	Protein Homology	CDS	1	1988	.	-	0	ID=cds-WP_261770767.1;Parent=gene-C9F04_RS09105;Dbxref=Genbank:WP_261770767.1;Name=WP_261770767.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F04_RS09105;partial=true;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_261770767.1;start_range=.,1;transl_table=11
NZ_PYKF01000310.1	RefSeq	gene	2344	3072	.	-	.	ID=gene-C9F04_RS09110;Name=C9F04_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09110;old_locus_tag=C9F04_09415
NZ_PYKF01000310.1	Protein Homology	CDS	2344	3072	.	-	0	ID=cds-WP_001091009.1;Parent=gene-C9F04_RS09110;Dbxref=Genbank:WP_001091009.1;Name=WP_001091009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9F04_RS09110;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_001091009.1;transl_table=11
NZ_PYKF01000310.1	RefSeq	gene	3155	4039	.	-	.	ID=gene-C9F04_RS09115;Name=C9F04_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09115;old_locus_tag=C9F04_09420
NZ_PYKF01000310.1	Protein Homology	CDS	3155	4039	.	-	0	ID=cds-WP_135369375.1;Parent=gene-C9F04_RS09115;Dbxref=Genbank:WP_135369375.1;Name=WP_135369375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9F04_RS09115;product=GntR family transcriptional regulator;protein_id=WP_135369375.1;transl_table=11
NZ_PYKF01000310.1	RefSeq	gene	4089	5414	.	+	.	ID=gene-C9F04_RS09120;Name=C9F04_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09120;old_locus_tag=C9F04_09425
NZ_PYKF01000310.1	Protein Homology	CDS	4089	5414	.	+	0	ID=cds-WP_146712526.1;Parent=gene-C9F04_RS09120;Dbxref=Genbank:WP_146712526.1;Name=WP_146712526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F04_RS09120;product=MFS transporter;protein_id=WP_146712526.1;transl_table=11
NZ_PYKF01000310.1	RefSeq	pseudogene	5429	5705	.	+	.	ID=gene-C9F04_RS09125;Name=C9F04_RS09125;end_range=5705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09125;old_locus_tag=C9F04_09430;partial=true;pseudo=true
NZ_PYKF01000310.1	Protein Homology	CDS	5429	5705	.	+	0	ID=cds-C9F04_RS09125;Parent=gene-C9F04_RS09125;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9F04_RS09125;partial=true;product=mandelate racemase/muconate lactonizing enzyme family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000664.1 1 5697
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000664.1	RefSeq	region	1	5697	.	+	.	ID=NZ_PYKF01000664.1:1..5697;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000664.1	RefSeq	pseudogene	1	445	.	+	.	ID=gene-C9F04_RS20335;Name=C9F04_RS20335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20335;old_locus_tag=C9F04_21000;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000664.1	Protein Homology	CDS	1	445	.	+	1	ID=cds-C9F04_RS20335;Parent=gene-C9F04_RS20335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F04_RS20335;partial=true;product=uracil-xanthine permease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000664.1	RefSeq	gene	1001	2608	.	+	.	ID=gene-C9F04_RS20340;Name=C9F04_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20340;old_locus_tag=C9F04_21005
NZ_PYKF01000664.1	Protein Homology	CDS	1001	2608	.	+	0	ID=cds-WP_000028047.1;Parent=gene-C9F04_RS20340;Dbxref=Genbank:WP_000028047.1;Name=WP_000028047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9F04_RS20340;product=ABC transporter substrate-binding protein;protein_id=WP_000028047.1;transl_table=11
NZ_PYKF01000664.1	RefSeq	gene	2765	3784	.	+	.	ID=gene-C9F04_RS20345;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9F04_RS20345;old_locus_tag=C9F04_21010
NZ_PYKF01000664.1	Protein Homology	CDS	2765	3784	.	+	0	ID=cds-WP_000938843.1;Parent=gene-C9F04_RS20345;Dbxref=Genbank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9F04_RS20345;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11
NZ_PYKF01000664.1	RefSeq	gene	3794	4696	.	+	.	ID=gene-C9F04_RS20350;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9F04_RS20350;old_locus_tag=C9F04_21015
NZ_PYKF01000664.1	Protein Homology	CDS	3794	4696	.	+	0	ID=cds-WP_146713084.1;Parent=gene-C9F04_RS20350;Dbxref=Genbank:WP_146713084.1;Name=WP_146713084.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F04_RS20350;product=dipeptide ABC transporter permease DppC;protein_id=WP_146713084.1;transl_table=11
NZ_PYKF01000664.1	RefSeq	gene	4707	5690	.	+	.	ID=gene-C9F04_RS20355;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9F04_RS20355;old_locus_tag=C9F04_21020
NZ_PYKF01000664.1	Protein Homology	CDS	4707	5690	.	+	0	ID=cds-WP_146713085.1;Parent=gene-C9F04_RS20355;Dbxref=Genbank:WP_146713085.1;Name=WP_146713085.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9F04_RS20355;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_146713085.1;transl_table=11
##sequence-region NZ_PYKF01000293.1 1 5688
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000293.1	RefSeq	region	1	5688	.	+	.	ID=NZ_PYKF01000293.1:1..5688;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000293.1	RefSeq	pseudogene	1	268	.	+	.	ID=gene-C9F04_RS08515;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=C9F04_RS08515;old_locus_tag=C9F04_08790;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000293.1	Protein Homology	CDS	1	268	.	+	1	ID=cds-C9F04_RS08515;Parent=gene-C9F04_RS08515;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9F04_RS08515;partial=true;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	261	506	.	+	.	ID=gene-C9F04_RS08520;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9F04_RS08520;old_locus_tag=C9F04_08795
NZ_PYKF01000293.1	Protein Homology	CDS	261	506	.	+	0	ID=cds-WP_000598596.1;Parent=gene-C9F04_RS08520;Dbxref=Genbank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9F04_RS08520;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	508	960	.	+	.	ID=gene-C9F04_RS08525;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9F04_RS08525;old_locus_tag=C9F04_08800
NZ_PYKF01000293.1	Protein Homology	CDS	508	960	.	+	0	ID=cds-WP_001209384.1;Parent=gene-C9F04_RS08525;Dbxref=Genbank:WP_001209384.1;Name=WP_001209384.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9F04_RS08525;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209384.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	1008	1712	.	+	.	ID=gene-C9F04_RS08530;Name=C9F04_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08530;old_locus_tag=C9F04_08805
NZ_PYKF01000293.1	Protein Homology	CDS	1008	1712	.	+	0	ID=cds-WP_000373612.1;Parent=gene-C9F04_RS08530;Dbxref=Genbank:WP_000373612.1;Name=WP_000373612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9F04_RS08530;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373612.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	1857	2564	.	+	.	ID=gene-C9F04_RS08535;Name=C9F04_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08535;old_locus_tag=C9F04_08815
NZ_PYKF01000293.1	Protein Homology	CDS	1857	2564	.	+	0	ID=cds-WP_000529062.1;Parent=gene-C9F04_RS08535;Dbxref=Genbank:WP_000529062.1;Name=WP_000529062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9F04_RS08535;product=Bax inhibitor-1 family protein;protein_id=WP_000529062.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	2588	3196	.	+	.	ID=gene-C9F04_RS08540;Name=C9F04_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08540;old_locus_tag=C9F04_08820
NZ_PYKF01000293.1	Protein Homology	CDS	2588	3196	.	+	0	ID=cds-WP_135369196.1;Parent=gene-C9F04_RS08540;Dbxref=Genbank:WP_135369196.1;Name=WP_135369196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9F04_RS08540;product=hypothetical protein;protein_id=WP_135369196.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	3204	3764	.	+	.	ID=gene-C9F04_RS08545;Name=C9F04_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08545;old_locus_tag=C9F04_08825
NZ_PYKF01000293.1	Protein Homology	CDS	3204	3764	.	+	0	ID=cds-WP_001052197.1;Parent=gene-C9F04_RS08545;Dbxref=Genbank:WP_001052197.1;Name=WP_001052197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9F04_RS08545;product=hypothetical protein;protein_id=WP_001052197.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	3767	4729	.	-	.	ID=gene-C9F04_RS08550;Name=C9F04_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08550;old_locus_tag=C9F04_08830
NZ_PYKF01000293.1	Protein Homology	CDS	3767	4729	.	-	0	ID=cds-WP_001129813.1;Parent=gene-C9F04_RS08550;Dbxref=Genbank:WP_001129813.1;Name=WP_001129813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9F04_RS08550;product=YbhN family protein;protein_id=WP_001129813.1;transl_table=11
NZ_PYKF01000293.1	RefSeq	gene	4729	5688	.	-	.	ID=gene-C9F04_RS08555;Name=clsB;end_range=5688,.;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9F04_RS08555;old_locus_tag=C9F04_08835;partial=true
NZ_PYKF01000293.1	Protein Homology	CDS	4729	5688	.	-	0	ID=cds-WP_146712504.1;Parent=gene-C9F04_RS08555;Dbxref=Genbank:WP_146712504.1;Name=WP_146712504.1;Ontology_term=GO:0032049,GO:0008808;end_range=5688,.;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742919.1;locus_tag=C9F04_RS08555;partial=true;product=cardiolipin synthase ClsB;protein_id=WP_146712504.1;transl_table=11
##sequence-region NZ_PYKF01000456.1 1 5682
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000456.1	RefSeq	region	1	5682	.	+	.	ID=NZ_PYKF01000456.1:1..5682;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000456.1	RefSeq	pseudogene	1	170	.	+	.	ID=gene-C9F04_RS27045;Name=C9F04_RS27045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27045;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000456.1	Protein Homology	CDS	1	170	.	+	2	ID=cds-C9F04_RS27045;Parent=gene-C9F04_RS27045;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F04_RS27045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	167	1126	.	+	.	ID=gene-C9F04_RS13735;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9F04_RS13735;old_locus_tag=C9F04_14180
NZ_PYKF01000456.1	Protein Homology	CDS	167	1126	.	+	0	ID=cds-WP_146712768.1;Parent=gene-C9F04_RS13735;Dbxref=Genbank:WP_146712768.1;Name=WP_146712768.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9F04_RS13735;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_146712768.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	1137	1769	.	+	.	ID=gene-C9F04_RS13740;Name=C9F04_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13740;old_locus_tag=C9F04_14185
NZ_PYKF01000456.1	Protein Homology	CDS	1137	1769	.	+	0	ID=cds-WP_064047176.1;Parent=gene-C9F04_RS13740;Dbxref=Genbank:WP_064047176.1;Name=WP_064047176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9F04_RS13740;product=cobalt-precorrin-8 methylmutase;protein_id=WP_064047176.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	1769	2908	.	+	.	ID=gene-C9F04_RS13745;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9F04_RS13745;old_locus_tag=C9F04_14190
NZ_PYKF01000456.1	Protein Homology	CDS	1769	2908	.	+	0	ID=cds-WP_001292910.1;Parent=gene-C9F04_RS13745;Dbxref=Genbank:WP_001292910.1;Name=WP_001292910.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9F04_RS13745;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292910.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	2902	3507	.	+	.	ID=gene-C9F04_RS13750;Name=C9F04_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13750;old_locus_tag=C9F04_14195
NZ_PYKF01000456.1	Protein Homology	CDS	2902	3507	.	+	0	ID=cds-WP_000958839.1;Parent=gene-C9F04_RS13750;Dbxref=Genbank:WP_000958839.1;Name=WP_000958839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9F04_RS13750;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958839.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	3497	4075	.	+	.	ID=gene-C9F04_RS13755;Name=C9F04_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13755;old_locus_tag=C9F04_14200
NZ_PYKF01000456.1	Protein Homology	CDS	3497	4075	.	+	0	ID=cds-WP_023204216.1;Parent=gene-C9F04_RS13755;Dbxref=Genbank:WP_023204216.1;Name=WP_023204216.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9F04_RS13755;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_023204216.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	4059	4832	.	+	.	ID=gene-C9F04_RS13760;Name=C9F04_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13760;old_locus_tag=C9F04_14205
NZ_PYKF01000456.1	Protein Homology	CDS	4059	4832	.	+	0	ID=cds-WP_048591649.1;Parent=gene-C9F04_RS13760;Dbxref=Genbank:WP_048591649.1;Name=WP_048591649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9F04_RS13760;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_048591649.1;transl_table=11
NZ_PYKF01000456.1	RefSeq	gene	4813	5682	.	+	.	ID=gene-C9F04_RS13765;Name=cbiG;end_range=5682,.;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9F04_RS13765;old_locus_tag=C9F04_14210;partial=true
NZ_PYKF01000456.1	Protein Homology	CDS	4813	5682	.	+	0	ID=cds-WP_146712769.1;Parent=gene-C9F04_RS13765;Dbxref=Genbank:WP_146712769.1;Name=WP_146712769.1;end_range=5682,.;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9F04_RS13765;partial=true;product=cobalt-precorrin 5A hydrolase;protein_id=WP_146712769.1;transl_table=11
##sequence-region NZ_PYKF01000714.1 1 5635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000714.1	RefSeq	region	1	5635	.	+	.	ID=NZ_PYKF01000714.1:1..5635;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000714.1	RefSeq	pseudogene	57	785	.	+	.	ID=gene-C9F04_RS22130;Name=C9F04_RS22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22130;old_locus_tag=C9F04_22865;partial=true;pseudo=true;start_range=.,57
NZ_PYKF01000714.1	Protein Homology	CDS	57	785	.	+	0	ID=cds-C9F04_RS22130;Parent=gene-C9F04_RS22130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019264,GO:0004372;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F04_RS22130;partial=true;product=serine hydroxymethyltransferase;pseudo=true;start_range=.,57;transl_table=11
NZ_PYKF01000714.1	RefSeq	gene	981	2120	.	+	.	ID=gene-C9F04_RS22135;Name=C9F04_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22135;old_locus_tag=C9F04_22870
NZ_PYKF01000714.1	Protein Homology	CDS	981	2120	.	+	0	ID=cds-WP_052944199.1;Parent=gene-C9F04_RS22135;Dbxref=Genbank:WP_052944199.1;Name=WP_052944199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9F04_RS22135;product=3-phenylpropionate MFS transporter;protein_id=WP_052944199.1;transl_table=11
NZ_PYKF01000714.1	RefSeq	gene	2115	3392	.	-	.	ID=gene-C9F04_RS22140;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9F04_RS22140;old_locus_tag=C9F04_22875
NZ_PYKF01000714.1	Protein Homology	CDS	2115	3392	.	-	0	ID=cds-WP_080052054.1;Parent=gene-C9F04_RS22140;Dbxref=Genbank:WP_080052054.1;Name=WP_080052054.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9F04_RS22140;product=stationary phase inducible protein CsiE;protein_id=WP_080052054.1;transl_table=11
NZ_PYKF01000714.1	RefSeq	gene	3518	4156	.	+	.	ID=gene-C9F04_RS22145;Name=C9F04_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22145;old_locus_tag=C9F04_22880
NZ_PYKF01000714.1	Protein Homology	CDS	3518	4156	.	+	0	ID=cds-WP_135369075.1;Parent=gene-C9F04_RS22145;Dbxref=Genbank:WP_135369075.1;Name=WP_135369075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9F04_RS22145;product=DUF1007 family protein;protein_id=WP_135369075.1;transl_table=11
NZ_PYKF01000714.1	RefSeq	gene	4147	5133	.	+	.	ID=gene-C9F04_RS22150;Name=C9F04_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22150;old_locus_tag=C9F04_22885
NZ_PYKF01000714.1	Protein Homology	CDS	4147	5133	.	+	0	ID=cds-WP_146713185.1;Parent=gene-C9F04_RS22150;Dbxref=Genbank:WP_146713185.1;Name=WP_146713185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9F04_RS22150;product=nickel/cobalt transporter;protein_id=WP_146713185.1;transl_table=11
NZ_PYKF01000714.1	RefSeq	pseudogene	5134	5635	.	-	.	ID=gene-C9F04_RS22155;Name=asrC;end_range=5635,.;gbkey=Gene;gene=asrC;gene_biotype=pseudogene;locus_tag=C9F04_RS22155;old_locus_tag=C9F04_22890;partial=true;pseudo=true
NZ_PYKF01000714.1	Protein Homology	CDS	5134	5635	.	-	1	ID=cds-C9F04_RS22155;Parent=gene-C9F04_RS22155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5635,.;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9F04_RS22155;partial=true;product=anaerobic sulfite reductase subunit AsrC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000366.1 1 5620
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000366.1	RefSeq	region	1	5620	.	+	.	ID=NZ_PYKF01000366.1:1..5620;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000366.1	RefSeq	gene	1	500	.	-	.	ID=gene-C9F04_RS10735;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9F04_RS10735;old_locus_tag=C9F04_11070;partial=true;start_range=.,1
NZ_PYKF01000366.1	Protein Homology	CDS	1	500	.	-	0	ID=cds-WP_146712620.1;Parent=gene-C9F04_RS10735;Dbxref=Genbank:WP_146712620.1;Name=WP_146712620.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9F04_RS10735;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_146712620.1;start_range=.,1;transl_table=11
NZ_PYKF01000366.1	RefSeq	gene	545	1093	.	-	.	ID=gene-C9F04_RS10740;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9F04_RS10740;old_locus_tag=C9F04_11075
NZ_PYKF01000366.1	Protein Homology	CDS	545	1093	.	-	0	ID=cds-WP_000043266.1;Parent=gene-C9F04_RS10740;Dbxref=Genbank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9F04_RS10740;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11
NZ_PYKF01000366.1	RefSeq	gene	1112	1360	.	-	.	ID=gene-C9F04_RS10745;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9F04_RS10745;old_locus_tag=C9F04_11080
NZ_PYKF01000366.1	Protein Homology	CDS	1112	1360	.	-	0	ID=cds-WP_000256453.1;Parent=gene-C9F04_RS10745;Dbxref=Genbank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9F04_RS10745;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11
NZ_PYKF01000366.1	RefSeq	gene	1704	3065	.	-	.	ID=gene-C9F04_RS10750;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9F04_RS10750;old_locus_tag=C9F04_11085
NZ_PYKF01000366.1	Protein Homology	CDS	1704	3065	.	-	0	ID=cds-WP_000460052.1;Parent=gene-C9F04_RS10750;Dbxref=Genbank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F04_RS10750;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11
NZ_PYKF01000366.1	RefSeq	gene	3231	4022	.	+	.	ID=gene-C9F04_RS10755;Name=C9F04_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10755;old_locus_tag=C9F04_11090
NZ_PYKF01000366.1	Protein Homology	CDS	3231	4022	.	+	0	ID=cds-WP_001537507.1;Parent=gene-C9F04_RS10755;Dbxref=Genbank:WP_001537507.1;Name=WP_001537507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9F04_RS10755;product=inner membrane protein YpjD;protein_id=WP_001537507.1;transl_table=11
NZ_PYKF01000366.1	RefSeq	gene	4042	5328	.	+	.	ID=gene-C9F04_RS10760;Name=C9F04_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10760;old_locus_tag=C9F04_11095
NZ_PYKF01000366.1	Protein Homology	CDS	4042	5328	.	+	0	ID=cds-WP_127172650.1;Parent=gene-C9F04_RS10760;Dbxref=Genbank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9F04_RS10760;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11
NZ_PYKF01000366.1	RefSeq	pseudogene	5449	5620	.	+	.	ID=gene-C9F04_RS27010;Name=C9F04_RS27010;end_range=5620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27010;partial=true;pseudo=true
NZ_PYKF01000366.1	Protein Homology	CDS	5449	5620	.	+	0	ID=cds-C9F04_RS27010;Parent=gene-C9F04_RS27010;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9F04_RS27010;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000472.1 1 5617
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000472.1	RefSeq	region	1	5617	.	+	.	ID=NZ_PYKF01000472.1:1..5617;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000472.1	RefSeq	gene	1	239	.	+	.	ID=gene-C9F04_RS14135;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9F04_RS14135;old_locus_tag=C9F04_14595;partial=true;start_range=.,1
NZ_PYKF01000472.1	Protein Homology	CDS	1	239	.	+	2	ID=cds-WP_146712786.1;Parent=gene-C9F04_RS14135;Dbxref=Genbank:WP_146712786.1;Name=WP_146712786.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9F04_RS14135;partial=true;product=VOC family metalloprotein YjdN;protein_id=WP_146712786.1;start_range=.,1;transl_table=11
NZ_PYKF01000472.1	RefSeq	gene	369	818	.	-	.	ID=gene-C9F04_RS14140;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=C9F04_RS14140;old_locus_tag=C9F04_14600
NZ_PYKF01000472.1	Protein Homology	CDS	369	818	.	-	0	ID=cds-WP_057935359.1;Parent=gene-C9F04_RS14140;Dbxref=Genbank:WP_057935359.1;Name=WP_057935359.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=C9F04_RS14140;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_057935359.1;transl_table=11
NZ_PYKF01000472.1	RefSeq	gene	1178	2068	.	+	.	ID=gene-C9F04_RS14145;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;gene_synonym=rpiR;locus_tag=C9F04_RS14145;old_locus_tag=C9F04_14605
NZ_PYKF01000472.1	Protein Homology	CDS	1178	2068	.	+	0	ID=cds-WP_031605717.1;Parent=gene-C9F04_RS14145;Dbxref=Genbank:WP_031605717.1;Name=WP_031605717.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=C9F04_RS14145;product=als operon DNA-binding transcriptional repressor AlsR;protein_id=WP_031605717.1;transl_table=11
NZ_PYKF01000472.1	RefSeq	gene	2131	3072	.	+	.	ID=gene-C9F04_RS14150;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=C9F04_RS14150;old_locus_tag=C9F04_14610
NZ_PYKF01000472.1	Protein Homology	CDS	2131	3072	.	+	0	ID=cds-WP_135369150.1;Parent=gene-C9F04_RS14150;Dbxref=Genbank:WP_135369150.1;Name=WP_135369150.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9F04_RS14150;product=D-allose transporter substrate-binding protein;protein_id=WP_135369150.1;transl_table=11
NZ_PYKF01000472.1	RefSeq	gene	3192	4724	.	+	.	ID=gene-C9F04_RS14155;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=C9F04_RS14155;old_locus_tag=C9F04_14615
NZ_PYKF01000472.1	Protein Homology	CDS	3192	4724	.	+	0	ID=cds-WP_031605714.1;Parent=gene-C9F04_RS14155;Dbxref=Genbank:WP_031605714.1;Name=WP_031605714.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=C9F04_RS14155;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_031605714.1;transl_table=11
NZ_PYKF01000472.1	RefSeq	gene	4703	5617	.	+	.	ID=gene-C9F04_RS14160;Name=alsC;end_range=5617,.;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=C9F04_RS14160;old_locus_tag=C9F04_14620;partial=true
NZ_PYKF01000472.1	Protein Homology	CDS	4703	5617	.	+	0	ID=cds-WP_146712787.1;Parent=gene-C9F04_RS14160;Dbxref=Genbank:WP_146712787.1;Name=WP_146712787.1;end_range=5617,.;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9F04_RS14160;partial=true;product=D-allose ABC transporter permease;protein_id=WP_146712787.1;transl_table=11
##sequence-region NZ_PYKF01000778.1 1 5562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000778.1	RefSeq	region	1	5562	.	+	.	ID=NZ_PYKF01000778.1:1..5562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000778.1	RefSeq	pseudogene	1	121	.	-	.	ID=gene-C9F04_RS24350;Name=C9F04_RS24350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24350;old_locus_tag=C9F04_25170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000778.1	Protein Homology	CDS	1	121	.	-	0	ID=cds-C9F04_RS24350;Parent=gene-C9F04_RS24350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9F04_RS24350;partial=true;product=propanediol/glycerol family dehydratase large subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000778.1	RefSeq	gene	140	952	.	-	.	ID=gene-C9F04_RS24355;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9F04_RS24355;old_locus_tag=C9F04_25175
NZ_PYKF01000778.1	Protein Homology	CDS	140	952	.	-	0	ID=cds-WP_000097500.1;Parent=gene-C9F04_RS24355;Dbxref=Genbank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9F04_RS24355;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11
NZ_PYKF01000778.1	RefSeq	gene	910	1233	.	-	.	ID=gene-C9F04_RS24360;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F04_RS24360;old_locus_tag=C9F04_25180
NZ_PYKF01000778.1	Protein Homology	CDS	910	1233	.	-	0	ID=cds-WP_146713292.1;Parent=gene-C9F04_RS24360;Dbxref=Genbank:WP_146713292.1;Name=WP_146713292.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372127.1;locus_tag=C9F04_RS24360;product=propanediol utilization microcompartment protein PduA;protein_id=WP_146713292.1;transl_table=11
NZ_PYKF01000778.1	RefSeq	gene	1758	2552	.	+	.	ID=gene-C9F04_RS24365;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9F04_RS24365;old_locus_tag=C9F04_25185
NZ_PYKF01000778.1	Protein Homology	CDS	1758	2552	.	+	0	ID=cds-WP_001000023.1;Parent=gene-C9F04_RS24365;Dbxref=Genbank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F04_RS24365;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11
NZ_PYKF01000778.1	RefSeq	gene	2769	3680	.	+	.	ID=gene-C9F04_RS24370;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9F04_RS24370;old_locus_tag=C9F04_25190
NZ_PYKF01000778.1	Protein Homology	CDS	2769	3680	.	+	0	ID=cds-WP_000622326.1;Parent=gene-C9F04_RS24370;Dbxref=Genbank:WP_000622326.1;Name=WP_000622326.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9F04_RS24370;product=regulatory protein PocR;protein_id=WP_000622326.1;transl_table=11
NZ_PYKF01000778.1	cmsearch	riboswitch	4006	4181	.	+	.	ID=id-NZ_PYKF01000778.1:4006..4181;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000778.1	RefSeq	pseudogene	4278	5562	.	+	.	ID=gene-C9F04_RS24375;Name=C9F04_RS24375;end_range=5562,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24375;old_locus_tag=C9F04_25195;partial=true;pseudo=true
NZ_PYKF01000778.1	Protein Homology	CDS	4278	5562	.	+	0	ID=cds-C9F04_RS24375;Parent=gene-C9F04_RS24375;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0042242;end_range=5562,.;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077095.1;locus_tag=C9F04_RS24375;partial=true;product=cobyrinate a%2Cc-diamide synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000578.1 1 5462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000578.1	RefSeq	region	1	5462	.	+	.	ID=NZ_PYKF01000578.1:1..5462;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000578.1	RefSeq	gene	1	648	.	+	.	ID=gene-C9F04_RS17255;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9F04_RS17255;old_locus_tag=C9F04_17815;partial=true;start_range=.,1
NZ_PYKF01000578.1	Protein Homology	CDS	1	648	.	+	0	ID=cds-WP_146712933.1;Parent=gene-C9F04_RS17255;Dbxref=Genbank:WP_146712933.1;Name=WP_146712933.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9F04_RS17255;partial=true;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_146712933.1;start_range=.,1;transl_table=11
NZ_PYKF01000578.1	RefSeq	gene	663	1388	.	+	.	ID=gene-C9F04_RS17260;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9F04_RS17260;old_locus_tag=C9F04_17820
NZ_PYKF01000578.1	Protein Homology	CDS	663	1388	.	+	0	ID=cds-WP_000377800.1;Parent=gene-C9F04_RS17260;Dbxref=Genbank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9F04_RS17260;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11
NZ_PYKF01000578.1	RefSeq	gene	1483	2148	.	-	.	ID=gene-C9F04_RS17265;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9F04_RS17265;old_locus_tag=C9F04_17825
NZ_PYKF01000578.1	Protein Homology	CDS	1483	2148	.	-	0	ID=cds-WP_135369100.1;Parent=gene-C9F04_RS17265;Dbxref=Genbank:WP_135369100.1;Name=WP_135369100.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9F04_RS17265;product=6-phosphogluconate phosphatase;protein_id=WP_135369100.1;transl_table=11
NZ_PYKF01000578.1	RefSeq	pseudogene	2317	3654	.	+	.	ID=gene-C9F04_RS17270;Name=C9F04_RS17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17270;old_locus_tag=C9F04_17830;pseudo=true
NZ_PYKF01000578.1	Protein Homology	CDS	2317	3654	.	+	0	ID=cds-C9F04_RS17270;Parent=gene-C9F04_RS17270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9F04_RS17270;product=NCS2 family permease;pseudo=true;transl_table=11
NZ_PYKF01000578.1	RefSeq	gene	3699	4283	.	-	.	ID=gene-C9F04_RS17275;Name=C9F04_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17275;old_locus_tag=C9F04_17835
NZ_PYKF01000578.1	Protein Homology	CDS	3699	4283	.	-	0	ID=cds-WP_146712934.1;Parent=gene-C9F04_RS17275;Dbxref=Genbank:WP_146712934.1;Name=WP_146712934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9F04_RS17275;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_146712934.1;transl_table=11
NZ_PYKF01000578.1	RefSeq	gene	4283	5038	.	-	.	ID=gene-C9F04_RS17280;Name=C9F04_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17280;old_locus_tag=C9F04_17840
NZ_PYKF01000578.1	Protein Homology	CDS	4283	5038	.	-	0	ID=cds-WP_000190678.1;Parent=gene-C9F04_RS17280;Dbxref=Genbank:WP_000190678.1;Name=WP_000190678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9F04_RS17280;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_000190678.1;transl_table=11
NZ_PYKF01000578.1	RefSeq	pseudogene	5196	5462	.	-	.	ID=gene-C9F04_RS17285;Name=C9F04_RS17285;end_range=5462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17285;old_locus_tag=C9F04_17845;partial=true;pseudo=true
NZ_PYKF01000578.1	Protein Homology	CDS	5196	5462	.	-	0	ID=cds-C9F04_RS17285;Parent=gene-C9F04_RS17285;Note=Involved in anaerobic NO protection%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F04_RS17285;partial=true;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000799.1 1 19744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000799.1	RefSeq	region	1	19744	.	+	.	ID=NZ_PYKF01000799.1:1..19744;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000799.1	RefSeq	pseudogene	1	891	.	-	.	ID=gene-C9F04_RS24830;Name=C9F04_RS24830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24830;old_locus_tag=C9F04_25680;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000799.1	Protein Homology	CDS	1	891	.	-	0	ID=cds-C9F04_RS24830;Parent=gene-C9F04_RS24830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9F04_RS24830;partial=true;product=inositol phosphate phosphatase SopB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	1225	1395	.	+	.	ID=gene-C9F04_RS24835;Name=C9F04_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24835;old_locus_tag=C9F04_25685
NZ_PYKF01000799.1	Protein Homology	CDS	1225	1395	.	+	0	ID=cds-WP_001111006.1;Parent=gene-C9F04_RS24835;Dbxref=Genbank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9F04_RS24835;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	1396	1506	.	-	.	ID=gene-C9F04_RS24840;Name=C9F04_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24840;old_locus_tag=C9F04_25690
NZ_PYKF01000799.1	Protein Homology	CDS	1396	1506	.	-	0	ID=cds-WP_000174813.1;Parent=gene-C9F04_RS24840;Dbxref=Genbank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9F04_RS24840;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	1615	3084	.	-	.	ID=gene-C9F04_RS24845;Name=C9F04_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24845;old_locus_tag=C9F04_25695
NZ_PYKF01000799.1	Protein Homology	CDS	1615	3084	.	-	0	ID=cds-WP_000760235.1;Parent=gene-C9F04_RS24845;Dbxref=Genbank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9F04_RS24845;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	3257	4621	.	-	.	ID=gene-C9F04_RS24850;Name=C9F04_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24850;old_locus_tag=C9F04_25700
NZ_PYKF01000799.1	Protein Homology	CDS	3257	4621	.	-	0	ID=cds-WP_000240033.1;Parent=gene-C9F04_RS24850;Dbxref=Genbank:WP_000240033.1;Name=WP_000240033.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9F04_RS24850;product=heavy metal sensor histidine kinase;protein_id=WP_000240033.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	4614	5294	.	-	.	ID=gene-C9F04_RS24855;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=C9F04_RS24855;old_locus_tag=C9F04_25705
NZ_PYKF01000799.1	Protein Homology	CDS	4614	5294	.	-	0	ID=cds-WP_135369345.1;Parent=gene-C9F04_RS24855;Dbxref=Genbank:WP_135369345.1;Name=WP_135369345.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9F04_RS24855;product=response regulator transcription factor HprR;protein_id=WP_135369345.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	5430	5840	.	+	.	ID=gene-C9F04_RS24860;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9F04_RS24860;old_locus_tag=C9F04_25710
NZ_PYKF01000799.1	Protein Homology	CDS	5430	5840	.	+	0	ID=cds-WP_000833182.1;Parent=gene-C9F04_RS24860;Dbxref=Genbank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9F04_RS24860;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	6173	6685	.	-	.	ID=gene-C9F04_RS24865;Name=C9F04_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24865;old_locus_tag=C9F04_25715
NZ_PYKF01000799.1	Protein Homology	CDS	6173	6685	.	-	0	ID=cds-WP_001195556.1;Parent=gene-C9F04_RS24865;Dbxref=Genbank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9F04_RS24865;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	6703	8265	.	-	.	ID=gene-C9F04_RS24870;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9F04_RS24870;old_locus_tag=C9F04_25720
NZ_PYKF01000799.1	Protein Homology	CDS	6703	8265	.	-	0	ID=cds-WP_146713324.1;Parent=gene-C9F04_RS24870;Dbxref=Genbank:WP_146713324.1;Name=WP_146713324.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9F04_RS24870;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_146713324.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	8483	8923	.	-	.	ID=gene-C9F04_RS24875;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9F04_RS24875;old_locus_tag=C9F04_25725
NZ_PYKF01000799.1	Protein Homology	CDS	8483	8923	.	-	0	ID=cds-WP_000543922.1;Parent=gene-C9F04_RS24875;Dbxref=Genbank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9F04_RS24875;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	9198	10487	.	+	.	ID=gene-C9F04_RS24880;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9F04_RS24880;old_locus_tag=C9F04_25730
NZ_PYKF01000799.1	Protein Homology	CDS	9198	10487	.	+	0	ID=cds-WP_146713325.1;Parent=gene-C9F04_RS24880;Dbxref=Genbank:WP_146713325.1;Name=WP_146713325.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9F04_RS24880;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_146713325.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	10484	11950	.	+	.	ID=gene-C9F04_RS24885;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9F04_RS24885;old_locus_tag=C9F04_25735
NZ_PYKF01000799.1	Protein Homology	CDS	10484	11950	.	+	0	ID=cds-WP_146713326.1;Parent=gene-C9F04_RS24885;Dbxref=Genbank:WP_146713326.1;Name=WP_146713326.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9F04_RS24885;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_146713326.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	11952	12803	.	+	.	ID=gene-C9F04_RS24890;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9F04_RS24890;old_locus_tag=C9F04_25740
NZ_PYKF01000799.1	Protein Homology	CDS	11952	12803	.	+	0	ID=cds-WP_000516978.1;Parent=gene-C9F04_RS24890;Dbxref=Genbank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9F04_RS24890;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	12813	13193	.	+	.	ID=gene-C9F04_RS24895;Name=C9F04_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24895;old_locus_tag=C9F04_25745
NZ_PYKF01000799.1	Protein Homology	CDS	12813	13193	.	+	0	ID=cds-WP_001119857.1;Parent=gene-C9F04_RS24895;Dbxref=Genbank:WP_001119857.1;Name=WP_001119857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9F04_RS24895;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119857.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	13337	14140	.	+	.	ID=gene-C9F04_RS24900;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9F04_RS24900;old_locus_tag=C9F04_25755
NZ_PYKF01000799.1	Protein Homology	CDS	13337	14140	.	+	0	ID=cds-WP_000884795.1;Parent=gene-C9F04_RS24900;Dbxref=Genbank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9F04_RS24900;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_000884795.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	14151	14942	.	+	.	ID=gene-C9F04_RS24905;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9F04_RS24905;old_locus_tag=C9F04_25760
NZ_PYKF01000799.1	Protein Homology	CDS	14151	14942	.	+	0	ID=cds-WP_146713327.1;Parent=gene-C9F04_RS24905;Dbxref=Genbank:WP_146713327.1;Name=WP_146713327.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9F04_RS24905;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_146713327.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	15014	16390	.	+	.	ID=gene-C9F04_RS24910;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9F04_RS24910;old_locus_tag=C9F04_25765
NZ_PYKF01000799.1	Protein Homology	CDS	15014	16390	.	+	0	ID=cds-WP_135369071.1;Parent=gene-C9F04_RS24910;Dbxref=Genbank:WP_135369071.1;Name=WP_135369071.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9F04_RS24910;product=4-hydroxyphenylacetate permease;protein_id=WP_135369071.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	16400	17296	.	+	.	ID=gene-C9F04_RS24915;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9F04_RS24915;old_locus_tag=C9F04_25770
NZ_PYKF01000799.1	Protein Homology	CDS	16400	17296	.	+	0	ID=cds-WP_146713328.1;Parent=gene-C9F04_RS24915;Dbxref=Genbank:WP_146713328.1;Name=WP_146713328.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9F04_RS24915;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_146713328.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	17310	18248	.	+	.	ID=gene-C9F04_RS24920;Name=C9F04_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24920;old_locus_tag=C9F04_25775
NZ_PYKF01000799.1	Protein Homology	CDS	17310	18248	.	+	0	ID=cds-WP_135369072.1;Parent=gene-C9F04_RS24920;Dbxref=Genbank:WP_135369072.1;Name=WP_135369072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9F04_RS24920;product=MBL fold metallo-hydrolase;protein_id=WP_135369072.1;transl_table=11
NZ_PYKF01000799.1	RefSeq	gene	18656	19018	.	-	.	ID=gene-C9F04_RS24925;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=C9F04_RS24925;old_locus_tag=C9F04_25780
NZ_PYKF01000799.1	Protein Homology	CDS	18656	19018	.	-	0	ID=cds-WP_001537781.1;Parent=gene-C9F04_RS24925;Dbxref=Genbank:WP_001537781.1;Name=WP_001537781.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9F04_RS24925;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11
##sequence-region NZ_PYKF01000156.1 1 5457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000156.1	RefSeq	region	1	5457	.	+	.	ID=NZ_PYKF01000156.1:1..5457;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000156.1	RefSeq	gene	1	150	.	+	.	ID=gene-C9F04_RS03290;Name=C9F04_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03290;old_locus_tag=C9F04_03395;partial=true;start_range=.,1
NZ_PYKF01000156.1	Protein Homology	CDS	1	150	.	+	0	ID=cds-WP_146712288.1;Parent=gene-C9F04_RS03290;Dbxref=Genbank:WP_146712288.1;Name=WP_146712288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9F04_RS03290;partial=true;product=flagellar protein FlhE;protein_id=WP_146712288.1;start_range=.,1;transl_table=11
NZ_PYKF01000156.1	RefSeq	pseudogene	387	1526	.	+	.	ID=gene-C9F04_RS03295;Name=C9F04_RS03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03295;old_locus_tag=C9F04_03400;pseudo=true
NZ_PYKF01000156.1	Protein Homology	CDS	387	1526	.	+	0	ID=cds-C9F04_RS03295;Parent=gene-C9F04_RS03295;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F04_RS03295;product=glycoside hydrolase family 105 protein;pseudo=true;transl_table=11
NZ_PYKF01000156.1	RefSeq	gene	1580	3451	.	-	.	ID=gene-C9F04_RS03300;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F04_RS03300;old_locus_tag=C9F04_03405
NZ_PYKF01000156.1	Protein Homology	CDS	1580	3451	.	-	0	ID=cds-WP_146712289.1;Parent=gene-C9F04_RS03300;Dbxref=Genbank:WP_146712289.1;Name=WP_146712289.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F04_RS03300;product=penicillin-binding protein 2;protein_id=WP_146712289.1;transl_table=11
NZ_PYKF01000156.1	RefSeq	pseudogene	3640	5373	.	-	.	ID=gene-C9F04_RS03305;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=C9F04_RS03305;old_locus_tag=C9F04_03410;pseudo=true
NZ_PYKF01000156.1	Protein Homology	CDS	3640	5373	.	-	0	ID=cds-C9F04_RS03305;Parent=gene-C9F04_RS03305;Note=internal stop;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9F04_RS03305;product=arginine--tRNA ligase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000425.1 1 5435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000425.1	RefSeq	region	1	5435	.	+	.	ID=NZ_PYKF01000425.1:1..5435;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000425.1	RefSeq	gene	1	562	.	-	.	ID=gene-C9F04_RS12765;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9F04_RS12765;old_locus_tag=C9F04_13185;partial=true;start_range=.,1
NZ_PYKF01000425.1	Protein Homology	CDS	1	562	.	-	0	ID=cds-WP_146712715.1;Parent=gene-C9F04_RS12765;Dbxref=Genbank:WP_146712715.1;Name=WP_146712715.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F04_RS12765;partial=true;product=HTH-type transcriptional regulator YidZ;protein_id=WP_146712715.1;start_range=.,1;transl_table=11
NZ_PYKF01000425.1	RefSeq	gene	531	1718	.	-	.	ID=gene-C9F04_RS12770;Name=C9F04_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12770;old_locus_tag=C9F04_13190
NZ_PYKF01000425.1	Protein Homology	CDS	531	1718	.	-	0	ID=cds-WP_000819609.1;Parent=gene-C9F04_RS12770;Dbxref=Genbank:WP_000819609.1;Name=WP_000819609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=C9F04_RS12770;product=MFS transporter;protein_id=WP_000819609.1;transl_table=11
NZ_PYKF01000425.1	RefSeq	gene	1901	3265	.	-	.	ID=gene-C9F04_RS12775;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9F04_RS12775;old_locus_tag=C9F04_13195
NZ_PYKF01000425.1	Protein Homology	CDS	1901	3265	.	-	0	ID=cds-WP_146712716.1;Parent=gene-C9F04_RS12775;Dbxref=Genbank:WP_146712716.1;Name=WP_146712716.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9F04_RS12775;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_146712716.1;transl_table=11
NZ_PYKF01000425.1	RefSeq	gene	3406	5052	.	-	.	ID=gene-C9F04_RS12780;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9F04_RS12780;old_locus_tag=C9F04_13200
NZ_PYKF01000425.1	Protein Homology	CDS	3406	5052	.	-	0	ID=cds-WP_146712717.1;Parent=gene-C9F04_RS12780;Dbxref=Genbank:WP_146712717.1;Name=WP_146712717.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9F04_RS12780;product=membrane protein insertase YidC;protein_id=WP_146712717.1;transl_table=11
NZ_PYKF01000425.1	RefSeq	gene	5055	5312	.	-	.	ID=gene-C9F04_RS12785;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9F04_RS12785;old_locus_tag=C9F04_13205
NZ_PYKF01000425.1	Protein Homology	CDS	5055	5312	.	-	0	ID=cds-WP_001307474.1;Parent=gene-C9F04_RS12785;Dbxref=Genbank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9F04_RS12785;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_PYKF01000425.1	RefSeq	gene	5276	5435	.	-	.	ID=gene-C9F04_RS12790;Name=rnpA;end_range=5435,.;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9F04_RS12790;old_locus_tag=C9F04_13210;partial=true
NZ_PYKF01000425.1	Protein Homology	CDS	5276	5435	.	-	1	ID=cds-WP_146712718.1;Parent=gene-C9F04_RS12790;Dbxref=Genbank:WP_146712718.1;Name=WP_146712718.1;Ontology_term=GO:0006396,GO:0004526;end_range=5435,.;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9F04_RS12790;partial=true;product=ribonuclease P protein component;protein_id=WP_146712718.1;transl_table=11
##sequence-region NZ_PYKF01000769.1 1 5434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000769.1	RefSeq	region	1	5434	.	+	.	ID=NZ_PYKF01000769.1:1..5434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000769.1	RefSeq	pseudogene	1	700	.	-	.	ID=gene-C9F04_RS23860;Name=C9F04_RS23860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23860;old_locus_tag=C9F04_24660;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000769.1	Protein Homology	CDS	1	700	.	-	0	ID=cds-C9F04_RS23860;Parent=gene-C9F04_RS23860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9F04_RS23860;partial=true;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000769.1	RefSeq	gene	1224	1940	.	-	.	ID=gene-C9F04_RS23865;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9F04_RS23865;old_locus_tag=C9F04_24665
NZ_PYKF01000769.1	Protein Homology	CDS	1224	1940	.	-	0	ID=cds-WP_001537859.1;Parent=gene-C9F04_RS23865;Dbxref=Genbank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9F04_RS23865;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11
NZ_PYKF01000769.1	RefSeq	gene	1957	3723	.	-	.	ID=gene-C9F04_RS23870;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9F04_RS23870;old_locus_tag=C9F04_24670
NZ_PYKF01000769.1	Protein Homology	CDS	1957	3723	.	-	0	ID=cds-WP_146713271.1;Parent=gene-C9F04_RS23870;Dbxref=Genbank:WP_146713271.1;Name=WP_146713271.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9F04_RS23870;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_146713271.1;transl_table=11
NZ_PYKF01000769.1	RefSeq	gene	3723	4070	.	-	.	ID=gene-C9F04_RS23875;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9F04_RS23875;old_locus_tag=C9F04_24675
NZ_PYKF01000769.1	Protein Homology	CDS	3723	4070	.	-	0	ID=cds-WP_000254356.1;Parent=gene-C9F04_RS23875;Dbxref=Genbank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9F04_RS23875;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11
NZ_PYKF01000769.1	RefSeq	gene	4064	4468	.	-	.	ID=gene-C9F04_RS23880;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9F04_RS23880;old_locus_tag=C9F04_24680
NZ_PYKF01000769.1	Protein Homology	CDS	4064	4468	.	-	0	ID=cds-WP_000263340.1;Parent=gene-C9F04_RS23880;Dbxref=Genbank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9F04_RS23880;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11
NZ_PYKF01000769.1	RefSeq	gene	4862	5107	.	-	.	ID=gene-C9F04_RS26700;Name=C9F04_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26700
NZ_PYKF01000769.1	GeneMarkS-2+	CDS	4862	5107	.	-	0	ID=cds-WP_167850404.1;Parent=gene-C9F04_RS26700;Dbxref=Genbank:WP_167850404.1;Name=WP_167850404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26700;product=hypothetical protein;protein_id=WP_167850404.1;transl_table=11
NZ_PYKF01000769.1	RefSeq	pseudogene	5208	5434	.	+	.	ID=gene-C9F04_RS23885;Name=gltA;end_range=5434,.;gbkey=Gene;gene=gltA;gene_biotype=pseudogene;locus_tag=C9F04_RS23885;old_locus_tag=C9F04_24695;partial=true;pseudo=true
NZ_PYKF01000769.1	Protein Homology	CDS	5208	5434	.	+	0	ID=cds-C9F04_RS23885;Parent=gene-C9F04_RS23885;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5434,.;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9F04_RS23885;partial=true;product=citrate (Si)-synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000358.1 1 5418
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000358.1	RefSeq	region	1	5418	.	+	.	ID=NZ_PYKF01000358.1:1..5418;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000358.1	RefSeq	gene	1	371	.	-	.	ID=gene-C9F04_RS10555;Name=C9F04_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10555;old_locus_tag=C9F04_10890;partial=true;start_range=.,1
NZ_PYKF01000358.1	Protein Homology	CDS	1	371	.	-	0	ID=cds-WP_261770822.1;Parent=gene-C9F04_RS10555;Dbxref=Genbank:WP_261770822.1;Name=WP_261770822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F04_RS10555;partial=true;product=condensation domain-containing protein;protein_id=WP_261770822.1;start_range=.,1;transl_table=11
NZ_PYKF01000358.1	RefSeq	gene	368	586	.	-	.	ID=gene-C9F04_RS10560;Name=C9F04_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10560;old_locus_tag=C9F04_10895
NZ_PYKF01000358.1	Protein Homology	CDS	368	586	.	-	0	ID=cds-WP_000396006.1;Parent=gene-C9F04_RS10560;Dbxref=Genbank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9F04_RS10560;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11
NZ_PYKF01000358.1	RefSeq	gene	617	1831	.	-	.	ID=gene-C9F04_RS10565;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9F04_RS10565;old_locus_tag=C9F04_10900
NZ_PYKF01000358.1	Protein Homology	CDS	617	1831	.	-	0	ID=cds-WP_000656600.1;Parent=gene-C9F04_RS10565;Dbxref=Genbank:WP_000656600.1;Name=WP_000656600.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F04_RS10565;product=enterochelin esterase;protein_id=WP_000656600.1;transl_table=11
NZ_PYKF01000358.1	RefSeq	gene	2020	4275	.	+	.	ID=gene-C9F04_RS10570;Name=C9F04_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10570;old_locus_tag=C9F04_10905
NZ_PYKF01000358.1	Protein Homology	CDS	2020	4275	.	+	0	ID=cds-WP_017466026.1;Parent=gene-C9F04_RS10570;Dbxref=Genbank:WP_017466026.1;Name=WP_017466026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9F04_RS10570;product=TonB-dependent siderophore receptor;protein_id=WP_017466026.1;transl_table=11
NZ_PYKF01000358.1	RefSeq	gene	4322	5026	.	+	.	ID=gene-C9F04_RS10575;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9F04_RS10575;old_locus_tag=C9F04_10910
NZ_PYKF01000358.1	Protein Homology	CDS	4322	5026	.	+	0	ID=cds-WP_135369289.1;Parent=gene-C9F04_RS10575;Dbxref=Genbank:WP_135369289.1;Name=WP_135369289.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9F04_RS10575;product=enterobactin synthase subunit EntD;protein_id=WP_135369289.1;transl_table=11
NZ_PYKF01000358.1	RefSeq	pseudogene	5038	5418	.	+	.	ID=gene-C9F04_RS10580;Name=C9F04_RS10580;end_range=5418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10580;old_locus_tag=C9F04_10915;partial=true;pseudo=true
NZ_PYKF01000358.1	Protein Homology	CDS	5038	5418	.	+	0	ID=cds-C9F04_RS10580;Parent=gene-C9F04_RS10580;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0042398,GO:0004357;end_range=5418,.;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9F04_RS10580;partial=true;product=glutamate-cysteine ligase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000060.1 1 5416
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000060.1	RefSeq	region	1	5416	.	+	.	ID=NZ_PYKF01000060.1:1..5416;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000060.1	RefSeq	pseudogene	1	170	.	-	.	ID=gene-C9F04_RS01150;Name=C9F04_RS01150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01150;old_locus_tag=C9F04_01215;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000060.1	Protein Homology	CDS	1	170	.	-	0	ID=cds-C9F04_RS01150;Parent=gene-C9F04_RS01150;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9F04_RS01150;partial=true;product=5-formyltetrahydrofolate cyclo-ligase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000060.1	RefSeq	gene	191	374	.	-	.	ID=gene-C9F04_RS01155;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9F04_RS01155;old_locus_tag=C9F04_01220
NZ_PYKF01000060.1	cmsearch	ncRNA	191	374	.	-	.	ID=rna-C9F04_RS01155;Parent=gene-C9F04_RS01155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS01155;product=6S RNA
NZ_PYKF01000060.1	cmsearch	exon	191	374	.	-	.	ID=exon-C9F04_RS01155-1;Parent=rna-C9F04_RS01155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS01155;product=6S RNA
NZ_PYKF01000060.1	RefSeq	gene	416	745	.	-	.	ID=gene-C9F04_RS01160;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9F04_RS01160;old_locus_tag=C9F04_01225
NZ_PYKF01000060.1	Protein Homology	CDS	416	745	.	-	0	ID=cds-WP_001276011.1;Parent=gene-C9F04_RS01160;Dbxref=Genbank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9F04_RS01160;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11
NZ_PYKF01000060.1	RefSeq	gene	912	1490	.	+	.	ID=gene-C9F04_RS01165;Name=C9F04_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01165;old_locus_tag=C9F04_01235
NZ_PYKF01000060.1	Protein Homology	CDS	912	1490	.	+	0	ID=cds-WP_000027236.1;Parent=gene-C9F04_RS01165;Dbxref=Genbank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9F04_RS01165;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11
NZ_PYKF01000060.1	RefSeq	gene	1516	2832	.	+	.	ID=gene-C9F04_RS01170;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9F04_RS01170;old_locus_tag=C9F04_01240
NZ_PYKF01000060.1	Protein Homology	CDS	1516	2832	.	+	0	ID=cds-WP_000193682.1;Parent=gene-C9F04_RS01170;Dbxref=Genbank:WP_000193682.1;Name=WP_000193682.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9F04_RS01170;product=Xaa-Pro aminopeptidase;protein_id=WP_000193682.1;transl_table=11
NZ_PYKF01000060.1	RefSeq	gene	2829	4007	.	+	.	ID=gene-C9F04_RS01175;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9F04_RS01175;old_locus_tag=C9F04_01245
NZ_PYKF01000060.1	Protein Homology	CDS	2829	4007	.	+	0	ID=cds-WP_146712179.1;Parent=gene-C9F04_RS01175;Dbxref=Genbank:WP_146712179.1;Name=WP_146712179.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9F04_RS01175;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_146712179.1;transl_table=11
NZ_PYKF01000060.1	RefSeq	gene	4133	5335	.	+	.	ID=gene-C9F04_RS01180;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9F04_RS01180;old_locus_tag=C9F04_01250
NZ_PYKF01000060.1	Protein Homology	CDS	4133	5335	.	+	0	ID=cds-WP_146712180.1;Parent=gene-C9F04_RS01180;Dbxref=Genbank:WP_146712180.1;Name=WP_146712180.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9F04_RS01180;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_146712180.1;transl_table=11
##sequence-region NZ_PYKF01000642.1 1 5385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000642.1	RefSeq	region	1	5385	.	+	.	ID=NZ_PYKF01000642.1:1..5385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000642.1	RefSeq	gene	1	1001	.	-	.	ID=gene-C9F04_RS19700;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F04_RS19700;old_locus_tag=C9F04_20335;partial=true;start_range=.,1
NZ_PYKF01000642.1	Protein Homology	CDS	1	1001	.	-	0	ID=cds-WP_146713056.1;Parent=gene-C9F04_RS19700;Dbxref=Genbank:WP_146713056.1;Name=WP_146713056.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F04_RS19700;partial=true;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_146713056.1;start_range=.,1;transl_table=11
NZ_PYKF01000642.1	RefSeq	gene	1253	1876	.	-	.	ID=gene-C9F04_RS19705;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9F04_RS19705;old_locus_tag=C9F04_20340
NZ_PYKF01000642.1	Protein Homology	CDS	1253	1876	.	-	0	ID=cds-WP_000122257.1;Parent=gene-C9F04_RS19705;Dbxref=Genbank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9F04_RS19705;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11
NZ_PYKF01000642.1	RefSeq	gene	2123	3421	.	-	.	ID=gene-C9F04_RS19710;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9F04_RS19710;old_locus_tag=C9F04_20345
NZ_PYKF01000642.1	Protein Homology	CDS	2123	3421	.	-	0	ID=cds-WP_001198403.1;Parent=gene-C9F04_RS19710;Dbxref=Genbank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9F04_RS19710;product=trigger factor;protein_id=WP_001198403.1;transl_table=11
NZ_PYKF01000642.1	RefSeq	gene	3768	4085	.	-	.	ID=gene-C9F04_RS19720;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9F04_RS19720;old_locus_tag=C9F04_20355
NZ_PYKF01000642.1	Protein Homology	CDS	3768	4085	.	-	0	ID=cds-WP_000973433.1;Parent=gene-C9F04_RS19720;Dbxref=Genbank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9F04_RS19720;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11
NZ_PYKF01000642.1	RefSeq	gene	4389	4967	.	+	.	ID=gene-C9F04_RS19725;Name=C9F04_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19725;old_locus_tag=C9F04_20365
NZ_PYKF01000642.1	Protein Homology	CDS	4389	4967	.	+	0	ID=cds-WP_135369702.1;Parent=gene-C9F04_RS19725;Dbxref=Genbank:WP_135369702.1;Name=WP_135369702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9F04_RS19725;product=lipoprotein;protein_id=WP_135369702.1;transl_table=11
NZ_PYKF01000642.1	RefSeq	pseudogene	5011	5385	.	+	.	ID=gene-C9F04_RS19730;Name=ampG;end_range=5385,.;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=C9F04_RS19730;old_locus_tag=C9F04_20370;partial=true;pseudo=true
NZ_PYKF01000642.1	Protein Homology	CDS	5011	5385	.	+	0	ID=cds-C9F04_RS19730;Parent=gene-C9F04_RS19730;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5385,.;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9F04_RS19730;partial=true;product=muropeptide MFS transporter AmpG;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000748.1 1 5374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000748.1	RefSeq	region	1	5374	.	+	.	ID=NZ_PYKF01000748.1:1..5374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000748.1	RefSeq	gene	1	142	.	+	.	ID=gene-C9F04_RS23215;Name=C9F04_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23215;old_locus_tag=C9F04_23985;partial=true;start_range=.,1
NZ_PYKF01000748.1	Protein Homology	CDS	1	142	.	+	1	ID=cds-WP_186799086.1;Parent=gene-C9F04_RS23215;Dbxref=Genbank:WP_186799086.1;Name=WP_186799086.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9F04_RS23215;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_186799086.1;start_range=.,1;transl_table=11
NZ_PYKF01000748.1	RefSeq	gene	322	1143	.	+	.	ID=gene-C9F04_RS23220;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9F04_RS23220;old_locus_tag=C9F04_23990
NZ_PYKF01000748.1	Protein Homology	CDS	322	1143	.	+	0	ID=cds-WP_000544032.1;Parent=gene-C9F04_RS23220;Dbxref=Genbank:WP_000544032.1;Name=WP_000544032.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9F04_RS23220;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544032.1;transl_table=11
NZ_PYKF01000748.1	RefSeq	gene	2007	3155	.	+	.	ID=gene-C9F04_RS23230;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9F04_RS23230;old_locus_tag=C9F04_24000
NZ_PYKF01000748.1	Protein Homology	CDS	2007	3155	.	+	0	ID=cds-WP_135369437.1;Parent=gene-C9F04_RS23230;Dbxref=Genbank:WP_135369437.1;Name=WP_135369437.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9F04_RS23230;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_135369437.1;transl_table=11
NZ_PYKF01000748.1	RefSeq	pseudogene	3174	5315	.	+	.	ID=gene-C9F04_RS23235;Name=carB;end_range=5315,.;gbkey=Gene;gene=carB;gene_biotype=pseudogene;locus_tag=C9F04_RS23235;old_locus_tag=C9F04_24005;partial=true;pseudo=true
NZ_PYKF01000748.1	Protein Homology	CDS	3174	5315	.	+	0	ID=cds-C9F04_RS23235;Parent=gene-C9F04_RS23235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006807,GO:0005524,GO:0046872;end_range=5315,.;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9F04_RS23235;partial=true;product=carbamoyl-phosphate synthase large subunit;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000420.1 1 5335
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000420.1	RefSeq	region	1	5335	.	+	.	ID=NZ_PYKF01000420.1:1..5335;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000420.1	RefSeq	gene	1	652	.	-	.	ID=gene-C9F04_RS12465;Name=C9F04_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12465;old_locus_tag=C9F04_12885;partial=true;start_range=.,1
NZ_PYKF01000420.1	Protein Homology	CDS	1	652	.	-	0	ID=cds-WP_146712695.1;Parent=gene-C9F04_RS12465;Dbxref=Genbank:WP_146712695.1;Name=WP_146712695.1;Ontology_term=GO:0019645,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435796.1;locus_tag=C9F04_RS12465;partial=true;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_146712695.1;start_range=.,1;transl_table=11
NZ_PYKF01000420.1	RefSeq	gene	645	1271	.	-	.	ID=gene-C9F04_RS12470;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F04_RS12470;old_locus_tag=C9F04_12890
NZ_PYKF01000420.1	Protein Homology	CDS	645	1271	.	-	0	ID=cds-WP_000816143.1;Parent=gene-C9F04_RS12470;Dbxref=Genbank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9F04_RS12470;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000816143.1;transl_table=11
NZ_PYKF01000420.1	RefSeq	gene	1285	3714	.	-	.	ID=gene-C9F04_RS12475;Name=C9F04_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12475;old_locus_tag=C9F04_12895
NZ_PYKF01000420.1	Protein Homology	CDS	1285	3714	.	-	0	ID=cds-WP_146712696.1;Parent=gene-C9F04_RS12475;Dbxref=Genbank:WP_146712696.1;Name=WP_146712696.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9F04_RS12475;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146712696.1;transl_table=11
NZ_PYKF01000420.1	RefSeq	gene	4089	5335	.	+	.	ID=gene-C9F04_RS12480;Name=dcuS;end_range=5335,.;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=C9F04_RS12480;old_locus_tag=C9F04_12900;partial=true
NZ_PYKF01000420.1	Protein Homology	CDS	4089	5335	.	+	0	ID=cds-WP_146712697.1;Parent=gene-C9F04_RS12480;Dbxref=Genbank:WP_146712697.1;Name=WP_146712697.1;Ontology_term=GO:0000160,GO:0006355,GO:0000155;end_range=5335,.;gbkey=CDS;gene=dcuS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9F04_RS12480;partial=true;product=DcuS/MalK family sensor histidine kinase;protein_id=WP_146712697.1;transl_table=11
##sequence-region NZ_PYKF01000685.1 1 5325
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000685.1	RefSeq	region	1	5325	.	+	.	ID=NZ_PYKF01000685.1:1..5325;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000685.1	RefSeq	gene	1	1097	.	+	.	ID=gene-C9F04_RS21165;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=C9F04_RS21165;old_locus_tag=C9F04_21855;partial=true;start_range=.,1
NZ_PYKF01000685.1	Protein Homology	CDS	1	1097	.	+	2	ID=cds-WP_146713130.1;Parent=gene-C9F04_RS21165;Dbxref=Genbank:WP_146713130.1;Name=WP_146713130.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9F04_RS21165;partial=true;product=citrate synthase;protein_id=WP_146713130.1;start_range=.,1;transl_table=11
NZ_PYKF01000685.1	RefSeq	gene	1233	2279	.	+	.	ID=gene-C9F04_RS21170;Name=C9F04_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21170;old_locus_tag=C9F04_21860
NZ_PYKF01000685.1	Protein Homology	CDS	1233	2279	.	+	0	ID=cds-WP_024156732.1;Parent=gene-C9F04_RS21170;Dbxref=Genbank:WP_024156732.1;Name=WP_024156732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9F04_RS21170;product=AbrB family transcriptional regulator;protein_id=WP_024156732.1;transl_table=11
NZ_PYKF01000685.1	RefSeq	gene	2334	3125	.	-	.	ID=gene-C9F04_RS21175;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9F04_RS21175;old_locus_tag=C9F04_21865
NZ_PYKF01000685.1	Protein Homology	CDS	2334	3125	.	-	0	ID=cds-WP_135369771.1;Parent=gene-C9F04_RS21175;Dbxref=Genbank:WP_135369771.1;Name=WP_135369771.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9F04_RS21175;product=endonuclease VIII;protein_id=WP_135369771.1;transl_table=11
NZ_PYKF01000685.1	RefSeq	gene	3174	3311	.	-	.	ID=gene-C9F04_RS21180;Name=C9F04_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21180;old_locus_tag=C9F04_21870
NZ_PYKF01000685.1	Protein Homology	CDS	3174	3311	.	-	0	ID=cds-WP_001519950.1;Parent=gene-C9F04_RS21180;Dbxref=Genbank:WP_001519950.1;Name=WP_001519950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=C9F04_RS21180;product=hypothetical protein;protein_id=WP_001519950.1;transl_table=11
NZ_PYKF01000685.1	RefSeq	gene	3379	5274	.	-	.	ID=gene-C9F04_RS21185;Name=C9F04_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21185;old_locus_tag=C9F04_21875
NZ_PYKF01000685.1	Protein Homology	CDS	3379	5274	.	-	0	ID=cds-WP_135419939.1;Parent=gene-C9F04_RS21185;Dbxref=Genbank:WP_135419939.1;Name=WP_135419939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=C9F04_RS21185;product=glycosyl transferase;protein_id=WP_135419939.1;transl_table=11
##sequence-region NZ_PYKF01000704.1 1 5319
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000704.1	RefSeq	region	1	5319	.	+	.	ID=NZ_PYKF01000704.1:1..5319;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000704.1	RefSeq	pseudogene	1	261	.	-	.	ID=gene-C9F04_RS21860;Name=C9F04_RS21860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21860;old_locus_tag=C9F04_22590;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000704.1	Protein Homology	CDS	1	261	.	-	0	ID=cds-C9F04_RS21860;Parent=gene-C9F04_RS21860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9F04_RS21860;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	258	551	.	-	.	ID=gene-C9F04_RS21865;Name=C9F04_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21865;old_locus_tag=C9F04_22595
NZ_PYKF01000704.1	Protein Homology	CDS	258	551	.	-	0	ID=cds-WP_001110450.1;Parent=gene-C9F04_RS21865;Dbxref=Genbank:WP_001110450.1;Name=WP_001110450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9F04_RS21865;product=DUF1778 domain-containing protein;protein_id=WP_001110450.1;transl_table=11
NZ_PYKF01000704.1	RefSeq	pseudogene	868	1090	.	+	.	ID=gene-C9F04_RS27215;Name=C9F04_RS27215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27215;old_locus_tag=C9F04_22600;pseudo=true
NZ_PYKF01000704.1	Protein Homology	CDS	868	1090	.	+	0	ID=cds-C9F04_RS27215;Parent=gene-C9F04_RS27215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9F04_RS27215;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	1355	2230	.	+	.	ID=gene-C9F04_RS21875;Name=C9F04_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21875;old_locus_tag=C9F04_22605
NZ_PYKF01000704.1	Protein Homology	CDS	1355	2230	.	+	0	ID=cds-WP_000921674.1;Parent=gene-C9F04_RS21875;Dbxref=Genbank:WP_000921674.1;Name=WP_000921674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9F04_RS21875;product=AraC family transcriptional regulator;protein_id=WP_000921674.1;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	2227	2514	.	+	.	ID=gene-C9F04_RS21880;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9F04_RS21880;old_locus_tag=C9F04_22610
NZ_PYKF01000704.1	Protein Homology	CDS	2227	2514	.	+	0	ID=cds-WP_001269916.1;Parent=gene-C9F04_RS21880;Dbxref=Genbank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9F04_RS21880;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	2507	2689	.	-	.	ID=gene-C9F04_RS27220;Name=C9F04_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27220;old_locus_tag=C9F04_22615
NZ_PYKF01000704.1	Protein Homology	CDS	2507	2689	.	-	0	ID=cds-WP_001527266.1;Parent=gene-C9F04_RS27220;Dbxref=Genbank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=C9F04_RS27220;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11
NZ_PYKF01000704.1	RefSeq	pseudogene	2709	2808	.	+	.	ID=gene-C9F04_RS27225;Name=C9F04_RS27225;end_range=2808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27225;partial=true;pseudo=true
NZ_PYKF01000704.1	Protein Homology	CDS	2709	2808	.	+	0	ID=cds-C9F04_RS27225;Parent=gene-C9F04_RS27225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=C9F04_RS27225;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000704.1	RefSeq	pseudogene	2919	3050	.	+	.	ID=gene-C9F04_RS27230;Name=C9F04_RS27230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27230;partial=true;pseudo=true;start_range=.,2919
NZ_PYKF01000704.1	Protein Homology	CDS	2919	3050	.	+	0	ID=cds-C9F04_RS27230;Parent=gene-C9F04_RS27230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9F04_RS27230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2919;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	3344	4249	.	-	.	ID=gene-C9F04_RS21895;Name=C9F04_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21895;old_locus_tag=C9F04_22625
NZ_PYKF01000704.1	Protein Homology	CDS	3344	4249	.	-	0	ID=cds-WP_001268195.1;Parent=gene-C9F04_RS21895;Dbxref=Genbank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9F04_RS21895;product=YjiK family protein;protein_id=WP_001268195.1;transl_table=11
NZ_PYKF01000704.1	RefSeq	gene	4553	5319	.	+	.	ID=gene-C9F04_RS21900;Name=C9F04_RS21900;end_range=5319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21900;old_locus_tag=C9F04_22630;partial=true
NZ_PYKF01000704.1	Protein Homology	CDS	4553	5319	.	+	0	ID=cds-WP_146713167.1;Parent=gene-C9F04_RS21900;Dbxref=Genbank:WP_146713167.1;Name=WP_146713167.1;end_range=5319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9F04_RS21900;partial=true;product=DUF1996 domain-containing protein;protein_id=WP_146713167.1;transl_table=11
##sequence-region NZ_PYKF01000281.1 1 19633
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000281.1	RefSeq	region	1	19633	.	+	.	ID=NZ_PYKF01000281.1:1..19633;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000281.1	RefSeq	gene	1	4127	.	+	.	ID=gene-C9F04_RS08000;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9F04_RS08000;old_locus_tag=C9F04_08270;partial=true;start_range=.,1
NZ_PYKF01000281.1	Protein Homology	CDS	1	4127	.	+	2	ID=cds-WP_146712491.1;Parent=gene-C9F04_RS08000;Dbxref=Genbank:WP_146712491.1;Name=WP_146712491.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9F04_RS08000;partial=true;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_146712491.1;start_range=.,1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	4169	4495	.	+	.	ID=gene-C9F04_RS08005;Name=C9F04_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08005;old_locus_tag=C9F04_08275
NZ_PYKF01000281.1	Protein Homology	CDS	4169	4495	.	+	0	ID=cds-WP_015675457.1;Parent=gene-C9F04_RS08005;Dbxref=Genbank:WP_015675457.1;Name=WP_015675457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=C9F04_RS08005;product=hypothetical protein;protein_id=WP_015675457.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	4497	4841	.	-	.	ID=gene-C9F04_RS08010;Name=C9F04_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08010;old_locus_tag=C9F04_08280
NZ_PYKF01000281.1	Protein Homology	CDS	4497	4841	.	-	0	ID=cds-WP_135420100.1;Parent=gene-C9F04_RS08010;Dbxref=Genbank:WP_135420100.1;Name=WP_135420100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9F04_RS08010;product=cytoplasmic protein;protein_id=WP_135420100.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	pseudogene	5252	5436	.	+	.	ID=gene-C9F04_RS08015;Name=C9F04_RS08015;end_range=5436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08015;old_locus_tag=C9F04_08285;partial=true;pseudo=true
NZ_PYKF01000281.1	Protein Homology	CDS	5252	5436	.	+	0	ID=cds-C9F04_RS08015;Parent=gene-C9F04_RS08015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=C9F04_RS08015;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	5590	6723	.	-	.	ID=gene-C9F04_RS08020;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9F04_RS08020;old_locus_tag=C9F04_08290
NZ_PYKF01000281.1	Protein Homology	CDS	5590	6723	.	-	0	ID=cds-WP_135369424.1;Parent=gene-C9F04_RS08020;Dbxref=Genbank:WP_135369424.1;Name=WP_135369424.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9F04_RS08020;product=2-iminoacetate synthase ThiH;protein_id=WP_135369424.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	6720	7490	.	-	.	ID=gene-C9F04_RS08025;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9F04_RS08025;old_locus_tag=C9F04_08295
NZ_PYKF01000281.1	Protein Homology	CDS	6720	7490	.	-	0	ID=cds-WP_052932743.1;Parent=gene-C9F04_RS08025;Dbxref=Genbank:WP_052932743.1;Name=WP_052932743.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9F04_RS08025;product=thiazole synthase;protein_id=WP_052932743.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	7492	7692	.	-	.	ID=gene-C9F04_RS08030;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9F04_RS08030;old_locus_tag=C9F04_08300
NZ_PYKF01000281.1	Protein Homology	CDS	7492	7692	.	-	0	ID=cds-WP_001166842.1;Parent=gene-C9F04_RS08030;Dbxref=Genbank:WP_001166842.1;Name=WP_001166842.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9F04_RS08030;product=sulfur carrier protein ThiS;protein_id=WP_001166842.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	7673	8431	.	-	.	ID=gene-C9F04_RS08035;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=C9F04_RS08035;old_locus_tag=C9F04_08305
NZ_PYKF01000281.1	Protein Homology	CDS	7673	8431	.	-	0	ID=cds-WP_135369425.1;Parent=gene-C9F04_RS08035;Dbxref=Genbank:WP_135369425.1;Name=WP_135369425.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9F04_RS08035;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_135369425.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	8424	9059	.	-	.	ID=gene-C9F04_RS08040;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9F04_RS08040;old_locus_tag=C9F04_08310
NZ_PYKF01000281.1	Protein Homology	CDS	8424	9059	.	-	0	ID=cds-WP_135369426.1;Parent=gene-C9F04_RS08040;Dbxref=Genbank:WP_135369426.1;Name=WP_135369426.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9F04_RS08040;product=thiamine phosphate synthase;protein_id=WP_135369426.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	9059	10954	.	-	.	ID=gene-C9F04_RS08045;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9F04_RS08045;old_locus_tag=C9F04_08315
NZ_PYKF01000281.1	Protein Homology	CDS	9059	10954	.	-	0	ID=cds-WP_146712492.1;Parent=gene-C9F04_RS08045;Dbxref=Genbank:WP_146712492.1;Name=WP_146712492.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=C9F04_RS08045;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_146712492.1;transl_table=11
NZ_PYKF01000281.1	cmsearch	riboswitch	11040	11203	.	-	.	ID=id-NZ_PYKF01000281.1:11040..11203;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000281.1	RefSeq	gene	11319	11807	.	-	.	ID=gene-C9F04_RS08050;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9F04_RS08050;old_locus_tag=C9F04_08320
NZ_PYKF01000281.1	Protein Homology	CDS	11319	11807	.	-	0	ID=cds-WP_000934315.1;Parent=gene-C9F04_RS08050;Dbxref=Genbank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9F04_RS08050;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	11900	12673	.	+	.	ID=gene-C9F04_RS08055;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9F04_RS08055;old_locus_tag=C9F04_08325
NZ_PYKF01000281.1	Protein Homology	CDS	11900	12673	.	+	0	ID=cds-WP_135369428.1;Parent=gene-C9F04_RS08055;Dbxref=Genbank:WP_135369428.1;Name=WP_135369428.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9F04_RS08055;product=NAD(+) diphosphatase;protein_id=WP_135369428.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	12714	13778	.	+	.	ID=gene-C9F04_RS08060;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9F04_RS08060;old_locus_tag=C9F04_08330
NZ_PYKF01000281.1	Protein Homology	CDS	12714	13778	.	+	0	ID=cds-WP_135369429.1;Parent=gene-C9F04_RS08060;Dbxref=Genbank:WP_135369429.1;Name=WP_135369429.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9F04_RS08060;product=uroporphyrinogen decarboxylase;protein_id=WP_135369429.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	13788	14459	.	+	.	ID=gene-C9F04_RS08065;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9F04_RS08065;old_locus_tag=C9F04_08335
NZ_PYKF01000281.1	Protein Homology	CDS	13788	14459	.	+	0	ID=cds-WP_000362363.1;Parent=gene-C9F04_RS08065;Dbxref=Genbank:WP_000362363.1;Name=WP_000362363.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9F04_RS08065;product=deoxyribonuclease V;protein_id=WP_000362363.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	14501	15091	.	+	.	ID=gene-C9F04_RS08070;Name=C9F04_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08070;old_locus_tag=C9F04_08340
NZ_PYKF01000281.1	Protein Homology	CDS	14501	15091	.	+	0	ID=cds-WP_000940092.1;Parent=gene-C9F04_RS08070;Dbxref=Genbank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9F04_RS08070;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	15278	15550	.	+	.	ID=gene-C9F04_RS08075;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9F04_RS08075;old_locus_tag=C9F04_08345
NZ_PYKF01000281.1	Protein Homology	CDS	15278	15550	.	+	0	ID=cds-WP_001044509.1;Parent=gene-C9F04_RS08075;Dbxref=Genbank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9F04_RS08075;product=DNA-binding protein HU-alpha;protein_id=WP_001044509.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	15562	16254	.	+	.	ID=gene-C9F04_RS08080;Name=C9F04_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08080;old_locus_tag=C9F04_08350
NZ_PYKF01000281.1	Protein Homology	CDS	15562	16254	.	+	0	ID=cds-WP_001083940.1;Parent=gene-C9F04_RS08080;Dbxref=Genbank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9F04_RS08080;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	16296	16751	.	-	.	ID=gene-C9F04_RS08085;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9F04_RS08085;old_locus_tag=C9F04_08355
NZ_PYKF01000281.1	Protein Homology	CDS	16296	16751	.	-	0	ID=cds-WP_135369430.1;Parent=gene-C9F04_RS08085;Dbxref=Genbank:WP_135369430.1;Name=WP_135369430.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9F04_RS08085;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_135369430.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	gene	17005	18402	.	+	.	ID=gene-C9F04_RS08090;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9F04_RS08090;old_locus_tag=C9F04_08360
NZ_PYKF01000281.1	Protein Homology	CDS	17005	18402	.	+	0	ID=cds-WP_146712493.1;Parent=gene-C9F04_RS08090;Dbxref=Genbank:WP_146712493.1;Name=WP_146712493.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9F04_RS08090;product=two-component system sensor histidine kinase ZraS;protein_id=WP_146712493.1;transl_table=11
NZ_PYKF01000281.1	RefSeq	pseudogene	18408	19633	.	+	.	ID=gene-C9F04_RS08095;Name=zraR;end_range=19633,.;gbkey=Gene;gene=zraR;gene_biotype=pseudogene;locus_tag=C9F04_RS08095;old_locus_tag=C9F04_08365;partial=true;pseudo=true
NZ_PYKF01000281.1	Protein Homology	CDS	18408	19633	.	+	0	ID=cds-C9F04_RS08095;Parent=gene-C9F04_RS08095;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0043565;end_range=19633,.;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9F04_RS08095;partial=true;product=sigma-54-dependent response regulator transcription factor ZraR;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000223.1 1 5301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000223.1	RefSeq	region	1	5301	.	+	.	ID=NZ_PYKF01000223.1:1..5301;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000223.1	RefSeq	gene	1	903	.	-	.	ID=gene-C9F04_RS05695;Name=C9F04_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05695;old_locus_tag=C9F04_05875;partial=true;start_range=.,1
NZ_PYKF01000223.1	Protein Homology	CDS	1	903	.	-	0	ID=cds-WP_186799002.1;Parent=gene-C9F04_RS05695;Dbxref=Genbank:WP_186799002.1;Name=WP_186799002.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9F04_RS05695;partial=true;product=PDZ domain-containing protein;protein_id=WP_186799002.1;start_range=.,1;transl_table=11
NZ_PYKF01000223.1	RefSeq	gene	923	1609	.	-	.	ID=gene-C9F04_RS05700;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9F04_RS05700;old_locus_tag=C9F04_05880
NZ_PYKF01000223.1	Protein Homology	CDS	923	1609	.	-	0	ID=cds-WP_000431401.1;Parent=gene-C9F04_RS05700;Dbxref=Genbank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9F04_RS05700;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11
NZ_PYKF01000223.1	RefSeq	gene	1707	2204	.	-	.	ID=gene-C9F04_RS05705;Name=C9F04_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05705;old_locus_tag=C9F04_05885
NZ_PYKF01000223.1	Protein Homology	CDS	1707	2204	.	-	0	ID=cds-WP_001518229.1;Parent=gene-C9F04_RS05705;Dbxref=Genbank:WP_001518229.1;Name=WP_001518229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9F04_RS05705;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11
NZ_PYKF01000223.1	RefSeq	gene	2333	3616	.	+	.	ID=gene-C9F04_RS05710;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9F04_RS05710;old_locus_tag=C9F04_05890
NZ_PYKF01000223.1	Protein Homology	CDS	2333	3616	.	+	0	ID=cds-WP_146712397.1;Parent=gene-C9F04_RS05710;Dbxref=Genbank:WP_146712397.1;Name=WP_146712397.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9F04_RS05710;product=membrane integrity lipid transport subunit YebS;protein_id=WP_146712397.1;transl_table=11
NZ_PYKF01000223.1	RefSeq	gene	3585	5301	.	+	.	ID=gene-C9F04_RS05715;Name=C9F04_RS05715;end_range=5301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05715;old_locus_tag=C9F04_05895;partial=true
NZ_PYKF01000223.1	Protein Homology	CDS	3585	5301	.	+	0	ID=cds-WP_186799003.1;Parent=gene-C9F04_RS05715;Dbxref=Genbank:WP_186799003.1;Name=WP_186799003.1;end_range=5301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9F04_RS05715;partial=true;product=intermembrane transport protein PqiB;protein_id=WP_186799003.1;transl_table=11
##sequence-region NZ_PYKF01000153.1 1 5219
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000153.1	RefSeq	region	1	5219	.	+	.	ID=NZ_PYKF01000153.1:1..5219;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000153.1	RefSeq	gene	478	1515	.	+	.	ID=gene-C9F04_RS03195;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9F04_RS03195;old_locus_tag=C9F04_03300
NZ_PYKF01000153.1	Protein Homology	CDS	478	1515	.	+	0	ID=cds-WP_146712284.1;Parent=gene-C9F04_RS03195;Dbxref=Genbank:WP_146712284.1;Name=WP_146712284.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9F04_RS03195;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_146712284.1;transl_table=11
NZ_PYKF01000153.1	RefSeq	gene	1515	2153	.	+	.	ID=gene-C9F04_RS03200;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9F04_RS03200;old_locus_tag=C9F04_03305
NZ_PYKF01000153.1	Protein Homology	CDS	1515	2153	.	+	0	ID=cds-WP_001028589.1;Parent=gene-C9F04_RS03200;Dbxref=Genbank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9F04_RS03200;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11
NZ_PYKF01000153.1	RefSeq	gene	2342	4408	.	+	.	ID=gene-C9F04_RS03205;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9F04_RS03205;old_locus_tag=C9F04_03310
NZ_PYKF01000153.1	Protein Homology	CDS	2342	4408	.	+	0	ID=cds-WP_146712285.1;Parent=gene-C9F04_RS03205;Dbxref=Genbank:WP_146712285.1;Name=WP_146712285.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9F04_RS03205;product=polyphosphate kinase 1;protein_id=WP_146712285.1;transl_table=11
NZ_PYKF01000153.1	RefSeq	pseudogene	4413	5219	.	+	.	ID=gene-C9F04_RS03210;Name=C9F04_RS03210;end_range=5219,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03210;old_locus_tag=C9F04_03315;partial=true;pseudo=true
NZ_PYKF01000153.1	Protein Homology	CDS	4413	5219	.	+	0	ID=cds-C9F04_RS03210;Parent=gene-C9F04_RS03210;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835121.1;locus_tag=C9F04_RS03210;partial=true;product=exopolyphosphatase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000839.1 1 5122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000839.1	RefSeq	region	1	5122	.	+	.	ID=NZ_PYKF01000839.1:1..5122;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000839.1	RefSeq	pseudogene	1	348	.	+	.	ID=gene-C9F04_RS26345;Name=C9F04_RS26345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26345;old_locus_tag=C9F04_27265;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000839.1	Protein Homology	CDS	1	348	.	+	0	ID=cds-C9F04_RS26345;Parent=gene-C9F04_RS26345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9F04_RS26345;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000839.1	RefSeq	gene	352	1521	.	+	.	ID=gene-C9F04_RS26350;Name=C9F04_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26350;old_locus_tag=C9F04_27270
NZ_PYKF01000839.1	Protein Homology	CDS	352	1521	.	+	0	ID=cds-WP_135369619.1;Parent=gene-C9F04_RS26350;Dbxref=Genbank:WP_135369619.1;Name=WP_135369619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9F04_RS26350;product=ABC transporter permease;protein_id=WP_135369619.1;transl_table=11
NZ_PYKF01000839.1	RefSeq	gene	1514	2461	.	+	.	ID=gene-C9F04_RS26355;Name=C9F04_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26355;old_locus_tag=C9F04_27275
NZ_PYKF01000839.1	Protein Homology	CDS	1514	2461	.	+	0	ID=cds-WP_146713387.1;Parent=gene-C9F04_RS26355;Dbxref=Genbank:WP_146713387.1;Name=WP_146713387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9F04_RS26355;product=ABC transporter ATP-binding protein;protein_id=WP_146713387.1;transl_table=11
NZ_PYKF01000839.1	RefSeq	gene	2445	3176	.	+	.	ID=gene-C9F04_RS26360;Name=C9F04_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26360;old_locus_tag=C9F04_27280
NZ_PYKF01000839.1	Protein Homology	CDS	2445	3176	.	+	0	ID=cds-WP_000824854.1;Parent=gene-C9F04_RS26360;Dbxref=Genbank:WP_000824854.1;Name=WP_000824854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9F04_RS26360;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11
NZ_PYKF01000839.1	RefSeq	gene	3157	3264	.	-	.	ID=gene-C9F04_RS26365;Name=C9F04_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26365;old_locus_tag=C9F04_27285
NZ_PYKF01000839.1	Protein Homology	CDS	3157	3264	.	-	0	ID=cds-WP_001261696.1;Parent=gene-C9F04_RS26365;Dbxref=Genbank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9F04_RS26365;product=protein YohO;protein_id=WP_001261696.1;transl_table=11
NZ_PYKF01000839.1	RefSeq	gene	3324	4055	.	-	.	ID=gene-C9F04_RS26370;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9F04_RS26370;old_locus_tag=C9F04_27290
NZ_PYKF01000839.1	Protein Homology	CDS	3324	4055	.	-	0	ID=cds-WP_001240418.1;Parent=gene-C9F04_RS26370;Dbxref=Genbank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9F04_RS26370;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11
NZ_PYKF01000839.1	RefSeq	pseudogene	4278	5122	.	+	.	ID=gene-C9F04_RS26375;Name=C9F04_RS26375;end_range=5122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26375;old_locus_tag=C9F04_27295;partial=true;pseudo=true
NZ_PYKF01000839.1	Protein Homology	CDS	4278	5122	.	+	0	ID=cds-C9F04_RS26375;Parent=gene-C9F04_RS26375;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9F04_RS26375;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000354.1 1 5119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000354.1	RefSeq	region	1	5119	.	+	.	ID=NZ_PYKF01000354.1:1..5119;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000354.1	RefSeq	pseudogene	1	662	.	-	.	ID=gene-C9F04_RS10435;Name=C9F04_RS10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10435;old_locus_tag=C9F04_10770;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000354.1	Protein Homology	CDS	1	662	.	-	0	ID=cds-C9F04_RS10435;Parent=gene-C9F04_RS10435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9F04_RS10435;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000354.1	RefSeq	gene	659	1102	.	-	.	ID=gene-C9F04_RS10440;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9F04_RS10440;old_locus_tag=C9F04_10775
NZ_PYKF01000354.1	Protein Homology	CDS	659	1102	.	-	0	ID=cds-WP_146712602.1;Parent=gene-C9F04_RS10440;Dbxref=Genbank:WP_146712602.1;Name=WP_146712602.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9F04_RS10440;product=flagellar export protein FliJ;protein_id=WP_146712602.1;transl_table=11
NZ_PYKF01000354.1	RefSeq	gene	1124	2494	.	-	.	ID=gene-C9F04_RS10445;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F04_RS10445;old_locus_tag=C9F04_10780
NZ_PYKF01000354.1	Protein Homology	CDS	1124	2494	.	-	0	ID=cds-WP_000213257.1;Parent=gene-C9F04_RS10445;Dbxref=Genbank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F04_RS10445;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11
NZ_PYKF01000354.1	RefSeq	gene	2494	3201	.	-	.	ID=gene-C9F04_RS10450;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9F04_RS10450;old_locus_tag=C9F04_10785
NZ_PYKF01000354.1	Protein Homology	CDS	2494	3201	.	-	0	ID=cds-WP_000064158.1;Parent=gene-C9F04_RS10450;Dbxref=Genbank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9F04_RS10450;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11
NZ_PYKF01000354.1	RefSeq	gene	3194	4189	.	-	.	ID=gene-C9F04_RS10455;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9F04_RS10455;old_locus_tag=C9F04_10790
NZ_PYKF01000354.1	Protein Homology	CDS	3194	4189	.	-	0	ID=cds-WP_000067735.1;Parent=gene-C9F04_RS10455;Dbxref=Genbank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9F04_RS10455;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11
NZ_PYKF01000354.1	RefSeq	gene	4182	5119	.	-	.	ID=gene-C9F04_RS10460;Name=fliF;end_range=5119,.;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9F04_RS10460;old_locus_tag=C9F04_10795;partial=true
NZ_PYKF01000354.1	Protein Homology	CDS	4182	5119	.	-	2	ID=cds-WP_146712603.1;Parent=gene-C9F04_RS10460;Dbxref=Genbank:WP_146712603.1;Name=WP_146712603.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;end_range=5119,.;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9F04_RS10460;partial=true;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_146712603.1;transl_table=11
##sequence-region NZ_PYKF01000400.1 1 5104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000400.1	RefSeq	region	1	5104	.	+	.	ID=NZ_PYKF01000400.1:1..5104;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000400.1	RefSeq	gene	1	1191	.	-	.	ID=gene-C9F04_RS11855;Name=C9F04_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11855;old_locus_tag=C9F04_12265;partial=true;start_range=.,1
NZ_PYKF01000400.1	Protein Homology	CDS	1	1191	.	-	0	ID=cds-WP_146712668.1;Parent=gene-C9F04_RS11855;Dbxref=Genbank:WP_146712668.1;Name=WP_146712668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9F04_RS11855;partial=true;product=MFS transporter;protein_id=WP_146712668.1;start_range=.,1;transl_table=11
NZ_PYKF01000400.1	RefSeq	gene	1596	2780	.	+	.	ID=gene-C9F04_RS11860;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9F04_RS11860;old_locus_tag=C9F04_12270
NZ_PYKF01000400.1	Protein Homology	CDS	1596	2780	.	+	0	ID=cds-WP_000815487.1;Parent=gene-C9F04_RS11860;Dbxref=Genbank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9F04_RS11860;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11
NZ_PYKF01000400.1	RefSeq	gene	2891	4363	.	+	.	ID=gene-C9F04_RS11865;Name=C9F04_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11865;old_locus_tag=C9F04_12275
NZ_PYKF01000400.1	Protein Homology	CDS	2891	4363	.	+	0	ID=cds-WP_000437127.1;Parent=gene-C9F04_RS11865;Dbxref=Genbank:WP_000437127.1;Name=WP_000437127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9F04_RS11865;product=fructuronate reductase;protein_id=WP_000437127.1;transl_table=11
NZ_PYKF01000400.1	RefSeq	gene	4375	5104	.	+	.	ID=gene-C9F04_RS11870;Name=C9F04_RS11870;end_range=5104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11870;old_locus_tag=C9F04_12280;partial=true
NZ_PYKF01000400.1	Protein Homology	CDS	4375	5104	.	+	0	ID=cds-WP_146712669.1;Parent=gene-C9F04_RS11870;Dbxref=Genbank:WP_146712669.1;Name=WP_146712669.1;end_range=5104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144578.1;locus_tag=C9F04_RS11870;partial=true;product=glucuronate isomerase;protein_id=WP_146712669.1;transl_table=11
##sequence-region NZ_PYKF01000239.1 1 5089
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000239.1	RefSeq	region	1	5089	.	+	.	ID=NZ_PYKF01000239.1:1..5089;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000239.1	RefSeq	gene	1	569	.	-	.	ID=gene-C9F04_RS06385;Name=C9F04_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06385;old_locus_tag=C9F04_06585;partial=true;start_range=.,1
NZ_PYKF01000239.1	Protein Homology	CDS	1	569	.	-	0	ID=cds-WP_261770751.1;Parent=gene-C9F04_RS06385;Dbxref=Genbank:WP_261770751.1;Name=WP_261770751.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9F04_RS06385;partial=true;product=GTP-binding protein;protein_id=WP_261770751.1;start_range=.,1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	666	1136	.	-	.	ID=gene-C9F04_RS06390;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9F04_RS06390;old_locus_tag=C9F04_06590
NZ_PYKF01000239.1	Protein Homology	CDS	666	1136	.	-	0	ID=cds-WP_001138043.1;Parent=gene-C9F04_RS06390;Dbxref=Genbank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9F04_RS06390;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	1232	1606	.	-	.	ID=gene-C9F04_RS06395;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9F04_RS06395;old_locus_tag=C9F04_06595
NZ_PYKF01000239.1	Protein Homology	CDS	1232	1606	.	-	0	ID=cds-WP_000246815.1;Parent=gene-C9F04_RS06395;Dbxref=Genbank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9F04_RS06395;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	1732	2019	.	-	.	ID=gene-C9F04_RS06400;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9F04_RS06400;old_locus_tag=C9F04_06600
NZ_PYKF01000239.1	Protein Homology	CDS	1732	2019	.	-	0	ID=cds-WP_000903398.1;Parent=gene-C9F04_RS06400;Dbxref=Genbank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9F04_RS06400;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	2027	2383	.	-	.	ID=gene-C9F04_RS06405;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9F04_RS06405;old_locus_tag=C9F04_06605
NZ_PYKF01000239.1	Protein Homology	CDS	2027	2383	.	-	0	ID=cds-WP_023250746.1;Parent=gene-C9F04_RS06405;Dbxref=Genbank:WP_023250746.1;Name=WP_023250746.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9F04_RS06405;product=sulfurtransferase complex subunit TusC;protein_id=WP_023250746.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	2383	2769	.	-	.	ID=gene-C9F04_RS06410;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9F04_RS06410;old_locus_tag=C9F04_06610
NZ_PYKF01000239.1	Protein Homology	CDS	2383	2769	.	-	0	ID=cds-WP_001268011.1;Parent=gene-C9F04_RS06410;Dbxref=Genbank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9F04_RS06410;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	2769	3491	.	-	.	ID=gene-C9F04_RS06415;Name=C9F04_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06415;old_locus_tag=C9F04_06615
NZ_PYKF01000239.1	Protein Homology	CDS	2769	3491	.	-	0	ID=cds-WP_000091471.1;Parent=gene-C9F04_RS06415;Dbxref=Genbank:WP_000091471.1;Name=WP_000091471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9F04_RS06415;product=transcriptional regulator;protein_id=WP_000091471.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	3768	4586	.	-	.	ID=gene-C9F04_RS06420;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9F04_RS06420;old_locus_tag=C9F04_06620
NZ_PYKF01000239.1	Protein Homology	CDS	3768	4586	.	-	0	ID=cds-WP_000838222.1;Parent=gene-C9F04_RS06420;Dbxref=Genbank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9F04_RS06420;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11
NZ_PYKF01000239.1	RefSeq	gene	4806	5024	.	+	.	ID=gene-C9F04_RS06425;Name=C9F04_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06425;old_locus_tag=C9F04_06625
NZ_PYKF01000239.1	Protein Homology	CDS	4806	5024	.	+	0	ID=cds-WP_001152701.1;Parent=gene-C9F04_RS06425;Dbxref=Genbank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9F04_RS06425;product=SlyX family protein;protein_id=WP_001152701.1;transl_table=11
##sequence-region NZ_PYKF01000818.1 1 5069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000818.1	RefSeq	region	1	5069	.	+	.	ID=NZ_PYKF01000818.1:1..5069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000818.1	RefSeq	pseudogene	20	1438	.	+	.	ID=gene-C9F04_RS25760;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=C9F04_RS25760;old_locus_tag=C9F04_26645;partial=true;pseudo=true;start_range=.,20
NZ_PYKF01000818.1	Protein Homology	CDS	20	1438	.	+	0	ID=cds-C9F04_RS25760;Parent=gene-C9F04_RS25760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9F04_RS25760;partial=true;product=alanine--tRNA ligase;pseudo=true;start_range=.,20;transl_table=11
NZ_PYKF01000818.1	RefSeq	gene	1673	1858	.	+	.	ID=gene-C9F04_RS25765;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9F04_RS25765;old_locus_tag=C9F04_26650
NZ_PYKF01000818.1	Protein Homology	CDS	1673	1858	.	+	0	ID=cds-WP_000906486.1;Parent=gene-C9F04_RS25765;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9F04_RS25765;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_PYKF01000818.1	RefSeq	gene	2162	2254	.	+	.	ID=gene-C9F04_RS25770;Name=C9F04_RS25770;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS25770;old_locus_tag=C9F04_26660
NZ_PYKF01000818.1	tRNAscan-SE	tRNA	2162	2254	.	+	.	ID=rna-C9F04_RS25770;Parent=gene-C9F04_RS25770;anticodon=(pos:2196..2198);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25770;product=tRNA-Ser
NZ_PYKF01000818.1	tRNAscan-SE	exon	2162	2254	.	+	.	ID=exon-C9F04_RS25770-1;Parent=rna-C9F04_RS25770;anticodon=(pos:2196..2198);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25770;product=tRNA-Ser
NZ_PYKF01000818.1	RefSeq	gene	2258	2334	.	+	.	ID=gene-C9F04_RS25775;Name=C9F04_RS25775;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS25775;old_locus_tag=C9F04_26665
NZ_PYKF01000818.1	tRNAscan-SE	tRNA	2258	2334	.	+	.	ID=rna-C9F04_RS25775;Parent=gene-C9F04_RS25775;anticodon=(pos:2292..2294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25775;product=tRNA-Arg
NZ_PYKF01000818.1	tRNAscan-SE	exon	2258	2334	.	+	.	ID=exon-C9F04_RS25775-1;Parent=rna-C9F04_RS25775;anticodon=(pos:2292..2294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25775;product=tRNA-Arg
NZ_PYKF01000818.1	RefSeq	gene	2570	3136	.	+	.	ID=gene-C9F04_RS25780;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9F04_RS25780;old_locus_tag=C9F04_26670
NZ_PYKF01000818.1	Protein Homology	CDS	2570	3136	.	+	0	ID=cds-WP_000271296.1;Parent=gene-C9F04_RS25780;Dbxref=Genbank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9F04_RS25780;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11
NZ_PYKF01000818.1	RefSeq	gene	3133	3558	.	+	.	ID=gene-C9F04_RS25785;Name=C9F04_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25785;old_locus_tag=C9F04_26675
NZ_PYKF01000818.1	Protein Homology	CDS	3133	3558	.	+	0	ID=cds-WP_001279499.1;Parent=gene-C9F04_RS25785;Dbxref=Genbank:WP_001279499.1;Name=WP_001279499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9F04_RS25785;product=DedA family protein;protein_id=WP_001279499.1;transl_table=11
NZ_PYKF01000818.1	RefSeq	gene	3635	5069	.	+	.	ID=gene-C9F04_RS25790;Name=gshA;end_range=5069,.;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9F04_RS25790;old_locus_tag=C9F04_26680;partial=true
NZ_PYKF01000818.1	Protein Homology	CDS	3635	5069	.	+	0	ID=cds-WP_146713365.1;Parent=gene-C9F04_RS25790;Dbxref=Genbank:WP_146713365.1;Name=WP_146713365.1;Ontology_term=GO:0006750,GO:0004357;end_range=5069,.;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9F04_RS25790;partial=true;product=glutamate--cysteine ligase;protein_id=WP_146713365.1;transl_table=11
##sequence-region NZ_PYKF01000422.1 1 5032
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000422.1	RefSeq	region	1	5032	.	+	.	ID=NZ_PYKF01000422.1:1..5032;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000422.1	RefSeq	pseudogene	1	1409	.	-	.	ID=gene-C9F04_RS12560;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=pseudogene;locus_tag=C9F04_RS12560;old_locus_tag=C9F04_12980;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000422.1	Protein Homology	CDS	1	1409	.	-	0	ID=cds-C9F04_RS12560;Parent=gene-C9F04_RS12560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9F04_RS12560;partial=true;product=salmochelin/enterobactin export ABC transporter IroC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000422.1	RefSeq	gene	1490	2605	.	-	.	ID=gene-C9F04_RS12565;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9F04_RS12565;old_locus_tag=C9F04_12985
NZ_PYKF01000422.1	Protein Homology	CDS	1490	2605	.	-	0	ID=cds-WP_146712703.1;Parent=gene-C9F04_RS12565;Dbxref=Genbank:WP_146712703.1;Name=WP_146712703.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9F04_RS12565;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_146712703.1;transl_table=11
NZ_PYKF01000422.1	RefSeq	gene	3533	3760	.	+	.	ID=gene-C9F04_RS12580;Name=C9F04_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12580;old_locus_tag=C9F04_13000
NZ_PYKF01000422.1	Protein Homology	CDS	3533	3760	.	+	0	ID=cds-WP_001537512.1;Parent=gene-C9F04_RS12580;Dbxref=Genbank:WP_001537512.1;Name=WP_001537512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=C9F04_RS12580;product=DUF1272 domain-containing protein;protein_id=WP_001537512.1;transl_table=11
NZ_PYKF01000422.1	RefSeq	gene	4074	4901	.	+	.	ID=gene-C9F04_RS12585;Name=C9F04_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12585;old_locus_tag=C9F04_13005
NZ_PYKF01000422.1	Protein Homology	CDS	4074	4901	.	+	0	ID=cds-WP_135369256.1;Parent=gene-C9F04_RS12585;Dbxref=Genbank:WP_135369256.1;Name=WP_135369256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=C9F04_RS12585;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_135369256.1;transl_table=11
NZ_PYKF01000422.1	RefSeq	pseudogene	4909	5032	.	-	.	ID=gene-C9F04_RS27035;Name=C9F04_RS27035;end_range=5032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27035;partial=true;pseudo=true
NZ_PYKF01000422.1	Protein Homology	CDS	4909	5032	.	-	1	ID=cds-C9F04_RS27035;Parent=gene-C9F04_RS27035;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=C9F04_RS27035;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000267.1 1 4990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000267.1	RefSeq	region	1	4990	.	+	.	ID=NZ_PYKF01000267.1:1..4990;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000267.1	RefSeq	gene	1	403	.	-	.	ID=gene-C9F04_RS07435;Name=C9F04_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07435;old_locus_tag=C9F04_07680;partial=true;start_range=.,1
NZ_PYKF01000267.1	Protein Homology	CDS	1	403	.	-	0	ID=cds-WP_186799008.1;Parent=gene-C9F04_RS07435;Dbxref=Genbank:WP_186799008.1;Name=WP_186799008.1;Ontology_term=GO:0016765,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9F04_RS07435;partial=true;product=UbiA family prenyltransferase;protein_id=WP_186799008.1;start_range=.,1;transl_table=11
NZ_PYKF01000267.1	RefSeq	gene	417	914	.	-	.	ID=gene-C9F04_RS07440;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9F04_RS07440;old_locus_tag=C9F04_07685
NZ_PYKF01000267.1	Protein Homology	CDS	417	914	.	-	0	ID=cds-WP_000019230.1;Parent=gene-C9F04_RS07440;Dbxref=Genbank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9F04_RS07440;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11
NZ_PYKF01000267.1	RefSeq	gene	1095	2003	.	-	.	ID=gene-C9F04_RS07445;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9F04_RS07445;old_locus_tag=C9F04_07690
NZ_PYKF01000267.1	Protein Homology	CDS	1095	2003	.	-	0	ID=cds-WP_146712471.1;Parent=gene-C9F04_RS07445;Dbxref=Genbank:WP_146712471.1;Name=WP_146712471.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132669.1;locus_tag=C9F04_RS07445;product=maltose operon protein MalM;protein_id=WP_146712471.1;transl_table=11
NZ_PYKF01000267.1	RefSeq	gene	2176	3534	.	-	.	ID=gene-C9F04_RS07450;Name=C9F04_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07450;old_locus_tag=C9F04_07695
NZ_PYKF01000267.1	Protein Homology	CDS	2176	3534	.	-	0	ID=cds-WP_146712472.1;Parent=gene-C9F04_RS07450;Dbxref=Genbank:WP_146712472.1;Name=WP_146712472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9F04_RS07450;product=maltoporin;protein_id=WP_146712472.1;transl_table=11
NZ_PYKF01000267.1	RefSeq	pseudogene	3623	4732	.	-	.	ID=gene-C9F04_RS07455;Name=malK;gbkey=Gene;gene=malK;gene_biotype=pseudogene;locus_tag=C9F04_RS07455;old_locus_tag=C9F04_07700;pseudo=true
NZ_PYKF01000267.1	Protein Homology	CDS	3623	4732	.	-	0	ID=cds-C9F04_RS07455;Parent=gene-C9F04_RS07455;Note=internal stop;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F04_RS07455;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000561.1 1 4977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000561.1	RefSeq	region	1	4977	.	+	.	ID=NZ_PYKF01000561.1:1..4977;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000561.1	RefSeq	gene	1	500	.	+	.	ID=gene-C9F04_RS16750;Name=C9F04_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16750;old_locus_tag=C9F04_17280;partial=true;start_range=.,1
NZ_PYKF01000561.1	Protein Homology	CDS	1	500	.	+	2	ID=cds-WP_186799047.1;Parent=gene-C9F04_RS16750;Dbxref=Genbank:WP_186799047.1;Name=WP_186799047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9F04_RS16750;partial=true;product=peptidylprolyl isomerase;protein_id=WP_186799047.1;start_range=.,1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	500	1489	.	+	.	ID=gene-C9F04_RS16755;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9F04_RS16755;old_locus_tag=C9F04_17285
NZ_PYKF01000561.1	Protein Homology	CDS	500	1489	.	+	0	ID=cds-WP_146712909.1;Parent=gene-C9F04_RS16755;Dbxref=Genbank:WP_146712909.1;Name=WP_146712909.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9F04_RS16755;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_146712909.1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	1486	2307	.	+	.	ID=gene-C9F04_RS16760;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9F04_RS16760;old_locus_tag=C9F04_17290
NZ_PYKF01000561.1	Protein Homology	CDS	1486	2307	.	+	0	ID=cds-WP_001065397.1;Parent=gene-C9F04_RS16760;Dbxref=Genbank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9F04_RS16760;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	2310	2687	.	+	.	ID=gene-C9F04_RS16765;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9F04_RS16765;old_locus_tag=C9F04_17295
NZ_PYKF01000561.1	Protein Homology	CDS	2310	2687	.	+	0	ID=cds-WP_000610894.1;Parent=gene-C9F04_RS16765;Dbxref=Genbank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9F04_RS16765;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	2698	3546	.	+	.	ID=gene-C9F04_RS16770;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9F04_RS16770;old_locus_tag=C9F04_17300
NZ_PYKF01000561.1	Protein Homology	CDS	2698	3546	.	+	0	ID=cds-WP_146712910.1;Parent=gene-C9F04_RS16770;Dbxref=Genbank:WP_146712910.1;Name=WP_146712910.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9F04_RS16770;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_146712910.1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	3652	4131	.	-	.	ID=gene-C9F04_RS16775;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9F04_RS16775;old_locus_tag=C9F04_17305
NZ_PYKF01000561.1	Protein Homology	CDS	3652	4131	.	-	0	ID=cds-WP_000624379.1;Parent=gene-C9F04_RS16775;Dbxref=Genbank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9F04_RS16775;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11
NZ_PYKF01000561.1	RefSeq	gene	4329	4977	.	-	.	ID=gene-C9F04_RS16780;Name=C9F04_RS16780;end_range=4977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16780;old_locus_tag=C9F04_17315;partial=true
NZ_PYKF01000561.1	Protein Homology	CDS	4329	4977	.	-	1	ID=cds-WP_186799048.1;Parent=gene-C9F04_RS16780;Dbxref=Genbank:WP_186799048.1;Name=WP_186799048.1;Ontology_term=GO:0006813;end_range=4977,.;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F04_RS16780;partial=true;product=NAD-binding protein;protein_id=WP_186799048.1;transl_table=11
##sequence-region NZ_PYKF01000753.1 1 19551
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000753.1	RefSeq	region	1	19551	.	+	.	ID=NZ_PYKF01000753.1:1..19551;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000753.1	RefSeq	pseudogene	30	659	.	-	.	ID=gene-C9F04_RS23365;Name=punR;gbkey=Gene;gene=punR;gene_biotype=pseudogene;locus_tag=C9F04_RS23365;old_locus_tag=C9F04_24145;partial=true;pseudo=true;start_range=.,30
NZ_PYKF01000753.1	Protein Homology	CDS	30	659	.	-	0	ID=cds-C9F04_RS23365;Parent=gene-C9F04_RS23365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F04_RS23365;partial=true;product=DNA-binding transcriptional activator PunR;pseudo=true;start_range=.,30;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	772	1977	.	+	.	ID=gene-C9F04_RS23370;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=C9F04_RS23370;old_locus_tag=C9F04_24150
NZ_PYKF01000753.1	Protein Homology	CDS	772	1977	.	+	0	ID=cds-WP_001182316.1;Parent=gene-C9F04_RS23370;Dbxref=Genbank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016021;gbkey=CDS;gene=punC;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9F04_RS23370;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	2267	3415	.	+	.	ID=gene-C9F04_RS23375;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9F04_RS23375;old_locus_tag=C9F04_24155
NZ_PYKF01000753.1	Protein Homology	CDS	2267	3415	.	+	0	ID=cds-WP_000098878.1;Parent=gene-C9F04_RS23375;Dbxref=Genbank:WP_000098878.1;Name=WP_000098878.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9F04_RS23375;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098878.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	3457	4098	.	-	.	ID=gene-C9F04_RS23380;Name=C9F04_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23380;old_locus_tag=C9F04_24160
NZ_PYKF01000753.1	Protein Homology	CDS	3457	4098	.	-	0	ID=cds-WP_135369641.1;Parent=gene-C9F04_RS23380;Dbxref=Genbank:WP_135369641.1;Name=WP_135369641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9F04_RS23380;product=riboflavin synthase subunit alpha;protein_id=WP_135369641.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	4315	5688	.	+	.	ID=gene-C9F04_RS23385;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9F04_RS23385;old_locus_tag=C9F04_24165
NZ_PYKF01000753.1	Protein Homology	CDS	4315	5688	.	+	0	ID=cds-WP_001175077.1;Parent=gene-C9F04_RS23385;Dbxref=Genbank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9F04_RS23385;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	5840	5916	.	+	.	ID=gene-C9F04_RS23390;Name=C9F04_RS23390;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS23390;old_locus_tag=C9F04_24170
NZ_PYKF01000753.1	tRNAscan-SE	tRNA	5840	5916	.	+	.	ID=rna-C9F04_RS23390;Parent=gene-C9F04_RS23390;anticodon=(pos:5874..5876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23390;product=tRNA-Val
NZ_PYKF01000753.1	tRNAscan-SE	exon	5840	5916	.	+	.	ID=exon-C9F04_RS23390-1;Parent=rna-C9F04_RS23390;anticodon=(pos:5874..5876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23390;product=tRNA-Val
NZ_PYKF01000753.1	RefSeq	gene	5927	6003	.	+	.	ID=gene-C9F04_RS23395;Name=C9F04_RS23395;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS23395;old_locus_tag=C9F04_24175
NZ_PYKF01000753.1	tRNAscan-SE	tRNA	5927	6003	.	+	.	ID=rna-C9F04_RS23395;Parent=gene-C9F04_RS23395;anticodon=(pos:5961..5963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23395;product=tRNA-Val
NZ_PYKF01000753.1	tRNAscan-SE	exon	5927	6003	.	+	.	ID=exon-C9F04_RS23395-1;Parent=rna-C9F04_RS23395;anticodon=(pos:5961..5963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS23395;product=tRNA-Val
NZ_PYKF01000753.1	RefSeq	gene	6160	7218	.	-	.	ID=gene-C9F04_RS23400;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9F04_RS23400;old_locus_tag=C9F04_24180
NZ_PYKF01000753.1	Protein Homology	CDS	6160	7218	.	-	0	ID=cds-WP_001291715.1;Parent=gene-C9F04_RS23400;Dbxref=Genbank:WP_001291715.1;Name=WP_001291715.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9F04_RS23400;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291715.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	7215	7994	.	-	.	ID=gene-C9F04_RS23405;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9F04_RS23405;old_locus_tag=C9F04_24185
NZ_PYKF01000753.1	Protein Homology	CDS	7215	7994	.	-	0	ID=cds-WP_000068762.1;Parent=gene-C9F04_RS23405;Dbxref=Genbank:WP_000068762.1;Name=WP_000068762.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9F04_RS23405;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068762.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	7995	8261	.	-	.	ID=gene-C9F04_RS23410;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9F04_RS23410;old_locus_tag=C9F04_24190
NZ_PYKF01000753.1	Protein Homology	CDS	7995	8261	.	-	0	ID=cds-WP_000999982.1;Parent=gene-C9F04_RS23410;Dbxref=Genbank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9F04_RS23410;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	8258	8905	.	-	.	ID=gene-C9F04_RS23415;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9F04_RS23415;old_locus_tag=C9F04_24195
NZ_PYKF01000753.1	Protein Homology	CDS	8258	8905	.	-	0	ID=cds-WP_000056367.1;Parent=gene-C9F04_RS23415;Dbxref=Genbank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9F04_RS23415;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	8973	9941	.	-	.	ID=gene-C9F04_RS23420;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9F04_RS23420;old_locus_tag=C9F04_24200
NZ_PYKF01000753.1	Protein Homology	CDS	8973	9941	.	-	0	ID=cds-WP_135369640.1;Parent=gene-C9F04_RS23420;Dbxref=Genbank:WP_135369640.1;Name=WP_135369640.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9F04_RS23420;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_135369640.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	9922	10296	.	-	.	ID=gene-C9F04_RS23425;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9F04_RS23425;old_locus_tag=C9F04_24205
NZ_PYKF01000753.1	Protein Homology	CDS	9922	10296	.	-	0	ID=cds-WP_076735671.1;Parent=gene-C9F04_RS23425;Dbxref=Genbank:WP_076735671.1;Name=WP_076735671.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9F04_RS23425;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_076735671.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	10277	10654	.	-	.	ID=gene-C9F04_RS23430;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9F04_RS23430;old_locus_tag=C9F04_24210
NZ_PYKF01000753.1	Protein Homology	CDS	10277	10654	.	-	0	ID=cds-WP_135369639.1;Parent=gene-C9F04_RS23430;Dbxref=Genbank:WP_135369639.1;Name=WP_135369639.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9F04_RS23430;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_135369639.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	10657	11958	.	-	.	ID=gene-C9F04_RS23435;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9F04_RS23435;old_locus_tag=C9F04_24215
NZ_PYKF01000753.1	Protein Homology	CDS	10657	11958	.	-	0	ID=cds-WP_000787210.1;Parent=gene-C9F04_RS23435;Dbxref=Genbank:WP_000787210.1;Name=WP_000787210.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9F04_RS23435;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787210.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	11948	13993	.	-	.	ID=gene-C9F04_RS23440;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9F04_RS23440;old_locus_tag=C9F04_24220
NZ_PYKF01000753.1	Protein Homology	CDS	11948	13993	.	-	0	ID=cds-WP_146713253.1;Parent=gene-C9F04_RS23440;Dbxref=Genbank:WP_146713253.1;Name=WP_146713253.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9F04_RS23440;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_146713253.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	13978	14346	.	-	.	ID=gene-C9F04_RS23445;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9F04_RS23445;old_locus_tag=C9F04_24225
NZ_PYKF01000753.1	Protein Homology	CDS	13978	14346	.	-	0	ID=cds-WP_000383700.1;Parent=gene-C9F04_RS23445;Dbxref=Genbank:WP_000383700.1;Name=WP_000383700.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9F04_RS23445;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383700.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	14404	15420	.	-	.	ID=gene-C9F04_RS23450;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9F04_RS23450;old_locus_tag=C9F04_24230
NZ_PYKF01000753.1	Protein Homology	CDS	14404	15420	.	-	0	ID=cds-WP_146713254.1;Parent=gene-C9F04_RS23450;Dbxref=Genbank:WP_146713254.1;Name=WP_146713254.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9F04_RS23450;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_146713254.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	15386	16060	.	-	.	ID=gene-C9F04_RS23455;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9F04_RS23455;old_locus_tag=C9F04_24235
NZ_PYKF01000753.1	Protein Homology	CDS	15386	16060	.	-	0	ID=cds-WP_135369637.1;Parent=gene-C9F04_RS23455;Dbxref=Genbank:WP_135369637.1;Name=WP_135369637.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9F04_RS23455;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_135369637.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	16057	16605	.	-	.	ID=gene-C9F04_RS23460;Name=C9F04_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23460;old_locus_tag=C9F04_24240
NZ_PYKF01000753.1	Protein Homology	CDS	16057	16605	.	-	0	ID=cds-WP_001531605.1;Parent=gene-C9F04_RS23460;Dbxref=Genbank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9F04_RS23460;product=hypothetical protein;protein_id=WP_001531605.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	16623	17372	.	-	.	ID=gene-C9F04_RS23465;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9F04_RS23465;old_locus_tag=C9F04_24245
NZ_PYKF01000753.1	Protein Homology	CDS	16623	17372	.	-	0	ID=cds-WP_023258851.1;Parent=gene-C9F04_RS23465;Dbxref=Genbank:WP_023258851.1;Name=WP_023258851.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9F04_RS23465;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_023258851.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	17369	17617	.	-	.	ID=gene-C9F04_RS23470;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9F04_RS23470;old_locus_tag=C9F04_24250
NZ_PYKF01000753.1	Protein Homology	CDS	17369	17617	.	-	0	ID=cds-WP_001562742.1;Parent=gene-C9F04_RS23470;Dbxref=Genbank:WP_001562742.1;Name=WP_001562742.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=C9F04_RS23470;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001562742.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	17629	17919	.	-	.	ID=gene-C9F04_RS23475;Name=C9F04_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23475;old_locus_tag=C9F04_24255
NZ_PYKF01000753.1	Protein Homology	CDS	17629	17919	.	-	0	ID=cds-WP_000444713.1;Parent=gene-C9F04_RS23475;Dbxref=Genbank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9F04_RS23475;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	17897	18112	.	-	.	ID=gene-C9F04_RS23480;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9F04_RS23480;old_locus_tag=C9F04_24260
NZ_PYKF01000753.1	Protein Homology	CDS	17897	18112	.	-	0	ID=cds-WP_000350226.1;Parent=gene-C9F04_RS23480;Dbxref=Genbank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9F04_RS23480;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	18206	18895	.	-	.	ID=gene-C9F04_RS23485;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9F04_RS23485;old_locus_tag=C9F04_24265
NZ_PYKF01000753.1	Protein Homology	CDS	18206	18895	.	-	0	ID=cds-WP_135369636.1;Parent=gene-C9F04_RS23485;Dbxref=Genbank:WP_135369636.1;Name=WP_135369636.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9F04_RS23485;product=pathogenicity island 2 effector protein SseG;protein_id=WP_135369636.1;transl_table=11
NZ_PYKF01000753.1	RefSeq	gene	18892	19551	.	-	.	ID=gene-C9F04_RS23490;Name=sseF;end_range=19551,.;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9F04_RS23490;old_locus_tag=C9F04_24270;partial=true
NZ_PYKF01000753.1	Protein Homology	CDS	18892	19551	.	-	0	ID=cds-WP_222591894.1;Parent=gene-C9F04_RS23490;Dbxref=Genbank:WP_222591894.1;Name=WP_222591894.1;end_range=19551,.;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9F04_RS23490;partial=true;product=type III secretion systems effector SseF;protein_id=WP_222591894.1;transl_table=11
##sequence-region NZ_PYKF01000652.1 1 4976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000652.1	RefSeq	region	1	4976	.	+	.	ID=NZ_PYKF01000652.1:1..4976;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000652.1	RefSeq	pseudogene	86	1213	.	+	.	ID=gene-C9F04_RS19975;Name=C9F04_RS19975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19975;old_locus_tag=C9F04_20630;partial=true;pseudo=true;start_range=.,86
NZ_PYKF01000652.1	Protein Homology	CDS	86	1213	.	+	0	ID=cds-C9F04_RS19975;Parent=gene-C9F04_RS19975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9F04_RS19975;partial=true;product=mannitol dehydrogenase family protein;pseudo=true;start_range=.,86;transl_table=11
NZ_PYKF01000652.1	RefSeq	gene	1216	2232	.	+	.	ID=gene-C9F04_RS19980;Name=C9F04_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19980;old_locus_tag=C9F04_20635
NZ_PYKF01000652.1	Protein Homology	CDS	1216	2232	.	+	0	ID=cds-WP_000853913.1;Parent=gene-C9F04_RS19980;Dbxref=Genbank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9F04_RS19980;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11
NZ_PYKF01000652.1	RefSeq	gene	2246	3253	.	+	.	ID=gene-C9F04_RS19985;Name=C9F04_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19985;old_locus_tag=C9F04_20640
NZ_PYKF01000652.1	Protein Homology	CDS	2246	3253	.	+	0	ID=cds-WP_000104231.1;Parent=gene-C9F04_RS19985;Dbxref=Genbank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9F04_RS19985;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11
NZ_PYKF01000652.1	RefSeq	gene	3292	3765	.	+	.	ID=gene-C9F04_RS19990;Name=C9F04_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19990;old_locus_tag=C9F04_20645
NZ_PYKF01000652.1	Protein Homology	CDS	3292	3765	.	+	0	ID=cds-WP_000965536.1;Parent=gene-C9F04_RS19990;Dbxref=Genbank:WP_000965536.1;Name=WP_000965536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9F04_RS19990;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000965536.1;transl_table=11
NZ_PYKF01000652.1	RefSeq	gene	3979	4935	.	+	.	ID=gene-C9F04_RS19995;Name=C9F04_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19995;old_locus_tag=C9F04_20650
NZ_PYKF01000652.1	Protein Homology	CDS	3979	4935	.	+	0	ID=cds-WP_135420025.1;Parent=gene-C9F04_RS19995;Dbxref=Genbank:WP_135420025.1;Name=WP_135420025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9F04_RS19995;product=alpha/beta hydrolase;protein_id=WP_135420025.1;transl_table=11
##sequence-region NZ_PYKF01000388.1 1 4960
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000388.1	RefSeq	region	1	4960	.	+	.	ID=NZ_PYKF01000388.1:1..4960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000388.1	RefSeq	pseudogene	1	450	.	+	.	ID=gene-C9F04_RS11450;Name=C9F04_RS11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11450;old_locus_tag=C9F04_11835;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000388.1	Protein Homology	CDS	1	450	.	+	0	ID=cds-C9F04_RS11450;Parent=gene-C9F04_RS11450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9F04_RS11450;partial=true;product=guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000388.1	RefSeq	gene	455	1144	.	+	.	ID=gene-C9F04_RS11455;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9F04_RS11455;old_locus_tag=C9F04_11840
NZ_PYKF01000388.1	Protein Homology	CDS	455	1144	.	+	0	ID=cds-WP_135369668.1;Parent=gene-C9F04_RS11455;Dbxref=Genbank:WP_135369668.1;Name=WP_135369668.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9F04_RS11455;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_135369668.1;transl_table=11
NZ_PYKF01000388.1	RefSeq	gene	1150	3231	.	+	.	ID=gene-C9F04_RS11460;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9F04_RS11460;old_locus_tag=C9F04_11845
NZ_PYKF01000388.1	Protein Homology	CDS	1150	3231	.	+	0	ID=cds-WP_146712652.1;Parent=gene-C9F04_RS11460;Dbxref=Genbank:WP_146712652.1;Name=WP_146712652.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9F04_RS11460;product=ATP-dependent DNA helicase RecG;protein_id=WP_146712652.1;transl_table=11
NZ_PYKF01000388.1	RefSeq	gene	3267	4472	.	-	.	ID=gene-C9F04_RS11465;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9F04_RS11465;old_locus_tag=C9F04_11850
NZ_PYKF01000388.1	Protein Homology	CDS	3267	4472	.	-	0	ID=cds-WP_000462250.1;Parent=gene-C9F04_RS11465;Dbxref=Genbank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9F04_RS11465;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11
NZ_PYKF01000388.1	RefSeq	pseudogene	4700	4960	.	+	.	ID=gene-C9F04_RS11470;Name=C9F04_RS11470;end_range=4960,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11470;old_locus_tag=C9F04_11855;partial=true;pseudo=true
NZ_PYKF01000388.1	Protein Homology	CDS	4700	4960	.	+	0	ID=cds-C9F04_RS11470;Parent=gene-C9F04_RS11470;Note=high-affinity transporter for xanthine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4960,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9F04_RS11470;partial=true;product=xanthine permease XanP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000013.1 1 4951
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000013.1	RefSeq	region	1	4951	.	+	.	ID=NZ_PYKF01000013.1:1..4951;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000013.1	RefSeq	gene	251	366	.	+	.	ID=gene-C9F04_RS00125;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F04_RS00125;old_locus_tag=C9F04_00140
NZ_PYKF01000013.1	cmsearch	rRNA	251	366	.	+	.	ID=rna-C9F04_RS00125;Parent=gene-C9F04_RS00125;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00125;product=5S ribosomal RNA
NZ_PYKF01000013.1	cmsearch	exon	251	366	.	+	.	ID=exon-C9F04_RS00125-1;Parent=rna-C9F04_RS00125;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00125;product=5S ribosomal RNA
NZ_PYKF01000013.1	RefSeq	gene	575	1030	.	+	.	ID=gene-C9F04_RS00130;Name=C9F04_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00130;old_locus_tag=C9F04_00145
NZ_PYKF01000013.1	Protein Homology	CDS	575	1030	.	+	0	ID=cds-WP_000985653.1;Parent=gene-C9F04_RS00130;Dbxref=Genbank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9F04_RS00130;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11
NZ_PYKF01000013.1	RefSeq	gene	1134	2435	.	+	.	ID=gene-C9F04_RS00135;Name=C9F04_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00135;old_locus_tag=C9F04_00150
NZ_PYKF01000013.1	Protein Homology	CDS	1134	2435	.	+	0	ID=cds-WP_146712128.1;Parent=gene-C9F04_RS00135;Dbxref=Genbank:WP_146712128.1;Name=WP_146712128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9F04_RS00135;product=MFS transporter;protein_id=WP_146712128.1;transl_table=11
NZ_PYKF01000013.1	RefSeq	gene	2432	2755	.	-	.	ID=gene-C9F04_RS00140;Name=C9F04_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00140;old_locus_tag=C9F04_00155
NZ_PYKF01000013.1	Protein Homology	CDS	2432	2755	.	-	0	ID=cds-WP_001264467.1;Parent=gene-C9F04_RS00140;Dbxref=Genbank:WP_001264467.1;Name=WP_001264467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9F04_RS00140;product=YfiM family lipoprotein;protein_id=WP_001264467.1;transl_table=11
NZ_PYKF01000013.1	RefSeq	gene	2798	4153	.	-	.	ID=gene-C9F04_RS00145;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9F04_RS00145;old_locus_tag=C9F04_00160
NZ_PYKF01000013.1	Protein Homology	CDS	2798	4153	.	-	0	ID=cds-WP_000949286.1;Parent=gene-C9F04_RS00145;Dbxref=Genbank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9F04_RS00145;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11
NZ_PYKF01000013.1	RefSeq	gene	4137	4178	.	-	.	ID=gene-C9F04_RS26730;Name=C9F04_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26730
NZ_PYKF01000013.1	Protein Homology	CDS	4137	4178	.	-	0	ID=cds-WP_211180504.1;Parent=gene-C9F04_RS26730;Dbxref=Genbank:WP_211180504.1;Name=WP_211180504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=C9F04_RS26730;product=protein PssL;protein_id=WP_211180504.1;transl_table=11
NZ_PYKF01000013.1	RefSeq	gene	4268	4951	.	-	.	ID=gene-C9F04_RS00150;Name=C9F04_RS00150;end_range=4951,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00150;old_locus_tag=C9F04_00165;partial=true
NZ_PYKF01000013.1	Protein Homology	CDS	4268	4951	.	-	0	ID=cds-WP_146712129.1;Parent=gene-C9F04_RS00150;Dbxref=Genbank:WP_146712129.1;Name=WP_146712129.1;end_range=4951,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F04_RS00150;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_146712129.1;transl_table=11
##sequence-region NZ_PYKF01000235.1 1 4937
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000235.1	RefSeq	region	1	4937	.	+	.	ID=NZ_PYKF01000235.1:1..4937;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000235.1	RefSeq	pseudogene	117	1244	.	+	.	ID=gene-C9F04_RS06230;Name=C9F04_RS06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06230;old_locus_tag=C9F04_06430;partial=true;pseudo=true;start_range=.,117
NZ_PYKF01000235.1	Protein Homology	CDS	117	1244	.	+	0	ID=cds-C9F04_RS06230;Parent=gene-C9F04_RS06230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009060,GO:0004129,GO:0020037,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9F04_RS06230;partial=true;product=cbb3-type cytochrome c oxidase subunit I;pseudo=true;start_range=.,117;transl_table=11
NZ_PYKF01000235.1	RefSeq	gene	1234	1848	.	+	.	ID=gene-C9F04_RS06235;Name=C9F04_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06235;old_locus_tag=C9F04_06435
NZ_PYKF01000235.1	Protein Homology	CDS	1234	1848	.	+	0	ID=cds-WP_000179833.1;Parent=gene-C9F04_RS06235;Dbxref=Genbank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9F04_RS06235;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11
NZ_PYKF01000235.1	RefSeq	gene	1848	2177	.	+	.	ID=gene-C9F04_RS06240;Name=C9F04_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06240;old_locus_tag=C9F04_06440
NZ_PYKF01000235.1	Protein Homology	CDS	1848	2177	.	+	0	ID=cds-WP_000019878.1;Parent=gene-C9F04_RS06240;Dbxref=Genbank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9F04_RS06240;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11
NZ_PYKF01000235.1	RefSeq	gene	2189	3079	.	+	.	ID=gene-C9F04_RS06245;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9F04_RS06245;old_locus_tag=C9F04_06445
NZ_PYKF01000235.1	Protein Homology	CDS	2189	3079	.	+	0	ID=cds-WP_000971352.1;Parent=gene-C9F04_RS06245;Dbxref=Genbank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016021;gbkey=CDS;gene=cyoE;go_component=integral component of membrane|0016021||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9F04_RS06245;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11
NZ_PYKF01000235.1	RefSeq	gene	3161	4654	.	-	.	ID=gene-C9F04_RS06250;Name=C9F04_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06250;old_locus_tag=C9F04_06450
NZ_PYKF01000235.1	Protein Homology	CDS	3161	4654	.	-	0	ID=cds-WP_000595930.1;Parent=gene-C9F04_RS06250;Dbxref=Genbank:WP_000595930.1;Name=WP_000595930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=C9F04_RS06250;product=sel1 repeat family protein;protein_id=WP_000595930.1;transl_table=11
NZ_PYKF01000235.1	RefSeq	pseudogene	4666	4937	.	-	.	ID=gene-C9F04_RS06255;Name=C9F04_RS06255;end_range=4937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06255;old_locus_tag=C9F04_06455;partial=true;pseudo=true
NZ_PYKF01000235.1	Protein Homology	CDS	4666	4937	.	-	2	ID=cds-C9F04_RS06255;Parent=gene-C9F04_RS06255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F04_RS06255;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000266.1 1 4934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000266.1	RefSeq	region	1	4934	.	+	.	ID=NZ_PYKF01000266.1:1..4934;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000266.1	RefSeq	pseudogene	1	101	.	-	.	ID=gene-C9F04_RS07405;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=pseudogene;locus_tag=C9F04_RS07405;old_locus_tag=C9F04_07645;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000266.1	Protein Homology	CDS	1	101	.	-	0	ID=cds-C9F04_RS07405;Parent=gene-C9F04_RS07405;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F04_RS07405;partial=true;product=preprotein translocase subunit YajC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000266.1	RefSeq	gene	124	1251	.	-	.	ID=gene-C9F04_RS07410;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9F04_RS07410;old_locus_tag=C9F04_07650
NZ_PYKF01000266.1	Protein Homology	CDS	124	1251	.	-	0	ID=cds-WP_146712470.1;Parent=gene-C9F04_RS07410;Dbxref=Genbank:WP_146712470.1;Name=WP_146712470.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9F04_RS07410;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_146712470.1;transl_table=11
NZ_PYKF01000266.1	RefSeq	gene	1448	2512	.	-	.	ID=gene-C9F04_RS07415;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9F04_RS07415;old_locus_tag=C9F04_07660
NZ_PYKF01000266.1	Protein Homology	CDS	1448	2512	.	-	0	ID=cds-WP_001266530.1;Parent=gene-C9F04_RS07415;Dbxref=Genbank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9F04_RS07415;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11
NZ_PYKF01000266.1	RefSeq	gene	2606	3187	.	+	.	ID=gene-C9F04_RS07420;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9F04_RS07420;old_locus_tag=C9F04_07665
NZ_PYKF01000266.1	Protein Homology	CDS	2606	3187	.	+	0	ID=cds-WP_001009858.1;Parent=gene-C9F04_RS07420;Dbxref=Genbank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9F04_RS07420;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11
NZ_PYKF01000266.1	RefSeq	gene	3397	3999	.	+	.	ID=gene-C9F04_RS07425;Name=C9F04_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07425;old_locus_tag=C9F04_07670
NZ_PYKF01000266.1	Protein Homology	CDS	3397	3999	.	+	0	ID=cds-WP_000244731.1;Parent=gene-C9F04_RS07425;Dbxref=Genbank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9F04_RS07425;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11
NZ_PYKF01000266.1	RefSeq	pseudogene	4071	4844	.	-	.	ID=gene-C9F04_RS07430;Name=C9F04_RS07430;end_range=4844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07430;old_locus_tag=C9F04_07675;partial=true;pseudo=true
NZ_PYKF01000266.1	Protein Homology	CDS	4071	4844	.	-	0	ID=cds-C9F04_RS07430;Parent=gene-C9F04_RS07430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0003824;end_range=4844,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9F04_RS07430;partial=true;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000801.1 1 4926
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000801.1	RefSeq	region	1	4926	.	+	.	ID=NZ_PYKF01000801.1:1..4926;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000801.1	RefSeq	pseudogene	40	201	.	-	.	ID=gene-C9F04_RS24990;Name=C9F04_RS24990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24990;old_locus_tag=C9F04_25850;partial=true;pseudo=true;start_range=.,40
NZ_PYKF01000801.1	Protein Homology	CDS	40	201	.	-	0	ID=cds-C9F04_RS24990;Parent=gene-C9F04_RS24990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9F04_RS24990;partial=true;product=electron transfer flavoprotein;pseudo=true;start_range=.,40;transl_table=11
NZ_PYKF01000801.1	RefSeq	gene	664	1554	.	+	.	ID=gene-C9F04_RS24995;Name=C9F04_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24995;old_locus_tag=C9F04_25855
NZ_PYKF01000801.1	Protein Homology	CDS	664	1554	.	+	0	ID=cds-WP_000284832.1;Parent=gene-C9F04_RS24995;Dbxref=Genbank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9F04_RS24995;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11
NZ_PYKF01000801.1	RefSeq	gene	1630	2781	.	-	.	ID=gene-C9F04_RS25000;Name=C9F04_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25000;old_locus_tag=C9F04_25860
NZ_PYKF01000801.1	Protein Homology	CDS	1630	2781	.	-	0	ID=cds-WP_000347819.1;Parent=gene-C9F04_RS25000;Dbxref=Genbank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9F04_RS25000;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11
NZ_PYKF01000801.1	RefSeq	gene	2795	4390	.	-	.	ID=gene-C9F04_RS25005;Name=C9F04_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25005;old_locus_tag=C9F04_25865
NZ_PYKF01000801.1	Protein Homology	CDS	2795	4390	.	-	0	ID=cds-WP_000700599.1;Parent=gene-C9F04_RS25005;Dbxref=Genbank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9F04_RS25005;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11
NZ_PYKF01000801.1	RefSeq	gene	4544	4926	.	-	.	ID=gene-C9F04_RS25010;Name=aroD;end_range=4926,.;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9F04_RS25010;old_locus_tag=C9F04_25870;partial=true
NZ_PYKF01000801.1	Protein Homology	CDS	4544	4926	.	-	2	ID=cds-WP_146713331.1;Parent=gene-C9F04_RS25010;Dbxref=Genbank:WP_146713331.1;Name=WP_146713331.1;Ontology_term=GO:0009423,GO:0003855;end_range=4926,.;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002951269.1;locus_tag=C9F04_RS25010;partial=true;product=type I 3-dehydroquinate dehydratase;protein_id=WP_146713331.1;transl_table=11
##sequence-region NZ_PYKF01000138.1 1 4892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000138.1	RefSeq	region	1	4892	.	+	.	ID=NZ_PYKF01000138.1:1..4892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000138.1	RefSeq	pseudogene	1	637	.	-	.	ID=gene-C9F04_RS02830;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=pseudogene;locus_tag=C9F04_RS02830;old_locus_tag=C9F04_02935;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000138.1	Protein Homology	CDS	1	637	.	-	0	ID=cds-C9F04_RS02830;Parent=gene-C9F04_RS02830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F04_RS02830;partial=true;product=virulence-associated effector SrfA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	861	1094	.	+	.	ID=gene-C9F04_RS02835;Name=C9F04_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02835;old_locus_tag=C9F04_02940
NZ_PYKF01000138.1	Protein Homology	CDS	861	1094	.	+	0	ID=cds-WP_000018720.1;Parent=gene-C9F04_RS02835;Dbxref=Genbank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9F04_RS02835;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	1099	1548	.	-	.	ID=gene-C9F04_RS02840;Name=C9F04_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02840;old_locus_tag=C9F04_02945
NZ_PYKF01000138.1	Protein Homology	CDS	1099	1548	.	-	0	ID=cds-WP_001076571.1;Parent=gene-C9F04_RS02840;Dbxref=Genbank:WP_001076571.1;Name=WP_001076571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9F04_RS02840;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	1548	2063	.	-	.	ID=gene-C9F04_RS02845;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9F04_RS02845;old_locus_tag=C9F04_02950
NZ_PYKF01000138.1	Protein Homology	CDS	1548	2063	.	-	0	ID=cds-WP_079951826.1;Parent=gene-C9F04_RS02845;Dbxref=Genbank:WP_079951826.1;Name=WP_079951826.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9F04_RS02845;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_079951826.1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	2287	3324	.	+	.	ID=gene-C9F04_RS02850;Name=C9F04_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02850;old_locus_tag=C9F04_02955
NZ_PYKF01000138.1	Protein Homology	CDS	2287	3324	.	+	0	ID=cds-WP_146712264.1;Parent=gene-C9F04_RS02850;Dbxref=Genbank:WP_146712264.1;Name=WP_146712264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9F04_RS02850;product=NADP-dependent oxidoreductase;protein_id=WP_146712264.1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	3658	4323	.	+	.	ID=gene-C9F04_RS02855;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9F04_RS02855;old_locus_tag=C9F04_02960
NZ_PYKF01000138.1	Protein Homology	CDS	3658	4323	.	+	0	ID=cds-WP_001119592.1;Parent=gene-C9F04_RS02855;Dbxref=Genbank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9F04_RS02855;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11
NZ_PYKF01000138.1	RefSeq	gene	4379	4892	.	-	.	ID=gene-C9F04_RS02860;Name=C9F04_RS02860;end_range=4892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02860;old_locus_tag=C9F04_02965;partial=true
NZ_PYKF01000138.1	Protein Homology	CDS	4379	4892	.	-	1	ID=cds-WP_146712265.1;Parent=gene-C9F04_RS02860;Dbxref=Genbank:WP_146712265.1;Name=WP_146712265.1;end_range=4892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9F04_RS02860;partial=true;product=TonB-dependent receptor;protein_id=WP_146712265.1;transl_table=11
##sequence-region NZ_PYKF01000056.1 1 4846
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000056.1	RefSeq	region	1	4846	.	+	.	ID=NZ_PYKF01000056.1:1..4846;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000056.1	RefSeq	pseudogene	8	640	.	-	.	ID=gene-C9F04_RS01030;Name=C9F04_RS01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01030;old_locus_tag=C9F04_01095;partial=true;pseudo=true;start_range=.,8
NZ_PYKF01000056.1	Protein Homology	CDS	8	640	.	-	0	ID=cds-C9F04_RS01030;Parent=gene-C9F04_RS01030;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311444.1;locus_tag=C9F04_RS01030;partial=true;product=serine hydroxymethyltransferase;pseudo=true;start_range=.,8;transl_table=11
NZ_PYKF01000056.1	RefSeq	gene	965	2155	.	+	.	ID=gene-C9F04_RS01035;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9F04_RS01035;old_locus_tag=C9F04_01100
NZ_PYKF01000056.1	Protein Homology	CDS	965	2155	.	+	0	ID=cds-WP_146712174.1;Parent=gene-C9F04_RS01035;Dbxref=Genbank:WP_146712174.1;Name=WP_146712174.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9F04_RS01035;product=NO-inducible flavohemoprotein;protein_id=WP_146712174.1;transl_table=11
NZ_PYKF01000056.1	RefSeq	gene	2337	3881	.	+	.	ID=gene-C9F04_RS01040;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9F04_RS01040;old_locus_tag=C9F04_01105
NZ_PYKF01000056.1	Protein Homology	CDS	2337	3881	.	+	0	ID=cds-WP_001187151.1;Parent=gene-C9F04_RS01040;Dbxref=Genbank:WP_001187151.1;Name=WP_001187151.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9F04_RS01040;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187151.1;transl_table=11
NZ_PYKF01000056.1	RefSeq	pseudogene	4242	4811	.	+	.	ID=gene-C9F04_RS01045;Name=C9F04_RS01045;end_range=4811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01045;old_locus_tag=C9F04_01110;partial=true;pseudo=true
NZ_PYKF01000056.1	Protein Homology	CDS	4242	4811	.	+	0	ID=cds-C9F04_RS01045;Parent=gene-C9F04_RS01045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=4811,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9F04_RS01045;partial=true;product=amino acid permease;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000833.1 1 4830
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000833.1	RefSeq	region	1	4830	.	+	.	ID=NZ_PYKF01000833.1:1..4830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000833.1	RefSeq	gene	1	494	.	-	.	ID=gene-C9F04_RS26125;Name=C9F04_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26125;old_locus_tag=C9F04_27040;partial=true;start_range=.,1
NZ_PYKF01000833.1	Protein Homology	CDS	1	494	.	-	0	ID=cds-WP_146713380.1;Parent=gene-C9F04_RS26125;Dbxref=Genbank:WP_146713380.1;Name=WP_146713380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9F04_RS26125;partial=true;product=DJ-1/PfpI family protein;protein_id=WP_146713380.1;start_range=.,1;transl_table=11
NZ_PYKF01000833.1	RefSeq	gene	1045	1548	.	+	.	ID=gene-C9F04_RS26130;Name=C9F04_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26130;old_locus_tag=C9F04_27045
NZ_PYKF01000833.1	Protein Homology	CDS	1045	1548	.	+	0	ID=cds-WP_000741707.1;Parent=gene-C9F04_RS26130;Dbxref=Genbank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9F04_RS26130;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11
NZ_PYKF01000833.1	RefSeq	gene	1727	2365	.	-	.	ID=gene-C9F04_RS26135;Name=C9F04_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26135;old_locus_tag=C9F04_27050
NZ_PYKF01000833.1	Protein Homology	CDS	1727	2365	.	-	0	ID=cds-WP_000684804.1;Parent=gene-C9F04_RS26135;Dbxref=Genbank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F04_RS26135;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11
NZ_PYKF01000833.1	RefSeq	gene	2621	2956	.	+	.	ID=gene-C9F04_RS26140;Name=C9F04_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26140;old_locus_tag=C9F04_27055
NZ_PYKF01000833.1	Protein Homology	CDS	2621	2956	.	+	0	ID=cds-WP_023258287.1;Parent=gene-C9F04_RS26140;Dbxref=Genbank:WP_023258287.1;Name=WP_023258287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9F04_RS26140;product=YecR-like lipofamily protein;protein_id=WP_023258287.1;transl_table=11
NZ_PYKF01000833.1	RefSeq	gene	3196	3693	.	+	.	ID=gene-C9F04_RS26145;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9F04_RS26145;old_locus_tag=C9F04_27060
NZ_PYKF01000833.1	Protein Homology	CDS	3196	3693	.	+	0	ID=cds-WP_000920611.1;Parent=gene-C9F04_RS26145;Dbxref=Genbank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9F04_RS26145;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11
NZ_PYKF01000833.1	RefSeq	gene	3739	3978	.	-	.	ID=gene-C9F04_RS26150;Name=C9F04_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26150;old_locus_tag=C9F04_27065
NZ_PYKF01000833.1	Protein Homology	CDS	3739	3978	.	-	0	ID=cds-WP_000377238.1;Parent=gene-C9F04_RS26150;Dbxref=Genbank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9F04_RS26150;product=YecH family protein;protein_id=WP_000377238.1;transl_table=11
NZ_PYKF01000833.1	RefSeq	pseudogene	4205	4830	.	+	.	ID=gene-C9F04_RS26155;Name=C9F04_RS26155;end_range=4830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26155;old_locus_tag=C9F04_27070;partial=true;pseudo=true
NZ_PYKF01000833.1	Protein Homology	CDS	4205	4830	.	+	0	ID=cds-C9F04_RS26155;Parent=gene-C9F04_RS26155;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9F04_RS26155;partial=true;product=amino acid permease;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000206.1 1 4818
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000206.1	RefSeq	region	1	4818	.	+	.	ID=NZ_PYKF01000206.1:1..4818;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000206.1	RefSeq	pseudogene	1	166	.	+	.	ID=gene-C9F04_RS05000;Name=C9F04_RS05000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05000;old_locus_tag=C9F04_05165;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000206.1	Protein Homology	CDS	1	166	.	+	1	ID=cds-C9F04_RS05000;Parent=gene-C9F04_RS05000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F04_RS05000;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000206.1	RefSeq	gene	177	1136	.	+	.	ID=gene-C9F04_RS05005;Name=C9F04_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05005;old_locus_tag=C9F04_05170
NZ_PYKF01000206.1	Protein Homology	CDS	177	1136	.	+	0	ID=cds-WP_135369579.1;Parent=gene-C9F04_RS05005;Dbxref=Genbank:WP_135369579.1;Name=WP_135369579.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9F04_RS05005;product=aminoimidazole riboside kinase;protein_id=WP_135369579.1;transl_table=11
NZ_PYKF01000206.1	RefSeq	gene	1146	2186	.	+	.	ID=gene-C9F04_RS05010;Name=C9F04_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05010;old_locus_tag=C9F04_05175
NZ_PYKF01000206.1	Protein Homology	CDS	1146	2186	.	+	0	ID=cds-WP_000557881.1;Parent=gene-C9F04_RS05010;Dbxref=Genbank:WP_000557881.1;Name=WP_000557881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9F04_RS05010;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557881.1;transl_table=11
NZ_PYKF01000206.1	RefSeq	gene	2249	2971	.	+	.	ID=gene-C9F04_RS05015;Name=C9F04_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05015;old_locus_tag=C9F04_05180
NZ_PYKF01000206.1	Protein Homology	CDS	2249	2971	.	+	0	ID=cds-WP_001535809.1;Parent=gene-C9F04_RS05015;Dbxref=Genbank:WP_001535809.1;Name=WP_001535809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9F04_RS05015;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11
NZ_PYKF01000206.1	RefSeq	pseudogene	3069	3194	.	+	.	ID=gene-C9F04_RS05020;Name=C9F04_RS05020;end_range=3194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05020;old_locus_tag=C9F04_05185;partial=true;pseudo=true
NZ_PYKF01000206.1	Protein Homology	CDS	3069	3194	.	+	0	ID=cds-C9F04_RS05020;Parent=gene-C9F04_RS05020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=C9F04_RS05020;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000206.1	RefSeq	pseudogene	3246	3386	.	+	.	ID=gene-C9F04_RS05025;Name=C9F04_RS05025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05025;old_locus_tag=C9F04_05190;partial=true;pseudo=true;start_range=.,3246
NZ_PYKF01000206.1	Protein Homology	CDS	3246	3386	.	+	0	ID=cds-C9F04_RS05025;Parent=gene-C9F04_RS05025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9F04_RS05025;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;start_range=.,3246;transl_table=11
NZ_PYKF01000206.1	RefSeq	gene	3476	3826	.	-	.	ID=gene-C9F04_RS05030;Name=C9F04_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05030;old_locus_tag=C9F04_05195
NZ_PYKF01000206.1	Protein Homology	CDS	3476	3826	.	-	0	ID=cds-WP_001173083.1;Parent=gene-C9F04_RS05030;Dbxref=Genbank:WP_001173083.1;Name=WP_001173083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9F04_RS05030;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11
NZ_PYKF01000206.1	RefSeq	gene	3840	4818	.	-	.	ID=gene-C9F04_RS05035;Name=lsrK;end_range=4818,.;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9F04_RS05035;old_locus_tag=C9F04_05200;partial=true
NZ_PYKF01000206.1	Protein Homology	CDS	3840	4818	.	-	1	ID=cds-WP_146712366.1;Parent=gene-C9F04_RS05035;Dbxref=Genbank:WP_146712366.1;Name=WP_146712366.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;end_range=4818,.;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9F04_RS05035;partial=true;product=autoinducer-2 kinase;protein_id=WP_146712366.1;transl_table=11
##sequence-region NZ_PYKF01000717.1 1 19474
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000717.1	RefSeq	region	1	19474	.	+	.	ID=NZ_PYKF01000717.1:1..19474;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000717.1	RefSeq	gene	1	611	.	-	.	ID=gene-C9F04_RS22235;Name=C9F04_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22235;old_locus_tag=C9F04_22970;partial=true;start_range=.,1
NZ_PYKF01000717.1	Protein Homology	CDS	1	611	.	-	0	ID=cds-WP_186799077.1;Parent=gene-C9F04_RS22235;Dbxref=Genbank:WP_186799077.1;Name=WP_186799077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9F04_RS22235;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_186799077.1;start_range=.,1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	655	2028	.	-	.	ID=gene-C9F04_RS22240;Name=C9F04_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22240;old_locus_tag=C9F04_22975
NZ_PYKF01000717.1	Protein Homology	CDS	655	2028	.	-	0	ID=cds-WP_146713188.1;Parent=gene-C9F04_RS22240;Dbxref=Genbank:WP_146713188.1;Name=WP_146713188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9F04_RS22240;product=PTS galactitol transporter subunit IIC;protein_id=WP_146713188.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	2032	2316	.	-	.	ID=gene-C9F04_RS22245;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9F04_RS22245;old_locus_tag=C9F04_22980
NZ_PYKF01000717.1	Protein Homology	CDS	2032	2316	.	-	0	ID=cds-WP_000824292.1;Parent=gene-C9F04_RS22245;Dbxref=Genbank:WP_000824292.1;Name=WP_000824292.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9F04_RS22245;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824292.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	2347	2811	.	-	.	ID=gene-C9F04_RS22250;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9F04_RS22250;old_locus_tag=C9F04_22985
NZ_PYKF01000717.1	Protein Homology	CDS	2347	2811	.	-	0	ID=cds-WP_000080445.1;Parent=gene-C9F04_RS22250;Dbxref=Genbank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9F04_RS22250;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	pseudogene	2826	4097	.	-	.	ID=gene-C9F04_RS22255;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=pseudogene;locus_tag=C9F04_RS22255;old_locus_tag=C9F04_22990;pseudo=true
NZ_PYKF01000717.1	Protein Homology	CDS	2826	4097	.	-	0	ID=cds-C9F04_RS22255;Parent=gene-C9F04_RS22255;Note=internal stop;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9F04_RS22255;product=tagatose-bisphosphate aldolase subunit GatZ;pseudo=true;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	4295	5101	.	-	.	ID=gene-C9F04_RS22260;Name=C9F04_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22260;old_locus_tag=C9F04_22995
NZ_PYKF01000717.1	Protein Homology	CDS	4295	5101	.	-	0	ID=cds-WP_001175241.1;Parent=gene-C9F04_RS22260;Dbxref=Genbank:WP_001175241.1;Name=WP_001175241.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=C9F04_RS22260;product=HPr family phosphocarrier protein;protein_id=WP_001175241.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	5088	6515	.	-	.	ID=gene-C9F04_RS22265;Name=C9F04_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22265;old_locus_tag=C9F04_23000
NZ_PYKF01000717.1	Protein Homology	CDS	5088	6515	.	-	0	ID=cds-WP_023204541.1;Parent=gene-C9F04_RS22265;Dbxref=Genbank:WP_023204541.1;Name=WP_023204541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=C9F04_RS22265;product=PTS fructose transporter subunit IIBC;protein_id=WP_023204541.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	6542	7456	.	-	.	ID=gene-C9F04_RS22270;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9F04_RS22270;old_locus_tag=C9F04_23005
NZ_PYKF01000717.1	Protein Homology	CDS	6542	7456	.	-	0	ID=cds-WP_001748603.1;Parent=gene-C9F04_RS22270;Dbxref=Genbank:WP_001748603.1;Name=WP_001748603.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=C9F04_RS22270;product=1-phosphofructokinase;protein_id=WP_001748603.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	7467	8321	.	-	.	ID=gene-C9F04_RS22275;Name=C9F04_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22275;old_locus_tag=C9F04_23010
NZ_PYKF01000717.1	Protein Homology	CDS	7467	8321	.	-	0	ID=cds-WP_000469985.1;Parent=gene-C9F04_RS22275;Dbxref=Genbank:WP_000469985.1;Name=WP_000469985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9F04_RS22275;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	8655	9488	.	+	.	ID=gene-C9F04_RS22280;Name=C9F04_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22280;old_locus_tag=C9F04_23015
NZ_PYKF01000717.1	Protein Homology	CDS	8655	9488	.	+	0	ID=cds-WP_001118363.1;Parent=gene-C9F04_RS22280;Dbxref=Genbank:WP_001118363.1;Name=WP_001118363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=C9F04_RS22280;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118363.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	9499	10446	.	+	.	ID=gene-C9F04_RS22285;Name=C9F04_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22285;old_locus_tag=C9F04_23020
NZ_PYKF01000717.1	Protein Homology	CDS	9499	10446	.	+	0	ID=cds-WP_001027807.1;Parent=gene-C9F04_RS22285;Dbxref=Genbank:WP_001027807.1;Name=WP_001027807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=C9F04_RS22285;product=sugar kinase;protein_id=WP_001027807.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	10686	12257	.	-	.	ID=gene-C9F04_RS22290;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9F04_RS22290;old_locus_tag=C9F04_23025
NZ_PYKF01000717.1	Protein Homology	CDS	10686	12257	.	-	0	ID=cds-WP_146713189.1;Parent=gene-C9F04_RS22290;Dbxref=Genbank:WP_146713189.1;Name=WP_146713189.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9F04_RS22290;product=galactarate dehydratase;protein_id=WP_146713189.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	12787	13557	.	+	.	ID=gene-C9F04_RS22295;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9F04_RS22295;old_locus_tag=C9F04_23030
NZ_PYKF01000717.1	Protein Homology	CDS	12787	13557	.	+	0	ID=cds-WP_001057715.1;Parent=gene-C9F04_RS22295;Dbxref=Genbank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9F04_RS22295;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	13583	14473	.	+	.	ID=gene-C9F04_RS22300;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F04_RS22300;old_locus_tag=C9F04_23035
NZ_PYKF01000717.1	Protein Homology	CDS	13583	14473	.	+	0	ID=cds-WP_000178106.1;Parent=gene-C9F04_RS22300;Dbxref=Genbank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F04_RS22300;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	14571	15716	.	+	.	ID=gene-C9F04_RS22305;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9F04_RS22305;old_locus_tag=C9F04_23040
NZ_PYKF01000717.1	Protein Homology	CDS	14571	15716	.	+	0	ID=cds-WP_146713190.1;Parent=gene-C9F04_RS22305;Dbxref=Genbank:WP_146713190.1;Name=WP_146713190.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9F04_RS22305;product=glycerate 2-kinase;protein_id=WP_146713190.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	15749	16123	.	+	.	ID=gene-C9F04_RS22310;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9F04_RS22310;old_locus_tag=C9F04_23045
NZ_PYKF01000717.1	cmsearch	RNase_P_RNA	15749	16123	.	+	.	ID=rna-C9F04_RS22310;Parent=gene-C9F04_RS22310;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS22310;product=RNase P RNA component class A
NZ_PYKF01000717.1	cmsearch	exon	15749	16123	.	+	.	ID=exon-C9F04_RS22310-1;Parent=rna-C9F04_RS22310;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS22310;product=RNase P RNA component class A
NZ_PYKF01000717.1	RefSeq	gene	17070	18008	.	+	.	ID=gene-C9F04_RS22320;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9F04_RS22320;old_locus_tag=C9F04_23060
NZ_PYKF01000717.1	Protein Homology	CDS	17070	18008	.	+	0	ID=cds-WP_001094907.1;Parent=gene-C9F04_RS22320;Dbxref=Genbank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9F04_RS22320;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	gene	18106	19095	.	+	.	ID=gene-C9F04_RS22325;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9F04_RS22325;old_locus_tag=C9F04_23065
NZ_PYKF01000717.1	Protein Homology	CDS	18106	19095	.	+	0	ID=cds-WP_000548368.1;Parent=gene-C9F04_RS22325;Dbxref=Genbank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9F04_RS22325;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11
NZ_PYKF01000717.1	RefSeq	pseudogene	19116	19474	.	+	.	ID=gene-C9F04_RS22330;Name=C9F04_RS22330;end_range=19474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22330;old_locus_tag=C9F04_23070;partial=true;pseudo=true
NZ_PYKF01000717.1	Protein Homology	CDS	19116	19474	.	+	0	ID=cds-C9F04_RS22330;Parent=gene-C9F04_RS22330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=19474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9F04_RS22330;partial=true;product=threonine/serine transporter TdcC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000713.1 1 4811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000713.1	RefSeq	region	1	4811	.	+	.	ID=NZ_PYKF01000713.1:1..4811;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000713.1	RefSeq	gene	1	1836	.	-	.	ID=gene-C9F04_RS22105;Name=C9F04_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22105;old_locus_tag=C9F04_22840;partial=true;start_range=.,1
NZ_PYKF01000713.1	Protein Homology	CDS	1	1836	.	-	0	ID=cds-WP_146713183.1;Parent=gene-C9F04_RS22105;Dbxref=Genbank:WP_146713183.1;Name=WP_146713183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9F04_RS22105;partial=true;product=YhdP family protein;protein_id=WP_146713183.1;start_range=.,1;transl_table=11
NZ_PYKF01000713.1	RefSeq	pseudogene	1943	3412	.	-	.	ID=gene-C9F04_RS22110;Name=rng;gbkey=Gene;gene=rng;gene_biotype=pseudogene;locus_tag=C9F04_RS22110;old_locus_tag=C9F04_22845;pseudo=true
NZ_PYKF01000713.1	Protein Homology	CDS	1943	3412	.	-	0	ID=cds-C9F04_RS22110;Parent=gene-C9F04_RS22110;Note=internal stop;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9F04_RS22110;product=ribonuclease G;pseudo=true;transl_table=11
NZ_PYKF01000713.1	RefSeq	gene	3402	3995	.	-	.	ID=gene-C9F04_RS22115;Name=C9F04_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22115;old_locus_tag=C9F04_22850
NZ_PYKF01000713.1	Protein Homology	CDS	3402	3995	.	-	0	ID=cds-WP_146713184.1;Parent=gene-C9F04_RS22115;Dbxref=Genbank:WP_146713184.1;Name=WP_146713184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9F04_RS22115;product=Maf-like protein;protein_id=WP_146713184.1;transl_table=11
NZ_PYKF01000713.1	RefSeq	gene	4004	4492	.	-	.	ID=gene-C9F04_RS22120;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F04_RS22120;old_locus_tag=C9F04_22855
NZ_PYKF01000713.1	Protein Homology	CDS	4004	4492	.	-	0	ID=cds-WP_000179403.1;Parent=gene-C9F04_RS22120;Dbxref=Genbank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9F04_RS22120;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11
NZ_PYKF01000713.1	RefSeq	pseudogene	4495	4811	.	-	.	ID=gene-C9F04_RS22125;Name=C9F04_RS22125;end_range=4811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22125;old_locus_tag=C9F04_22860;partial=true;pseudo=true
NZ_PYKF01000713.1	Protein Homology	CDS	4495	4811	.	-	2	ID=cds-C9F04_RS22125;Parent=gene-C9F04_RS22125;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9F04_RS22125;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000789.1 1 4789
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000789.1	RefSeq	region	1	4789	.	+	.	ID=NZ_PYKF01000789.1:1..4789;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000789.1	RefSeq	gene	1	371	.	-	.	ID=gene-C9F04_RS24620;Name=C9F04_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24620;old_locus_tag=C9F04_25465;partial=true;start_range=.,1
NZ_PYKF01000789.1	Protein Homology	CDS	1	371	.	-	0	ID=cds-WP_146713311.1;Parent=gene-C9F04_RS24620;Dbxref=Genbank:WP_146713311.1;Name=WP_146713311.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F04_RS24620;partial=true;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_146713311.1;start_range=.,1;transl_table=11
NZ_PYKF01000789.1	RefSeq	gene	379	1260	.	-	.	ID=gene-C9F04_RS24625;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9F04_RS24625;old_locus_tag=C9F04_25470
NZ_PYKF01000789.1	Protein Homology	CDS	379	1260	.	-	0	ID=cds-WP_061372244.1;Parent=gene-C9F04_RS24625;Dbxref=Genbank:WP_061372244.1;Name=WP_061372244.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9F04_RS24625;product=RNase AM;protein_id=WP_061372244.1;transl_table=11
NZ_PYKF01000789.1	RefSeq	gene	1382	1426	.	+	.	ID=gene-C9F04_RS24630;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9F04_RS24630;old_locus_tag=C9F04_25475
NZ_PYKF01000789.1	Protein Homology	CDS	1382	1426	.	+	0	ID=cds-WP_010989026.1;Parent=gene-C9F04_RS24630;Dbxref=Genbank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9F04_RS24630;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11
NZ_PYKF01000789.1	cmsearch	sequence_feature	1403	1498	.	+	.	ID=id-NZ_PYKF01000789.1:1403..1498;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000789.1	RefSeq	gene	1521	3083	.	+	.	ID=gene-C9F04_RS24635;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=C9F04_RS24635;old_locus_tag=C9F04_25480
NZ_PYKF01000789.1	Protein Homology	CDS	1521	3083	.	+	0	ID=cds-WP_135369654.1;Parent=gene-C9F04_RS24635;Dbxref=Genbank:WP_135369654.1;Name=WP_135369654.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9F04_RS24635;product=anthranilate synthase component I;protein_id=WP_135369654.1;transl_table=11
NZ_PYKF01000789.1	RefSeq	gene	3083	4678	.	+	.	ID=gene-C9F04_RS24640;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9F04_RS24640;old_locus_tag=C9F04_25485
NZ_PYKF01000789.1	Protein Homology	CDS	3083	4678	.	+	0	ID=cds-WP_000763489.1;Parent=gene-C9F04_RS24640;Dbxref=Genbank:WP_000763489.1;Name=WP_000763489.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9F04_RS24640;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763489.1;transl_table=11
NZ_PYKF01000789.1	RefSeq	gene	4682	4789	.	+	.	ID=gene-C9F04_RS27275;Name=C9F04_RS27275;end_range=4789,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27275;partial=true
NZ_PYKF01000789.1	Protein Homology	CDS	4682	4789	.	+	0	ID=cds-WP_261771503.1;Parent=gene-C9F04_RS27275;Dbxref=Genbank:WP_261771503.1;Name=WP_261771503.1;end_range=4789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9F04_RS27275;partial=true;product=hypothetical protein;protein_id=WP_261771503.1;transl_table=11
##sequence-region NZ_PYKF01000648.1 1 4766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000648.1	RefSeq	region	1	4766	.	+	.	ID=NZ_PYKF01000648.1:1..4766;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000648.1	RefSeq	gene	1	768	.	+	.	ID=gene-C9F04_RS19885;Name=C9F04_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19885;old_locus_tag=C9F04_20540;partial=true;start_range=.,1
NZ_PYKF01000648.1	Protein Homology	CDS	1	768	.	+	0	ID=cds-WP_146713065.1;Parent=gene-C9F04_RS19885;Dbxref=Genbank:WP_146713065.1;Name=WP_146713065.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240932.1;locus_tag=C9F04_RS19885;partial=true;product=BamA/TamA family outer membrane protein;protein_id=WP_146713065.1;start_range=.,1;transl_table=11
NZ_PYKF01000648.1	RefSeq	gene	891	1376	.	+	.	ID=gene-C9F04_RS19890;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9F04_RS19890;old_locus_tag=C9F04_20545
NZ_PYKF01000648.1	Protein Homology	CDS	891	1376	.	+	0	ID=cds-WP_000758966.1;Parent=gene-C9F04_RS19890;Dbxref=Genbank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9F04_RS19890;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11
NZ_PYKF01000648.1	RefSeq	gene	1380	2405	.	+	.	ID=gene-C9F04_RS19895;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9F04_RS19895;old_locus_tag=C9F04_20550
NZ_PYKF01000648.1	Protein Homology	CDS	1380	2405	.	+	0	ID=cds-WP_001139265.1;Parent=gene-C9F04_RS19895;Dbxref=Genbank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9F04_RS19895;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11
NZ_PYKF01000648.1	RefSeq	gene	2511	2966	.	+	.	ID=gene-C9F04_RS19900;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9F04_RS19900;old_locus_tag=C9F04_20555
NZ_PYKF01000648.1	Protein Homology	CDS	2511	2966	.	+	0	ID=cds-WP_000210741.1;Parent=gene-C9F04_RS19900;Dbxref=Genbank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9F04_RS19900;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11
NZ_PYKF01000648.1	RefSeq	gene	2970	3758	.	+	.	ID=gene-C9F04_RS19905;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9F04_RS19905;old_locus_tag=C9F04_20560
NZ_PYKF01000648.1	Protein Homology	CDS	2970	3758	.	+	0	ID=cds-WP_000565950.1;Parent=gene-C9F04_RS19905;Dbxref=Genbank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9F04_RS19905;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11
NZ_PYKF01000648.1	RefSeq	gene	3758	4766	.	+	.	ID=gene-C9F04_RS19910;Name=lpxB;end_range=4766,.;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9F04_RS19910;old_locus_tag=C9F04_20565;partial=true
NZ_PYKF01000648.1	Protein Homology	CDS	3758	4766	.	+	0	ID=cds-WP_146713066.1;Parent=gene-C9F04_RS19910;Dbxref=Genbank:WP_146713066.1;Name=WP_146713066.1;Ontology_term=GO:0009245,GO:0008915;end_range=4766,.;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9F04_RS19910;partial=true;product=lipid-A-disaccharide synthase;protein_id=WP_146713066.1;transl_table=11
##sequence-region NZ_PYKF01000210.1 1 4719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000210.1	RefSeq	region	1	4719	.	+	.	ID=NZ_PYKF01000210.1:1..4719;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000210.1	RefSeq	gene	1	816	.	+	.	ID=gene-C9F04_RS05135;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F04_RS05135;old_locus_tag=C9F04_05305;partial=true;start_range=.,1
NZ_PYKF01000210.1	Protein Homology	CDS	1	816	.	+	0	ID=cds-WP_146712374.1;Parent=gene-C9F04_RS05135;Dbxref=Genbank:WP_146712374.1;Name=WP_146712374.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9F04_RS05135;partial=true;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_146712374.1;start_range=.,1;transl_table=11
NZ_PYKF01000210.1	RefSeq	gene	846	1139	.	+	.	ID=gene-C9F04_RS05140;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F04_RS05140;old_locus_tag=C9F04_05310
NZ_PYKF01000210.1	Protein Homology	CDS	846	1139	.	+	0	ID=cds-WP_000691461.1;Parent=gene-C9F04_RS05140;Dbxref=Genbank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9F04_RS05140;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11
NZ_PYKF01000210.1	RefSeq	gene	1136	2005	.	+	.	ID=gene-C9F04_RS05145;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9F04_RS05145;old_locus_tag=C9F04_05315
NZ_PYKF01000210.1	Protein Homology	CDS	1136	2005	.	+	0	ID=cds-WP_001247811.1;Parent=gene-C9F04_RS05145;Dbxref=Genbank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9F04_RS05145;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11
NZ_PYKF01000210.1	RefSeq	pseudogene	2016	3536	.	+	.	ID=gene-C9F04_RS05150;Name=citF;gbkey=Gene;gene=citF;gene_biotype=pseudogene;locus_tag=C9F04_RS05150;old_locus_tag=C9F04_05320;pseudo=true
NZ_PYKF01000210.1	Protein Homology	CDS	2016	3536	.	+	0	ID=cds-C9F04_RS05150;Parent=gene-C9F04_RS05150;Note=internal stop;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9F04_RS05150;product=citrate lyase subunit alpha;pseudo=true;transl_table=11
NZ_PYKF01000210.1	RefSeq	gene	3536	4087	.	+	.	ID=gene-C9F04_RS05155;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F04_RS05155;old_locus_tag=C9F04_05325
NZ_PYKF01000210.1	Protein Homology	CDS	3536	4087	.	+	0	ID=cds-WP_135369436.1;Parent=gene-C9F04_RS05155;Dbxref=Genbank:WP_135369436.1;Name=WP_135369436.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9F04_RS05155;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369436.1;transl_table=11
NZ_PYKF01000210.1	RefSeq	pseudogene	4065	4719	.	+	.	ID=gene-C9F04_RS05160;Name=C9F04_RS05160;end_range=4719,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05160;old_locus_tag=C9F04_05330;partial=true;pseudo=true
NZ_PYKF01000210.1	Protein Homology	CDS	4065	4719	.	+	0	ID=cds-C9F04_RS05160;Parent=gene-C9F04_RS05160;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016310,GO:0005524,GO:0046917;end_range=4719,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9F04_RS05160;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000193.1 1 4713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000193.1	RefSeq	region	1	4713	.	+	.	ID=NZ_PYKF01000193.1:1..4713;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000193.1	RefSeq	gene	1	441	.	-	.	ID=gene-C9F04_RS04455;Name=C9F04_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04455;old_locus_tag=C9F04_04595;partial=true;start_range=.,1
NZ_PYKF01000193.1	Protein Homology	CDS	1	441	.	-	0	ID=cds-WP_186798996.1;Parent=gene-C9F04_RS04455;Dbxref=Genbank:WP_186798996.1;Name=WP_186798996.1;Ontology_term=GO:0016616,GO:0046872,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9F04_RS04455;partial=true;product=histidinol dehydrogenase;protein_id=WP_186798996.1;start_range=.,1;transl_table=11
NZ_PYKF01000193.1	RefSeq	gene	544	1443	.	-	.	ID=gene-C9F04_RS04460;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9F04_RS04460;old_locus_tag=C9F04_04600
NZ_PYKF01000193.1	Protein Homology	CDS	544	1443	.	-	0	ID=cds-WP_146712339.1;Parent=gene-C9F04_RS04460;Dbxref=Genbank:WP_146712339.1;Name=WP_146712339.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9F04_RS04460;product=ATP phosphoribosyltransferase;protein_id=WP_146712339.1;transl_table=11
NZ_PYKF01000193.1	cmsearch	sequence_feature	1490	1613	.	-	.	ID=id-NZ_PYKF01000193.1:1490..1613;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000193.1	RefSeq	gene	1589	1639	.	-	.	ID=gene-C9F04_RS04465;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9F04_RS04465;old_locus_tag=C9F04_04605
NZ_PYKF01000193.1	Protein Homology	CDS	1589	1639	.	-	0	ID=cds-WP_001364200.1;Parent=gene-C9F04_RS04465;Dbxref=Genbank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9F04_RS04465;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_PYKF01000193.1	RefSeq	gene	1802	2626	.	+	.	ID=gene-C9F04_RS04470;Name=C9F04_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04470;old_locus_tag=C9F04_04610
NZ_PYKF01000193.1	Protein Homology	CDS	1802	2626	.	+	0	ID=cds-WP_000754712.1;Parent=gene-C9F04_RS04470;Dbxref=Genbank:WP_000754712.1;Name=WP_000754712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9F04_RS04470;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11
NZ_PYKF01000193.1	RefSeq	gene	2672	3586	.	+	.	ID=gene-C9F04_RS04475;Name=C9F04_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04475;old_locus_tag=C9F04_04615
NZ_PYKF01000193.1	Protein Homology	CDS	2672	3586	.	+	0	ID=cds-WP_000803316.1;Parent=gene-C9F04_RS04475;Dbxref=Genbank:WP_000803316.1;Name=WP_000803316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9F04_RS04475;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11
NZ_PYKF01000193.1	RefSeq	gene	3820	3882	.	+	.	ID=gene-C9F04_RS04480;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9F04_RS04480;old_locus_tag=C9F04_04620
NZ_PYKF01000193.1	Protein Homology	CDS	3820	3882	.	+	0	ID=cds-WP_096335044.1;Parent=gene-C9F04_RS04480;Dbxref=Genbank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9F04_RS04480;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11
NZ_PYKF01000193.1	RefSeq	pseudogene	3872	4705	.	+	.	ID=gene-C9F04_RS04485;Name=plaP;end_range=4705,.;gbkey=Gene;gene=plaP;gene_biotype=pseudogene;locus_tag=C9F04_RS04485;old_locus_tag=C9F04_04625;partial=true;pseudo=true
NZ_PYKF01000193.1	Protein Homology	CDS	3872	4705	.	+	0	ID=cds-C9F04_RS04485;Parent=gene-C9F04_RS04485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4705,.;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9F04_RS04485;partial=true;product=putrescine/proton symporter PlaP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000309.1 1 4700
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000309.1	RefSeq	region	1	4700	.	+	.	ID=NZ_PYKF01000309.1:1..4700;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000309.1	RefSeq	gene	1	396	.	-	.	ID=gene-C9F04_RS09075;Name=C9F04_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09075;old_locus_tag=C9F04_09375;partial=true;start_range=.,1
NZ_PYKF01000309.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-WP_186799013.1;Parent=gene-C9F04_RS09075;Dbxref=Genbank:WP_186799013.1;Name=WP_186799013.1;Ontology_term=GO:0004176,GO:0004222,GO:0005524,GO:0008270,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA,ATP binding|0005524||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462207.1;locus_tag=C9F04_RS09075;partial=true;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=WP_186799013.1;start_range=.,1;transl_table=11
NZ_PYKF01000309.1	RefSeq	gene	500	1126	.	-	.	ID=gene-C9F04_RS09080;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9F04_RS09080;old_locus_tag=C9F04_09385
NZ_PYKF01000309.1	Protein Homology	CDS	500	1126	.	-	0	ID=cds-WP_146712525.1;Parent=gene-C9F04_RS09080;Dbxref=Genbank:WP_146712525.1;Name=WP_146712525.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9F04_RS09080;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_146712525.1;transl_table=11
NZ_PYKF01000309.1	RefSeq	gene	1253	1546	.	+	.	ID=gene-C9F04_RS09085;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9F04_RS09085;old_locus_tag=C9F04_09390
NZ_PYKF01000309.1	Protein Homology	CDS	1253	1546	.	+	0	ID=cds-WP_001592995.1;Parent=gene-C9F04_RS09085;Dbxref=Genbank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9F04_RS09085;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11
NZ_PYKF01000309.1	RefSeq	gene	1702	2178	.	-	.	ID=gene-C9F04_RS09090;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9F04_RS09090;old_locus_tag=C9F04_09395
NZ_PYKF01000309.1	Protein Homology	CDS	1702	2178	.	-	0	ID=cds-WP_001148008.1;Parent=gene-C9F04_RS09090;Dbxref=Genbank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9F04_RS09090;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11
NZ_PYKF01000309.1	RefSeq	gene	2426	3859	.	+	.	ID=gene-C9F04_RS09095;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9F04_RS09095;old_locus_tag=C9F04_09400
NZ_PYKF01000309.1	Protein Homology	CDS	2426	3859	.	+	0	ID=cds-WP_023195695.1;Parent=gene-C9F04_RS09095;Dbxref=Genbank:WP_023195695.1;Name=WP_023195695.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9F04_RS09095;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_023195695.1;transl_table=11
NZ_PYKF01000309.1	RefSeq	gene	3990	4700	.	-	.	ID=gene-C9F04_RS09100;Name=C9F04_RS09100;end_range=4700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09100;old_locus_tag=C9F04_09405;partial=true
NZ_PYKF01000309.1	Protein Homology	CDS	3990	4700	.	-	0	ID=cds-WP_186799014.1;Parent=gene-C9F04_RS09100;Dbxref=Genbank:WP_186799014.1;Name=WP_186799014.1;Ontology_term=GO:0005525;end_range=4700,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9F04_RS09100;partial=true;product=50S ribosome-binding GTPase;protein_id=WP_186799014.1;transl_table=11
##sequence-region NZ_PYKF01000015.1 1 4696
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000015.1	RefSeq	region	1	4696	.	+	.	ID=NZ_PYKF01000015.1:1..4696;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000015.1	RefSeq	gene	1	90	.	+	.	ID=gene-C9F04_RS00160;Name=C9F04_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00160;old_locus_tag=C9F04_00175;partial=true;start_range=.,1
NZ_PYKF01000015.1	Protein Homology	CDS	1	90	.	+	0	ID=cds-WP_186798972.1;Parent=gene-C9F04_RS00160;Dbxref=Genbank:WP_186798972.1;Name=WP_186798972.1;Ontology_term=GO:0055085,GO:0042626,GO:0005887,GO:0043190;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9F04_RS00160;partial=true;product=metal ABC transporter permease;protein_id=WP_186798972.1;start_range=.,1;transl_table=11
NZ_PYKF01000015.1	RefSeq	pseudogene	169	1179	.	-	.	ID=gene-C9F04_RS00165;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=pseudogene;locus_tag=C9F04_RS00165;old_locus_tag=C9F04_00180;pseudo=true
NZ_PYKF01000015.1	Protein Homology	CDS	169	1179	.	-	0	ID=cds-C9F04_RS00165;Parent=gene-C9F04_RS00165;Note=internal stop;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9F04_RS00165;product=Holliday junction branch migration DNA helicase RuvB;pseudo=true;transl_table=11
NZ_PYKF01000015.1	RefSeq	gene	1188	1799	.	-	.	ID=gene-C9F04_RS00170;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9F04_RS00170;old_locus_tag=C9F04_00185
NZ_PYKF01000015.1	Protein Homology	CDS	1188	1799	.	-	0	ID=cds-WP_000580335.1;Parent=gene-C9F04_RS00170;Dbxref=Genbank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9F04_RS00170;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11
NZ_PYKF01000015.1	RefSeq	gene	2159	2851	.	-	.	ID=gene-C9F04_RS00175;Name=C9F04_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00175;old_locus_tag=C9F04_00190
NZ_PYKF01000015.1	Protein Homology	CDS	2159	2851	.	-	0	ID=cds-WP_000227324.1;Parent=gene-C9F04_RS00175;Dbxref=Genbank:WP_000227324.1;Name=WP_000227324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=C9F04_RS00175;product=hypothetical protein;protein_id=WP_000227324.1;transl_table=11
NZ_PYKF01000015.1	RefSeq	gene	3061	3657	.	+	.	ID=gene-C9F04_RS00180;Name=C9F04_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00180;old_locus_tag=C9F04_00195
NZ_PYKF01000015.1	Protein Homology	CDS	3061	3657	.	+	0	ID=cds-WP_000716751.1;Parent=gene-C9F04_RS00180;Dbxref=Genbank:WP_000716751.1;Name=WP_000716751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=C9F04_RS00180;product=YebB family permuted papain-like enzyme;protein_id=WP_000716751.1;transl_table=11
NZ_PYKF01000015.1	RefSeq	gene	3757	4524	.	-	.	ID=gene-C9F04_RS00185;Name=C9F04_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00185;old_locus_tag=C9F04_00200
NZ_PYKF01000015.1	Protein Homology	CDS	3757	4524	.	-	0	ID=cds-WP_261770722.1;Parent=gene-C9F04_RS00185;Dbxref=Genbank:WP_261770722.1;Name=WP_261770722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024257.2;locus_tag=C9F04_RS00185;product=substrate-binding domain-containing protein;protein_id=WP_261770722.1;transl_table=11
##sequence-region NZ_PYKF01000286.1 1 4658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000286.1	RefSeq	region	1	4658	.	+	.	ID=NZ_PYKF01000286.1:1..4658;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000286.1	RefSeq	pseudogene	51	404	.	+	.	ID=gene-C9F04_RS08315;Name=C9F04_RS08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08315;old_locus_tag=C9F04_08590;partial=true;pseudo=true;start_range=.,51
NZ_PYKF01000286.1	Protein Homology	CDS	51	404	.	+	0	ID=cds-C9F04_RS08315;Parent=gene-C9F04_RS08315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9F04_RS08315;partial=true;product=AI-2E family transporter;pseudo=true;start_range=.,51;transl_table=11
NZ_PYKF01000286.1	RefSeq	gene	680	1867	.	+	.	ID=gene-C9F04_RS08320;Name=C9F04_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08320;old_locus_tag=C9F04_08595
NZ_PYKF01000286.1	Protein Homology	CDS	680	1867	.	+	0	ID=cds-WP_135369673.1;Parent=gene-C9F04_RS08320;Dbxref=Genbank:WP_135369673.1;Name=WP_135369673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9F04_RS08320;product=helix-turn-helix domain-containing protein;protein_id=WP_135369673.1;transl_table=11
NZ_PYKF01000286.1	RefSeq	gene	1935	3203	.	+	.	ID=gene-C9F04_RS08325;Name=C9F04_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08325;old_locus_tag=C9F04_08600
NZ_PYKF01000286.1	Protein Homology	CDS	1935	3203	.	+	0	ID=cds-WP_000200859.1;Parent=gene-C9F04_RS08325;Dbxref=Genbank:WP_000200859.1;Name=WP_000200859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9F04_RS08325;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11
NZ_PYKF01000286.1	RefSeq	pseudogene	3209	4385	.	+	.	ID=gene-C9F04_RS08330;Name=C9F04_RS08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08330;old_locus_tag=C9F04_08605;pseudo=true
NZ_PYKF01000286.1	Protein Homology	CDS	3209	4385	.	+	0	ID=cds-C9F04_RS08330;Parent=gene-C9F04_RS08330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9F04_RS08330;product=glycerate kinase;pseudo=true;transl_table=11
NZ_PYKF01000286.1	RefSeq	gene	4432	4658	.	-	.	ID=gene-C9F04_RS08335;Name=C9F04_RS08335;end_range=4658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08335;old_locus_tag=C9F04_08610;partial=true
NZ_PYKF01000286.1	Protein Homology	CDS	4432	4658	.	-	2	ID=cds-WP_146712496.1;Parent=gene-C9F04_RS08335;Dbxref=Genbank:WP_146712496.1;Name=WP_146712496.1;Ontology_term=GO:0016209,GO:0016491;end_range=4658,.;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9F04_RS08335;partial=true;product=redoxin domain-containing protein;protein_id=WP_146712496.1;transl_table=11
##sequence-region NZ_PYKF01000159.1 1 4618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000159.1	RefSeq	region	1	4618	.	+	.	ID=NZ_PYKF01000159.1:1..4618;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000159.1	RefSeq	gene	1	397	.	-	.	ID=gene-C9F04_RS03340;Name=C9F04_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03340;old_locus_tag=C9F04_03450;partial=true;start_range=.,1
NZ_PYKF01000159.1	Protein Homology	CDS	1	397	.	-	0	ID=cds-WP_146712291.1;Parent=gene-C9F04_RS03340;Dbxref=Genbank:WP_146712291.1;Name=WP_146712291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=C9F04_RS03340;partial=true;product=KilA-N domain-containing protein;protein_id=WP_146712291.1;start_range=.,1;transl_table=11
NZ_PYKF01000159.1	RefSeq	gene	414	803	.	-	.	ID=gene-C9F04_RS03345;Name=C9F04_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03345;old_locus_tag=C9F04_03455
NZ_PYKF01000159.1	Protein Homology	CDS	414	803	.	-	0	ID=cds-WP_135369298.1;Parent=gene-C9F04_RS03345;Dbxref=Genbank:WP_135369298.1;Name=WP_135369298.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=C9F04_RS03345;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_135369298.1;transl_table=11
NZ_PYKF01000159.1	RefSeq	gene	800	2734	.	-	.	ID=gene-C9F04_RS03350;Name=C9F04_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03350;old_locus_tag=C9F04_03460
NZ_PYKF01000159.1	Protein Homology	CDS	800	2734	.	-	0	ID=cds-WP_146712292.1;Parent=gene-C9F04_RS03350;Dbxref=Genbank:WP_146712292.1;Name=WP_146712292.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=C9F04_RS03350;product=DNA cytosine methyltransferase;protein_id=WP_146712292.1;transl_table=11
NZ_PYKF01000159.1	RefSeq	gene	2727	3605	.	-	.	ID=gene-C9F04_RS03355;Name=C9F04_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03355;old_locus_tag=C9F04_03465
NZ_PYKF01000159.1	Protein Homology	CDS	2727	3605	.	-	0	ID=cds-WP_046722474.1;Parent=gene-C9F04_RS03355;Dbxref=Genbank:WP_046722474.1;Name=WP_046722474.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762302.1;locus_tag=C9F04_RS03355;product=phage N-6-adenine-methyltransferase;protein_id=WP_046722474.1;transl_table=11
NZ_PYKF01000159.1	RefSeq	gene	3605	4087	.	-	.	ID=gene-C9F04_RS03360;Name=C9F04_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03360;old_locus_tag=C9F04_03470
NZ_PYKF01000159.1	Protein Homology	CDS	3605	4087	.	-	0	ID=cds-WP_001669427.1;Parent=gene-C9F04_RS03360;Dbxref=Genbank:WP_001669427.1;Name=WP_001669427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531318.1;locus_tag=C9F04_RS03360;product=PerC family transcriptional regulator;protein_id=WP_001669427.1;transl_table=11
NZ_PYKF01000159.1	RefSeq	pseudogene	4089	4618	.	-	.	ID=gene-C9F04_RS03365;Name=C9F04_RS03365;end_range=4618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03365;old_locus_tag=C9F04_03475;partial=true;pseudo=true
NZ_PYKF01000159.1	Protein Homology	CDS	4089	4618	.	-	2	ID=cds-C9F04_RS03365;Parent=gene-C9F04_RS03365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=C9F04_RS03365;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000055.1 1 4610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000055.1	RefSeq	region	1	4610	.	+	.	ID=NZ_PYKF01000055.1:1..4610;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000055.1	RefSeq	gene	1	301	.	-	.	ID=gene-C9F04_RS01000;Name=C9F04_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01000;old_locus_tag=C9F04_01060;partial=true;start_range=.,1
NZ_PYKF01000055.1	Protein Homology	CDS	1	301	.	-	0	ID=cds-WP_146712173.1;Parent=gene-C9F04_RS01000;Dbxref=Genbank:WP_146712173.1;Name=WP_146712173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9F04_RS01000;partial=true;product=molybdenum cofactor guanylyltransferase;protein_id=WP_146712173.1;start_range=.,1;transl_table=11
NZ_PYKF01000055.1	RefSeq	gene	371	640	.	+	.	ID=gene-C9F04_RS01005;Name=C9F04_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01005;old_locus_tag=C9F04_01065
NZ_PYKF01000055.1	Protein Homology	CDS	371	640	.	+	0	ID=cds-WP_000649858.1;Parent=gene-C9F04_RS01005;Dbxref=Genbank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9F04_RS01005;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11
NZ_PYKF01000055.1	RefSeq	gene	720	1706	.	+	.	ID=gene-C9F04_RS01010;Name=C9F04_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01010;old_locus_tag=C9F04_01070
NZ_PYKF01000055.1	Protein Homology	CDS	720	1706	.	+	0	ID=cds-WP_000999264.1;Parent=gene-C9F04_RS01010;Dbxref=Genbank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9F04_RS01010;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11
NZ_PYKF01000055.1	RefSeq	gene	1723	2346	.	+	.	ID=gene-C9F04_RS01015;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9F04_RS01015;old_locus_tag=C9F04_01075
NZ_PYKF01000055.1	Protein Homology	CDS	1723	2346	.	+	0	ID=cds-WP_000725364.1;Parent=gene-C9F04_RS01015;Dbxref=Genbank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9F04_RS01015;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11
NZ_PYKF01000055.1	RefSeq	gene	2359	3267	.	-	.	ID=gene-C9F04_RS01020;Name=C9F04_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01020;old_locus_tag=C9F04_01080
NZ_PYKF01000055.1	Protein Homology	CDS	2359	3267	.	-	0	ID=cds-WP_079802097.1;Parent=gene-C9F04_RS01020;Dbxref=Genbank:WP_079802097.1;Name=WP_079802097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954815.1;locus_tag=C9F04_RS01020;product=acyltransferase;protein_id=WP_079802097.1;transl_table=11
NZ_PYKF01000055.1	RefSeq	pseudogene	3655	4610	.	+	.	ID=gene-C9F04_RS01025;Name=C9F04_RS01025;end_range=4610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01025;old_locus_tag=C9F04_01090;partial=true;pseudo=true
NZ_PYKF01000055.1	Protein Homology	CDS	3655	4610	.	+	0	ID=cds-C9F04_RS01025;Parent=gene-C9F04_RS01025;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9F04_RS01025;partial=true;product=DNA polymerase I;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000285.1 1 18475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000285.1	RefSeq	region	1	18475	.	+	.	ID=NZ_PYKF01000285.1:1..18475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000285.1	RefSeq	gene	194	763	.	+	.	ID=gene-C9F04_RS08185;Name=C9F04_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08185;old_locus_tag=C9F04_08460
NZ_PYKF01000285.1	Protein Homology	CDS	194	763	.	+	0	ID=cds-WP_000024796.1;Parent=gene-C9F04_RS08185;Dbxref=Genbank:WP_000024796.1;Name=WP_000024796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9F04_RS08185;product=VOC family protein;protein_id=WP_000024796.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	783	1529	.	+	.	ID=gene-C9F04_RS08190;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9F04_RS08190;old_locus_tag=C9F04_08465
NZ_PYKF01000285.1	Protein Homology	CDS	783	1529	.	+	0	ID=cds-WP_001185780.1;Parent=gene-C9F04_RS08190;Dbxref=Genbank:WP_001185780.1;Name=WP_001185780.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9F04_RS08190;product=copper homeostasis protein CutC;protein_id=WP_001185780.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	1765	2736	.	-	.	ID=gene-C9F04_RS08195;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9F04_RS08195;old_locus_tag=C9F04_08470
NZ_PYKF01000285.1	Protein Homology	CDS	1765	2736	.	-	0	ID=cds-WP_031605237.1;Parent=gene-C9F04_RS08195;Dbxref=Genbank:WP_031605237.1;Name=WP_031605237.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9F04_RS08195;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_031605237.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	2733	3476	.	-	.	ID=gene-C9F04_RS08200;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9F04_RS08200;old_locus_tag=C9F04_08475
NZ_PYKF01000285.1	Protein Homology	CDS	2733	3476	.	-	0	ID=cds-WP_000019607.1;Parent=gene-C9F04_RS08200;Dbxref=Genbank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9F04_RS08200;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	3517	3912	.	-	.	ID=gene-C9F04_RS08205;Name=C9F04_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08205;old_locus_tag=C9F04_08480
NZ_PYKF01000285.1	Protein Homology	CDS	3517	3912	.	-	0	ID=cds-WP_000252975.1;Parent=gene-C9F04_RS08205;Dbxref=Genbank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9F04_RS08205;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	3965	4060	.	-	.	ID=gene-C9F04_RS26975;Name=C9F04_RS26975;end_range=4060,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26975;partial=true;pseudo=true
NZ_PYKF01000285.1	Protein Homology	CDS	3965	4060	.	-	0	ID=cds-C9F04_RS26975;Parent=gene-C9F04_RS26975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9F04_RS26975;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	4023	6100	.	+	.	ID=gene-C9F04_RS08210;Name=C9F04_RS08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08210;old_locus_tag=C9F04_08485;pseudo=true
NZ_PYKF01000285.1	Protein Homology	CDS	4023	6100	.	+	0	ID=cds-C9F04_RS08210;Parent=gene-C9F04_RS08210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9F04_RS08210;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	6100	6684	.	+	.	ID=gene-C9F04_RS08215;Name=C9F04_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08215;old_locus_tag=C9F04_08490
NZ_PYKF01000285.1	Protein Homology	CDS	6100	6684	.	+	0	ID=cds-WP_135369337.1;Parent=gene-C9F04_RS08215;Dbxref=Genbank:WP_135369337.1;Name=WP_135369337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9F04_RS08215;product=tail fiber assembly protein;protein_id=WP_135369337.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	6781	6981	.	-	.	ID=gene-C9F04_RS08220;Name=C9F04_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08220;old_locus_tag=C9F04_08495
NZ_PYKF01000285.1	Protein Homology	CDS	6781	6981	.	-	0	ID=cds-WP_033578003.1;Parent=gene-C9F04_RS08220;Dbxref=Genbank:WP_033578003.1;Name=WP_033578003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9F04_RS08220;product=phage virulence factor PagK family protein;protein_id=WP_033578003.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	7371	7551	.	-	.	ID=gene-C9F04_RS26980;Name=C9F04_RS26980;end_range=7551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26980;partial=true;pseudo=true;start_range=.,7371
NZ_PYKF01000285.1	Protein Homology	CDS	7371	7551	.	-	0	ID=cds-C9F04_RS26980;Parent=gene-C9F04_RS26980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F04_RS26980;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,7371;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	7542	7649	.	+	.	ID=gene-C9F04_RS26985;Name=C9F04_RS26985;end_range=7649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26985;old_locus_tag=C9F04_08505;partial=true;pseudo=true;start_range=.,7542
NZ_PYKF01000285.1	Protein Homology	CDS	7542	7649	.	+	0	ID=cds-C9F04_RS26985;Parent=gene-C9F04_RS26985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540054.1;locus_tag=C9F04_RS26985;partial=true;product=arsenic transporter;pseudo=true;start_range=.,7542;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	8009	8885	.	+	.	ID=gene-C9F04_RS08235;Name=C9F04_RS08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08235;old_locus_tag=C9F04_08510;pseudo=true
NZ_PYKF01000285.1	Protein Homology	CDS	8009	8885	.	+	0	ID=cds-C9F04_RS08235;Parent=gene-C9F04_RS08235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F04_RS08235;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	9093	10973	.	+	.	ID=gene-C9F04_RS08240;Name=C9F04_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08240;old_locus_tag=C9F04_08515
NZ_PYKF01000285.1	Protein Homology	CDS	9093	10973	.	+	0	ID=cds-WP_261770764.1;Parent=gene-C9F04_RS08240;Dbxref=Genbank:WP_261770764.1;Name=WP_261770764.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=C9F04_RS08240;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_261770764.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	11007	11105	.	+	.	ID=gene-C9F04_RS08245;Name=C9F04_RS08245;end_range=11105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08245;old_locus_tag=C9F04_08520;partial=true;pseudo=true;start_range=.,11007
NZ_PYKF01000285.1	Protein Homology	CDS	11007	11105	.	+	0	ID=cds-C9F04_RS08245;Parent=gene-C9F04_RS08245;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F04_RS08245;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,11007;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	11115	11643	.	+	.	ID=gene-C9F04_RS08250;Name=C9F04_RS08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08250;old_locus_tag=C9F04_08525;partial=true;pseudo=true;start_range=.,11115
NZ_PYKF01000285.1	Protein Homology	CDS	11115	11643	.	+	0	ID=cds-C9F04_RS08250;Parent=gene-C9F04_RS08250;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9F04_RS08250;partial=true;product=transposase;pseudo=true;start_range=.,11115;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	11789	11929	.	-	.	ID=gene-C9F04_RS08255;Name=C9F04_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08255;old_locus_tag=C9F04_08530
NZ_PYKF01000285.1	Protein Homology	CDS	11789	11929	.	-	0	ID=cds-WP_045899713.1;Parent=gene-C9F04_RS08255;Dbxref=Genbank:WP_045899713.1;Name=WP_045899713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9F04_RS08255;product=hypothetical protein;protein_id=WP_045899713.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	12095	12363	.	-	.	ID=gene-C9F04_RS08260;Name=C9F04_RS08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08260;old_locus_tag=C9F04_08535;pseudo=true
NZ_PYKF01000285.1	Protein Homology	CDS	12095	12363	.	-	0	ID=cds-C9F04_RS08260;Parent=gene-C9F04_RS08260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9F04_RS08260;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	12733	13152	.	+	.	ID=gene-C9F04_RS08270;Name=C9F04_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08270;old_locus_tag=C9F04_08545
NZ_PYKF01000285.1	Protein Homology	CDS	12733	13152	.	+	0	ID=cds-WP_080211977.1;Parent=gene-C9F04_RS08270;Dbxref=Genbank:WP_080211977.1;Name=WP_080211977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9F04_RS08270;product=GNAT family N-acetyltransferase;protein_id=WP_080211977.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	13540	14016	.	-	.	ID=gene-C9F04_RS08275;Name=C9F04_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08275;old_locus_tag=C9F04_08550
NZ_PYKF01000285.1	Protein Homology	CDS	13540	14016	.	-	0	ID=cds-WP_023194965.1;Parent=gene-C9F04_RS08275;Dbxref=Genbank:WP_023194965.1;Name=WP_023194965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9F04_RS08275;product=hypothetical protein;protein_id=WP_023194965.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	14345	14740	.	-	.	ID=gene-C9F04_RS08280;Name=C9F04_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08280;old_locus_tag=C9F04_08555
NZ_PYKF01000285.1	Protein Homology	CDS	14345	14740	.	-	0	ID=cds-WP_000422887.1;Parent=gene-C9F04_RS08280;Dbxref=Genbank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9F04_RS08280;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	15425	16147	.	+	.	ID=gene-C9F04_RS08285;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9F04_RS08285;old_locus_tag=C9F04_08560
NZ_PYKF01000285.1	Protein Homology	CDS	15425	16147	.	+	0	ID=cds-WP_135369185.1;Parent=gene-C9F04_RS08285;Dbxref=Genbank:WP_135369185.1;Name=WP_135369185.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9F04_RS08285;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_135369185.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	16432	16596	.	+	.	ID=gene-C9F04_RS08290;Name=C9F04_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08290;old_locus_tag=C9F04_08565
NZ_PYKF01000285.1	Protein Homology	CDS	16432	16596	.	+	0	ID=cds-WP_001134853.1;Parent=gene-C9F04_RS08290;Dbxref=Genbank:WP_001134853.1;Name=WP_001134853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9F04_RS08290;product=hypothetical protein;protein_id=WP_001134853.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	16820	17470	.	+	.	ID=gene-C9F04_RS08295;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9F04_RS08295;old_locus_tag=C9F04_08570
NZ_PYKF01000285.1	Protein Homology	CDS	16820	17470	.	+	0	ID=cds-WP_023226864.1;Parent=gene-C9F04_RS08295;Dbxref=Genbank:WP_023226864.1;Name=WP_023226864.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9F04_RS08295;product=protein-serine/threonine phosphatase;protein_id=WP_023226864.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	17489	17680	.	-	.	ID=gene-C9F04_RS08300;Name=C9F04_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08300;old_locus_tag=C9F04_08575
NZ_PYKF01000285.1	Protein Homology	CDS	17489	17680	.	-	0	ID=cds-WP_000457838.1;Parent=gene-C9F04_RS08300;Dbxref=Genbank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9F04_RS08300;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	gene	17791	18027	.	-	.	ID=gene-C9F04_RS08305;Name=C9F04_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08305;old_locus_tag=C9F04_08580
NZ_PYKF01000285.1	Protein Homology	CDS	17791	18027	.	-	0	ID=cds-WP_024131167.1;Parent=gene-C9F04_RS08305;Dbxref=Genbank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9F04_RS08305;product=DUF1480 family protein;protein_id=WP_024131167.1;transl_table=11
NZ_PYKF01000285.1	RefSeq	pseudogene	18145	18475	.	-	.	ID=gene-C9F04_RS08310;Name=yebU;end_range=18475,.;gbkey=Gene;gene=yebU;gene_biotype=pseudogene;locus_tag=C9F04_RS08310;old_locus_tag=C9F04_08585;partial=true;pseudo=true
NZ_PYKF01000285.1	Protein Homology	CDS	18145	18475	.	-	1	ID=cds-C9F04_RS08310;Parent=gene-C9F04_RS08310;Note=in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=18475,.;gbkey=CDS;gene=yebU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9F04_RS08310;partial=true;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000464.1 1 4595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000464.1	RefSeq	region	1	4595	.	+	.	ID=NZ_PYKF01000464.1:1..4595;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000464.1	RefSeq	pseudogene	1	379	.	+	.	ID=gene-C9F04_RS13965;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=pseudogene;locus_tag=C9F04_RS13965;old_locus_tag=C9F04_14415;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000464.1	Protein Homology	CDS	1	379	.	+	1	ID=cds-C9F04_RS13965;Parent=gene-C9F04_RS13965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9F04_RS13965;partial=true;product=peptide ABC transporter ATP-binding protein SapF;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	395	1102	.	-	.	ID=gene-C9F04_RS13970;Name=C9F04_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13970;old_locus_tag=C9F04_14420
NZ_PYKF01000464.1	Protein Homology	CDS	395	1102	.	-	0	ID=cds-WP_146712780.1;Parent=gene-C9F04_RS13970;Dbxref=Genbank:WP_146712780.1;Name=WP_146712780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9F04_RS13970;product=EAL domain-containing protein;protein_id=WP_146712780.1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	1568	2941	.	-	.	ID=gene-C9F04_RS13975;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9F04_RS13975;old_locus_tag=C9F04_14425
NZ_PYKF01000464.1	Protein Homology	CDS	1568	2941	.	-	0	ID=cds-WP_135420207.1;Parent=gene-C9F04_RS13975;Dbxref=Genbank:WP_135420207.1;Name=WP_135420207.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9F04_RS13975;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_135420207.1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	2976	3155	.	+	.	ID=gene-C9F04_RS13980;Name=C9F04_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13980;old_locus_tag=C9F04_14430
NZ_PYKF01000464.1	Protein Homology	CDS	2976	3155	.	+	0	ID=cds-WP_010989024.1;Parent=gene-C9F04_RS13980;Dbxref=Genbank:WP_010989024.1;Name=WP_010989024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9F04_RS13980;product=hypothetical protein;protein_id=WP_010989024.1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	3130	3429	.	+	.	ID=gene-C9F04_RS13985;Name=C9F04_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13985;old_locus_tag=C9F04_14435
NZ_PYKF01000464.1	Protein Homology	CDS	3130	3429	.	+	0	ID=cds-WP_129397197.1;Parent=gene-C9F04_RS13985;Dbxref=Genbank:WP_129397197.1;Name=WP_129397197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9F04_RS13985;product=hypothetical protein;protein_id=WP_129397197.1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	3547	4335	.	+	.	ID=gene-C9F04_RS13990;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9F04_RS13990;old_locus_tag=C9F04_14440
NZ_PYKF01000464.1	Protein Homology	CDS	3547	4335	.	+	0	ID=cds-WP_000506501.1;Parent=gene-C9F04_RS13990;Dbxref=Genbank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9F04_RS13990;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11
NZ_PYKF01000464.1	RefSeq	gene	4535	4595	.	+	.	ID=gene-C9F04_RS27050;Name=C9F04_RS27050;end_range=4595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27050;partial=true
NZ_PYKF01000464.1	Protein Homology	CDS	4535	4595	.	+	0	ID=cds-WP_261771146.1;Parent=gene-C9F04_RS27050;Dbxref=Genbank:WP_261771146.1;Name=WP_261771146.1;end_range=4595,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9F04_RS27050;partial=true;product=hypothetical protein;protein_id=WP_261771146.1;transl_table=11
##sequence-region NZ_PYKF01000665.1 1 4586
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000665.1	RefSeq	region	1	4586	.	+	.	ID=NZ_PYKF01000665.1:1..4586;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000665.1	RefSeq	gene	1	391	.	+	.	ID=gene-C9F04_RS20360;Name=C9F04_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20360;old_locus_tag=C9F04_21025;partial=true;start_range=.,1
NZ_PYKF01000665.1	Protein Homology	CDS	1	391	.	+	1	ID=cds-WP_146713086.1;Parent=gene-C9F04_RS20360;Dbxref=Genbank:WP_146713086.1;Name=WP_146713086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9F04_RS20360;partial=true;product=DcrB family lipoprotein;protein_id=WP_146713086.1;start_range=.,1;transl_table=11
NZ_PYKF01000665.1	RefSeq	gene	395	1654	.	-	.	ID=gene-C9F04_RS20365;Name=C9F04_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20365;old_locus_tag=C9F04_21030
NZ_PYKF01000665.1	Protein Homology	CDS	395	1654	.	-	0	ID=cds-WP_146713087.1;Parent=gene-C9F04_RS20365;Dbxref=Genbank:WP_146713087.1;Name=WP_146713087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9F04_RS20365;product=MFS transporter;protein_id=WP_146713087.1;transl_table=11
NZ_PYKF01000665.1	RefSeq	gene	1744	2793	.	+	.	ID=gene-C9F04_RS20370;Name=C9F04_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20370;old_locus_tag=C9F04_21035
NZ_PYKF01000665.1	Protein Homology	CDS	1744	2793	.	+	0	ID=cds-WP_000179589.1;Parent=gene-C9F04_RS20370;Dbxref=Genbank:WP_000179589.1;Name=WP_000179589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9F04_RS20370;product=AI-2E family transporter;protein_id=WP_000179589.1;transl_table=11
NZ_PYKF01000665.1	RefSeq	gene	2845	3423	.	+	.	ID=gene-C9F04_RS20375;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9F04_RS20375;old_locus_tag=C9F04_21040
NZ_PYKF01000665.1	Protein Homology	CDS	2845	3423	.	+	0	ID=cds-WP_045342439.1;Parent=gene-C9F04_RS20375;Dbxref=Genbank:WP_045342439.1;Name=WP_045342439.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9F04_RS20375;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_045342439.1;transl_table=11
NZ_PYKF01000665.1	RefSeq	gene	3515	3916	.	+	.	ID=gene-C9F04_RS20380;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9F04_RS20380;old_locus_tag=C9F04_21045
NZ_PYKF01000665.1	Protein Homology	CDS	3515	3916	.	+	0	ID=cds-WP_135369630.1;Parent=gene-C9F04_RS20380;Dbxref=Genbank:WP_135369630.1;Name=WP_135369630.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9F04_RS20380;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_135369630.1;transl_table=11
NZ_PYKF01000665.1	RefSeq	gene	4018	4586	.	-	.	ID=gene-C9F04_RS20385;Name=C9F04_RS20385;end_range=4586,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20385;old_locus_tag=C9F04_21050;partial=true
NZ_PYKF01000665.1	Protein Homology	CDS	4018	4586	.	-	2	ID=cds-WP_146713088.1;Parent=gene-C9F04_RS20385;Dbxref=Genbank:WP_146713088.1;Name=WP_146713088.1;end_range=4586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F04_RS20385;partial=true;product=ABC transporter permease;protein_id=WP_146713088.1;transl_table=11
##sequence-region NZ_PYKF01000719.1 1 4582
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000719.1	RefSeq	region	1	4582	.	+	.	ID=NZ_PYKF01000719.1:1..4582;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000719.1	RefSeq	pseudogene	30	380	.	-	.	ID=gene-C9F04_RS22345;Name=C9F04_RS22345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22345;old_locus_tag=C9F04_23085;partial=true;pseudo=true;start_range=.,30
NZ_PYKF01000719.1	Protein Homology	CDS	30	380	.	-	0	ID=cds-C9F04_RS22345;Parent=gene-C9F04_RS22345;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9F04_RS22345;partial=true;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;pseudo=true;start_range=.,30;transl_table=11
NZ_PYKF01000719.1	RefSeq	gene	499	1302	.	+	.	ID=gene-C9F04_RS22350;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9F04_RS22350;old_locus_tag=C9F04_23090
NZ_PYKF01000719.1	Protein Homology	CDS	499	1302	.	+	0	ID=cds-WP_146713192.1;Parent=gene-C9F04_RS22350;Dbxref=Genbank:WP_146713192.1;Name=WP_146713192.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9F04_RS22350;product=inositol-1-monophosphatase;protein_id=WP_146713192.1;transl_table=11
NZ_PYKF01000719.1	RefSeq	gene	1447	2325	.	+	.	ID=gene-C9F04_RS22355;Name=C9F04_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22355;old_locus_tag=C9F04_23095
NZ_PYKF01000719.1	Protein Homology	CDS	1447	2325	.	+	0	ID=cds-WP_000174944.1;Parent=gene-C9F04_RS22355;Dbxref=Genbank:WP_000174944.1;Name=WP_000174944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9F04_RS22355;product=alpha/beta hydrolase;protein_id=WP_000174944.1;transl_table=11
NZ_PYKF01000719.1	RefSeq	gene	2507	3550	.	+	.	ID=gene-C9F04_RS22360;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=C9F04_RS22360;old_locus_tag=C9F04_23100
NZ_PYKF01000719.1	Protein Homology	CDS	2507	3550	.	+	0	ID=cds-WP_146713193.1;Parent=gene-C9F04_RS22360;Dbxref=Genbank:WP_146713193.1;Name=WP_146713193.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9F04_RS22360;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_146713193.1;transl_table=11
NZ_PYKF01000719.1	RefSeq	gene	3554	4372	.	+	.	ID=gene-C9F04_RS22365;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9F04_RS22365;old_locus_tag=C9F04_23105
NZ_PYKF01000719.1	Protein Homology	CDS	3554	4372	.	+	0	ID=cds-WP_146713194.1;Parent=gene-C9F04_RS22365;Dbxref=Genbank:WP_146713194.1;Name=WP_146713194.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9F04_RS22365;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_146713194.1;transl_table=11
NZ_PYKF01000719.1	RefSeq	pseudogene	4383	4582	.	+	.	ID=gene-C9F04_RS22370;Name=C9F04_RS22370;end_range=4582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22370;old_locus_tag=C9F04_23110;partial=true;pseudo=true
NZ_PYKF01000719.1	Protein Homology	CDS	4383	4582	.	+	0	ID=cds-C9F04_RS22370;Parent=gene-C9F04_RS22370;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9F04_RS22370;partial=true;product=sulfite reductase subunit C;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000306.1 1 4571
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000306.1	RefSeq	region	1	4571	.	+	.	ID=NZ_PYKF01000306.1:1..4571;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000306.1	RefSeq	gene	1	843	.	-	.	ID=gene-C9F04_RS09025;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F04_RS09025;old_locus_tag=C9F04_09325;partial=true;start_range=.,1
NZ_PYKF01000306.1	Protein Homology	CDS	1	843	.	-	0	ID=cds-WP_146712523.1;Parent=gene-C9F04_RS09025;Dbxref=Genbank:WP_146712523.1;Name=WP_146712523.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9F04_RS09025;partial=true;product=archaetidylserine decarboxylase;protein_id=WP_146712523.1;start_range=.,1;transl_table=11
NZ_PYKF01000306.1	RefSeq	gene	935	1987	.	-	.	ID=gene-C9F04_RS09030;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9F04_RS09030;old_locus_tag=C9F04_09330
NZ_PYKF01000306.1	Protein Homology	CDS	935	1987	.	-	0	ID=cds-WP_000041945.1;Parent=gene-C9F04_RS09030;Dbxref=Genbank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9F04_RS09030;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11
NZ_PYKF01000306.1	RefSeq	gene	2094	2639	.	+	.	ID=gene-C9F04_RS09035;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9F04_RS09035;old_locus_tag=C9F04_09335
NZ_PYKF01000306.1	Protein Homology	CDS	2094	2639	.	+	0	ID=cds-WP_001271546.1;Parent=gene-C9F04_RS09035;Dbxref=Genbank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9F04_RS09035;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11
NZ_PYKF01000306.1	RefSeq	pseudogene	2701	3441	.	-	.	ID=gene-C9F04_RS09040;Name=C9F04_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09040;old_locus_tag=C9F04_09340;pseudo=true
NZ_PYKF01000306.1	Protein Homology	CDS	2701	3441	.	-	0	ID=cds-C9F04_RS09040;Parent=gene-C9F04_RS09040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9F04_RS09040;product=arginine ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_PYKF01000306.1	RefSeq	gene	3717	3792	.	+	.	ID=gene-C9F04_RS09045;Name=C9F04_RS09045;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS09045;old_locus_tag=C9F04_09345
NZ_PYKF01000306.1	tRNAscan-SE	tRNA	3717	3792	.	+	.	ID=rna-C9F04_RS09045;Parent=gene-C9F04_RS09045;anticodon=(pos:3750..3752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS09045;product=tRNA-Gly
NZ_PYKF01000306.1	tRNAscan-SE	exon	3717	3792	.	+	.	ID=exon-C9F04_RS09045-1;Parent=rna-C9F04_RS09045;anticodon=(pos:3750..3752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS09045;product=tRNA-Gly
NZ_PYKF01000306.1	RefSeq	pseudogene	4062	4571	.	-	.	ID=gene-C9F04_RS09050;Name=C9F04_RS09050;end_range=4571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09050;old_locus_tag=C9F04_09350;partial=true;pseudo=true
NZ_PYKF01000306.1	Protein Homology	CDS	4062	4571	.	-	0	ID=cds-C9F04_RS09050;Parent=gene-C9F04_RS09050;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9F04_RS09050;partial=true;product=tRNA epoxyqueuosine(34) reductase QueG;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000643.1 1 4564
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000643.1	RefSeq	region	1	4564	.	+	.	ID=NZ_PYKF01000643.1:1..4564;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000643.1	RefSeq	gene	46	903	.	-	.	ID=gene-C9F04_RS19735;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9F04_RS19735;old_locus_tag=C9F04_20375
NZ_PYKF01000643.1	Protein Homology	CDS	46	903	.	-	0	ID=cds-WP_146713057.1;Parent=gene-C9F04_RS19735;Dbxref=Genbank:WP_146713057.1;Name=WP_146713057.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9F04_RS19735;product=S-formylglutathione hydrolase;protein_id=WP_146713057.1;transl_table=11
NZ_PYKF01000643.1	RefSeq	gene	1233	1901	.	+	.	ID=gene-C9F04_RS19740;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9F04_RS19740;old_locus_tag=C9F04_20385
NZ_PYKF01000643.1	Protein Homology	CDS	1233	1901	.	+	0	ID=cds-WP_001139611.1;Parent=gene-C9F04_RS19740;Dbxref=Genbank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9F04_RS19740;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11
NZ_PYKF01000643.1	RefSeq	gene	1916	3058	.	+	.	ID=gene-C9F04_RS19745;Name=C9F04_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19745;old_locus_tag=C9F04_20390
NZ_PYKF01000643.1	Protein Homology	CDS	1916	3058	.	+	0	ID=cds-WP_001518079.1;Parent=gene-C9F04_RS19745;Dbxref=Genbank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9F04_RS19745;product=DUF418 family protein;protein_id=WP_001518079.1;transl_table=11
NZ_PYKF01000643.1	RefSeq	gene	3208	4230	.	+	.	ID=gene-C9F04_RS19750;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9F04_RS19750;old_locus_tag=C9F04_20395
NZ_PYKF01000643.1	Protein Homology	CDS	3208	4230	.	+	0	ID=cds-WP_146713058.1;Parent=gene-C9F04_RS19750;Dbxref=Genbank:WP_146713058.1;Name=WP_146713058.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9F04_RS19750;product=HTH-type transcriptional regulator GalS;protein_id=WP_146713058.1;transl_table=11
##sequence-region NZ_PYKF01000817.1 1 4538
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000817.1	RefSeq	region	1	4538	.	+	.	ID=NZ_PYKF01000817.1:1..4538;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000817.1	RefSeq	pseudogene	1	692	.	+	.	ID=gene-C9F04_RS25735;Name=C9F04_RS25735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25735;old_locus_tag=C9F04_26620;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000817.1	Protein Homology	CDS	1	692	.	+	2	ID=cds-C9F04_RS25735;Parent=gene-C9F04_RS25735;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9F04_RS25735;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000817.1	RefSeq	gene	853	1548	.	-	.	ID=gene-C9F04_RS25740;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F04_RS25740;old_locus_tag=C9F04_26625
NZ_PYKF01000817.1	Protein Homology	CDS	853	1548	.	-	0	ID=cds-WP_135369441.1;Parent=gene-C9F04_RS25740;Dbxref=Genbank:WP_135369441.1;Name=WP_135369441.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9F04_RS25740;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_135369441.1;transl_table=11
NZ_PYKF01000817.1	RefSeq	gene	1542	2402	.	-	.	ID=gene-C9F04_RS25745;Name=C9F04_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25745;old_locus_tag=C9F04_26630
NZ_PYKF01000817.1	Protein Homology	CDS	1542	2402	.	-	0	ID=cds-WP_146713363.1;Parent=gene-C9F04_RS25745;Dbxref=Genbank:WP_146713363.1;Name=WP_146713363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9F04_RS25745;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_146713363.1;transl_table=11
NZ_PYKF01000817.1	RefSeq	gene	2395	3057	.	-	.	ID=gene-C9F04_RS25750;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F04_RS25750;old_locus_tag=C9F04_26635
NZ_PYKF01000817.1	Protein Homology	CDS	2395	3057	.	-	0	ID=cds-WP_000089527.1;Parent=gene-C9F04_RS25750;Dbxref=Genbank:WP_000089527.1;Name=WP_000089527.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9F04_RS25750;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089527.1;transl_table=11
NZ_PYKF01000817.1	RefSeq	gene	3054	4409	.	-	.	ID=gene-C9F04_RS25755;Name=C9F04_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25755;old_locus_tag=C9F04_26640
NZ_PYKF01000817.1	Protein Homology	CDS	3054	4409	.	-	0	ID=cds-WP_146713364.1;Parent=gene-C9F04_RS25755;Dbxref=Genbank:WP_146713364.1;Name=WP_146713364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137787.1;locus_tag=C9F04_RS25755;product=carbohydrate kinase;protein_id=WP_146713364.1;transl_table=11
##sequence-region NZ_PYKF01000287.1 1 4529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000287.1	RefSeq	region	1	4529	.	+	.	ID=NZ_PYKF01000287.1:1..4529;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000287.1	RefSeq	pseudogene	1	522	.	-	.	ID=gene-C9F04_RS08340;Name=C9F04_RS08340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08340;old_locus_tag=C9F04_08615;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000287.1	Protein Homology	CDS	1	522	.	-	0	ID=cds-C9F04_RS08340;Parent=gene-C9F04_RS08340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F04_RS08340;partial=true;product=threonine synthase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000287.1	RefSeq	gene	526	1455	.	-	.	ID=gene-C9F04_RS08345;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9F04_RS08345;old_locus_tag=C9F04_08620
NZ_PYKF01000287.1	Protein Homology	CDS	526	1455	.	-	0	ID=cds-WP_000241685.1;Parent=gene-C9F04_RS08345;Dbxref=Genbank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9F04_RS08345;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11
NZ_PYKF01000287.1	RefSeq	gene	1457	3919	.	-	.	ID=gene-C9F04_RS08350;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9F04_RS08350;old_locus_tag=C9F04_08625
NZ_PYKF01000287.1	Protein Homology	CDS	1457	3919	.	-	0	ID=cds-WP_146712497.1;Parent=gene-C9F04_RS08350;Dbxref=Genbank:WP_146712497.1;Name=WP_146712497.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F04_RS08350;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_146712497.1;transl_table=11
NZ_PYKF01000287.1	cmsearch	sequence_feature	3946	4066	.	-	.	ID=id-NZ_PYKF01000287.1:3946..4066;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000287.1	RefSeq	gene	4002	4067	.	-	.	ID=gene-C9F04_RS08355;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9F04_RS08355;old_locus_tag=C9F04_08630
NZ_PYKF01000287.1	Protein Homology	CDS	4002	4067	.	-	0	ID=cds-WP_001575544.1;Parent=gene-C9F04_RS08355;Dbxref=Genbank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9F04_RS08355;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11
NZ_PYKF01000287.1	RefSeq	pseudogene	4289	4529	.	-	.	ID=gene-C9F04_RS08360;Name=C9F04_RS08360;end_range=4529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08360;old_locus_tag=C9F04_08635;partial=true;pseudo=true
NZ_PYKF01000287.1	Protein Homology	CDS	4289	4529	.	-	1	ID=cds-C9F04_RS08360;Parent=gene-C9F04_RS08360;Note=member of the SPOUT superfamily of methyltransferases%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155643.1;locus_tag=C9F04_RS08360;partial=true;product=tRNA/rRNA methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000441.1 1 4514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000441.1	RefSeq	region	1	4514	.	+	.	ID=NZ_PYKF01000441.1:1..4514;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000441.1	RefSeq	pseudogene	1	254	.	-	.	ID=gene-C9F04_RS13255;Name=C9F04_RS13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13255;old_locus_tag=C9F04_13690;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000441.1	Protein Homology	CDS	1	254	.	-	0	ID=cds-C9F04_RS13255;Parent=gene-C9F04_RS13255;Note=Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F04_RS13255;partial=true;product=acetate kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000441.1	RefSeq	gene	239	691	.	-	.	ID=gene-C9F04_RS13260;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9F04_RS13260;old_locus_tag=C9F04_13695
NZ_PYKF01000441.1	Protein Homology	CDS	239	691	.	-	0	ID=cds-WP_146712740.1;Parent=gene-C9F04_RS13260;Dbxref=Genbank:WP_146712740.1;Name=WP_146712740.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9F04_RS13260;product=propanediol utilization protein PduV;protein_id=WP_146712740.1;transl_table=11
NZ_PYKF01000441.1	RefSeq	gene	696	1046	.	-	.	ID=gene-C9F04_RS13265;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9F04_RS13265;old_locus_tag=C9F04_13700
NZ_PYKF01000441.1	Protein Homology	CDS	696	1046	.	-	0	ID=cds-WP_000441103.1;Parent=gene-C9F04_RS13265;Dbxref=Genbank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9F04_RS13265;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11
NZ_PYKF01000441.1	RefSeq	gene	1046	1600	.	-	.	ID=gene-C9F04_RS13270;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9F04_RS13270;old_locus_tag=C9F04_13705
NZ_PYKF01000441.1	Protein Homology	CDS	1046	1600	.	-	0	ID=cds-WP_000075772.1;Parent=gene-C9F04_RS13270;Dbxref=Genbank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9F04_RS13270;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11
NZ_PYKF01000441.1	RefSeq	gene	1603	2958	.	-	.	ID=gene-C9F04_RS13275;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9F04_RS13275;old_locus_tag=C9F04_13710
NZ_PYKF01000441.1	Protein Homology	CDS	1603	2958	.	-	0	ID=cds-WP_146712741.1;Parent=gene-C9F04_RS13275;Dbxref=Genbank:WP_146712741.1;Name=WP_146712741.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9F04_RS13275;product=cobalamin reductase PduS;protein_id=WP_146712741.1;transl_table=11
NZ_PYKF01000441.1	RefSeq	gene	2955	4067	.	-	.	ID=gene-C9F04_RS13280;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9F04_RS13280;old_locus_tag=C9F04_13715
NZ_PYKF01000441.1	Protein Homology	CDS	2955	4067	.	-	0	ID=cds-WP_001091455.1;Parent=gene-C9F04_RS13280;Dbxref=Genbank:WP_001091455.1;Name=WP_001091455.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9F04_RS13280;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091455.1;transl_table=11
NZ_PYKF01000441.1	RefSeq	pseudogene	4079	4514	.	-	.	ID=gene-C9F04_RS13285;Name=pduP;end_range=4514,.;gbkey=Gene;gene=pduP;gene_biotype=pseudogene;locus_tag=C9F04_RS13285;old_locus_tag=C9F04_13720;partial=true;pseudo=true
NZ_PYKF01000441.1	Protein Homology	CDS	4079	4514	.	-	1	ID=cds-C9F04_RS13285;Parent=gene-C9F04_RS13285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4514,.;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9F04_RS13285;partial=true;product=CoA-acylating propionaldehyde dehydrogenase PduP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000680.1 1 4501
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000680.1	RefSeq	region	1	4501	.	+	.	ID=NZ_PYKF01000680.1:1..4501;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000680.1	RefSeq	gene	1	177	.	-	.	ID=gene-C9F04_RS20960;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9F04_RS20960;old_locus_tag=C9F04_21630;partial=true;start_range=.,1
NZ_PYKF01000680.1	Protein Homology	CDS	1	177	.	-	0	ID=cds-WP_049590163.1;Parent=gene-C9F04_RS20960;Dbxref=Genbank:WP_049590163.1;Name=WP_049590163.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=C9F04_RS20960;partial=true;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_049590163.1;start_range=.,1;transl_table=11
NZ_PYKF01000680.1	RefSeq	gene	365	937	.	-	.	ID=gene-C9F04_RS20965;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9F04_RS20965;old_locus_tag=C9F04_21635
NZ_PYKF01000680.1	Protein Homology	CDS	365	937	.	-	0	ID=cds-WP_001623090.1;Parent=gene-C9F04_RS20965;Dbxref=Genbank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9F04_RS20965;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11
NZ_PYKF01000680.1	RefSeq	gene	1316	2701	.	+	.	ID=gene-C9F04_RS20970;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9F04_RS20970;old_locus_tag=C9F04_21645
NZ_PYKF01000680.1	Protein Homology	CDS	1316	2701	.	+	0	ID=cds-WP_146713115.1;Parent=gene-C9F04_RS20970;Dbxref=Genbank:WP_146713115.1;Name=WP_146713115.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=C9F04_RS20970;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_146713115.1;transl_table=11
NZ_PYKF01000680.1	RefSeq	gene	2755	3435	.	-	.	ID=gene-C9F04_RS20975;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F04_RS20975;old_locus_tag=C9F04_21650
NZ_PYKF01000680.1	Protein Homology	CDS	2755	3435	.	-	0	ID=cds-WP_000138788.1;Parent=gene-C9F04_RS20975;Dbxref=Genbank:WP_000138788.1;Name=WP_000138788.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9F04_RS20975;product=two-component response regulator DpiA;protein_id=WP_000138788.1;transl_table=11
NZ_PYKF01000680.1	RefSeq	gene	3404	4501	.	-	.	ID=gene-C9F04_RS20980;Name=dpiB;end_range=4501,.;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9F04_RS20980;old_locus_tag=C9F04_21655;partial=true
NZ_PYKF01000680.1	Protein Homology	CDS	3404	4501	.	-	0	ID=cds-WP_146713116.1;Parent=gene-C9F04_RS20980;Dbxref=Genbank:WP_146713116.1;Name=WP_146713116.1;Ontology_term=GO:0000160,GO:0000155;end_range=4501,.;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9F04_RS20980;partial=true;product=sensor histidine kinase DpiB;protein_id=WP_146713116.1;transl_table=11
##sequence-region NZ_PYKF01000428.1 1 4496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000428.1	RefSeq	region	1	4496	.	+	.	ID=NZ_PYKF01000428.1:1..4496;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000428.1	RefSeq	pseudogene	1	669	.	+	.	ID=gene-C9F04_RS12860;Name=C9F04_RS12860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12860;old_locus_tag=C9F04_13285;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000428.1	Protein Homology	CDS	1	669	.	+	0	ID=cds-C9F04_RS12860;Parent=gene-C9F04_RS12860;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F04_RS12860;partial=true;product=transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000428.1	RefSeq	gene	1113	1460	.	+	.	ID=gene-C9F04_RS12865;Name=C9F04_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12865;old_locus_tag=C9F04_13290
NZ_PYKF01000428.1	Protein Homology	CDS	1113	1460	.	+	0	ID=cds-WP_146712722.1;Parent=gene-C9F04_RS12865;Dbxref=Genbank:WP_146712722.1;Name=WP_146712722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9F04_RS12865;product=YidH family protein;protein_id=WP_146712722.1;transl_table=11
NZ_PYKF01000428.1	RefSeq	gene	1450	1812	.	+	.	ID=gene-C9F04_RS12870;Name=C9F04_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12870;old_locus_tag=C9F04_13295
NZ_PYKF01000428.1	Protein Homology	CDS	1450	1812	.	+	0	ID=cds-WP_001113454.1;Parent=gene-C9F04_RS12870;Dbxref=Genbank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9F04_RS12870;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11
NZ_PYKF01000428.1	RefSeq	gene	1809	2339	.	+	.	ID=gene-C9F04_RS12875;Name=C9F04_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12875;old_locus_tag=C9F04_13300
NZ_PYKF01000428.1	Protein Homology	CDS	1809	2339	.	+	0	ID=cds-WP_000147833.1;Parent=gene-C9F04_RS12875;Dbxref=Genbank:WP_000147833.1;Name=WP_000147833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9F04_RS12875;product=radical SAM protein;protein_id=WP_000147833.1;transl_table=11
NZ_PYKF01000428.1	RefSeq	gene	2421	3743	.	-	.	ID=gene-C9F04_RS12880;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9F04_RS12880;old_locus_tag=C9F04_13305
NZ_PYKF01000428.1	Protein Homology	CDS	2421	3743	.	-	0	ID=cds-WP_020837877.1;Parent=gene-C9F04_RS12880;Dbxref=Genbank:WP_020837877.1;Name=WP_020837877.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9F04_RS12880;product=D-serine ammonia-lyase;protein_id=WP_020837877.1;transl_table=11
NZ_PYKF01000428.1	RefSeq	pseudogene	3761	4453	.	-	.	ID=gene-C9F04_RS12885;Name=C9F04_RS12885;end_range=4453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12885;old_locus_tag=C9F04_13310;partial=true;pseudo=true
NZ_PYKF01000428.1	Protein Homology	CDS	3761	4453	.	-	0	ID=cds-C9F04_RS12885;Parent=gene-C9F04_RS12885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9F04_RS12885;partial=true;product=D-serine transporter DsdX;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000211.1 1 18457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000211.1	RefSeq	region	1	18457	.	+	.	ID=NZ_PYKF01000211.1:1..18457;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000211.1	RefSeq	pseudogene	75	734	.	-	.	ID=gene-C9F04_RS05165;Name=C9F04_RS05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05165;old_locus_tag=C9F04_05335;partial=true;pseudo=true;start_range=.,75
NZ_PYKF01000211.1	Protein Homology	CDS	75	734	.	-	0	ID=cds-C9F04_RS05165;Parent=gene-C9F04_RS05165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004138273.1;locus_tag=C9F04_RS05165;partial=true;product=MFS transporter;pseudo=true;start_range=.,75;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	870	1628	.	-	.	ID=gene-C9F04_RS05170;Name=C9F04_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05170;old_locus_tag=C9F04_05340
NZ_PYKF01000211.1	Protein Homology	CDS	870	1628	.	-	0	ID=cds-WP_079902888.1;Parent=gene-C9F04_RS05170;Dbxref=Genbank:WP_079902888.1;Name=WP_079902888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=C9F04_RS05170;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_079902888.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	1758	2741	.	-	.	ID=gene-C9F04_RS05175;Name=C9F04_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05175;old_locus_tag=C9F04_05345
NZ_PYKF01000211.1	Protein Homology	CDS	1758	2741	.	-	0	ID=cds-WP_146712376.1;Parent=gene-C9F04_RS05175;Dbxref=Genbank:WP_146712376.1;Name=WP_146712376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9F04_RS05175;product=aldo/keto reductase;protein_id=WP_146712376.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	2751	3698	.	-	.	ID=gene-C9F04_RS05180;Name=C9F04_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05180;old_locus_tag=C9F04_05350
NZ_PYKF01000211.1	Protein Homology	CDS	2751	3698	.	-	0	ID=cds-WP_000343332.1;Parent=gene-C9F04_RS05180;Dbxref=Genbank:WP_000343332.1;Name=WP_000343332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=C9F04_RS05180;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	3703	4539	.	-	.	ID=gene-C9F04_RS05185;Name=C9F04_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05185;old_locus_tag=C9F04_05355
NZ_PYKF01000211.1	Protein Homology	CDS	3703	4539	.	-	0	ID=cds-WP_000878867.1;Parent=gene-C9F04_RS05185;Dbxref=Genbank:WP_000878867.1;Name=WP_000878867.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9F04_RS05185;product=ketose-bisphosphate aldolase;protein_id=WP_000878867.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	4561	5565	.	-	.	ID=gene-C9F04_RS05190;Name=C9F04_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05190;old_locus_tag=C9F04_05360
NZ_PYKF01000211.1	Protein Homology	CDS	4561	5565	.	-	0	ID=cds-WP_146712377.1;Parent=gene-C9F04_RS05190;Dbxref=Genbank:WP_146712377.1;Name=WP_146712377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9F04_RS05190;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_146712377.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	5615	6994	.	-	.	ID=gene-C9F04_RS05195;Name=C9F04_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05195;old_locus_tag=C9F04_05365
NZ_PYKF01000211.1	Protein Homology	CDS	5615	6994	.	-	0	ID=cds-WP_146712378.1;Parent=gene-C9F04_RS05195;Dbxref=Genbank:WP_146712378.1;Name=WP_146712378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F04_RS05195;product=MFS transporter;protein_id=WP_146712378.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	7021	8097	.	-	.	ID=gene-C9F04_RS05200;Name=C9F04_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05200;old_locus_tag=C9F04_05370
NZ_PYKF01000211.1	Protein Homology	CDS	7021	8097	.	-	0	ID=cds-WP_146712379.1;Parent=gene-C9F04_RS05200;Dbxref=Genbank:WP_146712379.1;Name=WP_146712379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F04_RS05200;product=zinc-binding dehydrogenase;protein_id=WP_146712379.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	pseudogene	8390	8823	.	+	.	ID=gene-C9F04_RS26920;Name=C9F04_RS26920;end_range=8823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26920;partial=true;pseudo=true;start_range=.,8390
NZ_PYKF01000211.1	Protein Homology	CDS	8390	8823	.	+	0	ID=cds-C9F04_RS26920;Parent=gene-C9F04_RS26920;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;end_range=8823,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121123.1;locus_tag=C9F04_RS26920;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,8390;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	8999	9277	.	-	.	ID=gene-C9F04_RS05205;Name=C9F04_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05205;old_locus_tag=C9F04_05375
NZ_PYKF01000211.1	Protein Homology	CDS	8999	9277	.	-	0	ID=cds-WP_146712380.1;Parent=gene-C9F04_RS05205;Dbxref=Genbank:WP_146712380.1;Name=WP_146712380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9F04_RS05205;product=YeaC family protein;protein_id=WP_146712380.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	9319	9732	.	-	.	ID=gene-C9F04_RS05210;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9F04_RS05210;old_locus_tag=C9F04_05380
NZ_PYKF01000211.1	Protein Homology	CDS	9319	9732	.	-	0	ID=cds-WP_001519539.1;Parent=gene-C9F04_RS05210;Dbxref=Genbank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9F04_RS05210;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	10074	11069	.	+	.	ID=gene-C9F04_RS05215;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9F04_RS05215;old_locus_tag=C9F04_05385
NZ_PYKF01000211.1	Protein Homology	CDS	10074	11069	.	+	0	ID=cds-WP_000153505.1;Parent=gene-C9F04_RS05215;Dbxref=Genbank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9F04_RS05215;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	11404	12288	.	+	.	ID=gene-C9F04_RS05220;Name=C9F04_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05220;old_locus_tag=C9F04_05395
NZ_PYKF01000211.1	Protein Homology	CDS	11404	12288	.	+	0	ID=cds-WP_000608662.1;Parent=gene-C9F04_RS05220;Dbxref=Genbank:WP_000608662.1;Name=WP_000608662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F04_RS05220;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608662.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	12387	13244	.	-	.	ID=gene-C9F04_RS05225;Name=C9F04_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05225;old_locus_tag=C9F04_05400
NZ_PYKF01000211.1	Protein Homology	CDS	12387	13244	.	-	0	ID=cds-WP_000843751.1;Parent=gene-C9F04_RS05225;Dbxref=Genbank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9F04_RS05225;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	13341	14537	.	-	.	ID=gene-C9F04_RS05230;Name=C9F04_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05230;old_locus_tag=C9F04_05405
NZ_PYKF01000211.1	Protein Homology	CDS	13341	14537	.	-	0	ID=cds-WP_079802047.1;Parent=gene-C9F04_RS05230;Dbxref=Genbank:WP_079802047.1;Name=WP_079802047.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9F04_RS05230;product=anaerobic sulfatase maturase;protein_id=WP_079802047.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	14827	15573	.	-	.	ID=gene-C9F04_RS05235;Name=C9F04_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05235;old_locus_tag=C9F04_05410
NZ_PYKF01000211.1	Protein Homology	CDS	14827	15573	.	-	0	ID=cds-WP_000163762.1;Parent=gene-C9F04_RS05235;Dbxref=Genbank:WP_000163762.1;Name=WP_000163762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9F04_RS05235;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	15999	17933	.	+	.	ID=gene-C9F04_RS05240;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9F04_RS05240;old_locus_tag=C9F04_05415
NZ_PYKF01000211.1	Protein Homology	CDS	15999	17933	.	+	0	ID=cds-WP_146712381.1;Parent=gene-C9F04_RS05240;Dbxref=Genbank:WP_146712381.1;Name=WP_146712381.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=C9F04_RS05240;product=protein kinase YeaG;protein_id=WP_146712381.1;transl_table=11
NZ_PYKF01000211.1	RefSeq	gene	18056	18430	.	+	.	ID=gene-C9F04_RS05245;Name=C9F04_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05245;old_locus_tag=C9F04_05420
NZ_PYKF01000211.1	Protein Homology	CDS	18056	18430	.	+	0	ID=cds-WP_261770747.1;Parent=gene-C9F04_RS05245;Dbxref=Genbank:WP_261770747.1;Name=WP_261770747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F04_RS05245;product=DUF444 family protein;protein_id=WP_261770747.1;transl_table=11
##sequence-region NZ_PYKF01000073.1 1 4485
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000073.1	RefSeq	region	1	4485	.	+	.	ID=NZ_PYKF01000073.1:1..4485;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000073.1	RefSeq	gene	1	594	.	-	.	ID=gene-C9F04_RS01420;Name=C9F04_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01420;old_locus_tag=C9F04_01490;partial=true;start_range=.,1
NZ_PYKF01000073.1	Protein Homology	CDS	1	594	.	-	0	ID=cds-WP_146712189.1;Parent=gene-C9F04_RS01420;Dbxref=Genbank:WP_146712189.1;Name=WP_146712189.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9F04_RS01420;partial=true;product=acyltransferase family protein;protein_id=WP_146712189.1;start_range=.,1;transl_table=11
NZ_PYKF01000073.1	RefSeq	gene	866	2401	.	+	.	ID=gene-C9F04_RS01425;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9F04_RS01425;old_locus_tag=C9F04_01495
NZ_PYKF01000073.1	Protein Homology	CDS	866	2401	.	+	0	ID=cds-WP_146712190.1;Parent=gene-C9F04_RS01425;Dbxref=Genbank:WP_146712190.1;Name=WP_146712190.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9F04_RS01425;product=glucans biosynthesis protein MdoG;protein_id=WP_146712190.1;transl_table=11
NZ_PYKF01000073.1	RefSeq	pseudogene	2394	4424	.	+	.	ID=gene-C9F04_RS01430;Name=mdoH;end_range=4424,.;gbkey=Gene;gene=mdoH;gene_biotype=pseudogene;locus_tag=C9F04_RS01430;old_locus_tag=C9F04_01500;partial=true;pseudo=true
NZ_PYKF01000073.1	Protein Homology	CDS	2394	4424	.	+	0	ID=cds-C9F04_RS01430;Parent=gene-C9F04_RS01430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016758;end_range=4424,.;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F04_RS01430;partial=true;product=glucans biosynthesis glucosyltransferase MdoH;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000506.1 1 4468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000506.1	RefSeq	region	1	4468	.	+	.	ID=NZ_PYKF01000506.1:1..4468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000506.1	RefSeq	gene	1	700	.	+	.	ID=gene-C9F04_RS15130;Name=C9F04_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15130;old_locus_tag=C9F04_15615;partial=true;start_range=.,1
NZ_PYKF01000506.1	Protein Homology	CDS	1	700	.	+	1	ID=cds-WP_146712821.1;Parent=gene-C9F04_RS15130;Dbxref=Genbank:WP_146712821.1;Name=WP_146712821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F04_RS15130;partial=true;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_146712821.1;start_range=.,1;transl_table=11
NZ_PYKF01000506.1	RefSeq	gene	1309	1752	.	+	.	ID=gene-C9F04_RS27080;Name=C9F04_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27080
NZ_PYKF01000506.1	Protein Homology	CDS	1309	1752	.	+	0	ID=cds-WP_261771231.1;Parent=gene-C9F04_RS27080;Dbxref=Genbank:WP_261771231.1;Name=WP_261771231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.2;locus_tag=C9F04_RS27080;product=ESPR domain-containing protein;protein_id=WP_261771231.1;transl_table=11
NZ_PYKF01000506.1	RefSeq	gene	1765	4468	.	+	.	ID=gene-C9F04_RS15135;Name=C9F04_RS15135;end_range=4468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15135;old_locus_tag=C9F04_15620;partial=true
NZ_PYKF01000506.1	Protein Homology	CDS	1765	4468	.	+	0	ID=cds-WP_261771233.1;Parent=gene-C9F04_RS15135;Dbxref=Genbank:WP_261771233.1;Name=WP_261771233.1;end_range=4468,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02601.1;locus_tag=C9F04_RS15135;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_261771233.1;transl_table=11
##sequence-region NZ_PYKF01000786.1 1 4466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000786.1	RefSeq	region	1	4466	.	+	.	ID=NZ_PYKF01000786.1:1..4466;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000786.1	RefSeq	gene	1	942	.	-	.	ID=gene-C9F04_RS24560;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9F04_RS24560;old_locus_tag=C9F04_25395;partial=true;start_range=.,1
NZ_PYKF01000786.1	Protein Homology	CDS	1	942	.	-	0	ID=cds-WP_146713305.1;Parent=gene-C9F04_RS24560;Dbxref=Genbank:WP_146713305.1;Name=WP_146713305.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=baeS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906413.1;locus_tag=C9F04_RS24560;partial=true;product=two-component system sensor histidine kinase BaeS;protein_id=WP_146713305.1;start_range=.,1;transl_table=11
NZ_PYKF01000786.1	RefSeq	gene	942	2354	.	-	.	ID=gene-C9F04_RS24565;Name=C9F04_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24565;old_locus_tag=C9F04_25400
NZ_PYKF01000786.1	Protein Homology	CDS	942	2354	.	-	0	ID=cds-WP_146713306.1;Parent=gene-C9F04_RS24565;Dbxref=Genbank:WP_146713306.1;Name=WP_146713306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9F04_RS24565;product=MFS transporter;protein_id=WP_146713306.1;transl_table=11
NZ_PYKF01000786.1	RefSeq	gene	2351	4466	.	-	.	ID=gene-C9F04_RS24570;Name=mdtC;end_range=4466,.;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9F04_RS24570;old_locus_tag=C9F04_25405;partial=true
NZ_PYKF01000786.1	Protein Homology	CDS	2351	4466	.	-	1	ID=cds-WP_261771501.1;Parent=gene-C9F04_RS24570;Dbxref=Genbank:WP_261771501.1;Name=WP_261771501.1;end_range=4466,.;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F04_RS24570;partial=true;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_261771501.1;transl_table=11
##sequence-region NZ_PYKF01000541.1 1 4450
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000541.1	RefSeq	region	1	4450	.	+	.	ID=NZ_PYKF01000541.1:1..4450;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000541.1	RefSeq	gene	3	1487	.	-	.	ID=gene-C9F04_RS16215;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9F04_RS16215;old_locus_tag=C9F04_16715
NZ_PYKF01000541.1	Protein Homology	CDS	3	1487	.	-	0	ID=cds-WP_146712879.1;Parent=gene-C9F04_RS16215;Dbxref=Genbank:WP_146712879.1;Name=WP_146712879.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9F04_RS16215;product=alpha-amylase;protein_id=WP_146712879.1;transl_table=11
NZ_PYKF01000541.1	RefSeq	gene	1559	1927	.	-	.	ID=gene-C9F04_RS16220;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9F04_RS16220;old_locus_tag=C9F04_16720
NZ_PYKF01000541.1	Protein Homology	CDS	1559	1927	.	-	0	ID=cds-WP_000204899.1;Parent=gene-C9F04_RS16220;Dbxref=Genbank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9F04_RS16220;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11
NZ_PYKF01000541.1	RefSeq	gene	1927	2334	.	-	.	ID=gene-C9F04_RS16225;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9F04_RS16225;old_locus_tag=C9F04_16725
NZ_PYKF01000541.1	Protein Homology	CDS	1927	2334	.	-	0	ID=cds-WP_146712880.1;Parent=gene-C9F04_RS16225;Dbxref=Genbank:WP_146712880.1;Name=WP_146712880.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9F04_RS16225;product=flagellar export chaperone FliS;protein_id=WP_146712880.1;transl_table=11
NZ_PYKF01000541.1	RefSeq	gene	2349	3752	.	-	.	ID=gene-C9F04_RS16230;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9F04_RS16230;old_locus_tag=C9F04_16730
NZ_PYKF01000541.1	Protein Homology	CDS	2349	3752	.	-	0	ID=cds-WP_031605229.1;Parent=gene-C9F04_RS16230;Dbxref=Genbank:WP_031605229.1;Name=WP_031605229.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9F04_RS16230;product=flagellar filament capping protein FliD;protein_id=WP_031605229.1;transl_table=11
NZ_PYKF01000541.1	RefSeq	gene	3769	3990	.	+	.	ID=gene-C9F04_RS16235;Name=C9F04_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16235;old_locus_tag=C9F04_16735
NZ_PYKF01000541.1	GeneMarkS-2+	CDS	3769	3990	.	+	0	ID=cds-WP_023234688.1;Parent=gene-C9F04_RS16235;Dbxref=Genbank:WP_023234688.1;Name=WP_023234688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS16235;product=hypothetical protein;protein_id=WP_023234688.1;transl_table=11
NZ_PYKF01000541.1	RefSeq	pseudogene	4008	4450	.	+	.	ID=gene-C9F04_RS16240;Name=C9F04_RS16240;end_range=4450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16240;old_locus_tag=C9F04_16740;partial=true;pseudo=true
NZ_PYKF01000541.1	Protein Homology	CDS	4008	4450	.	+	0	ID=cds-C9F04_RS16240;Parent=gene-C9F04_RS16240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=C9F04_RS16240;partial=true;product=flagellin FliC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000589.1 1 4407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000589.1	RefSeq	region	1	4407	.	+	.	ID=NZ_PYKF01000589.1:1..4407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000589.1	RefSeq	gene	1	798	.	+	.	ID=gene-C9F04_RS17545;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9F04_RS17545;old_locus_tag=C9F04_18105;partial=true;start_range=.,1
NZ_PYKF01000589.1	Protein Homology	CDS	1	798	.	+	0	ID=cds-WP_146712952.1;Parent=gene-C9F04_RS17545;Dbxref=Genbank:WP_146712952.1;Name=WP_146712952.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F04_RS17545;partial=true;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_146712952.1;start_range=.,1;transl_table=11
NZ_PYKF01000589.1	RefSeq	gene	813	1355	.	+	.	ID=gene-C9F04_RS17550;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9F04_RS17550;old_locus_tag=C9F04_18110
NZ_PYKF01000589.1	Protein Homology	CDS	813	1355	.	+	0	ID=cds-WP_000172747.1;Parent=gene-C9F04_RS17550;Dbxref=Genbank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9F04_RS17550;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11
NZ_PYKF01000589.1	RefSeq	gene	1366	1920	.	+	.	ID=gene-C9F04_RS17555;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9F04_RS17555;old_locus_tag=C9F04_18115
NZ_PYKF01000589.1	Protein Homology	CDS	1366	1920	.	+	0	ID=cds-WP_146712953.1;Parent=gene-C9F04_RS17555;Dbxref=Genbank:WP_146712953.1;Name=WP_146712953.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9F04_RS17555;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_146712953.1;transl_table=11
NZ_PYKF01000589.1	RefSeq	gene	1917	2219	.	+	.	ID=gene-C9F04_RS17560;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9F04_RS17560;old_locus_tag=C9F04_18120
NZ_PYKF01000589.1	Protein Homology	CDS	1917	2219	.	+	0	ID=cds-WP_000612687.1;Parent=gene-C9F04_RS17560;Dbxref=Genbank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9F04_RS17560;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11
NZ_PYKF01000589.1	RefSeq	gene	2216	4057	.	+	.	ID=gene-C9F04_RS17565;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9F04_RS17565;old_locus_tag=C9F04_18125
NZ_PYKF01000589.1	Protein Homology	CDS	2216	4057	.	+	0	ID=cds-WP_146712954.1;Parent=gene-C9F04_RS17565;Dbxref=Genbank:WP_146712954.1;Name=WP_146712954.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9F04_RS17565;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_146712954.1;transl_table=11
NZ_PYKF01000589.1	RefSeq	pseudogene	4134	4407	.	+	.	ID=gene-C9F04_RS17570;Name=C9F04_RS17570;end_range=4407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17570;old_locus_tag=C9F04_18130;partial=true;pseudo=true
NZ_PYKF01000589.1	Protein Homology	CDS	4134	4407	.	+	0	ID=cds-C9F04_RS17570;Parent=gene-C9F04_RS17570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F04_RS17570;partial=true;product=NADH-quinone oxidoreductase subunit M;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000816.1 1 4399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000816.1	RefSeq	region	1	4399	.	+	.	ID=NZ_PYKF01000816.1:1..4399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000816.1	RefSeq	gene	1	739	.	-	.	ID=gene-C9F04_RS25710;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9F04_RS25710;old_locus_tag=C9F04_26595;partial=true;start_range=.,1
NZ_PYKF01000816.1	Protein Homology	CDS	1	739	.	-	0	ID=cds-WP_261771511.1;Parent=gene-C9F04_RS25710;Dbxref=Genbank:WP_261771511.1;Name=WP_261771511.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9F04_RS25710;partial=true;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_261771511.1;start_range=.,1;transl_table=11
NZ_PYKF01000816.1	RefSeq	gene	1029	1598	.	-	.	ID=gene-C9F04_RS25715;Name=C9F04_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25715;old_locus_tag=C9F04_26600
NZ_PYKF01000816.1	Protein Homology	CDS	1029	1598	.	-	0	ID=cds-WP_050067770.1;Parent=gene-C9F04_RS25715;Dbxref=Genbank:WP_050067770.1;Name=WP_050067770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9F04_RS25715;product=UbiX family flavin prenyltransferase;protein_id=WP_050067770.1;transl_table=11
NZ_PYKF01000816.1	RefSeq	gene	1625	3031	.	-	.	ID=gene-C9F04_RS25720;Name=C9F04_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25720;old_locus_tag=C9F04_26605
NZ_PYKF01000816.1	Protein Homology	CDS	1625	3031	.	-	0	ID=cds-WP_000380356.1;Parent=gene-C9F04_RS25720;Dbxref=Genbank:WP_000380356.1;Name=WP_000380356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9F04_RS25720;product=amino acid permease;protein_id=WP_000380356.1;transl_table=11
NZ_PYKF01000816.1	RefSeq	gene	3095	4198	.	-	.	ID=gene-C9F04_RS25725;Name=C9F04_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25725;old_locus_tag=C9F04_26610
NZ_PYKF01000816.1	Protein Homology	CDS	3095	4198	.	-	0	ID=cds-WP_000281907.1;Parent=gene-C9F04_RS25725;Dbxref=Genbank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9F04_RS25725;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11
NZ_PYKF01000816.1	RefSeq	pseudogene	4200	4399	.	-	.	ID=gene-C9F04_RS25730;Name=C9F04_RS25730;end_range=4399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25730;old_locus_tag=C9F04_26615;partial=true;pseudo=true
NZ_PYKF01000816.1	Protein Homology	CDS	4200	4399	.	-	2	ID=cds-C9F04_RS25730;Parent=gene-C9F04_RS25730;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9F04_RS25730;partial=true;product=amino acid transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000259.1 1 4395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000259.1	RefSeq	region	1	4395	.	+	.	ID=NZ_PYKF01000259.1:1..4395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000259.1	RefSeq	pseudogene	1	358	.	-	.	ID=gene-C9F04_RS07270;Name=C9F04_RS07270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07270;old_locus_tag=C9F04_07505;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000259.1	Protein Homology	CDS	1	358	.	-	0	ID=cds-C9F04_RS07270;Parent=gene-C9F04_RS07270;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9F04_RS07270;partial=true;product=miniconductance mechanosensitive channel;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000259.1	RefSeq	gene	669	2639	.	+	.	ID=gene-C9F04_RS07275;Name=C9F04_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07275;old_locus_tag=C9F04_07515
NZ_PYKF01000259.1	Protein Homology	CDS	669	2639	.	+	0	ID=cds-WP_146712465.1;Parent=gene-C9F04_RS07275;Dbxref=Genbank:WP_146712465.1;Name=WP_146712465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F04_RS07275;product=autotransporter domain-containing protein;protein_id=WP_146712465.1;transl_table=11
NZ_PYKF01000259.1	RefSeq	gene	2806	4395	.	+	.	ID=gene-C9F04_RS07280;Name=C9F04_RS07280;end_range=4395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07280;old_locus_tag=C9F04_07520;partial=true
NZ_PYKF01000259.1	Protein Homology	CDS	2806	4395	.	+	0	ID=cds-WP_146712466.1;Parent=gene-C9F04_RS07280;Dbxref=Genbank:WP_146712466.1;Name=WP_146712466.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;end_range=4395,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9F04_RS07280;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=WP_146712466.1;transl_table=11
##sequence-region NZ_PYKF01000796.1 1 4392
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000796.1	RefSeq	region	1	4392	.	+	.	ID=NZ_PYKF01000796.1:1..4392;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000796.1	RefSeq	gene	160	849	.	-	.	ID=gene-C9F04_RS24795;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9F04_RS24795;old_locus_tag=C9F04_25645
NZ_PYKF01000796.1	Protein Homology	CDS	160	849	.	-	0	ID=cds-WP_000179978.1;Parent=gene-C9F04_RS24795;Dbxref=Genbank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9F04_RS24795;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11
NZ_PYKF01000796.1	RefSeq	gene	1168	1551	.	+	.	ID=gene-C9F04_RS24800;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9F04_RS24800;old_locus_tag=C9F04_25650
NZ_PYKF01000796.1	Protein Homology	CDS	1168	1551	.	+	0	ID=cds-WP_000627811.1;Parent=gene-C9F04_RS24800;Dbxref=Genbank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9F04_RS24800;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11
NZ_PYKF01000796.1	RefSeq	gene	1613	2200	.	-	.	ID=gene-C9F04_RS24805;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9F04_RS24805;old_locus_tag=C9F04_25655
NZ_PYKF01000796.1	Protein Homology	CDS	1613	2200	.	-	0	ID=cds-WP_000188410.1;Parent=gene-C9F04_RS24805;Dbxref=Genbank:WP_000188410.1;Name=WP_000188410.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9F04_RS24805;product=cysteine/O-acetylserine transporter;protein_id=WP_000188410.1;transl_table=11
NZ_PYKF01000796.1	RefSeq	gene	2303	3202	.	+	.	ID=gene-C9F04_RS24810;Name=C9F04_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24810;old_locus_tag=C9F04_25660
NZ_PYKF01000796.1	Protein Homology	CDS	2303	3202	.	+	0	ID=cds-WP_001670786.1;Parent=gene-C9F04_RS24810;Dbxref=Genbank:WP_001670786.1;Name=WP_001670786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9F04_RS24810;product=LysR family transcriptional regulator;protein_id=WP_001670786.1;transl_table=11
NZ_PYKF01000796.1	RefSeq	gene	3220	4392	.	-	.	ID=gene-C9F04_RS24815;Name=srmB;end_range=4392,.;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9F04_RS24815;old_locus_tag=C9F04_25665;partial=true
NZ_PYKF01000796.1	Protein Homology	CDS	3220	4392	.	-	0	ID=cds-WP_146713323.1;Parent=gene-C9F04_RS24815;Dbxref=Genbank:WP_146713323.1;Name=WP_146713323.1;Ontology_term=GO:0000027,GO:0003724;end_range=4392,.;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9F04_RS24815;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=WP_146713323.1;transl_table=11
##sequence-region NZ_PYKF01000455.1 1 4390
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000455.1	RefSeq	region	1	4390	.	+	.	ID=NZ_PYKF01000455.1:1..4390;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000455.1	RefSeq	pseudogene	1	262	.	+	.	ID=gene-C9F04_RS13705;Name=C9F04_RS13705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13705;old_locus_tag=C9F04_14150;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000455.1	Protein Homology	CDS	1	262	.	+	1	ID=cds-C9F04_RS13705;Parent=gene-C9F04_RS13705;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9F04_RS13705;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000455.1	RefSeq	gene	303	650	.	+	.	ID=gene-C9F04_RS13710;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9F04_RS13710;old_locus_tag=C9F04_14155
NZ_PYKF01000455.1	Protein Homology	CDS	303	650	.	+	0	ID=cds-WP_000065257.1;Parent=gene-C9F04_RS13710;Dbxref=Genbank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9F04_RS13710;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11
NZ_PYKF01000455.1	RefSeq	gene	807	2027	.	-	.	ID=gene-C9F04_RS13715;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9F04_RS13715;old_locus_tag=C9F04_14160
NZ_PYKF01000455.1	Protein Homology	CDS	807	2027	.	-	0	ID=cds-WP_001030985.1;Parent=gene-C9F04_RS13715;Dbxref=Genbank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016021;gbkey=CDS;gene=dgcN;go_component=integral component of membrane|0016021||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9F04_RS13715;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11
NZ_PYKF01000455.1	RefSeq	gene	2020	2538	.	-	.	ID=gene-C9F04_RS13720;Name=C9F04_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13720;old_locus_tag=C9F04_14165
NZ_PYKF01000455.1	Protein Homology	CDS	2020	2538	.	-	0	ID=cds-WP_001212379.1;Parent=gene-C9F04_RS13720;Dbxref=Genbank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9F04_RS13720;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11
NZ_PYKF01000455.1	RefSeq	gene	2978	4048	.	+	.	ID=gene-C9F04_RS13725;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9F04_RS13725;old_locus_tag=C9F04_14170
NZ_PYKF01000455.1	Protein Homology	CDS	2978	4048	.	+	0	ID=cds-WP_135369223.1;Parent=gene-C9F04_RS13725;Dbxref=Genbank:WP_135369223.1;Name=WP_135369223.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9F04_RS13725;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_135369223.1;transl_table=11
NZ_PYKF01000455.1	RefSeq	gene	4058	4390	.	+	.	ID=gene-C9F04_RS13730;Name=tyrA;end_range=4390,.;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9F04_RS13730;old_locus_tag=C9F04_14175;partial=true
NZ_PYKF01000455.1	Protein Homology	CDS	4058	4390	.	+	0	ID=cds-WP_146712767.1;Parent=gene-C9F04_RS13730;Dbxref=Genbank:WP_146712767.1;Name=WP_146712767.1;Ontology_term=GO:0009095,GO:0004106;end_range=4390,.;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA;go_process=aromatic amino acid family biosynthetic process%2C prephenate pathway|0009095||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9F04_RS13730;partial=true;product=chorismate mutase;protein_id=WP_146712767.1;transl_table=11
##sequence-region NZ_PYKF01000393.1 1 4374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000393.1	RefSeq	region	1	4374	.	+	.	ID=NZ_PYKF01000393.1:1..4374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000393.1	RefSeq	gene	1	642	.	-	.	ID=gene-C9F04_RS11535;Name=C9F04_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11535;old_locus_tag=C9F04_11925;partial=true;start_range=.,1
NZ_PYKF01000393.1	Protein Homology	CDS	1	642	.	-	0	ID=cds-WP_146712656.1;Parent=gene-C9F04_RS11535;Dbxref=Genbank:WP_146712656.1;Name=WP_146712656.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9F04_RS11535;partial=true;product=MFS transporter;protein_id=WP_146712656.1;start_range=.,1;transl_table=11
NZ_PYKF01000393.1	RefSeq	gene	857	1435	.	-	.	ID=gene-C9F04_RS11540;Name=C9F04_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11540;old_locus_tag=C9F04_11930
NZ_PYKF01000393.1	Protein Homology	CDS	857	1435	.	-	0	ID=cds-WP_000121037.1;Parent=gene-C9F04_RS11540;Dbxref=Genbank:WP_000121037.1;Name=WP_000121037.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9F04_RS11540;product=TetR family transcriptional regulator;protein_id=WP_000121037.1;transl_table=11
NZ_PYKF01000393.1	RefSeq	gene	1553	3040	.	+	.	ID=gene-C9F04_RS11545;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9F04_RS11545;old_locus_tag=C9F04_11935
NZ_PYKF01000393.1	Protein Homology	CDS	1553	3040	.	+	0	ID=cds-WP_000489740.1;Parent=gene-C9F04_RS11545;Dbxref=Genbank:WP_000489740.1;Name=WP_000489740.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9F04_RS11545;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489740.1;transl_table=11
NZ_PYKF01000393.1	RefSeq	gene	3065	3445	.	-	.	ID=gene-C9F04_RS11550;Name=C9F04_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11550;old_locus_tag=C9F04_11940
NZ_PYKF01000393.1	Protein Homology	CDS	3065	3445	.	-	0	ID=cds-WP_014343841.1;Parent=gene-C9F04_RS11550;Dbxref=Genbank:WP_014343841.1;Name=WP_014343841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9F04_RS11550;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11
NZ_PYKF01000393.1	RefSeq	gene	3589	4374	.	-	.	ID=gene-C9F04_RS11555;Name=ompD;end_range=4374,.;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F04_RS11555;old_locus_tag=C9F04_11945;partial=true
NZ_PYKF01000393.1	Protein Homology	CDS	3589	4374	.	-	0	ID=cds-WP_146712657.1;Parent=gene-C9F04_RS11555;Dbxref=Genbank:WP_146712657.1;Name=WP_146712657.1;end_range=4374,.;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F04_RS11555;partial=true;product=porin OmpD;protein_id=WP_146712657.1;transl_table=11
##sequence-region NZ_PYKF01000225.1 1 18354
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000225.1	RefSeq	region	1	18354	.	+	.	ID=NZ_PYKF01000225.1:1..18354;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000225.1	RefSeq	pseudogene	1	451	.	-	.	ID=gene-C9F04_RS05755;Name=C9F04_RS05755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05755;old_locus_tag=C9F04_05935;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000225.1	Protein Homology	CDS	1	451	.	-	0	ID=cds-C9F04_RS05755;Parent=gene-C9F04_RS05755;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9F04_RS05755;partial=true;product=guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	570	1835	.	-	.	ID=gene-C9F04_RS05760;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9F04_RS05760;old_locus_tag=C9F04_05945
NZ_PYKF01000225.1	Protein Homology	CDS	570	1835	.	-	0	ID=cds-WP_146712401.1;Parent=gene-C9F04_RS05760;Dbxref=Genbank:WP_146712401.1;Name=WP_146712401.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9F04_RS05760;product=ATP-dependent RNA helicase RhlB;protein_id=WP_146712401.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	1979	2308	.	+	.	ID=gene-C9F04_RS05765;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9F04_RS05765;old_locus_tag=C9F04_05950
NZ_PYKF01000225.1	Protein Homology	CDS	1979	2308	.	+	0	ID=cds-WP_001280776.1;Parent=gene-C9F04_RS05765;Dbxref=Genbank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9F04_RS05765;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	2556	2639	.	+	.	ID=gene-C9F04_RS26930;Name=C9F04_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26930
NZ_PYKF01000225.1	Protein Homology	CDS	2556	2639	.	+	0	ID=cds-WP_134820045.1;Parent=gene-C9F04_RS26930;Dbxref=Genbank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9F04_RS26930;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	2727	3986	.	+	.	ID=gene-C9F04_RS05775;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9F04_RS05775;old_locus_tag=C9F04_05960
NZ_PYKF01000225.1	Protein Homology	CDS	2727	3986	.	+	0	ID=cds-WP_001054532.1;Parent=gene-C9F04_RS05775;Dbxref=Genbank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9F04_RS05775;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	4216	5319	.	+	.	ID=gene-C9F04_RS05780;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9F04_RS05780;old_locus_tag=C9F04_05965
NZ_PYKF01000225.1	Protein Homology	CDS	4216	5319	.	+	0	ID=cds-WP_000771937.1;Parent=gene-C9F04_RS05780;Dbxref=Genbank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=C9F04_RS05780;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	5331	6377	.	+	.	ID=gene-C9F04_RS05785;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9F04_RS05785;old_locus_tag=C9F04_05970
NZ_PYKF01000225.1	Protein Homology	CDS	5331	6377	.	+	0	ID=cds-WP_000193420.1;Parent=gene-C9F04_RS05785;Dbxref=Genbank:WP_000193420.1;Name=WP_000193420.1;Ontology_term=GO:0009103,GO:0009246,GO:0016021;gbkey=CDS;gene=wzzE;go_component=integral component of membrane|0016021||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9F04_RS05785;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193420.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	6433	7563	.	+	.	ID=gene-C9F04_RS05790;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9F04_RS05790;old_locus_tag=C9F04_05975
NZ_PYKF01000225.1	Protein Homology	CDS	6433	7563	.	+	0	ID=cds-WP_000866685.1;Parent=gene-C9F04_RS05790;Dbxref=Genbank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9F04_RS05790;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_000866685.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	7560	8822	.	+	.	ID=gene-C9F04_RS05795;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9F04_RS05795;old_locus_tag=C9F04_05980
NZ_PYKF01000225.1	Protein Homology	CDS	7560	8822	.	+	0	ID=cds-WP_000011225.1;Parent=gene-C9F04_RS05795;Dbxref=Genbank:WP_000011225.1;Name=WP_000011225.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9F04_RS05795;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011225.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	8822	9889	.	+	.	ID=gene-C9F04_RS05800;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9F04_RS05800;old_locus_tag=C9F04_05985
NZ_PYKF01000225.1	Protein Homology	CDS	8822	9889	.	+	0	ID=cds-WP_000822152.1;Parent=gene-C9F04_RS05800;Dbxref=Genbank:WP_000822152.1;Name=WP_000822152.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9F04_RS05800;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822152.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	9832	10146	.	+	.	ID=gene-C9F04_RS05805;Name=C9F04_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05805;old_locus_tag=C9F04_05990
NZ_PYKF01000225.1	Protein Homology	CDS	9832	10146	.	+	0	ID=cds-WP_223149427.1;Parent=gene-C9F04_RS05805;Dbxref=Genbank:WP_223149427.1;Name=WP_223149427.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658205.1;locus_tag=C9F04_RS05805;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223149427.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	10124	10801	.	+	.	ID=gene-C9F04_RS05810;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9F04_RS05810;old_locus_tag=C9F04_05995
NZ_PYKF01000225.1	Protein Homology	CDS	10124	10801	.	+	0	ID=cds-WP_001145157.1;Parent=gene-C9F04_RS05810;Dbxref=Genbank:WP_001145157.1;Name=WP_001145157.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9F04_RS05810;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145157.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	10806	11936	.	+	.	ID=gene-C9F04_RS05815;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9F04_RS05815;old_locus_tag=C9F04_06000
NZ_PYKF01000225.1	Protein Homology	CDS	10806	11936	.	+	0	ID=cds-WP_000612080.1;Parent=gene-C9F04_RS05815;Dbxref=Genbank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9F04_RS05815;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	11938	13188	.	+	.	ID=gene-C9F04_RS05820;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9F04_RS05820;old_locus_tag=C9F04_06005
NZ_PYKF01000225.1	Protein Homology	CDS	11938	13188	.	+	0	ID=cds-WP_146712402.1;Parent=gene-C9F04_RS05820;Dbxref=Genbank:WP_146712402.1;Name=WP_146712402.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9F04_RS05820;product=lipid III flippase WzxE;protein_id=WP_146712402.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	13185	14264	.	+	.	ID=gene-C9F04_RS05825;Name=C9F04_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05825;old_locus_tag=C9F04_06010
NZ_PYKF01000225.1	Protein Homology	CDS	13185	14264	.	+	0	ID=cds-WP_000217196.1;Parent=gene-C9F04_RS05825;Dbxref=Genbank:WP_000217196.1;Name=WP_000217196.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9F04_RS05825;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217196.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	14261	15619	.	+	.	ID=gene-C9F04_RS05830;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9F04_RS05830;old_locus_tag=C9F04_06015
NZ_PYKF01000225.1	Protein Homology	CDS	14261	15619	.	+	0	ID=cds-WP_000055605.1;Parent=gene-C9F04_RS05830;Dbxref=Genbank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016021;gbkey=CDS;gene=wzyE;go_component=integral component of membrane|0016021||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9F04_RS05830;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	15616	16356	.	+	.	ID=gene-C9F04_RS05835;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=C9F04_RS05835;old_locus_tag=C9F04_06020
NZ_PYKF01000225.1	Protein Homology	CDS	15616	16356	.	+	0	ID=cds-WP_000183623.1;Parent=gene-C9F04_RS05835;Dbxref=Genbank:WP_000183623.1;Name=WP_000183623.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9F04_RS05835;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183623.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	16563	17948	.	+	.	ID=gene-C9F04_RS05840;Name=C9F04_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05840;old_locus_tag=C9F04_06025
NZ_PYKF01000225.1	Protein Homology	CDS	16563	17948	.	+	0	ID=cds-WP_000818378.1;Parent=gene-C9F04_RS05840;Dbxref=Genbank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0006865,GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9F04_RS05840;product=amino acid permease;protein_id=WP_000818378.1;transl_table=11
NZ_PYKF01000225.1	RefSeq	gene	18051	18127	.	+	.	ID=gene-C9F04_RS05845;Name=C9F04_RS05845;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05845;old_locus_tag=C9F04_06030
NZ_PYKF01000225.1	tRNAscan-SE	tRNA	18051	18127	.	+	.	ID=rna-C9F04_RS05845;Parent=gene-C9F04_RS05845;anticodon=(pos:18085..18087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05845;product=tRNA-Arg
NZ_PYKF01000225.1	tRNAscan-SE	exon	18051	18127	.	+	.	ID=exon-C9F04_RS05845-1;Parent=rna-C9F04_RS05845;anticodon=(pos:18085..18087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05845;product=tRNA-Arg
NZ_PYKF01000225.1	RefSeq	gene	18182	18257	.	+	.	ID=gene-C9F04_RS05850;Name=C9F04_RS05850;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05850;old_locus_tag=C9F04_06035
NZ_PYKF01000225.1	tRNAscan-SE	tRNA	18182	18257	.	+	.	ID=rna-C9F04_RS05850;Parent=gene-C9F04_RS05850;anticodon=(pos:18215..18217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05850;product=tRNA-His
NZ_PYKF01000225.1	tRNAscan-SE	exon	18182	18257	.	+	.	ID=exon-C9F04_RS05850-1;Parent=rna-C9F04_RS05850;anticodon=(pos:18215..18217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05850;product=tRNA-His
##sequence-region NZ_PYKF01000457.1 1 4363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000457.1	RefSeq	region	1	4363	.	+	.	ID=NZ_PYKF01000457.1:1..4363;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000457.1	RefSeq	gene	1	995	.	-	.	ID=gene-C9F04_RS13770;Name=C9F04_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13770;old_locus_tag=C9F04_14215;partial=true;start_range=.,1
NZ_PYKF01000457.1	Protein Homology	CDS	1	995	.	-	0	ID=cds-WP_146712770.1;Parent=gene-C9F04_RS13770;Dbxref=Genbank:WP_146712770.1;Name=WP_146712770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F04_RS13770;partial=true;product=diguanylate cyclase;protein_id=WP_146712770.1;start_range=.,1;transl_table=11
NZ_PYKF01000457.1	RefSeq	gene	1257	3191	.	-	.	ID=gene-C9F04_RS13775;Name=C9F04_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13775;old_locus_tag=C9F04_14225
NZ_PYKF01000457.1	Protein Homology	CDS	1257	3191	.	-	0	ID=cds-WP_146712771.1;Parent=gene-C9F04_RS13775;Dbxref=Genbank:WP_146712771.1;Name=WP_146712771.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9F04_RS13775;product=exoribonuclease II;protein_id=WP_146712771.1;transl_table=11
NZ_PYKF01000457.1	RefSeq	gene	3280	4356	.	-	.	ID=gene-C9F04_RS13780;Name=C9F04_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13780;old_locus_tag=C9F04_14230
NZ_PYKF01000457.1	Protein Homology	CDS	3280	4356	.	-	0	ID=cds-WP_146712772.1;Parent=gene-C9F04_RS13780;Dbxref=Genbank:WP_146712772.1;Name=WP_146712772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434200.1;locus_tag=C9F04_RS13780;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_146712772.1;transl_table=11
##sequence-region NZ_PYKF01000196.1 1 4353
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000196.1	RefSeq	region	1	4353	.	+	.	ID=NZ_PYKF01000196.1:1..4353;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000196.1	RefSeq	pseudogene	1	175	.	-	.	ID=gene-C9F04_RS04615;Name=C9F04_RS04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04615;old_locus_tag=C9F04_04760;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000196.1	Protein Homology	CDS	1	175	.	-	0	ID=cds-C9F04_RS04615;Parent=gene-C9F04_RS04615;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9F04_RS04615;partial=true;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000196.1	RefSeq	gene	697	939	.	+	.	ID=gene-C9F04_RS04620;Name=C9F04_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04620;old_locus_tag=C9F04_04765
NZ_PYKF01000196.1	Protein Homology	CDS	697	939	.	+	0	ID=cds-WP_000639889.1;Parent=gene-C9F04_RS04620;Dbxref=Genbank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9F04_RS04620;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11
NZ_PYKF01000196.1	RefSeq	gene	1215	2606	.	-	.	ID=gene-C9F04_RS04625;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9F04_RS04625;old_locus_tag=C9F04_04770
NZ_PYKF01000196.1	Protein Homology	CDS	1215	2606	.	-	0	ID=cds-WP_020437486.1;Parent=gene-C9F04_RS04625;Dbxref=Genbank:WP_020437486.1;Name=WP_020437486.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9F04_RS04625;product=phosphoglycerate transporter PgtP;protein_id=WP_020437486.1;transl_table=11
NZ_PYKF01000196.1	RefSeq	gene	3042	4235	.	+	.	ID=gene-C9F04_RS04630;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9F04_RS04630;old_locus_tag=C9F04_04780
NZ_PYKF01000196.1	Protein Homology	CDS	3042	4235	.	+	0	ID=cds-WP_000467983.1;Parent=gene-C9F04_RS04630;Dbxref=Genbank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9F04_RS04630;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11
NZ_PYKF01000196.1	RefSeq	pseudogene	4232	4353	.	+	.	ID=gene-C9F04_RS04635;Name=C9F04_RS04635;end_range=4353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04635;old_locus_tag=C9F04_04785;partial=true;pseudo=true
NZ_PYKF01000196.1	Protein Homology	CDS	4232	4353	.	+	0	ID=cds-C9F04_RS04635;Parent=gene-C9F04_RS04635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9F04_RS04635;partial=true;product=histidine kinase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000558.1 1 4344
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000558.1	RefSeq	region	1	4344	.	+	.	ID=NZ_PYKF01000558.1:1..4344;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000558.1	RefSeq	gene	1	634	.	-	.	ID=gene-C9F04_RS16705;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9F04_RS16705;old_locus_tag=C9F04_17230;partial=true;start_range=.,1
NZ_PYKF01000558.1	Protein Homology	CDS	1	634	.	-	0	ID=cds-WP_146712902.1;Parent=gene-C9F04_RS16705;Dbxref=Genbank:WP_146712902.1;Name=WP_146712902.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9F04_RS16705;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_146712902.1;start_range=.,1;transl_table=11
NZ_PYKF01000558.1	RefSeq	gene	645	1661	.	-	.	ID=gene-C9F04_RS16710;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9F04_RS16710;old_locus_tag=C9F04_17235
NZ_PYKF01000558.1	Protein Homology	CDS	645	1661	.	-	0	ID=cds-WP_146712903.1;Parent=gene-C9F04_RS16710;Dbxref=Genbank:WP_146712903.1;Name=WP_146712903.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9F04_RS16710;product=UDP-glucose 4-epimerase GalE;protein_id=WP_146712903.1;transl_table=11
NZ_PYKF01000558.1	RefSeq	gene	1884	2792	.	-	.	ID=gene-C9F04_RS16715;Name=C9F04_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16715;old_locus_tag=C9F04_17240
NZ_PYKF01000558.1	Protein Homology	CDS	1884	2792	.	-	0	ID=cds-WP_135369194.1;Parent=gene-C9F04_RS16715;Dbxref=Genbank:WP_135369194.1;Name=WP_135369194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9F04_RS16715;product=DUF2167 domain-containing protein;protein_id=WP_135369194.1;transl_table=11
NZ_PYKF01000558.1	RefSeq	gene	2963	4344	.	-	.	ID=gene-C9F04_RS16720;Name=modF;end_range=4344,.;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9F04_RS16720;old_locus_tag=C9F04_17245;partial=true
NZ_PYKF01000558.1	Protein Homology	CDS	2963	4344	.	-	2	ID=cds-WP_146712904.1;Parent=gene-C9F04_RS16720;Dbxref=Genbank:WP_146712904.1;Name=WP_146712904.1;Ontology_term=GO:0005524;end_range=4344,.;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9F04_RS16720;partial=true;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_146712904.1;transl_table=11
##sequence-region NZ_PYKF01000039.1 1 4313
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000039.1	RefSeq	region	1	4313	.	+	.	ID=NZ_PYKF01000039.1:1..4313;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000039.1	RefSeq	gene	1	838	.	-	.	ID=gene-C9F04_RS00570;Name=C9F04_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00570;old_locus_tag=C9F04_00605;partial=true;start_range=.,1
NZ_PYKF01000039.1	Protein Homology	CDS	1	838	.	-	0	ID=cds-WP_146712155.1;Parent=gene-C9F04_RS00570;Dbxref=Genbank:WP_146712155.1;Name=WP_146712155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9F04_RS00570;partial=true;product=oxidoreductase;protein_id=WP_146712155.1;start_range=.,1;transl_table=11
NZ_PYKF01000039.1	RefSeq	gene	1042	2982	.	+	.	ID=gene-C9F04_RS00575;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9F04_RS00575;old_locus_tag=C9F04_00610
NZ_PYKF01000039.1	Protein Homology	CDS	1042	2982	.	+	0	ID=cds-WP_001241381.1;Parent=gene-C9F04_RS00575;Dbxref=Genbank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9F04_RS00575;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11
NZ_PYKF01000039.1	RefSeq	gene	3290	4313	.	+	.	ID=gene-C9F04_RS00580;Name=C9F04_RS00580;end_range=4313,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00580;old_locus_tag=C9F04_00625;partial=true
NZ_PYKF01000039.1	Protein Homology	CDS	3290	4313	.	+	0	ID=cds-WP_146712156.1;Parent=gene-C9F04_RS00580;Dbxref=Genbank:WP_146712156.1;Name=WP_146712156.1;end_range=4313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094393.1;locus_tag=C9F04_RS00580;partial=true;product=rod shape-determining protein;protein_id=WP_146712156.1;transl_table=11
##sequence-region NZ_PYKF01000705.1 1 4302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000705.1	RefSeq	region	1	4302	.	+	.	ID=NZ_PYKF01000705.1:1..4302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000705.1	RefSeq	gene	1	2027	.	-	.	ID=gene-C9F04_RS21905;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9F04_RS21905;old_locus_tag=C9F04_22635;partial=true;start_range=.,1
NZ_PYKF01000705.1	Protein Homology	CDS	1	2027	.	-	0	ID=cds-WP_146713169.1;Parent=gene-C9F04_RS21905;Dbxref=Genbank:WP_146713169.1;Name=WP_146713169.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F04_RS21905;partial=true;product=protein lysine acetyltransferase;protein_id=WP_146713169.1;start_range=.,1;transl_table=11
NZ_PYKF01000705.1	RefSeq	gene	2081	2761	.	-	.	ID=gene-C9F04_RS21910;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9F04_RS21910;old_locus_tag=C9F04_22640
NZ_PYKF01000705.1	Protein Homology	CDS	2081	2761	.	-	0	ID=cds-WP_146713170.1;Parent=gene-C9F04_RS21910;Dbxref=Genbank:WP_146713170.1;Name=WP_146713170.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9F04_RS21910;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_146713170.1;transl_table=11
NZ_PYKF01000705.1	RefSeq	gene	2834	3253	.	-	.	ID=gene-C9F04_RS21915;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9F04_RS21915;old_locus_tag=C9F04_22645
NZ_PYKF01000705.1	Protein Homology	CDS	2834	3253	.	-	0	ID=cds-WP_001098732.1;Parent=gene-C9F04_RS21915;Dbxref=Genbank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9F04_RS21915;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11
NZ_PYKF01000705.1	RefSeq	gene	3457	4302	.	+	.	ID=gene-C9F04_RS21920;Name=C9F04_RS21920;end_range=4302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21920;old_locus_tag=C9F04_22650;partial=true
NZ_PYKF01000705.1	Protein Homology	CDS	3457	4302	.	+	0	ID=cds-WP_146713171.1;Parent=gene-C9F04_RS21920;Dbxref=Genbank:WP_146713171.1;Name=WP_146713171.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;end_range=4302,.;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9F04_RS21920;partial=true;product=tRNA/rRNA methyltransferase;protein_id=WP_146713171.1;transl_table=11
##sequence-region NZ_PYKF01000808.1 1 4296
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000808.1	RefSeq	region	1	4296	.	+	.	ID=NZ_PYKF01000808.1:1..4296;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000808.1	RefSeq	gene	1	925	.	+	.	ID=gene-C9F04_RS25320;Name=C9F04_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25320;old_locus_tag=C9F04_26185;partial=true;start_range=.,1
NZ_PYKF01000808.1	Protein Homology	CDS	1	925	.	+	1	ID=cds-WP_261771507.1;Parent=gene-C9F04_RS25320;Dbxref=Genbank:WP_261771507.1;Name=WP_261771507.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=C9F04_RS25320;partial=true;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_261771507.1;start_range=.,1;transl_table=11
NZ_PYKF01000808.1	RefSeq	gene	938	1897	.	+	.	ID=gene-C9F04_RS25325;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9F04_RS25325;old_locus_tag=C9F04_26190
NZ_PYKF01000808.1	Protein Homology	CDS	938	1897	.	+	0	ID=cds-WP_000055753.1;Parent=gene-C9F04_RS25325;Dbxref=Genbank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F04_RS25325;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11
NZ_PYKF01000808.1	RefSeq	gene	2077	3840	.	+	.	ID=gene-C9F04_RS25330;Name=C9F04_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25330;old_locus_tag=C9F04_26195
NZ_PYKF01000808.1	Protein Homology	CDS	2077	3840	.	+	0	ID=cds-WP_000524168.1;Parent=gene-C9F04_RS25330;Dbxref=Genbank:WP_000524168.1;Name=WP_000524168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9F04_RS25330;product=PKD domain-containing protein;protein_id=WP_000524168.1;transl_table=11
NZ_PYKF01000808.1	RefSeq	pseudogene	3916	4296	.	+	.	ID=gene-C9F04_RS25335;Name=C9F04_RS25335;end_range=4296,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25335;old_locus_tag=C9F04_26200;partial=true;pseudo=true
NZ_PYKF01000808.1	Protein Homology	CDS	3916	4296	.	+	0	ID=cds-C9F04_RS25335;Parent=gene-C9F04_RS25335;Note=constitutive%3B catalyzes the formation of cadaverine from lysine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9F04_RS25335;partial=true;product=lysine decarboxylase LdcC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000631.1 1 4288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000631.1	RefSeq	region	1	4288	.	+	.	ID=NZ_PYKF01000631.1:1..4288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000631.1	RefSeq	gene	178	1404	.	+	.	ID=gene-C9F04_RS19185;Name=C9F04_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19185;old_locus_tag=C9F04_19810
NZ_PYKF01000631.1	Protein Homology	CDS	178	1404	.	+	0	ID=cds-WP_061378611.1;Parent=gene-C9F04_RS19185;Dbxref=Genbank:WP_061378611.1;Name=WP_061378611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9F04_RS19185;product=DUF3748 domain-containing protein;protein_id=WP_061378611.1;transl_table=11
NZ_PYKF01000631.1	RefSeq	gene	1406	1738	.	-	.	ID=gene-C9F04_RS19190;Name=C9F04_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19190;old_locus_tag=C9F04_19815
NZ_PYKF01000631.1	Protein Homology	CDS	1406	1738	.	-	0	ID=cds-WP_001581211.1;Parent=gene-C9F04_RS19190;Dbxref=Genbank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9F04_RS19190;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11
NZ_PYKF01000631.1	cmsearch	sequence_feature	1981	2054	.	+	.	ID=id-NZ_PYKF01000631.1:1981..2054;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000631.1	RefSeq	gene	2048	2461	.	+	.	ID=gene-C9F04_RS19195;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9F04_RS19195;old_locus_tag=C9F04_19820
NZ_PYKF01000631.1	Protein Homology	CDS	2048	2461	.	+	0	ID=cds-WP_088759359.1;Parent=gene-C9F04_RS19195;Dbxref=Genbank:WP_088759359.1;Name=WP_088759359.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9F04_RS19195;product=heat shock chaperone IbpA;protein_id=WP_088759359.1;transl_table=11
NZ_PYKF01000631.1	RefSeq	gene	2571	2999	.	+	.	ID=gene-C9F04_RS19200;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9F04_RS19200;old_locus_tag=C9F04_19825
NZ_PYKF01000631.1	Protein Homology	CDS	2571	2999	.	+	0	ID=cds-WP_001246919.1;Parent=gene-C9F04_RS19200;Dbxref=Genbank:WP_001246919.1;Name=WP_001246919.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9F04_RS19200;product=heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11
NZ_PYKF01000631.1	RefSeq	gene	3188	4288	.	+	.	ID=gene-C9F04_RS19205;Name=C9F04_RS19205;end_range=4288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19205;old_locus_tag=C9F04_19830;partial=true
NZ_PYKF01000631.1	Protein Homology	CDS	3188	4288	.	+	0	ID=cds-WP_146713028.1;Parent=gene-C9F04_RS19205;Dbxref=Genbank:WP_146713028.1;Name=WP_146713028.1;Ontology_term=GO:0006813,GO:0008324;end_range=4288,.;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F04_RS19205;partial=true;product=putative transporter;protein_id=WP_146713028.1;transl_table=11
##sequence-region NZ_PYKF01000814.1 1 4259
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000814.1	RefSeq	region	1	4259	.	+	.	ID=NZ_PYKF01000814.1:1..4259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000814.1	RefSeq	pseudogene	1	554	.	+	.	ID=gene-C9F04_RS25565;Name=C9F04_RS25565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25565;old_locus_tag=C9F04_26440;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000814.1	Protein Homology	CDS	1	554	.	+	2	ID=cds-C9F04_RS25565;Parent=gene-C9F04_RS25565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F04_RS25565;partial=true;product=flotillin;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000814.1	RefSeq	gene	794	853	.	+	.	ID=gene-C9F04_RS26830;Name=C9F04_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26830
NZ_PYKF01000814.1	Protein Homology	CDS	794	853	.	+	0	ID=cds-WP_001804776.1;Parent=gene-C9F04_RS26830;Dbxref=Genbank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9F04_RS26830;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11
NZ_PYKF01000814.1	RefSeq	gene	1013	2446	.	-	.	ID=gene-C9F04_RS25575;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9F04_RS25575;old_locus_tag=C9F04_26450
NZ_PYKF01000814.1	Protein Homology	CDS	1013	2446	.	-	0	ID=cds-WP_000867680.1;Parent=gene-C9F04_RS25575;Dbxref=Genbank:WP_000867680.1;Name=WP_000867680.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9F04_RS25575;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867680.1;transl_table=11
NZ_PYKF01000814.1	RefSeq	gene	2494	4259	.	-	.	ID=gene-C9F04_RS25580;Name=glnE;end_range=4259,.;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9F04_RS25580;old_locus_tag=C9F04_26455;partial=true
NZ_PYKF01000814.1	Protein Homology	CDS	2494	4259	.	-	2	ID=cds-WP_146713356.1;Parent=gene-C9F04_RS25580;Dbxref=Genbank:WP_146713356.1;Name=WP_146713356.1;Ontology_term=GO:0008882;end_range=4259,.;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9F04_RS25580;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_146713356.1;transl_table=11
##sequence-region NZ_PYKF01000644.1 1 4256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000644.1	RefSeq	region	1	4256	.	+	.	ID=NZ_PYKF01000644.1:1..4256;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000644.1	RefSeq	pseudogene	76	1059	.	-	.	ID=gene-C9F04_RS19755;Name=C9F04_RS19755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19755;old_locus_tag=C9F04_20400;partial=true;pseudo=true;start_range=.,76
NZ_PYKF01000644.1	Protein Homology	CDS	76	1059	.	-	0	ID=cds-C9F04_RS19755;Parent=gene-C9F04_RS19755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9F04_RS19755;partial=true;product=molybdopterin-dependent oxidoreductase;pseudo=true;start_range=.,76;transl_table=11
NZ_PYKF01000644.1	RefSeq	gene	1049	2233	.	-	.	ID=gene-C9F04_RS19760;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9F04_RS19760;old_locus_tag=C9F04_20405
NZ_PYKF01000644.1	Protein Homology	CDS	1049	2233	.	-	0	ID=cds-WP_146713059.1;Parent=gene-C9F04_RS19760;Dbxref=Genbank:WP_146713059.1;Name=WP_146713059.1;Ontology_term=GO:0009055,GO:0020037,GO:0016021;gbkey=CDS;gene=torC;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9F04_RS19760;product=pentaheme c-type cytochrome TorC;protein_id=WP_146713059.1;transl_table=11
NZ_PYKF01000644.1	RefSeq	gene	2363	3055	.	+	.	ID=gene-C9F04_RS19765;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9F04_RS19765;old_locus_tag=C9F04_20410
NZ_PYKF01000644.1	Protein Homology	CDS	2363	3055	.	+	0	ID=cds-WP_001562512.1;Parent=gene-C9F04_RS19765;Dbxref=Genbank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9F04_RS19765;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11
NZ_PYKF01000644.1	RefSeq	gene	3028	4068	.	-	.	ID=gene-C9F04_RS19770;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9F04_RS19770;old_locus_tag=C9F04_20415
NZ_PYKF01000644.1	Protein Homology	CDS	3028	4068	.	-	0	ID=cds-WP_045901455.1;Parent=gene-C9F04_RS19770;Dbxref=Genbank:WP_045901455.1;Name=WP_045901455.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9F04_RS19770;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_045901455.1;transl_table=11
##sequence-region NZ_PYKF01000182.1 1 4233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000182.1	RefSeq	region	1	4233	.	+	.	ID=NZ_PYKF01000182.1:1..4233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000182.1	RefSeq	gene	1	422	.	-	.	ID=gene-C9F04_RS04150;Name=C9F04_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04150;old_locus_tag=C9F04_04295;partial=true;start_range=.,1
NZ_PYKF01000182.1	Protein Homology	CDS	1	422	.	-	0	ID=cds-WP_146634340.1;Parent=gene-C9F04_RS04150;Dbxref=Genbank:WP_146634340.1;Name=WP_146634340.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9F04_RS04150;partial=true;product=LysR family transcriptional regulator;protein_id=WP_146634340.1;start_range=.,1;transl_table=11
NZ_PYKF01000182.1	RefSeq	gene	531	1391	.	+	.	ID=gene-C9F04_RS04155;Name=C9F04_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04155;old_locus_tag=C9F04_04300
NZ_PYKF01000182.1	Protein Homology	CDS	531	1391	.	+	0	ID=cds-WP_000809969.1;Parent=gene-C9F04_RS04155;Dbxref=Genbank:WP_000809969.1;Name=WP_000809969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9F04_RS04155;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11
NZ_PYKF01000182.1	RefSeq	gene	1411	2088	.	+	.	ID=gene-C9F04_RS04160;Name=C9F04_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04160;old_locus_tag=C9F04_04305
NZ_PYKF01000182.1	Protein Homology	CDS	1411	2088	.	+	0	ID=cds-WP_000097893.1;Parent=gene-C9F04_RS04160;Dbxref=Genbank:WP_000097893.1;Name=WP_000097893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9F04_RS04160;product=hydrolase;protein_id=WP_000097893.1;transl_table=11
NZ_PYKF01000182.1	RefSeq	gene	2236	2323	.	+	.	ID=gene-C9F04_RS04165;Name=C9F04_RS04165;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS04165;old_locus_tag=C9F04_04310
NZ_PYKF01000182.1	tRNAscan-SE	tRNA	2236	2323	.	+	.	ID=rna-C9F04_RS04165;Parent=gene-C9F04_RS04165;anticodon=(pos:2270..2272);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS04165;product=tRNA-Ser
NZ_PYKF01000182.1	tRNAscan-SE	exon	2236	2323	.	+	.	ID=exon-C9F04_RS04165-1;Parent=rna-C9F04_RS04165;anticodon=(pos:2270..2272);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS04165;product=tRNA-Ser
NZ_PYKF01000182.1	RefSeq	gene	2512	4233	.	-	.	ID=gene-C9F04_RS04170;Name=C9F04_RS04170;end_range=4233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04170;old_locus_tag=C9F04_04315;partial=true
NZ_PYKF01000182.1	Protein Homology	CDS	2512	4233	.	-	0	ID=cds-WP_146712322.1;Parent=gene-C9F04_RS04170;Dbxref=Genbank:WP_146712322.1;Name=WP_146712322.1;Ontology_term=GO:0005524,GO:0016887;end_range=4233,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F04_RS04170;partial=true;product=AAA family ATPase;protein_id=WP_146712322.1;transl_table=11
##sequence-region NZ_PYKF01000609.1 1 18297
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000609.1	RefSeq	region	1	18297	.	+	.	ID=NZ_PYKF01000609.1:1..18297;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000609.1	RefSeq	pseudogene	1	162	.	+	.	ID=gene-C9F04_RS27170;Name=C9F04_RS27170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000609.1	Protein Homology	CDS	1	162	.	+	0	ID=cds-C9F04_RS27170;Parent=gene-C9F04_RS27170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9F04_RS27170;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	162	917	.	+	.	ID=gene-C9F04_RS18290;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9F04_RS18290;old_locus_tag=C9F04_18885
NZ_PYKF01000609.1	Protein Homology	CDS	162	917	.	+	0	ID=cds-WP_135369413.1;Parent=gene-C9F04_RS18290;Dbxref=Genbank:WP_135369413.1;Name=WP_135369413.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9F04_RS18290;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_135369413.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	920	1333	.	+	.	ID=gene-C9F04_RS18295;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9F04_RS18295;old_locus_tag=C9F04_18890
NZ_PYKF01000609.1	Protein Homology	CDS	920	1333	.	+	0	ID=cds-WP_000637966.1;Parent=gene-C9F04_RS18295;Dbxref=Genbank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9F04_RS18295;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	1515	3620	.	+	.	ID=gene-C9F04_RS18300;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9F04_RS18300;old_locus_tag=C9F04_18895
NZ_PYKF01000609.1	Protein Homology	CDS	1515	3620	.	+	0	ID=cds-WP_001043108.1;Parent=gene-C9F04_RS18300;Dbxref=Genbank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9F04_RS18300;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	3684	3881	.	+	.	ID=gene-C9F04_RS18305;Name=C9F04_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18305;old_locus_tag=C9F04_18900
NZ_PYKF01000609.1	Protein Homology	CDS	3684	3881	.	+	0	ID=cds-WP_000460619.1;Parent=gene-C9F04_RS18305;Dbxref=Genbank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9F04_RS18305;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	pseudogene	3917	5005	.	-	.	ID=gene-C9F04_RS18310;Name=C9F04_RS18310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18310;old_locus_tag=C9F04_18905;pseudo=true
NZ_PYKF01000609.1	Protein Homology	CDS	3917	5005	.	-	0	ID=cds-C9F04_RS18310;Parent=gene-C9F04_RS18310;Note=internal stop;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9F04_RS18310;product=oxidoreductase;pseudo=true;transl_table=11
NZ_PYKF01000609.1	RefSeq	pseudogene	5132	6292	.	+	.	ID=gene-C9F04_RS18315;Name=C9F04_RS18315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18315;old_locus_tag=C9F04_18910;pseudo=true
NZ_PYKF01000609.1	Protein Homology	CDS	5132	6292	.	+	0	ID=cds-C9F04_RS18315;Parent=gene-C9F04_RS18315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9F04_RS18315;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	6293	6910	.	-	.	ID=gene-C9F04_RS18320;Name=C9F04_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18320;old_locus_tag=C9F04_18915
NZ_PYKF01000609.1	Protein Homology	CDS	6293	6910	.	-	0	ID=cds-WP_001164756.1;Parent=gene-C9F04_RS18320;Dbxref=Genbank:WP_001164756.1;Name=WP_001164756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9F04_RS18320;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001164756.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	6883	8118	.	-	.	ID=gene-C9F04_RS18325;Name=C9F04_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18325;old_locus_tag=C9F04_18920
NZ_PYKF01000609.1	Protein Homology	CDS	6883	8118	.	-	0	ID=cds-WP_080150858.1;Parent=gene-C9F04_RS18325;Dbxref=Genbank:WP_080150858.1;Name=WP_080150858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9F04_RS18325;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_080150858.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	8284	9186	.	-	.	ID=gene-C9F04_RS18330;Name=C9F04_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18330;old_locus_tag=C9F04_18925
NZ_PYKF01000609.1	Protein Homology	CDS	8284	9186	.	-	0	ID=cds-WP_050068253.1;Parent=gene-C9F04_RS18330;Dbxref=Genbank:WP_050068253.1;Name=WP_050068253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9F04_RS18330;product=LysR family transcriptional regulator;protein_id=WP_050068253.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	9503	10249	.	-	.	ID=gene-C9F04_RS18335;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9F04_RS18335;old_locus_tag=C9F04_18935
NZ_PYKF01000609.1	Protein Homology	CDS	9503	10249	.	-	0	ID=cds-WP_135369415.1;Parent=gene-C9F04_RS18335;Dbxref=Genbank:WP_135369415.1;Name=WP_135369415.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9F04_RS18335;product=thiol:disulfide interchange protein DsbG;protein_id=WP_135369415.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	10690	11253	.	+	.	ID=gene-C9F04_RS18340;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9F04_RS18340;old_locus_tag=C9F04_18940
NZ_PYKF01000609.1	Protein Homology	CDS	10690	11253	.	+	0	ID=cds-WP_000052802.1;Parent=gene-C9F04_RS18340;Dbxref=Genbank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9F04_RS18340;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	11495	13060	.	+	.	ID=gene-C9F04_RS18345;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9F04_RS18345;old_locus_tag=C9F04_18945
NZ_PYKF01000609.1	Protein Homology	CDS	11495	13060	.	+	0	ID=cds-WP_000887644.1;Parent=gene-C9F04_RS18345;Dbxref=Genbank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9F04_RS18345;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	13393	13953	.	+	.	ID=gene-C9F04_RS18350;Name=C9F04_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18350;old_locus_tag=C9F04_18950
NZ_PYKF01000609.1	Protein Homology	CDS	13393	13953	.	+	0	ID=cds-WP_146712986.1;Parent=gene-C9F04_RS18350;Dbxref=Genbank:WP_146712986.1;Name=WP_146712986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9F04_RS18350;product=molecular chaperone;protein_id=WP_146712986.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	13946	16225	.	+	.	ID=gene-C9F04_RS18355;Name=C9F04_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18355;old_locus_tag=C9F04_18955
NZ_PYKF01000609.1	Protein Homology	CDS	13946	16225	.	+	0	ID=cds-WP_146712987.1;Parent=gene-C9F04_RS18355;Dbxref=Genbank:WP_146712987.1;Name=WP_146712987.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F04_RS18355;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146712987.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	16222	16779	.	+	.	ID=gene-C9F04_RS18360;Name=C9F04_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18360;old_locus_tag=C9F04_18960
NZ_PYKF01000609.1	Protein Homology	CDS	16222	16779	.	+	0	ID=cds-WP_001250381.1;Parent=gene-C9F04_RS18360;Dbxref=Genbank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9F04_RS18360;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	16779	17546	.	+	.	ID=gene-C9F04_RS18365;Name=C9F04_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18365;old_locus_tag=C9F04_18965
NZ_PYKF01000609.1	Protein Homology	CDS	16779	17546	.	+	0	ID=cds-WP_146712988.1;Parent=gene-C9F04_RS18365;Dbxref=Genbank:WP_146712988.1;Name=WP_146712988.1;Ontology_term=GO:0019645,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9F04_RS18365;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_146712988.1;transl_table=11
NZ_PYKF01000609.1	RefSeq	gene	17614	18042	.	-	.	ID=gene-C9F04_RS18370;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9F04_RS18370;old_locus_tag=C9F04_18970
NZ_PYKF01000609.1	Protein Homology	CDS	17614	18042	.	-	0	ID=cds-WP_000278499.1;Parent=gene-C9F04_RS18370;Dbxref=Genbank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9F04_RS18370;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11
##sequence-region NZ_PYKF01000299.1 1 4229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000299.1	RefSeq	region	1	4229	.	+	.	ID=NZ_PYKF01000299.1:1..4229;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000299.1	RefSeq	gene	249	803	.	+	.	ID=gene-C9F04_RS08690;Name=C9F04_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08690;old_locus_tag=C9F04_08980
NZ_PYKF01000299.1	Protein Homology	CDS	249	803	.	+	0	ID=cds-WP_146712511.1;Parent=gene-C9F04_RS08690;Dbxref=Genbank:WP_146712511.1;Name=WP_146712511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9F04_RS08690;product=gamma carbonic anhydrase family protein;protein_id=WP_146712511.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	779	1036	.	-	.	ID=gene-C9F04_RS08695;Name=C9F04_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08695;old_locus_tag=C9F04_08985
NZ_PYKF01000299.1	Protein Homology	CDS	779	1036	.	-	0	ID=cds-WP_001070576.1;Parent=gene-C9F04_RS08695;Dbxref=Genbank:WP_001070576.1;Name=WP_001070576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9F04_RS08695;product=DUF1488 domain-containing protein;protein_id=WP_001070576.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	1033	1851	.	-	.	ID=gene-C9F04_RS08700;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9F04_RS08700;old_locus_tag=C9F04_08990
NZ_PYKF01000299.1	Protein Homology	CDS	1033	1851	.	-	0	ID=cds-WP_146712513.1;Parent=gene-C9F04_RS08700;Dbxref=Genbank:WP_146712513.1;Name=WP_146712513.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9F04_RS08700;product=shikimate dehydrogenase;protein_id=WP_146712513.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	1856	2428	.	-	.	ID=gene-C9F04_RS08705;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9F04_RS08705;old_locus_tag=C9F04_08995
NZ_PYKF01000299.1	Protein Homology	CDS	1856	2428	.	-	0	ID=cds-WP_135369085.1;Parent=gene-C9F04_RS08705;Dbxref=Genbank:WP_135369085.1;Name=WP_135369085.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9F04_RS08705;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_135369085.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	2433	2975	.	-	.	ID=gene-C9F04_RS08710;Name=C9F04_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08710;old_locus_tag=C9F04_09000
NZ_PYKF01000299.1	Protein Homology	CDS	2433	2975	.	-	0	ID=cds-WP_135369086.1;Parent=gene-C9F04_RS08710;Dbxref=Genbank:WP_135369086.1;Name=WP_135369086.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9F04_RS08710;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_135369086.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	3002	3475	.	-	.	ID=gene-C9F04_RS08715;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9F04_RS08715;old_locus_tag=C9F04_09005
NZ_PYKF01000299.1	Protein Homology	CDS	3002	3475	.	-	0	ID=cds-WP_000460663.1;Parent=gene-C9F04_RS08715;Dbxref=Genbank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9F04_RS08715;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11
NZ_PYKF01000299.1	RefSeq	gene	3447	4229	.	-	.	ID=gene-C9F04_RS08720;Name=dprA;end_range=4229,.;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9F04_RS08720;old_locus_tag=C9F04_09010;partial=true
NZ_PYKF01000299.1	Protein Homology	CDS	3447	4229	.	-	0	ID=cds-WP_146712512.1;Parent=gene-C9F04_RS08720;Dbxref=Genbank:WP_146712512.1;Name=WP_146712512.1;Ontology_term=GO:0009294;end_range=4229,.;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9F04_RS08720;partial=true;product=DNA-protecting protein DprA;protein_id=WP_146712512.1;transl_table=11
##sequence-region NZ_PYKF01000610.1 1 4228
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000610.1	RefSeq	region	1	4228	.	+	.	ID=NZ_PYKF01000610.1:1..4228;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000610.1	RefSeq	gene	1	102	.	-	.	ID=gene-C9F04_RS18375;Name=C9F04_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18375;old_locus_tag=C9F04_18975;partial=true;start_range=.,1
NZ_PYKF01000610.1	Protein Homology	CDS	1	102	.	-	0	ID=cds-WP_261771359.1;Parent=gene-C9F04_RS18375;Dbxref=Genbank:WP_261771359.1;Name=WP_261771359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687383.1;locus_tag=C9F04_RS18375;partial=true;product=DUF2559 family protein;protein_id=WP_261771359.1;start_range=.,1;transl_table=11
NZ_PYKF01000610.1	RefSeq	gene	196	768	.	-	.	ID=gene-C9F04_RS18380;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9F04_RS18380;old_locus_tag=C9F04_18980
NZ_PYKF01000610.1	Protein Homology	CDS	196	768	.	-	0	ID=cds-WP_146712989.1;Parent=gene-C9F04_RS18380;Dbxref=Genbank:WP_146712989.1;Name=WP_146712989.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9F04_RS18380;product=peptidylprolyl isomerase A;protein_id=WP_146712989.1;transl_table=11
NZ_PYKF01000610.1	RefSeq	gene	1045	2226	.	+	.	ID=gene-C9F04_RS18385;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9F04_RS18385;old_locus_tag=C9F04_18985
NZ_PYKF01000610.1	Protein Homology	CDS	1045	2226	.	+	0	ID=cds-WP_000185211.1;Parent=gene-C9F04_RS18385;Dbxref=Genbank:WP_000185211.1;Name=WP_000185211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9F04_RS18385;product=MFS transporter TsgA;protein_id=WP_000185211.1;transl_table=11
NZ_PYKF01000610.1	RefSeq	gene	2543	4228	.	+	.	ID=gene-C9F04_RS18390;Name=nirB;end_range=4228,.;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=C9F04_RS18390;old_locus_tag=C9F04_18990;partial=true
NZ_PYKF01000610.1	Protein Homology	CDS	2543	4228	.	+	0	ID=cds-WP_146712990.1;Parent=gene-C9F04_RS18390;Dbxref=Genbank:WP_146712990.1;Name=WP_146712990.1;end_range=4228,.;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F04_RS18390;partial=true;product=NADPH-nitrite reductase large subunit;protein_id=WP_146712990.1;transl_table=11
##sequence-region NZ_PYKF01000688.1 1 4202
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000688.1	RefSeq	region	1	4202	.	+	.	ID=NZ_PYKF01000688.1:1..4202;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000688.1	RefSeq	gene	1	853	.	+	.	ID=gene-C9F04_RS21210;Name=C9F04_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21210;old_locus_tag=C9F04_21900;partial=true;start_range=.,1
NZ_PYKF01000688.1	Protein Homology	CDS	1	853	.	+	1	ID=cds-WP_146713131.1;Parent=gene-C9F04_RS21210;Dbxref=Genbank:WP_146713131.1;Name=WP_146713131.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F04_RS21210;partial=true;product=response regulator;protein_id=WP_146713131.1;start_range=.,1;transl_table=11
NZ_PYKF01000688.1	RefSeq	gene	958	2085	.	-	.	ID=gene-C9F04_RS21215;Name=C9F04_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21215;old_locus_tag=C9F04_21905
NZ_PYKF01000688.1	Protein Homology	CDS	958	2085	.	-	0	ID=cds-WP_023224010.1;Parent=gene-C9F04_RS21215;Dbxref=Genbank:WP_023224010.1;Name=WP_023224010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=C9F04_RS21215;product=DUF4056 domain-containing protein;protein_id=WP_023224010.1;transl_table=11
NZ_PYKF01000688.1	RefSeq	gene	2082	3221	.	-	.	ID=gene-C9F04_RS21220;Name=C9F04_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21220;old_locus_tag=C9F04_21910
NZ_PYKF01000688.1	Protein Homology	CDS	2082	3221	.	-	0	ID=cds-WP_050067751.1;Parent=gene-C9F04_RS21220;Dbxref=Genbank:WP_050067751.1;Name=WP_050067751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=C9F04_RS21220;product=BamA/TamA family outer membrane protein;protein_id=WP_050067751.1;transl_table=11
NZ_PYKF01000688.1	RefSeq	gene	3218	4159	.	-	.	ID=gene-C9F04_RS21225;Name=C9F04_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21225;old_locus_tag=C9F04_21915
NZ_PYKF01000688.1	Protein Homology	CDS	3218	4159	.	-	0	ID=cds-WP_261771435.1;Parent=gene-C9F04_RS21225;Dbxref=Genbank:WP_261771435.1;Name=WP_261771435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687734.1;locus_tag=C9F04_RS21225;product=hypothetical protein;protein_id=WP_261771435.1;transl_table=11
##sequence-region NZ_PYKF01000248.1 1 4160
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000248.1	RefSeq	region	1	4160	.	+	.	ID=NZ_PYKF01000248.1:1..4160;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000248.1	RefSeq	gene	1	113	.	-	.	ID=gene-C9F04_RS06710;Name=C9F04_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06710;old_locus_tag=C9F04_06930;partial=true;start_range=.,1
NZ_PYKF01000248.1	Protein Homology	CDS	1	113	.	-	0	ID=cds-WP_001710386.1-2;Parent=gene-C9F04_RS06710;Dbxref=Genbank:WP_001710386.1;Name=WP_001710386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9F04_RS06710;partial=true;product=4Fe-4S binding protein;protein_id=WP_001710386.1;start_range=.,1;transl_table=11
NZ_PYKF01000248.1	RefSeq	gene	124	2559	.	-	.	ID=gene-C9F04_RS06715;Name=C9F04_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06715;old_locus_tag=C9F04_06935
NZ_PYKF01000248.1	Protein Homology	CDS	124	2559	.	-	0	ID=cds-WP_146712434.1;Parent=gene-C9F04_RS06715;Dbxref=Genbank:WP_146712434.1;Name=WP_146712434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9F04_RS06715;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_146712434.1;transl_table=11
NZ_PYKF01000248.1	RefSeq	gene	2658	4160	.	-	.	ID=gene-C9F04_RS06720;Name=C9F04_RS06720;end_range=4160,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06720;old_locus_tag=C9F04_06940;partial=true
NZ_PYKF01000248.1	Protein Homology	CDS	2658	4160	.	-	0	ID=cds-WP_146712435.1;Parent=gene-C9F04_RS06720;Dbxref=Genbank:WP_146712435.1;Name=WP_146712435.1;Ontology_term=GO:0016491;end_range=4160,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001342405.1;locus_tag=C9F04_RS06720;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146712435.1;transl_table=11
##sequence-region NZ_PYKF01000497.1 1 4150
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000497.1	RefSeq	region	1	4150	.	+	.	ID=NZ_PYKF01000497.1:1..4150;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000497.1	RefSeq	gene	1	836	.	-	.	ID=gene-C9F04_RS14730;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9F04_RS14730;old_locus_tag=C9F04_15215;partial=true;start_range=.,1
NZ_PYKF01000497.1	Protein Homology	CDS	1	836	.	-	0	ID=cds-WP_146712808.1;Parent=gene-C9F04_RS14730;Dbxref=Genbank:WP_146712808.1;Name=WP_146712808.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9F04_RS14730;partial=true;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_146712808.1;start_range=.,1;transl_table=11
NZ_PYKF01000497.1	RefSeq	gene	1053	1367	.	+	.	ID=gene-C9F04_RS14735;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9F04_RS14735;old_locus_tag=C9F04_15220
NZ_PYKF01000497.1	Protein Homology	CDS	1053	1367	.	+	0	ID=cds-WP_000719037.1;Parent=gene-C9F04_RS14735;Dbxref=Genbank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9F04_RS14735;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11
NZ_PYKF01000497.1	RefSeq	gene	1488	1874	.	-	.	ID=gene-C9F04_RS14740;Name=C9F04_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14740;old_locus_tag=C9F04_15225
NZ_PYKF01000497.1	Protein Homology	CDS	1488	1874	.	-	0	ID=cds-WP_001629111.1;Parent=gene-C9F04_RS14740;Dbxref=Genbank:WP_001629111.1;Name=WP_001629111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9F04_RS14740;product=hypothetical protein;protein_id=WP_001629111.1;transl_table=11
NZ_PYKF01000497.1	RefSeq	gene	2139	2372	.	-	.	ID=gene-C9F04_RS14745;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9F04_RS14745;old_locus_tag=C9F04_15230
NZ_PYKF01000497.1	Protein Homology	CDS	2139	2372	.	-	0	ID=cds-WP_000790504.1;Parent=gene-C9F04_RS14745;Dbxref=Genbank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9F04_RS14745;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11
NZ_PYKF01000497.1	RefSeq	gene	2369	3574	.	-	.	ID=gene-C9F04_RS14750;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9F04_RS14750;old_locus_tag=C9F04_15235
NZ_PYKF01000497.1	Protein Homology	CDS	2369	3574	.	-	0	ID=cds-WP_001519382.1;Parent=gene-C9F04_RS14750;Dbxref=Genbank:WP_001519382.1;Name=WP_001519382.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9F04_RS14750;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001519382.1;transl_table=11
NZ_PYKF01000497.1	RefSeq	gene	3760	4150	.	+	.	ID=gene-C9F04_RS14755;Name=C9F04_RS14755;end_range=4150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14755;old_locus_tag=C9F04_15240;partial=true
NZ_PYKF01000497.1	Protein Homology	CDS	3760	4150	.	+	0	ID=cds-WP_146712809.1;Parent=gene-C9F04_RS14755;Dbxref=Genbank:WP_146712809.1;Name=WP_146712809.1;end_range=4150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460917.1;locus_tag=C9F04_RS14755;partial=true;product=lipoprotein;protein_id=WP_146712809.1;transl_table=11
##sequence-region NZ_PYKF01000538.1 1 4130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000538.1	RefSeq	region	1	4130	.	+	.	ID=NZ_PYKF01000538.1:1..4130;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000538.1	RefSeq	gene	24	1526	.	+	.	ID=gene-C9F04_RS16095;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9F04_RS16095;old_locus_tag=C9F04_16595
NZ_PYKF01000538.1	Protein Homology	CDS	24	1526	.	+	0	ID=cds-WP_146712873.1;Parent=gene-C9F04_RS16095;Dbxref=Genbank:WP_146712873.1;Name=WP_146712873.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097187.1;locus_tag=C9F04_RS16095;product=aldehyde dehydrogenase AldB;protein_id=WP_146712873.1;transl_table=11
NZ_PYKF01000538.1	RefSeq	gene	1644	3599	.	-	.	ID=gene-C9F04_RS16100;Name=C9F04_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16100;old_locus_tag=C9F04_16600
NZ_PYKF01000538.1	Protein Homology	CDS	1644	3599	.	-	0	ID=cds-WP_146712874.1;Parent=gene-C9F04_RS16100;Dbxref=Genbank:WP_146712874.1;Name=WP_146712874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9F04_RS16100;product=glycoside hydrolase family 127 protein;protein_id=WP_146712874.1;transl_table=11
NZ_PYKF01000538.1	RefSeq	pseudogene	3863	4084	.	+	.	ID=gene-C9F04_RS16105;Name=C9F04_RS16105;end_range=4084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16105;old_locus_tag=C9F04_16605;partial=true;pseudo=true
NZ_PYKF01000538.1	Protein Homology	CDS	3863	4084	.	+	0	ID=cds-C9F04_RS16105;Parent=gene-C9F04_RS16105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9F04_RS16105;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000827.1 1 4083
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000827.1	RefSeq	region	1	4083	.	+	.	ID=NZ_PYKF01000827.1:1..4083;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000827.1	RefSeq	pseudogene	1	780	.	+	.	ID=gene-C9F04_RS25925;Name=C9F04_RS25925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25925;old_locus_tag=C9F04_26830;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000827.1	Protein Homology	CDS	1	780	.	+	0	ID=cds-C9F04_RS25925;Parent=gene-C9F04_RS25925;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F04_RS25925;partial=true;product=glycogen debranching enzyme;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000827.1	RefSeq	gene	795	2090	.	+	.	ID=gene-C9F04_RS25930;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9F04_RS25930;old_locus_tag=C9F04_26835
NZ_PYKF01000827.1	Protein Homology	CDS	795	2090	.	+	0	ID=cds-WP_000253994.1;Parent=gene-C9F04_RS25930;Dbxref=Genbank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9F04_RS25930;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11
NZ_PYKF01000827.1	RefSeq	gene	2090	3523	.	+	.	ID=gene-C9F04_RS25935;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9F04_RS25935;old_locus_tag=C9F04_26840
NZ_PYKF01000827.1	Protein Homology	CDS	2090	3523	.	+	0	ID=cds-WP_146713372.1;Parent=gene-C9F04_RS25935;Dbxref=Genbank:WP_146713372.1;Name=WP_146713372.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9F04_RS25935;product=glycogen synthase GlgA;protein_id=WP_146713372.1;transl_table=11
NZ_PYKF01000827.1	RefSeq	pseudogene	3543	4064	.	+	.	ID=gene-C9F04_RS25940;Name=C9F04_RS25940;end_range=4064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25940;old_locus_tag=C9F04_26845;partial=true;pseudo=true
NZ_PYKF01000827.1	Protein Homology	CDS	3543	4064	.	+	0	ID=cds-C9F04_RS25940;Parent=gene-C9F04_RS25940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0008184;end_range=4064,.;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9F04_RS25940;partial=true;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000198.1 1 4077
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000198.1	RefSeq	region	1	4077	.	+	.	ID=NZ_PYKF01000198.1:1..4077;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000198.1	RefSeq	pseudogene	72	530	.	-	.	ID=gene-C9F04_RS04650;Name=C9F04_RS04650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04650;old_locus_tag=C9F04_04800;partial=true;pseudo=true;start_range=.,72
NZ_PYKF01000198.1	Protein Homology	CDS	72	530	.	-	0	ID=cds-C9F04_RS04650;Parent=gene-C9F04_RS04650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F04_RS04650;partial=true;product=DUF1338 family protein;pseudo=true;start_range=.,72;transl_table=11
NZ_PYKF01000198.1	RefSeq	gene	823	1746	.	+	.	ID=gene-C9F04_RS04655;Name=C9F04_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04655;old_locus_tag=C9F04_04805
NZ_PYKF01000198.1	Protein Homology	CDS	823	1746	.	+	0	ID=cds-WP_146712348.1;Parent=gene-C9F04_RS04655;Dbxref=Genbank:WP_146712348.1;Name=WP_146712348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9F04_RS04655;product=LysR substrate-binding domain-containing protein;protein_id=WP_146712348.1;transl_table=11
NZ_PYKF01000198.1	RefSeq	gene	1807	3432	.	-	.	ID=gene-C9F04_RS04660;Name=C9F04_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04660;old_locus_tag=C9F04_04810
NZ_PYKF01000198.1	Protein Homology	CDS	1807	3432	.	-	0	ID=cds-WP_146712349.1;Parent=gene-C9F04_RS04660;Dbxref=Genbank:WP_146712349.1;Name=WP_146712349.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F04_RS04660;product=methyl-accepting chemotaxis protein;protein_id=WP_146712349.1;transl_table=11
NZ_PYKF01000198.1	RefSeq	gene	3601	4077	.	-	.	ID=gene-C9F04_RS04665;Name=C9F04_RS04665;end_range=4077,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04665;old_locus_tag=C9F04_04820;partial=true
NZ_PYKF01000198.1	Protein Homology	CDS	3601	4077	.	-	0	ID=cds-WP_261770745.1;Parent=gene-C9F04_RS04665;Dbxref=Genbank:WP_261770745.1;Name=WP_261770745.1;end_range=4077,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495946.1;locus_tag=C9F04_RS04665;partial=true;product=zinc-binding dehydrogenase;protein_id=WP_261770745.1;transl_table=11
##sequence-region NZ_PYKF01000298.1 1 4066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000298.1	RefSeq	region	1	4066	.	+	.	ID=NZ_PYKF01000298.1:1..4066;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000298.1	RefSeq	gene	1	677	.	+	.	ID=gene-C9F04_RS08675;Name=C9F04_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08675;old_locus_tag=C9F04_08960;partial=true;start_range=.,1
NZ_PYKF01000298.1	Protein Homology	CDS	1	677	.	+	2	ID=cds-WP_146712510.1;Parent=gene-C9F04_RS08675;Dbxref=Genbank:WP_146712510.1;Name=WP_146712510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9F04_RS08675;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_146712510.1;start_range=.,1;transl_table=11
NZ_PYKF01000298.1	RefSeq	gene	738	1562	.	-	.	ID=gene-C9F04_RS08680;Name=C9F04_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08680;old_locus_tag=C9F04_08965
NZ_PYKF01000298.1	Protein Homology	CDS	738	1562	.	-	0	ID=cds-WP_001575119.1;Parent=gene-C9F04_RS08680;Dbxref=Genbank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9F04_RS08680;product=protein bax;protein_id=WP_001575119.1;transl_table=11
NZ_PYKF01000298.1	RefSeq	gene	1878	3905	.	+	.	ID=gene-C9F04_RS08685;Name=C9F04_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08685;old_locus_tag=C9F04_08975
NZ_PYKF01000298.1	Protein Homology	CDS	1878	3905	.	+	0	ID=cds-WP_135369442.1;Parent=gene-C9F04_RS08685;Dbxref=Genbank:WP_135369442.1;Name=WP_135369442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F04_RS08685;product=alpha-amylase;protein_id=WP_135369442.1;transl_table=11
##sequence-region NZ_PYKF01000761.1 1 4018
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000761.1	RefSeq	region	1	4018	.	+	.	ID=NZ_PYKF01000761.1:1..4018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000761.1	RefSeq	gene	1	1767	.	+	.	ID=gene-C9F04_RS23685;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9F04_RS23685;old_locus_tag=C9F04_24480;partial=true;start_range=.,1
NZ_PYKF01000761.1	Protein Homology	CDS	1	1767	.	+	0	ID=cds-WP_261771497.1;Parent=gene-C9F04_RS23685;Dbxref=Genbank:WP_261771497.1;Name=WP_261771497.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F04_RS23685;partial=true;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_261771497.1;start_range=.,1;transl_table=11
NZ_PYKF01000761.1	RefSeq	gene	1779	2243	.	+	.	ID=gene-C9F04_RS23690;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9F04_RS23690;old_locus_tag=C9F04_24485
NZ_PYKF01000761.1	Protein Homology	CDS	1779	2243	.	+	0	ID=cds-WP_001020583.1;Parent=gene-C9F04_RS23690;Dbxref=Genbank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9F04_RS23690;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11
NZ_PYKF01000761.1	RefSeq	gene	2321	2515	.	+	.	ID=gene-C9F04_RS23695;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9F04_RS23695;old_locus_tag=C9F04_24490
NZ_PYKF01000761.1	Protein Homology	CDS	2321	2515	.	+	0	ID=cds-WP_001159470.1;Parent=gene-C9F04_RS23695;Dbxref=Genbank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9F04_RS23695;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11
NZ_PYKF01000761.1	RefSeq	gene	2807	4018	.	+	.	ID=gene-C9F04_RS23700;Name=C9F04_RS23700;end_range=4018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23700;old_locus_tag=C9F04_24495;partial=true
NZ_PYKF01000761.1	Protein Homology	CDS	2807	4018	.	+	0	ID=cds-WP_146713266.1;Parent=gene-C9F04_RS23700;Dbxref=Genbank:WP_146713266.1;Name=WP_146713266.1;end_range=4018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9F04_RS23700;partial=true;product=MFS transporter;protein_id=WP_146713266.1;transl_table=11
##sequence-region NZ_PYKF01000258.1 1 18028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000258.1	RefSeq	region	1	18028	.	+	.	ID=NZ_PYKF01000258.1:1..18028;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000258.1	RefSeq	pseudogene	1	449	.	+	.	ID=gene-C9F04_RS07195;Name=C9F04_RS07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07195;old_locus_tag=C9F04_07420;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000258.1	Protein Homology	CDS	1	449	.	+	2	ID=cds-C9F04_RS07195;Parent=gene-C9F04_RS07195;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9F04_RS07195;partial=true;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	609	1103	.	+	.	ID=gene-C9F04_RS07200;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9F04_RS07200;old_locus_tag=C9F04_07425
NZ_PYKF01000258.1	Protein Homology	CDS	609	1103	.	+	0	ID=cds-WP_146712458.1;Parent=gene-C9F04_RS07200;Dbxref=Genbank:WP_146712458.1;Name=WP_146712458.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9F04_RS07200;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_146712458.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	1284	2498	.	+	.	ID=gene-C9F04_RS07205;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9F04_RS07205;old_locus_tag=C9F04_07430
NZ_PYKF01000258.1	Protein Homology	CDS	1284	2498	.	+	0	ID=cds-WP_146712459.1;Parent=gene-C9F04_RS07205;Dbxref=Genbank:WP_146712459.1;Name=WP_146712459.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9F04_RS07205;product=cysteine desulfurase;protein_id=WP_146712459.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	2526	2912	.	+	.	ID=gene-C9F04_RS07210;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9F04_RS07210;old_locus_tag=C9F04_07435
NZ_PYKF01000258.1	Protein Homology	CDS	2526	2912	.	+	0	ID=cds-WP_000331704.1;Parent=gene-C9F04_RS07210;Dbxref=Genbank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9F04_RS07210;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	2941	3264	.	+	.	ID=gene-C9F04_RS07215;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9F04_RS07215;old_locus_tag=C9F04_07440
NZ_PYKF01000258.1	Protein Homology	CDS	2941	3264	.	+	0	ID=cds-WP_000028952.1;Parent=gene-C9F04_RS07215;Dbxref=Genbank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9F04_RS07215;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	3460	3975	.	+	.	ID=gene-C9F04_RS07220;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9F04_RS07220;old_locus_tag=C9F04_07445
NZ_PYKF01000258.1	Protein Homology	CDS	3460	3975	.	+	0	ID=cds-WP_000384398.1;Parent=gene-C9F04_RS07220;Dbxref=Genbank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9F04_RS07220;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	3988	5838	.	+	.	ID=gene-C9F04_RS07225;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F04_RS07225;old_locus_tag=C9F04_07450
NZ_PYKF01000258.1	Protein Homology	CDS	3988	5838	.	+	0	ID=cds-WP_146712460.1;Parent=gene-C9F04_RS07225;Dbxref=Genbank:WP_146712460.1;Name=WP_146712460.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F04_RS07225;product=Fe-S protein assembly chaperone HscA;protein_id=WP_146712460.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	5840	6175	.	+	.	ID=gene-C9F04_RS07230;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9F04_RS07230;old_locus_tag=C9F04_07455
NZ_PYKF01000258.1	Protein Homology	CDS	5840	6175	.	+	0	ID=cds-WP_001124466.1;Parent=gene-C9F04_RS07230;Dbxref=Genbank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9F04_RS07230;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	6187	6387	.	+	.	ID=gene-C9F04_RS07235;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9F04_RS07235;old_locus_tag=C9F04_07460
NZ_PYKF01000258.1	Protein Homology	CDS	6187	6387	.	+	0	ID=cds-WP_000523621.1;Parent=gene-C9F04_RS07235;Dbxref=Genbank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9F04_RS07235;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	6441	7724	.	+	.	ID=gene-C9F04_RS07240;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9F04_RS07240;old_locus_tag=C9F04_07465
NZ_PYKF01000258.1	Protein Homology	CDS	6441	7724	.	+	0	ID=cds-WP_146712461.1;Parent=gene-C9F04_RS07240;Dbxref=Genbank:WP_146712461.1;Name=WP_146712461.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9F04_RS07240;product=aminopeptidase PepB;protein_id=WP_146712461.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	7834	8610	.	+	.	ID=gene-C9F04_RS07245;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9F04_RS07245;old_locus_tag=C9F04_07475
NZ_PYKF01000258.1	Protein Homology	CDS	7834	8610	.	+	0	ID=cds-WP_001522413.1;Parent=gene-C9F04_RS07245;Dbxref=Genbank:WP_001522413.1;Name=WP_001522413.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9F04_RS07245;product=enhanced serine sensitivity protein SseB;protein_id=WP_001522413.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	9179	9847	.	-	.	ID=gene-C9F04_RS07250;Name=C9F04_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07250;old_locus_tag=C9F04_07485
NZ_PYKF01000258.1	Protein Homology	CDS	9179	9847	.	-	0	ID=cds-WP_146712462.1;Parent=gene-C9F04_RS07250;Dbxref=Genbank:WP_146712462.1;Name=WP_146712462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9F04_RS07250;product=DUF5066 family protein;protein_id=WP_146712462.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	9890	10114	.	+	.	ID=gene-C9F04_RS26570;Name=C9F04_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26570
NZ_PYKF01000258.1	Protein Homology	CDS	9890	10114	.	+	0	ID=cds-WP_000851099.1;Parent=gene-C9F04_RS26570;Dbxref=Genbank:WP_000851099.1;Name=WP_000851099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9F04_RS26570;product=hypothetical protein;protein_id=WP_000851099.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	10094	10936	.	-	.	ID=gene-C9F04_RS07255;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F04_RS07255;old_locus_tag=C9F04_07490
NZ_PYKF01000258.1	Protein Homology	CDS	10094	10936	.	-	0	ID=cds-WP_135369304.1;Parent=gene-C9F04_RS07255;Dbxref=Genbank:WP_135369304.1;Name=WP_135369304.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9F04_RS07255;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_135369304.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	11145	16079	.	+	.	ID=gene-C9F04_RS07260;Name=C9F04_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07260;old_locus_tag=C9F04_07495
NZ_PYKF01000258.1	Protein Homology	CDS	11145	16079	.	+	0	ID=cds-WP_146712463.1;Parent=gene-C9F04_RS07260;Dbxref=Genbank:WP_146712463.1;Name=WP_146712463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9F04_RS07260;product=alpha-2-macroglobulin family protein;protein_id=WP_146712463.1;transl_table=11
NZ_PYKF01000258.1	RefSeq	gene	16080	18028	.	+	.	ID=gene-C9F04_RS07265;Name=pbpC;end_range=18028,.;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9F04_RS07265;old_locus_tag=C9F04_07500;partial=true
NZ_PYKF01000258.1	Protein Homology	CDS	16080	18028	.	+	0	ID=cds-WP_146712464.1;Parent=gene-C9F04_RS07265;Dbxref=Genbank:WP_146712464.1;Name=WP_146712464.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;end_range=18028,.;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F04_RS07265;partial=true;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_146712464.1;transl_table=11
##sequence-region NZ_PYKF01000169.1 1 3997
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000169.1	RefSeq	region	1	3997	.	+	.	ID=NZ_PYKF01000169.1:1..3997;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000169.1	RefSeq	pseudogene	40	216	.	-	.	ID=gene-C9F04_RS03600;Name=C9F04_RS03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03600;old_locus_tag=C9F04_03720;partial=true;pseudo=true;start_range=.,40
NZ_PYKF01000169.1	Protein Homology	CDS	40	216	.	-	0	ID=cds-C9F04_RS03600;Parent=gene-C9F04_RS03600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9F04_RS03600;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,40;transl_table=11
NZ_PYKF01000169.1	RefSeq	gene	303	1193	.	-	.	ID=gene-C9F04_RS03605;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9F04_RS03605;old_locus_tag=C9F04_03725
NZ_PYKF01000169.1	Protein Homology	CDS	303	1193	.	-	0	ID=cds-WP_000212199.1;Parent=gene-C9F04_RS03605;Dbxref=Genbank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005887;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9F04_RS03605;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11
NZ_PYKF01000169.1	RefSeq	gene	1193	2152	.	-	.	ID=gene-C9F04_RS03610;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9F04_RS03610;old_locus_tag=C9F04_03730
NZ_PYKF01000169.1	Protein Homology	CDS	1193	2152	.	-	0	ID=cds-WP_000741630.1;Parent=gene-C9F04_RS03610;Dbxref=Genbank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;gene=pstC;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9F04_RS03610;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11
NZ_PYKF01000169.1	RefSeq	gene	2288	3328	.	-	.	ID=gene-C9F04_RS03615;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9F04_RS03615;old_locus_tag=C9F04_03735
NZ_PYKF01000169.1	Protein Homology	CDS	2288	3328	.	-	0	ID=cds-WP_000867131.1;Parent=gene-C9F04_RS03615;Dbxref=Genbank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9F04_RS03615;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11
NZ_PYKF01000169.1	RefSeq	pseudogene	3495	3929	.	-	.	ID=gene-C9F04_RS03620;Name=C9F04_RS03620;end_range=3929,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03620;old_locus_tag=C9F04_03740;partial=true;pseudo=true
NZ_PYKF01000169.1	Protein Homology	CDS	3495	3929	.	-	0	ID=cds-C9F04_RS03620;Parent=gene-C9F04_RS03620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0022877,GO:0016021;end_range=3929,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F04_RS03620;partial=true;product=fructose-specific PTS transporter subunit EIIC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000330.1 1 3963
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000330.1	RefSeq	region	1	3963	.	+	.	ID=NZ_PYKF01000330.1:1..3963;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000330.1	RefSeq	pseudogene	1	505	.	+	.	ID=gene-C9F04_RS09590;Name=C9F04_RS09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09590;old_locus_tag=C9F04_09900;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000330.1	Protein Homology	CDS	1	505	.	+	1	ID=cds-C9F04_RS09590;Parent=gene-C9F04_RS09590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F04_RS09590;partial=true;product=nitrite reductase (NAD(P)H);pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000330.1	RefSeq	gene	502	828	.	+	.	ID=gene-C9F04_RS09595;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9F04_RS09595;old_locus_tag=C9F04_09905
NZ_PYKF01000330.1	Protein Homology	CDS	502	828	.	+	0	ID=cds-WP_146712555.1;Parent=gene-C9F04_RS09595;Dbxref=Genbank:WP_146712555.1;Name=WP_146712555.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9F04_RS09595;product=nitrite reductase small subunit NirD;protein_id=WP_146712555.1;transl_table=11
NZ_PYKF01000330.1	RefSeq	gene	1012	1821	.	+	.	ID=gene-C9F04_RS09600;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9F04_RS09600;old_locus_tag=C9F04_09910
NZ_PYKF01000330.1	Protein Homology	CDS	1012	1821	.	+	0	ID=cds-WP_000493576.1;Parent=gene-C9F04_RS09600;Dbxref=Genbank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=C9F04_RS09600;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11
NZ_PYKF01000330.1	RefSeq	gene	1833	3206	.	+	.	ID=gene-C9F04_RS09605;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9F04_RS09605;old_locus_tag=C9F04_09915
NZ_PYKF01000330.1	Protein Homology	CDS	1833	3206	.	+	0	ID=cds-WP_146712556.1;Parent=gene-C9F04_RS09605;Dbxref=Genbank:WP_146712556.1;Name=WP_146712556.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9F04_RS09605;product=siroheme synthase CysG;protein_id=WP_146712556.1;transl_table=11
NZ_PYKF01000330.1	RefSeq	gene	3535	3963	.	+	.	ID=gene-C9F04_RS09610;Name=C9F04_RS09610;end_range=3963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09610;old_locus_tag=C9F04_09920;partial=true
NZ_PYKF01000330.1	Protein Homology	CDS	3535	3963	.	+	0	ID=cds-WP_146712557.1;Parent=gene-C9F04_RS09610;Dbxref=Genbank:WP_146712557.1;Name=WP_146712557.1;end_range=3963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F04_RS09610;partial=true;product=hypothetical protein;protein_id=WP_146712557.1;transl_table=11
##sequence-region NZ_PYKF01000197.1 1 3961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000197.1	RefSeq	region	1	3961	.	+	.	ID=NZ_PYKF01000197.1:1..3961;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000197.1	RefSeq	gene	233	2530	.	-	.	ID=gene-C9F04_RS04640;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9F04_RS04640;old_locus_tag=C9F04_04790
NZ_PYKF01000197.1	Protein Homology	CDS	233	2530	.	-	0	ID=cds-WP_000871555.1;Parent=gene-C9F04_RS04640;Dbxref=Genbank:WP_000871555.1;Name=WP_000871555.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9F04_RS04640;product=beta-glucosidase BglX;protein_id=WP_000871555.1;transl_table=11
NZ_PYKF01000197.1	RefSeq	gene	2797	3961	.	+	.	ID=gene-C9F04_RS04645;Name=dld;end_range=3961,.;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9F04_RS04645;old_locus_tag=C9F04_04795;partial=true
NZ_PYKF01000197.1	Protein Homology	CDS	2797	3961	.	+	0	ID=cds-WP_146712347.1;Parent=gene-C9F04_RS04645;Dbxref=Genbank:WP_146712347.1;Name=WP_146712347.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;end_range=3961,.;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9F04_RS04645;partial=true;product=D-lactate dehydrogenase;protein_id=WP_146712347.1;transl_table=11
##sequence-region NZ_PYKF01000204.1 1 3960
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000204.1	RefSeq	region	1	3960	.	+	.	ID=NZ_PYKF01000204.1:1..3960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000204.1	RefSeq	gene	1	412	.	+	.	ID=gene-C9F04_RS04820;Name=C9F04_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04820;old_locus_tag=C9F04_04985;partial=true;start_range=.,1
NZ_PYKF01000204.1	Protein Homology	CDS	1	412	.	+	1	ID=cds-WP_146712360.1;Parent=gene-C9F04_RS04820;Dbxref=Genbank:WP_146712360.1;Name=WP_146712360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226024.1;locus_tag=C9F04_RS04820;partial=true;product=head completion/stabilization protein;protein_id=WP_146712360.1;start_range=.,1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	412	615	.	+	.	ID=gene-C9F04_RS04825;Name=C9F04_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04825;old_locus_tag=C9F04_04990
NZ_PYKF01000204.1	Protein Homology	CDS	412	615	.	+	0	ID=cds-WP_000868184.1;Parent=gene-C9F04_RS04825;Dbxref=Genbank:WP_000868184.1;Name=WP_000868184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=C9F04_RS04825;product=tail protein X;protein_id=WP_000868184.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	619	834	.	+	.	ID=gene-C9F04_RS04830;Name=C9F04_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04830;old_locus_tag=C9F04_04995
NZ_PYKF01000204.1	Protein Homology	CDS	619	834	.	+	0	ID=cds-WP_000171565.1;Parent=gene-C9F04_RS04830;Dbxref=Genbank:WP_000171565.1;Name=WP_000171565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=C9F04_RS04830;product=HP1 family phage holin;protein_id=WP_000171565.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	815	1324	.	+	.	ID=gene-C9F04_RS04835;Name=C9F04_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04835;old_locus_tag=C9F04_05000
NZ_PYKF01000204.1	Protein Homology	CDS	815	1324	.	+	0	ID=cds-WP_010835208.1;Parent=gene-C9F04_RS04835;Dbxref=Genbank:WP_010835208.1;Name=WP_010835208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077486.1;locus_tag=C9F04_RS04835;product=lysozyme;protein_id=WP_010835208.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	1329	1706	.	+	.	ID=gene-C9F04_RS04840;Name=C9F04_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04840;old_locus_tag=C9F04_05005
NZ_PYKF01000204.1	Protein Homology	CDS	1329	1706	.	+	0	ID=cds-WP_000731036.1;Parent=gene-C9F04_RS04840;Dbxref=Genbank:WP_000731036.1;Name=WP_000731036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835207.1;locus_tag=C9F04_RS04840;product=DNZ54_00345 family protein;protein_id=WP_000731036.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	1703	2131	.	+	.	ID=gene-C9F04_RS26910;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=C9F04_RS26910;old_locus_tag=C9F04_05010
NZ_PYKF01000204.1	Protein Homology	CDS	1703	2131	.	+	0	ID=cds-WP_167850420.1;Parent=gene-C9F04_RS26910;Dbxref=Genbank:WP_167850420.1;Name=WP_167850420.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341071.1;locus_tag=C9F04_RS26910;product=Rz-like lysis system protein LysB;protein_id=WP_167850420.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	2016	2264	.	+	.	ID=gene-C9F04_RS26755;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9F04_RS26755;old_locus_tag=C9F04_05015
NZ_PYKF01000204.1	Protein Homology	CDS	2016	2264	.	+	0	ID=cds-WP_237141205.1;Parent=gene-C9F04_RS26755;Dbxref=Genbank:WP_237141205.1;Name=WP_237141205.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=C9F04_RS26755;product=Rz1-like lysis system protein LysC;protein_id=WP_237141205.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	2227	2658	.	+	.	ID=gene-C9F04_RS04855;Name=C9F04_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04855;old_locus_tag=C9F04_05020
NZ_PYKF01000204.1	Protein Homology	CDS	2227	2658	.	+	0	ID=cds-WP_080160393.1;Parent=gene-C9F04_RS04855;Dbxref=Genbank:WP_080160393.1;Name=WP_080160393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=C9F04_RS04855;product=phage tail protein;protein_id=WP_080160393.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	2651	3100	.	+	.	ID=gene-C9F04_RS04860;Name=C9F04_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04860;old_locus_tag=C9F04_05025
NZ_PYKF01000204.1	Protein Homology	CDS	2651	3100	.	+	0	ID=cds-WP_080160394.1;Parent=gene-C9F04_RS04860;Dbxref=Genbank:WP_080160394.1;Name=WP_080160394.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554841.1;locus_tag=C9F04_RS04860;product=phage virion morphogenesis protein;protein_id=WP_080160394.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	gene	3102	3797	.	-	.	ID=gene-C9F04_RS04865;Name=C9F04_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04865;old_locus_tag=C9F04_05030
NZ_PYKF01000204.1	Protein Homology	CDS	3102	3797	.	-	0	ID=cds-WP_135420213.1;Parent=gene-C9F04_RS04865;Dbxref=Genbank:WP_135420213.1;Name=WP_135420213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235545.1;locus_tag=C9F04_RS04865;product=DUF6216 family protein;protein_id=WP_135420213.1;transl_table=11
NZ_PYKF01000204.1	RefSeq	pseudogene	3898	3960	.	+	.	ID=gene-C9F04_RS04870;Name=C9F04_RS04870;end_range=3960,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04870;old_locus_tag=C9F04_05035;partial=true;pseudo=true
NZ_PYKF01000204.1	Protein Homology	CDS	3898	3960	.	+	0	ID=cds-C9F04_RS04870;Parent=gene-C9F04_RS04870;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3960,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552634.1;locus_tag=C9F04_RS04870;partial=true;product=phage baseplate protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000028.1 1 3932
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000028.1	RefSeq	region	1	3932	.	+	.	ID=NZ_PYKF01000028.1:1..3932;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000028.1	RefSeq	pseudogene	1	499	.	+	.	ID=gene-C9F04_RS00380;Name=C9F04_RS00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00380;old_locus_tag=C9F04_00410;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000028.1	Protein Homology	CDS	1	499	.	+	1	ID=cds-C9F04_RS00380;Parent=gene-C9F04_RS00380;Note=catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9F04_RS00380;partial=true;product=propionate/acetate kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000028.1	RefSeq	gene	533	2827	.	+	.	ID=gene-C9F04_RS00385;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F04_RS00385;old_locus_tag=C9F04_00415
NZ_PYKF01000028.1	Protein Homology	CDS	533	2827	.	+	0	ID=cds-WP_146712142.1;Parent=gene-C9F04_RS00385;Dbxref=Genbank:WP_146712142.1;Name=WP_146712142.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9F04_RS00385;product=formate C-acetyltransferase;protein_id=WP_146712142.1;transl_table=11
NZ_PYKF01000028.1	RefSeq	gene	2897	3932	.	+	.	ID=gene-C9F04_RS00390;Name=C9F04_RS00390;end_range=3932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00390;old_locus_tag=C9F04_00420;partial=true
NZ_PYKF01000028.1	Protein Homology	CDS	2897	3932	.	+	0	ID=cds-WP_146712143.1;Parent=gene-C9F04_RS00390;Dbxref=Genbank:WP_146712143.1;Name=WP_146712143.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;end_range=3932,.;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626422.1;locus_tag=C9F04_RS00390;partial=true;product=L-serine ammonia-lyase;protein_id=WP_146712143.1;transl_table=11
##sequence-region NZ_PYKF01000691.1 1 3932
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000691.1	RefSeq	region	1	3932	.	+	.	ID=NZ_PYKF01000691.1:1..3932;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000691.1	RefSeq	pseudogene	1	794	.	+	.	ID=gene-C9F04_RS21255;Name=C9F04_RS21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21255;old_locus_tag=C9F04_21945;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000691.1	Protein Homology	CDS	1	794	.	+	2	ID=cds-C9F04_RS21255;Parent=gene-C9F04_RS21255;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9F04_RS21255;partial=true;product=DNA polymerase III subunit gamma/tau;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000691.1	cmsearch	sequence_feature	127	191	.	+	.	ID=id-C9F04_RS21255;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS21255;pseudo=true
NZ_PYKF01000691.1	RefSeq	gene	840	1169	.	+	.	ID=gene-C9F04_RS21260;Name=C9F04_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21260;old_locus_tag=C9F04_21950
NZ_PYKF01000691.1	Protein Homology	CDS	840	1169	.	+	0	ID=cds-WP_146713135.1;Parent=gene-C9F04_RS21260;Dbxref=Genbank:WP_146713135.1;Name=WP_146713135.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9F04_RS21260;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_146713135.1;transl_table=11
NZ_PYKF01000691.1	RefSeq	gene	1169	1774	.	+	.	ID=gene-C9F04_RS21265;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9F04_RS21265;old_locus_tag=C9F04_21955
NZ_PYKF01000691.1	Protein Homology	CDS	1169	1774	.	+	0	ID=cds-WP_001195023.1;Parent=gene-C9F04_RS21265;Dbxref=Genbank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9F04_RS21265;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11
NZ_PYKF01000691.1	RefSeq	gene	1885	3759	.	+	.	ID=gene-C9F04_RS21270;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9F04_RS21270;old_locus_tag=C9F04_21960
NZ_PYKF01000691.1	Protein Homology	CDS	1885	3759	.	+	0	ID=cds-WP_146713136.1;Parent=gene-C9F04_RS21270;Dbxref=Genbank:WP_146713136.1;Name=WP_146713136.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F04_RS21270;product=molecular chaperone HtpG;protein_id=WP_146713136.1;transl_table=11
##sequence-region NZ_PYKF01000747.1 1 3927
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000747.1	RefSeq	region	1	3927	.	+	.	ID=NZ_PYKF01000747.1:1..3927;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000747.1	RefSeq	pseudogene	1	79	.	+	.	ID=gene-C9F04_RS23200;Name=C9F04_RS23200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23200;old_locus_tag=C9F04_23970;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000747.1	Protein Homology	CDS	1	79	.	+	1	ID=cds-C9F04_RS23200;Parent=gene-C9F04_RS23200;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F04_RS23200;partial=true;product=class I and II aminotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000747.1	RefSeq	gene	193	2268	.	-	.	ID=gene-C9F04_RS23205;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9F04_RS23205;old_locus_tag=C9F04_23975
NZ_PYKF01000747.1	Protein Homology	CDS	193	2268	.	-	0	ID=cds-WP_135369538.1;Parent=gene-C9F04_RS23205;Dbxref=Genbank:WP_135369538.1;Name=WP_135369538.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9F04_RS23205;product=glycogen debranching protein GlgX;protein_id=WP_135369538.1;transl_table=11
NZ_PYKF01000747.1	RefSeq	gene	2325	3927	.	-	.	ID=gene-C9F04_RS23210;Name=treY;end_range=3927,.;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9F04_RS23210;old_locus_tag=C9F04_23980;partial=true
NZ_PYKF01000747.1	Protein Homology	CDS	2325	3927	.	-	1	ID=cds-WP_146713244.1;Parent=gene-C9F04_RS23210;Dbxref=Genbank:WP_146713244.1;Name=WP_146713244.1;Ontology_term=GO:0005992,GO:0047470;end_range=3927,.;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F04_RS23210;partial=true;product=malto-oligosyltrehalose synthase;protein_id=WP_146713244.1;transl_table=11
##sequence-region NZ_PYKF01000151.1 1 3924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000151.1	RefSeq	region	1	3924	.	+	.	ID=NZ_PYKF01000151.1:1..3924;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000151.1	RefSeq	gene	1	796	.	-	.	ID=gene-C9F04_RS03165;Name=C9F04_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03165;old_locus_tag=C9F04_03265;partial=true;start_range=.,1
NZ_PYKF01000151.1	Protein Homology	CDS	1	796	.	-	0	ID=cds-WP_146712282.1;Parent=gene-C9F04_RS03165;Dbxref=Genbank:WP_146712282.1;Name=WP_146712282.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9F04_RS03165;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_146712282.1;start_range=.,1;transl_table=11
NZ_PYKF01000151.1	RefSeq	gene	813	1460	.	-	.	ID=gene-C9F04_RS03170;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9F04_RS03170;old_locus_tag=C9F04_03270
NZ_PYKF01000151.1	Protein Homology	CDS	813	1460	.	-	0	ID=cds-WP_000440819.1;Parent=gene-C9F04_RS03170;Dbxref=Genbank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9F04_RS03170;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11
NZ_PYKF01000151.1	RefSeq	gene	2016	3332	.	+	.	ID=gene-C9F04_RS03175;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F04_RS03175;old_locus_tag=C9F04_03275
NZ_PYKF01000151.1	Protein Homology	CDS	2016	3332	.	+	0	ID=cds-WP_000528625.1;Parent=gene-C9F04_RS03175;Dbxref=Genbank:WP_000528625.1;Name=WP_000528625.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9F04_RS03175;product=L-fucose:H+ symporter permease;protein_id=WP_000528625.1;transl_table=11
NZ_PYKF01000151.1	RefSeq	pseudogene	3364	3888	.	+	.	ID=gene-C9F04_RS03180;Name=fucI;end_range=3888,.;gbkey=Gene;gene=fucI;gene_biotype=pseudogene;locus_tag=C9F04_RS03180;old_locus_tag=C9F04_03280;partial=true;pseudo=true
NZ_PYKF01000151.1	Protein Homology	CDS	3364	3888	.	+	0	ID=cds-C9F04_RS03180;Parent=gene-C9F04_RS03180;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3888,.;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9F04_RS03180;partial=true;product=L-fucose isomerase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000264.1 1 3912
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000264.1	RefSeq	region	1	3912	.	+	.	ID=NZ_PYKF01000264.1:1..3912;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000264.1	RefSeq	gene	1	947	.	-	.	ID=gene-C9F04_RS07345;Name=C9F04_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07345;old_locus_tag=C9F04_07590;partial=true;start_range=.,1
NZ_PYKF01000264.1	Protein Homology	CDS	1	947	.	-	0	ID=cds-WP_146712468.1;Parent=gene-C9F04_RS07345;Dbxref=Genbank:WP_146712468.1;Name=WP_146712468.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F04_RS07345;partial=true;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_146712468.1;start_range=.,1;transl_table=11
NZ_PYKF01000264.1	RefSeq	gene	996	1814	.	-	.	ID=gene-C9F04_RS07350;Name=C9F04_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07350;old_locus_tag=C9F04_07595
NZ_PYKF01000264.1	Protein Homology	CDS	996	1814	.	-	0	ID=cds-WP_000166716.1;Parent=gene-C9F04_RS07350;Dbxref=Genbank:WP_000166716.1;Name=WP_000166716.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9F04_RS07350;product=shikimate 5-dehydrogenase;protein_id=WP_000166716.1;transl_table=11
NZ_PYKF01000264.1	RefSeq	gene	1909	3666	.	+	.	ID=gene-C9F04_RS07355;Name=C9F04_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07355;old_locus_tag=C9F04_07600
NZ_PYKF01000264.1	Protein Homology	CDS	1909	3666	.	+	0	ID=cds-WP_000213165.1;Parent=gene-C9F04_RS07355;Dbxref=Genbank:WP_000213165.1;Name=WP_000213165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9F04_RS07355;product=SgrR family transcriptional regulator;protein_id=WP_000213165.1;transl_table=11
NZ_PYKF01000264.1	RefSeq	gene	3817	3912	.	-	.	ID=gene-C9F04_RS26960;Name=C9F04_RS26960;end_range=3912,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26960;partial=true
NZ_PYKF01000264.1	Protein Homology	CDS	3817	3912	.	-	0	ID=cds-WP_261770756.1;Parent=gene-C9F04_RS26960;Dbxref=Genbank:WP_261770756.1;Name=WP_261770756.1;end_range=3912,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F04_RS26960;partial=true;product=hypothetical protein;protein_id=WP_261770756.1;transl_table=11
##sequence-region NZ_PYKF01000195.1 1 3863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000195.1	RefSeq	region	1	3863	.	+	.	ID=NZ_PYKF01000195.1:1..3863;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000195.1	RefSeq	gene	481	945	.	+	.	ID=gene-C9F04_RS04580;Name=C9F04_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04580;old_locus_tag=C9F04_04730
NZ_PYKF01000195.1	Protein Homology	CDS	481	945	.	+	0	ID=cds-WP_000381834.1;Parent=gene-C9F04_RS04580;Dbxref=Genbank:WP_000381834.1;Name=WP_000381834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=C9F04_RS04580;product=hypothetical protein;protein_id=WP_000381834.1;transl_table=11
NZ_PYKF01000195.1	RefSeq	gene	939	1265	.	+	.	ID=gene-C9F04_RS04585;Name=C9F04_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04585;old_locus_tag=C9F04_04735
NZ_PYKF01000195.1	Protein Homology	CDS	939	1265	.	+	0	ID=cds-WP_000228159.1;Parent=gene-C9F04_RS04585;Dbxref=Genbank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=C9F04_RS04585;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11
NZ_PYKF01000195.1	RefSeq	gene	1254	1415	.	-	.	ID=gene-C9F04_RS04590;Name=C9F04_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04590;old_locus_tag=C9F04_04740
NZ_PYKF01000195.1	Protein Homology	CDS	1254	1415	.	-	0	ID=cds-WP_023888257.1;Parent=gene-C9F04_RS04590;Dbxref=Genbank:WP_023888257.1;Name=WP_023888257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9F04_RS04590;product=hypothetical protein;protein_id=WP_023888257.1;transl_table=11
NZ_PYKF01000195.1	RefSeq	gene	1461	2915	.	+	.	ID=gene-C9F04_RS04595;Name=C9F04_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04595;old_locus_tag=C9F04_04745
NZ_PYKF01000195.1	Protein Homology	CDS	1461	2915	.	+	0	ID=cds-WP_146712345.1;Parent=gene-C9F04_RS04595;Dbxref=Genbank:WP_146712345.1;Name=WP_146712345.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9F04_RS04595;product=AMP nucleosidase;protein_id=WP_146712345.1;transl_table=11
NZ_PYKF01000195.1	RefSeq	gene	3441	3614	.	-	.	ID=gene-C9F04_RS26560;Name=C9F04_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26560
NZ_PYKF01000195.1	Protein Homology	CDS	3441	3614	.	-	0	ID=cds-WP_000957535.1;Parent=gene-C9F04_RS26560;Dbxref=Genbank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=C9F04_RS26560;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11
NZ_PYKF01000195.1	RefSeq	pseudogene	3662	3766	.	+	.	ID=gene-C9F04_RS04610;Name=C9F04_RS04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04610;old_locus_tag=C9F04_04755;partial=true;pseudo=true;start_range=.,3662
NZ_PYKF01000195.1	Protein Homology	CDS	3662	3766	.	+	0	ID=cds-C9F04_RS04610;Parent=gene-C9F04_RS04610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F04_RS04610;partial=true;product=DUF520 family protein;pseudo=true;start_range=.,3662;transl_table=11
##sequence-region NZ_PYKF01000369.1 1 18022
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000369.1	RefSeq	region	1	18022	.	+	.	ID=NZ_PYKF01000369.1:1..18022;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000369.1	RefSeq	pseudogene	1	9103	.	+	.	ID=gene-C9F04_RS10790;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=C9F04_RS10790;old_locus_tag=C9F04_11125;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000369.1	Protein Homology	CDS	1	9103	.	+	1	ID=cds-C9F04_RS10790;Parent=gene-C9F04_RS10790;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F04_RS10790;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000369.1	RefSeq	pseudogene	9143	11209	.	+	.	ID=gene-C9F04_RS10795;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=pseudogene;locus_tag=C9F04_RS10795;old_locus_tag=C9F04_11130;pseudo=true
NZ_PYKF01000369.1	Protein Homology	CDS	9143	11209	.	+	0	ID=cds-C9F04_RS10795;Parent=gene-C9F04_RS10795;Note=internal stop;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9F04_RS10795;product=SPI-4 type I secretion system protein SiiF;pseudo=true;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	11487	11768	.	-	.	ID=gene-C9F04_RS10800;Name=C9F04_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10800;old_locus_tag=C9F04_11135
NZ_PYKF01000369.1	Protein Homology	CDS	11487	11768	.	-	0	ID=cds-WP_000719058.1;Parent=gene-C9F04_RS10800;Dbxref=Genbank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9F04_RS10800;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	12330	13931	.	+	.	ID=gene-C9F04_RS10805;Name=C9F04_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10805;old_locus_tag=C9F04_11140
NZ_PYKF01000369.1	Protein Homology	CDS	12330	13931	.	+	0	ID=cds-WP_020437586.1;Parent=gene-C9F04_RS10805;Dbxref=Genbank:WP_020437586.1;Name=WP_020437586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9F04_RS10805;product=EAL domain-containing protein;protein_id=WP_020437586.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	13919	14242	.	-	.	ID=gene-C9F04_RS10810;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9F04_RS10810;old_locus_tag=C9F04_11145
NZ_PYKF01000369.1	Protein Homology	CDS	13919	14242	.	-	0	ID=cds-WP_000019483.1;Parent=gene-C9F04_RS10810;Dbxref=Genbank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9F04_RS10810;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	14329	14787	.	+	.	ID=gene-C9F04_RS10815;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9F04_RS10815;old_locus_tag=C9F04_11150
NZ_PYKF01000369.1	Protein Homology	CDS	14329	14787	.	+	0	ID=cds-WP_000412686.1;Parent=gene-C9F04_RS10815;Dbxref=Genbank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9F04_RS10815;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	15080	15748	.	+	.	ID=gene-C9F04_RS10820;Name=C9F04_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10820;old_locus_tag=C9F04_11155
NZ_PYKF01000369.1	Protein Homology	CDS	15080	15748	.	+	0	ID=cds-WP_135369153.1;Parent=gene-C9F04_RS10820;Dbxref=Genbank:WP_135369153.1;Name=WP_135369153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9F04_RS10820;product=glutathione S-transferase;protein_id=WP_135369153.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	gene	16095	17444	.	+	.	ID=gene-C9F04_RS10825;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=C9F04_RS10825;old_locus_tag=C9F04_11165
NZ_PYKF01000369.1	Protein Homology	CDS	16095	17444	.	+	0	ID=cds-WP_146712623.1;Parent=gene-C9F04_RS10825;Dbxref=Genbank:WP_146712623.1;Name=WP_146712623.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9F04_RS10825;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_146712623.1;transl_table=11
NZ_PYKF01000369.1	RefSeq	pseudogene	17594	17941	.	+	.	ID=gene-C9F04_RS10830;Name=C9F04_RS10830;end_range=17941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10830;old_locus_tag=C9F04_11175;partial=true;pseudo=true
NZ_PYKF01000369.1	Protein Homology	CDS	17594	17941	.	+	0	ID=cds-C9F04_RS10830;Parent=gene-C9F04_RS10830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;end_range=17941,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9F04_RS10830;partial=true;product=cation:proton antiporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000130.1 1 36896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000130.1	RefSeq	region	1	36896	.	+	.	ID=NZ_PYKF01000130.1:1..36896;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000130.1	RefSeq	pseudogene	47	124	.	-	.	ID=gene-C9F04_RS26880;Name=C9F04_RS26880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26880;partial=true;pseudo=true;start_range=.,47
NZ_PYKF01000130.1	Protein Homology	CDS	47	124	.	-	0	ID=cds-C9F04_RS26880;Parent=gene-C9F04_RS26880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9F04_RS26880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,47;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	293	1174	.	+	.	ID=gene-C9F04_RS02485;Name=C9F04_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02485;old_locus_tag=C9F04_02570
NZ_PYKF01000130.1	Protein Homology	CDS	293	1174	.	+	0	ID=cds-WP_146712241.1;Parent=gene-C9F04_RS02485;Dbxref=Genbank:WP_146712241.1;Name=WP_146712241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9F04_RS02485;product=ROK family protein;protein_id=WP_146712241.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	1449	3299	.	-	.	ID=gene-C9F04_RS02490;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9F04_RS02490;old_locus_tag=C9F04_02575
NZ_PYKF01000130.1	Protein Homology	CDS	1449	3299	.	-	0	ID=cds-WP_001608726.1;Parent=gene-C9F04_RS02490;Dbxref=Genbank:WP_001608726.1;Name=WP_001608726.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9F04_RS02490;product=selenocysteine-specific translation elongation factor;protein_id=WP_001608726.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	3296	4687	.	-	.	ID=gene-C9F04_RS02495;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9F04_RS02495;old_locus_tag=C9F04_02580
NZ_PYKF01000130.1	Protein Homology	CDS	3296	4687	.	-	0	ID=cds-WP_146712242.1;Parent=gene-C9F04_RS02495;Dbxref=Genbank:WP_146712242.1;Name=WP_146712242.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9F04_RS02495;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_146712242.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	4786	5394	.	-	.	ID=gene-C9F04_RS02500;Name=C9F04_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02500;old_locus_tag=C9F04_02585
NZ_PYKF01000130.1	Protein Homology	CDS	4786	5394	.	-	0	ID=cds-WP_000766688.1;Parent=gene-C9F04_RS02500;Dbxref=Genbank:WP_000766688.1;Name=WP_000766688.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9F04_RS02500;product=glutathione S-transferase;protein_id=WP_000766688.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	5870	7786	.	+	.	ID=gene-C9F04_RS02505;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9F04_RS02505;old_locus_tag=C9F04_02590
NZ_PYKF01000130.1	Protein Homology	CDS	5870	7786	.	+	0	ID=cds-WP_146712243.1;Parent=gene-C9F04_RS02505;Dbxref=Genbank:WP_146712243.1;Name=WP_146712243.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9F04_RS02505;product=PTS mannitol transporter subunit IICBA;protein_id=WP_146712243.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	8007	9155	.	+	.	ID=gene-C9F04_RS02510;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9F04_RS02510;old_locus_tag=C9F04_02595
NZ_PYKF01000130.1	Protein Homology	CDS	8007	9155	.	+	0	ID=cds-WP_146712244.1;Parent=gene-C9F04_RS02510;Dbxref=Genbank:WP_146712244.1;Name=WP_146712244.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9F04_RS02510;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_146712244.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	9152	9742	.	+	.	ID=gene-C9F04_RS02515;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9F04_RS02515;old_locus_tag=C9F04_02600
NZ_PYKF01000130.1	Protein Homology	CDS	9152	9742	.	+	0	ID=cds-WP_000193201.1;Parent=gene-C9F04_RS02515;Dbxref=Genbank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9F04_RS02515;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	9752	9961	.	-	.	ID=gene-C9F04_RS02520;Name=C9F04_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02520;old_locus_tag=C9F04_02605
NZ_PYKF01000130.1	Protein Homology	CDS	9752	9961	.	-	0	ID=cds-WP_001062558.1;Parent=gene-C9F04_RS02520;Dbxref=Genbank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9F04_RS02520;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	10252	10614	.	+	.	ID=gene-C9F04_RS02525;Name=C9F04_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02525;old_locus_tag=C9F04_02610
NZ_PYKF01000130.1	Protein Homology	CDS	10252	10614	.	+	0	ID=cds-WP_000665687.1;Parent=gene-C9F04_RS02525;Dbxref=Genbank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9F04_RS02525;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	11102	11785	.	+	.	ID=gene-C9F04_RS02530;Name=C9F04_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02530;old_locus_tag=C9F04_02620
NZ_PYKF01000130.1	Protein Homology	CDS	11102	11785	.	+	0	ID=cds-WP_135369059.1;Parent=gene-C9F04_RS02530;Dbxref=Genbank:WP_135369059.1;Name=WP_135369059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9F04_RS02530;product=DUF3251 domain-containing protein;protein_id=WP_135369059.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	11829	15584	.	+	.	ID=gene-C9F04_RS02535;Name=C9F04_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02535;old_locus_tag=C9F04_02625
NZ_PYKF01000130.1	Protein Homology	CDS	11829	15584	.	+	0	ID=cds-WP_146712245.1;Parent=gene-C9F04_RS02535;Dbxref=Genbank:WP_146712245.1;Name=WP_146712245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F04_RS02535;product=YadA-like family protein;protein_id=WP_146712245.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	15883	17538	.	+	.	ID=gene-C9F04_RS02540;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9F04_RS02540;old_locus_tag=C9F04_02630
NZ_PYKF01000130.1	Protein Homology	CDS	15883	17538	.	+	0	ID=cds-WP_135369216.1;Parent=gene-C9F04_RS02540;Dbxref=Genbank:WP_135369216.1;Name=WP_135369216.1;Ontology_term=GO:0015727,GO:0015129,GO:0005887;gbkey=CDS;gene=lldP;go_component=integral component of plasma membrane|0005887||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9F04_RS02540;product=L-lactate permease;protein_id=WP_135369216.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	17535	18311	.	+	.	ID=gene-C9F04_RS02545;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=C9F04_RS02545;old_locus_tag=C9F04_02635
NZ_PYKF01000130.1	Protein Homology	CDS	17535	18311	.	+	0	ID=cds-WP_146712246.1;Parent=gene-C9F04_RS02545;Dbxref=Genbank:WP_146712246.1;Name=WP_146712246.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9F04_RS02545;product=transcriptional regulator LldR;protein_id=WP_146712246.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	18308	19498	.	+	.	ID=gene-C9F04_RS02550;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9F04_RS02550;old_locus_tag=C9F04_02640
NZ_PYKF01000130.1	Protein Homology	CDS	18308	19498	.	+	0	ID=cds-WP_146712247.1;Parent=gene-C9F04_RS02550;Dbxref=Genbank:WP_146712247.1;Name=WP_146712247.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F04_RS02550;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_146712247.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	19563	20036	.	+	.	ID=gene-C9F04_RS02555;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9F04_RS02555;old_locus_tag=C9F04_02645
NZ_PYKF01000130.1	Protein Homology	CDS	19563	20036	.	+	0	ID=cds-WP_000932335.1;Parent=gene-C9F04_RS02555;Dbxref=Genbank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9F04_RS02555;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	20104	21108	.	-	.	ID=gene-C9F04_RS02560;Name=C9F04_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02560;old_locus_tag=C9F04_02650
NZ_PYKF01000130.1	Protein Homology	CDS	20104	21108	.	-	0	ID=cds-WP_186798984.1;Parent=gene-C9F04_RS02560;Dbxref=Genbank:WP_186798984.1;Name=WP_186798984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9F04_RS02560;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_186798984.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	21427	22623	.	+	.	ID=gene-C9F04_RS02565;Name=C9F04_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02565;old_locus_tag=C9F04_02660
NZ_PYKF01000130.1	Protein Homology	CDS	21427	22623	.	+	0	ID=cds-WP_001218249.1;Parent=gene-C9F04_RS02565;Dbxref=Genbank:WP_001218249.1;Name=WP_001218249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9F04_RS02565;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	22697	24007	.	+	.	ID=gene-C9F04_RS02570;Name=C9F04_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02570;old_locus_tag=C9F04_02665
NZ_PYKF01000130.1	Protein Homology	CDS	22697	24007	.	+	0	ID=cds-WP_146712249.1;Parent=gene-C9F04_RS02570;Dbxref=Genbank:WP_146712249.1;Name=WP_146712249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9F04_RS02570;product=MFS transporter;protein_id=WP_146712249.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	24090	24911	.	-	.	ID=gene-C9F04_RS02575;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9F04_RS02575;old_locus_tag=C9F04_02670
NZ_PYKF01000130.1	Protein Homology	CDS	24090	24911	.	-	0	ID=cds-WP_146712250.1;Parent=gene-C9F04_RS02575;Dbxref=Genbank:WP_146712250.1;Name=WP_146712250.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9F04_RS02575;product=serine O-acetyltransferase;protein_id=WP_146712250.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	24989	26008	.	-	.	ID=gene-C9F04_RS02580;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9F04_RS02580;old_locus_tag=C9F04_02675
NZ_PYKF01000130.1	Protein Homology	CDS	24989	26008	.	-	0	ID=cds-WP_001076596.1;Parent=gene-C9F04_RS02580;Dbxref=Genbank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0004367;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9F04_RS02580;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	26008	26475	.	-	.	ID=gene-C9F04_RS02585;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9F04_RS02585;old_locus_tag=C9F04_02680
NZ_PYKF01000130.1	Protein Homology	CDS	26008	26475	.	-	0	ID=cds-WP_000003370.1;Parent=gene-C9F04_RS02585;Dbxref=Genbank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9F04_RS02585;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	26519	26770	.	-	.	ID=gene-C9F04_RS02590;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9F04_RS02590;old_locus_tag=C9F04_02685
NZ_PYKF01000130.1	Protein Homology	CDS	26519	26770	.	-	0	ID=cds-WP_001273795.1;Parent=gene-C9F04_RS02590;Dbxref=Genbank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9F04_RS02590;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	26856	27287	.	-	.	ID=gene-C9F04_RS02595;Name=C9F04_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02595;old_locus_tag=C9F04_02690
NZ_PYKF01000130.1	Protein Homology	CDS	26856	27287	.	-	0	ID=cds-WP_146712251.1;Parent=gene-C9F04_RS02595;Dbxref=Genbank:WP_146712251.1;Name=WP_146712251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9F04_RS02595;product=rhodanese-like domain-containing protein;protein_id=WP_146712251.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	27535	29079	.	+	.	ID=gene-C9F04_RS02600;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9F04_RS02600;old_locus_tag=C9F04_02695
NZ_PYKF01000130.1	Protein Homology	CDS	27535	29079	.	+	0	ID=cds-WP_146712252.1;Parent=gene-C9F04_RS02600;Dbxref=Genbank:WP_146712252.1;Name=WP_146712252.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F04_RS02600;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_146712252.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	29113	30372	.	+	.	ID=gene-C9F04_RS02605;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9F04_RS02605;old_locus_tag=C9F04_02700
NZ_PYKF01000130.1	Protein Homology	CDS	29113	30372	.	+	0	ID=cds-WP_058814511.1;Parent=gene-C9F04_RS02605;Dbxref=Genbank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9F04_RS02605;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	30376	31338	.	+	.	ID=gene-C9F04_RS02610;Name=C9F04_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02610;old_locus_tag=C9F04_02705
NZ_PYKF01000130.1	Protein Homology	CDS	30376	31338	.	+	0	ID=cds-WP_135369215.1;Parent=gene-C9F04_RS02610;Dbxref=Genbank:WP_135369215.1;Name=WP_135369215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9F04_RS02610;product=divergent polysaccharide deacetylase family protein;protein_id=WP_135369215.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	31325	32359	.	-	.	ID=gene-C9F04_RS02615;Name=C9F04_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02615;old_locus_tag=C9F04_02710
NZ_PYKF01000130.1	Protein Homology	CDS	31325	32359	.	-	0	ID=cds-WP_146712253.1;Parent=gene-C9F04_RS02615;Dbxref=Genbank:WP_146712253.1;Name=WP_146712253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9F04_RS02615;product=glycosyltransferase;protein_id=WP_146712253.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	32653	33678	.	-	.	ID=gene-C9F04_RS02620;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9F04_RS02620;old_locus_tag=C9F04_02715
NZ_PYKF01000130.1	Protein Homology	CDS	32653	33678	.	-	0	ID=cds-WP_000645990.1;Parent=gene-C9F04_RS02620;Dbxref=Genbank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9F04_RS02620;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	33688	34884	.	-	.	ID=gene-C9F04_RS02625;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9F04_RS02625;old_locus_tag=C9F04_02720
NZ_PYKF01000130.1	Protein Homology	CDS	33688	34884	.	-	0	ID=cds-WP_001213790.1;Parent=gene-C9F04_RS02625;Dbxref=Genbank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9F04_RS02625;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	gene	35087	36019	.	+	.	ID=gene-C9F04_RS02630;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9F04_RS02630;old_locus_tag=C9F04_02725
NZ_PYKF01000130.1	Protein Homology	CDS	35087	36019	.	+	0	ID=cds-WP_000587771.1;Parent=gene-C9F04_RS02630;Dbxref=Genbank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9F04_RS02630;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11
NZ_PYKF01000130.1	RefSeq	pseudogene	36022	36896	.	+	.	ID=gene-C9F04_RS02635;Name=rfaF;end_range=36896,.;gbkey=Gene;gene=rfaF;gene_biotype=pseudogene;locus_tag=C9F04_RS02635;old_locus_tag=C9F04_02730;partial=true;pseudo=true
NZ_PYKF01000130.1	Protein Homology	CDS	36022	36896	.	+	0	ID=cds-C9F04_RS02635;Parent=gene-C9F04_RS02635;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0009103,GO:0016757;end_range=36896,.;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240290.1;locus_tag=C9F04_RS02635;partial=true;product=ADP-heptose--LPS heptosyltransferase RfaF;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000324.1 1 3862
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000324.1	RefSeq	region	1	3862	.	+	.	ID=NZ_PYKF01000324.1:1..3862;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000324.1	RefSeq	gene	1	1032	.	-	.	ID=gene-C9F04_RS09445;Name=C9F04_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09445;old_locus_tag=C9F04_09750;partial=true;start_range=.,1
NZ_PYKF01000324.1	Protein Homology	CDS	1	1032	.	-	0	ID=cds-WP_146712545.1;Parent=gene-C9F04_RS09445;Dbxref=Genbank:WP_146712545.1;Name=WP_146712545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F04_RS09445;partial=true;product=diol dehydratase reactivase subunit alpha;protein_id=WP_146712545.1;start_range=.,1;transl_table=11
NZ_PYKF01000324.1	RefSeq	gene	1048	1569	.	-	.	ID=gene-C9F04_RS09450;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9F04_RS09450;old_locus_tag=C9F04_09755
NZ_PYKF01000324.1	Protein Homology	CDS	1048	1569	.	-	0	ID=cds-WP_001090600.1;Parent=gene-C9F04_RS09450;Dbxref=Genbank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9F04_RS09450;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11
NZ_PYKF01000324.1	RefSeq	gene	1584	2258	.	-	.	ID=gene-C9F04_RS09455;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9F04_RS09455;old_locus_tag=C9F04_09760
NZ_PYKF01000324.1	Protein Homology	CDS	1584	2258	.	-	0	ID=cds-WP_146712546.1;Parent=gene-C9F04_RS09455;Dbxref=Genbank:WP_146712546.1;Name=WP_146712546.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9F04_RS09455;product=propanediol dehydratase medium subunit PduD;protein_id=WP_146712546.1;transl_table=11
NZ_PYKF01000324.1	RefSeq	gene	2269	3862	.	-	.	ID=gene-C9F04_RS09460;Name=pduC;end_range=3862,.;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9F04_RS09460;old_locus_tag=C9F04_09765;partial=true
NZ_PYKF01000324.1	Protein Homology	CDS	2269	3862	.	-	1	ID=cds-WP_146712547.1;Parent=gene-C9F04_RS09460;Dbxref=Genbank:WP_146712547.1;Name=WP_146712547.1;end_range=3862,.;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158483.1;locus_tag=C9F04_RS09460;partial=true;product=propanediol dehydratase large subunit PduC;protein_id=WP_146712547.1;transl_table=11
##sequence-region NZ_PYKF01000765.1 1 3855
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000765.1	RefSeq	region	1	3855	.	+	.	ID=NZ_PYKF01000765.1:1..3855;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000765.1	RefSeq	gene	1	305	.	-	.	ID=gene-C9F04_RS23805;Name=C9F04_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23805;old_locus_tag=C9F04_24605;partial=true;start_range=.,1
NZ_PYKF01000765.1	Protein Homology	CDS	1	305	.	-	0	ID=cds-WP_186799090.1;Parent=gene-C9F04_RS23805;Dbxref=Genbank:WP_186799090.1;Name=WP_186799090.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9F04_RS23805;partial=true;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_186799090.1;start_range=.,1;transl_table=11
NZ_PYKF01000765.1	RefSeq	gene	513	638	.	+	.	ID=gene-C9F04_RS23810;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9F04_RS23810;old_locus_tag=C9F04_24610
NZ_PYKF01000765.1	Protein Homology	CDS	513	638	.	+	0	ID=cds-WP_001708800.1;Parent=gene-C9F04_RS23810;Dbxref=Genbank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9F04_RS23810;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11
NZ_PYKF01000765.1	RefSeq	gene	936	1151	.	+	.	ID=gene-C9F04_RS23815;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9F04_RS23815;old_locus_tag=C9F04_24615
NZ_PYKF01000765.1	Protein Homology	CDS	936	1151	.	+	0	ID=cds-WP_000217946.1;Parent=gene-C9F04_RS23815;Dbxref=Genbank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9F04_RS23815;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11
NZ_PYKF01000765.1	RefSeq	gene	1240	1680	.	+	.	ID=gene-C9F04_RS23820;Name=C9F04_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23820;old_locus_tag=C9F04_24620
NZ_PYKF01000765.1	Protein Homology	CDS	1240	1680	.	+	0	ID=cds-WP_000214061.1;Parent=gene-C9F04_RS23820;Dbxref=Genbank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9F04_RS23820;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11
NZ_PYKF01000765.1	RefSeq	gene	1757	2338	.	+	.	ID=gene-C9F04_RS23825;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9F04_RS23825;old_locus_tag=C9F04_24625
NZ_PYKF01000765.1	Protein Homology	CDS	1757	2338	.	+	0	ID=cds-WP_000133179.1;Parent=gene-C9F04_RS23825;Dbxref=Genbank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9F04_RS23825;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11
NZ_PYKF01000765.1	RefSeq	gene	2338	2916	.	+	.	ID=gene-C9F04_RS23830;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9F04_RS23830;old_locus_tag=C9F04_24630
NZ_PYKF01000765.1	Protein Homology	CDS	2338	2916	.	+	0	ID=cds-WP_001092597.1;Parent=gene-C9F04_RS23830;Dbxref=Genbank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9F04_RS23830;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11
NZ_PYKF01000765.1	RefSeq	pseudogene	2909	3802	.	+	.	ID=gene-C9F04_RS23835;Name=rsxC;end_range=3802,.;gbkey=Gene;gene=rsxC;gene_biotype=pseudogene;locus_tag=C9F04_RS23835;old_locus_tag=C9F04_24635;partial=true;pseudo=true
NZ_PYKF01000765.1	Protein Homology	CDS	2909	3802	.	+	0	ID=cds-C9F04_RS23835;Parent=gene-C9F04_RS23835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=3802,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F04_RS23835;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000361.1 1 3832
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000361.1	RefSeq	region	1	3832	.	+	.	ID=NZ_PYKF01000361.1:1..3832;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000361.1	RefSeq	pseudogene	28	405	.	-	.	ID=gene-C9F04_RS10620;Name=C9F04_RS10620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10620;old_locus_tag=C9F04_10955;partial=true;pseudo=true;start_range=.,28
NZ_PYKF01000361.1	Protein Homology	CDS	28	405	.	-	0	ID=cds-C9F04_RS10620;Parent=gene-C9F04_RS10620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9F04_RS10620;partial=true;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;start_range=.,28;transl_table=11
NZ_PYKF01000361.1	RefSeq	gene	599	1243	.	-	.	ID=gene-C9F04_RS10625;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9F04_RS10625;old_locus_tag=C9F04_10960
NZ_PYKF01000361.1	Protein Homology	CDS	599	1243	.	-	0	ID=cds-WP_146712612.1;Parent=gene-C9F04_RS10625;Dbxref=Genbank:WP_146712612.1;Name=WP_146712612.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9F04_RS10625;product=protein phosphatase CheZ;protein_id=WP_146712612.1;transl_table=11
NZ_PYKF01000361.1	RefSeq	gene	1254	1643	.	-	.	ID=gene-C9F04_RS10630;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9F04_RS10630;old_locus_tag=C9F04_10965
NZ_PYKF01000361.1	Protein Homology	CDS	1254	1643	.	-	0	ID=cds-WP_000763861.1;Parent=gene-C9F04_RS10630;Dbxref=Genbank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9F04_RS10630;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11
NZ_PYKF01000361.1	RefSeq	gene	1661	2710	.	-	.	ID=gene-C9F04_RS10635;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9F04_RS10635;old_locus_tag=C9F04_10970
NZ_PYKF01000361.1	Protein Homology	CDS	1661	2710	.	-	0	ID=cds-WP_146712610.1;Parent=gene-C9F04_RS10635;Dbxref=Genbank:WP_146712610.1;Name=WP_146712610.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9F04_RS10635;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_146712610.1;transl_table=11
NZ_PYKF01000361.1	RefSeq	gene	2707	3573	.	-	.	ID=gene-C9F04_RS10640;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9F04_RS10640;old_locus_tag=C9F04_10975
NZ_PYKF01000361.1	Protein Homology	CDS	2707	3573	.	-	0	ID=cds-WP_146712611.1;Parent=gene-C9F04_RS10640;Dbxref=Genbank:WP_146712611.1;Name=WP_146712611.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9F04_RS10640;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_146712611.1;transl_table=11
NZ_PYKF01000361.1	RefSeq	gene	3734	3832	.	-	.	ID=gene-C9F04_RS27005;Name=C9F04_RS27005;end_range=3832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27005;partial=true
NZ_PYKF01000361.1	Protein Homology	CDS	3734	3832	.	-	0	ID=cds-WP_261770843.1;Parent=gene-C9F04_RS27005;Dbxref=Genbank:WP_261770843.1;Name=WP_261770843.1;end_range=3832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9F04_RS27005;partial=true;product=hypothetical protein;protein_id=WP_261770843.1;transl_table=11
##sequence-region NZ_PYKF01000417.1 1 3827
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000417.1	RefSeq	region	1	3827	.	+	.	ID=NZ_PYKF01000417.1:1..3827;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000417.1	RefSeq	gene	236	700	.	+	.	ID=gene-C9F04_RS12375;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9F04_RS12375;old_locus_tag=C9F04_12790
NZ_PYKF01000417.1	Protein Homology	CDS	236	700	.	+	0	ID=cds-WP_001009173.1;Parent=gene-C9F04_RS12375;Dbxref=Genbank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9F04_RS12375;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11
NZ_PYKF01000417.1	RefSeq	gene	704	988	.	-	.	ID=gene-C9F04_RS12380;Name=C9F04_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12380;old_locus_tag=C9F04_12795
NZ_PYKF01000417.1	Protein Homology	CDS	704	988	.	-	0	ID=cds-WP_000220578.1;Parent=gene-C9F04_RS12380;Dbxref=Genbank:WP_000220578.1;Name=WP_000220578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9F04_RS12380;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000220578.1;transl_table=11
NZ_PYKF01000417.1	RefSeq	gene	978	1220	.	-	.	ID=gene-C9F04_RS12385;Name=C9F04_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12385;old_locus_tag=C9F04_12800
NZ_PYKF01000417.1	Protein Homology	CDS	978	1220	.	-	0	ID=cds-WP_000212724.1;Parent=gene-C9F04_RS12385;Dbxref=Genbank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9F04_RS12385;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11
NZ_PYKF01000417.1	RefSeq	gene	1298	3211	.	-	.	ID=gene-C9F04_RS12390;Name=C9F04_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12390;old_locus_tag=C9F04_12805
NZ_PYKF01000417.1	Protein Homology	CDS	1298	3211	.	-	0	ID=cds-WP_058108085.1;Parent=gene-C9F04_RS12390;Dbxref=Genbank:WP_058108085.1;Name=WP_058108085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9F04_RS12390;product=BglG family transcription antiterminator;protein_id=WP_058108085.1;transl_table=11
NZ_PYKF01000417.1	RefSeq	gene	3228	3827	.	-	.	ID=gene-C9F04_RS12395;Name=C9F04_RS12395;end_range=3827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12395;old_locus_tag=C9F04_12810;partial=true
NZ_PYKF01000417.1	Protein Homology	CDS	3228	3827	.	-	0	ID=cds-WP_146712692.1;Parent=gene-C9F04_RS12395;Dbxref=Genbank:WP_146712692.1;Name=WP_146712692.1;end_range=3827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9F04_RS12395;partial=true;product=KDGP aldolase;protein_id=WP_146712692.1;transl_table=11
##sequence-region NZ_PYKF01000637.1 1 3797
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000637.1	RefSeq	region	1	3797	.	+	.	ID=NZ_PYKF01000637.1:1..3797;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000637.1	RefSeq	gene	74	592	.	-	.	ID=gene-C9F04_RS19530;Name=C9F04_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19530;old_locus_tag=C9F04_20165
NZ_PYKF01000637.1	Protein Homology	CDS	74	592	.	-	0	ID=cds-WP_010989016.1;Parent=gene-C9F04_RS19530;Dbxref=Genbank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9F04_RS19530;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11
NZ_PYKF01000637.1	RefSeq	gene	642	2135	.	-	.	ID=gene-C9F04_RS19535;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9F04_RS19535;old_locus_tag=C9F04_20170
NZ_PYKF01000637.1	Protein Homology	CDS	642	2135	.	-	0	ID=cds-WP_001048658.1;Parent=gene-C9F04_RS19535;Dbxref=Genbank:WP_001048658.1;Name=WP_001048658.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9F04_RS19535;product=diguanylate cyclase DgcJ;protein_id=WP_001048658.1;transl_table=11
NZ_PYKF01000637.1	RefSeq	gene	2392	2652	.	+	.	ID=gene-C9F04_RS19540;Name=C9F04_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19540;old_locus_tag=C9F04_20175
NZ_PYKF01000637.1	GeneMarkS-2+	CDS	2392	2652	.	+	0	ID=cds-WP_146713048.1;Parent=gene-C9F04_RS19540;Dbxref=Genbank:WP_146713048.1;Name=WP_146713048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS19540;product=hypothetical protein;protein_id=WP_146713048.1;transl_table=11
NZ_PYKF01000637.1	RefSeq	gene	2805	3797	.	-	.	ID=gene-C9F04_RS19545;Name=C9F04_RS19545;end_range=3797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19545;old_locus_tag=C9F04_20180;partial=true
NZ_PYKF01000637.1	Protein Homology	CDS	2805	3797	.	-	0	ID=cds-WP_146713049.1;Parent=gene-C9F04_RS19545;Dbxref=Genbank:WP_146713049.1;Name=WP_146713049.1;end_range=3797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F04_RS19545;partial=true;product=YeaH/YhbH family protein;protein_id=WP_146713049.1;transl_table=11
##sequence-region NZ_PYKF01000666.1 1 3773
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000666.1	RefSeq	region	1	3773	.	+	.	ID=NZ_PYKF01000666.1:1..3773;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000666.1	RefSeq	gene	1	519	.	-	.	ID=gene-C9F04_RS20390;Name=C9F04_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20390;old_locus_tag=C9F04_21055;partial=true;start_range=.,1
NZ_PYKF01000666.1	Protein Homology	CDS	1	519	.	-	0	ID=cds-WP_146713089.1;Parent=gene-C9F04_RS20390;Dbxref=Genbank:WP_146713089.1;Name=WP_146713089.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F04_RS20390;partial=true;product=endonuclease NucS;protein_id=WP_146713089.1;start_range=.,1;transl_table=11
NZ_PYKF01000666.1	RefSeq	gene	655	2508	.	+	.	ID=gene-C9F04_RS20395;Name=C9F04_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20395;old_locus_tag=C9F04_21060
NZ_PYKF01000666.1	Protein Homology	CDS	655	2508	.	+	0	ID=cds-WP_135369728.1;Parent=gene-C9F04_RS20395;Dbxref=Genbank:WP_135369728.1;Name=WP_135369728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9F04_RS20395;product=DUF262 domain-containing protein;protein_id=WP_135369728.1;transl_table=11
NZ_PYKF01000666.1	RefSeq	gene	2553	2873	.	-	.	ID=gene-C9F04_RS20400;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9F04_RS20400;old_locus_tag=C9F04_21065
NZ_PYKF01000666.1	Protein Homology	CDS	2553	2873	.	-	0	ID=cds-WP_135369727.1;Parent=gene-C9F04_RS20400;Dbxref=Genbank:WP_135369727.1;Name=WP_135369727.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210980.1;locus_tag=C9F04_RS20400;product=endoribonuclease SymE;protein_id=WP_135369727.1;transl_table=11
NZ_PYKF01000666.1	RefSeq	gene	3090	3710	.	-	.	ID=gene-C9F04_RS20405;Name=C9F04_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20405;old_locus_tag=C9F04_21070
NZ_PYKF01000666.1	Protein Homology	CDS	3090	3710	.	-	0	ID=cds-WP_261771413.1;Parent=gene-C9F04_RS20405;Dbxref=Genbank:WP_261771413.1;Name=WP_261771413.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=C9F04_RS20405;product=restriction endonuclease subunit S;protein_id=WP_261771413.1;transl_table=11
##sequence-region NZ_PYKF01000083.1 1 3771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000083.1	RefSeq	region	1	3771	.	+	.	ID=NZ_PYKF01000083.1:1..3771;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000083.1	RefSeq	pseudogene	1	296	.	-	.	ID=gene-C9F04_RS01630;Name=C9F04_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01630;old_locus_tag=C9F04_01700;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000083.1	Protein Homology	CDS	1	296	.	-	0	ID=cds-C9F04_RS01630;Parent=gene-C9F04_RS01630;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785625.1;locus_tag=C9F04_RS01630;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000083.1	RefSeq	gene	293	1732	.	-	.	ID=gene-C9F04_RS01635;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9F04_RS01635;old_locus_tag=C9F04_01705
NZ_PYKF01000083.1	Protein Homology	CDS	293	1732	.	-	0	ID=cds-WP_061380583.1;Parent=gene-C9F04_RS01635;Dbxref=Genbank:WP_061380583.1;Name=WP_061380583.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9F04_RS01635;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_061380583.1;transl_table=11
NZ_PYKF01000083.1	RefSeq	gene	1918	3438	.	+	.	ID=gene-C9F04_RS01640;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9F04_RS01640;old_locus_tag=C9F04_01710
NZ_PYKF01000083.1	Protein Homology	CDS	1918	3438	.	+	0	ID=cds-WP_146712202.1;Parent=gene-C9F04_RS01640;Dbxref=Genbank:WP_146712202.1;Name=WP_146712202.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9F04_RS01640;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_146712202.1;transl_table=11
NZ_PYKF01000083.1	RefSeq	pseudogene	3435	3632	.	-	.	ID=gene-C9F04_RS01645;Name=C9F04_RS01645;end_range=3632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01645;old_locus_tag=C9F04_01715;partial=true;pseudo=true
NZ_PYKF01000083.1	Protein Homology	CDS	3435	3632	.	-	0	ID=cds-C9F04_RS01645;Parent=gene-C9F04_RS01645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9F04_RS01645;partial=true;product=CBS domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000083.1	RefSeq	gene	3681	3767	.	+	.	ID=gene-C9F04_RS26540;Name=C9F04_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26540;old_locus_tag=C9F04_01720
NZ_PYKF01000083.1	Protein Homology	CDS	3681	3767	.	+	0	ID=cds-WP_261770731.1;Parent=gene-C9F04_RS26540;Dbxref=Genbank:WP_261770731.1;Name=WP_261770731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012934.2;locus_tag=C9F04_RS26540;product=hypothetical protein;protein_id=WP_261770731.1;transl_table=11
##sequence-region NZ_PYKF01000337.1 1 3754
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000337.1	RefSeq	region	1	3754	.	+	.	ID=NZ_PYKF01000337.1:1..3754;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000337.1	RefSeq	pseudogene	87	1187	.	+	.	ID=gene-C9F04_RS09790;Name=C9F04_RS09790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09790;old_locus_tag=C9F04_10100;partial=true;pseudo=true;start_range=.,87
NZ_PYKF01000337.1	Protein Homology	CDS	87	1187	.	+	0	ID=cds-C9F04_RS09790;Parent=gene-C9F04_RS09790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9F04_RS09790;partial=true;product=response regulator;pseudo=true;start_range=.,87;transl_table=11
NZ_PYKF01000337.1	RefSeq	gene	1414	2067	.	+	.	ID=gene-C9F04_RS09795;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9F04_RS09795;old_locus_tag=C9F04_10105
NZ_PYKF01000337.1	Protein Homology	CDS	1414	2067	.	+	0	ID=cds-WP_000719811.1;Parent=gene-C9F04_RS09795;Dbxref=Genbank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9F04_RS09795;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11
NZ_PYKF01000337.1	RefSeq	gene	2064	2792	.	+	.	ID=gene-C9F04_RS09800;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9F04_RS09800;old_locus_tag=C9F04_10110
NZ_PYKF01000337.1	Protein Homology	CDS	2064	2792	.	+	0	ID=cds-WP_000044651.1;Parent=gene-C9F04_RS09800;Dbxref=Genbank:WP_000044651.1;Name=WP_000044651.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9F04_RS09800;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044651.1;transl_table=11
NZ_PYKF01000337.1	RefSeq	gene	2867	3499	.	-	.	ID=gene-C9F04_RS09805;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9F04_RS09805;old_locus_tag=C9F04_10115
NZ_PYKF01000337.1	Protein Homology	CDS	2867	3499	.	-	0	ID=cds-WP_135369552.1;Parent=gene-C9F04_RS09805;Dbxref=Genbank:WP_135369552.1;Name=WP_135369552.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9F04_RS09805;product=PhoP regulatory network protein YrbL;protein_id=WP_135369552.1;transl_table=11
##sequence-region NZ_PYKF01000057.1 1 3730
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000057.1	RefSeq	region	1	3730	.	+	.	ID=NZ_PYKF01000057.1:1..3730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000057.1	RefSeq	gene	1	1035	.	+	.	ID=gene-C9F04_RS01050;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9F04_RS01050;old_locus_tag=C9F04_01115;partial=true;start_range=.,1
NZ_PYKF01000057.1	Protein Homology	CDS	1	1035	.	+	0	ID=cds-WP_146712175.1;Parent=gene-C9F04_RS01050;Dbxref=Genbank:WP_146712175.1;Name=WP_146712175.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308820.1;locus_tag=C9F04_RS01050;partial=true;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_146712175.1;start_range=.,1;transl_table=11
NZ_PYKF01000057.1	RefSeq	gene	1036	1854	.	-	.	ID=gene-C9F04_RS01055;Name=C9F04_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01055;old_locus_tag=C9F04_01120
NZ_PYKF01000057.1	Protein Homology	CDS	1036	1854	.	-	0	ID=cds-WP_001748281.1;Parent=gene-C9F04_RS01055;Dbxref=Genbank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9F04_RS01055;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11
NZ_PYKF01000057.1	RefSeq	gene	2018	3013	.	+	.	ID=gene-C9F04_RS01060;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=C9F04_RS01060;old_locus_tag=C9F04_01125
NZ_PYKF01000057.1	Protein Homology	CDS	2018	3013	.	+	0	ID=cds-WP_000815468.1;Parent=gene-C9F04_RS01060;Dbxref=Genbank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9F04_RS01060;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11
NZ_PYKF01000057.1	RefSeq	pseudogene	3157	3730	.	-	.	ID=gene-C9F04_RS01065;Name=C9F04_RS01065;end_range=3730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01065;old_locus_tag=C9F04_01130;partial=true;pseudo=true
NZ_PYKF01000057.1	Protein Homology	CDS	3157	3730	.	-	1	ID=cds-C9F04_RS01065;Parent=gene-C9F04_RS01065;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9F04_RS01065;partial=true;product=acyl-CoA thioesterase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000047.1 1 3711
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000047.1	RefSeq	region	1	3711	.	+	.	ID=NZ_PYKF01000047.1:1..3711;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000047.1	RefSeq	gene	1	528	.	+	.	ID=gene-C9F04_RS00855;Name=C9F04_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00855;old_locus_tag=C9F04_00910;partial=true;start_range=.,1
NZ_PYKF01000047.1	Protein Homology	CDS	1	528	.	+	0	ID=cds-WP_073970621.1;Parent=gene-C9F04_RS00855;Dbxref=Genbank:WP_073970621.1;Name=WP_073970621.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460673.1;locus_tag=C9F04_RS00855;partial=true;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_073970621.1;start_range=.,1;transl_table=11
NZ_PYKF01000047.1	RefSeq	gene	939	1913	.	+	.	ID=gene-C9F04_RS00860;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9F04_RS00860;old_locus_tag=C9F04_00915
NZ_PYKF01000047.1	Protein Homology	CDS	939	1913	.	+	0	ID=cds-WP_000776233.1;Parent=gene-C9F04_RS00860;Dbxref=Genbank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9F04_RS00860;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11
NZ_PYKF01000047.1	RefSeq	gene	2194	2334	.	+	.	ID=gene-C9F04_RS00865;Name=C9F04_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00865;old_locus_tag=C9F04_00920
NZ_PYKF01000047.1	Protein Homology	CDS	2194	2334	.	+	0	ID=cds-WP_213083417.1;Parent=gene-C9F04_RS00865;Dbxref=Genbank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9F04_RS00865;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11
NZ_PYKF01000047.1	RefSeq	gene	2335	2505	.	+	.	ID=gene-C9F04_RS00870;Name=C9F04_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00870;old_locus_tag=C9F04_00925
NZ_PYKF01000047.1	Protein Homology	CDS	2335	2505	.	+	0	ID=cds-WP_000029027.1;Parent=gene-C9F04_RS00870;Dbxref=Genbank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=C9F04_RS00870;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11
NZ_PYKF01000047.1	RefSeq	gene	2615	2707	.	+	.	ID=gene-C9F04_RS26850;Name=C9F04_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26850
NZ_PYKF01000047.1	Protein Homology	CDS	2615	2707	.	+	0	ID=cds-WP_223148964.1;Parent=gene-C9F04_RS26850;Dbxref=Genbank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096370.1;locus_tag=C9F04_RS26850;product=hypothetical protein;protein_id=WP_223148964.1;transl_table=11
NZ_PYKF01000047.1	RefSeq	gene	2890	3711	.	+	.	ID=gene-C9F04_RS00875;Name=C9F04_RS00875;end_range=3711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00875;old_locus_tag=C9F04_00930;partial=true
NZ_PYKF01000047.1	Protein Homology	CDS	2890	3711	.	+	0	ID=cds-WP_261770725.1;Parent=gene-C9F04_RS00875;Dbxref=Genbank:WP_261770725.1;Name=WP_261770725.1;end_range=3711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F04_RS00875;partial=true;product=aconitase family protein;protein_id=WP_261770725.1;transl_table=11
##sequence-region NZ_PYKF01000045.1 1 18016
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000045.1	RefSeq	region	1	18016	.	+	.	ID=NZ_PYKF01000045.1:1..18016;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000045.1	RefSeq	pseudogene	38	436	.	-	.	ID=gene-C9F04_RS00730;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=pseudogene;locus_tag=C9F04_RS00730;old_locus_tag=C9F04_00785;partial=true;pseudo=true;start_range=.,38
NZ_PYKF01000045.1	Protein Homology	CDS	38	436	.	-	0	ID=cds-C9F04_RS00730;Parent=gene-C9F04_RS00730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9F04_RS00730;partial=true;product=SPI-1 type III secretion system protein SpaN;pseudo=true;start_range=.,38;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	436	879	.	-	.	ID=gene-C9F04_RS00735;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9F04_RS00735;old_locus_tag=C9F04_00790
NZ_PYKF01000045.1	Protein Homology	CDS	436	879	.	-	0	ID=cds-WP_000555884.1;Parent=gene-C9F04_RS00735;Dbxref=Genbank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9F04_RS00735;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	857	2152	.	-	.	ID=gene-C9F04_RS00740;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9F04_RS00740;old_locus_tag=C9F04_00795
NZ_PYKF01000045.1	Protein Homology	CDS	857	2152	.	-	0	ID=cds-WP_000856766.1;Parent=gene-C9F04_RS00740;Dbxref=Genbank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9F04_RS00740;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	2149	2556	.	-	.	ID=gene-C9F04_RS00745;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9F04_RS00745;old_locus_tag=C9F04_00800
NZ_PYKF01000045.1	Protein Homology	CDS	2149	2556	.	-	0	ID=cds-WP_001164066.1;Parent=gene-C9F04_RS00745;Dbxref=Genbank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9F04_RS00745;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	2580	4637	.	-	.	ID=gene-C9F04_RS00750;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9F04_RS00750;old_locus_tag=C9F04_00805
NZ_PYKF01000045.1	Protein Homology	CDS	2580	4637	.	-	0	ID=cds-WP_146712165.1;Parent=gene-C9F04_RS00750;Dbxref=Genbank:WP_146712165.1;Name=WP_146712165.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9F04_RS00750;product=type III secretion system export apparatus protein InvA;protein_id=WP_146712165.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	4662	5780	.	-	.	ID=gene-C9F04_RS00755;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9F04_RS00755;old_locus_tag=C9F04_00810
NZ_PYKF01000045.1	Protein Homology	CDS	4662	5780	.	-	0	ID=cds-WP_146712166.1;Parent=gene-C9F04_RS00755;Dbxref=Genbank:WP_146712166.1;Name=WP_146712166.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9F04_RS00755;product=type III secretion system gatekeeper InvE;protein_id=WP_146712166.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	5777	7465	.	-	.	ID=gene-C9F04_RS00760;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9F04_RS00760;old_locus_tag=C9F04_00815
NZ_PYKF01000045.1	Protein Homology	CDS	5777	7465	.	-	0	ID=cds-WP_000848102.1;Parent=gene-C9F04_RS00760;Dbxref=Genbank:WP_000848102.1;Name=WP_000848102.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9F04_RS00760;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848102.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	7462	8112	.	-	.	ID=gene-C9F04_RS00765;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9F04_RS00765;old_locus_tag=C9F04_00820
NZ_PYKF01000045.1	Protein Homology	CDS	7462	8112	.	-	0	ID=cds-WP_001674874.1;Parent=gene-C9F04_RS00765;Dbxref=Genbank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9F04_RS00765;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	8569	9012	.	+	.	ID=gene-C9F04_RS00770;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9F04_RS00770;old_locus_tag=C9F04_00825
NZ_PYKF01000045.1	Protein Homology	CDS	8569	9012	.	+	0	ID=cds-WP_000715096.1;Parent=gene-C9F04_RS00770;Dbxref=Genbank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9F04_RS00770;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	pseudogene	9444	9893	.	+	.	ID=gene-C9F04_RS00775;Name=C9F04_RS00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00775;old_locus_tag=C9F04_00830;pseudo=true
NZ_PYKF01000045.1	Protein Homology	CDS	9444	9893	.	+	0	ID=cds-C9F04_RS00775;Parent=gene-C9F04_RS00775;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9F04_RS00775;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	9878	10225	.	+	.	ID=gene-C9F04_RS00780;Name=C9F04_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00780;old_locus_tag=C9F04_00835
NZ_PYKF01000045.1	Protein Homology	CDS	9878	10225	.	+	0	ID=cds-WP_135369355.1;Parent=gene-C9F04_RS00780;Dbxref=Genbank:WP_135369355.1;Name=WP_135369355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9F04_RS00780;product=DUF1493 family protein;protein_id=WP_135369355.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	10498	10824	.	-	.	ID=gene-C9F04_RS00785;Name=C9F04_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00785;old_locus_tag=C9F04_00840
NZ_PYKF01000045.1	Protein Homology	CDS	10498	10824	.	-	0	ID=cds-WP_000393300.1;Parent=gene-C9F04_RS00785;Dbxref=Genbank:WP_000393300.1;Name=WP_000393300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9F04_RS00785;product=hypothetical protein;protein_id=WP_000393300.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	pseudogene	11065	11254	.	+	.	ID=gene-C9F04_RS00790;Name=C9F04_RS00790;end_range=11254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00790;old_locus_tag=C9F04_00845;partial=true;pseudo=true
NZ_PYKF01000045.1	Protein Homology	CDS	11065	11254	.	+	0	ID=cds-C9F04_RS00790;Parent=gene-C9F04_RS00790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9F04_RS00790;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	11524	11814	.	+	.	ID=gene-C9F04_RS00795;Name=C9F04_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00795;old_locus_tag=C9F04_00850
NZ_PYKF01000045.1	Protein Homology	CDS	11524	11814	.	+	0	ID=cds-WP_000855694.1;Parent=gene-C9F04_RS00795;Dbxref=Genbank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9F04_RS00795;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	11811	12338	.	+	.	ID=gene-C9F04_RS00800;Name=C9F04_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00800;old_locus_tag=C9F04_00855
NZ_PYKF01000045.1	Protein Homology	CDS	11811	12338	.	+	0	ID=cds-WP_000971655.1;Parent=gene-C9F04_RS00800;Dbxref=Genbank:WP_000971655.1;Name=WP_000971655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9F04_RS00800;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	pseudogene	12411	12629	.	-	.	ID=gene-C9F04_RS00805;Name=C9F04_RS00805;end_range=12629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00805;old_locus_tag=C9F04_00860;partial=true;pseudo=true
NZ_PYKF01000045.1	Protein Homology	CDS	12411	12629	.	-	0	ID=cds-C9F04_RS00805;Parent=gene-C9F04_RS00805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=C9F04_RS00805;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	12964	13620	.	+	.	ID=gene-C9F04_RS00815;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9F04_RS00815;old_locus_tag=C9F04_00870
NZ_PYKF01000045.1	Protein Homology	CDS	12964	13620	.	+	0	ID=cds-WP_000420451.1;Parent=gene-C9F04_RS00815;Dbxref=Genbank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9F04_RS00815;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	13792	14313	.	-	.	ID=gene-C9F04_RS00820;Name=C9F04_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00820;old_locus_tag=C9F04_00875
NZ_PYKF01000045.1	Protein Homology	CDS	13792	14313	.	-	0	ID=cds-WP_146712167.1;Parent=gene-C9F04_RS00820;Dbxref=Genbank:WP_146712167.1;Name=WP_146712167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9F04_RS00820;product=cytoplasmic protein;protein_id=WP_146712167.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	14471	17038	.	+	.	ID=gene-C9F04_RS00825;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9F04_RS00825;old_locus_tag=C9F04_00880
NZ_PYKF01000045.1	Protein Homology	CDS	14471	17038	.	+	0	ID=cds-WP_001005807.1;Parent=gene-C9F04_RS00825;Dbxref=Genbank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9F04_RS00825;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	gene	17094	17474	.	-	.	ID=gene-C9F04_RS00830;Name=C9F04_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00830;old_locus_tag=C9F04_00885
NZ_PYKF01000045.1	Protein Homology	CDS	17094	17474	.	-	0	ID=cds-WP_001070479.1;Parent=gene-C9F04_RS00830;Dbxref=Genbank:WP_001070479.1;Name=WP_001070479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F04_RS00830;product=DUF4440 domain-containing protein;protein_id=WP_001070479.1;transl_table=11
NZ_PYKF01000045.1	RefSeq	pseudogene	17471	18016	.	-	.	ID=gene-C9F04_RS00835;Name=C9F04_RS00835;end_range=18016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00835;old_locus_tag=C9F04_00890;partial=true;pseudo=true
NZ_PYKF01000045.1	Protein Homology	CDS	17471	18016	.	-	0	ID=cds-C9F04_RS00835;Parent=gene-C9F04_RS00835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=18016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222420.1;locus_tag=C9F04_RS00835;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000782.1 1 3699
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000782.1	RefSeq	region	1	3699	.	+	.	ID=NZ_PYKF01000782.1:1..3699;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000782.1	RefSeq	gene	1	1492	.	+	.	ID=gene-C9F04_RS24425;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9F04_RS24425;old_locus_tag=C9F04_25250;partial=true;start_range=.,1
NZ_PYKF01000782.1	Protein Homology	CDS	1	1492	.	+	1	ID=cds-WP_146713297.1;Parent=gene-C9F04_RS24425;Dbxref=Genbank:WP_146713297.1;Name=WP_146713297.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F04_RS24425;partial=true;product=chemotaxis protein CheA;protein_id=WP_146713297.1;start_range=.,1;transl_table=11
NZ_PYKF01000782.1	RefSeq	gene	1513	2016	.	+	.	ID=gene-C9F04_RS24430;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9F04_RS24430;old_locus_tag=C9F04_25255
NZ_PYKF01000782.1	Protein Homology	CDS	1513	2016	.	+	0	ID=cds-WP_000147295.1;Parent=gene-C9F04_RS24430;Dbxref=Genbank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9F04_RS24430;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11
NZ_PYKF01000782.1	RefSeq	gene	2253	3699	.	+	.	ID=gene-C9F04_RS24435;Name=tar;end_range=3699,.;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9F04_RS24435;old_locus_tag=C9F04_25260;partial=true
NZ_PYKF01000782.1	Protein Homology	CDS	2253	3699	.	+	0	ID=cds-WP_146713298.1;Parent=gene-C9F04_RS24435;Dbxref=Genbank:WP_146713298.1;Name=WP_146713298.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016021;end_range=3699,.;gbkey=CDS;gene=tar;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9F04_RS24435;partial=true;product=methyl-accepting chemotaxis protein II;protein_id=WP_146713298.1;transl_table=11
##sequence-region NZ_PYKF01000261.1 1 3665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000261.1	RefSeq	region	1	3665	.	+	.	ID=NZ_PYKF01000261.1:1..3665;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000261.1	RefSeq	gene	1	891	.	-	.	ID=gene-C9F04_RS07320;Name=C9F04_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07320;old_locus_tag=C9F04_07565;partial=true;start_range=.,1
NZ_PYKF01000261.1	Protein Homology	CDS	1	891	.	-	0	ID=cds-WP_146712467.1;Parent=gene-C9F04_RS07320;Dbxref=Genbank:WP_146712467.1;Name=WP_146712467.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752522.1;locus_tag=C9F04_RS07320;partial=true;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_146712467.1;start_range=.,1;transl_table=11
NZ_PYKF01000261.1	RefSeq	gene	903	1478	.	-	.	ID=gene-C9F04_RS07325;Name=C9F04_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07325;old_locus_tag=C9F04_07570
NZ_PYKF01000261.1	Protein Homology	CDS	903	1478	.	-	0	ID=cds-WP_135369482.1;Parent=gene-C9F04_RS07325;Dbxref=Genbank:WP_135369482.1;Name=WP_135369482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9F04_RS07325;product=YceI family protein;protein_id=WP_135369482.1;transl_table=11
NZ_PYKF01000261.1	RefSeq	gene	1674	3329	.	-	.	ID=gene-C9F04_RS07330;Name=C9F04_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07330;old_locus_tag=C9F04_07575
NZ_PYKF01000261.1	Protein Homology	CDS	1674	3329	.	-	0	ID=cds-WP_135369481.1;Parent=gene-C9F04_RS07330;Dbxref=Genbank:WP_135369481.1;Name=WP_135369481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9F04_RS07330;product=glucan biosynthesis protein;protein_id=WP_135369481.1;transl_table=11
NZ_PYKF01000261.1	RefSeq	gene	3549	3665	.	-	.	ID=gene-C9F04_RS26950;Name=C9F04_RS26950;end_range=3665,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26950;partial=true
NZ_PYKF01000261.1	Protein Homology	CDS	3549	3665	.	-	0	ID=cds-WP_261770754.1;Parent=gene-C9F04_RS26950;Dbxref=Genbank:WP_261770754.1;Name=WP_261770754.1;end_range=3665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F04_RS26950;partial=true;product=hypothetical protein;protein_id=WP_261770754.1;transl_table=11
##sequence-region NZ_PYKF01000824.1 1 3654
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000824.1	RefSeq	region	1	3654	.	+	.	ID=NZ_PYKF01000824.1:1..3654;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000824.1	RefSeq	gene	1	222	.	-	.	ID=gene-C9F04_RS25870;Name=C9F04_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25870;old_locus_tag=C9F04_26765;partial=true;start_range=.,1
NZ_PYKF01000824.1	Protein Homology	CDS	1	222	.	-	0	ID=cds-WP_146713369.1;Parent=gene-C9F04_RS25870;Dbxref=Genbank:WP_146713369.1;Name=WP_146713369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9F04_RS25870;partial=true;product=YcgL domain-containing protein;protein_id=WP_146713369.1;start_range=.,1;transl_table=11
NZ_PYKF01000824.1	RefSeq	gene	348	1055	.	+	.	ID=gene-C9F04_RS25875;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9F04_RS25875;old_locus_tag=C9F04_26770
NZ_PYKF01000824.1	Protein Homology	CDS	348	1055	.	+	0	ID=cds-WP_000072527.1;Parent=gene-C9F04_RS25875;Dbxref=Genbank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9F04_RS25875;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11
NZ_PYKF01000824.1	RefSeq	gene	1079	1891	.	+	.	ID=gene-C9F04_RS25880;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9F04_RS25880;old_locus_tag=C9F04_26775
NZ_PYKF01000824.1	Protein Homology	CDS	1079	1891	.	+	0	ID=cds-WP_000101047.1;Parent=gene-C9F04_RS25880;Dbxref=Genbank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F04_RS25880;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11
NZ_PYKF01000824.1	RefSeq	gene	1895	2161	.	+	.	ID=gene-C9F04_RS25885;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9F04_RS25885;old_locus_tag=C9F04_26780
NZ_PYKF01000824.1	Protein Homology	CDS	1895	2161	.	+	0	ID=cds-WP_001185666.1;Parent=gene-C9F04_RS25885;Dbxref=Genbank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9F04_RS25885;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11
NZ_PYKF01000824.1	RefSeq	gene	2282	3409	.	-	.	ID=gene-C9F04_RS25890;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9F04_RS25890;old_locus_tag=C9F04_26785
NZ_PYKF01000824.1	Protein Homology	CDS	2282	3409	.	-	0	ID=cds-WP_062946333.1;Parent=gene-C9F04_RS25890;Dbxref=Genbank:WP_062946333.1;Name=WP_062946333.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9F04_RS25890;product=ribonuclease D;protein_id=WP_062946333.1;transl_table=11
NZ_PYKF01000824.1	RefSeq	gene	3482	3654	.	-	.	ID=gene-C9F04_RS25895;Name=C9F04_RS25895;end_range=3654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25895;old_locus_tag=C9F04_26790;partial=true
NZ_PYKF01000824.1	Protein Homology	CDS	3482	3654	.	-	2	ID=cds-WP_146713370.1;Parent=gene-C9F04_RS25895;Dbxref=Genbank:WP_146713370.1;Name=WP_146713370.1;end_range=3654,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9F04_RS25895;partial=true;product=hypothetical protein;protein_id=WP_146713370.1;transl_table=11
##sequence-region NZ_PYKF01000222.1 1 3644
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000222.1	RefSeq	region	1	3644	.	+	.	ID=NZ_PYKF01000222.1:1..3644;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000222.1	RefSeq	pseudogene	59	874	.	+	.	ID=gene-C9F04_RS05670;Name=C9F04_RS05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05670;old_locus_tag=C9F04_05850;partial=true;pseudo=true;start_range=.,59
NZ_PYKF01000222.1	Protein Homology	CDS	59	874	.	+	0	ID=cds-C9F04_RS05670;Parent=gene-C9F04_RS05670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9F04_RS05670;partial=true;product=sigma 54-interacting transcriptional regulator;pseudo=true;start_range=.,59;transl_table=11
NZ_PYKF01000222.1	RefSeq	gene	967	1440	.	+	.	ID=gene-C9F04_RS05675;Name=C9F04_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05675;old_locus_tag=C9F04_05855
NZ_PYKF01000222.1	Protein Homology	CDS	967	1440	.	+	0	ID=cds-WP_001044884.1;Parent=gene-C9F04_RS05675;Dbxref=Genbank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9F04_RS05675;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11
NZ_PYKF01000222.1	RefSeq	gene	1479	2474	.	-	.	ID=gene-C9F04_RS05680;Name=C9F04_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05680;old_locus_tag=C9F04_05860
NZ_PYKF01000222.1	Protein Homology	CDS	1479	2474	.	-	0	ID=cds-WP_135369786.1;Parent=gene-C9F04_RS05680;Dbxref=Genbank:WP_135369786.1;Name=WP_135369786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9F04_RS05680;product=sel1 repeat family protein;protein_id=WP_135369786.1;transl_table=11
NZ_PYKF01000222.1	RefSeq	gene	2599	3306	.	+	.	ID=gene-C9F04_RS05685;Name=C9F04_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05685;old_locus_tag=C9F04_05865
NZ_PYKF01000222.1	Protein Homology	CDS	2599	3306	.	+	0	ID=cds-WP_146712396.1;Parent=gene-C9F04_RS05685;Dbxref=Genbank:WP_146712396.1;Name=WP_146712396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9F04_RS05685;product=DUF1266 domain-containing protein;protein_id=WP_146712396.1;transl_table=11
NZ_PYKF01000222.1	RefSeq	pseudogene	3303	3644	.	+	.	ID=gene-C9F04_RS05690;Name=C9F04_RS05690;end_range=3644,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05690;old_locus_tag=C9F04_05870;partial=true;pseudo=true
NZ_PYKF01000222.1	Protein Homology	CDS	3303	3644	.	+	0	ID=cds-C9F04_RS05690;Parent=gene-C9F04_RS05690;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727403.1;locus_tag=C9F04_RS05690;partial=true;product=J domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000626.1 1 3636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000626.1	RefSeq	region	1	3636	.	+	.	ID=NZ_PYKF01000626.1:1..3636;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000626.1	RefSeq	gene	1	677	.	-	.	ID=gene-C9F04_RS18985;Name=C9F04_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18985;old_locus_tag=C9F04_19605;partial=true;start_range=.,1
NZ_PYKF01000626.1	Protein Homology	CDS	1	677	.	-	0	ID=cds-WP_146713016.1;Parent=gene-C9F04_RS18985;Dbxref=Genbank:WP_146713016.1;Name=WP_146713016.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F04_RS18985;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_146713016.1;start_range=.,1;transl_table=11
NZ_PYKF01000626.1	RefSeq	gene	689	976	.	-	.	ID=gene-C9F04_RS18990;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9F04_RS18990;old_locus_tag=C9F04_19610
NZ_PYKF01000626.1	Protein Homology	CDS	689	976	.	-	0	ID=cds-WP_001522340.1;Parent=gene-C9F04_RS18990;Dbxref=Genbank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9F04_RS18990;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11
NZ_PYKF01000626.1	RefSeq	gene	1089	1379	.	-	.	ID=gene-C9F04_RS18995;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9F04_RS18995;old_locus_tag=C9F04_19615
NZ_PYKF01000626.1	Protein Homology	CDS	1089	1379	.	-	0	ID=cds-WP_000387716.1;Parent=gene-C9F04_RS18995;Dbxref=Genbank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9F04_RS18995;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11
NZ_PYKF01000626.1	RefSeq	gene	1420	2436	.	-	.	ID=gene-C9F04_RS19000;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9F04_RS19000;old_locus_tag=C9F04_19620
NZ_PYKF01000626.1	Protein Homology	CDS	1420	2436	.	-	0	ID=cds-WP_000582929.1;Parent=gene-C9F04_RS19000;Dbxref=Genbank:WP_000582929.1;Name=WP_000582929.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9F04_RS19000;product=phosphate acetyltransferase;protein_id=WP_000582929.1;transl_table=11
NZ_PYKF01000626.1	RefSeq	gene	2433	3236	.	-	.	ID=gene-C9F04_RS19005;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9F04_RS19005;old_locus_tag=C9F04_19625
NZ_PYKF01000626.1	Protein Homology	CDS	2433	3236	.	-	0	ID=cds-WP_000997656.1;Parent=gene-C9F04_RS19005;Dbxref=Genbank:WP_000997656.1;Name=WP_000997656.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9F04_RS19005;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997656.1;transl_table=11
NZ_PYKF01000626.1	RefSeq	gene	3233	3636	.	-	.	ID=gene-C9F04_RS19010;Name=eutQ;end_range=3636,.;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9F04_RS19010;old_locus_tag=C9F04_19630;partial=true
NZ_PYKF01000626.1	Protein Homology	CDS	3233	3636	.	-	2	ID=cds-WP_146713017.1;Parent=gene-C9F04_RS19010;Dbxref=Genbank:WP_146713017.1;Name=WP_146713017.1;end_range=3636,.;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9F04_RS19010;partial=true;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_146713017.1;transl_table=11
##sequence-region NZ_PYKF01000118.1 1 3594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000118.1	RefSeq	region	1	3594	.	+	.	ID=NZ_PYKF01000118.1:1..3594;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000118.1	RefSeq	gene	1	298	.	+	.	ID=gene-C9F04_RS02265;Name=C9F04_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02265;old_locus_tag=C9F04_02345;partial=true;start_range=.,1
NZ_PYKF01000118.1	Protein Homology	CDS	1	298	.	+	1	ID=cds-WP_261770738.1;Parent=gene-C9F04_RS02265;Dbxref=Genbank:WP_261770738.1;Name=WP_261770738.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F04_RS02265;partial=true;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_261770738.1;start_range=.,1;transl_table=11
NZ_PYKF01000118.1	RefSeq	gene	285	1772	.	+	.	ID=gene-C9F04_RS02270;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9F04_RS02270;old_locus_tag=C9F04_02350
NZ_PYKF01000118.1	Protein Homology	CDS	285	1772	.	+	0	ID=cds-WP_080214024.1;Parent=gene-C9F04_RS02270;Dbxref=Genbank:WP_080214024.1;Name=WP_080214024.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9F04_RS02270;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080214024.1;transl_table=11
NZ_PYKF01000118.1	RefSeq	gene	1769	3127	.	+	.	ID=gene-C9F04_RS02275;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9F04_RS02275;old_locus_tag=C9F04_02355
NZ_PYKF01000118.1	Protein Homology	CDS	1769	3127	.	+	0	ID=cds-WP_000626637.1;Parent=gene-C9F04_RS02275;Dbxref=Genbank:WP_000626637.1;Name=WP_000626637.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9F04_RS02275;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626637.1;transl_table=11
NZ_PYKF01000118.1	RefSeq	pseudogene	3121	3594	.	+	.	ID=gene-C9F04_RS02280;Name=mraY;end_range=3594,.;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F04_RS02280;old_locus_tag=C9F04_02360;partial=true;pseudo=true
NZ_PYKF01000118.1	Protein Homology	CDS	3121	3594	.	+	0	ID=cds-C9F04_RS02280;Parent=gene-C9F04_RS02280;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3594,.;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F04_RS02280;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000502.1 1 3587
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000502.1	RefSeq	region	1	3587	.	+	.	ID=NZ_PYKF01000502.1:1..3587;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000502.1	RefSeq	gene	106	2034	.	+	.	ID=gene-C9F04_RS15035;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9F04_RS15035;old_locus_tag=C9F04_15515
NZ_PYKF01000502.1	Protein Homology	CDS	106	2034	.	+	0	ID=cds-WP_001144226.1;Parent=gene-C9F04_RS15035;Dbxref=Genbank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9F04_RS15035;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11
NZ_PYKF01000502.1	RefSeq	gene	2038	2580	.	+	.	ID=gene-C9F04_RS15040;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9F04_RS15040;old_locus_tag=C9F04_15520
NZ_PYKF01000502.1	Protein Homology	CDS	2038	2580	.	+	0	ID=cds-WP_001574431.1;Parent=gene-C9F04_RS15040;Dbxref=Genbank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9F04_RS15040;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11
NZ_PYKF01000502.1	RefSeq	gene	2676	2873	.	+	.	ID=gene-C9F04_RS15045;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9F04_RS15045;old_locus_tag=C9F04_15525
NZ_PYKF01000502.1	Protein Homology	CDS	2676	2873	.	+	0	ID=cds-WP_001124225.1;Parent=gene-C9F04_RS15045;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9F04_RS15045;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_PYKF01000502.1	RefSeq	gene	2924	3280	.	+	.	ID=gene-C9F04_RS15050;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9F04_RS15050;old_locus_tag=C9F04_15530
NZ_PYKF01000502.1	Protein Homology	CDS	2924	3280	.	+	0	ID=cds-WP_000124850.1;Parent=gene-C9F04_RS15050;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9F04_RS15050;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_PYKF01000502.1	cmsearch	sequence_feature	3396	3519	.	+	.	ID=id-NZ_PYKF01000502.1:3396..3519;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
NZ_PYKF01000502.1	RefSeq	gene	3401	3466	.	+	.	ID=gene-C9F04_RS15055;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9F04_RS15055;old_locus_tag=C9F04_15535
NZ_PYKF01000502.1	Protein Homology	CDS	3401	3466	.	+	0	ID=cds-WP_146712819.1;Parent=gene-C9F04_RS15055;Dbxref=Genbank:WP_146712819.1;Name=WP_146712819.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9F04_RS15055;product=pheST operon leader peptide PheM;protein_id=WP_146712819.1;transl_table=11
##sequence-region NZ_PYKF01000288.1 1 3566
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000288.1	RefSeq	region	1	3566	.	+	.	ID=NZ_PYKF01000288.1:1..3566;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000288.1	RefSeq	gene	1	743	.	-	.	ID=gene-C9F04_RS08365;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9F04_RS08365;old_locus_tag=C9F04_08640;partial=true;start_range=.,1
NZ_PYKF01000288.1	Protein Homology	CDS	1	743	.	-	0	ID=cds-WP_146712498.1;Parent=gene-C9F04_RS08365;Dbxref=Genbank:WP_146712498.1;Name=WP_146712498.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9F04_RS08365;partial=true;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_146712498.1;start_range=.,1;transl_table=11
NZ_PYKF01000288.1	RefSeq	gene	736	1434	.	-	.	ID=gene-C9F04_RS08370;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9F04_RS08370;old_locus_tag=C9F04_08645
NZ_PYKF01000288.1	Protein Homology	CDS	736	1434	.	-	0	ID=cds-WP_000689822.1;Parent=gene-C9F04_RS08370;Dbxref=Genbank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9F04_RS08370;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11
NZ_PYKF01000288.1	RefSeq	gene	1519	3036	.	+	.	ID=gene-C9F04_RS08375;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9F04_RS08375;old_locus_tag=C9F04_08650
NZ_PYKF01000288.1	Protein Homology	CDS	1519	3036	.	+	0	ID=cds-WP_000146455.1;Parent=gene-C9F04_RS08375;Dbxref=Genbank:WP_000146455.1;Name=WP_000146455.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9F04_RS08375;product=dGTPase;protein_id=WP_000146455.1;transl_table=11
NZ_PYKF01000288.1	RefSeq	pseudogene	3166	3566	.	+	.	ID=gene-C9F04_RS08380;Name=C9F04_RS08380;end_range=3566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08380;old_locus_tag=C9F04_08655;partial=true;pseudo=true
NZ_PYKF01000288.1	Protein Homology	CDS	3166	3566	.	+	0	ID=cds-C9F04_RS08380;Parent=gene-C9F04_RS08380;Note=protease Do%3B required at high temperature%3B degrades damaged proteins%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9F04_RS08380;partial=true;product=serine endoprotease;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000623.1 1 3557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000623.1	RefSeq	region	1	3557	.	+	.	ID=NZ_PYKF01000623.1:1..3557;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000623.1	RefSeq	gene	1	627	.	+	.	ID=gene-C9F04_RS18875;Name=C9F04_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18875;old_locus_tag=C9F04_19490;partial=true;start_range=.,1
NZ_PYKF01000623.1	Protein Homology	CDS	1	627	.	+	0	ID=cds-WP_261771370.1;Parent=gene-C9F04_RS18875;Dbxref=Genbank:WP_261771370.1;Name=WP_261771370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9F04_RS18875;partial=true;product=PLP-dependent aminotransferase family protein;protein_id=WP_261771370.1;start_range=.,1;transl_table=11
NZ_PYKF01000623.1	RefSeq	gene	742	2187	.	+	.	ID=gene-C9F04_RS18880;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9F04_RS18880;old_locus_tag=C9F04_19495
NZ_PYKF01000623.1	Protein Homology	CDS	742	2187	.	+	0	ID=cds-WP_135369596.1;Parent=gene-C9F04_RS18880;Dbxref=Genbank:WP_135369596.1;Name=WP_135369596.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9F04_RS18880;product=aminobutyraldehyde dehydrogenase;protein_id=WP_135369596.1;transl_table=11
NZ_PYKF01000623.1	RefSeq	gene	2292	2387	.	-	.	ID=gene-C9F04_RS18885;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9F04_RS18885;old_locus_tag=C9F04_19500
NZ_PYKF01000623.1	Protein Homology	CDS	2292	2387	.	-	0	ID=cds-WP_001103198.1;Parent=gene-C9F04_RS18885;Dbxref=Genbank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9F04_RS18885;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11
NZ_PYKF01000623.1	RefSeq	gene	2586	2759	.	+	.	ID=gene-C9F04_RS18890;Name=C9F04_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18890;old_locus_tag=C9F04_19505
NZ_PYKF01000623.1	Protein Homology	CDS	2586	2759	.	+	0	ID=cds-WP_000171943.1;Parent=gene-C9F04_RS18890;Dbxref=Genbank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9F04_RS18890;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11
NZ_PYKF01000623.1	RefSeq	pseudogene	2804	3557	.	-	.	ID=gene-C9F04_RS18895;Name=srfC;end_range=3557,.;gbkey=Gene;gene=srfC;gene_biotype=pseudogene;locus_tag=C9F04_RS18895;old_locus_tag=C9F04_19510;partial=true;pseudo=true
NZ_PYKF01000623.1	Protein Homology	CDS	2804	3557	.	-	1	ID=cds-C9F04_RS18895;Parent=gene-C9F04_RS18895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3557,.;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9F04_RS18895;partial=true;product=virulence-associated effector SrfC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000608.1 1 3556
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000608.1	RefSeq	region	1	3556	.	+	.	ID=NZ_PYKF01000608.1:1..3556;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000608.1	RefSeq	gene	1	290	.	+	.	ID=gene-C9F04_RS18265;Name=C9F04_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18265;old_locus_tag=C9F04_18860;partial=true;start_range=.,1
NZ_PYKF01000608.1	Protein Homology	CDS	1	290	.	+	2	ID=cds-WP_146712985.1;Parent=gene-C9F04_RS18265;Dbxref=Genbank:WP_146712985.1;Name=WP_146712985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9F04_RS18265;partial=true;product=hypothetical protein;protein_id=WP_146712985.1;start_range=.,1;transl_table=11
NZ_PYKF01000608.1	RefSeq	gene	636	1355	.	+	.	ID=gene-C9F04_RS18270;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9F04_RS18270;old_locus_tag=C9F04_18865
NZ_PYKF01000608.1	Protein Homology	CDS	636	1355	.	+	0	ID=cds-WP_000787603.1;Parent=gene-C9F04_RS18270;Dbxref=Genbank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9F04_RS18270;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11
NZ_PYKF01000608.1	RefSeq	gene	1359	1574	.	-	.	ID=gene-C9F04_RS18275;Name=C9F04_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18275;old_locus_tag=C9F04_18870
NZ_PYKF01000608.1	Protein Homology	CDS	1359	1574	.	-	0	ID=cds-WP_135369203.1;Parent=gene-C9F04_RS18275;Dbxref=Genbank:WP_135369203.1;Name=WP_135369203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9F04_RS18275;product=hypothetical protein;protein_id=WP_135369203.1;transl_table=11
NZ_PYKF01000608.1	RefSeq	gene	1694	2641	.	-	.	ID=gene-C9F04_RS18280;Name=C9F04_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18280;old_locus_tag=C9F04_18875
NZ_PYKF01000608.1	Protein Homology	CDS	1694	2641	.	-	0	ID=cds-WP_000970302.1;Parent=gene-C9F04_RS18280;Dbxref=Genbank:WP_000970302.1;Name=WP_000970302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9F04_RS18280;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11
NZ_PYKF01000608.1	RefSeq	pseudogene	3135	3375	.	-	.	ID=gene-C9F04_RS18285;Name=C9F04_RS18285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18285;old_locus_tag=C9F04_18880;pseudo=true
NZ_PYKF01000608.1	Protein Homology	CDS	3135	3375	.	-	0	ID=cds-C9F04_RS18285;Parent=gene-C9F04_RS18285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9F04_RS18285;product=PerC family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000507.1 1 17828
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000507.1	RefSeq	region	1	17828	.	+	.	ID=NZ_PYKF01000507.1:1..17828;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000507.1	RefSeq	pseudogene	1	795	.	-	.	ID=gene-C9F04_RS15140;Name=C9F04_RS15140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15140;old_locus_tag=C9F04_15625;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000507.1	Protein Homology	CDS	1	795	.	-	0	ID=cds-C9F04_RS15140;Parent=gene-C9F04_RS15140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9F04_RS15140;partial=true;product=transcription-repair coupling factor;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	1133	2332	.	+	.	ID=gene-C9F04_RS15145;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9F04_RS15145;old_locus_tag=C9F04_15630
NZ_PYKF01000507.1	Protein Homology	CDS	1133	2332	.	+	0	ID=cds-WP_001518787.1;Parent=gene-C9F04_RS15145;Dbxref=Genbank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016021;gbkey=CDS;gene=lolC;go_component=integral component of membrane|0016021||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9F04_RS15145;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	2325	3026	.	+	.	ID=gene-C9F04_RS15150;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9F04_RS15150;old_locus_tag=C9F04_15635
NZ_PYKF01000507.1	Protein Homology	CDS	2325	3026	.	+	0	ID=cds-WP_001033714.1;Parent=gene-C9F04_RS15150;Dbxref=Genbank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9F04_RS15150;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	3026	4270	.	+	.	ID=gene-C9F04_RS15155;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9F04_RS15155;old_locus_tag=C9F04_15640
NZ_PYKF01000507.1	Protein Homology	CDS	3026	4270	.	+	0	ID=cds-WP_000168091.1;Parent=gene-C9F04_RS15155;Dbxref=Genbank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9F04_RS15155;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	4299	5210	.	+	.	ID=gene-C9F04_RS15160;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9F04_RS15160;old_locus_tag=C9F04_15645
NZ_PYKF01000507.1	Protein Homology	CDS	4299	5210	.	+	0	ID=cds-WP_000291338.1;Parent=gene-C9F04_RS15160;Dbxref=Genbank:WP_000291338.1;Name=WP_000291338.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9F04_RS15160;product=N-acetylglucosamine kinase;protein_id=WP_000291338.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	5229	6050	.	+	.	ID=gene-C9F04_RS15165;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9F04_RS15165;old_locus_tag=C9F04_15650
NZ_PYKF01000507.1	Protein Homology	CDS	5229	6050	.	+	0	ID=cds-WP_001191856.1;Parent=gene-C9F04_RS15165;Dbxref=Genbank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F04_RS15165;product=NAD-dependent protein deacylase;protein_id=WP_001191856.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	6132	7178	.	-	.	ID=gene-C9F04_RS15170;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9F04_RS15170;old_locus_tag=C9F04_15655
NZ_PYKF01000507.1	Protein Homology	CDS	6132	7178	.	-	0	ID=cds-WP_000759329.1;Parent=gene-C9F04_RS15170;Dbxref=Genbank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9F04_RS15170;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	7203	7982	.	-	.	ID=gene-C9F04_RS15175;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9F04_RS15175;old_locus_tag=C9F04_15660
NZ_PYKF01000507.1	Protein Homology	CDS	7203	7982	.	-	0	ID=cds-WP_000580299.1;Parent=gene-C9F04_RS15175;Dbxref=Genbank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9F04_RS15175;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	8298	9308	.	-	.	ID=gene-C9F04_RS15180;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9F04_RS15180;old_locus_tag=C9F04_15665
NZ_PYKF01000507.1	Protein Homology	CDS	8298	9308	.	-	0	ID=cds-WP_135369292.1;Parent=gene-C9F04_RS15180;Dbxref=Genbank:WP_135369292.1;Name=WP_135369292.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9F04_RS15180;product=SPI-2 type III secretion system effector SifA;protein_id=WP_135369292.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	9637	10500	.	-	.	ID=gene-C9F04_RS15185;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9F04_RS15185;old_locus_tag=C9F04_15670
NZ_PYKF01000507.1	Protein Homology	CDS	9637	10500	.	-	0	ID=cds-WP_146712823.1;Parent=gene-C9F04_RS15185;Dbxref=Genbank:WP_146712823.1;Name=WP_146712823.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9F04_RS15185;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_146712823.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	10484	11620	.	-	.	ID=gene-C9F04_RS15190;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9F04_RS15190;old_locus_tag=C9F04_15675
NZ_PYKF01000507.1	Protein Homology	CDS	10484	11620	.	-	0	ID=cds-WP_146712824.1;Parent=gene-C9F04_RS15190;Dbxref=Genbank:WP_146712824.1;Name=WP_146712824.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9F04_RS15190;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_146712824.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	11871	13100	.	+	.	ID=gene-C9F04_RS15195;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9F04_RS15195;old_locus_tag=C9F04_15680
NZ_PYKF01000507.1	Protein Homology	CDS	11871	13100	.	+	0	ID=cds-WP_146712825.1;Parent=gene-C9F04_RS15195;Dbxref=Genbank:WP_146712825.1;Name=WP_146712825.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9F04_RS15195;product=peptidase T;protein_id=WP_146712825.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	13104	14438	.	+	.	ID=gene-C9F04_RS15200;Name=C9F04_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15200;old_locus_tag=C9F04_15685
NZ_PYKF01000507.1	Protein Homology	CDS	13104	14438	.	+	0	ID=cds-WP_135369293.1;Parent=gene-C9F04_RS15200;Dbxref=Genbank:WP_135369293.1;Name=WP_135369293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9F04_RS15200;product=hypothetical protein;protein_id=WP_135369293.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	14478	15599	.	-	.	ID=gene-C9F04_RS15205;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9F04_RS15205;old_locus_tag=C9F04_15690
NZ_PYKF01000507.1	Protein Homology	CDS	14478	15599	.	-	0	ID=cds-WP_000456527.1;Parent=gene-C9F04_RS15205;Dbxref=Genbank:WP_000456527.1;Name=WP_000456527.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9F04_RS15205;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456527.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	15680	17143	.	-	.	ID=gene-C9F04_RS15210;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9F04_RS15210;old_locus_tag=C9F04_15695
NZ_PYKF01000507.1	Protein Homology	CDS	15680	17143	.	-	0	ID=cds-WP_146712826.1;Parent=gene-C9F04_RS15210;Dbxref=Genbank:WP_146712826.1;Name=WP_146712826.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9F04_RS15210;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_146712826.1;transl_table=11
NZ_PYKF01000507.1	RefSeq	gene	17143	17805	.	-	.	ID=gene-C9F04_RS15215;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9F04_RS15215;old_locus_tag=C9F04_15700
NZ_PYKF01000507.1	Protein Homology	CDS	17143	17805	.	-	0	ID=cds-WP_146712827.1;Parent=gene-C9F04_RS15215;Dbxref=Genbank:WP_146712827.1;Name=WP_146712827.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964830.1;locus_tag=C9F04_RS15215;product=two-component system response regulator PhoP;protein_id=WP_146712827.1;transl_table=11
##sequence-region NZ_PYKF01000365.1 1 3554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000365.1	RefSeq	region	1	3554	.	+	.	ID=NZ_PYKF01000365.1:1..3554;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000365.1	RefSeq	pseudogene	27	164	.	-	.	ID=gene-C9F04_RS10715;Name=C9F04_RS10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10715;old_locus_tag=C9F04_11050;partial=true;pseudo=true;start_range=.,27
NZ_PYKF01000365.1	Protein Homology	CDS	27	164	.	-	0	ID=cds-C9F04_RS10715;Parent=gene-C9F04_RS10715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006525,GO:0009015;gbkey=CDS;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9F04_RS10715;partial=true;product=N-succinylarginine dihydrolase;pseudo=true;start_range=.,27;transl_table=11
NZ_PYKF01000365.1	RefSeq	gene	161	1639	.	-	.	ID=gene-C9F04_RS10720;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9F04_RS10720;old_locus_tag=C9F04_11055
NZ_PYKF01000365.1	Protein Homology	CDS	161	1639	.	-	0	ID=cds-WP_146712618.1;Parent=gene-C9F04_RS10720;Dbxref=Genbank:WP_146712618.1;Name=WP_146712618.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9F04_RS10720;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_146712618.1;transl_table=11
NZ_PYKF01000365.1	RefSeq	gene	1636	2670	.	-	.	ID=gene-C9F04_RS10725;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9F04_RS10725;old_locus_tag=C9F04_11060
NZ_PYKF01000365.1	Protein Homology	CDS	1636	2670	.	-	0	ID=cds-WP_001263889.1;Parent=gene-C9F04_RS10725;Dbxref=Genbank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F04_RS10725;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11
NZ_PYKF01000365.1	RefSeq	gene	2661	3554	.	-	.	ID=gene-C9F04_RS10730;Name=C9F04_RS10730;end_range=3554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10730;old_locus_tag=C9F04_11065;partial=true
NZ_PYKF01000365.1	Protein Homology	CDS	2661	3554	.	-	0	ID=cds-WP_146712619.1;Parent=gene-C9F04_RS10730;Dbxref=Genbank:WP_146712619.1;Name=WP_146712619.1;Ontology_term=GO:0008483,GO:0030170;end_range=3554,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9F04_RS10730;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_146712619.1;transl_table=11
##sequence-region NZ_PYKF01000158.1 1 3538
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000158.1	RefSeq	region	1	3538	.	+	.	ID=NZ_PYKF01000158.1:1..3538;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000158.1	RefSeq	pseudogene	1	200	.	-	.	ID=gene-C9F04_RS03320;Name=C9F04_RS03320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03320;old_locus_tag=C9F04_03425;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000158.1	Protein Homology	CDS	1	200	.	-	0	ID=cds-C9F04_RS03320;Parent=gene-C9F04_RS03320;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152086.1;locus_tag=C9F04_RS03320;partial=true;product=inosine/guanosine kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000158.1	RefSeq	gene	353	1324	.	+	.	ID=gene-C9F04_RS03325;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9F04_RS03325;old_locus_tag=C9F04_03430
NZ_PYKF01000158.1	Protein Homology	CDS	353	1324	.	+	0	ID=cds-WP_001539341.1;Parent=gene-C9F04_RS03325;Dbxref=Genbank:WP_001539341.1;Name=WP_001539341.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9F04_RS03325;product=acetyl esterase;protein_id=WP_001539341.1;transl_table=11
NZ_PYKF01000158.1	RefSeq	gene	1321	2283	.	-	.	ID=gene-C9F04_RS03330;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9F04_RS03330;old_locus_tag=C9F04_03435
NZ_PYKF01000158.1	Protein Homology	CDS	1321	2283	.	-	0	ID=cds-WP_079801863.1;Parent=gene-C9F04_RS03330;Dbxref=Genbank:WP_079801863.1;Name=WP_079801863.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9F04_RS03330;product=ferrochelatase;protein_id=WP_079801863.1;transl_table=11
NZ_PYKF01000158.1	RefSeq	gene	2512	3156	.	-	.	ID=gene-C9F04_RS03335;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9F04_RS03335;old_locus_tag=C9F04_03440
NZ_PYKF01000158.1	Protein Homology	CDS	2512	3156	.	-	0	ID=cds-WP_001220237.1;Parent=gene-C9F04_RS03335;Dbxref=Genbank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9F04_RS03335;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11
##sequence-region NZ_PYKF01000543.1 1 3538
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000543.1	RefSeq	region	1	3538	.	+	.	ID=NZ_PYKF01000543.1:1..3538;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000543.1	RefSeq	pseudogene	1	1465	.	-	.	ID=gene-C9F04_RS16260;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=pseudogene;locus_tag=C9F04_RS16260;old_locus_tag=C9F04_16760;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000543.1	Protein Homology	CDS	1	1465	.	-	0	ID=cds-C9F04_RS16260;Parent=gene-C9F04_RS16260;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F04_RS16260;partial=true;product=multidrug efflux RND transporter permease subunit MdsB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000543.1	RefSeq	gene	1462	2688	.	-	.	ID=gene-C9F04_RS16265;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9F04_RS16265;old_locus_tag=C9F04_16765
NZ_PYKF01000543.1	Protein Homology	CDS	1462	2688	.	-	0	ID=cds-WP_135369139.1;Parent=gene-C9F04_RS16265;Dbxref=Genbank:WP_135369139.1;Name=WP_135369139.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9F04_RS16265;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_135369139.1;transl_table=11
NZ_PYKF01000543.1	RefSeq	pseudogene	2965	3538	.	+	.	ID=gene-C9F04_RS16270;Name=C9F04_RS16270;end_range=3538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16270;old_locus_tag=C9F04_16770;partial=true;pseudo=true
NZ_PYKF01000543.1	Protein Homology	CDS	2965	3538	.	+	0	ID=cds-C9F04_RS16270;Parent=gene-C9F04_RS16270;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=3538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F04_RS16270;partial=true;product=cation transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000504.1 1 3520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000504.1	RefSeq	region	1	3520	.	+	.	ID=NZ_PYKF01000504.1:1..3520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000504.1	RefSeq	pseudogene	1	279	.	-	.	ID=gene-C9F04_RS15095;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=pseudogene;locus_tag=C9F04_RS15095;old_locus_tag=C9F04_15580;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000504.1	Protein Homology	CDS	1	279	.	-	0	ID=cds-C9F04_RS15095;Parent=gene-C9F04_RS15095;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9F04_RS15095;partial=true;product=3-isopropylmalate dehydratase small subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000504.1	RefSeq	gene	290	1690	.	-	.	ID=gene-C9F04_RS15100;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F04_RS15100;old_locus_tag=C9F04_15585
NZ_PYKF01000504.1	Protein Homology	CDS	290	1690	.	-	0	ID=cds-WP_001140634.1;Parent=gene-C9F04_RS15100;Dbxref=Genbank:WP_001140634.1;Name=WP_001140634.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9F04_RS15100;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140634.1;transl_table=11
NZ_PYKF01000504.1	RefSeq	gene	1693	2784	.	-	.	ID=gene-C9F04_RS15105;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9F04_RS15105;old_locus_tag=C9F04_15590
NZ_PYKF01000504.1	Protein Homology	CDS	1693	2784	.	-	0	ID=cds-WP_000042336.1;Parent=gene-C9F04_RS15105;Dbxref=Genbank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9F04_RS15105;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11
NZ_PYKF01000504.1	RefSeq	pseudogene	2784	3520	.	-	.	ID=gene-C9F04_RS15110;Name=C9F04_RS15110;end_range=3520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15110;old_locus_tag=C9F04_15595;partial=true;pseudo=true
NZ_PYKF01000504.1	Protein Homology	CDS	2784	3520	.	-	2	ID=cds-C9F04_RS15110;Parent=gene-C9F04_RS15110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F04_RS15110;partial=true;product=2-isopropylmalate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000044.1 1 3517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000044.1	RefSeq	region	1	3517	.	+	.	ID=NZ_PYKF01000044.1:1..3517;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000044.1	RefSeq	pseudogene	1	168	.	+	.	ID=gene-C9F04_RS00715;Name=C9F04_RS00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00715;old_locus_tag=C9F04_00770;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000044.1	Protein Homology	CDS	1	168	.	+	0	ID=cds-C9F04_RS00715;Parent=gene-C9F04_RS00715;Note=high-affinity transporter for xanthine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9F04_RS00715;partial=true;product=xanthine permease XanP;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000044.1	RefSeq	gene	289	1998	.	+	.	ID=gene-C9F04_RS00720;Name=C9F04_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00720;old_locus_tag=C9F04_00775
NZ_PYKF01000044.1	Protein Homology	CDS	289	1998	.	+	0	ID=cds-WP_146712163.1;Parent=gene-C9F04_RS00720;Dbxref=Genbank:WP_146712163.1;Name=WP_146712163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9F04_RS00720;product=AsmA family protein;protein_id=WP_146712163.1;transl_table=11
NZ_PYKF01000044.1	RefSeq	gene	2101	3517	.	-	.	ID=gene-C9F04_RS00725;Name=yicI;end_range=3517,.;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9F04_RS00725;old_locus_tag=C9F04_00780;partial=true
NZ_PYKF01000044.1	Protein Homology	CDS	2101	3517	.	-	1	ID=cds-WP_146712164.1;Parent=gene-C9F04_RS00725;Dbxref=Genbank:WP_146712164.1;Name=WP_146712164.1;Ontology_term=GO:0005975,GO:0004553;end_range=3517,.;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068331.1;locus_tag=C9F04_RS00725;partial=true;product=alpha-xylosidase;protein_id=WP_146712164.1;transl_table=11
##sequence-region NZ_PYKF01000655.1 1 3510
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000655.1	RefSeq	region	1	3510	.	+	.	ID=NZ_PYKF01000655.1:1..3510;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000655.1	RefSeq	gene	1	414	.	+	.	ID=gene-C9F04_RS20100;Name=C9F04_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20100;old_locus_tag=C9F04_20760;partial=true;start_range=.,1
NZ_PYKF01000655.1	Protein Homology	CDS	1	414	.	+	0	ID=cds-WP_261771405.1;Parent=gene-C9F04_RS20100;Dbxref=Genbank:WP_261771405.1;Name=WP_261771405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9F04_RS20100;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_261771405.1;start_range=.,1;transl_table=11
NZ_PYKF01000655.1	RefSeq	gene	417	758	.	-	.	ID=gene-C9F04_RS20105;Name=C9F04_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20105;old_locus_tag=C9F04_20765
NZ_PYKF01000655.1	Protein Homology	CDS	417	758	.	-	0	ID=cds-WP_000560824.1;Parent=gene-C9F04_RS20105;Dbxref=Genbank:WP_000560824.1;Name=WP_000560824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9F04_RS20105;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11
NZ_PYKF01000655.1	RefSeq	gene	755	1072	.	-	.	ID=gene-C9F04_RS20110;Name=C9F04_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20110;old_locus_tag=C9F04_20770
NZ_PYKF01000655.1	Protein Homology	CDS	755	1072	.	-	0	ID=cds-WP_000535852.1;Parent=gene-C9F04_RS20110;Dbxref=Genbank:WP_000535852.1;Name=WP_000535852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9F04_RS20110;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11
NZ_PYKF01000655.1	RefSeq	gene	1355	2899	.	-	.	ID=gene-C9F04_RS20115;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9F04_RS20115;old_locus_tag=C9F04_20775
NZ_PYKF01000655.1	Protein Homology	CDS	1355	2899	.	-	0	ID=cds-WP_146713072.1;Parent=gene-C9F04_RS20115;Dbxref=Genbank:WP_146713072.1;Name=WP_146713072.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9F04_RS20115;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_146713072.1;transl_table=11
NZ_PYKF01000655.1	RefSeq	gene	2902	3510	.	-	.	ID=gene-C9F04_RS20120;Name=C9F04_RS20120;end_range=3510,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20120;old_locus_tag=C9F04_20780;partial=true
NZ_PYKF01000655.1	Protein Homology	CDS	2902	3510	.	-	0	ID=cds-WP_186799061.1;Parent=gene-C9F04_RS20120;Dbxref=Genbank:WP_186799061.1;Name=WP_186799061.1;Ontology_term=GO:0003824;end_range=3510,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F04_RS20120;partial=true;product=dihydroxy-acid dehydratase;protein_id=WP_186799061.1;transl_table=11
##sequence-region NZ_PYKF01000034.1 1 3497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000034.1	RefSeq	region	1	3497	.	+	.	ID=NZ_PYKF01000034.1:1..3497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000034.1	RefSeq	gene	1	962	.	-	.	ID=gene-C9F04_RS00510;Name=C9F04_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00510;old_locus_tag=C9F04_00540;partial=true;start_range=.,1
NZ_PYKF01000034.1	Protein Homology	CDS	1	962	.	-	0	ID=cds-WP_186798975.1;Parent=gene-C9F04_RS00510;Dbxref=Genbank:WP_186798975.1;Name=WP_186798975.1;Ontology_term=GO:0009060,GO:0004129,GO:0020037,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9F04_RS00510;partial=true;product=cbb3-type cytochrome c oxidase subunit I;protein_id=WP_186798975.1;start_range=.,1;transl_table=11
NZ_PYKF01000034.1	RefSeq	pseudogene	973	1929	.	-	.	ID=gene-C9F04_RS00515;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=pseudogene;locus_tag=C9F04_RS00515;old_locus_tag=C9F04_00545;pseudo=true
NZ_PYKF01000034.1	Protein Homology	CDS	973	1929	.	-	0	ID=cds-C9F04_RS00515;Parent=gene-C9F04_RS00515;Note=internal stop;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9F04_RS00515;product=cytochrome o ubiquinol oxidase subunit II;pseudo=true;transl_table=11
NZ_PYKF01000034.1	RefSeq	gene	2382	3497	.	-	.	ID=gene-C9F04_RS00520;Name=C9F04_RS00520;end_range=3497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00520;old_locus_tag=C9F04_00550;partial=true
NZ_PYKF01000034.1	Protein Homology	CDS	2382	3497	.	-	0	ID=cds-WP_146712150.1;Parent=gene-C9F04_RS00520;Dbxref=Genbank:WP_146712150.1;Name=WP_146712150.1;Ontology_term=GO:0055085,GO:0022857;end_range=3497,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9F04_RS00520;partial=true;product=MFS transporter;protein_id=WP_146712150.1;transl_table=11
##sequence-region NZ_PYKF01000430.1 1 3497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000430.1	RefSeq	region	1	3497	.	+	.	ID=NZ_PYKF01000430.1:1..3497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000430.1	RefSeq	gene	1	127	.	+	.	ID=gene-C9F04_RS27040;Name=C9F04_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27040;partial=true;start_range=.,1
NZ_PYKF01000430.1	Protein Homology	CDS	1	127	.	+	1	ID=cds-WP_261771075.1;Parent=gene-C9F04_RS27040;Dbxref=Genbank:WP_261771075.1;Name=WP_261771075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F04_RS27040;partial=true;product=hypothetical protein;protein_id=WP_261771075.1;start_range=.,1;transl_table=11
NZ_PYKF01000430.1	RefSeq	gene	139	1107	.	+	.	ID=gene-C9F04_RS12920;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9F04_RS12920;old_locus_tag=C9F04_13345
NZ_PYKF01000430.1	Protein Homology	CDS	139	1107	.	+	0	ID=cds-WP_023216393.1;Parent=gene-C9F04_RS12920;Dbxref=Genbank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9F04_RS12920;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11
NZ_PYKF01000430.1	RefSeq	pseudogene	1265	2983	.	+	.	ID=gene-C9F04_RS12925;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=pseudogene;locus_tag=C9F04_RS12925;old_locus_tag=C9F04_13350;pseudo=true
NZ_PYKF01000430.1	Protein Homology	CDS	1265	2983	.	+	0	ID=cds-C9F04_RS12925;Parent=gene-C9F04_RS12925;Note=internal stop;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9F04_RS12925;product=ubiquinone-dependent pyruvate dehydrogenase;pseudo=true;transl_table=11
NZ_PYKF01000430.1	RefSeq	pseudogene	3022	3462	.	+	.	ID=gene-C9F04_RS12930;Name=ltaE;end_range=3462,.;gbkey=Gene;gene=ltaE;gene_biotype=pseudogene;locus_tag=C9F04_RS12930;old_locus_tag=C9F04_13355;partial=true;pseudo=true
NZ_PYKF01000430.1	Protein Homology	CDS	3022	3462	.	+	0	ID=cds-C9F04_RS12930;Parent=gene-C9F04_RS12930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006520,GO:0016829;end_range=3462,.;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9F04_RS12930;partial=true;product=low-specificity L-threonine aldolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000297.1 1 3494
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000297.1	RefSeq	region	1	3494	.	+	.	ID=NZ_PYKF01000297.1:1..3494;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000297.1	RefSeq	gene	1	625	.	+	.	ID=gene-C9F04_RS08645;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9F04_RS08645;old_locus_tag=C9F04_08930;partial=true;start_range=.,1
NZ_PYKF01000297.1	Protein Homology	CDS	1	625	.	+	1	ID=cds-WP_146712509.1;Parent=gene-C9F04_RS08645;Dbxref=Genbank:WP_146712509.1;Name=WP_146712509.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9F04_RS08645;partial=true;product=BtpA family protein SgcQ;protein_id=WP_146712509.1;start_range=.,1;transl_table=11
NZ_PYKF01000297.1	RefSeq	gene	757	1194	.	+	.	ID=gene-C9F04_RS08650;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9F04_RS08650;old_locus_tag=C9F04_08935
NZ_PYKF01000297.1	Protein Homology	CDS	757	1194	.	+	0	ID=cds-WP_000606458.1;Parent=gene-C9F04_RS08650;Dbxref=Genbank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9F04_RS08650;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11
NZ_PYKF01000297.1	RefSeq	gene	1206	1838	.	+	.	ID=gene-C9F04_RS08655;Name=C9F04_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08655;old_locus_tag=C9F04_08940
NZ_PYKF01000297.1	Protein Homology	CDS	1206	1838	.	+	0	ID=cds-WP_135369484.1;Parent=gene-C9F04_RS08655;Dbxref=Genbank:WP_135369484.1;Name=WP_135369484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9F04_RS08655;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_135369484.1;transl_table=11
NZ_PYKF01000297.1	RefSeq	gene	1854	2645	.	+	.	ID=gene-C9F04_RS08660;Name=C9F04_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08660;old_locus_tag=C9F04_08945
NZ_PYKF01000297.1	Protein Homology	CDS	1854	2645	.	+	0	ID=cds-WP_001670738.1;Parent=gene-C9F04_RS08660;Dbxref=Genbank:WP_001670738.1;Name=WP_001670738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9F04_RS08660;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11
NZ_PYKF01000297.1	RefSeq	gene	2645	3082	.	+	.	ID=gene-C9F04_RS08665;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9F04_RS08665;old_locus_tag=C9F04_08950
NZ_PYKF01000297.1	Protein Homology	CDS	2645	3082	.	+	0	ID=cds-WP_135369483.1;Parent=gene-C9F04_RS08665;Dbxref=Genbank:WP_135369483.1;Name=WP_135369483.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9F04_RS08665;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_135369483.1;transl_table=11
NZ_PYKF01000297.1	RefSeq	gene	3129	3494	.	-	.	ID=gene-C9F04_RS08670;Name=C9F04_RS08670;end_range=3494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08670;old_locus_tag=C9F04_08955;partial=true
NZ_PYKF01000297.1	Protein Homology	CDS	3129	3494	.	-	0	ID=cds-WP_186799011.1;Parent=gene-C9F04_RS08670;Dbxref=Genbank:WP_186799011.1;Name=WP_186799011.1;Ontology_term=GO:0016491;end_range=3494,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9F04_RS08670;partial=true;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_186799011.1;transl_table=11
##sequence-region NZ_PYKF01000356.1 1 3485
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000356.1	RefSeq	region	1	3485	.	+	.	ID=NZ_PYKF01000356.1:1..3485;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000356.1	RefSeq	pseudogene	1	503	.	+	.	ID=gene-C9F04_RS10470;Name=C9F04_RS10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10470;old_locus_tag=C9F04_10805;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000356.1	Protein Homology	CDS	1	503	.	+	2	ID=cds-C9F04_RS10470;Parent=gene-C9F04_RS10470;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9F04_RS10470;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000356.1	RefSeq	gene	500	793	.	+	.	ID=gene-C9F04_RS10475;Name=C9F04_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10475;old_locus_tag=C9F04_10810
NZ_PYKF01000356.1	Protein Homology	CDS	500	793	.	+	0	ID=cds-WP_000093359.1;Parent=gene-C9F04_RS10475;Dbxref=Genbank:WP_000093359.1;Name=WP_000093359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9F04_RS10475;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11
NZ_PYKF01000356.1	RefSeq	gene	1031	2671	.	+	.	ID=gene-C9F04_RS10480;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9F04_RS10480;old_locus_tag=C9F04_10815
NZ_PYKF01000356.1	Protein Homology	CDS	1031	2671	.	+	0	ID=cds-WP_135369768.1;Parent=gene-C9F04_RS10480;Dbxref=Genbank:WP_135369768.1;Name=WP_135369768.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9F04_RS10480;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_135369768.1;transl_table=11
NZ_PYKF01000356.1	RefSeq	pseudogene	2713	3485	.	-	.	ID=gene-C9F04_RS10485;Name=C9F04_RS10485;end_range=3485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10485;old_locus_tag=C9F04_10820;partial=true;pseudo=true
NZ_PYKF01000356.1	Protein Homology	CDS	2713	3485	.	-	2	ID=cds-C9F04_RS10485;Parent=gene-C9F04_RS10485;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9F04_RS10485;partial=true;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000232.1 1 17718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000232.1	RefSeq	region	1	17718	.	+	.	ID=NZ_PYKF01000232.1:1..17718;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000232.1	RefSeq	gene	1	1243	.	-	.	ID=gene-C9F04_RS06035;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9F04_RS06035;old_locus_tag=C9F04_06225;partial=true;start_range=.,1
NZ_PYKF01000232.1	Protein Homology	CDS	1	1243	.	-	0	ID=cds-WP_186799005.1;Parent=gene-C9F04_RS06035;Dbxref=Genbank:WP_186799005.1;Name=WP_186799005.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9F04_RS06035;partial=true;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_186799005.1;start_range=.,1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	1419	2084	.	+	.	ID=gene-C9F04_RS06040;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9F04_RS06040;old_locus_tag=C9F04_06230
NZ_PYKF01000232.1	Protein Homology	CDS	1419	2084	.	+	0	ID=cds-WP_000380129.1;Parent=gene-C9F04_RS06040;Dbxref=Genbank:WP_000380129.1;Name=WP_000380129.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9F04_RS06040;product=DNA repair protein RadC;protein_id=WP_000380129.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	2302	2538	.	+	.	ID=gene-C9F04_RS06045;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9F04_RS06045;old_locus_tag=C9F04_06235
NZ_PYKF01000232.1	Protein Homology	CDS	2302	2538	.	+	0	ID=cds-WP_001519051.1;Parent=gene-C9F04_RS06045;Dbxref=Genbank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9F04_RS06045;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	2559	2726	.	+	.	ID=gene-C9F04_RS06050;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9F04_RS06050;old_locus_tag=C9F04_06240
NZ_PYKF01000232.1	Protein Homology	CDS	2559	2726	.	+	0	ID=cds-WP_001051798.1;Parent=gene-C9F04_RS06050;Dbxref=Genbank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9F04_RS06050;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	2824	3633	.	+	.	ID=gene-C9F04_RS06055;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9F04_RS06055;old_locus_tag=C9F04_06245
NZ_PYKF01000232.1	Protein Homology	CDS	2824	3633	.	+	0	ID=cds-WP_001114508.1;Parent=gene-C9F04_RS06055;Dbxref=Genbank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9F04_RS06055;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	3660	4139	.	-	.	ID=gene-C9F04_RS06060;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9F04_RS06060;old_locus_tag=C9F04_06250
NZ_PYKF01000232.1	Protein Homology	CDS	3660	4139	.	-	0	ID=cds-WP_001171887.1;Parent=gene-C9F04_RS06060;Dbxref=Genbank:WP_001171887.1;Name=WP_001171887.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9F04_RS06060;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171887.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	pseudogene	4148	5425	.	-	.	ID=gene-C9F04_RS06065;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=pseudogene;locus_tag=C9F04_RS06065;old_locus_tag=C9F04_06255;pseudo=true
NZ_PYKF01000232.1	Protein Homology	CDS	4148	5425	.	-	0	ID=cds-C9F04_RS06065;Parent=gene-C9F04_RS06065;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9F04_RS06065;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;pseudo=true;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	5834	6904	.	+	.	ID=gene-C9F04_RS06070;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9F04_RS06070;old_locus_tag=C9F04_06260
NZ_PYKF01000232.1	Protein Homology	CDS	5834	6904	.	+	0	ID=cds-WP_146712414.1;Parent=gene-C9F04_RS06070;Dbxref=Genbank:WP_146712414.1;Name=WP_146712414.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9F04_RS06070;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_146712414.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	6901	8025	.	+	.	ID=gene-C9F04_RS06075;Name=C9F04_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06075;old_locus_tag=C9F04_06265
NZ_PYKF01000232.1	Protein Homology	CDS	6901	8025	.	+	0	ID=cds-WP_135369635.1;Parent=gene-C9F04_RS06075;Dbxref=Genbank:WP_135369635.1;Name=WP_135369635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9F04_RS06075;product=glycosyltransferase family 4 protein;protein_id=WP_135369635.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	8018	8815	.	+	.	ID=gene-C9F04_RS06080;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9F04_RS06080;old_locus_tag=C9F04_06270
NZ_PYKF01000232.1	Protein Homology	CDS	8018	8815	.	+	0	ID=cds-WP_000229830.1;Parent=gene-C9F04_RS06080;Dbxref=Genbank:WP_000229830.1;Name=WP_000229830.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9F04_RS06080;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229830.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	8871	9080	.	+	.	ID=gene-C9F04_RS06085;Name=C9F04_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06085;old_locus_tag=C9F04_06275
NZ_PYKF01000232.1	GeneMarkS-2+	CDS	8871	9080	.	+	0	ID=cds-WP_017442016.1;Parent=gene-C9F04_RS06085;Dbxref=Genbank:WP_017442016.1;Name=WP_017442016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS06085;product=membrane protein;protein_id=WP_017442016.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	9150	10229	.	+	.	ID=gene-C9F04_RS06095;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9F04_RS06095;old_locus_tag=C9F04_06285
NZ_PYKF01000232.1	Protein Homology	CDS	9150	10229	.	+	0	ID=cds-WP_135369083.1;Parent=gene-C9F04_RS06095;Dbxref=Genbank:WP_135369083.1;Name=WP_135369083.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9F04_RS06095;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_135369083.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	10235	11248	.	+	.	ID=gene-C9F04_RS06100;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9F04_RS06100;old_locus_tag=C9F04_06290
NZ_PYKF01000232.1	Protein Homology	CDS	10235	11248	.	+	0	ID=cds-WP_000088482.1;Parent=gene-C9F04_RS06100;Dbxref=Genbank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9F04_RS06100;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	11266	12279	.	+	.	ID=gene-C9F04_RS06105;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9F04_RS06105;old_locus_tag=C9F04_06295
NZ_PYKF01000232.1	Protein Homology	CDS	11266	12279	.	+	0	ID=cds-WP_135420017.1;Parent=gene-C9F04_RS06105;Dbxref=Genbank:WP_135420017.1;Name=WP_135420017.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9F04_RS06105;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_135420017.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	12302	13000	.	+	.	ID=gene-C9F04_RS06110;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9F04_RS06110;old_locus_tag=C9F04_06300
NZ_PYKF01000232.1	Protein Homology	CDS	12302	13000	.	+	0	ID=cds-WP_146712415.1;Parent=gene-C9F04_RS06110;Dbxref=Genbank:WP_146712415.1;Name=WP_146712415.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9F04_RS06110;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_146712415.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	13150	13959	.	+	.	ID=gene-C9F04_RS06115;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9F04_RS06115;old_locus_tag=C9F04_06305
NZ_PYKF01000232.1	Protein Homology	CDS	13150	13959	.	+	0	ID=cds-WP_080222516.1;Parent=gene-C9F04_RS06115;Dbxref=Genbank:WP_080222516.1;Name=WP_080222516.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9F04_RS06115;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_080222516.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	14059	15204	.	+	.	ID=gene-C9F04_RS06120;Name=C9F04_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06120;old_locus_tag=C9F04_06310
NZ_PYKF01000232.1	Protein Homology	CDS	14059	15204	.	+	0	ID=cds-WP_146712416.1;Parent=gene-C9F04_RS06120;Dbxref=Genbank:WP_146712416.1;Name=WP_146712416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9F04_RS06120;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_146712416.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	15262	16476	.	-	.	ID=gene-C9F04_RS06125;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9F04_RS06125;old_locus_tag=C9F04_06315
NZ_PYKF01000232.1	Protein Homology	CDS	15262	16476	.	-	0	ID=cds-WP_039590890.1;Parent=gene-C9F04_RS06125;Dbxref=Genbank:WP_039590890.1;Name=WP_039590890.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9F04_RS06125;product=O-antigen ligase RfaL;protein_id=WP_039590890.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	gene	16516	17469	.	-	.	ID=gene-C9F04_RS06130;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9F04_RS06130;old_locus_tag=C9F04_06320
NZ_PYKF01000232.1	Protein Homology	CDS	16516	17469	.	-	0	ID=cds-WP_001264614.1;Parent=gene-C9F04_RS06130;Dbxref=Genbank:WP_001264614.1;Name=WP_001264614.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9F04_RS06130;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264614.1;transl_table=11
NZ_PYKF01000232.1	RefSeq	pseudogene	17469	17718	.	-	.	ID=gene-C9F04_RS06135;Name=C9F04_RS06135;end_range=17718,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06135;old_locus_tag=C9F04_06325;partial=true;pseudo=true
NZ_PYKF01000232.1	Protein Homology	CDS	17469	17718	.	-	1	ID=cds-C9F04_RS06135;Parent=gene-C9F04_RS06135;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=17718,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9F04_RS06135;partial=true;product=ADP-heptose--LPS heptosyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000384.1 1 3478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000384.1	RefSeq	region	1	3478	.	+	.	ID=NZ_PYKF01000384.1:1..3478;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000384.1	RefSeq	gene	1	675	.	-	.	ID=gene-C9F04_RS11325;Name=C9F04_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11325;old_locus_tag=C9F04_11700;partial=true;start_range=.,1
NZ_PYKF01000384.1	Protein Homology	CDS	1	675	.	-	0	ID=cds-WP_261770927.1;Parent=gene-C9F04_RS11325;Dbxref=Genbank:WP_261770927.1;Name=WP_261770927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819370.1;locus_tag=C9F04_RS11325;partial=true;product=AraC family transcriptional regulator;protein_id=WP_261770927.1;start_range=.,1;transl_table=11
NZ_PYKF01000384.1	RefSeq	pseudogene	701	1249	.	-	.	ID=gene-C9F04_RS11330;Name=C9F04_RS11330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11330;old_locus_tag=C9F04_11705;pseudo=true
NZ_PYKF01000384.1	Protein Homology	CDS	701	1249	.	-	0	ID=cds-C9F04_RS11330;Parent=gene-C9F04_RS11330;Note=internal stop;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9F04_RS11330;product=YbhB/YbcL family Raf kinase inhibitor-like protein;pseudo=true;transl_table=11
NZ_PYKF01000384.1	RefSeq	gene	1464	2675	.	+	.	ID=gene-C9F04_RS11335;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9F04_RS11335;old_locus_tag=C9F04_11710
NZ_PYKF01000384.1	Protein Homology	CDS	1464	2675	.	+	0	ID=cds-WP_146712648.1;Parent=gene-C9F04_RS11335;Dbxref=Genbank:WP_146712648.1;Name=WP_146712648.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9F04_RS11335;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_146712648.1;transl_table=11
NZ_PYKF01000384.1	RefSeq	gene	2733	3050	.	+	.	ID=gene-C9F04_RS11340;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9F04_RS11340;old_locus_tag=C9F04_11715
NZ_PYKF01000384.1	Protein Homology	CDS	2733	3050	.	+	0	ID=cds-WP_000561983.1;Parent=gene-C9F04_RS11340;Dbxref=Genbank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9F04_RS11340;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11
NZ_PYKF01000384.1	RefSeq	pseudogene	3095	3478	.	-	.	ID=gene-C9F04_RS11345;Name=C9F04_RS11345;end_range=3478,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11345;old_locus_tag=C9F04_11720;partial=true;pseudo=true
NZ_PYKF01000384.1	Protein Homology	CDS	3095	3478	.	-	0	ID=cds-C9F04_RS11345;Parent=gene-C9F04_RS11345;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=3478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226172.1;locus_tag=C9F04_RS11345;partial=true;product=CoA-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000329.1 1 3466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000329.1	RefSeq	region	1	3466	.	+	.	ID=NZ_PYKF01000329.1:1..3466;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000329.1	RefSeq	gene	1	759	.	+	.	ID=gene-C9F04_RS09570;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9F04_RS09570;old_locus_tag=C9F04_09880;partial=true;start_range=.,1
NZ_PYKF01000329.1	Protein Homology	CDS	1	759	.	+	0	ID=cds-WP_146712553.1;Parent=gene-C9F04_RS09570;Dbxref=Genbank:WP_146712553.1;Name=WP_146712553.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9F04_RS09570;partial=true;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_146712553.1;start_range=.,1;transl_table=11
NZ_PYKF01000329.1	RefSeq	gene	735	2345	.	+	.	ID=gene-C9F04_RS09575;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9F04_RS09575;old_locus_tag=C9F04_09885
NZ_PYKF01000329.1	Protein Homology	CDS	735	2345	.	+	0	ID=cds-WP_135369490.1;Parent=gene-C9F04_RS09575;Dbxref=Genbank:WP_135369490.1;Name=WP_135369490.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9F04_RS09575;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_135369490.1;transl_table=11
NZ_PYKF01000329.1	RefSeq	gene	2329	3036	.	+	.	ID=gene-C9F04_RS09580;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9F04_RS09580;old_locus_tag=C9F04_09890
NZ_PYKF01000329.1	Protein Homology	CDS	2329	3036	.	+	0	ID=cds-WP_023221144.1;Parent=gene-C9F04_RS09580;Dbxref=Genbank:WP_023221144.1;Name=WP_023221144.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9F04_RS09580;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_023221144.1;transl_table=11
NZ_PYKF01000329.1	RefSeq	pseudogene	3075	3466	.	-	.	ID=gene-C9F04_RS09585;Name=C9F04_RS09585;end_range=3466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09585;old_locus_tag=C9F04_09895;partial=true;pseudo=true
NZ_PYKF01000329.1	Protein Homology	CDS	3075	3466	.	-	2	ID=cds-C9F04_RS09585;Parent=gene-C9F04_RS09585;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9F04_RS09585;partial=true;product=DedA family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000247.1 1 3448
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000247.1	RefSeq	region	1	3448	.	+	.	ID=NZ_PYKF01000247.1:1..3448;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000247.1	RefSeq	pseudogene	1	138	.	-	.	ID=gene-C9F04_RS06680;Name=C9F04_RS06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06680;old_locus_tag=C9F04_06895;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000247.1	Protein Homology	CDS	1	138	.	-	0	ID=cds-C9F04_RS06680;Parent=gene-C9F04_RS06680;Note=chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9F04_RS06680;partial=true;product=curli assembly protein CsgE;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000247.1	RefSeq	gene	143	793	.	-	.	ID=gene-C9F04_RS06685;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9F04_RS06685;old_locus_tag=C9F04_06900
NZ_PYKF01000247.1	Protein Homology	CDS	143	793	.	-	0	ID=cds-WP_000481517.1;Parent=gene-C9F04_RS06685;Dbxref=Genbank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9F04_RS06685;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11
NZ_PYKF01000247.1	RefSeq	gene	1548	2003	.	+	.	ID=gene-C9F04_RS06690;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9F04_RS06690;old_locus_tag=C9F04_06910
NZ_PYKF01000247.1	Protein Homology	CDS	1548	2003	.	+	0	ID=cds-WP_000791655.1;Parent=gene-C9F04_RS06690;Dbxref=Genbank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9F04_RS06690;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11
NZ_PYKF01000247.1	RefSeq	gene	2045	2500	.	+	.	ID=gene-C9F04_RS06695;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9F04_RS06695;old_locus_tag=C9F04_06915
NZ_PYKF01000247.1	Protein Homology	CDS	2045	2500	.	+	0	ID=cds-WP_000771416.1;Parent=gene-C9F04_RS06695;Dbxref=Genbank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9F04_RS06695;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11
NZ_PYKF01000247.1	RefSeq	gene	2562	2888	.	+	.	ID=gene-C9F04_RS06700;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9F04_RS06700;old_locus_tag=C9F04_06920
NZ_PYKF01000247.1	Protein Homology	CDS	2562	2888	.	+	0	ID=cds-WP_000557256.1;Parent=gene-C9F04_RS06700;Dbxref=Genbank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9F04_RS06700;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11
NZ_PYKF01000247.1	RefSeq	gene	3019	3339	.	+	.	ID=gene-C9F04_RS06705;Name=C9F04_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06705;old_locus_tag=C9F04_06925
NZ_PYKF01000247.1	Protein Homology	CDS	3019	3339	.	+	0	ID=cds-WP_000111254.1;Parent=gene-C9F04_RS06705;Dbxref=Genbank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9F04_RS06705;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11
##sequence-region NZ_PYKF01000678.1 1 3441
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000678.1	RefSeq	region	1	3441	.	+	.	ID=NZ_PYKF01000678.1:1..3441;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000678.1	RefSeq	gene	1	265	.	+	.	ID=gene-C9F04_RS20845;Name=C9F04_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20845;old_locus_tag=C9F04_21515;partial=true;start_range=.,1
NZ_PYKF01000678.1	Protein Homology	CDS	1	265	.	+	1	ID=cds-WP_261771428.1;Parent=gene-C9F04_RS20845;Dbxref=Genbank:WP_261771428.1;Name=WP_261771428.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9F04_RS20845;partial=true;product=methyltransferase;protein_id=WP_261771428.1;start_range=.,1;transl_table=11
NZ_PYKF01000678.1	RefSeq	gene	346	2364	.	-	.	ID=gene-C9F04_RS20850;Name=C9F04_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20850;old_locus_tag=C9F04_21520
NZ_PYKF01000678.1	Protein Homology	CDS	346	2364	.	-	0	ID=cds-WP_000121533.1;Parent=gene-C9F04_RS20850;Dbxref=Genbank:WP_000121533.1;Name=WP_000121533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F04_RS20850;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121533.1;transl_table=11
NZ_PYKF01000678.1	RefSeq	gene	2535	3441	.	-	.	ID=gene-C9F04_RS20855;Name=C9F04_RS20855;end_range=3441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20855;old_locus_tag=C9F04_21525;partial=true
NZ_PYKF01000678.1	Protein Homology	CDS	2535	3441	.	-	1	ID=cds-WP_146713110.1;Parent=gene-C9F04_RS20855;Dbxref=Genbank:WP_146713110.1;Name=WP_146713110.1;Ontology_term=GO:0008483,GO:0030170;end_range=3441,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013364666.1;locus_tag=C9F04_RS20855;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_146713110.1;transl_table=11
##sequence-region NZ_PYKF01000560.1 1 3439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000560.1	RefSeq	region	1	3439	.	+	.	ID=NZ_PYKF01000560.1:1..3439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000560.1	RefSeq	gene	1158	2027	.	-	.	ID=gene-C9F04_RS16735;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9F04_RS16735;old_locus_tag=C9F04_17265
NZ_PYKF01000560.1	Protein Homology	CDS	1158	2027	.	-	0	ID=cds-WP_000114631.1;Parent=gene-C9F04_RS16735;Dbxref=Genbank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9F04_RS16735;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11
NZ_PYKF01000560.1	RefSeq	gene	2027	3193	.	-	.	ID=gene-C9F04_RS16740;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9F04_RS16740;old_locus_tag=C9F04_17270
NZ_PYKF01000560.1	Protein Homology	CDS	2027	3193	.	-	0	ID=cds-WP_146712907.1;Parent=gene-C9F04_RS16740;Dbxref=Genbank:WP_146712907.1;Name=WP_146712907.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F04_RS16740;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_146712907.1;transl_table=11
NZ_PYKF01000560.1	RefSeq	gene	3335	3439	.	-	.	ID=gene-C9F04_RS16745;Name=C9F04_RS16745;end_range=3439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16745;old_locus_tag=C9F04_17275;partial=true
NZ_PYKF01000560.1	Protein Homology	CDS	3335	3439	.	-	0	ID=cds-WP_146712908.1;Parent=gene-C9F04_RS16745;Dbxref=Genbank:WP_146712908.1;Name=WP_146712908.1;Ontology_term=GO:0016746;end_range=3439,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9F04_RS16745;partial=true;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_146712908.1;transl_table=11
##sequence-region NZ_PYKF01000767.1 1 3435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000767.1	RefSeq	region	1	3435	.	+	.	ID=NZ_PYKF01000767.1:1..3435;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000767.1	RefSeq	pseudogene	1	163	.	+	.	ID=gene-C9F04_RS27260;Name=C9F04_RS27260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27260;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000767.1	Protein Homology	CDS	1	163	.	+	1	ID=cds-C9F04_RS27260;Parent=gene-C9F04_RS27260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9F04_RS27260;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000767.1	RefSeq	gene	160	756	.	+	.	ID=gene-C9F04_RS23845;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9F04_RS23845;old_locus_tag=C9F04_24645
NZ_PYKF01000767.1	Protein Homology	CDS	160	756	.	+	0	ID=cds-WP_000569412.1;Parent=gene-C9F04_RS23845;Dbxref=Genbank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9F04_RS23845;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11
NZ_PYKF01000767.1	RefSeq	pseudogene	780	3435	.	+	.	ID=gene-C9F04_RS23850;Name=dnaE;end_range=3435,.;gbkey=Gene;gene=dnaE;gene_biotype=pseudogene;locus_tag=C9F04_RS23850;old_locus_tag=C9F04_24650;partial=true;pseudo=true
NZ_PYKF01000767.1	Protein Homology	CDS	780	3435	.	+	0	ID=cds-C9F04_RS23850;Parent=gene-C9F04_RS23850;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006260,GO:0003676,GO:0008408;end_range=3435,.;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776847.1;locus_tag=C9F04_RS23850;partial=true;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000071.1 1 3434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000071.1	RefSeq	region	1	3434	.	+	.	ID=NZ_PYKF01000071.1:1..3434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000071.1	RefSeq	pseudogene	1	150	.	+	.	ID=gene-C9F04_RS01400;Name=C9F04_RS01400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01400;old_locus_tag=C9F04_01470;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000071.1	Protein Homology	CDS	1	150	.	+	0	ID=cds-C9F04_RS01400;Parent=gene-C9F04_RS01400;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679878.1;locus_tag=C9F04_RS01400;partial=true;product=two-component system response regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000071.1	RefSeq	gene	147	1436	.	-	.	ID=gene-C9F04_RS01405;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9F04_RS01405;old_locus_tag=C9F04_01475
NZ_PYKF01000071.1	Protein Homology	CDS	147	1436	.	-	0	ID=cds-WP_146712188.1;Parent=gene-C9F04_RS01405;Dbxref=Genbank:WP_146712188.1;Name=WP_146712188.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9F04_RS01405;product=phosphoribosylamine--glycine ligase;protein_id=WP_146712188.1;transl_table=11
NZ_PYKF01000071.1	RefSeq	gene	1448	3037	.	-	.	ID=gene-C9F04_RS01410;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9F04_RS01410;old_locus_tag=C9F04_01480
NZ_PYKF01000071.1	Protein Homology	CDS	1448	3037	.	-	0	ID=cds-WP_135369432.1;Parent=gene-C9F04_RS01410;Dbxref=Genbank:WP_135369432.1;Name=WP_135369432.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9F04_RS01410;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_135369432.1;transl_table=11
##sequence-region NZ_PYKF01000434.1 1 3432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000434.1	RefSeq	region	1	3432	.	+	.	ID=NZ_PYKF01000434.1:1..3432;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000434.1	RefSeq	gene	1	725	.	-	.	ID=gene-C9F04_RS13060;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9F04_RS13060;old_locus_tag=C9F04_13490;partial=true;start_range=.,1
NZ_PYKF01000434.1	Protein Homology	CDS	1	725	.	-	0	ID=cds-WP_146712734.1;Parent=gene-C9F04_RS13060;Dbxref=Genbank:WP_146712734.1;Name=WP_146712734.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9F04_RS13060;partial=true;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_146712734.1;start_range=.,1;transl_table=11
NZ_PYKF01000434.1	RefSeq	gene	739	1446	.	-	.	ID=gene-C9F04_RS13065;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9F04_RS13065;old_locus_tag=C9F04_13495
NZ_PYKF01000434.1	Protein Homology	CDS	739	1446	.	-	0	ID=cds-WP_000569771.1;Parent=gene-C9F04_RS13065;Dbxref=Genbank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9F04_RS13065;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11
NZ_PYKF01000434.1	RefSeq	gene	1443	2129	.	-	.	ID=gene-C9F04_RS13070;Name=C9F04_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13070;old_locus_tag=C9F04_13500
NZ_PYKF01000434.1	Protein Homology	CDS	1443	2129	.	-	0	ID=cds-WP_146712735.1;Parent=gene-C9F04_RS13070;Dbxref=Genbank:WP_146712735.1;Name=WP_146712735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9F04_RS13070;product=histidine ABC transporter permease HisQ;protein_id=WP_146712735.1;transl_table=11
NZ_PYKF01000434.1	RefSeq	gene	2310	3092	.	-	.	ID=gene-C9F04_RS13075;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9F04_RS13075;old_locus_tag=C9F04_13505
NZ_PYKF01000434.1	Protein Homology	CDS	2310	3092	.	-	0	ID=cds-WP_000731868.1;Parent=gene-C9F04_RS13075;Dbxref=Genbank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F04_RS13075;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11
NZ_PYKF01000434.1	RefSeq	pseudogene	3330	3432	.	-	.	ID=gene-C9F04_RS13080;Name=C9F04_RS13080;end_range=3432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13080;old_locus_tag=C9F04_13510;partial=true;pseudo=true
NZ_PYKF01000434.1	Protein Homology	CDS	3330	3432	.	-	1	ID=cds-C9F04_RS13080;Parent=gene-C9F04_RS13080;Note=with HisPMQ is involved in the transport of histidine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9F04_RS13080;partial=true;product=histidine ABC transporter substrate-binding protein HisJ;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000353.1 1 3411
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000353.1	RefSeq	region	1	3411	.	+	.	ID=NZ_PYKF01000353.1:1..3411;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000353.1	RefSeq	gene	232	1701	.	-	.	ID=gene-C9F04_RS10420;Name=C9F04_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10420;old_locus_tag=C9F04_10755
NZ_PYKF01000353.1	Protein Homology	CDS	232	1701	.	-	0	ID=cds-WP_146712600.1;Parent=gene-C9F04_RS10420;Dbxref=Genbank:WP_146712600.1;Name=WP_146712600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9F04_RS10420;product=amino acid permease;protein_id=WP_146712600.1;transl_table=11
NZ_PYKF01000353.1	RefSeq	gene	1891	2754	.	-	.	ID=gene-C9F04_RS10425;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9F04_RS10425;old_locus_tag=C9F04_10760
NZ_PYKF01000353.1	Protein Homology	CDS	1891	2754	.	-	0	ID=cds-WP_146712601.1;Parent=gene-C9F04_RS10425;Dbxref=Genbank:WP_146712601.1;Name=WP_146712601.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9F04_RS10425;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_146712601.1;transl_table=11
NZ_PYKF01000353.1	RefSeq	pseudogene	2875	3402	.	+	.	ID=gene-C9F04_RS10430;Name=C9F04_RS10430;end_range=3402,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10430;old_locus_tag=C9F04_10765;partial=true;pseudo=true
NZ_PYKF01000353.1	Protein Homology	CDS	2875	3402	.	+	0	ID=cds-C9F04_RS10430;Parent=gene-C9F04_RS10430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3402,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9F04_RS10430;partial=true;product=YeiH family putative sulfate export transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000336.1 1 3377
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000336.1	RefSeq	region	1	3377	.	+	.	ID=NZ_PYKF01000336.1:1..3377;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000336.1	RefSeq	gene	1	787	.	-	.	ID=gene-C9F04_RS09775;Name=C9F04_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09775;old_locus_tag=C9F04_10085;partial=true;start_range=.,1
NZ_PYKF01000336.1	Protein Homology	CDS	1	787	.	-	0	ID=cds-WP_146712568.1;Parent=gene-C9F04_RS09775;Dbxref=Genbank:WP_146712568.1;Name=WP_146712568.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F04_RS09775;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146712568.1;start_range=.,1;transl_table=11
NZ_PYKF01000336.1	RefSeq	gene	800	2908	.	-	.	ID=gene-C9F04_RS09780;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=C9F04_RS09780;old_locus_tag=C9F04_10090
NZ_PYKF01000336.1	Protein Homology	CDS	800	2908	.	-	0	ID=cds-WP_001086481.1;Parent=gene-C9F04_RS09780;Dbxref=Genbank:WP_001086481.1;Name=WP_001086481.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F04_RS09780;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086481.1;transl_table=11
NZ_PYKF01000336.1	RefSeq	gene	3007	3377	.	+	.	ID=gene-C9F04_RS09785;Name=C9F04_RS09785;end_range=3377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09785;old_locus_tag=C9F04_10095;partial=true
NZ_PYKF01000336.1	Protein Homology	CDS	3007	3377	.	+	0	ID=cds-WP_146712569.1;Parent=gene-C9F04_RS09785;Dbxref=Genbank:WP_146712569.1;Name=WP_146712569.1;end_range=3377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=C9F04_RS09785;partial=true;product=MOSC N-terminal beta barrel domain-containing protein;protein_id=WP_146712569.1;transl_table=11
##sequence-region NZ_PYKF01000074.1 1 17694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000074.1	RefSeq	region	1	17694	.	+	.	ID=NZ_PYKF01000074.1:1..17694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000074.1	RefSeq	gene	1	1267	.	-	.	ID=gene-C9F04_RS01435;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=C9F04_RS01435;old_locus_tag=C9F04_01505;partial=true;start_range=.,1
NZ_PYKF01000074.1	Protein Homology	CDS	1	1267	.	-	0	ID=cds-WP_146712191.1;Parent=gene-C9F04_RS01435;Dbxref=Genbank:WP_146712191.1;Name=WP_146712191.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9F04_RS01435;partial=true;product=acyl-CoA synthetase FdrA;protein_id=WP_146712191.1;start_range=.,1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	1583	2632	.	+	.	ID=gene-C9F04_RS01440;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=C9F04_RS01440;old_locus_tag=C9F04_01510
NZ_PYKF01000074.1	Protein Homology	CDS	1583	2632	.	+	0	ID=cds-WP_023250795.1;Parent=gene-C9F04_RS01440;Dbxref=Genbank:WP_023250795.1;Name=WP_023250795.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=C9F04_RS01440;product=ureidoglycolate dehydrogenase;protein_id=WP_023250795.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	2654	3889	.	+	.	ID=gene-C9F04_RS01445;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=C9F04_RS01445;old_locus_tag=C9F04_01515
NZ_PYKF01000074.1	Protein Homology	CDS	2654	3889	.	+	0	ID=cds-WP_000589759.1;Parent=gene-C9F04_RS01445;Dbxref=Genbank:WP_000589759.1;Name=WP_000589759.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9F04_RS01445;product=allantoate deiminase;protein_id=WP_000589759.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	3900	4685	.	+	.	ID=gene-C9F04_RS01450;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=C9F04_RS01450;old_locus_tag=C9F04_01520
NZ_PYKF01000074.1	Protein Homology	CDS	3900	4685	.	+	0	ID=cds-WP_000540985.1;Parent=gene-C9F04_RS01450;Dbxref=Genbank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=C9F04_RS01450;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	4765	5913	.	-	.	ID=gene-C9F04_RS01455;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=C9F04_RS01455;old_locus_tag=C9F04_01525
NZ_PYKF01000074.1	Protein Homology	CDS	4765	5913	.	-	0	ID=cds-WP_146712194.1;Parent=gene-C9F04_RS01455;Dbxref=Genbank:WP_146712194.1;Name=WP_146712194.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=C9F04_RS01455;product=glycerate 3-kinase;protein_id=WP_146712194.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	5936	7234	.	-	.	ID=gene-C9F04_RS01460;Name=C9F04_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01460;old_locus_tag=C9F04_01530
NZ_PYKF01000074.1	Protein Homology	CDS	5936	7234	.	-	0	ID=cds-WP_146712192.1;Parent=gene-C9F04_RS01460;Dbxref=Genbank:WP_146712192.1;Name=WP_146712192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9F04_RS01460;product=uracil/xanthine transporter;protein_id=WP_146712192.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	7293	8654	.	-	.	ID=gene-C9F04_RS01465;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=C9F04_RS01465;old_locus_tag=C9F04_01535
NZ_PYKF01000074.1	Protein Homology	CDS	7293	8654	.	-	0	ID=cds-WP_000006865.1;Parent=gene-C9F04_RS01465;Dbxref=Genbank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=C9F04_RS01465;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	8733	10187	.	-	.	ID=gene-C9F04_RS01470;Name=C9F04_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01470;old_locus_tag=C9F04_01540
NZ_PYKF01000074.1	Protein Homology	CDS	8733	10187	.	-	0	ID=cds-WP_000401066.1;Parent=gene-C9F04_RS01470;Dbxref=Genbank:WP_000401066.1;Name=WP_000401066.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9F04_RS01470;product=putative allantoin permease;protein_id=WP_000401066.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	10283	11530	.	-	.	ID=gene-C9F04_RS01475;Name=C9F04_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01475;old_locus_tag=C9F04_01545
NZ_PYKF01000074.1	Protein Homology	CDS	10283	11530	.	-	0	ID=cds-WP_000005063.1;Parent=gene-C9F04_RS01475;Dbxref=Genbank:WP_000005063.1;Name=WP_000005063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=C9F04_RS01475;product=MFS transporter;protein_id=WP_000005063.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	11596	12474	.	-	.	ID=gene-C9F04_RS01480;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=C9F04_RS01480;old_locus_tag=C9F04_01550
NZ_PYKF01000074.1	Protein Homology	CDS	11596	12474	.	-	0	ID=cds-WP_000765815.1;Parent=gene-C9F04_RS01480;Dbxref=Genbank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9F04_RS01480;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	12575	13351	.	-	.	ID=gene-C9F04_RS01485;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=C9F04_RS01485;old_locus_tag=C9F04_01555
NZ_PYKF01000074.1	Protein Homology	CDS	12575	13351	.	-	0	ID=cds-WP_000943591.1;Parent=gene-C9F04_RS01485;Dbxref=Genbank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9F04_RS01485;product=hydroxypyruvate isomerase;protein_id=WP_000943591.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	13364	15145	.	-	.	ID=gene-C9F04_RS01490;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9F04_RS01490;old_locus_tag=C9F04_01560
NZ_PYKF01000074.1	Protein Homology	CDS	13364	15145	.	-	0	ID=cds-WP_146712193.1;Parent=gene-C9F04_RS01490;Dbxref=Genbank:WP_146712193.1;Name=WP_146712193.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9F04_RS01490;product=glyoxylate carboligase;protein_id=WP_146712193.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	15230	16048	.	-	.	ID=gene-C9F04_RS01495;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=C9F04_RS01495;old_locus_tag=C9F04_01565
NZ_PYKF01000074.1	Protein Homology	CDS	15230	16048	.	-	0	ID=cds-WP_000141265.1;Parent=gene-C9F04_RS01495;Dbxref=Genbank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9F04_RS01495;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	16127	16609	.	-	.	ID=gene-C9F04_RS01500;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=C9F04_RS01500;old_locus_tag=C9F04_01570
NZ_PYKF01000074.1	Protein Homology	CDS	16127	16609	.	-	0	ID=cds-WP_000764659.1;Parent=gene-C9F04_RS01500;Dbxref=Genbank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9F04_RS01500;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11
NZ_PYKF01000074.1	RefSeq	gene	16836	17681	.	+	.	ID=gene-C9F04_RS01505;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=C9F04_RS01505;old_locus_tag=C9F04_01575
NZ_PYKF01000074.1	Protein Homology	CDS	16836	17681	.	+	0	ID=cds-WP_261770729.1;Parent=gene-C9F04_RS01505;Dbxref=Genbank:WP_261770729.1;Name=WP_261770729.1;gbkey=CDS;gene=allS;inference=COORDINATES: protein motif:HMM:NF007501.0;locus_tag=C9F04_RS01505;product=HTH-type transcriptional activator AllS;protein_id=WP_261770729.1;transl_table=11
##sequence-region NZ_PYKF01000340.1 1 3369
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000340.1	RefSeq	region	1	3369	.	+	.	ID=NZ_PYKF01000340.1:1..3369;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000340.1	RefSeq	pseudogene	1	260	.	-	.	ID=gene-C9F04_RS09980;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=pseudogene;locus_tag=C9F04_RS09980;old_locus_tag=C9F04_10300;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000340.1	Protein Homology	CDS	1	260	.	-	0	ID=cds-C9F04_RS09980;Parent=gene-C9F04_RS09980;Note=part of the thiamine and TPP transport system tbpA-thiPQ%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=tbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308099.1;locus_tag=C9F04_RS09980;partial=true;product=thiamine ABC transporter substrate-binding protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000340.1	cmsearch	riboswitch	292	391	.	-	.	ID=id-NZ_PYKF01000340.1:292..391;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000340.1	RefSeq	gene	438	2096	.	-	.	ID=gene-C9F04_RS09985;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9F04_RS09985;old_locus_tag=C9F04_10305
NZ_PYKF01000340.1	Protein Homology	CDS	438	2096	.	-	0	ID=cds-WP_001139028.1;Parent=gene-C9F04_RS09985;Dbxref=Genbank:WP_001139028.1;Name=WP_001139028.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9F04_RS09985;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139028.1;transl_table=11
NZ_PYKF01000340.1	RefSeq	gene	2189	2311	.	+	.	ID=gene-C9F04_RS09990;Name=C9F04_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09990;old_locus_tag=C9F04_10310
NZ_PYKF01000340.1	Protein Homology	CDS	2189	2311	.	+	0	ID=cds-WP_135369491.1;Parent=gene-C9F04_RS09990;Dbxref=Genbank:WP_135369491.1;Name=WP_135369491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9F04_RS09990;product=glucose uptake inhibitor SgrT;protein_id=WP_135369491.1;transl_table=11
NZ_PYKF01000340.1	RefSeq	gene	2629	2910	.	+	.	ID=gene-C9F04_RS09995;Name=C9F04_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09995;old_locus_tag=C9F04_10315
NZ_PYKF01000340.1	Protein Homology	CDS	2629	2910	.	+	0	ID=cds-WP_000755258.1;Parent=gene-C9F04_RS09995;Dbxref=Genbank:WP_000755258.1;Name=WP_000755258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=C9F04_RS09995;product=DUF5339 family protein;protein_id=WP_000755258.1;transl_table=11
NZ_PYKF01000340.1	RefSeq	gene	2964	3369	.	-	.	ID=gene-C9F04_RS10000;Name=leuD;end_range=3369,.;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F04_RS10000;old_locus_tag=C9F04_10320;partial=true
NZ_PYKF01000340.1	Protein Homology	CDS	2964	3369	.	-	1	ID=cds-WP_146712580.1;Parent=gene-C9F04_RS10000;Dbxref=Genbank:WP_146712580.1;Name=WP_146712580.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;end_range=3369,.;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9F04_RS10000;partial=true;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_146712580.1;transl_table=11
##sequence-region NZ_PYKF01000149.1 1 3320
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000149.1	RefSeq	region	1	3320	.	+	.	ID=NZ_PYKF01000149.1:1..3320;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000149.1	RefSeq	pseudogene	1	417	.	+	.	ID=gene-C9F04_RS03135;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=pseudogene;locus_tag=C9F04_RS03135;old_locus_tag=C9F04_03235;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000149.1	Protein Homology	CDS	1	417	.	+	0	ID=cds-C9F04_RS03135;Parent=gene-C9F04_RS03135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F04_RS03135;partial=true;product=flagellar brake protein YcgR;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000149.1	RefSeq	gene	431	1042	.	-	.	ID=gene-C9F04_RS03140;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9F04_RS03140;old_locus_tag=C9F04_03240
NZ_PYKF01000149.1	Protein Homology	CDS	431	1042	.	-	0	ID=cds-WP_000776974.1;Parent=gene-C9F04_RS03140;Dbxref=Genbank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9F04_RS03140;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11
NZ_PYKF01000149.1	RefSeq	gene	1213	2127	.	+	.	ID=gene-C9F04_RS03145;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9F04_RS03145;old_locus_tag=C9F04_03245
NZ_PYKF01000149.1	Protein Homology	CDS	1213	2127	.	+	0	ID=cds-WP_023260327.1;Parent=gene-C9F04_RS03145;Dbxref=Genbank:WP_023260327.1;Name=WP_023260327.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9F04_RS03145;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023260327.1;transl_table=11
NZ_PYKF01000149.1	RefSeq	gene	2224	3320	.	+	.	ID=gene-C9F04_RS03150;Name=C9F04_RS03150;end_range=3320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03150;old_locus_tag=C9F04_03250;partial=true
NZ_PYKF01000149.1	Protein Homology	CDS	2224	3320	.	+	0	ID=cds-WP_146712280.1;Parent=gene-C9F04_RS03150;Dbxref=Genbank:WP_146712280.1;Name=WP_146712280.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0005451,GO:0016021;end_range=3320,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=C9F04_RS03150;partial=true;product=potassium/proton antiporter;protein_id=WP_146712280.1;transl_table=11
##sequence-region NZ_PYKF01000791.1 1 3308
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000791.1	RefSeq	region	1	3308	.	+	.	ID=NZ_PYKF01000791.1:1..3308;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000791.1	RefSeq	gene	1	2102	.	+	.	ID=gene-C9F04_RS24695;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9F04_RS24695;old_locus_tag=C9F04_25540;partial=true;start_range=.,1
NZ_PYKF01000791.1	Protein Homology	CDS	1	2102	.	+	2	ID=cds-WP_146713315.1;Parent=gene-C9F04_RS24695;Dbxref=Genbank:WP_146713315.1;Name=WP_146713315.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9F04_RS24695;partial=true;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_146713315.1;start_range=.,1;transl_table=11
NZ_PYKF01000791.1	RefSeq	pseudogene	2117	3238	.	+	.	ID=gene-C9F04_RS24700;Name=odhB;end_range=3238,.;gbkey=Gene;gene=odhB;gene_biotype=pseudogene;locus_tag=C9F04_RS24700;old_locus_tag=C9F04_25545;partial=true;pseudo=true
NZ_PYKF01000791.1	Protein Homology	CDS	2117	3238	.	+	0	ID=cds-C9F04_RS24700;Parent=gene-C9F04_RS24700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006099,GO:0004149,GO:0045252;end_range=3238,.;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9F04_RS24700;partial=true;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000291.1 1 3306
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000291.1	RefSeq	region	1	3306	.	+	.	ID=NZ_PYKF01000291.1:1..3306;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000291.1	RefSeq	gene	1	1717	.	+	.	ID=gene-C9F04_RS08465;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9F04_RS08465;old_locus_tag=C9F04_08740;partial=true;start_range=.,1
NZ_PYKF01000291.1	Protein Homology	CDS	1	1717	.	+	1	ID=cds-WP_146712502.1;Parent=gene-C9F04_RS08465;Dbxref=Genbank:WP_146712502.1;Name=WP_146712502.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9F04_RS08465;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_146712502.1;start_range=.,1;transl_table=11
NZ_PYKF01000291.1	RefSeq	gene	2135	2470	.	+	.	ID=gene-C9F04_RS08470;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9F04_RS08470;old_locus_tag=C9F04_08745
NZ_PYKF01000291.1	Protein Homology	CDS	2135	2470	.	+	0	ID=cds-WP_001031445.1;Parent=gene-C9F04_RS08470;Dbxref=Genbank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9F04_RS08470;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11
NZ_PYKF01000291.1	RefSeq	gene	2483	2962	.	+	.	ID=gene-C9F04_RS08475;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9F04_RS08475;old_locus_tag=C9F04_08750
NZ_PYKF01000291.1	Protein Homology	CDS	2483	2962	.	+	0	ID=cds-WP_000820751.1;Parent=gene-C9F04_RS08475;Dbxref=Genbank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9F04_RS08475;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11
NZ_PYKF01000291.1	RefSeq	pseudogene	2940	3306	.	+	.	ID=gene-C9F04_RS08480;Name=C9F04_RS08480;end_range=3306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08480;old_locus_tag=C9F04_08755;partial=true;pseudo=true
NZ_PYKF01000291.1	Protein Homology	CDS	2940	3306	.	+	0	ID=cds-C9F04_RS08480;Parent=gene-C9F04_RS08480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9F04_RS08480;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000579.1 1 3301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000579.1	RefSeq	region	1	3301	.	+	.	ID=NZ_PYKF01000579.1:1..3301;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000579.1	RefSeq	gene	1	1410	.	+	.	ID=gene-C9F04_RS17290;Name=C9F04_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17290;old_locus_tag=C9F04_17850;partial=true;start_range=.,1
NZ_PYKF01000579.1	Protein Homology	CDS	1	1410	.	+	0	ID=cds-WP_146712935.1;Parent=gene-C9F04_RS17290;Dbxref=Genbank:WP_146712935.1;Name=WP_146712935.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9F04_RS17290;partial=true;product=TROVE domain-containing protein;protein_id=WP_146712935.1;start_range=.,1;transl_table=11
NZ_PYKF01000579.1	RefSeq	gene	1756	2970	.	+	.	ID=gene-C9F04_RS17295;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=C9F04_RS17295;old_locus_tag=C9F04_17855
NZ_PYKF01000579.1	Protein Homology	CDS	1756	2970	.	+	0	ID=cds-WP_001105526.1;Parent=gene-C9F04_RS17295;Dbxref=Genbank:WP_001105526.1;Name=WP_001105526.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=C9F04_RS17295;product=RNA-splicing ligase RtcB;protein_id=WP_001105526.1;transl_table=11
NZ_PYKF01000579.1	RefSeq	pseudogene	2974	3301	.	+	.	ID=gene-C9F04_RS17300;Name=C9F04_RS17300;end_range=3301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17300;old_locus_tag=C9F04_17860;partial=true;pseudo=true
NZ_PYKF01000579.1	Protein Homology	CDS	2974	3301	.	+	0	ID=cds-C9F04_RS17300;Parent=gene-C9F04_RS17300;Note=catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=C9F04_RS17300;partial=true;product=RNA 3'-terminal phosphate cyclase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000378.1 1 3295
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000378.1	RefSeq	region	1	3295	.	+	.	ID=NZ_PYKF01000378.1:1..3295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000378.1	RefSeq	pseudogene	1	239	.	-	.	ID=gene-C9F04_RS11135;Name=C9F04_RS11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11135;old_locus_tag=C9F04_11500;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000378.1	Protein Homology	CDS	1	239	.	-	0	ID=cds-C9F04_RS11135;Parent=gene-C9F04_RS11135;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F04_RS11135;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000378.1	RefSeq	gene	486	872	.	+	.	ID=gene-C9F04_RS11140;Name=C9F04_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11140;old_locus_tag=C9F04_11505
NZ_PYKF01000378.1	Protein Homology	CDS	486	872	.	+	0	ID=cds-WP_000272193.1;Parent=gene-C9F04_RS11140;Dbxref=Genbank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9F04_RS11140;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11
NZ_PYKF01000378.1	RefSeq	gene	961	2118	.	-	.	ID=gene-C9F04_RS11145;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9F04_RS11145;old_locus_tag=C9F04_11510
NZ_PYKF01000378.1	Protein Homology	CDS	961	2118	.	-	0	ID=cds-WP_000929420.1;Parent=gene-C9F04_RS11145;Dbxref=Genbank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9F04_RS11145;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11
NZ_PYKF01000378.1	RefSeq	gene	2271	3295	.	-	.	ID=gene-C9F04_RS11150;Name=degP;end_range=3295,.;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9F04_RS11150;old_locus_tag=C9F04_11515;partial=true
NZ_PYKF01000378.1	Protein Homology	CDS	2271	3295	.	-	2	ID=cds-WP_146712640.1;Parent=gene-C9F04_RS11150;Dbxref=Genbank:WP_146712640.1;Name=WP_146712640.1;end_range=3295,.;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9F04_RS11150;partial=true;product=serine endoprotease DegP;protein_id=WP_146712640.1;transl_table=11
##sequence-region NZ_PYKF01000779.1 1 3282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000779.1	RefSeq	region	1	3282	.	+	.	ID=NZ_PYKF01000779.1:1..3282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000779.1	RefSeq	gene	9	84	.	+	.	ID=gene-C9F04_RS24380;Name=C9F04_RS24380;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS24380;old_locus_tag=C9F04_25200
NZ_PYKF01000779.1	tRNAscan-SE	tRNA	9	84	.	+	.	ID=rna-C9F04_RS24380;Parent=gene-C9F04_RS24380;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS24380;product=tRNA-Asn
NZ_PYKF01000779.1	tRNAscan-SE	exon	9	84	.	+	.	ID=exon-C9F04_RS24380-1;Parent=rna-C9F04_RS24380;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS24380;product=tRNA-Asn
NZ_PYKF01000779.1	RefSeq	gene	311	1240	.	-	.	ID=gene-C9F04_RS24385;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9F04_RS24385;old_locus_tag=C9F04_25205
NZ_PYKF01000779.1	Protein Homology	CDS	311	1240	.	-	0	ID=cds-WP_001252817.1;Parent=gene-C9F04_RS24385;Dbxref=Genbank:WP_001252817.1;Name=WP_001252817.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9F04_RS24385;product=L%2CD-transpeptidase;protein_id=WP_001252817.1;transl_table=11
NZ_PYKF01000779.1	RefSeq	gene	1318	2388	.	-	.	ID=gene-C9F04_RS24390;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9F04_RS24390;old_locus_tag=C9F04_25210
NZ_PYKF01000779.1	Protein Homology	CDS	1318	2388	.	-	0	ID=cds-WP_135369612.1;Parent=gene-C9F04_RS24390;Dbxref=Genbank:WP_135369612.1;Name=WP_135369612.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9F04_RS24390;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_135369612.1;transl_table=11
NZ_PYKF01000779.1	RefSeq	gene	2415	3158	.	-	.	ID=gene-C9F04_RS24395;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9F04_RS24395;old_locus_tag=C9F04_25215
NZ_PYKF01000779.1	Protein Homology	CDS	2415	3158	.	-	0	ID=cds-WP_146713293.1;Parent=gene-C9F04_RS24395;Dbxref=Genbank:WP_146713293.1;Name=WP_146713293.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9F04_RS24395;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_146713293.1;transl_table=11
NZ_PYKF01000779.1	RefSeq	gene	3155	3282	.	-	.	ID=gene-C9F04_RS24400;Name=C9F04_RS24400;end_range=3282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24400;old_locus_tag=C9F04_25220;partial=true
NZ_PYKF01000779.1	Protein Homology	CDS	3155	3282	.	-	2	ID=cds-WP_186799094.1;Parent=gene-C9F04_RS24400;Dbxref=Genbank:WP_186799094.1;Name=WP_186799094.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;end_range=3282,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9F04_RS24400;partial=true;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_186799094.1;transl_table=11
##sequence-region NZ_PYKF01000111.1 1 3280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000111.1	RefSeq	region	1	3280	.	+	.	ID=NZ_PYKF01000111.1:1..3280;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000111.1	RefSeq	gene	192	2300	.	+	.	ID=gene-C9F04_RS02180;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F04_RS02180;old_locus_tag=C9F04_02260
NZ_PYKF01000111.1	Protein Homology	CDS	192	2300	.	+	0	ID=cds-WP_146712227.1;Parent=gene-C9F04_RS02180;Dbxref=Genbank:WP_146712227.1;Name=WP_146712227.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F04_RS02180;product=ferrioxamine B receptor FoxA;protein_id=WP_146712227.1;transl_table=11
NZ_PYKF01000111.1	RefSeq	gene	2341	2973	.	-	.	ID=gene-C9F04_RS02185;Name=C9F04_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02185;old_locus_tag=C9F04_02265
NZ_PYKF01000111.1	Protein Homology	CDS	2341	2973	.	-	0	ID=cds-WP_146712228.1;Parent=gene-C9F04_RS02185;Dbxref=Genbank:WP_146712228.1;Name=WP_146712228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9F04_RS02185;product=LysE family transporter;protein_id=WP_146712228.1;transl_table=11
##sequence-region NZ_PYKF01000596.1 1 3278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000596.1	RefSeq	region	1	3278	.	+	.	ID=NZ_PYKF01000596.1:1..3278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000596.1	RefSeq	gene	761	2002	.	+	.	ID=gene-C9F04_RS17765;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9F04_RS17765;old_locus_tag=C9F04_18330
NZ_PYKF01000596.1	Protein Homology	CDS	761	2002	.	+	0	ID=cds-WP_146712965.1;Parent=gene-C9F04_RS17765;Dbxref=Genbank:WP_146712965.1;Name=WP_146712965.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9F04_RS17765;product=alanine transaminase;protein_id=WP_146712965.1;transl_table=11
NZ_PYKF01000596.1	RefSeq	gene	2052	2123	.	-	.	ID=gene-C9F04_RS17770;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9F04_RS17770;old_locus_tag=C9F04_18335
NZ_PYKF01000596.1	Protein Homology	CDS	2052	2123	.	-	0	ID=cds-WP_010723117.1;Parent=gene-C9F04_RS17770;Dbxref=Genbank:WP_010723117.1;Name=WP_010723117.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9F04_RS17770;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_PYKF01000596.1	RefSeq	gene	2526	3278	.	-	.	ID=gene-C9F04_RS17775;Name=lpxP;end_range=3278,.;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9F04_RS17775;old_locus_tag=C9F04_18340;partial=true
NZ_PYKF01000596.1	Protein Homology	CDS	2526	3278	.	-	0	ID=cds-WP_146712966.1;Parent=gene-C9F04_RS17775;Dbxref=Genbank:WP_146712966.1;Name=WP_146712966.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016021;end_range=3278,.;gbkey=CDS;gene=lpxP;go_component=integral component of membrane|0016021||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9F04_RS17775;partial=true;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_146712966.1;transl_table=11
##sequence-region NZ_PYKF01000715.1 1 3278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000715.1	RefSeq	region	1	3278	.	+	.	ID=NZ_PYKF01000715.1:1..3278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000715.1	RefSeq	pseudogene	52	459	.	-	.	ID=gene-C9F04_RS22160;Name=C9F04_RS22160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22160;old_locus_tag=C9F04_22895;partial=true;pseudo=true;start_range=.,52
NZ_PYKF01000715.1	Protein Homology	CDS	52	459	.	-	0	ID=cds-C9F04_RS22160;Parent=gene-C9F04_RS22160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9F04_RS22160;partial=true;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;start_range=.,52;transl_table=11
NZ_PYKF01000715.1	RefSeq	pseudogene	1053	3245	.	+	.	ID=gene-C9F04_RS22165;Name=malT;end_range=3245,.;gbkey=Gene;gene=malT;gene_biotype=pseudogene;locus_tag=C9F04_RS22165;old_locus_tag=C9F04_22900;partial=true;pseudo=true
NZ_PYKF01000715.1	Protein Homology	CDS	1053	3245	.	+	0	ID=cds-C9F04_RS22165;Parent=gene-C9F04_RS22165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0005515;end_range=3245,.;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F04_RS22165;partial=true;product=HTH-type transcriptional regulator MalT;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000622.1 1 17583
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000622.1	RefSeq	region	1	17583	.	+	.	ID=NZ_PYKF01000622.1:1..17583;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000622.1	RefSeq	gene	1	685	.	-	.	ID=gene-C9F04_RS18780;Name=C9F04_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18780;old_locus_tag=C9F04_19395;partial=true;start_range=.,1
NZ_PYKF01000622.1	Protein Homology	CDS	1	685	.	-	0	ID=cds-WP_186799056.1;Parent=gene-C9F04_RS18780;Dbxref=Genbank:WP_186799056.1;Name=WP_186799056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F04_RS18780;partial=true;product=inverse autotransporter beta domain-containing protein;protein_id=WP_186799056.1;start_range=.,1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	760	1605	.	-	.	ID=gene-C9F04_RS18785;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9F04_RS18785;old_locus_tag=C9F04_19400
NZ_PYKF01000622.1	Protein Homology	CDS	760	1605	.	-	0	ID=cds-WP_135420045.1;Parent=gene-C9F04_RS18785;Dbxref=Genbank:WP_135420045.1;Name=WP_135420045.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9F04_RS18785;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_135420045.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	1902	2759	.	+	.	ID=gene-C9F04_RS18790;Name=C9F04_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18790;old_locus_tag=C9F04_19405
NZ_PYKF01000622.1	Protein Homology	CDS	1902	2759	.	+	0	ID=cds-WP_010989022.1;Parent=gene-C9F04_RS18790;Dbxref=Genbank:WP_010989022.1;Name=WP_010989022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9F04_RS18790;product=GyrI-like domain-containing protein;protein_id=WP_010989022.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	3151	4260	.	+	.	ID=gene-C9F04_RS18795;Name=C9F04_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18795;old_locus_tag=C9F04_19410
NZ_PYKF01000622.1	Protein Homology	CDS	3151	4260	.	+	0	ID=cds-WP_135369577.1;Parent=gene-C9F04_RS18795;Dbxref=Genbank:WP_135369577.1;Name=WP_135369577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9F04_RS18795;product=hypothetical protein;protein_id=WP_135369577.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	4474	4710	.	-	.	ID=gene-C9F04_RS18800;Name=C9F04_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18800;old_locus_tag=C9F04_19415
NZ_PYKF01000622.1	Protein Homology	CDS	4474	4710	.	-	0	ID=cds-WP_001168016.1;Parent=gene-C9F04_RS18800;Dbxref=Genbank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9F04_RS18800;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	4839	5429	.	-	.	ID=gene-C9F04_RS18805;Name=C9F04_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18805;old_locus_tag=C9F04_19420
NZ_PYKF01000622.1	Protein Homology	CDS	4839	5429	.	-	0	ID=cds-WP_000208474.1;Parent=gene-C9F04_RS18805;Dbxref=Genbank:WP_000208474.1;Name=WP_000208474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9F04_RS18805;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	5507	6220	.	+	.	ID=gene-C9F04_RS18810;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9F04_RS18810;old_locus_tag=C9F04_19425
NZ_PYKF01000622.1	Protein Homology	CDS	5507	6220	.	+	0	ID=cds-WP_000979084.1;Parent=gene-C9F04_RS18810;Dbxref=Genbank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9F04_RS18810;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	6311	7180	.	-	.	ID=gene-C9F04_RS18815;Name=C9F04_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18815;old_locus_tag=C9F04_19430
NZ_PYKF01000622.1	Protein Homology	CDS	6311	7180	.	-	0	ID=cds-WP_000456775.1;Parent=gene-C9F04_RS18815;Dbxref=Genbank:WP_000456775.1;Name=WP_000456775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9F04_RS18815;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	7457	8362	.	-	.	ID=gene-C9F04_RS18820;Name=C9F04_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18820;old_locus_tag=C9F04_19435
NZ_PYKF01000622.1	Protein Homology	CDS	7457	8362	.	-	0	ID=cds-WP_146713012.1;Parent=gene-C9F04_RS18820;Dbxref=Genbank:WP_146713012.1;Name=WP_146713012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9F04_RS18820;product=LysR family transcriptional regulator;protein_id=WP_146713012.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	8481	9410	.	+	.	ID=gene-C9F04_RS18825;Name=C9F04_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18825;old_locus_tag=C9F04_19440
NZ_PYKF01000622.1	Protein Homology	CDS	8481	9410	.	+	0	ID=cds-WP_135369576.1;Parent=gene-C9F04_RS18825;Dbxref=Genbank:WP_135369576.1;Name=WP_135369576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9F04_RS18825;product=aromatic alcohol reductase;protein_id=WP_135369576.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	9898	11079	.	-	.	ID=gene-C9F04_RS18830;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9F04_RS18830;old_locus_tag=C9F04_19445
NZ_PYKF01000622.1	Protein Homology	CDS	9898	11079	.	-	0	ID=cds-WP_001066156.1;Parent=gene-C9F04_RS18830;Dbxref=Genbank:WP_001066156.1;Name=WP_001066156.1;Ontology_term=GO:0009086,GO:0004121;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284251.1;locus_tag=C9F04_RS18830;product=cystathionine beta-lyase;protein_id=WP_001066156.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	11106	12380	.	-	.	ID=gene-C9F04_RS18835;Name=C9F04_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18835;old_locus_tag=C9F04_19450
NZ_PYKF01000622.1	Protein Homology	CDS	11106	12380	.	-	0	ID=cds-WP_167850413.1;Parent=gene-C9F04_RS18835;Dbxref=Genbank:WP_167850413.1;Name=WP_167850413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295225.1;locus_tag=C9F04_RS18835;product=amino acid permease;protein_id=WP_167850413.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	12465	12851	.	-	.	ID=gene-C9F04_RS18840;Name=C9F04_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18840;old_locus_tag=C9F04_19455
NZ_PYKF01000622.1	Protein Homology	CDS	12465	12851	.	-	0	ID=cds-WP_000864437.1;Parent=gene-C9F04_RS18840;Dbxref=Genbank:WP_000864437.1;Name=WP_000864437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795758.1;locus_tag=C9F04_RS18840;product=RidA family protein;protein_id=WP_000864437.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	13169	14110	.	-	.	ID=gene-C9F04_RS18845;Name=C9F04_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18845;old_locus_tag=C9F04_19460
NZ_PYKF01000622.1	Protein Homology	CDS	13169	14110	.	-	0	ID=cds-WP_001537910.1;Parent=gene-C9F04_RS18845;Dbxref=Genbank:WP_001537910.1;Name=WP_001537910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137094.1;locus_tag=C9F04_RS18845;product=LysR family transcriptional regulator;protein_id=WP_001537910.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	14362	15285	.	+	.	ID=gene-C9F04_RS18850;Name=C9F04_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18850;old_locus_tag=C9F04_19465
NZ_PYKF01000622.1	Protein Homology	CDS	14362	15285	.	+	0	ID=cds-WP_001257182.1;Parent=gene-C9F04_RS18850;Dbxref=Genbank:WP_001257182.1;Name=WP_001257182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=C9F04_RS18850;product=LysR substrate-binding domain-containing protein;protein_id=WP_001257182.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	15638	15919	.	+	.	ID=gene-C9F04_RS18860;Name=C9F04_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18860;old_locus_tag=C9F04_19475
NZ_PYKF01000622.1	Protein Homology	CDS	15638	15919	.	+	0	ID=cds-WP_000323820.1;Parent=gene-C9F04_RS18860;Dbxref=Genbank:WP_000323820.1;Name=WP_000323820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=C9F04_RS18860;product=hypothetical protein;protein_id=WP_000323820.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	15954	16298	.	+	.	ID=gene-C9F04_RS18865;Name=C9F04_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18865;old_locus_tag=C9F04_19480
NZ_PYKF01000622.1	Protein Homology	CDS	15954	16298	.	+	0	ID=cds-WP_000950635.1;Parent=gene-C9F04_RS18865;Dbxref=Genbank:WP_000950635.1;Name=WP_000950635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=C9F04_RS18865;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000950635.1;transl_table=11
NZ_PYKF01000622.1	RefSeq	gene	16518	17583	.	-	.	ID=gene-C9F04_RS18870;Name=C9F04_RS18870;end_range=17583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18870;old_locus_tag=C9F04_19485;partial=true
NZ_PYKF01000622.1	Protein Homology	CDS	16518	17583	.	-	1	ID=cds-WP_146713013.1;Parent=gene-C9F04_RS18870;Dbxref=Genbank:WP_146713013.1;Name=WP_146713013.1;end_range=17583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216547.1;locus_tag=C9F04_RS18870;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_146713013.1;transl_table=11
##sequence-region NZ_PYKF01000253.1 1 3266
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000253.1	RefSeq	region	1	3266	.	+	.	ID=NZ_PYKF01000253.1:1..3266;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000253.1	RefSeq	pseudogene	1	168	.	-	.	ID=gene-C9F04_RS26945;Name=C9F04_RS26945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26945;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000253.1	Protein Homology	CDS	1	168	.	-	0	ID=cds-C9F04_RS26945;Parent=gene-C9F04_RS26945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F04_RS26945;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000253.1	RefSeq	gene	495	2144	.	+	.	ID=gene-C9F04_RS06980;Name=C9F04_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06980;old_locus_tag=C9F04_07195
NZ_PYKF01000253.1	Protein Homology	CDS	495	2144	.	+	0	ID=cds-WP_000934257.1;Parent=gene-C9F04_RS06980;Dbxref=Genbank:WP_000934257.1;Name=WP_000934257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9F04_RS06980;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11
NZ_PYKF01000253.1	RefSeq	gene	2157	3266	.	-	.	ID=gene-C9F04_RS06985;Name=C9F04_RS06985;end_range=3266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06985;old_locus_tag=C9F04_07200;partial=true
NZ_PYKF01000253.1	Protein Homology	CDS	2157	3266	.	-	0	ID=cds-WP_146712450.1;Parent=gene-C9F04_RS06985;Dbxref=Genbank:WP_146712450.1;Name=WP_146712450.1;end_range=3266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157702.1;locus_tag=C9F04_RS06985;partial=true;product=STY4199 family HEPN domain-containing protein;protein_id=WP_146712450.1;transl_table=11
##sequence-region NZ_PYKF01000127.1 1 3238
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000127.1	RefSeq	region	1	3238	.	+	.	ID=NZ_PYKF01000127.1:1..3238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000127.1	RefSeq	gene	1	1322	.	-	.	ID=gene-C9F04_RS02440;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=C9F04_RS02440;old_locus_tag=C9F04_02520;partial=true;start_range=.,1
NZ_PYKF01000127.1	Protein Homology	CDS	1	1322	.	-	0	ID=cds-WP_261770739.1;Parent=gene-C9F04_RS02440;Dbxref=Genbank:WP_261770739.1;Name=WP_261770739.1;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F04_RS02440;partial=true;product=propionate--CoA ligase;protein_id=WP_261770739.1;start_range=.,1;transl_table=11
NZ_PYKF01000127.1	RefSeq	gene	1363	2814	.	-	.	ID=gene-C9F04_RS02445;Name=C9F04_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02445;old_locus_tag=C9F04_02525
NZ_PYKF01000127.1	Protein Homology	CDS	1363	2814	.	-	0	ID=cds-WP_080105456.1;Parent=gene-C9F04_RS02445;Dbxref=Genbank:WP_080105456.1;Name=WP_080105456.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=C9F04_RS02445;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_080105456.1;transl_table=11
NZ_PYKF01000127.1	RefSeq	pseudogene	2852	3238	.	-	.	ID=gene-C9F04_RS02450;Name=C9F04_RS02450;end_range=3238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02450;old_locus_tag=C9F04_02530;partial=true;pseudo=true
NZ_PYKF01000127.1	Protein Homology	CDS	2852	3238	.	-	0	ID=cds-C9F04_RS02450;Parent=gene-C9F04_RS02450;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127933.1;locus_tag=C9F04_RS02450;partial=true;product=2-methylcitrate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000148.1 1 3237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000148.1	RefSeq	region	1	3237	.	+	.	ID=NZ_PYKF01000148.1:1..3237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000148.1	RefSeq	gene	1	926	.	-	.	ID=gene-C9F04_RS03110;Name=C9F04_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03110;old_locus_tag=C9F04_03210;partial=true;start_range=.,1
NZ_PYKF01000148.1	Protein Homology	CDS	1	926	.	-	0	ID=cds-WP_240776456.1;Parent=gene-C9F04_RS03110;Dbxref=Genbank:WP_240776456.1;Name=WP_240776456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835202.1;locus_tag=C9F04_RS03110;partial=true;product=phage tail protein;protein_id=WP_240776456.1;start_range=.,1;transl_table=11
NZ_PYKF01000148.1	RefSeq	gene	923	1528	.	-	.	ID=gene-C9F04_RS03115;Name=C9F04_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03115;old_locus_tag=C9F04_03215
NZ_PYKF01000148.1	Protein Homology	CDS	923	1528	.	-	0	ID=cds-WP_001086804.1;Parent=gene-C9F04_RS03115;Dbxref=Genbank:WP_001086804.1;Name=WP_001086804.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=C9F04_RS03115;product=phage tail protein I;protein_id=WP_001086804.1;transl_table=11
NZ_PYKF01000148.1	RefSeq	gene	1521	2429	.	-	.	ID=gene-C9F04_RS03120;Name=C9F04_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03120;old_locus_tag=C9F04_03220
NZ_PYKF01000148.1	Protein Homology	CDS	1521	2429	.	-	0	ID=cds-WP_000268273.1;Parent=gene-C9F04_RS03120;Dbxref=Genbank:WP_000268273.1;Name=WP_000268273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=C9F04_RS03120;product=baseplate assembly protein;protein_id=WP_000268273.1;transl_table=11
NZ_PYKF01000148.1	RefSeq	gene	2416	2775	.	-	.	ID=gene-C9F04_RS03125;Name=C9F04_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03125;old_locus_tag=C9F04_03225
NZ_PYKF01000148.1	Protein Homology	CDS	2416	2775	.	-	0	ID=cds-WP_000177484.1;Parent=gene-C9F04_RS03125;Dbxref=Genbank:WP_000177484.1;Name=WP_000177484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=C9F04_RS03125;product=GPW/gp25 family protein;protein_id=WP_000177484.1;transl_table=11
NZ_PYKF01000148.1	RefSeq	gene	2772	3237	.	-	.	ID=gene-C9F04_RS03130;Name=C9F04_RS03130;end_range=3237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03130;old_locus_tag=C9F04_03230;partial=true
NZ_PYKF01000148.1	Protein Homology	CDS	2772	3237	.	-	1	ID=cds-WP_146712279.1;Parent=gene-C9F04_RS03130;Dbxref=Genbank:WP_146712279.1;Name=WP_146712279.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=3237,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=C9F04_RS03130;partial=true;product=phage baseplate assembly protein V;protein_id=WP_146712279.1;transl_table=11
##sequence-region NZ_PYKF01000209.1 1 3217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000209.1	RefSeq	region	1	3217	.	+	.	ID=NZ_PYKF01000209.1:1..3217;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000209.1	RefSeq	gene	1	485	.	-	.	ID=gene-C9F04_RS05110;Name=C9F04_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05110;old_locus_tag=C9F04_05275;partial=true;start_range=.,1
NZ_PYKF01000209.1	Protein Homology	CDS	1	485	.	-	0	ID=cds-WP_146712372.1;Parent=gene-C9F04_RS05110;Dbxref=Genbank:WP_146712372.1;Name=WP_146712372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F04_RS05110;partial=true;product=YicC family protein;protein_id=WP_146712372.1;start_range=.,1;transl_table=11
NZ_PYKF01000209.1	RefSeq	gene	611	1327	.	+	.	ID=gene-C9F04_RS05115;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9F04_RS05115;old_locus_tag=C9F04_05285
NZ_PYKF01000209.1	Protein Homology	CDS	611	1327	.	+	0	ID=cds-WP_001247078.1;Parent=gene-C9F04_RS05115;Dbxref=Genbank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9F04_RS05115;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11
NZ_PYKF01000209.1	RefSeq	gene	1406	2047	.	+	.	ID=gene-C9F04_RS05120;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9F04_RS05120;old_locus_tag=C9F04_05290
NZ_PYKF01000209.1	Protein Homology	CDS	1406	2047	.	+	0	ID=cds-WP_000806167.1;Parent=gene-C9F04_RS05120;Dbxref=Genbank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9F04_RS05120;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11
NZ_PYKF01000209.1	RefSeq	gene	2125	2721	.	-	.	ID=gene-C9F04_RS05125;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9F04_RS05125;old_locus_tag=C9F04_05295
NZ_PYKF01000209.1	Protein Homology	CDS	2125	2721	.	-	0	ID=cds-WP_000818607.1;Parent=gene-C9F04_RS05125;Dbxref=Genbank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9F04_RS05125;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11
NZ_PYKF01000209.1	RefSeq	gene	2829	3217	.	-	.	ID=gene-C9F04_RS05130;Name=dut;end_range=3217,.;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9F04_RS05130;old_locus_tag=C9F04_05300;partial=true
NZ_PYKF01000209.1	Protein Homology	CDS	2829	3217	.	-	2	ID=cds-WP_146712373.1;Parent=gene-C9F04_RS05130;Dbxref=Genbank:WP_146712373.1;Name=WP_146712373.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;end_range=3217,.;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9F04_RS05130;partial=true;product=dUTP diphosphatase;protein_id=WP_146712373.1;transl_table=11
##sequence-region NZ_PYKF01000528.1 1 3186
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000528.1	RefSeq	region	1	3186	.	+	.	ID=NZ_PYKF01000528.1:1..3186;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000528.1	RefSeq	pseudogene	1	215	.	+	.	ID=gene-C9F04_RS15825;Name=C9F04_RS15825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15825;old_locus_tag=C9F04_16310;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000528.1	Protein Homology	CDS	1	215	.	+	2	ID=cds-C9F04_RS15825;Parent=gene-C9F04_RS15825;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9F04_RS15825;partial=true;product=Bcr/CflA family multidrug efflux transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000528.1	RefSeq	gene	606	950	.	+	.	ID=gene-C9F04_RS15830;Name=C9F04_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15830;old_locus_tag=C9F04_16320
NZ_PYKF01000528.1	Protein Homology	CDS	606	950	.	+	0	ID=cds-WP_001094639.1;Parent=gene-C9F04_RS15830;Dbxref=Genbank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9F04_RS15830;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11
NZ_PYKF01000528.1	RefSeq	gene	954	1712	.	-	.	ID=gene-C9F04_RS27115;Name=C9F04_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27115
NZ_PYKF01000528.1	Protein Homology	CDS	954	1712	.	-	0	ID=cds-WP_261771273.1;Parent=gene-C9F04_RS27115;Dbxref=Genbank:WP_261771273.1;Name=WP_261771273.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=C9F04_RS27115;product=ATP-binding cassette domain-containing protein;protein_id=WP_261771273.1;transl_table=11
NZ_PYKF01000528.1	RefSeq	gene	1648	1842	.	-	.	ID=gene-C9F04_RS27120;Name=C9F04_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27120
NZ_PYKF01000528.1	Protein Homology	CDS	1648	1842	.	-	0	ID=cds-WP_234355113.1;Parent=gene-C9F04_RS27120;Dbxref=Genbank:WP_234355113.1;Name=WP_234355113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019951.2;locus_tag=C9F04_RS27120;product=hypothetical protein;protein_id=WP_234355113.1;transl_table=11
NZ_PYKF01000528.1	RefSeq	pseudogene	1818	2543	.	-	.	ID=gene-C9F04_RS27125;Name=C9F04_RS27125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27125;partial=true;pseudo=true;start_range=.,1818
NZ_PYKF01000528.1	Protein Homology	CDS	1818	2543	.	-	0	ID=cds-C9F04_RS27125;Parent=gene-C9F04_RS27125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=C9F04_RS27125;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1818;transl_table=11
NZ_PYKF01000528.1	RefSeq	gene	2545	3186	.	-	.	ID=gene-C9F04_RS15840;Name=C9F04_RS15840;end_range=3186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15840;old_locus_tag=C9F04_16330;partial=true
NZ_PYKF01000528.1	Protein Homology	CDS	2545	3186	.	-	0	ID=cds-WP_146712858.1;Parent=gene-C9F04_RS15840;Dbxref=Genbank:WP_146712858.1;Name=WP_146712858.1;Ontology_term=GO:0055085;end_range=3186,.;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9F04_RS15840;partial=true;product=microcin C ABC transporter permease;protein_id=WP_146712858.1;transl_table=11
##sequence-region NZ_PYKF01000433.1 1 3180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000433.1	RefSeq	region	1	3180	.	+	.	ID=NZ_PYKF01000433.1:1..3180;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000433.1	RefSeq	gene	75	182	.	-	.	ID=gene-C9F04_RS13035;Name=C9F04_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13035;old_locus_tag=C9F04_13465
NZ_PYKF01000433.1	Protein Homology	CDS	75	182	.	-	0	ID=cds-WP_000272239.1;Parent=gene-C9F04_RS13035;Dbxref=Genbank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9F04_RS13035;product=hypothetical protein;protein_id=WP_000272239.1;transl_table=11
NZ_PYKF01000433.1	RefSeq	gene	388	834	.	+	.	ID=gene-C9F04_RS13040;Name=C9F04_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13040;old_locus_tag=C9F04_13470
NZ_PYKF01000433.1	Protein Homology	CDS	388	834	.	+	0	ID=cds-WP_000460698.1;Parent=gene-C9F04_RS13040;Dbxref=Genbank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9F04_RS13040;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11
NZ_PYKF01000433.1	RefSeq	gene	814	1608	.	-	.	ID=gene-C9F04_RS13045;Name=C9F04_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13045;old_locus_tag=C9F04_13475
NZ_PYKF01000433.1	Protein Homology	CDS	814	1608	.	-	0	ID=cds-WP_000579793.1;Parent=gene-C9F04_RS13045;Dbxref=Genbank:WP_000579793.1;Name=WP_000579793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9F04_RS13045;product=helix-turn-helix transcriptional regulator;protein_id=WP_000579793.1;transl_table=11
NZ_PYKF01000433.1	RefSeq	gene	1709	2893	.	+	.	ID=gene-C9F04_RS13050;Name=C9F04_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13050;old_locus_tag=C9F04_13480
NZ_PYKF01000433.1	Protein Homology	CDS	1709	2893	.	+	0	ID=cds-WP_000205341.1;Parent=gene-C9F04_RS13050;Dbxref=Genbank:WP_000205341.1;Name=WP_000205341.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9F04_RS13050;product=CynX/NimT family MFS transporter;protein_id=WP_000205341.1;transl_table=11
NZ_PYKF01000433.1	RefSeq	gene	3014	3180	.	+	.	ID=gene-C9F04_RS13055;Name=C9F04_RS13055;end_range=3180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13055;old_locus_tag=C9F04_13485;partial=true
NZ_PYKF01000433.1	Protein Homology	CDS	3014	3180	.	+	0	ID=cds-WP_146712733.1;Parent=gene-C9F04_RS13055;Dbxref=Genbank:WP_146712733.1;Name=WP_146712733.1;end_range=3180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9F04_RS13055;partial=true;product=DUF488 family protein;protein_id=WP_146712733.1;transl_table=11
##sequence-region NZ_PYKF01000762.1 1 3175
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000762.1	RefSeq	region	1	3175	.	+	.	ID=NZ_PYKF01000762.1:1..3175;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000762.1	RefSeq	pseudogene	1	575	.	+	.	ID=gene-C9F04_RS23705;Name=C9F04_RS23705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23705;old_locus_tag=C9F04_24500;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000762.1	Protein Homology	CDS	1	575	.	+	2	ID=cds-C9F04_RS23705;Parent=gene-C9F04_RS23705;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9F04_RS23705;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000762.1	RefSeq	gene	739	1017	.	+	.	ID=gene-C9F04_RS23710;Name=C9F04_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23710;old_locus_tag=C9F04_24505
NZ_PYKF01000762.1	Protein Homology	CDS	739	1017	.	+	0	ID=cds-WP_000621260.1;Parent=gene-C9F04_RS23710;Dbxref=Genbank:WP_000621260.1;Name=WP_000621260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=C9F04_RS23710;product=hypothetical protein;protein_id=WP_000621260.1;transl_table=11
NZ_PYKF01000762.1	RefSeq	gene	1250	2566	.	+	.	ID=gene-C9F04_RS23715;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9F04_RS23715;old_locus_tag=C9F04_24510
NZ_PYKF01000762.1	Protein Homology	CDS	1250	2566	.	+	0	ID=cds-WP_000624747.1;Parent=gene-C9F04_RS23715;Dbxref=Genbank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9F04_RS23715;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11
NZ_PYKF01000762.1	RefSeq	gene	2671	3175	.	+	.	ID=gene-C9F04_RS23720;Name=ugpA;end_range=3175,.;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9F04_RS23720;old_locus_tag=C9F04_24515;partial=true
NZ_PYKF01000762.1	Protein Homology	CDS	2671	3175	.	+	0	ID=cds-WP_146713267.1;Parent=gene-C9F04_RS23720;Dbxref=Genbank:WP_146713267.1;Name=WP_146713267.1;end_range=3175,.;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F04_RS23720;partial=true;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_146713267.1;transl_table=11
##sequence-region NZ_PYKF01000724.1 1 3157
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000724.1	RefSeq	region	1	3157	.	+	.	ID=NZ_PYKF01000724.1:1..3157;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000724.1	RefSeq	gene	1	1521	.	-	.	ID=gene-C9F04_RS22470;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9F04_RS22470;old_locus_tag=C9F04_23215;partial=true;start_range=.,1
NZ_PYKF01000724.1	Protein Homology	CDS	1	1521	.	-	0	ID=cds-WP_146713201.1;Parent=gene-C9F04_RS22470;Dbxref=Genbank:WP_146713201.1;Name=WP_146713201.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F04_RS22470;partial=true;product=hydroxylamine reductase;protein_id=WP_146713201.1;start_range=.,1;transl_table=11
NZ_PYKF01000724.1	RefSeq	gene	1665	2564	.	-	.	ID=gene-C9F04_RS22475;Name=C9F04_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22475;old_locus_tag=C9F04_23225
NZ_PYKF01000724.1	Protein Homology	CDS	1665	2564	.	-	0	ID=cds-WP_135369247.1;Parent=gene-C9F04_RS22475;Dbxref=Genbank:WP_135369247.1;Name=WP_135369247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9F04_RS22475;product=lysine exporter LysO family protein;protein_id=WP_135369247.1;transl_table=11
NZ_PYKF01000724.1	RefSeq	pseudogene	2766	3098	.	+	.	ID=gene-C9F04_RS22480;Name=C9F04_RS22480;end_range=3098,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22480;old_locus_tag=C9F04_23235;partial=true;pseudo=true
NZ_PYKF01000724.1	Protein Homology	CDS	2766	3098	.	+	0	ID=cds-C9F04_RS22480;Parent=gene-C9F04_RS22480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F04_RS22480;partial=true;product=YjbD family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000277.1 1 3118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000277.1	RefSeq	region	1	3118	.	+	.	ID=NZ_PYKF01000277.1:1..3118;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000277.1	RefSeq	pseudogene	1	627	.	+	.	ID=gene-C9F04_RS07710;Name=C9F04_RS07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07710;old_locus_tag=C9F04_07970;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000277.1	Protein Homology	CDS	1	627	.	+	0	ID=cds-C9F04_RS07710;Parent=gene-C9F04_RS07710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F04_RS07710;partial=true;product=FtsX-like permease family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000277.1	RefSeq	gene	814	1947	.	+	.	ID=gene-C9F04_RS07715;Name=C9F04_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07715;old_locus_tag=C9F04_07975
NZ_PYKF01000277.1	Protein Homology	CDS	814	1947	.	+	0	ID=cds-WP_079801861.1;Parent=gene-C9F04_RS07715;Dbxref=Genbank:WP_079801861.1;Name=WP_079801861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9F04_RS07715;product=porin;protein_id=WP_079801861.1;transl_table=11
NZ_PYKF01000277.1	RefSeq	gene	2204	3034	.	+	.	ID=gene-C9F04_RS07720;Name=C9F04_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07720;old_locus_tag=C9F04_07980
NZ_PYKF01000277.1	Protein Homology	CDS	2204	3034	.	+	0	ID=cds-WP_146712484.1;Parent=gene-C9F04_RS07720;Dbxref=Genbank:WP_146712484.1;Name=WP_146712484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9F04_RS07720;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_146712484.1;transl_table=11
##sequence-region NZ_PYKF01000726.1 1 3109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000726.1	RefSeq	region	1	3109	.	+	.	ID=NZ_PYKF01000726.1:1..3109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000726.1	RefSeq	gene	1	433	.	+	.	ID=gene-C9F04_RS27245;Name=C9F04_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27245;old_locus_tag=C9F04_23250;partial=true;start_range=.,1
NZ_PYKF01000726.1	Protein Homology	CDS	1	433	.	+	1	ID=cds-WP_261771472.1;Parent=gene-C9F04_RS27245;Dbxref=Genbank:WP_261771472.1;Name=WP_261771472.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9F04_RS27245;partial=true;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_261771472.1;start_range=.,1;transl_table=11
NZ_PYKF01000726.1	RefSeq	gene	433	1935	.	+	.	ID=gene-C9F04_RS22500;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9F04_RS22500;old_locus_tag=C9F04_23255
NZ_PYKF01000726.1	Protein Homology	CDS	433	1935	.	+	0	ID=cds-WP_001091257.1;Parent=gene-C9F04_RS22500;Dbxref=Genbank:WP_001091257.1;Name=WP_001091257.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9F04_RS22500;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091257.1;transl_table=11
NZ_PYKF01000726.1	RefSeq	gene	1945	3109	.	+	.	ID=gene-C9F04_RS22505;Name=uhpC;end_range=3109,.;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=C9F04_RS22505;old_locus_tag=C9F04_23260;partial=true
NZ_PYKF01000726.1	Protein Homology	CDS	1945	3109	.	+	0	ID=cds-WP_146713204.1;Parent=gene-C9F04_RS22505;Dbxref=Genbank:WP_146713204.1;Name=WP_146713204.1;Ontology_term=GO:0055085,GO:0022857;end_range=3109,.;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312631.2;locus_tag=C9F04_RS22505;partial=true;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_146713204.1;transl_table=11
##sequence-region NZ_PYKF01000414.1 1 17550
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000414.1	RefSeq	region	1	17550	.	+	.	ID=NZ_PYKF01000414.1:1..17550;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000414.1	RefSeq	gene	1	249	.	+	.	ID=gene-C9F04_RS12260;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9F04_RS12260;old_locus_tag=C9F04_12675;partial=true;start_range=.,1
NZ_PYKF01000414.1	Protein Homology	CDS	1	249	.	+	0	ID=cds-WP_261771025.1;Parent=gene-C9F04_RS12260;Dbxref=Genbank:WP_261771025.1;Name=WP_261771025.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225398.1;locus_tag=C9F04_RS12260;partial=true;product=preprotein translocase subunit YajC;protein_id=WP_261771025.1;start_range=.,1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	277	2124	.	+	.	ID=gene-C9F04_RS12265;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9F04_RS12265;old_locus_tag=C9F04_12680
NZ_PYKF01000414.1	Protein Homology	CDS	277	2124	.	+	0	ID=cds-WP_000934811.1;Parent=gene-C9F04_RS12265;Dbxref=Genbank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9F04_RS12265;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	2135	3106	.	+	.	ID=gene-C9F04_RS12270;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9F04_RS12270;old_locus_tag=C9F04_12685
NZ_PYKF01000414.1	Protein Homology	CDS	2135	3106	.	+	0	ID=cds-WP_000046629.1;Parent=gene-C9F04_RS12270;Dbxref=Genbank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9F04_RS12270;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	3200	3547	.	+	.	ID=gene-C9F04_RS12275;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9F04_RS12275;old_locus_tag=C9F04_12690
NZ_PYKF01000414.1	Protein Homology	CDS	3200	3547	.	+	0	ID=cds-WP_000974818.1;Parent=gene-C9F04_RS12275;Dbxref=Genbank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9F04_RS12275;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	3985	4092	.	+	.	ID=gene-C9F04_RS12285;Name=C9F04_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12285
NZ_PYKF01000414.1	Protein Homology	CDS	3985	4092	.	+	0	ID=cds-WP_000176312.1;Parent=gene-C9F04_RS12285;Dbxref=Genbank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9F04_RS12285;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	4176	5039	.	-	.	ID=gene-C9F04_RS12290;Name=C9F04_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12290;old_locus_tag=C9F04_12705
NZ_PYKF01000414.1	Protein Homology	CDS	4176	5039	.	-	0	ID=cds-WP_079987331.1;Parent=gene-C9F04_RS12290;Dbxref=Genbank:WP_079987331.1;Name=WP_079987331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9F04_RS12290;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_079987331.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	5339	5878	.	-	.	ID=gene-C9F04_RS12295;Name=C9F04_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12295;old_locus_tag=C9F04_12710
NZ_PYKF01000414.1	Protein Homology	CDS	5339	5878	.	-	0	ID=cds-WP_000198484.1;Parent=gene-C9F04_RS12295;Dbxref=Genbank:WP_000198484.1;Name=WP_000198484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9F04_RS12295;product=DUF3251 domain-containing protein;protein_id=WP_000198484.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	6030	6479	.	+	.	ID=gene-C9F04_RS12300;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9F04_RS12300;old_locus_tag=C9F04_12715
NZ_PYKF01000414.1	Protein Homology	CDS	6030	6479	.	+	0	ID=cds-WP_000543533.1;Parent=gene-C9F04_RS12300;Dbxref=Genbank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9F04_RS12300;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	6483	7586	.	+	.	ID=gene-C9F04_RS12305;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9F04_RS12305;old_locus_tag=C9F04_12720
NZ_PYKF01000414.1	Protein Homology	CDS	6483	7586	.	+	0	ID=cds-WP_001150216.1;Parent=gene-C9F04_RS12305;Dbxref=Genbank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9F04_RS12305;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	7675	8145	.	+	.	ID=gene-C9F04_RS12310;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=C9F04_RS12310;old_locus_tag=C9F04_12725
NZ_PYKF01000414.1	Protein Homology	CDS	7675	8145	.	+	0	ID=cds-WP_146712688.1;Parent=gene-C9F04_RS12310;Dbxref=Genbank:WP_146712688.1;Name=WP_146712688.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9F04_RS12310;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_146712688.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	8166	8585	.	+	.	ID=gene-C9F04_RS12315;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9F04_RS12315;old_locus_tag=C9F04_12730
NZ_PYKF01000414.1	Protein Homology	CDS	8166	8585	.	+	0	ID=cds-WP_000801129.1;Parent=gene-C9F04_RS12315;Dbxref=Genbank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9F04_RS12315;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	8664	9644	.	+	.	ID=gene-C9F04_RS12320;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9F04_RS12320;old_locus_tag=C9F04_12735
NZ_PYKF01000414.1	Protein Homology	CDS	8664	9644	.	+	0	ID=cds-WP_000742082.1;Parent=gene-C9F04_RS12320;Dbxref=Genbank:WP_000742082.1;Name=WP_000742082.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9F04_RS12320;product=thiamine-phosphate kinase;protein_id=WP_000742082.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	9622	10137	.	+	.	ID=gene-C9F04_RS12325;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9F04_RS12325;old_locus_tag=C9F04_12740
NZ_PYKF01000414.1	Protein Homology	CDS	9622	10137	.	+	0	ID=cds-WP_000154063.1;Parent=gene-C9F04_RS12325;Dbxref=Genbank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9F04_RS12325;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	10241	11215	.	-	.	ID=gene-C9F04_RS12330;Name=C9F04_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12330;old_locus_tag=C9F04_12745
NZ_PYKF01000414.1	Protein Homology	CDS	10241	11215	.	-	0	ID=cds-WP_001199858.1;Parent=gene-C9F04_RS12330;Dbxref=Genbank:WP_001199858.1;Name=WP_001199858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9F04_RS12330;product=aldo/keto reductase;protein_id=WP_001199858.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	11272	13134	.	-	.	ID=gene-C9F04_RS12335;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9F04_RS12335;old_locus_tag=C9F04_12750
NZ_PYKF01000414.1	Protein Homology	CDS	11272	13134	.	-	0	ID=cds-WP_146712689.1;Parent=gene-C9F04_RS12335;Dbxref=Genbank:WP_146712689.1;Name=WP_146712689.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9F04_RS12335;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_146712689.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	13158	14057	.	-	.	ID=gene-C9F04_RS12340;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9F04_RS12340;old_locus_tag=C9F04_12755
NZ_PYKF01000414.1	Protein Homology	CDS	13158	14057	.	-	0	ID=cds-WP_000348074.1;Parent=gene-C9F04_RS12340;Dbxref=Genbank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9F04_RS12340;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	14058	14300	.	-	.	ID=gene-C9F04_RS12345;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9F04_RS12345;old_locus_tag=C9F04_12760
NZ_PYKF01000414.1	Protein Homology	CDS	14058	14300	.	-	0	ID=cds-WP_001124944.1;Parent=gene-C9F04_RS12345;Dbxref=Genbank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9F04_RS12345;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	14510	15958	.	+	.	ID=gene-C9F04_RS12350;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9F04_RS12350;old_locus_tag=C9F04_12765
NZ_PYKF01000414.1	Protein Homology	CDS	14510	15958	.	+	0	ID=cds-WP_146712690.1;Parent=gene-C9F04_RS12350;Dbxref=Genbank:WP_146712690.1;Name=WP_146712690.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9F04_RS12350;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_146712690.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	16002	16799	.	-	.	ID=gene-C9F04_RS12355;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9F04_RS12355;old_locus_tag=C9F04_12770
NZ_PYKF01000414.1	Protein Homology	CDS	16002	16799	.	-	0	ID=cds-WP_000909791.1;Parent=gene-C9F04_RS12355;Dbxref=Genbank:WP_000909791.1;Name=WP_000909791.1;Ontology_term=GO:0033223,GO:0033225,GO:0005887,GO:0055052;gbkey=CDS;gene=phnV;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F04_RS12355;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909791.1;transl_table=11
NZ_PYKF01000414.1	RefSeq	gene	16802	17550	.	-	.	ID=gene-C9F04_RS12360;Name=phnU;end_range=17550,.;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9F04_RS12360;old_locus_tag=C9F04_12775;partial=true
NZ_PYKF01000414.1	Protein Homology	CDS	16802	17550	.	-	2	ID=cds-WP_146712691.1;Parent=gene-C9F04_RS12360;Dbxref=Genbank:WP_146712691.1;Name=WP_146712691.1;Ontology_term=GO:0033223,GO:0033225,GO:0005887,GO:0055052;end_range=17550,.;gbkey=CDS;gene=phnU;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F04_RS12360;partial=true;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_146712691.1;transl_table=11
##sequence-region NZ_PYKF01000841.1 1 3092
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000841.1	RefSeq	region	1	3092	.	+	.	ID=NZ_PYKF01000841.1:1..3092;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000841.1	RefSeq	pseudogene	70	1455	.	-	.	ID=gene-C9F04_RS26490;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=pseudogene;locus_tag=C9F04_RS26490;old_locus_tag=C9F04_27405;partial=true;pseudo=true;start_range=.,70
NZ_PYKF01000841.1	Protein Homology	CDS	70	1455	.	-	0	ID=cds-C9F04_RS26490;Parent=gene-C9F04_RS26490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9F04_RS26490;partial=true;product=virulence-associated effector SrfC;pseudo=true;start_range=.,70;transl_table=11
NZ_PYKF01000841.1	RefSeq	gene	1452	3092	.	-	.	ID=gene-C9F04_RS26495;Name=C9F04_RS26495;end_range=3092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26495;old_locus_tag=C9F04_27410;partial=true
NZ_PYKF01000841.1	Protein Homology	CDS	1452	3092	.	-	0	ID=cds-WP_146713394.1;Parent=gene-C9F04_RS26495;Dbxref=Genbank:WP_146713394.1;Name=WP_146713394.1;end_range=3092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124839.1;locus_tag=C9F04_RS26495;partial=true;product=virulence factor SrfB;protein_id=WP_146713394.1;transl_table=11
##sequence-region NZ_PYKF01000740.1 1 3091
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000740.1	RefSeq	region	1	3091	.	+	.	ID=NZ_PYKF01000740.1:1..3091;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000740.1	RefSeq	gene	1	1089	.	+	.	ID=gene-C9F04_RS22995;Name=C9F04_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22995;old_locus_tag=C9F04_23765;partial=true;start_range=.,1
NZ_PYKF01000740.1	Protein Homology	CDS	1	1089	.	+	0	ID=cds-WP_186799084.1;Parent=gene-C9F04_RS22995;Dbxref=Genbank:WP_186799084.1;Name=WP_186799084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9F04_RS22995;partial=true;product=glucarate dehydratase;protein_id=WP_186799084.1;start_range=.,1;transl_table=11
NZ_PYKF01000740.1	RefSeq	gene	1110	2450	.	+	.	ID=gene-C9F04_RS23000;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9F04_RS23000;old_locus_tag=C9F04_23770
NZ_PYKF01000740.1	Protein Homology	CDS	1110	2450	.	+	0	ID=cds-WP_000107113.1;Parent=gene-C9F04_RS23000;Dbxref=Genbank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9F04_RS23000;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11
NZ_PYKF01000740.1	RefSeq	gene	2528	3091	.	+	.	ID=gene-C9F04_RS23005;Name=C9F04_RS23005;end_range=3091,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23005;old_locus_tag=C9F04_23775;partial=true
NZ_PYKF01000740.1	Protein Homology	CDS	2528	3091	.	+	0	ID=cds-WP_146713233.1;Parent=gene-C9F04_RS23005;Dbxref=Genbank:WP_146713233.1;Name=WP_146713233.1;Ontology_term=GO:0031388,GO:0008887;end_range=3091,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9F04_RS23005;partial=true;product=glycerate kinase;protein_id=WP_146713233.1;transl_table=11
##sequence-region NZ_PYKF01000105.1 1 3041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000105.1	RefSeq	region	1	3041	.	+	.	ID=NZ_PYKF01000105.1:1..3041;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000105.1	RefSeq	gene	51	905	.	+	.	ID=gene-C9F04_RS02015;Name=C9F04_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02015;old_locus_tag=C9F04_02100
NZ_PYKF01000105.1	Protein Homology	CDS	51	905	.	+	0	ID=cds-WP_135369114.1;Parent=gene-C9F04_RS02015;Dbxref=Genbank:WP_135369114.1;Name=WP_135369114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9F04_RS02015;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_135369114.1;transl_table=11
NZ_PYKF01000105.1	RefSeq	gene	948	1562	.	+	.	ID=gene-C9F04_RS02020;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9F04_RS02020;old_locus_tag=C9F04_02105
NZ_PYKF01000105.1	Protein Homology	CDS	948	1562	.	+	0	ID=cds-WP_000206562.1;Parent=gene-C9F04_RS02020;Dbxref=Genbank:WP_000206562.1;Name=WP_000206562.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9F04_RS02020;product=Tat proofreading chaperone DmsD;protein_id=WP_000206562.1;transl_table=11
NZ_PYKF01000105.1	RefSeq	gene	1867	2577	.	+	.	ID=gene-C9F04_RS02025;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F04_RS02025;old_locus_tag=C9F04_02110
NZ_PYKF01000105.1	Protein Homology	CDS	1867	2577	.	+	0	ID=cds-WP_135369115.1;Parent=gene-C9F04_RS02025;Dbxref=Genbank:WP_135369115.1;Name=WP_135369115.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9F04_RS02025;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_135369115.1;transl_table=11
NZ_PYKF01000105.1	RefSeq	pseudogene	2606	3041	.	+	.	ID=gene-C9F04_RS02030;Name=osmX;end_range=3041,.;gbkey=Gene;gene=osmX;gene_biotype=pseudogene;locus_tag=C9F04_RS02030;old_locus_tag=C9F04_02115;partial=true;pseudo=true
NZ_PYKF01000105.1	Protein Homology	CDS	2606	3041	.	+	0	ID=cds-C9F04_RS02030;Parent=gene-C9F04_RS02030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3041,.;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9F04_RS02030;partial=true;product=osmoprotectant ABC transporter substrate-binding protein OsmX;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000474.1 1 3077
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000474.1	RefSeq	region	1	3077	.	+	.	ID=NZ_PYKF01000474.1:1..3077;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000474.1	RefSeq	gene	102	737	.	-	.	ID=gene-C9F04_RS14220;Name=C9F04_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14220;old_locus_tag=C9F04_14680
NZ_PYKF01000474.1	Protein Homology	CDS	102	737	.	-	0	ID=cds-WP_135369469.1;Parent=gene-C9F04_RS14220;Dbxref=Genbank:WP_135369469.1;Name=WP_135369469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584170.1;locus_tag=C9F04_RS14220;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_135369469.1;transl_table=11
NZ_PYKF01000474.1	RefSeq	gene	1303	1608	.	+	.	ID=gene-C9F04_RS14225;Name=C9F04_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14225;old_locus_tag=C9F04_14685
NZ_PYKF01000474.1	Protein Homology	CDS	1303	1608	.	+	0	ID=cds-WP_135369468.1;Parent=gene-C9F04_RS14225;Dbxref=Genbank:WP_135369468.1;Name=WP_135369468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917096.1;locus_tag=C9F04_RS14225;product=hypothetical protein;protein_id=WP_135369468.1;transl_table=11
NZ_PYKF01000474.1	RefSeq	gene	1962	2675	.	+	.	ID=gene-C9F04_RS14230;Name=C9F04_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14230;old_locus_tag=C9F04_14690
NZ_PYKF01000474.1	Protein Homology	CDS	1962	2675	.	+	0	ID=cds-WP_146712790.1;Parent=gene-C9F04_RS14230;Dbxref=Genbank:WP_146712790.1;Name=WP_146712790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417123.1;locus_tag=C9F04_RS14230;product=WYL domain-containing protein;protein_id=WP_146712790.1;transl_table=11
NZ_PYKF01000474.1	RefSeq	gene	2748	2894	.	+	.	ID=gene-C9F04_RS26620;Name=C9F04_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26620
NZ_PYKF01000474.1	Protein Homology	CDS	2748	2894	.	+	0	ID=cds-WP_023892166.1;Parent=gene-C9F04_RS26620;Dbxref=Genbank:WP_023892166.1;Name=WP_023892166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383016.1;locus_tag=C9F04_RS26620;product=hypothetical protein;protein_id=WP_023892166.1;transl_table=11
##sequence-region NZ_PYKF01000405.1 1 3025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000405.1	RefSeq	region	1	3025	.	+	.	ID=NZ_PYKF01000405.1:1..3025;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000405.1	RefSeq	pseudogene	39	728	.	+	.	ID=gene-C9F04_RS12015;Name=C9F04_RS12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12015;old_locus_tag=C9F04_12430;partial=true;pseudo=true;start_range=.,39
NZ_PYKF01000405.1	Protein Homology	CDS	39	728	.	+	0	ID=cds-C9F04_RS12015;Parent=gene-C9F04_RS12015;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9F04_RS12015;partial=true;product=trimethylamine-N-oxide reductase TorA;pseudo=true;start_range=.,39;transl_table=11
NZ_PYKF01000405.1	RefSeq	gene	721	1353	.	+	.	ID=gene-C9F04_RS12020;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9F04_RS12020;old_locus_tag=C9F04_12435
NZ_PYKF01000405.1	Protein Homology	CDS	721	1353	.	+	0	ID=cds-WP_000595416.1;Parent=gene-C9F04_RS12020;Dbxref=Genbank:WP_000595416.1;Name=WP_000595416.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9F04_RS12020;product=molecular chaperone TorD;protein_id=WP_000595416.1;transl_table=11
NZ_PYKF01000405.1	RefSeq	gene	1543	2943	.	+	.	ID=gene-C9F04_RS12025;Name=C9F04_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12025;old_locus_tag=C9F04_12440
NZ_PYKF01000405.1	Protein Homology	CDS	1543	2943	.	+	0	ID=cds-WP_146712680.1;Parent=gene-C9F04_RS12025;Dbxref=Genbank:WP_146712680.1;Name=WP_146712680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9F04_RS12025;product=cytochrome-c peroxidase;protein_id=WP_146712680.1;transl_table=11
NZ_PYKF01000405.1	RefSeq	pseudogene	2949	3025	.	+	.	ID=gene-C9F04_RS12030;Name=C9F04_RS12030;end_range=3025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12030;old_locus_tag=C9F04_12445;partial=true;pseudo=true
NZ_PYKF01000405.1	Protein Homology	CDS	2949	3025	.	+	0	ID=cds-C9F04_RS12030;Parent=gene-C9F04_RS12030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F04_RS12030;partial=true;product=heme ABC transporter ATP-binding protein CcmA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000591.1 1 3062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000591.1	RefSeq	region	1	3062	.	+	.	ID=NZ_PYKF01000591.1:1..3062;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000591.1	RefSeq	gene	1	661	.	-	.	ID=gene-C9F04_RS17585;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9F04_RS17585;old_locus_tag=C9F04_18145;partial=true;start_range=.,1
NZ_PYKF01000591.1	Protein Homology	CDS	1	661	.	-	0	ID=cds-WP_146712955.1;Parent=gene-C9F04_RS17585;Dbxref=Genbank:WP_146712955.1;Name=WP_146712955.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9F04_RS17585;partial=true;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_146712955.1;start_range=.,1;transl_table=11
NZ_PYKF01000591.1	RefSeq	gene	658	1413	.	-	.	ID=gene-C9F04_RS17590;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9F04_RS17590;old_locus_tag=C9F04_18150
NZ_PYKF01000591.1	Protein Homology	CDS	658	1413	.	-	0	ID=cds-WP_000203013.1;Parent=gene-C9F04_RS17590;Dbxref=Genbank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9F04_RS17590;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11
NZ_PYKF01000591.1	RefSeq	gene	1492	2436	.	+	.	ID=gene-C9F04_RS17595;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9F04_RS17595;old_locus_tag=C9F04_18155
NZ_PYKF01000591.1	Protein Homology	CDS	1492	2436	.	+	0	ID=cds-WP_000939597.1;Parent=gene-C9F04_RS17595;Dbxref=Genbank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9F04_RS17595;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11
NZ_PYKF01000591.1	RefSeq	gene	2452	3062	.	+	.	ID=gene-C9F04_RS17600;Name=C9F04_RS17600;end_range=3062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17600;old_locus_tag=C9F04_18160;partial=true
NZ_PYKF01000591.1	Protein Homology	CDS	2452	3062	.	+	0	ID=cds-WP_146712956.1;Parent=gene-C9F04_RS17600;Dbxref=Genbank:WP_146712956.1;Name=WP_146712956.1;end_range=3062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F04_RS17600;partial=true;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_146712956.1;transl_table=11
##sequence-region NZ_PYKF01000505.1 1 3049
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000505.1	RefSeq	region	1	3049	.	+	.	ID=NZ_PYKF01000505.1:1..3049;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000505.1	RefSeq	gene	1	603	.	-	.	ID=gene-C9F04_RS15115;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9F04_RS15115;old_locus_tag=C9F04_15600;partial=true;start_range=.,1
NZ_PYKF01000505.1	Protein Homology	CDS	1	603	.	-	0	ID=cds-WP_146712820.1;Parent=gene-C9F04_RS15115;Dbxref=Genbank:WP_146712820.1;Name=WP_146712820.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9F04_RS15115;partial=true;product=asparaginase;protein_id=WP_146712820.1;start_range=.,1;transl_table=11
NZ_PYKF01000505.1	RefSeq	gene	699	2555	.	-	.	ID=gene-C9F04_RS15120;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9F04_RS15120;old_locus_tag=C9F04_15605
NZ_PYKF01000505.1	Protein Homology	CDS	699	2555	.	-	0	ID=cds-WP_050068356.1;Parent=gene-C9F04_RS15120;Dbxref=Genbank:WP_050068356.1;Name=WP_050068356.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9F04_RS15120;product=signal peptide peptidase SppA;protein_id=WP_050068356.1;transl_table=11
NZ_PYKF01000505.1	RefSeq	gene	2729	3049	.	+	.	ID=gene-C9F04_RS15125;Name=C9F04_RS15125;end_range=3049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15125;old_locus_tag=C9F04_15610;partial=true
NZ_PYKF01000505.1	Protein Homology	CDS	2729	3049	.	+	0	ID=cds-WP_186799037.1;Parent=gene-C9F04_RS15125;Dbxref=Genbank:WP_186799037.1;Name=WP_186799037.1;end_range=3049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9F04_RS15125;partial=true;product=nitroreductase family protein;protein_id=WP_186799037.1;transl_table=11
##sequence-region NZ_PYKF01000583.1 1 3021
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000583.1	RefSeq	region	1	3021	.	+	.	ID=NZ_PYKF01000583.1:1..3021;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000583.1	RefSeq	gene	246	2204	.	+	.	ID=gene-C9F04_RS17355;Name=C9F04_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17355;old_locus_tag=C9F04_17915
NZ_PYKF01000583.1	Protein Homology	CDS	246	2204	.	+	0	ID=cds-WP_146712940.1;Parent=gene-C9F04_RS17355;Dbxref=Genbank:WP_146712940.1;Name=WP_146712940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9F04_RS17355;product=site-specific DNA-methyltransferase;protein_id=WP_146712940.1;transl_table=11
NZ_PYKF01000583.1	RefSeq	gene	2214	3021	.	+	.	ID=gene-C9F04_RS17360;Name=C9F04_RS17360;end_range=3021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17360;old_locus_tag=C9F04_17920;partial=true
NZ_PYKF01000583.1	Protein Homology	CDS	2214	3021	.	+	0	ID=cds-WP_186799052.1;Parent=gene-C9F04_RS17360;Dbxref=Genbank:WP_186799052.1;Name=WP_186799052.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;end_range=3021,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F04_RS17360;partial=true;product=DEAD/DEAH box helicase family protein;protein_id=WP_186799052.1;transl_table=11
##sequence-region NZ_PYKF01000475.1 1 2993
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000475.1	RefSeq	region	1	2993	.	+	.	ID=NZ_PYKF01000475.1:1..2993;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000475.1	RefSeq	pseudogene	1	139	.	-	.	ID=gene-C9F04_RS27055;Name=C9F04_RS27055;end_range=139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27055;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000475.1	Protein Homology	CDS	1	139	.	-	0	ID=cds-C9F04_RS27055;Parent=gene-C9F04_RS27055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=C9F04_RS27055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000475.1	RefSeq	gene	737	1933	.	-	.	ID=gene-C9F04_RS14235;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9F04_RS14235;old_locus_tag=C9F04_14695
NZ_PYKF01000475.1	Protein Homology	CDS	737	1933	.	-	0	ID=cds-WP_031606719.1;Parent=gene-C9F04_RS14235;Dbxref=Genbank:WP_031606719.1;Name=WP_031606719.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9F04_RS14235;product=protoheme IX biogenesis protein HemY;protein_id=WP_031606719.1;transl_table=11
NZ_PYKF01000475.1	RefSeq	gene	1936	2993	.	-	.	ID=gene-C9F04_RS14240;Name=hemX;end_range=2993,.;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9F04_RS14240;old_locus_tag=C9F04_14700;partial=true
NZ_PYKF01000475.1	Protein Homology	CDS	1936	2993	.	-	2	ID=cds-WP_146712791.1;Parent=gene-C9F04_RS14240;Dbxref=Genbank:WP_146712791.1;Name=WP_146712791.1;end_range=2993,.;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9F04_RS14240;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_146712791.1;transl_table=11
##sequence-region NZ_PYKF01000568.1 1 2990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000568.1	RefSeq	region	1	2990	.	+	.	ID=NZ_PYKF01000568.1:1..2990;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000568.1	RefSeq	pseudogene	1	404	.	-	.	ID=gene-C9F04_RS16970;Name=C9F04_RS16970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16970;old_locus_tag=C9F04_17515;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000568.1	Protein Homology	CDS	1	404	.	-	0	ID=cds-C9F04_RS16970;Parent=gene-C9F04_RS16970;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9F04_RS16970;partial=true;product=[citrate (pro-3S)-lyase] ligase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000568.1	RefSeq	gene	649	1989	.	+	.	ID=gene-C9F04_RS16975;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9F04_RS16975;old_locus_tag=C9F04_17520
NZ_PYKF01000568.1	Protein Homology	CDS	649	1989	.	+	0	ID=cds-WP_000183602.1;Parent=gene-C9F04_RS16975;Dbxref=Genbank:WP_000183602.1;Name=WP_000183602.1;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9F04_RS16975;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11
NZ_PYKF01000568.1	RefSeq	gene	2148	2387	.	+	.	ID=gene-C9F04_RS16980;Name=C9F04_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16980;old_locus_tag=C9F04_17525
NZ_PYKF01000568.1	Protein Homology	CDS	2148	2387	.	+	0	ID=cds-WP_146712920.1;Parent=gene-C9F04_RS16980;Dbxref=Genbank:WP_146712920.1;Name=WP_146712920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9F04_RS16980;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_146712920.1;transl_table=11
NZ_PYKF01000568.1	RefSeq	pseudogene	2404	2990	.	+	.	ID=gene-C9F04_RS16985;Name=C9F04_RS16985;end_range=2990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16985;old_locus_tag=C9F04_17530;partial=true;pseudo=true
NZ_PYKF01000568.1	Protein Homology	CDS	2404	2990	.	+	0	ID=cds-C9F04_RS16985;Parent=gene-C9F04_RS16985;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS16985;partial=true;product=oxaloacetate decarboxylase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000549.1 1 17547
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000549.1	RefSeq	region	1	17547	.	+	.	ID=NZ_PYKF01000549.1:1..17547;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000549.1	RefSeq	pseudogene	1	324	.	+	.	ID=gene-C9F04_RS16415;Name=C9F04_RS16415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16415;old_locus_tag=C9F04_16915;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000549.1	Protein Homology	CDS	1	324	.	+	0	ID=cds-C9F04_RS16415;Parent=gene-C9F04_RS16415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9F04_RS16415;partial=true;product=phosphate acyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	404	1357	.	+	.	ID=gene-C9F04_RS16420;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9F04_RS16420;old_locus_tag=C9F04_16920
NZ_PYKF01000549.1	Protein Homology	CDS	404	1357	.	+	0	ID=cds-WP_000288148.1;Parent=gene-C9F04_RS16420;Dbxref=Genbank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F04_RS16420;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	1373	2302	.	+	.	ID=gene-C9F04_RS16425;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9F04_RS16425;old_locus_tag=C9F04_16925
NZ_PYKF01000549.1	Protein Homology	CDS	1373	2302	.	+	0	ID=cds-WP_135369039.1;Parent=gene-C9F04_RS16425;Dbxref=Genbank:WP_135369039.1;Name=WP_135369039.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9F04_RS16425;product=ACP S-malonyltransferase;protein_id=WP_135369039.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	2315	3049	.	+	.	ID=gene-C9F04_RS16430;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9F04_RS16430;old_locus_tag=C9F04_16930
NZ_PYKF01000549.1	Protein Homology	CDS	2315	3049	.	+	0	ID=cds-WP_000007236.1;Parent=gene-C9F04_RS16430;Dbxref=Genbank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9F04_RS16430;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	3205	3441	.	+	.	ID=gene-C9F04_RS16435;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9F04_RS16435;old_locus_tag=C9F04_16935
NZ_PYKF01000549.1	Protein Homology	CDS	3205	3441	.	+	0	ID=cds-WP_000103754.1;Parent=gene-C9F04_RS16435;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9F04_RS16435;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	3527	4768	.	+	.	ID=gene-C9F04_RS16440;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9F04_RS16440;old_locus_tag=C9F04_16940
NZ_PYKF01000549.1	Protein Homology	CDS	3527	4768	.	+	0	ID=cds-WP_000044664.1;Parent=gene-C9F04_RS16440;Dbxref=Genbank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9F04_RS16440;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	4892	5701	.	+	.	ID=gene-C9F04_RS16445;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9F04_RS16445;old_locus_tag=C9F04_16945
NZ_PYKF01000549.1	Protein Homology	CDS	4892	5701	.	+	0	ID=cds-WP_000478660.1;Parent=gene-C9F04_RS16445;Dbxref=Genbank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9F04_RS16445;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	5704	6726	.	+	.	ID=gene-C9F04_RS16450;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9F04_RS16450;old_locus_tag=C9F04_16950
NZ_PYKF01000549.1	Protein Homology	CDS	5704	6726	.	+	0	ID=cds-WP_146712889.1;Parent=gene-C9F04_RS16450;Dbxref=Genbank:WP_146712889.1;Name=WP_146712889.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9F04_RS16450;product=cell division protein YceG;protein_id=WP_146712889.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	6716	7357	.	+	.	ID=gene-C9F04_RS16455;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9F04_RS16455;old_locus_tag=C9F04_16955
NZ_PYKF01000549.1	Protein Homology	CDS	6716	7357	.	+	0	ID=cds-WP_000535396.1;Parent=gene-C9F04_RS16455;Dbxref=Genbank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9F04_RS16455;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	7354	8358	.	+	.	ID=gene-C9F04_RS16460;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9F04_RS16460;old_locus_tag=C9F04_16960
NZ_PYKF01000549.1	Protein Homology	CDS	7354	8358	.	+	0	ID=cds-WP_000872450.1;Parent=gene-C9F04_RS16460;Dbxref=Genbank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9F04_RS16460;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	8369	9166	.	+	.	ID=gene-C9F04_RS16465;Name=C9F04_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16465;old_locus_tag=C9F04_16965
NZ_PYKF01000549.1	Protein Homology	CDS	8369	9166	.	+	0	ID=cds-WP_000480268.1;Parent=gene-C9F04_RS16465;Dbxref=Genbank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9F04_RS16465;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	9461	10894	.	+	.	ID=gene-C9F04_RS16470;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9F04_RS16470;old_locus_tag=C9F04_16970
NZ_PYKF01000549.1	Protein Homology	CDS	9461	10894	.	+	0	ID=cds-WP_000475708.1;Parent=gene-C9F04_RS16470;Dbxref=Genbank:WP_000475708.1;Name=WP_000475708.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9F04_RS16470;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475708.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	10980	13154	.	-	.	ID=gene-C9F04_RS16475;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=C9F04_RS16475;old_locus_tag=C9F04_16975
NZ_PYKF01000549.1	Protein Homology	CDS	10980	13154	.	-	0	ID=cds-WP_146712890.1;Parent=gene-C9F04_RS16475;Dbxref=Genbank:WP_146712890.1;Name=WP_146712890.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F04_RS16475;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_146712890.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	13496	13855	.	+	.	ID=gene-C9F04_RS16480;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9F04_RS16480;old_locus_tag=C9F04_16980
NZ_PYKF01000549.1	Protein Homology	CDS	13496	13855	.	+	0	ID=cds-WP_001532068.1;Parent=gene-C9F04_RS16480;Dbxref=Genbank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9F04_RS16480;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	13858	14232	.	+	.	ID=gene-C9F04_RS16485;Name=C9F04_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16485;old_locus_tag=C9F04_16985
NZ_PYKF01000549.1	Protein Homology	CDS	13858	14232	.	+	0	ID=cds-WP_000589563.1;Parent=gene-C9F04_RS16485;Dbxref=Genbank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9F04_RS16485;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	14246	14884	.	+	.	ID=gene-C9F04_RS16490;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9F04_RS16490;old_locus_tag=C9F04_16990
NZ_PYKF01000549.1	Protein Homology	CDS	14246	14884	.	+	0	ID=cds-WP_000164359.1;Parent=gene-C9F04_RS16490;Dbxref=Genbank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9F04_RS16490;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	14865	15689	.	+	.	ID=gene-C9F04_RS16495;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9F04_RS16495;old_locus_tag=C9F04_16995
NZ_PYKF01000549.1	Protein Homology	CDS	14865	15689	.	+	0	ID=cds-WP_135369038.1;Parent=gene-C9F04_RS16495;Dbxref=Genbank:WP_135369038.1;Name=WP_135369038.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9F04_RS16495;product=thiamine kinase;protein_id=WP_135369038.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	15700	16725	.	+	.	ID=gene-C9F04_RS16500;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9F04_RS16500;old_locus_tag=C9F04_17000
NZ_PYKF01000549.1	Protein Homology	CDS	15700	16725	.	+	0	ID=cds-WP_000529339.1;Parent=gene-C9F04_RS16500;Dbxref=Genbank:WP_000529339.1;Name=WP_000529339.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9F04_RS16500;product=beta-N-acetylhexosaminidase;protein_id=WP_000529339.1;transl_table=11
NZ_PYKF01000549.1	RefSeq	gene	16750	17292	.	+	.	ID=gene-C9F04_RS16505;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9F04_RS16505;old_locus_tag=C9F04_17005
NZ_PYKF01000549.1	Protein Homology	CDS	16750	17292	.	+	0	ID=cds-WP_000587943.1;Parent=gene-C9F04_RS16505;Dbxref=Genbank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9F04_RS16505;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11
##sequence-region NZ_PYKF01000181.1 1 2973
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000181.1	RefSeq	region	1	2973	.	+	.	ID=NZ_PYKF01000181.1:1..2973;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000181.1	RefSeq	gene	28	1332	.	+	.	ID=gene-C9F04_RS04130;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9F04_RS04130;old_locus_tag=C9F04_04270
NZ_PYKF01000181.1	Protein Homology	CDS	28	1332	.	+	0	ID=cds-WP_146712321.1;Parent=gene-C9F04_RS04130;Dbxref=Genbank:WP_146712321.1;Name=WP_146712321.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9F04_RS04130;product=type VI secretion system protein TssL%2C long form;protein_id=WP_146712321.1;transl_table=11
NZ_PYKF01000181.1	RefSeq	gene	1337	2110	.	+	.	ID=gene-C9F04_RS04135;Name=C9F04_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04135;old_locus_tag=C9F04_04275
NZ_PYKF01000181.1	Protein Homology	CDS	1337	2110	.	+	0	ID=cds-WP_107280791.1;Parent=gene-C9F04_RS04135;Dbxref=Genbank:WP_107280791.1;Name=WP_107280791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9F04_RS04135;product=Rap1a/Tai family immunity protein;protein_id=WP_107280791.1;transl_table=11
NZ_PYKF01000181.1	RefSeq	gene	2313	2744	.	+	.	ID=gene-C9F04_RS04140;Name=C9F04_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04140;old_locus_tag=C9F04_04285
NZ_PYKF01000181.1	Protein Homology	CDS	2313	2744	.	+	0	ID=cds-WP_000227044.1;Parent=gene-C9F04_RS04140;Dbxref=Genbank:WP_000227044.1;Name=WP_000227044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9F04_RS04140;product=Shiga toxin A subunit;protein_id=WP_000227044.1;transl_table=11
NZ_PYKF01000181.1	RefSeq	pseudogene	2778	2973	.	+	.	ID=gene-C9F04_RS04145;Name=C9F04_RS04145;end_range=2973,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04145;old_locus_tag=C9F04_04290;partial=true;pseudo=true
NZ_PYKF01000181.1	Protein Homology	CDS	2778	2973	.	+	0	ID=cds-C9F04_RS04145;Parent=gene-C9F04_RS04145;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640042.1;locus_tag=C9F04_RS04145;partial=true;product=type VI secretion protein IcmF;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000486.1 1 2963
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000486.1	RefSeq	region	1	2963	.	+	.	ID=NZ_PYKF01000486.1:1..2963;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000486.1	RefSeq	gene	1	811	.	+	.	ID=gene-C9F04_RS14610;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9F04_RS14610;old_locus_tag=C9F04_15095;partial=true;start_range=.,1
NZ_PYKF01000486.1	Protein Homology	CDS	1	811	.	+	1	ID=cds-WP_146712801.1;Parent=gene-C9F04_RS14610;Dbxref=Genbank:WP_146712801.1;Name=WP_146712801.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906836.1;locus_tag=C9F04_RS14610;partial=true;product=isochorismate synthase MenF;protein_id=WP_146712801.1;start_range=.,1;transl_table=11
NZ_PYKF01000486.1	RefSeq	gene	897	2567	.	+	.	ID=gene-C9F04_RS14615;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9F04_RS14615;old_locus_tag=C9F04_15100
NZ_PYKF01000486.1	Protein Homology	CDS	897	2567	.	+	0	ID=cds-WP_135369261.1;Parent=gene-C9F04_RS14615;Dbxref=Genbank:WP_135369261.1;Name=WP_135369261.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9F04_RS14615;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_135369261.1;transl_table=11
NZ_PYKF01000486.1	RefSeq	gene	2564	2963	.	+	.	ID=gene-C9F04_RS14620;Name=C9F04_RS14620;end_range=2963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14620;old_locus_tag=C9F04_15105;partial=true
NZ_PYKF01000486.1	Protein Homology	CDS	2564	2963	.	+	0	ID=cds-WP_146712802.1;Parent=gene-C9F04_RS14620;Dbxref=Genbank:WP_146712802.1;Name=WP_146712802.1;end_range=2963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077286.1;locus_tag=C9F04_RS14620;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_146712802.1;transl_table=11
##sequence-region NZ_PYKF01000275.1 1 2955
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000275.1	RefSeq	region	1	2955	.	+	.	ID=NZ_PYKF01000275.1:1..2955;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000275.1	RefSeq	gene	1	2270	.	-	.	ID=gene-C9F04_RS26965;Name=C9F04_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26965;partial=true;start_range=.,1
NZ_PYKF01000275.1	Protein Homology	CDS	1	2270	.	-	0	ID=cds-WP_261770758.1;Parent=gene-C9F04_RS26965;Dbxref=Genbank:WP_261770758.1;Name=WP_261770758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124839.1;locus_tag=C9F04_RS26965;partial=true;product=virulence factor SrfB;protein_id=WP_261770758.1;start_range=.,1;transl_table=11
NZ_PYKF01000275.1	RefSeq	gene	2275	2955	.	-	.	ID=gene-C9F04_RS07585;Name=C9F04_RS07585;end_range=2955,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07585;old_locus_tag=C9F04_07830;partial=true
NZ_PYKF01000275.1	Protein Homology	CDS	2275	2955	.	-	0	ID=cds-WP_261770759.1;Parent=gene-C9F04_RS07585;Dbxref=Genbank:WP_261770759.1;Name=WP_261770759.1;end_range=2955,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001129953.1;locus_tag=C9F04_RS07585;partial=true;product=SrfA family protein;protein_id=WP_261770759.1;transl_table=11
##sequence-region NZ_PYKF01000588.1 1 2946
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000588.1	RefSeq	region	1	2946	.	+	.	ID=NZ_PYKF01000588.1:1..2946;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000588.1	RefSeq	gene	1	419	.	+	.	ID=gene-C9F04_RS17525;Name=C9F04_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17525;old_locus_tag=C9F04_18085;partial=true;start_range=.,1
NZ_PYKF01000588.1	Protein Homology	CDS	1	419	.	+	2	ID=cds-WP_146712950.1;Parent=gene-C9F04_RS17525;Dbxref=Genbank:WP_146712950.1;Name=WP_146712950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9F04_RS17525;partial=true;product=ATP-binding protein;protein_id=WP_146712950.1;start_range=.,1;transl_table=11
NZ_PYKF01000588.1	RefSeq	gene	416	1135	.	+	.	ID=gene-C9F04_RS17530;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9F04_RS17530;old_locus_tag=C9F04_18090
NZ_PYKF01000588.1	Protein Homology	CDS	416	1135	.	+	0	ID=cds-WP_000611307.1;Parent=gene-C9F04_RS17530;Dbxref=Genbank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9F04_RS17530;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11
NZ_PYKF01000588.1	RefSeq	gene	1452	1718	.	+	.	ID=gene-C9F04_RS17535;Name=C9F04_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17535;old_locus_tag=C9F04_18095
NZ_PYKF01000588.1	Protein Homology	CDS	1452	1718	.	+	0	ID=cds-WP_024137308.1;Parent=gene-C9F04_RS17535;Dbxref=Genbank:WP_024137308.1;Name=WP_024137308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9F04_RS17535;product=hypothetical protein;protein_id=WP_024137308.1;transl_table=11
NZ_PYKF01000588.1	RefSeq	gene	1865	2946	.	+	.	ID=gene-C9F04_RS17540;Name=C9F04_RS17540;end_range=2946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17540;old_locus_tag=C9F04_18100;partial=true
NZ_PYKF01000588.1	Protein Homology	CDS	1865	2946	.	+	0	ID=cds-WP_146712951.1;Parent=gene-C9F04_RS17540;Dbxref=Genbank:WP_146712951.1;Name=WP_146712951.1;end_range=2946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093113.1;locus_tag=C9F04_RS17540;partial=true;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_146712951.1;transl_table=11
##sequence-region NZ_PYKF01000693.1 1 2946
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000693.1	RefSeq	region	1	2946	.	+	.	ID=NZ_PYKF01000693.1:1..2946;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000693.1	RefSeq	gene	1	98	.	-	.	ID=gene-C9F04_RS27200;Name=C9F04_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27200;partial=true;start_range=.,1
NZ_PYKF01000693.1	Protein Homology	CDS	1	98	.	-	0	ID=cds-WP_261771437.1;Parent=gene-C9F04_RS27200;Dbxref=Genbank:WP_261771437.1;Name=WP_261771437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9F04_RS27200;partial=true;product=hypothetical protein;protein_id=WP_261771437.1;start_range=.,1;transl_table=11
NZ_PYKF01000693.1	RefSeq	gene	166	954	.	-	.	ID=gene-C9F04_RS21315;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9F04_RS21315;old_locus_tag=C9F04_22005
NZ_PYKF01000693.1	Protein Homology	CDS	166	954	.	-	0	ID=cds-WP_146713137.1;Parent=gene-C9F04_RS21315;Dbxref=Genbank:WP_146713137.1;Name=WP_146713137.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9F04_RS21315;product=molybdenum-dependent transcriptional regulator;protein_id=WP_146713137.1;transl_table=11
NZ_PYKF01000693.1	RefSeq	gene	1083	1232	.	+	.	ID=gene-C9F04_RS21320;Name=C9F04_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21320;old_locus_tag=C9F04_22010
NZ_PYKF01000693.1	Protein Homology	CDS	1083	1232	.	+	0	ID=cds-WP_000891513.1;Parent=gene-C9F04_RS21320;Dbxref=Genbank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9F04_RS21320;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11
NZ_PYKF01000693.1	RefSeq	gene	1399	2172	.	+	.	ID=gene-C9F04_RS21325;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9F04_RS21325;old_locus_tag=C9F04_22015
NZ_PYKF01000693.1	Protein Homology	CDS	1399	2172	.	+	0	ID=cds-WP_146713138.1;Parent=gene-C9F04_RS21325;Dbxref=Genbank:WP_146713138.1;Name=WP_146713138.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9F04_RS21325;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_146713138.1;transl_table=11
NZ_PYKF01000693.1	RefSeq	gene	2172	2861	.	+	.	ID=gene-C9F04_RS21330;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9F04_RS21330;old_locus_tag=C9F04_22020
NZ_PYKF01000693.1	Protein Homology	CDS	2172	2861	.	+	0	ID=cds-WP_000604026.1;Parent=gene-C9F04_RS21330;Dbxref=Genbank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016021;gbkey=CDS;gene=modB;go_component=integral component of membrane|0016021||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9F04_RS21330;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11
NZ_PYKF01000693.1	RefSeq	gene	2864	2946	.	+	.	ID=gene-C9F04_RS27205;Name=C9F04_RS27205;end_range=2946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27205;partial=true
NZ_PYKF01000693.1	Protein Homology	CDS	2864	2946	.	+	0	ID=cds-WP_261771438.1;Parent=gene-C9F04_RS27205;Dbxref=Genbank:WP_261771438.1;Name=WP_261771438.1;end_range=2946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9F04_RS27205;partial=true;product=hypothetical protein;protein_id=WP_261771438.1;transl_table=11
##sequence-region NZ_PYKF01000625.1 1 2942
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000625.1	RefSeq	region	1	2942	.	+	.	ID=NZ_PYKF01000625.1:1..2942;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000625.1	RefSeq	gene	1	601	.	-	.	ID=gene-C9F04_RS18970;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9F04_RS18970;old_locus_tag=C9F04_19590;partial=true;start_range=.,1
NZ_PYKF01000625.1	Protein Homology	CDS	1	601	.	-	0	ID=cds-WP_146713015.1;Parent=gene-C9F04_RS18970;Dbxref=Genbank:WP_146713015.1;Name=WP_146713015.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F04_RS18970;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_146713015.1;start_range=.,1;transl_table=11
NZ_PYKF01000625.1	RefSeq	gene	688	2847	.	-	.	ID=gene-C9F04_RS18975;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9F04_RS18975;old_locus_tag=C9F04_19595
NZ_PYKF01000625.1	Protein Homology	CDS	688	2847	.	-	0	ID=cds-WP_135369705.1;Parent=gene-C9F04_RS18975;Dbxref=Genbank:WP_135369705.1;Name=WP_135369705.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9F04_RS18975;product=tyrosine-protein kinase Wzc;protein_id=WP_135369705.1;transl_table=11
NZ_PYKF01000625.1	RefSeq	pseudogene	2844	2942	.	-	.	ID=gene-C9F04_RS18980;Name=C9F04_RS18980;end_range=2942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18980;old_locus_tag=C9F04_19600;partial=true;pseudo=true
NZ_PYKF01000625.1	Protein Homology	CDS	2844	2942	.	-	0	ID=cds-C9F04_RS18980;Parent=gene-C9F04_RS18980;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9F04_RS18980;partial=true;product=protein tyrosine phosphatase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000763.1 1 2940
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000763.1	RefSeq	region	1	2940	.	+	.	ID=NZ_PYKF01000763.1:1..2940;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000763.1	RefSeq	pseudogene	36	587	.	+	.	ID=gene-C9F04_RS23725;Name=C9F04_RS23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23725;old_locus_tag=C9F04_24520;partial=true;pseudo=true;start_range=.,36
NZ_PYKF01000763.1	Protein Homology	CDS	36	587	.	+	0	ID=cds-C9F04_RS23725;Parent=gene-C9F04_RS23725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9F04_RS23725;partial=true;product=chorismate-binding protein;pseudo=true;start_range=.,36;transl_table=11
NZ_PYKF01000763.1	RefSeq	gene	597	2207	.	+	.	ID=gene-C9F04_RS23730;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F04_RS23730;old_locus_tag=C9F04_24525
NZ_PYKF01000763.1	Protein Homology	CDS	597	2207	.	+	0	ID=cds-WP_135369419.1;Parent=gene-C9F04_RS23730;Dbxref=Genbank:WP_135369419.1;Name=WP_135369419.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9F04_RS23730;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_135369419.1;transl_table=11
NZ_PYKF01000763.1	RefSeq	pseudogene	2221	2850	.	+	.	ID=gene-C9F04_RS23735;Name=C9F04_RS23735;end_range=2850,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23735;old_locus_tag=C9F04_24530;partial=true;pseudo=true
NZ_PYKF01000763.1	Protein Homology	CDS	2221	2850	.	+	0	ID=cds-C9F04_RS23735;Parent=gene-C9F04_RS23735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9F04_RS23735;partial=true;product=isochorismatase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000617.1 1 2936
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000617.1	RefSeq	region	1	2936	.	+	.	ID=NZ_PYKF01000617.1:1..2936;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000617.1	RefSeq	gene	1	920	.	+	.	ID=gene-C9F04_RS18715;Name=C9F04_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18715;old_locus_tag=C9F04_19330;partial=true;start_range=.,1
NZ_PYKF01000617.1	Protein Homology	CDS	1	920	.	+	2	ID=cds-WP_146713005.1;Parent=gene-C9F04_RS18715;Dbxref=Genbank:WP_146713005.1;Name=WP_146713005.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9F04_RS18715;partial=true;product=6-phospho-beta-glucosidase;protein_id=WP_146713005.1;start_range=.,1;transl_table=11
NZ_PYKF01000617.1	RefSeq	gene	933	1691	.	+	.	ID=gene-C9F04_RS18720;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9F04_RS18720;old_locus_tag=C9F04_19335
NZ_PYKF01000617.1	Protein Homology	CDS	933	1691	.	+	0	ID=cds-WP_135369226.1;Parent=gene-C9F04_RS18720;Dbxref=Genbank:WP_135369226.1;Name=WP_135369226.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9F04_RS18720;product=chitin disaccharide deacetylase;protein_id=WP_135369226.1;transl_table=11
NZ_PYKF01000617.1	RefSeq	gene	1735	2936	.	-	.	ID=gene-C9F04_RS18725;Name=C9F04_RS18725;end_range=2936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18725;old_locus_tag=C9F04_19340;partial=true
NZ_PYKF01000617.1	Protein Homology	CDS	1735	2936	.	-	2	ID=cds-WP_261771367.1;Parent=gene-C9F04_RS18725;Dbxref=Genbank:WP_261771367.1;Name=WP_261771367.1;Ontology_term=GO:0004096,GO:0020037;end_range=2936,.;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F04_RS18725;partial=true;product=catalase;protein_id=WP_261771367.1;transl_table=11
##sequence-region NZ_PYKF01000514.1 1 2924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000514.1	RefSeq	region	1	2924	.	+	.	ID=NZ_PYKF01000514.1:1..2924;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000514.1	RefSeq	gene	120	1178	.	+	.	ID=gene-C9F04_RS15445;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9F04_RS15445;old_locus_tag=C9F04_15935
NZ_PYKF01000514.1	Protein Homology	CDS	120	1178	.	+	0	ID=cds-WP_000231891.1;Parent=gene-C9F04_RS15445;Dbxref=Genbank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016021;gbkey=CDS;gene=rsxD;go_component=integral component of membrane|0016021||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9F04_RS15445;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11
NZ_PYKF01000514.1	RefSeq	gene	1182	1802	.	+	.	ID=gene-C9F04_RS15450;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9F04_RS15450;old_locus_tag=C9F04_15940
NZ_PYKF01000514.1	Protein Homology	CDS	1182	1802	.	+	0	ID=cds-WP_000920822.1;Parent=gene-C9F04_RS15450;Dbxref=Genbank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9F04_RS15450;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11
NZ_PYKF01000514.1	RefSeq	gene	1805	2497	.	+	.	ID=gene-C9F04_RS15455;Name=C9F04_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15455;old_locus_tag=C9F04_15945
NZ_PYKF01000514.1	Protein Homology	CDS	1805	2497	.	+	0	ID=cds-WP_001289628.1;Parent=gene-C9F04_RS15455;Dbxref=Genbank:WP_001289628.1;Name=WP_001289628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9F04_RS15455;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11
NZ_PYKF01000514.1	RefSeq	gene	2497	2924	.	+	.	ID=gene-C9F04_RS15460;Name=C9F04_RS15460;end_range=2924,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15460;old_locus_tag=C9F04_15950;partial=true
NZ_PYKF01000514.1	Protein Homology	CDS	2497	2924	.	+	0	ID=cds-WP_146712844.1;Parent=gene-C9F04_RS15460;Dbxref=Genbank:WP_146712844.1;Name=WP_146712844.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;end_range=2924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F04_RS15460;partial=true;product=endonuclease III;protein_id=WP_146712844.1;transl_table=11
##sequence-region NZ_PYKF01000146.1 1 2918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000146.1	RefSeq	region	1	2918	.	+	.	ID=NZ_PYKF01000146.1:1..2918;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000146.1	RefSeq	gene	1	520	.	-	.	ID=gene-C9F04_RS03085;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9F04_RS03085;old_locus_tag=C9F04_03190;partial=true;start_range=.,1
NZ_PYKF01000146.1	Protein Homology	CDS	1	520	.	-	0	ID=cds-WP_146712275.1;Parent=gene-C9F04_RS03085;Dbxref=Genbank:WP_146712275.1;Name=WP_146712275.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9F04_RS03085;partial=true;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_146712275.1;start_range=.,1;transl_table=11
NZ_PYKF01000146.1	RefSeq	gene	530	1426	.	-	.	ID=gene-C9F04_RS03090;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9F04_RS03090;old_locus_tag=C9F04_03195
NZ_PYKF01000146.1	Protein Homology	CDS	530	1426	.	-	0	ID=cds-WP_146712276.1;Parent=gene-C9F04_RS03090;Dbxref=Genbank:WP_146712276.1;Name=WP_146712276.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9F04_RS03090;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_146712276.1;transl_table=11
NZ_PYKF01000146.1	RefSeq	pseudogene	1445	2806	.	-	.	ID=gene-C9F04_RS03095;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=pseudogene;locus_tag=C9F04_RS03095;old_locus_tag=C9F04_03200;pseudo=true
NZ_PYKF01000146.1	Protein Homology	CDS	1445	2806	.	-	0	ID=cds-C9F04_RS03095;Parent=gene-C9F04_RS03095;Note=internal stop;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9F04_RS03095;product=ethanolamine ammonia-lyase subunit alpha;pseudo=true;transl_table=11
NZ_PYKF01000146.1	RefSeq	gene	2818	2918	.	-	.	ID=gene-C9F04_RS03100;Name=C9F04_RS03100;end_range=2918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03100;partial=true
NZ_PYKF01000146.1	Protein Homology	CDS	2818	2918	.	-	2	ID=cds-WP_146712277.1;Parent=gene-C9F04_RS03100;Dbxref=Genbank:WP_146712277.1;Name=WP_146712277.1;end_range=2918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708299.1;locus_tag=C9F04_RS03100;partial=true;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_146712277.1;transl_table=11
##sequence-region NZ_PYKF01000832.1 1 17497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000832.1	RefSeq	region	1	17497	.	+	.	ID=NZ_PYKF01000832.1:1..17497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000832.1	RefSeq	gene	1	1758	.	-	.	ID=gene-C9F04_RS26035;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9F04_RS26035;old_locus_tag=C9F04_26940;partial=true;start_range=.,1
NZ_PYKF01000832.1	Protein Homology	CDS	1	1758	.	-	0	ID=cds-WP_146713378.1;Parent=gene-C9F04_RS26035;Dbxref=Genbank:WP_146713378.1;Name=WP_146713378.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F04_RS26035;partial=true;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_146713378.1;start_range=.,1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	1947	3317	.	-	.	ID=gene-C9F04_RS26040;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9F04_RS26040;old_locus_tag=C9F04_26945
NZ_PYKF01000832.1	Protein Homology	CDS	1947	3317	.	-	0	ID=cds-WP_000934851.1;Parent=gene-C9F04_RS26040;Dbxref=Genbank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9F04_RS26040;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	3637	4335	.	-	.	ID=gene-C9F04_RS26045;Name=C9F04_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26045;old_locus_tag=C9F04_26955
NZ_PYKF01000832.1	Protein Homology	CDS	3637	4335	.	-	0	ID=cds-WP_000009908.1;Parent=gene-C9F04_RS26045;Dbxref=Genbank:WP_000009908.1;Name=WP_000009908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9F04_RS26045;product=Bax inhibitor-1 family protein;protein_id=WP_000009908.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	4565	4984	.	-	.	ID=gene-C9F04_RS26050;Name=C9F04_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26050;old_locus_tag=C9F04_26960
NZ_PYKF01000832.1	Protein Homology	CDS	4565	4984	.	-	0	ID=cds-WP_001251971.1;Parent=gene-C9F04_RS26050;Dbxref=Genbank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9F04_RS26050;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	5005	6387	.	-	.	ID=gene-C9F04_RS26055;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9F04_RS26055;old_locus_tag=C9F04_26965
NZ_PYKF01000832.1	Protein Homology	CDS	5005	6387	.	-	0	ID=cds-WP_146713379.1;Parent=gene-C9F04_RS26055;Dbxref=Genbank:WP_146713379.1;Name=WP_146713379.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9F04_RS26055;product=F0F1 ATP synthase subunit beta;protein_id=WP_146713379.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	6414	7277	.	-	.	ID=gene-C9F04_RS26060;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9F04_RS26060;old_locus_tag=C9F04_26970
NZ_PYKF01000832.1	Protein Homology	CDS	6414	7277	.	-	0	ID=cds-WP_000896506.1;Parent=gene-C9F04_RS26060;Dbxref=Genbank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9F04_RS26060;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	7328	8869	.	-	.	ID=gene-C9F04_RS26065;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9F04_RS26065;old_locus_tag=C9F04_26975
NZ_PYKF01000832.1	Protein Homology	CDS	7328	8869	.	-	0	ID=cds-WP_001176751.1;Parent=gene-C9F04_RS26065;Dbxref=Genbank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9F04_RS26065;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	8882	9415	.	-	.	ID=gene-C9F04_RS26070;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9F04_RS26070;old_locus_tag=C9F04_26980
NZ_PYKF01000832.1	Protein Homology	CDS	8882	9415	.	-	0	ID=cds-WP_001288957.1;Parent=gene-C9F04_RS26070;Dbxref=Genbank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9F04_RS26070;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	9430	9900	.	-	.	ID=gene-C9F04_RS26075;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9F04_RS26075;old_locus_tag=C9F04_26985
NZ_PYKF01000832.1	Protein Homology	CDS	9430	9900	.	-	0	ID=cds-WP_001052212.1;Parent=gene-C9F04_RS26075;Dbxref=Genbank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9F04_RS26075;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	9960	10199	.	-	.	ID=gene-C9F04_RS26080;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9F04_RS26080;old_locus_tag=C9F04_26990
NZ_PYKF01000832.1	Protein Homology	CDS	9960	10199	.	-	0	ID=cds-WP_000429386.1;Parent=gene-C9F04_RS26080;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9F04_RS26080;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	10246	11061	.	-	.	ID=gene-C9F04_RS26085;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9F04_RS26085;old_locus_tag=C9F04_26995
NZ_PYKF01000832.1	Protein Homology	CDS	10246	11061	.	-	0	ID=cds-WP_000135632.1;Parent=gene-C9F04_RS26085;Dbxref=Genbank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9F04_RS26085;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	11070	11450	.	-	.	ID=gene-C9F04_RS26090;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9F04_RS26090;old_locus_tag=C9F04_27000
NZ_PYKF01000832.1	Protein Homology	CDS	11070	11450	.	-	0	ID=cds-WP_000116685.1;Parent=gene-C9F04_RS26090;Dbxref=Genbank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9F04_RS26090;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	12066	12689	.	-	.	ID=gene-C9F04_RS26095;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9F04_RS26095;old_locus_tag=C9F04_27005
NZ_PYKF01000832.1	Protein Homology	CDS	12066	12689	.	-	0	ID=cds-WP_001519938.1;Parent=gene-C9F04_RS26095;Dbxref=Genbank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9F04_RS26095;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	12792	14681	.	-	.	ID=gene-C9F04_RS26100;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9F04_RS26100;old_locus_tag=C9F04_27010
NZ_PYKF01000832.1	Protein Homology	CDS	12792	14681	.	-	0	ID=cds-WP_000499872.1;Parent=gene-C9F04_RS26100;Dbxref=Genbank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9F04_RS26100;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	15060	15503	.	-	.	ID=gene-C9F04_RS26105;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9F04_RS26105;old_locus_tag=C9F04_27020
NZ_PYKF01000832.1	Protein Homology	CDS	15060	15503	.	-	0	ID=cds-WP_001518982.1;Parent=gene-C9F04_RS26105;Dbxref=Genbank:WP_001518982.1;Name=WP_001518982.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9F04_RS26105;product=FMN-binding protein MioC;protein_id=WP_001518982.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	15593	16051	.	-	.	ID=gene-C9F04_RS26110;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9F04_RS26110;old_locus_tag=C9F04_27025
NZ_PYKF01000832.1	Protein Homology	CDS	15593	16051	.	-	0	ID=cds-WP_000433018.1;Parent=gene-C9F04_RS26110;Dbxref=Genbank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9F04_RS26110;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	gene	16202	17194	.	+	.	ID=gene-C9F04_RS26115;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9F04_RS26115;old_locus_tag=C9F04_27030
NZ_PYKF01000832.1	Protein Homology	CDS	16202	17194	.	+	0	ID=cds-WP_000845123.1;Parent=gene-C9F04_RS26115;Dbxref=Genbank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9F04_RS26115;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11
NZ_PYKF01000832.1	RefSeq	pseudogene	17199	17497	.	-	.	ID=gene-C9F04_RS26120;Name=C9F04_RS26120;end_range=17497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26120;old_locus_tag=C9F04_27035;partial=true;pseudo=true
NZ_PYKF01000832.1	Protein Homology	CDS	17199	17497	.	-	2	ID=cds-C9F04_RS26120;Parent=gene-C9F04_RS26120;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=17497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9F04_RS26120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000553.1 1 2895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000553.1	RefSeq	region	1	2895	.	+	.	ID=NZ_PYKF01000553.1:1..2895;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000553.1	RefSeq	gene	308	1684	.	-	.	ID=gene-C9F04_RS16605;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9F04_RS16605;old_locus_tag=C9F04_17120
NZ_PYKF01000553.1	Protein Homology	CDS	308	1684	.	-	0	ID=cds-WP_146712895.1;Parent=gene-C9F04_RS16605;Dbxref=Genbank:WP_146712895.1;Name=WP_146712895.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9F04_RS16605;product=argininosuccinate lyase;protein_id=WP_146712895.1;transl_table=11
NZ_PYKF01000553.1	RefSeq	gene	1802	2578	.	-	.	ID=gene-C9F04_RS16610;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9F04_RS16610;old_locus_tag=C9F04_17125
NZ_PYKF01000553.1	Protein Homology	CDS	1802	2578	.	-	0	ID=cds-WP_146712896.1;Parent=gene-C9F04_RS16610;Dbxref=Genbank:WP_146712896.1;Name=WP_146712896.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9F04_RS16610;product=acetylglutamate kinase;protein_id=WP_146712896.1;transl_table=11
NZ_PYKF01000553.1	RefSeq	gene	2586	2895	.	-	.	ID=gene-C9F04_RS16615;Name=C9F04_RS16615;end_range=2895,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16615;old_locus_tag=C9F04_17130;partial=true
NZ_PYKF01000553.1	Protein Homology	CDS	2586	2895	.	-	1	ID=cds-WP_261771316.1;Parent=gene-C9F04_RS16615;Dbxref=Genbank:WP_261771316.1;Name=WP_261771316.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;end_range=2895,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312914.1;locus_tag=C9F04_RS16615;partial=true;product=Asd/ArgC dimerization domain-containing protein;protein_id=WP_261771316.1;transl_table=11
##sequence-region NZ_PYKF01000320.1 1 2827
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000320.1	RefSeq	region	1	2827	.	+	.	ID=NZ_PYKF01000320.1:1..2827;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000320.1	RefSeq	pseudogene	48	389	.	+	.	ID=gene-C9F04_RS09380;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F04_RS09380;old_locus_tag=C9F04_09690;partial=true;pseudo=true;start_range=.,48
NZ_PYKF01000320.1	Protein Homology	CDS	48	389	.	+	0	ID=cds-C9F04_RS09380;Parent=gene-C9F04_RS09380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F04_RS09380;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;start_range=.,48;transl_table=11
NZ_PYKF01000320.1	RefSeq	gene	392	1708	.	+	.	ID=gene-C9F04_RS09385;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9F04_RS09385;old_locus_tag=C9F04_09695
NZ_PYKF01000320.1	Protein Homology	CDS	392	1708	.	+	0	ID=cds-WP_146712541.1;Parent=gene-C9F04_RS09385;Dbxref=Genbank:WP_146712541.1;Name=WP_146712541.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F04_RS09385;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_146712541.1;transl_table=11
NZ_PYKF01000320.1	RefSeq	gene	1708	2827	.	+	.	ID=gene-C9F04_RS09390;Name=ftsW;end_range=2827,.;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9F04_RS09390;old_locus_tag=C9F04_09700;partial=true
NZ_PYKF01000320.1	Protein Homology	CDS	1708	2827	.	+	0	ID=cds-WP_146712542.1;Parent=gene-C9F04_RS09390;Dbxref=Genbank:WP_146712542.1;Name=WP_146712542.1;Ontology_term=GO:0051301;end_range=2827,.;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9F04_RS09390;partial=true;product=cell division protein FtsW;protein_id=WP_146712542.1;transl_table=11
##sequence-region NZ_PYKF01000392.1 1 2817
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000392.1	RefSeq	region	1	2817	.	+	.	ID=NZ_PYKF01000392.1:1..2817;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000392.1	RefSeq	pseudogene	1	550	.	+	.	ID=gene-C9F04_RS11505;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=pseudogene;locus_tag=C9F04_RS11505;old_locus_tag=C9F04_11895;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000392.1	Protein Homology	CDS	1	550	.	+	1	ID=cds-C9F04_RS11505;Parent=gene-C9F04_RS11505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F04_RS11505;partial=true;product=propanediol dehydratase reactivase alpha subunit PduG;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000392.1	RefSeq	gene	540	890	.	+	.	ID=gene-C9F04_RS11510;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9F04_RS11510;old_locus_tag=C9F04_11900
NZ_PYKF01000392.1	Protein Homology	CDS	540	890	.	+	0	ID=cds-WP_000377965.1;Parent=gene-C9F04_RS11510;Dbxref=Genbank:WP_000377965.1;Name=WP_000377965.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9F04_RS11510;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377965.1;transl_table=11
NZ_PYKF01000392.1	RefSeq	gene	909	1184	.	+	.	ID=gene-C9F04_RS11515;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9F04_RS11515;old_locus_tag=C9F04_11905
NZ_PYKF01000392.1	Protein Homology	CDS	909	1184	.	+	0	ID=cds-WP_001057755.1;Parent=gene-C9F04_RS11515;Dbxref=Genbank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9F04_RS11515;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11
NZ_PYKF01000392.1	RefSeq	gene	1188	1670	.	+	.	ID=gene-C9F04_RS11520;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9F04_RS11520;old_locus_tag=C9F04_11910
NZ_PYKF01000392.1	Protein Homology	CDS	1188	1670	.	+	0	ID=cds-WP_078054881.1;Parent=gene-C9F04_RS11520;Dbxref=Genbank:WP_078054881.1;Name=WP_078054881.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9F04_RS11520;product=propanediol utilization microcompartment protein PduK;protein_id=WP_078054881.1;transl_table=11
NZ_PYKF01000392.1	RefSeq	gene	1670	2302	.	+	.	ID=gene-C9F04_RS11525;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=C9F04_RS11525;old_locus_tag=C9F04_11915
NZ_PYKF01000392.1	Protein Homology	CDS	1670	2302	.	+	0	ID=cds-WP_000356732.1;Parent=gene-C9F04_RS11525;Dbxref=Genbank:WP_000356732.1;Name=WP_000356732.1;gbkey=CDS;gene=pduL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9F04_RS11525;product=phosphate propanoyltransferase;protein_id=WP_000356732.1;transl_table=11
NZ_PYKF01000392.1	RefSeq	gene	2299	2775	.	+	.	ID=gene-C9F04_RS11530;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9F04_RS11530;old_locus_tag=C9F04_11920
NZ_PYKF01000392.1	Protein Homology	CDS	2299	2775	.	+	0	ID=cds-WP_146712655.1;Parent=gene-C9F04_RS11530;Dbxref=Genbank:WP_146712655.1;Name=WP_146712655.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9F04_RS11530;product=propanediol utilization microcompartment protein PduM;protein_id=WP_146712655.1;transl_table=11
##sequence-region NZ_PYKF01000251.1 1 2811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000251.1	RefSeq	region	1	2811	.	+	.	ID=NZ_PYKF01000251.1:1..2811;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000251.1	RefSeq	pseudogene	1	341	.	-	.	ID=gene-C9F04_RS06855;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=pseudogene;locus_tag=C9F04_RS06855;old_locus_tag=C9F04_07080;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000251.1	Protein Homology	CDS	1	341	.	-	0	ID=cds-C9F04_RS06855;Parent=gene-C9F04_RS06855;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F04_RS06855;partial=true;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000251.1	RefSeq	gene	444	881	.	+	.	ID=gene-C9F04_RS06860;Name=C9F04_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06860;old_locus_tag=C9F04_07085
NZ_PYKF01000251.1	Protein Homology	CDS	444	881	.	+	0	ID=cds-WP_000203998.1;Parent=gene-C9F04_RS06860;Dbxref=Genbank:WP_000203998.1;Name=WP_000203998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9F04_RS06860;product=DNA polymerase III subunit psi;protein_id=WP_000203998.1;transl_table=11
NZ_PYKF01000251.1	RefSeq	gene	826	1272	.	+	.	ID=gene-C9F04_RS06865;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9F04_RS06865;old_locus_tag=C9F04_07090
NZ_PYKF01000251.1	Protein Homology	CDS	826	1272	.	+	0	ID=cds-WP_001092435.1;Parent=gene-C9F04_RS06865;Dbxref=Genbank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9F04_RS06865;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11
NZ_PYKF01000251.1	RefSeq	gene	1294	1971	.	+	.	ID=gene-C9F04_RS06870;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9F04_RS06870;old_locus_tag=C9F04_07095
NZ_PYKF01000251.1	Protein Homology	CDS	1294	1971	.	+	0	ID=cds-WP_000870686.1;Parent=gene-C9F04_RS06870;Dbxref=Genbank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9F04_RS06870;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11
NZ_PYKF01000251.1	RefSeq	pseudogene	2063	2737	.	+	.	ID=gene-C9F04_RS06875;Name=prfC;end_range=2737,.;gbkey=Gene;gene=prfC;gene_biotype=pseudogene;locus_tag=C9F04_RS06875;old_locus_tag=C9F04_07100;partial=true;pseudo=true
NZ_PYKF01000251.1	Protein Homology	CDS	2063	2737	.	+	0	ID=cds-C9F04_RS06875;Parent=gene-C9F04_RS06875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006415,GO:0003747,GO:0005525;end_range=2737,.;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9F04_RS06875;partial=true;product=peptide chain release factor 3;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000577.1 1 2810
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000577.1	RefSeq	region	1	2810	.	+	.	ID=NZ_PYKF01000577.1:1..2810;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000577.1	RefSeq	gene	682	771	.	-	.	ID=gene-C9F04_RS17230;Name=C9F04_RS17230;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS17230;old_locus_tag=C9F04_17790
NZ_PYKF01000577.1	tRNAscan-SE	tRNA	682	771	.	-	.	ID=rna-C9F04_RS17230;Parent=gene-C9F04_RS17230;anticodon=(pos:complement(735..737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17230;product=tRNA-Ser
NZ_PYKF01000577.1	tRNAscan-SE	exon	682	771	.	-	.	ID=exon-C9F04_RS17230-1;Parent=rna-C9F04_RS17230;anticodon=(pos:complement(735..737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17230;product=tRNA-Ser
NZ_PYKF01000577.1	RefSeq	gene	860	1657	.	+	.	ID=gene-C9F04_RS17235;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9F04_RS17235;old_locus_tag=C9F04_17795
NZ_PYKF01000577.1	Protein Homology	CDS	860	1657	.	+	0	ID=cds-WP_135369608.1;Parent=gene-C9F04_RS17235;Dbxref=Genbank:WP_135369608.1;Name=WP_135369608.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9F04_RS17235;product=DgsA anti-repressor MtfA;protein_id=WP_135369608.1;transl_table=11
NZ_PYKF01000577.1	RefSeq	gene	1758	1833	.	+	.	ID=gene-C9F04_RS17240;Name=C9F04_RS17240;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS17240;old_locus_tag=C9F04_17800
NZ_PYKF01000577.1	tRNAscan-SE	tRNA	1758	1833	.	+	.	ID=rna-C9F04_RS17240;Parent=gene-C9F04_RS17240;anticodon=(pos:1791..1793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17240;product=tRNA-Asn
NZ_PYKF01000577.1	tRNAscan-SE	exon	1758	1833	.	+	.	ID=exon-C9F04_RS17240-1;Parent=rna-C9F04_RS17240;anticodon=(pos:1791..1793);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS17240;product=tRNA-Asn
NZ_PYKF01000577.1	RefSeq	pseudogene	2001	2306	.	+	.	ID=gene-C9F04_RS17245;Name=C9F04_RS17245;end_range=2306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17245;old_locus_tag=C9F04_17805;partial=true;pseudo=true
NZ_PYKF01000577.1	Protein Homology	CDS	2001	2306	.	+	0	ID=cds-C9F04_RS17245;Parent=gene-C9F04_RS17245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9F04_RS17245;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000283.1 1 2807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000283.1	RefSeq	region	1	2807	.	+	.	ID=NZ_PYKF01000283.1:1..2807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000283.1	RefSeq	gene	1	589	.	+	.	ID=gene-C9F04_RS08165;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9F04_RS08165;old_locus_tag=C9F04_08440;partial=true;start_range=.,1
NZ_PYKF01000283.1	Protein Homology	CDS	1	589	.	+	1	ID=cds-WP_146712494.1;Parent=gene-C9F04_RS08165;Dbxref=Genbank:WP_146712494.1;Name=WP_146712494.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9F04_RS08165;partial=true;product=type I pantothenate kinase;protein_id=WP_146712494.1;start_range=.,1;transl_table=11
NZ_PYKF01000283.1	RefSeq	gene	625	1587	.	-	.	ID=gene-C9F04_RS08170;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9F04_RS08170;old_locus_tag=C9F04_08445
NZ_PYKF01000283.1	Protein Homology	CDS	625	1587	.	-	0	ID=cds-WP_000655746.1;Parent=gene-C9F04_RS08170;Dbxref=Genbank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9F04_RS08170;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11
NZ_PYKF01000283.1	RefSeq	gene	1584	2612	.	-	.	ID=gene-C9F04_RS08175;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9F04_RS08175;old_locus_tag=C9F04_08450
NZ_PYKF01000283.1	Protein Homology	CDS	1584	2612	.	-	0	ID=cds-WP_135369316.1;Parent=gene-C9F04_RS08175;Dbxref=Genbank:WP_135369316.1;Name=WP_135369316.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9F04_RS08175;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_135369316.1;transl_table=11
##sequence-region NZ_PYKF01000042.1 1 2773
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000042.1	RefSeq	region	1	2773	.	+	.	ID=NZ_PYKF01000042.1:1..2773;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000042.1	RefSeq	pseudogene	1	761	.	+	.	ID=gene-C9F04_RS00605;Name=galP;gbkey=Gene;gene=galP;gene_biotype=pseudogene;locus_tag=C9F04_RS00605;old_locus_tag=C9F04_00650;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000042.1	Protein Homology	CDS	1	761	.	+	2	ID=cds-C9F04_RS00605;Parent=gene-C9F04_RS00605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9F04_RS00605;partial=true;product=galactose/proton symporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000042.1	RefSeq	gene	840	1337	.	+	.	ID=gene-C9F04_RS00610;Name=C9F04_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00610;old_locus_tag=C9F04_00655
NZ_PYKF01000042.1	Protein Homology	CDS	840	1337	.	+	0	ID=cds-WP_000856775.1;Parent=gene-C9F04_RS00610;Dbxref=Genbank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9F04_RS00610;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11
NZ_PYKF01000042.1	RefSeq	gene	1433	2140	.	+	.	ID=gene-C9F04_RS00615;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9F04_RS00615;old_locus_tag=C9F04_00660
NZ_PYKF01000042.1	Protein Homology	CDS	1433	2140	.	+	0	ID=cds-WP_000286133.1;Parent=gene-C9F04_RS00615;Dbxref=Genbank:WP_000286133.1;Name=WP_000286133.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9F04_RS00615;product=deoxyribonuclease I;protein_id=WP_000286133.1;transl_table=11
NZ_PYKF01000042.1	RefSeq	gene	2217	2773	.	+	.	ID=gene-C9F04_RS00620;Name=rsmE;end_range=2773,.;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9F04_RS00620;old_locus_tag=C9F04_00665;partial=true
NZ_PYKF01000042.1	Protein Homology	CDS	2217	2773	.	+	0	ID=cds-WP_146712159.1;Parent=gene-C9F04_RS00620;Dbxref=Genbank:WP_146712159.1;Name=WP_146712159.1;Ontology_term=GO:0006364,GO:0008168;end_range=2773,.;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9F04_RS00620;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_146712159.1;transl_table=11
##sequence-region NZ_PYKF01000033.1 1 2767
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000033.1	RefSeq	region	1	2767	.	+	.	ID=NZ_PYKF01000033.1:1..2767;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000033.1	RefSeq	pseudogene	1	1306	.	+	.	ID=gene-C9F04_RS00495;Name=C9F04_RS00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00495;old_locus_tag=C9F04_00525;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000033.1	Protein Homology	CDS	1	1306	.	+	1	ID=cds-C9F04_RS00495;Parent=gene-C9F04_RS00495;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F04_RS00495;partial=true;product=formate dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000033.1	RefSeq	gene	1319	2221	.	+	.	ID=gene-C9F04_RS00500;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F04_RS00500;old_locus_tag=C9F04_00530
NZ_PYKF01000033.1	Protein Homology	CDS	1319	2221	.	+	0	ID=cds-WP_000331361.1;Parent=gene-C9F04_RS00500;Dbxref=Genbank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9F04_RS00500;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11
NZ_PYKF01000033.1	RefSeq	pseudogene	2218	2767	.	+	.	ID=gene-C9F04_RS00505;Name=fdoI;end_range=2767,.;gbkey=Gene;gene=fdoI;gene_biotype=pseudogene;locus_tag=C9F04_RS00505;old_locus_tag=C9F04_00535;partial=true;pseudo=true
NZ_PYKF01000033.1	Protein Homology	CDS	2218	2767	.	+	0	ID=cds-C9F04_RS00505;Parent=gene-C9F04_RS00505;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=2767,.;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9F04_RS00505;partial=true;product=formate dehydrogenase cytochrome b556 subunit;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000532.1 1 2765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000532.1	RefSeq	region	1	2765	.	+	.	ID=NZ_PYKF01000532.1:1..2765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000532.1	RefSeq	gene	1	449	.	-	.	ID=gene-C9F04_RS15935;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9F04_RS15935;old_locus_tag=C9F04_16430;partial=true;start_range=.,1
NZ_PYKF01000532.1	Protein Homology	CDS	1	449	.	-	0	ID=cds-WP_146712864.1;Parent=gene-C9F04_RS15935;Dbxref=Genbank:WP_146712864.1;Name=WP_146712864.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9F04_RS15935;partial=true;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_146712864.1;start_range=.,1;transl_table=11
NZ_PYKF01000532.1	RefSeq	gene	455	1594	.	-	.	ID=gene-C9F04_RS15940;Name=C9F04_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15940;old_locus_tag=C9F04_16435
NZ_PYKF01000532.1	Protein Homology	CDS	455	1594	.	-	0	ID=cds-WP_000978077.1;Parent=gene-C9F04_RS15940;Dbxref=Genbank:WP_000978077.1;Name=WP_000978077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9F04_RS15940;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11
NZ_PYKF01000532.1	RefSeq	gene	2269	2765	.	+	.	ID=gene-C9F04_RS15945;Name=C9F04_RS15945;end_range=2765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15945;old_locus_tag=C9F04_16445;partial=true
NZ_PYKF01000532.1	Protein Homology	CDS	2269	2765	.	+	0	ID=cds-WP_146712865.1;Parent=gene-C9F04_RS15945;Dbxref=Genbank:WP_146712865.1;Name=WP_146712865.1;end_range=2765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9F04_RS15945;partial=true;product=TerC family protein;protein_id=WP_146712865.1;transl_table=11
##sequence-region NZ_PYKF01000379.1 1 2737
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000379.1	RefSeq	region	1	2737	.	+	.	ID=NZ_PYKF01000379.1:1..2737;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000379.1	RefSeq	pseudogene	1	236	.	+	.	ID=gene-C9F04_RS11155;Name=C9F04_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11155;old_locus_tag=C9F04_11520;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000379.1	Protein Homology	CDS	1	236	.	+	2	ID=cds-C9F04_RS11155;Parent=gene-C9F04_RS11155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954548.1;locus_tag=C9F04_RS11155;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000379.1	RefSeq	gene	349	1353	.	+	.	ID=gene-C9F04_RS11160;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9F04_RS11160;old_locus_tag=C9F04_11525
NZ_PYKF01000379.1	Protein Homology	CDS	349	1353	.	+	0	ID=cds-WP_000723876.1;Parent=gene-C9F04_RS11160;Dbxref=Genbank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9F04_RS11160;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11
NZ_PYKF01000379.1	RefSeq	gene	1354	1953	.	+	.	ID=gene-C9F04_RS11165;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9F04_RS11165;old_locus_tag=C9F04_11530
NZ_PYKF01000379.1	Protein Homology	CDS	1354	1953	.	+	0	ID=cds-WP_146712641.1;Parent=gene-C9F04_RS11165;Dbxref=Genbank:WP_146712641.1;Name=WP_146712641.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9F04_RS11165;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_146712641.1;transl_table=11
NZ_PYKF01000379.1	RefSeq	gene	2346	2737	.	+	.	ID=gene-C9F04_RS11175;Name=accB;end_range=2737,.;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9F04_RS11175;old_locus_tag=C9F04_11535;partial=true
NZ_PYKF01000379.1	Protein Homology	CDS	2346	2737	.	+	0	ID=cds-WP_146712642.1;Parent=gene-C9F04_RS11175;Dbxref=Genbank:WP_146712642.1;Name=WP_146712642.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;end_range=2737,.;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455472.1;locus_tag=C9F04_RS11175;partial=true;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_146712642.1;transl_table=11
##sequence-region NZ_PYKF01000840.1 1 17270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000840.1	RefSeq	region	1	17270	.	+	.	ID=NZ_PYKF01000840.1:1..17270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000840.1	RefSeq	gene	1	667	.	-	.	ID=gene-C9F04_RS26380;Name=C9F04_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26380;old_locus_tag=C9F04_27300;partial=true;start_range=.,1
NZ_PYKF01000840.1	Protein Homology	CDS	1	667	.	-	0	ID=cds-WP_146713389.1;Parent=gene-C9F04_RS26380;Dbxref=Genbank:WP_146713389.1;Name=WP_146713389.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9F04_RS26380;partial=true;product=amino acid permease;protein_id=WP_146713389.1;start_range=.,1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	993	2168	.	+	.	ID=gene-C9F04_RS26385;Name=C9F04_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26385;old_locus_tag=C9F04_27305
NZ_PYKF01000840.1	Protein Homology	CDS	993	2168	.	+	0	ID=cds-WP_146713390.1;Parent=gene-C9F04_RS26385;Dbxref=Genbank:WP_146713390.1;Name=WP_146713390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F04_RS26385;product=DNA repair protein;protein_id=WP_146713390.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	2247	2807	.	-	.	ID=gene-C9F04_RS26390;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9F04_RS26390;old_locus_tag=C9F04_27310
NZ_PYKF01000840.1	Protein Homology	CDS	2247	2807	.	-	0	ID=cds-WP_000362177.1;Parent=gene-C9F04_RS26390;Dbxref=Genbank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9F04_RS26390;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	2820	3056	.	-	.	ID=gene-C9F04_RS26395;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9F04_RS26395;old_locus_tag=C9F04_27315
NZ_PYKF01000840.1	Protein Homology	CDS	2820	3056	.	-	0	ID=cds-WP_000922170.1;Parent=gene-C9F04_RS26395;Dbxref=Genbank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9F04_RS26395;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	3213	4538	.	-	.	ID=gene-C9F04_RS26400;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9F04_RS26400;old_locus_tag=C9F04_27320
NZ_PYKF01000840.1	Protein Homology	CDS	3213	4538	.	-	0	ID=cds-WP_000195929.1;Parent=gene-C9F04_RS26400;Dbxref=Genbank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F04_RS26400;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	4754	5608	.	+	.	ID=gene-C9F04_RS26405;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9F04_RS26405;old_locus_tag=C9F04_27325
NZ_PYKF01000840.1	Protein Homology	CDS	4754	5608	.	+	0	ID=cds-WP_135369285.1;Parent=gene-C9F04_RS26405;Dbxref=Genbank:WP_135369285.1;Name=WP_135369285.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9F04_RS26405;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_135369285.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	5659	5757	.	-	.	ID=gene-C9F04_RS26410;Name=C9F04_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26410
NZ_PYKF01000840.1	GeneMarkS-2+	CDS	5659	5757	.	-	0	ID=cds-WP_146713391.1;Parent=gene-C9F04_RS26410;Dbxref=Genbank:WP_146713391.1;Name=WP_146713391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26410;product=cation transporter;protein_id=WP_146713391.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	pseudogene	5769	5945	.	+	.	ID=gene-C9F04_RS26415;Name=C9F04_RS26415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26415;old_locus_tag=C9F04_27330;partial=true;pseudo=true;start_range=.,5769
NZ_PYKF01000840.1	Protein Homology	CDS	5769	5945	.	+	0	ID=cds-C9F04_RS26415;Parent=gene-C9F04_RS26415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=C9F04_RS26415;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,5769;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	6145	6390	.	+	.	ID=gene-C9F04_RS26420;Name=C9F04_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26420;old_locus_tag=C9F04_27335
NZ_PYKF01000840.1	GeneMarkS-2+	CDS	6145	6390	.	+	0	ID=cds-WP_061383624.1;Parent=gene-C9F04_RS26420;Dbxref=Genbank:WP_061383624.1;Name=WP_061383624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26420;product=hypothetical protein;protein_id=WP_061383624.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	6814	7176	.	+	.	ID=gene-C9F04_RS26425;Name=C9F04_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26425;old_locus_tag=C9F04_27340
NZ_PYKF01000840.1	Protein Homology	CDS	6814	7176	.	+	0	ID=cds-WP_000915520.1;Parent=gene-C9F04_RS26425;Dbxref=Genbank:WP_000915520.1;Name=WP_000915520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=C9F04_RS26425;product=GtrA family protein;protein_id=WP_000915520.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	7173	8099	.	+	.	ID=gene-C9F04_RS26430;Name=C9F04_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26430;old_locus_tag=C9F04_27345
NZ_PYKF01000840.1	Protein Homology	CDS	7173	8099	.	+	0	ID=cds-WP_146713392.1;Parent=gene-C9F04_RS26430;Dbxref=Genbank:WP_146713392.1;Name=WP_146713392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9F04_RS26430;product=glycosyltransferase family 2 protein;protein_id=WP_146713392.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	8080	9732	.	+	.	ID=gene-C9F04_RS26435;Name=C9F04_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26435;old_locus_tag=C9F04_27350
NZ_PYKF01000840.1	Protein Homology	CDS	8080	9732	.	+	0	ID=cds-WP_010988978.1;Parent=gene-C9F04_RS26435;Dbxref=Genbank:WP_010988978.1;Name=WP_010988978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=C9F04_RS26435;product=DUF6056 family protein;protein_id=WP_010988978.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	10119	10337	.	+	.	ID=gene-C9F04_RS27310;Name=C9F04_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27310
NZ_PYKF01000840.1	Protein Homology	CDS	10119	10337	.	+	0	ID=cds-WP_240776455.1;Parent=gene-C9F04_RS27310;Dbxref=Genbank:WP_240776455.1;Name=WP_240776455.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=C9F04_RS27310;product=transposase;protein_id=WP_240776455.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	pseudogene	10393	10786	.	+	.	ID=gene-C9F04_RS27315;Name=C9F04_RS27315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27315;partial=true;pseudo=true;start_range=.,10393
NZ_PYKF01000840.1	Protein Homology	CDS	10393	10786	.	+	0	ID=cds-C9F04_RS27315;Parent=gene-C9F04_RS27315;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=C9F04_RS27315;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,10393;transl_table=11
NZ_PYKF01000840.1	RefSeq	pseudogene	10755	10853	.	+	.	ID=gene-C9F04_RS27320;Name=C9F04_RS27320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27320;partial=true;pseudo=true;start_range=.,10755
NZ_PYKF01000840.1	Protein Homology	CDS	10755	10853	.	+	0	ID=cds-C9F04_RS27320;Parent=gene-C9F04_RS27320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599930.1;locus_tag=C9F04_RS27320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10755;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	10880	10956	.	-	.	ID=gene-C9F04_RS26445;Name=C9F04_RS26445;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS26445;old_locus_tag=C9F04_27360
NZ_PYKF01000840.1	tRNAscan-SE	tRNA	10880	10956	.	-	.	ID=rna-C9F04_RS26445;Parent=gene-C9F04_RS26445;anticodon=(pos:complement(10920..10922));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS26445;product=tRNA-Arg
NZ_PYKF01000840.1	tRNAscan-SE	exon	10880	10956	.	-	.	ID=exon-C9F04_RS26445-1;Parent=rna-C9F04_RS26445;anticodon=(pos:complement(10920..10922));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS26445;product=tRNA-Arg
NZ_PYKF01000840.1	RefSeq	gene	11211	11807	.	+	.	ID=gene-C9F04_RS26455;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9F04_RS26455;old_locus_tag=C9F04_27370
NZ_PYKF01000840.1	Protein Homology	CDS	11211	11807	.	+	0	ID=cds-WP_000948629.1;Parent=gene-C9F04_RS26455;Dbxref=Genbank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9F04_RS26455;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	11969	12280	.	+	.	ID=gene-C9F04_RS26460;Name=C9F04_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26460;old_locus_tag=C9F04_27375
NZ_PYKF01000840.1	Protein Homology	CDS	11969	12280	.	+	0	ID=cds-WP_000226501.1;Parent=gene-C9F04_RS26460;Dbxref=Genbank:WP_000226501.1;Name=WP_000226501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9F04_RS26460;product=hypothetical protein;protein_id=WP_000226501.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	12299	13021	.	+	.	ID=gene-C9F04_RS26465;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9F04_RS26465;old_locus_tag=C9F04_27380
NZ_PYKF01000840.1	Protein Homology	CDS	12299	13021	.	+	0	ID=cds-WP_135369164.1;Parent=gene-C9F04_RS26465;Dbxref=Genbank:WP_135369164.1;Name=WP_135369164.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9F04_RS26465;product=fimbria biosynthesis regulator FimY;protein_id=WP_135369164.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	13625	14257	.	+	.	ID=gene-C9F04_RS26470;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9F04_RS26470;old_locus_tag=C9F04_27385
NZ_PYKF01000840.1	Protein Homology	CDS	13625	14257	.	+	0	ID=cds-WP_000801272.1;Parent=gene-C9F04_RS26470;Dbxref=Genbank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9F04_RS26470;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	14303	14821	.	-	.	ID=gene-C9F04_RS26475;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9F04_RS26475;old_locus_tag=C9F04_27390
NZ_PYKF01000840.1	Protein Homology	CDS	14303	14821	.	-	0	ID=cds-WP_000603405.1;Parent=gene-C9F04_RS26475;Dbxref=Genbank:WP_000603405.1;Name=WP_000603405.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9F04_RS26475;product=fimbria assembly protein;protein_id=WP_000603405.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	14831	15838	.	-	.	ID=gene-C9F04_RS26480;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9F04_RS26480;old_locus_tag=C9F04_27395
NZ_PYKF01000840.1	Protein Homology	CDS	14831	15838	.	-	0	ID=cds-WP_094963764.1;Parent=gene-C9F04_RS26480;Dbxref=Genbank:WP_094963764.1;Name=WP_094963764.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9F04_RS26480;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_094963764.1;transl_table=11
NZ_PYKF01000840.1	RefSeq	gene	15853	17270	.	-	.	ID=gene-C9F04_RS26485;Name=fimD;end_range=17270,.;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=C9F04_RS26485;old_locus_tag=C9F04_27400;partial=true
NZ_PYKF01000840.1	Protein Homology	CDS	15853	17270	.	-	2	ID=cds-WP_146713393.1;Parent=gene-C9F04_RS26485;Dbxref=Genbank:WP_146713393.1;Name=WP_146713393.1;end_range=17270,.;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F04_RS26485;partial=true;product=outer membrane usher protein FimD;protein_id=WP_146713393.1;transl_table=11
##sequence-region NZ_PYKF01000728.1 1 2735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000728.1	RefSeq	region	1	2735	.	+	.	ID=NZ_PYKF01000728.1:1..2735;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000728.1	RefSeq	gene	1	422	.	+	.	ID=gene-C9F04_RS22650;Name=C9F04_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22650;old_locus_tag=C9F04_23410;partial=true;start_range=.,1
NZ_PYKF01000728.1	Protein Homology	CDS	1	422	.	+	2	ID=cds-WP_146713213.1;Parent=gene-C9F04_RS22650;Dbxref=Genbank:WP_146713213.1;Name=WP_146713213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9F04_RS22650;partial=true;product=DUF4310 family protein;protein_id=WP_146713213.1;start_range=.,1;transl_table=11
NZ_PYKF01000728.1	RefSeq	gene	481	1614	.	+	.	ID=gene-C9F04_RS22655;Name=C9F04_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22655;old_locus_tag=C9F04_23415
NZ_PYKF01000728.1	Protein Homology	CDS	481	1614	.	+	0	ID=cds-WP_135369738.1;Parent=gene-C9F04_RS22655;Dbxref=Genbank:WP_135369738.1;Name=WP_135369738.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9F04_RS22655;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_135369738.1;transl_table=11
NZ_PYKF01000728.1	RefSeq	gene	1598	2735	.	+	.	ID=gene-C9F04_RS22660;Name=C9F04_RS22660;end_range=2735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22660;old_locus_tag=C9F04_23420;partial=true
NZ_PYKF01000728.1	Protein Homology	CDS	1598	2735	.	+	0	ID=cds-WP_146713214.1;Parent=gene-C9F04_RS22660;Dbxref=Genbank:WP_146713214.1;Name=WP_146713214.1;end_range=2735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9F04_RS22660;partial=true;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_146713214.1;transl_table=11
##sequence-region NZ_PYKF01000166.1 1 2733
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000166.1	RefSeq	region	1	2733	.	+	.	ID=NZ_PYKF01000166.1:1..2733;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000166.1	RefSeq	pseudogene	1	903	.	-	.	ID=gene-C9F04_RS03470;Name=C9F04_RS03470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03470;old_locus_tag=C9F04_03580;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000166.1	Protein Homology	CDS	1	903	.	-	0	ID=cds-C9F04_RS03470;Parent=gene-C9F04_RS03470;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F04_RS03470;partial=true;product=transketolase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000166.1	RefSeq	gene	923	1873	.	-	.	ID=gene-C9F04_RS03475;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F04_RS03475;old_locus_tag=C9F04_03585
NZ_PYKF01000166.1	Protein Homology	CDS	923	1873	.	-	0	ID=cds-WP_001072436.1;Parent=gene-C9F04_RS03475;Dbxref=Genbank:WP_001072436.1;Name=WP_001072436.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9F04_RS03475;product=transaldolase;protein_id=WP_001072436.1;transl_table=11
NZ_PYKF01000166.1	RefSeq	pseudogene	2145	2733	.	+	.	ID=gene-C9F04_RS03480;Name=maeB;end_range=2733,.;gbkey=Gene;gene=maeB;gene_biotype=pseudogene;locus_tag=C9F04_RS03480;old_locus_tag=C9F04_03595;partial=true;pseudo=true
NZ_PYKF01000166.1	Protein Homology	CDS	2145	2733	.	+	0	ID=cds-C9F04_RS03480;Parent=gene-C9F04_RS03480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2733,.;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9F04_RS03480;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000129.1 1 2731
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000129.1	RefSeq	region	1	2731	.	+	.	ID=NZ_PYKF01000129.1:1..2731;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000129.1	RefSeq	gene	1	1105	.	-	.	ID=gene-C9F04_RS02470;Name=C9F04_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02470;old_locus_tag=C9F04_02555;partial=true;start_range=.,1
NZ_PYKF01000129.1	Protein Homology	CDS	1	1105	.	-	0	ID=cds-WP_146712240.1;Parent=gene-C9F04_RS02470;Dbxref=Genbank:WP_146712240.1;Name=WP_146712240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9F04_RS02470;partial=true;product=DEAD/DEAH box helicase;protein_id=WP_146712240.1;start_range=.,1;transl_table=11
NZ_PYKF01000129.1	RefSeq	gene	1257	1952	.	+	.	ID=gene-C9F04_RS02475;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9F04_RS02475;old_locus_tag=C9F04_02560
NZ_PYKF01000129.1	Protein Homology	CDS	1257	1952	.	+	0	ID=cds-WP_001234836.1;Parent=gene-C9F04_RS02475;Dbxref=Genbank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9F04_RS02475;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11
NZ_PYKF01000129.1	RefSeq	pseudogene	1980	2714	.	+	.	ID=gene-C9F04_RS02480;Name=C9F04_RS02480;end_range=2714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02480;old_locus_tag=C9F04_02565;partial=true;pseudo=true
NZ_PYKF01000129.1	Protein Homology	CDS	1980	2714	.	+	0	ID=cds-C9F04_RS02480;Parent=gene-C9F04_RS02480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016021;end_range=2714,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311101.1;locus_tag=C9F04_RS02480;partial=true;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000012.1 1 2694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000012.1	RefSeq	region	1	2694	.	+	.	ID=NZ_PYKF01000012.1:1..2694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000012.1	RefSeq	pseudogene	103	1344	.	-	.	ID=gene-C9F04_RS00100;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=C9F04_RS00100;old_locus_tag=C9F04_00115;partial=true;pseudo=true;start_range=.,103
NZ_PYKF01000012.1	Protein Homology	CDS	103	1344	.	-	0	ID=cds-C9F04_RS00100;Parent=gene-C9F04_RS00100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9F04_RS00100;partial=true;product=alanine--tRNA ligase;pseudo=true;start_range=.,103;transl_table=11
NZ_PYKF01000012.1	RefSeq	gene	1580	2080	.	-	.	ID=gene-C9F04_RS00110;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9F04_RS00110;old_locus_tag=C9F04_00125
NZ_PYKF01000012.1	Protein Homology	CDS	1580	2080	.	-	0	ID=cds-WP_001294863.1;Parent=gene-C9F04_RS00110;Dbxref=Genbank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9F04_RS00110;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11
NZ_PYKF01000012.1	RefSeq	pseudogene	2197	2694	.	-	.	ID=gene-C9F04_RS00115;Name=recA;end_range=2694,.;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=C9F04_RS00115;old_locus_tag=C9F04_00130;partial=true;pseudo=true
NZ_PYKF01000012.1	Protein Homology	CDS	2197	2694	.	-	0	ID=cds-C9F04_RS00115;Parent=gene-C9F04_RS00115;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2694,.;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9F04_RS00115;partial=true;product=recombinase RecA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000649.1 1 2689
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000649.1	RefSeq	region	1	2689	.	+	.	ID=NZ_PYKF01000649.1:1..2689;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000649.1	RefSeq	gene	1	1050	.	-	.	ID=gene-C9F04_RS19915;Name=C9F04_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19915;old_locus_tag=C9F04_20570;partial=true;start_range=.,1
NZ_PYKF01000649.1	Protein Homology	CDS	1	1050	.	-	0	ID=cds-WP_146713067.1;Parent=gene-C9F04_RS19915;Dbxref=Genbank:WP_146713067.1;Name=WP_146713067.1;Ontology_term=GO:0019569,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process to xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9F04_RS19915;partial=true;product=ribulokinase;protein_id=WP_146713067.1;start_range=.,1;transl_table=11
NZ_PYKF01000649.1	RefSeq	gene	1391	2236	.	+	.	ID=gene-C9F04_RS19920;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9F04_RS19920;old_locus_tag=C9F04_20575
NZ_PYKF01000649.1	Protein Homology	CDS	1391	2236	.	+	0	ID=cds-WP_000852387.1;Parent=gene-C9F04_RS19920;Dbxref=Genbank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9F04_RS19920;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11
NZ_PYKF01000649.1	RefSeq	pseudogene	2355	2689	.	+	.	ID=gene-C9F04_RS19925;Name=C9F04_RS19925;end_range=2689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19925;old_locus_tag=C9F04_20580;partial=true;pseudo=true
NZ_PYKF01000649.1	Protein Homology	CDS	2355	2689	.	+	0	ID=cds-C9F04_RS19925;Parent=gene-C9F04_RS19925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9F04_RS19925;partial=true;product=DedA family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000508.1 1 2679
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000508.1	RefSeq	region	1	2679	.	+	.	ID=NZ_PYKF01000508.1:1..2679;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000508.1	RefSeq	pseudogene	1	142	.	+	.	ID=gene-C9F04_RS15220;Name=C9F04_RS15220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15220;old_locus_tag=C9F04_15705;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000508.1	Protein Homology	CDS	1	142	.	+	1	ID=cds-C9F04_RS15220;Parent=gene-C9F04_RS15220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9F04_RS15220;partial=true;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000508.1	RefSeq	gene	137	394	.	-	.	ID=gene-C9F04_RS15225;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9F04_RS15225;old_locus_tag=C9F04_15710
NZ_PYKF01000508.1	Protein Homology	CDS	137	394	.	-	0	ID=cds-WP_000455132.1;Parent=gene-C9F04_RS15225;Dbxref=Genbank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9F04_RS15225;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11
NZ_PYKF01000508.1	RefSeq	gene	492	1859	.	-	.	ID=gene-C9F04_RS15230;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9F04_RS15230;old_locus_tag=C9F04_15715
NZ_PYKF01000508.1	Protein Homology	CDS	492	1859	.	-	0	ID=cds-WP_146712828.1;Parent=gene-C9F04_RS15230;Dbxref=Genbank:WP_146712828.1;Name=WP_146712828.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9F04_RS15230;product=o-succinylbenzoate--CoA ligase;protein_id=WP_146712828.1;transl_table=11
NZ_PYKF01000508.1	RefSeq	gene	1856	2679	.	-	.	ID=gene-C9F04_RS15235;Name=menC;end_range=2679,.;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9F04_RS15235;old_locus_tag=C9F04_15720;partial=true
NZ_PYKF01000508.1	Protein Homology	CDS	1856	2679	.	-	2	ID=cds-WP_261771245.1;Parent=gene-C9F04_RS15235;Dbxref=Genbank:WP_261771245.1;Name=WP_261771245.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;end_range=2679,.;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9F04_RS15235;partial=true;product=o-succinylbenzoate synthase;protein_id=WP_261771245.1;transl_table=11
##sequence-region NZ_PYKF01000612.1 1 2671
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000612.1	RefSeq	region	1	2671	.	+	.	ID=NZ_PYKF01000612.1:1..2671;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000612.1	RefSeq	gene	1	717	.	+	.	ID=gene-C9F04_RS18410;Name=C9F04_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18410;old_locus_tag=C9F04_19015;partial=true;start_range=.,1
NZ_PYKF01000612.1	Protein Homology	CDS	1	717	.	+	0	ID=cds-WP_146712993.1;Parent=gene-C9F04_RS18410;Dbxref=Genbank:WP_146712993.1;Name=WP_146712993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F04_RS18410;partial=true;product=glucose-6-phosphate dehydrogenase (NADP(+));protein_id=WP_146712993.1;start_range=.,1;transl_table=11
NZ_PYKF01000612.1	RefSeq	pseudogene	952	2607	.	+	.	ID=gene-C9F04_RS18415;Name=edd;end_range=2607,.;gbkey=Gene;gene=edd;gene_biotype=pseudogene;locus_tag=C9F04_RS18415;old_locus_tag=C9F04_19020;partial=true;pseudo=true
NZ_PYKF01000612.1	Protein Homology	CDS	952	2607	.	+	0	ID=cds-C9F04_RS18415;Parent=gene-C9F04_RS18415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009255,GO:0004456;end_range=2607,.;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9F04_RS18415;partial=true;product=phosphogluconate dehydratase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000555.1 1 2668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000555.1	RefSeq	region	1	2668	.	+	.	ID=NZ_PYKF01000555.1:1..2668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000555.1	RefSeq	gene	85	624	.	+	.	ID=gene-C9F04_RS16630;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9F04_RS16630;old_locus_tag=C9F04_17145
NZ_PYKF01000555.1	Protein Homology	CDS	85	624	.	+	0	ID=cds-WP_135369045.1;Parent=gene-C9F04_RS16630;Dbxref=Genbank:WP_135369045.1;Name=WP_135369045.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9F04_RS16630;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_135369045.1;transl_table=11
NZ_PYKF01000555.1	RefSeq	gene	560	2047	.	+	.	ID=gene-C9F04_RS16635;Name=C9F04_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16635;old_locus_tag=C9F04_17150
NZ_PYKF01000555.1	Protein Homology	CDS	560	2047	.	+	0	ID=cds-WP_001736196.1;Parent=gene-C9F04_RS16635;Dbxref=Genbank:WP_001736196.1;Name=WP_001736196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9F04_RS16635;product=phospholipase D family protein;protein_id=WP_001736196.1;transl_table=11
NZ_PYKF01000555.1	RefSeq	gene	2064	2668	.	-	.	ID=gene-C9F04_RS16640;Name=C9F04_RS16640;end_range=2668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16640;old_locus_tag=C9F04_17155;partial=true
NZ_PYKF01000555.1	Protein Homology	CDS	2064	2668	.	-	2	ID=cds-WP_186799046.1;Parent=gene-C9F04_RS16640;Dbxref=Genbank:WP_186799046.1;Name=WP_186799046.1;Ontology_term=GO:0016747;end_range=2668,.;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9F04_RS16640;partial=true;product=acyltransferase family protein;protein_id=WP_186799046.1;transl_table=11
##sequence-region NZ_PYKF01000675.1 1 2655
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000675.1	RefSeq	region	1	2655	.	+	.	ID=NZ_PYKF01000675.1:1..2655;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000675.1	RefSeq	gene	1	1019	.	+	.	ID=gene-C9F04_RS20720;Name=C9F04_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20720;old_locus_tag=C9F04_21390;partial=true;start_range=.,1
NZ_PYKF01000675.1	Protein Homology	CDS	1	1019	.	+	2	ID=cds-WP_146713103.1;Parent=gene-C9F04_RS20720;Dbxref=Genbank:WP_146713103.1;Name=WP_146713103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9F04_RS20720;partial=true;product=ABC transporter permease;protein_id=WP_146713103.1;start_range=.,1;transl_table=11
NZ_PYKF01000675.1	RefSeq	gene	981	1391	.	-	.	ID=gene-C9F04_RS20725;Name=C9F04_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20725;old_locus_tag=C9F04_21395
NZ_PYKF01000675.1	Protein Homology	CDS	981	1391	.	-	0	ID=cds-WP_000871970.1;Parent=gene-C9F04_RS20725;Dbxref=Genbank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9F04_RS20725;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11
NZ_PYKF01000675.1	RefSeq	gene	1524	2282	.	+	.	ID=gene-C9F04_RS20730;Name=C9F04_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20730;old_locus_tag=C9F04_21400
NZ_PYKF01000675.1	Protein Homology	CDS	1524	2282	.	+	0	ID=cds-WP_000192039.1;Parent=gene-C9F04_RS20730;Dbxref=Genbank:WP_000192039.1;Name=WP_000192039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9F04_RS20730;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11
NZ_PYKF01000675.1	RefSeq	pseudogene	2279	2655	.	+	.	ID=gene-C9F04_RS20735;Name=C9F04_RS20735;end_range=2655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20735;old_locus_tag=C9F04_21405;partial=true;pseudo=true
NZ_PYKF01000675.1	Protein Homology	CDS	2279	2655	.	+	0	ID=cds-C9F04_RS20735;Parent=gene-C9F04_RS20735;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9F04_RS20735;partial=true;product=cardiolipin synthase B;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000518.1 1 2650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000518.1	RefSeq	region	1	2650	.	+	.	ID=NZ_PYKF01000518.1:1..2650;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000518.1	RefSeq	gene	250	365	.	+	.	ID=gene-C9F04_RS15490;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F04_RS15490;old_locus_tag=C9F04_15980
NZ_PYKF01000518.1	cmsearch	rRNA	250	365	.	+	.	ID=rna-C9F04_RS15490;Parent=gene-C9F04_RS15490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS15490;product=5S ribosomal RNA
NZ_PYKF01000518.1	cmsearch	exon	250	365	.	+	.	ID=exon-C9F04_RS15490-1;Parent=rna-C9F04_RS15490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS15490;product=5S ribosomal RNA
NZ_PYKF01000518.1	RefSeq	gene	557	633	.	+	.	ID=gene-C9F04_RS15495;Name=C9F04_RS15495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS15495;old_locus_tag=C9F04_15985
NZ_PYKF01000518.1	tRNAscan-SE	tRNA	557	633	.	+	.	ID=rna-C9F04_RS15495;Parent=gene-C9F04_RS15495;anticodon=(pos:591..593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS15495;product=tRNA-Asp
NZ_PYKF01000518.1	tRNAscan-SE	exon	557	633	.	+	.	ID=exon-C9F04_RS15495-1;Parent=rna-C9F04_RS15495;anticodon=(pos:591..593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS15495;product=tRNA-Asp
NZ_PYKF01000518.1	RefSeq	gene	642	717	.	+	.	ID=gene-C9F04_RS15500;Name=C9F04_RS15500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS15500;old_locus_tag=C9F04_15990
NZ_PYKF01000518.1	tRNAscan-SE	tRNA	642	717	.	+	.	ID=rna-C9F04_RS15500;Parent=gene-C9F04_RS15500;anticodon=(pos:675..677);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS15500;product=tRNA-Trp
NZ_PYKF01000518.1	tRNAscan-SE	exon	642	717	.	+	.	ID=exon-C9F04_RS15500-1;Parent=rna-C9F04_RS15500;anticodon=(pos:675..677);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS15500;product=tRNA-Trp
NZ_PYKF01000518.1	RefSeq	gene	818	1666	.	-	.	ID=gene-C9F04_RS15505;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9F04_RS15505;old_locus_tag=C9F04_15995
NZ_PYKF01000518.1	Protein Homology	CDS	818	1666	.	-	0	ID=cds-WP_001541181.1;Parent=gene-C9F04_RS15505;Dbxref=Genbank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9F04_RS15505;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11
NZ_PYKF01000518.1	RefSeq	gene	1773	2111	.	+	.	ID=gene-C9F04_RS15510;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9F04_RS15510;old_locus_tag=C9F04_16000
NZ_PYKF01000518.1	Protein Homology	CDS	1773	2111	.	+	0	ID=cds-WP_000840996.1;Parent=gene-C9F04_RS15510;Dbxref=Genbank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9F04_RS15510;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11
NZ_PYKF01000518.1	RefSeq	gene	2136	2650	.	-	.	ID=gene-C9F04_RS15515;Name=C9F04_RS15515;end_range=2650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15515;old_locus_tag=C9F04_16005;partial=true
NZ_PYKF01000518.1	Protein Homology	CDS	2136	2650	.	-	2	ID=cds-WP_186799039.1;Parent=gene-C9F04_RS15515;Dbxref=Genbank:WP_186799039.1;Name=WP_186799039.1;end_range=2650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F04_RS15515;partial=true;product=ATP-binding protein;protein_id=WP_186799039.1;transl_table=11
##sequence-region NZ_PYKF01000220.1 1 17153
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000220.1	RefSeq	region	1	17153	.	+	.	ID=NZ_PYKF01000220.1:1..17153;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000220.1	RefSeq	gene	1	671	.	-	.	ID=gene-C9F04_RS05490;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9F04_RS05490;old_locus_tag=C9F04_05660;partial=true;start_range=.,1
NZ_PYKF01000220.1	Protein Homology	CDS	1	671	.	-	0	ID=cds-WP_146712391.1;Parent=gene-C9F04_RS05490;Dbxref=Genbank:WP_146712391.1;Name=WP_146712391.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9F04_RS05490;partial=true;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_146712391.1;start_range=.,1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	822	2204	.	-	.	ID=gene-C9F04_RS05495;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9F04_RS05495;old_locus_tag=C9F04_05665
NZ_PYKF01000220.1	Protein Homology	CDS	822	2204	.	-	0	ID=cds-WP_001029710.1;Parent=gene-C9F04_RS05495;Dbxref=Genbank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9F04_RS05495;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	2288	3256	.	-	.	ID=gene-C9F04_RS05500;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F04_RS05500;old_locus_tag=C9F04_05670
NZ_PYKF01000220.1	Protein Homology	CDS	2288	3256	.	-	0	ID=cds-WP_001132983.1;Parent=gene-C9F04_RS05500;Dbxref=Genbank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9F04_RS05500;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	3373	4017	.	+	.	ID=gene-C9F04_RS05505;Name=C9F04_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05505;old_locus_tag=C9F04_05680
NZ_PYKF01000220.1	Protein Homology	CDS	3373	4017	.	+	0	ID=cds-WP_000090067.1;Parent=gene-C9F04_RS05505;Dbxref=Genbank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9F04_RS05505;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	4051	5067	.	+	.	ID=gene-C9F04_RS05510;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9F04_RS05510;old_locus_tag=C9F04_05685
NZ_PYKF01000220.1	Protein Homology	CDS	4051	5067	.	+	0	ID=cds-WP_061376692.1;Parent=gene-C9F04_RS05510;Dbxref=Genbank:WP_061376692.1;Name=WP_061376692.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9F04_RS05510;product=lipoate--protein ligase LplA;protein_id=WP_061376692.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	pseudogene	5152	5644	.	-	.	ID=gene-C9F04_RS05515;Name=C9F04_RS05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05515;old_locus_tag=C9F04_05690;pseudo=true
NZ_PYKF01000220.1	Protein Homology	CDS	5152	5644	.	-	0	ID=cds-C9F04_RS05515;Parent=gene-C9F04_RS05515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=C9F04_RS05515;product=transposase;pseudo=true;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	5851	6570	.	-	.	ID=gene-C9F04_RS05520;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9F04_RS05520;old_locus_tag=C9F04_05695
NZ_PYKF01000220.1	Protein Homology	CDS	5851	6570	.	-	0	ID=cds-WP_000224864.1;Parent=gene-C9F04_RS05520;Dbxref=Genbank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9F04_RS05520;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	6780	8003	.	-	.	ID=gene-C9F04_RS05525;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9F04_RS05525;old_locus_tag=C9F04_05700
NZ_PYKF01000220.1	Protein Homology	CDS	6780	8003	.	-	0	ID=cds-WP_000816454.1;Parent=gene-C9F04_RS05525;Dbxref=Genbank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9F04_RS05525;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	8055	9377	.	-	.	ID=gene-C9F04_RS05530;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9F04_RS05530;old_locus_tag=C9F04_05705
NZ_PYKF01000220.1	Protein Homology	CDS	8055	9377	.	-	0	ID=cds-WP_146712392.1;Parent=gene-C9F04_RS05530;Dbxref=Genbank:WP_146712392.1;Name=WP_146712392.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9F04_RS05530;product=thymidine phosphorylase;protein_id=WP_146712392.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	9501	10280	.	-	.	ID=gene-C9F04_RS05535;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9F04_RS05535;old_locus_tag=C9F04_05710
NZ_PYKF01000220.1	Protein Homology	CDS	9501	10280	.	-	0	ID=cds-WP_001519713.1;Parent=gene-C9F04_RS05535;Dbxref=Genbank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9F04_RS05535;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	10540	12090	.	+	.	ID=gene-C9F04_RS05540;Name=C9F04_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05540;old_locus_tag=C9F04_05715
NZ_PYKF01000220.1	Protein Homology	CDS	10540	12090	.	+	0	ID=cds-WP_135369562.1;Parent=gene-C9F04_RS05540;Dbxref=Genbank:WP_135369562.1;Name=WP_135369562.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9F04_RS05540;product=YjjI family glycine radical enzyme;protein_id=WP_135369562.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	12062	12925	.	+	.	ID=gene-C9F04_RS05545;Name=C9F04_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05545;old_locus_tag=C9F04_05720
NZ_PYKF01000220.1	Protein Homology	CDS	12062	12925	.	+	0	ID=cds-WP_001064944.1;Parent=gene-C9F04_RS05545;Dbxref=Genbank:WP_001064944.1;Name=WP_001064944.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9F04_RS05545;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064944.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	12958	13731	.	-	.	ID=gene-C9F04_RS05550;Name=C9F04_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05550;old_locus_tag=C9F04_05725
NZ_PYKF01000220.1	Protein Homology	CDS	12958	13731	.	-	0	ID=cds-WP_135369563.1;Parent=gene-C9F04_RS05550;Dbxref=Genbank:WP_135369563.1;Name=WP_135369563.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9F04_RS05550;product=metal-dependent hydrolase;protein_id=WP_135369563.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	13728	14801	.	-	.	ID=gene-C9F04_RS05555;Name=C9F04_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05555;old_locus_tag=C9F04_05730
NZ_PYKF01000220.1	Protein Homology	CDS	13728	14801	.	-	0	ID=cds-WP_000531540.1;Parent=gene-C9F04_RS05555;Dbxref=Genbank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9F04_RS05555;product=patatin family protein;protein_id=WP_000531540.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	14925	15086	.	-	.	ID=gene-C9F04_RS05560;Name=C9F04_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05560;old_locus_tag=C9F04_05735
NZ_PYKF01000220.1	Protein Homology	CDS	14925	15086	.	-	0	ID=cds-WP_000490276.1;Parent=gene-C9F04_RS05560;Dbxref=Genbank:WP_000490276.1;Name=WP_000490276.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9F04_RS05560;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	15215	15832	.	-	.	ID=gene-C9F04_RS05565;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F04_RS05565;old_locus_tag=C9F04_05740
NZ_PYKF01000220.1	Protein Homology	CDS	15215	15832	.	-	0	ID=cds-WP_000178963.1;Parent=gene-C9F04_RS05565;Dbxref=Genbank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9F04_RS05565;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11
NZ_PYKF01000220.1	RefSeq	gene	16234	17153	.	-	.	ID=gene-C9F04_RS05570;Name=prfC;end_range=17153,.;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9F04_RS05570;old_locus_tag=C9F04_05745;partial=true
NZ_PYKF01000220.1	Protein Homology	CDS	16234	17153	.	-	2	ID=cds-WP_146712393.1;Parent=gene-C9F04_RS05570;Dbxref=Genbank:WP_146712393.1;Name=WP_146712393.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;end_range=17153,.;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9F04_RS05570;partial=true;product=peptide chain release factor 3;protein_id=WP_146712393.1;transl_table=11
##sequence-region NZ_PYKF01000205.1 1 36576
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000205.1	RefSeq	region	1	36576	.	+	.	ID=NZ_PYKF01000205.1:1..36576;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000205.1	RefSeq	gene	9	302	.	-	.	ID=gene-C9F04_RS04875;Name=C9F04_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04875;old_locus_tag=C9F04_05040
NZ_PYKF01000205.1	Protein Homology	CDS	9	302	.	-	0	ID=cds-WP_135420344.1;Parent=gene-C9F04_RS04875;Dbxref=Genbank:WP_135420344.1;Name=WP_135420344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228674.1;locus_tag=C9F04_RS04875;product=YciI family protein;protein_id=WP_135420344.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	445	1365	.	-	.	ID=gene-C9F04_RS04880;Name=C9F04_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04880;old_locus_tag=C9F04_05045
NZ_PYKF01000205.1	Protein Homology	CDS	445	1365	.	-	0	ID=cds-WP_135420347.1;Parent=gene-C9F04_RS04880;Dbxref=Genbank:WP_135420347.1;Name=WP_135420347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149848.1;locus_tag=C9F04_RS04880;product=DMT family transporter;protein_id=WP_135420347.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	1628	2425	.	+	.	ID=gene-C9F04_RS04885;Name=C9F04_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04885;old_locus_tag=C9F04_05050
NZ_PYKF01000205.1	Protein Homology	CDS	1628	2425	.	+	0	ID=cds-WP_135420343.1;Parent=gene-C9F04_RS04885;Dbxref=Genbank:WP_135420343.1;Name=WP_135420343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831133.1;locus_tag=C9F04_RS04885;product=MBL fold metallo-hydrolase;protein_id=WP_135420343.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	2505	3065	.	+	.	ID=gene-C9F04_RS04890;Name=C9F04_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04890;old_locus_tag=C9F04_05055
NZ_PYKF01000205.1	Protein Homology	CDS	2505	3065	.	+	0	ID=cds-WP_135420342.1;Parent=gene-C9F04_RS04890;Dbxref=Genbank:WP_135420342.1;Name=WP_135420342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885073.1;locus_tag=C9F04_RS04890;product=GNAT family N-acetyltransferase;protein_id=WP_135420342.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	3138	3926	.	+	.	ID=gene-C9F04_RS04895;Name=C9F04_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04895;old_locus_tag=C9F04_05060
NZ_PYKF01000205.1	Protein Homology	CDS	3138	3926	.	+	0	ID=cds-WP_135420341.1;Parent=gene-C9F04_RS04895;Dbxref=Genbank:WP_135420341.1;Name=WP_135420341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014414.2;locus_tag=C9F04_RS04895;product=class I SAM-dependent methyltransferase;protein_id=WP_135420341.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	4207	6039	.	-	.	ID=gene-C9F04_RS04900;Name=C9F04_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04900;old_locus_tag=C9F04_05065
NZ_PYKF01000205.1	Protein Homology	CDS	4207	6039	.	-	0	ID=cds-WP_167850431.1;Parent=gene-C9F04_RS04900;Dbxref=Genbank:WP_167850431.1;Name=WP_167850431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=C9F04_RS04900;product=NACHT domain-containing protein;protein_id=WP_167850431.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	pseudogene	6377	6700	.	+	.	ID=gene-C9F04_RS26915;Name=C9F04_RS26915;end_range=6700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26915;partial=true;pseudo=true
NZ_PYKF01000205.1	Protein Homology	CDS	6377	6700	.	+	0	ID=cds-C9F04_RS26915;Parent=gene-C9F04_RS26915;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156408.1;locus_tag=C9F04_RS26915;partial=true;product=integrase;pseudo=true;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	6754	7443	.	-	.	ID=gene-C9F04_RS04910;Name=C9F04_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04910;old_locus_tag=C9F04_05075
NZ_PYKF01000205.1	Protein Homology	CDS	6754	7443	.	-	0	ID=cds-WP_135369032.1;Parent=gene-C9F04_RS04910;Dbxref=Genbank:WP_135369032.1;Name=WP_135369032.1;Ontology_term=GO:0006805,GO:0018784;gbkey=CDS;go_function=(S)-2-haloacid dehalogenase activity|0018784||IEA;go_process=xenobiotic metabolic process|0006805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686258.1;locus_tag=C9F04_RS04910;product=haloacid dehalogenase type II;protein_id=WP_135369032.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	7894	9282	.	+	.	ID=gene-C9F04_RS04915;Name=C9F04_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04915;old_locus_tag=C9F04_05080
NZ_PYKF01000205.1	Protein Homology	CDS	7894	9282	.	+	0	ID=cds-WP_240776468.1;Parent=gene-C9F04_RS04915;Dbxref=Genbank:WP_240776468.1;Name=WP_240776468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=C9F04_RS04915;product=AAA family ATPase;protein_id=WP_240776468.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	9512	10132	.	-	.	ID=gene-C9F04_RS04920;Name=C9F04_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04920;old_locus_tag=C9F04_05085
NZ_PYKF01000205.1	Protein Homology	CDS	9512	10132	.	-	0	ID=cds-WP_135369030.1;Parent=gene-C9F04_RS04920;Dbxref=Genbank:WP_135369030.1;Name=WP_135369030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861012.1;locus_tag=C9F04_RS04920;product=inovirus Gp2 family protein;protein_id=WP_135369030.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	10366	11880	.	-	.	ID=gene-C9F04_RS04925;Name=C9F04_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04925;old_locus_tag=C9F04_05090
NZ_PYKF01000205.1	Protein Homology	CDS	10366	11880	.	-	0	ID=cds-WP_135369055.1;Parent=gene-C9F04_RS04925;Dbxref=Genbank:WP_135369055.1;Name=WP_135369055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923662.1;locus_tag=C9F04_RS04925;product=YfjI family protein;protein_id=WP_135369055.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	12068	12277	.	-	.	ID=gene-C9F04_RS04930;Name=C9F04_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04930;old_locus_tag=C9F04_05095
NZ_PYKF01000205.1	Protein Homology	CDS	12068	12277	.	-	0	ID=cds-WP_135369054.1;Parent=gene-C9F04_RS04930;Dbxref=Genbank:WP_135369054.1;Name=WP_135369054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673480.1;locus_tag=C9F04_RS04930;product=AlpA family phage regulatory protein;protein_id=WP_135369054.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	12392	13255	.	+	.	ID=gene-C9F04_RS04935;Name=C9F04_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04935;old_locus_tag=C9F04_05100
NZ_PYKF01000205.1	GeneMarkS-2+	CDS	12392	13255	.	+	0	ID=cds-WP_135369053.1;Parent=gene-C9F04_RS04935;Dbxref=Genbank:WP_135369053.1;Name=WP_135369053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS04935;product=hypothetical protein;protein_id=WP_135369053.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	13301	14542	.	-	.	ID=gene-C9F04_RS04940;Name=C9F04_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04940;old_locus_tag=C9F04_05105
NZ_PYKF01000205.1	Protein Homology	CDS	13301	14542	.	-	0	ID=cds-WP_135369052.1;Parent=gene-C9F04_RS04940;Dbxref=Genbank:WP_135369052.1;Name=WP_135369052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=C9F04_RS04940;product=integrase;protein_id=WP_135369052.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	14724	15086	.	-	.	ID=gene-C9F04_RS04945;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9F04_RS04945;old_locus_tag=C9F04_05110
NZ_PYKF01000205.1	cmsearch	tmRNA	14724	15086	.	-	.	ID=rna-C9F04_RS04945;Parent=gene-C9F04_RS04945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS04945;product=transfer-messenger RNA
NZ_PYKF01000205.1	cmsearch	exon	14724	15086	.	-	.	ID=exon-C9F04_RS04945-1;Parent=rna-C9F04_RS04945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS04945;product=transfer-messenger RNA
NZ_PYKF01000205.1	RefSeq	gene	15158	16321	.	-	.	ID=gene-C9F04_RS04950;Name=C9F04_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04950;old_locus_tag=C9F04_05115
NZ_PYKF01000205.1	Protein Homology	CDS	15158	16321	.	-	0	ID=cds-WP_012543392.1;Parent=gene-C9F04_RS04950;Dbxref=Genbank:WP_012543392.1;Name=WP_012543392.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9F04_RS04950;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_012543392.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	16329	18509	.	-	.	ID=gene-C9F04_RS04955;Name=C9F04_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04955;old_locus_tag=C9F04_05120
NZ_PYKF01000205.1	Protein Homology	CDS	16329	18509	.	-	0	ID=cds-WP_135369051.1;Parent=gene-C9F04_RS04955;Dbxref=Genbank:WP_135369051.1;Name=WP_135369051.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9F04_RS04955;product=type I secretion system permease/ATPase;protein_id=WP_135369051.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	18506	19915	.	-	.	ID=gene-C9F04_RS04960;Name=C9F04_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04960;old_locus_tag=C9F04_05125
NZ_PYKF01000205.1	Protein Homology	CDS	18506	19915	.	-	0	ID=cds-WP_000533856.1;Parent=gene-C9F04_RS04960;Dbxref=Genbank:WP_000533856.1;Name=WP_000533856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9F04_RS04960;product=TolC family outer membrane protein;protein_id=WP_000533856.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	19980	31454	.	-	.	ID=gene-C9F04_RS04965;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9F04_RS04965;old_locus_tag=C9F04_05130
NZ_PYKF01000205.1	Protein Homology	CDS	19980	31454	.	-	0	ID=cds-WP_146712361.1;Parent=gene-C9F04_RS04965;Dbxref=Genbank:WP_146712361.1;Name=WP_146712361.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9F04_RS04965;product=biofilm-associated protein BapA;protein_id=WP_146712361.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	32070	32552	.	-	.	ID=gene-C9F04_RS04970;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9F04_RS04970;old_locus_tag=C9F04_05135
NZ_PYKF01000205.1	Protein Homology	CDS	32070	32552	.	-	0	ID=cds-WP_001518569.1;Parent=gene-C9F04_RS04970;Dbxref=Genbank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9F04_RS04970;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	32741	33178	.	+	.	ID=gene-C9F04_RS04975;Name=C9F04_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04975;old_locus_tag=C9F04_05140
NZ_PYKF01000205.1	Protein Homology	CDS	32741	33178	.	+	0	ID=cds-WP_222591887.1;Parent=gene-C9F04_RS04975;Dbxref=Genbank:WP_222591887.1;Name=WP_222591887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9F04_RS04975;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_222591887.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	33168	33458	.	+	.	ID=gene-C9F04_RS04980;Name=C9F04_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04980;old_locus_tag=C9F04_05145
NZ_PYKF01000205.1	Protein Homology	CDS	33168	33458	.	+	0	ID=cds-WP_146712363.1;Parent=gene-C9F04_RS04980;Dbxref=Genbank:WP_146712363.1;Name=WP_146712363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9F04_RS04980;product=RnfH family protein;protein_id=WP_146712363.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	33624	33962	.	-	.	ID=gene-C9F04_RS04985;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9F04_RS04985;old_locus_tag=C9F04_05150
NZ_PYKF01000205.1	Protein Homology	CDS	33624	33962	.	-	0	ID=cds-WP_001203445.1;Parent=gene-C9F04_RS04985;Dbxref=Genbank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9F04_RS04985;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	34111	35772	.	-	.	ID=gene-C9F04_RS04990;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9F04_RS04990;old_locus_tag=C9F04_05155
NZ_PYKF01000205.1	Protein Homology	CDS	34111	35772	.	-	0	ID=cds-WP_146712364.1;Parent=gene-C9F04_RS04990;Dbxref=Genbank:WP_146712364.1;Name=WP_146712364.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9F04_RS04990;product=DNA repair protein RecN;protein_id=WP_146712364.1;transl_table=11
NZ_PYKF01000205.1	RefSeq	gene	35858	36576	.	-	.	ID=gene-C9F04_RS04995;Name=nadK;end_range=36576,.;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9F04_RS04995;old_locus_tag=C9F04_05160;partial=true
NZ_PYKF01000205.1	Protein Homology	CDS	35858	36576	.	-	2	ID=cds-WP_146712365.1;Parent=gene-C9F04_RS04995;Dbxref=Genbank:WP_146712365.1;Name=WP_146712365.1;Ontology_term=GO:0003951;end_range=36576,.;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9F04_RS04995;partial=true;product=NAD(+) kinase;protein_id=WP_146712365.1;transl_table=11
##sequence-region NZ_PYKF01000559.1 1 2625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000559.1	RefSeq	region	1	2625	.	+	.	ID=NZ_PYKF01000559.1:1..2625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000559.1	RefSeq	gene	1	2103	.	+	.	ID=gene-C9F04_RS16725;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9F04_RS16725;old_locus_tag=C9F04_17250;partial=true;start_range=.,1
NZ_PYKF01000559.1	Protein Homology	CDS	1	2103	.	+	0	ID=cds-WP_146712905.1;Parent=gene-C9F04_RS16725;Dbxref=Genbank:WP_146712905.1;Name=WP_146712905.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021,GO:0043190;gbkey=CDS;gene=rbbA;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149156.1;locus_tag=C9F04_RS16725;partial=true;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_146712905.1;start_range=.,1;transl_table=11
NZ_PYKF01000559.1	RefSeq	pseudogene	2103	2591	.	+	.	ID=gene-C9F04_RS16730;Name=C9F04_RS16730;end_range=2591,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16730;old_locus_tag=C9F04_17255;partial=true;pseudo=true
NZ_PYKF01000559.1	Protein Homology	CDS	2103	2591	.	+	0	ID=cds-C9F04_RS16730;Parent=gene-C9F04_RS16730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312385.2;locus_tag=C9F04_RS16730;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000671.1 1 2619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000671.1	RefSeq	region	1	2619	.	+	.	ID=NZ_PYKF01000671.1:1..2619;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000671.1	RefSeq	pseudogene	144	2619	.	-	.	ID=gene-C9F04_RS20545;Name=mdtB;end_range=2619,.;gbkey=Gene;gene=mdtB;gene_biotype=pseudogene;locus_tag=C9F04_RS20545;old_locus_tag=C9F04_21215;partial=true;pseudo=true
NZ_PYKF01000671.1	Protein Homology	CDS	144	2619	.	-	1	ID=cds-C9F04_RS20545;Parent=gene-C9F04_RS20545;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=2619,.;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9F04_RS20545;partial=true;product=multidrug efflux RND transporter permease subunit MdtB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000443.1 1 2600
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000443.1	RefSeq	region	1	2600	.	+	.	ID=NZ_PYKF01000443.1:1..2600;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000443.1	RefSeq	gene	1	1107	.	+	.	ID=gene-C9F04_RS13305;Name=C9F04_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13305;old_locus_tag=C9F04_13740;partial=true;start_range=.,1
NZ_PYKF01000443.1	Protein Homology	CDS	1	1107	.	+	0	ID=cds-WP_186799028.1;Parent=gene-C9F04_RS13305;Dbxref=Genbank:WP_186799028.1;Name=WP_186799028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F04_RS13305;partial=true;product=MFS transporter;protein_id=WP_186799028.1;start_range=.,1;transl_table=11
NZ_PYKF01000443.1	RefSeq	gene	1104	1919	.	+	.	ID=gene-C9F04_RS13310;Name=C9F04_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13310;old_locus_tag=C9F04_13745
NZ_PYKF01000443.1	Protein Homology	CDS	1104	1919	.	+	0	ID=cds-WP_079841890.1;Parent=gene-C9F04_RS13310;Dbxref=Genbank:WP_079841890.1;Name=WP_079841890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9F04_RS13310;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_079841890.1;transl_table=11
NZ_PYKF01000443.1	RefSeq	pseudogene	1973	2600	.	-	.	ID=gene-C9F04_RS13315;Name=C9F04_RS13315;end_range=2600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13315;old_locus_tag=C9F04_13750;partial=true;pseudo=true
NZ_PYKF01000443.1	Protein Homology	CDS	1973	2600	.	-	1	ID=cds-C9F04_RS13315;Parent=gene-C9F04_RS13315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9F04_RS13315;partial=true;product=multidrug transporter MdfA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000308.1 1 2599
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000308.1	RefSeq	region	1	2599	.	+	.	ID=NZ_PYKF01000308.1:1..2599;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000308.1	RefSeq	pseudogene	81	560	.	-	.	ID=gene-C9F04_RS09065;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=C9F04_RS09065;old_locus_tag=C9F04_09365;partial=true;pseudo=true;start_range=.,81
NZ_PYKF01000308.1	Protein Homology	CDS	81	560	.	-	0	ID=cds-C9F04_RS09065;Parent=gene-C9F04_RS09065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F04_RS09065;partial=true;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;start_range=.,81;transl_table=11
NZ_PYKF01000308.1	RefSeq	gene	576	2144	.	-	.	ID=gene-C9F04_RS09070;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9F04_RS09070;old_locus_tag=C9F04_09370
NZ_PYKF01000308.1	Protein Homology	CDS	576	2144	.	-	0	ID=cds-WP_000884369.1;Parent=gene-C9F04_RS09070;Dbxref=Genbank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9F04_RS09070;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11
##sequence-region NZ_PYKF01000576.1 1 2598
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000576.1	RefSeq	region	1	2598	.	+	.	ID=NZ_PYKF01000576.1:1..2598;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000576.1	RefSeq	gene	227	2167	.	+	.	ID=gene-C9F04_RS17215;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=C9F04_RS17215;old_locus_tag=C9F04_17775
NZ_PYKF01000576.1	Protein Homology	CDS	227	2167	.	+	0	ID=cds-WP_000849477.1;Parent=gene-C9F04_RS17215;Dbxref=Genbank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=C9F04_RS17215;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11
NZ_PYKF01000576.1	RefSeq	gene	2348	2598	.	+	.	ID=gene-C9F04_RS17220;Name=C9F04_RS17220;end_range=2598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17220;old_locus_tag=C9F04_17780;partial=true
NZ_PYKF01000576.1	Protein Homology	CDS	2348	2598	.	+	0	ID=cds-WP_186799051.1;Parent=gene-C9F04_RS17220;Dbxref=Genbank:WP_186799051.1;Name=WP_186799051.1;Ontology_term=GO:0016491;end_range=2598,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9F04_RS17220;partial=true;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_186799051.1;transl_table=11
##sequence-region NZ_PYKF01000493.1 1 2488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000493.1	RefSeq	region	1	2488	.	+	.	ID=NZ_PYKF01000493.1:1..2488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000493.1	RefSeq	gene	1	260	.	+	.	ID=gene-C9F04_RS14660;Name=C9F04_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14660;old_locus_tag=C9F04_15145;partial=true;start_range=.,1
NZ_PYKF01000493.1	Protein Homology	CDS	1	260	.	+	2	ID=cds-WP_146712804.1;Parent=gene-C9F04_RS14660;Dbxref=Genbank:WP_146712804.1;Name=WP_146712804.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9F04_RS14660;partial=true;product=putative sulfate exporter family transporter;protein_id=WP_146712804.1;start_range=.,1;transl_table=11
NZ_PYKF01000493.1	RefSeq	gene	339	1196	.	+	.	ID=gene-C9F04_RS14665;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9F04_RS14665;old_locus_tag=C9F04_15150
NZ_PYKF01000493.1	Protein Homology	CDS	339	1196	.	+	0	ID=cds-WP_023204025.1;Parent=gene-C9F04_RS14665;Dbxref=Genbank:WP_023204025.1;Name=WP_023204025.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9F04_RS14665;product=deoxyribonuclease IV;protein_id=WP_023204025.1;transl_table=11
NZ_PYKF01000493.1	RefSeq	pseudogene	1261	2469	.	-	.	ID=gene-C9F04_RS14670;Name=fruA;end_range=2469,.;gbkey=Gene;gene=fruA;gene_biotype=pseudogene;locus_tag=C9F04_RS14670;old_locus_tag=C9F04_15155;partial=true;pseudo=true
NZ_PYKF01000493.1	Protein Homology	CDS	1261	2469	.	-	0	ID=cds-C9F04_RS14670;Parent=gene-C9F04_RS14670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982,GO:0022877;end_range=2469,.;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9F04_RS14670;partial=true;product=PTS fructose transporter subunit IIBC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000751.1 1 2551
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000751.1	RefSeq	region	1	2551	.	+	.	ID=NZ_PYKF01000751.1:1..2551;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000751.1	RefSeq	gene	1	421	.	+	.	ID=gene-C9F04_RS23300;Name=C9F04_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23300;old_locus_tag=C9F04_24080;partial=true;start_range=.,1
NZ_PYKF01000751.1	Protein Homology	CDS	1	421	.	+	1	ID=cds-WP_146713249.1;Parent=gene-C9F04_RS23300;Dbxref=Genbank:WP_146713249.1;Name=WP_146713249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F04_RS23300;partial=true;product=YcbK family protein;protein_id=WP_146713249.1;start_range=.,1;transl_table=11
NZ_PYKF01000751.1	RefSeq	gene	449	1096	.	+	.	ID=gene-C9F04_RS23305;Name=C9F04_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23305;old_locus_tag=C9F04_24085
NZ_PYKF01000751.1	Protein Homology	CDS	449	1096	.	+	0	ID=cds-WP_001109471.1;Parent=gene-C9F04_RS23305;Dbxref=Genbank:WP_001109471.1;Name=WP_001109471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9F04_RS23305;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11
NZ_PYKF01000751.1	RefSeq	gene	1158	2348	.	-	.	ID=gene-C9F04_RS23310;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9F04_RS23310;old_locus_tag=C9F04_24090
NZ_PYKF01000751.1	Protein Homology	CDS	1158	2348	.	-	0	ID=cds-WP_000462653.1;Parent=gene-C9F04_RS23310;Dbxref=Genbank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9F04_RS23310;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11
##sequence-region NZ_PYKF01000447.1 1 2549
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000447.1	RefSeq	region	1	2549	.	+	.	ID=NZ_PYKF01000447.1:1..2549;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000447.1	RefSeq	pseudogene	1	695	.	-	.	ID=gene-C9F04_RS13365;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=pseudogene;gene_synonym=manB;locus_tag=C9F04_RS13365;old_locus_tag=C9F04_13800;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000447.1	Protein Homology	CDS	1	695	.	-	0	ID=cds-C9F04_RS13365;Parent=gene-C9F04_RS13365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F04_RS13365;partial=true;product=colanic acid biosynthesis phosphomannomutase CpsG;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000447.1	RefSeq	gene	806	2248	.	-	.	ID=gene-C9F04_RS13370;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9F04_RS13370;old_locus_tag=C9F04_13805
NZ_PYKF01000447.1	Protein Homology	CDS	806	2248	.	-	0	ID=cds-WP_000605946.1;Parent=gene-C9F04_RS13370;Dbxref=Genbank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9F04_RS13370;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11
NZ_PYKF01000447.1	RefSeq	pseudogene	2245	2549	.	-	.	ID=gene-C9F04_RS13375;Name=C9F04_RS13375;end_range=2549,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13375;old_locus_tag=C9F04_13810;partial=true;pseudo=true
NZ_PYKF01000447.1	Protein Homology	CDS	2245	2549	.	-	2	ID=cds-C9F04_RS13375;Parent=gene-C9F04_RS13375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9F04_RS13375;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaI;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000075.1 1 2542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000075.1	RefSeq	region	1	2542	.	+	.	ID=NZ_PYKF01000075.1:1..2542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000075.1	RefSeq	gene	6	962	.	+	.	ID=gene-C9F04_RS01510;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9F04_RS01510;old_locus_tag=C9F04_01580
NZ_PYKF01000075.1	Protein Homology	CDS	6	962	.	+	0	ID=cds-WP_146712195.1;Parent=gene-C9F04_RS01510;Dbxref=Genbank:WP_146712195.1;Name=WP_146712195.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9F04_RS01510;product=GTPase;protein_id=WP_146712195.1;transl_table=11
NZ_PYKF01000075.1	RefSeq	gene	1078	2046	.	-	.	ID=gene-C9F04_RS01515;Name=C9F04_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01515;old_locus_tag=C9F04_01585
NZ_PYKF01000075.1	Protein Homology	CDS	1078	2046	.	-	0	ID=cds-WP_000452022.1;Parent=gene-C9F04_RS01515;Dbxref=Genbank:WP_000452022.1;Name=WP_000452022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9F04_RS01515;product=hypothetical protein;protein_id=WP_000452022.1;transl_table=11
NZ_PYKF01000075.1	RefSeq	gene	2188	2542	.	+	.	ID=gene-C9F04_RS01520;Name=C9F04_RS01520;end_range=2542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01520;old_locus_tag=C9F04_01590;partial=true
NZ_PYKF01000075.1	Protein Homology	CDS	2188	2542	.	+	0	ID=cds-WP_186798977.1;Parent=gene-C9F04_RS01520;Dbxref=Genbank:WP_186798977.1;Name=WP_186798977.1;end_range=2542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9F04_RS01520;partial=true;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=WP_186798977.1;transl_table=11
##sequence-region NZ_PYKF01000781.1 1 2509
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000781.1	RefSeq	region	1	2509	.	+	.	ID=NZ_PYKF01000781.1:1..2509;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000781.1	RefSeq	pseudogene	1	484	.	+	.	ID=gene-C9F04_RS24410;Name=C9F04_RS24410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24410;old_locus_tag=C9F04_25230;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000781.1	Protein Homology	CDS	1	484	.	+	1	ID=cds-C9F04_RS24410;Parent=gene-C9F04_RS24410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092578.1;locus_tag=C9F04_RS24410;partial=true;product=ribonuclease I;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000781.1	RefSeq	gene	719	1129	.	+	.	ID=gene-C9F04_RS24415;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9F04_RS24415;old_locus_tag=C9F04_25240
NZ_PYKF01000781.1	Protein Homology	CDS	719	1129	.	+	0	ID=cds-WP_146713295.1;Parent=gene-C9F04_RS24415;Dbxref=Genbank:WP_146713295.1;Name=WP_146713295.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9F04_RS24415;product=nucleoside diphosphate kinase regulator;protein_id=WP_146713295.1;transl_table=11
NZ_PYKF01000781.1	RefSeq	gene	1212	2450	.	-	.	ID=gene-C9F04_RS24420;Name=C9F04_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24420;old_locus_tag=C9F04_25245
NZ_PYKF01000781.1	Protein Homology	CDS	1212	2450	.	-	0	ID=cds-WP_146713296.1;Parent=gene-C9F04_RS24420;Dbxref=Genbank:WP_146713296.1;Name=WP_146713296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9F04_RS24420;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_146713296.1;transl_table=11
##sequence-region NZ_PYKF01000604.1 1 17108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000604.1	RefSeq	region	1	17108	.	+	.	ID=NZ_PYKF01000604.1:1..17108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000604.1	RefSeq	pseudogene	45	812	.	-	.	ID=gene-C9F04_RS18065;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=C9F04_RS18065;old_locus_tag=C9F04_18645;partial=true;pseudo=true;start_range=.,45
NZ_PYKF01000604.1	Protein Homology	CDS	45	812	.	-	0	ID=cds-C9F04_RS18065;Parent=gene-C9F04_RS18065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9F04_RS18065;partial=true;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;start_range=.,45;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	901	2052	.	+	.	ID=gene-C9F04_RS18070;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9F04_RS18070;old_locus_tag=C9F04_18650
NZ_PYKF01000604.1	Protein Homology	CDS	901	2052	.	+	0	ID=cds-WP_000800208.1;Parent=gene-C9F04_RS18070;Dbxref=Genbank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9F04_RS18070;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	2421	5072	.	+	.	ID=gene-C9F04_RS18075;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9F04_RS18075;old_locus_tag=C9F04_18660
NZ_PYKF01000604.1	Protein Homology	CDS	2421	5072	.	+	0	ID=cds-WP_146712978.1;Parent=gene-C9F04_RS18075;Dbxref=Genbank:WP_146712978.1;Name=WP_146712978.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9F04_RS18075;product=phosphoenolpyruvate carboxylase;protein_id=WP_146712978.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	5283	7016	.	+	.	ID=gene-C9F04_RS18080;Name=C9F04_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18080;old_locus_tag=C9F04_18665
NZ_PYKF01000604.1	Protein Homology	CDS	5283	7016	.	+	0	ID=cds-WP_058145360.1;Parent=gene-C9F04_RS18080;Dbxref=Genbank:WP_058145360.1;Name=WP_058145360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9F04_RS18080;product=phosphoethanolamine transferase CptA;protein_id=WP_058145360.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	7177	8028	.	+	.	ID=gene-C9F04_RS18085;Name=C9F04_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18085;old_locus_tag=C9F04_18670
NZ_PYKF01000604.1	Protein Homology	CDS	7177	8028	.	+	0	ID=cds-WP_000274596.1;Parent=gene-C9F04_RS18085;Dbxref=Genbank:WP_000274596.1;Name=WP_000274596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=C9F04_RS18085;product=AraC family transcriptional regulator;protein_id=WP_000274596.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	8015	8368	.	-	.	ID=gene-C9F04_RS18090;Name=C9F04_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18090;old_locus_tag=C9F04_18675
NZ_PYKF01000604.1	Protein Homology	CDS	8015	8368	.	-	0	ID=cds-WP_000290522.1;Parent=gene-C9F04_RS18090;Dbxref=Genbank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=C9F04_RS18090;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	8370	9248	.	-	.	ID=gene-C9F04_RS18095;Name=C9F04_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18095;old_locus_tag=C9F04_18680
NZ_PYKF01000604.1	Protein Homology	CDS	8370	9248	.	-	0	ID=cds-WP_000171724.1;Parent=gene-C9F04_RS18095;Dbxref=Genbank:WP_000171724.1;Name=WP_000171724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9F04_RS18095;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000171724.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	9214	11511	.	-	.	ID=gene-C9F04_RS18100;Name=C9F04_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18100;old_locus_tag=C9F04_18685
NZ_PYKF01000604.1	Protein Homology	CDS	9214	11511	.	-	0	ID=cds-WP_000149714.1;Parent=gene-C9F04_RS18100;Dbxref=Genbank:WP_000149714.1;Name=WP_000149714.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=C9F04_RS18100;product=formate C-acetyltransferase;protein_id=WP_000149714.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	11610	11930	.	-	.	ID=gene-C9F04_RS18105;Name=C9F04_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18105;old_locus_tag=C9F04_18690
NZ_PYKF01000604.1	Protein Homology	CDS	11610	11930	.	-	0	ID=cds-WP_000161258.1;Parent=gene-C9F04_RS18105;Dbxref=Genbank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=C9F04_RS18105;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	11945	13024	.	-	.	ID=gene-C9F04_RS18110;Name=C9F04_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18110;old_locus_tag=C9F04_18695
NZ_PYKF01000604.1	Protein Homology	CDS	11945	13024	.	-	0	ID=cds-WP_000661597.1;Parent=gene-C9F04_RS18110;Dbxref=Genbank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9F04_RS18110;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	13334	15835	.	+	.	ID=gene-C9F04_RS18115;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F04_RS18115;old_locus_tag=C9F04_18700
NZ_PYKF01000604.1	Protein Homology	CDS	13334	15835	.	+	0	ID=cds-WP_135369094.1;Parent=gene-C9F04_RS18115;Dbxref=Genbank:WP_135369094.1;Name=WP_135369094.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=C9F04_RS18115;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_135369094.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	15846	16508	.	+	.	ID=gene-C9F04_RS18120;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9F04_RS18120;old_locus_tag=C9F04_18705
NZ_PYKF01000604.1	Protein Homology	CDS	15846	16508	.	+	0	ID=cds-WP_146712979.1;Parent=gene-C9F04_RS18120;Dbxref=Genbank:WP_146712979.1;Name=WP_146712979.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9F04_RS18120;product=fructose-6-phosphate aldolase;protein_id=WP_146712979.1;transl_table=11
NZ_PYKF01000604.1	RefSeq	gene	16520	17108	.	+	.	ID=gene-C9F04_RS18125;Name=C9F04_RS18125;end_range=17108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18125;old_locus_tag=C9F04_18710;partial=true
NZ_PYKF01000604.1	Protein Homology	CDS	16520	17108	.	+	0	ID=cds-WP_146712980.1;Parent=gene-C9F04_RS18125;Dbxref=Genbank:WP_146712980.1;Name=WP_146712980.1;Ontology_term=GO:0016491,GO:0046872;end_range=17108,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9F04_RS18125;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_146712980.1;transl_table=11
##sequence-region NZ_PYKF01000611.1 1 2502
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000611.1	RefSeq	region	1	2502	.	+	.	ID=NZ_PYKF01000611.1:1..2502;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000611.1	RefSeq	gene	1	658	.	+	.	ID=gene-C9F04_RS18395;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9F04_RS18395;old_locus_tag=C9F04_18995;partial=true;start_range=.,1
NZ_PYKF01000611.1	Protein Homology	CDS	1	658	.	+	1	ID=cds-WP_146712992.1;Parent=gene-C9F04_RS18395;Dbxref=Genbank:WP_146712992.1;Name=WP_146712992.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F04_RS18395;partial=true;product=murein DD-endopeptidase MepM;protein_id=WP_146712992.1;start_range=.,1;transl_table=11
NZ_PYKF01000611.1	RefSeq	gene	775	1746	.	+	.	ID=gene-C9F04_RS18400;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9F04_RS18400;old_locus_tag=C9F04_19005
NZ_PYKF01000611.1	Protein Homology	CDS	775	1746	.	+	0	ID=cds-WP_000448401.1;Parent=gene-C9F04_RS18400;Dbxref=Genbank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9F04_RS18400;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11
NZ_PYKF01000611.1	RefSeq	gene	1819	2502	.	-	.	ID=gene-C9F04_RS18405;Name=C9F04_RS18405;end_range=2502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18405;old_locus_tag=C9F04_19010;partial=true
NZ_PYKF01000611.1	Protein Homology	CDS	1819	2502	.	-	0	ID=cds-WP_261771361.1;Parent=gene-C9F04_RS18405;Dbxref=Genbank:WP_261771361.1;Name=WP_261771361.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;end_range=2502,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9F04_RS18405;partial=true;product=pyruvate kinase;protein_id=WP_261771361.1;transl_table=11
##sequence-region NZ_PYKF01000128.1 1 2500
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000128.1	RefSeq	region	1	2500	.	+	.	ID=NZ_PYKF01000128.1:1..2500;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000128.1	RefSeq	gene	1	730	.	-	.	ID=gene-C9F04_RS02455;Name=C9F04_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02455;old_locus_tag=C9F04_02535;partial=true;start_range=.,1
NZ_PYKF01000128.1	Protein Homology	CDS	1	730	.	-	0	ID=cds-WP_146712237.1;Parent=gene-C9F04_RS02455;Dbxref=Genbank:WP_146712237.1;Name=WP_146712237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F04_RS02455;partial=true;product=glucose-6-phosphate dehydrogenase (NADP(+));protein_id=WP_146712237.1;start_range=.,1;transl_table=11
NZ_PYKF01000128.1	RefSeq	gene	1072	1941	.	+	.	ID=gene-C9F04_RS02460;Name=C9F04_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02460;old_locus_tag=C9F04_02545
NZ_PYKF01000128.1	Protein Homology	CDS	1072	1941	.	+	0	ID=cds-WP_146712238.1;Parent=gene-C9F04_RS02460;Dbxref=Genbank:WP_146712238.1;Name=WP_146712238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9F04_RS02460;product=MurR/RpiR family transcriptional regulator;protein_id=WP_146712238.1;transl_table=11
NZ_PYKF01000128.1	RefSeq	gene	2065	2500	.	+	.	ID=gene-C9F04_RS02465;Name=C9F04_RS02465;end_range=2500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02465;old_locus_tag=C9F04_02550;partial=true
NZ_PYKF01000128.1	Protein Homology	CDS	2065	2500	.	+	0	ID=cds-WP_146712239.1;Parent=gene-C9F04_RS02465;Dbxref=Genbank:WP_146712239.1;Name=WP_146712239.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;end_range=2500,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9F04_RS02465;partial=true;product=pyruvate kinase;protein_id=WP_146712239.1;transl_table=11
##sequence-region NZ_PYKF01000171.1 1 2500
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000171.1	RefSeq	region	1	2500	.	+	.	ID=NZ_PYKF01000171.1:1..2500;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000171.1	RefSeq	gene	1	983	.	+	.	ID=gene-C9F04_RS03630;Name=C9F04_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03630;old_locus_tag=C9F04_03750;partial=true;start_range=.,1
NZ_PYKF01000171.1	Protein Homology	CDS	1	983	.	+	2	ID=cds-WP_261770742.1;Parent=gene-C9F04_RS03630;Dbxref=Genbank:WP_261770742.1;Name=WP_261770742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=C9F04_RS03630;partial=true;product=MFS transporter;protein_id=WP_261770742.1;start_range=.,1;transl_table=11
NZ_PYKF01000171.1	RefSeq	gene	1031	1912	.	-	.	ID=gene-C9F04_RS03635;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9F04_RS03635;old_locus_tag=C9F04_03755
NZ_PYKF01000171.1	Protein Homology	CDS	1031	1912	.	-	0	ID=cds-WP_000984498.1;Parent=gene-C9F04_RS03635;Dbxref=Genbank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9F04_RS03635;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11
NZ_PYKF01000171.1	RefSeq	gene	2106	2500	.	-	.	ID=gene-C9F04_RS03640;Name=C9F04_RS03640;end_range=2500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03640;old_locus_tag=C9F04_03760;partial=true
NZ_PYKF01000171.1	Protein Homology	CDS	2106	2500	.	-	2	ID=cds-WP_186798992.1;Parent=gene-C9F04_RS03640;Dbxref=Genbank:WP_186798992.1;Name=WP_186798992.1;end_range=2500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9F04_RS03640;partial=true;product=carboxy terminal-processing peptidase;protein_id=WP_186798992.1;transl_table=11
##sequence-region NZ_PYKF01000352.1 1 2481
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000352.1	RefSeq	region	1	2481	.	+	.	ID=NZ_PYKF01000352.1:1..2481;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000352.1	RefSeq	gene	1	218	.	+	.	ID=gene-C9F04_RS10405;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9F04_RS10405;old_locus_tag=C9F04_10735;partial=true;start_range=.,1
NZ_PYKF01000352.1	Protein Homology	CDS	1	218	.	+	2	ID=cds-WP_146712598.1;Parent=gene-C9F04_RS10405;Dbxref=Genbank:WP_146712598.1;Name=WP_146712598.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9F04_RS10405;partial=true;product=DUF1471 family periplasmic protein YahO;protein_id=WP_146712598.1;start_range=.,1;transl_table=11
NZ_PYKF01000352.1	RefSeq	gene	354	1979	.	-	.	ID=gene-C9F04_RS10410;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9F04_RS10410;old_locus_tag=C9F04_10740
NZ_PYKF01000352.1	Protein Homology	CDS	354	1979	.	-	0	ID=cds-WP_146712599.1;Parent=gene-C9F04_RS10410;Dbxref=Genbank:WP_146712599.1;Name=WP_146712599.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9F04_RS10410;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_146712599.1;transl_table=11
NZ_PYKF01000352.1	RefSeq	pseudogene	2245	2481	.	+	.	ID=gene-C9F04_RS10415;Name=prpB;end_range=2481,.;gbkey=Gene;gene=prpB;gene_biotype=pseudogene;locus_tag=C9F04_RS10415;old_locus_tag=C9F04_10745;partial=true;pseudo=true
NZ_PYKF01000352.1	Protein Homology	CDS	2245	2481	.	+	0	ID=cds-C9F04_RS10415;Parent=gene-C9F04_RS10415;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2481,.;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021316.1;locus_tag=C9F04_RS10415;partial=true;product=methylisocitrate lyase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000079.1 1 2475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000079.1	RefSeq	region	1	2475	.	+	.	ID=NZ_PYKF01000079.1:1..2475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000079.1	RefSeq	gene	1	771	.	-	.	ID=gene-C9F04_RS01590;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9F04_RS01590;old_locus_tag=C9F04_01660;partial=true;start_range=.,1
NZ_PYKF01000079.1	Protein Homology	CDS	1	771	.	-	0	ID=cds-WP_146712198.1;Parent=gene-C9F04_RS01590;Dbxref=Genbank:WP_146712198.1;Name=WP_146712198.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371340.1;locus_tag=C9F04_RS01590;partial=true;product=glutamate 5-kinase;protein_id=WP_146712198.1;start_range=.,1;transl_table=11
NZ_PYKF01000079.1	RefSeq	gene	1054	2106	.	+	.	ID=gene-C9F04_RS01595;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9F04_RS01595;old_locus_tag=C9F04_01665
NZ_PYKF01000079.1	Protein Homology	CDS	1054	2106	.	+	0	ID=cds-WP_001043662.1;Parent=gene-C9F04_RS01595;Dbxref=Genbank:WP_001043662.1;Name=WP_001043662.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9F04_RS01595;product=phosphoporin PhoE;protein_id=WP_001043662.1;transl_table=11
NZ_PYKF01000079.1	RefSeq	gene	2157	2475	.	-	.	ID=gene-C9F04_RS01600;Name=crl;end_range=2475,.;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9F04_RS01600;old_locus_tag=C9F04_01670;partial=true
NZ_PYKF01000079.1	Protein Homology	CDS	2157	2475	.	-	1	ID=cds-WP_186798979.1;Parent=gene-C9F04_RS01600;Dbxref=Genbank:WP_186798979.1;Name=WP_186798979.1;Ontology_term=GO:0045893;end_range=2475,.;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174676.1;locus_tag=C9F04_RS01600;partial=true;product=sigma factor-binding protein Crl;protein_id=WP_186798979.1;transl_table=11
##sequence-region NZ_PYKF01000347.1 1 2448
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000347.1	RefSeq	region	1	2448	.	+	.	ID=NZ_PYKF01000347.1:1..2448;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000347.1	RefSeq	gene	1	1594	.	-	.	ID=gene-C9F04_RS10230;Name=C9F04_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10230;old_locus_tag=C9F04_10555;partial=true;start_range=.,1
NZ_PYKF01000347.1	Protein Homology	CDS	1	1594	.	-	0	ID=cds-WP_146712593.1;Parent=gene-C9F04_RS10230;Dbxref=Genbank:WP_146712593.1;Name=WP_146712593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F04_RS10230;partial=true;product=alpha%2Calpha-trehalase;protein_id=WP_146712593.1;start_range=.,1;transl_table=11
NZ_PYKF01000347.1	RefSeq	gene	1808	2448	.	-	.	ID=gene-C9F04_RS10235;Name=C9F04_RS10235;end_range=2448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10235;old_locus_tag=C9F04_10560;partial=true
NZ_PYKF01000347.1	Protein Homology	CDS	1808	2448	.	-	2	ID=cds-WP_261770802.1;Parent=gene-C9F04_RS10235;Dbxref=Genbank:WP_261770802.1;Name=WP_261770802.1;end_range=2448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9F04_RS10235;partial=true;product=glutamate dehydrogenase;protein_id=WP_261770802.1;transl_table=11
##sequence-region NZ_PYKF01000191.1 1 2443
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000191.1	RefSeq	region	1	2443	.	+	.	ID=NZ_PYKF01000191.1:1..2443;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000191.1	RefSeq	gene	1	2198	.	-	.	ID=gene-C9F04_RS04435;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9F04_RS04435;old_locus_tag=C9F04_04575;partial=true;start_range=.,1
NZ_PYKF01000191.1	Protein Homology	CDS	1	2198	.	-	0	ID=cds-WP_146712335.1;Parent=gene-C9F04_RS04435;Dbxref=Genbank:WP_146712335.1;Name=WP_146712335.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9F04_RS04435;partial=true;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_146712335.1;start_range=.,1;transl_table=11
NZ_PYKF01000191.1	RefSeq	gene	2214	2443	.	-	.	ID=gene-C9F04_RS04440;Name=C9F04_RS04440;end_range=2443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04440;old_locus_tag=C9F04_04580;partial=true
NZ_PYKF01000191.1	Protein Homology	CDS	2214	2443	.	-	2	ID=cds-WP_146712336.1;Parent=gene-C9F04_RS04440;Dbxref=Genbank:WP_146712336.1;Name=WP_146712336.1;end_range=2443,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9F04_RS04440;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_146712336.1;transl_table=11
##sequence-region NZ_PYKF01000710.1 1 2438
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000710.1	RefSeq	region	1	2438	.	+	.	ID=NZ_PYKF01000710.1:1..2438;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000710.1	RefSeq	pseudogene	43	348	.	-	.	ID=gene-C9F04_RS22055;Name=C9F04_RS22055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22055;old_locus_tag=C9F04_22790;partial=true;pseudo=true;start_range=.,43
NZ_PYKF01000710.1	Protein Homology	CDS	43	348	.	-	0	ID=cds-C9F04_RS22055;Parent=gene-C9F04_RS22055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313333.1;locus_tag=C9F04_RS22055;partial=true;product=restriction endonuclease subunit S;pseudo=true;start_range=.,43;transl_table=11
NZ_PYKF01000710.1	RefSeq	gene	348	1817	.	-	.	ID=gene-C9F04_RS22060;Name=C9F04_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22060;old_locus_tag=C9F04_22795
NZ_PYKF01000710.1	Protein Homology	CDS	348	1817	.	-	0	ID=cds-WP_146713179.1;Parent=gene-C9F04_RS22060;Dbxref=Genbank:WP_146713179.1;Name=WP_146713179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=C9F04_RS22060;product=type I restriction-modification system subunit M;protein_id=WP_146713179.1;transl_table=11
NZ_PYKF01000710.1	RefSeq	pseudogene	1888	2438	.	-	.	ID=gene-C9F04_RS22065;Name=C9F04_RS22065;end_range=2438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22065;old_locus_tag=C9F04_22800;partial=true;pseudo=true
NZ_PYKF01000710.1	Protein Homology	CDS	1888	2438	.	-	2	ID=cds-C9F04_RS22065;Parent=gene-C9F04_RS22065;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9F04_RS22065;partial=true;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000718.1 1 2409
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000718.1	RefSeq	region	1	2409	.	+	.	ID=NZ_PYKF01000718.1:1..2409;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000718.1	RefSeq	gene	1	555	.	+	.	ID=gene-C9F04_RS22335;Name=C9F04_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22335;old_locus_tag=C9F04_23075;partial=true;start_range=.,1
NZ_PYKF01000718.1	Protein Homology	CDS	1	555	.	+	0	ID=cds-WP_261771464.1;Parent=gene-C9F04_RS22335;Dbxref=Genbank:WP_261771464.1;Name=WP_261771464.1;Ontology_term=GO:0016765,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9F04_RS22335;partial=true;product=UbiA family prenyltransferase;protein_id=WP_261771464.1;start_range=.,1;transl_table=11
NZ_PYKF01000718.1	RefSeq	pseudogene	654	2409	.	-	.	ID=gene-C9F04_RS22340;Name=plsB;end_range=2409,.;gbkey=Gene;gene=plsB;gene_biotype=pseudogene;locus_tag=C9F04_RS22340;old_locus_tag=C9F04_23080;partial=true;pseudo=true
NZ_PYKF01000718.1	Protein Homology	CDS	654	2409	.	-	1	ID=cds-C9F04_RS22340;Parent=gene-C9F04_RS22340;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0008654,GO:0004366;end_range=2409,.;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9F04_RS22340;partial=true;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000343.1 1 2407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000343.1	RefSeq	region	1	2407	.	+	.	ID=NZ_PYKF01000343.1:1..2407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000343.1	RefSeq	pseudogene	1	224	.	+	.	ID=gene-C9F04_RS10080;Name=C9F04_RS10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10080;old_locus_tag=C9F04_10400;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000343.1	Protein Homology	CDS	1	224	.	+	2	ID=cds-C9F04_RS10080;Parent=gene-C9F04_RS10080;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9F04_RS10080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000343.1	RefSeq	gene	243	2407	.	+	.	ID=gene-C9F04_RS10085;Name=mscM;end_range=2407,.;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9F04_RS10085;old_locus_tag=C9F04_10405;partial=true
NZ_PYKF01000343.1	Protein Homology	CDS	243	2407	.	+	0	ID=cds-WP_146712584.1;Parent=gene-C9F04_RS10085;Dbxref=Genbank:WP_146712584.1;Name=WP_146712584.1;Ontology_term=GO:0055085,GO:0016020;end_range=2407,.;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427743.1;locus_tag=C9F04_RS10085;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=WP_146712584.1;transl_table=11
##sequence-region NZ_PYKF01000746.1 1 17036
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000746.1	RefSeq	region	1	17036	.	+	.	ID=NZ_PYKF01000746.1:1..17036;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000746.1	RefSeq	gene	1	734	.	-	.	ID=gene-C9F04_RS23100;Name=C9F04_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23100;old_locus_tag=C9F04_23870;partial=true;start_range=.,1
NZ_PYKF01000746.1	Protein Homology	CDS	1	734	.	-	0	ID=cds-WP_186799085.1;Parent=gene-C9F04_RS23100;Dbxref=Genbank:WP_186799085.1;Name=WP_186799085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9F04_RS23100;partial=true;product=chorismate-binding protein;protein_id=WP_186799085.1;start_range=.,1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	1042	1998	.	+	.	ID=gene-C9F04_RS23105;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9F04_RS23105;old_locus_tag=C9F04_23875
NZ_PYKF01000746.1	Protein Homology	CDS	1042	1998	.	+	0	ID=cds-WP_146713239.1;Parent=gene-C9F04_RS23105;Dbxref=Genbank:WP_146713239.1;Name=WP_146713239.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9F04_RS23105;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_146713239.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	pseudogene	2061	2498	.	-	.	ID=gene-C9F04_RS23110;Name=C9F04_RS23110;end_range=2498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23110;old_locus_tag=C9F04_23880;partial=true;pseudo=true
NZ_PYKF01000746.1	Protein Homology	CDS	2061	2498	.	-	0	ID=cds-C9F04_RS23110;Parent=gene-C9F04_RS23110;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9F04_RS23110;partial=true;product=MFS transporter;pseudo=true;transl_table=11
NZ_PYKF01000746.1	RefSeq	pseudogene	2514	2759	.	-	.	ID=gene-C9F04_RS23115;Name=C9F04_RS23115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23115;old_locus_tag=C9F04_23885;partial=true;pseudo=true;start_range=.,2514
NZ_PYKF01000746.1	Protein Homology	CDS	2514	2759	.	-	0	ID=cds-C9F04_RS23115;Parent=gene-C9F04_RS23115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F04_RS23115;partial=true;product=permease;pseudo=true;start_range=.,2514;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	2770	3051	.	-	.	ID=gene-C9F04_RS23120;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9F04_RS23120;old_locus_tag=C9F04_23890
NZ_PYKF01000746.1	Protein Homology	CDS	2770	3051	.	-	0	ID=cds-WP_000976132.1;Parent=gene-C9F04_RS23120;Dbxref=Genbank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9F04_RS23120;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	3048	4166	.	-	.	ID=gene-C9F04_RS23125;Name=C9F04_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23125;old_locus_tag=C9F04_23895
NZ_PYKF01000746.1	Protein Homology	CDS	3048	4166	.	-	0	ID=cds-WP_000144629.1;Parent=gene-C9F04_RS23125;Dbxref=Genbank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9F04_RS23125;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	4383	4922	.	+	.	ID=gene-C9F04_RS23130;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9F04_RS23130;old_locus_tag=C9F04_23900
NZ_PYKF01000746.1	Protein Homology	CDS	4383	4922	.	+	0	ID=cds-WP_000229311.1;Parent=gene-C9F04_RS23130;Dbxref=Genbank:WP_000229311.1;Name=WP_000229311.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9F04_RS23130;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229311.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	4919	5899	.	-	.	ID=gene-C9F04_RS23135;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9F04_RS23135;old_locus_tag=C9F04_23905
NZ_PYKF01000746.1	Protein Homology	CDS	4919	5899	.	-	0	ID=cds-WP_079840361.1;Parent=gene-C9F04_RS23135;Dbxref=Genbank:WP_079840361.1;Name=WP_079840361.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9F04_RS23135;product=YdcK family protein;protein_id=WP_079840361.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	6006	7019	.	+	.	ID=gene-C9F04_RS23140;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9F04_RS23140;old_locus_tag=C9F04_23910
NZ_PYKF01000746.1	Protein Homology	CDS	6006	7019	.	+	0	ID=cds-WP_146713240.1;Parent=gene-C9F04_RS23140;Dbxref=Genbank:WP_146713240.1;Name=WP_146713240.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;gene=tehA;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9F04_RS23140;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_146713240.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	7006	7602	.	+	.	ID=gene-C9F04_RS23145;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9F04_RS23145;old_locus_tag=C9F04_23915
NZ_PYKF01000746.1	Protein Homology	CDS	7006	7602	.	+	0	ID=cds-WP_000218276.1;Parent=gene-C9F04_RS23145;Dbxref=Genbank:WP_000218276.1;Name=WP_000218276.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9F04_RS23145;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218276.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	pseudogene	7758	8426	.	+	.	ID=gene-C9F04_RS23150;Name=C9F04_RS23150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23150;old_locus_tag=C9F04_23920;pseudo=true
NZ_PYKF01000746.1	Protein Homology	CDS	7758	8426	.	+	0	ID=cds-C9F04_RS23150;Parent=gene-C9F04_RS23150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9F04_RS23150;product=DUF3313 domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	8480	9658	.	-	.	ID=gene-C9F04_RS23155;Name=C9F04_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23155;old_locus_tag=C9F04_23925
NZ_PYKF01000746.1	Protein Homology	CDS	8480	9658	.	-	0	ID=cds-WP_146713241.1;Parent=gene-C9F04_RS23155;Dbxref=Genbank:WP_146713241.1;Name=WP_146713241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9F04_RS23155;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_146713241.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	9751	10287	.	+	.	ID=gene-C9F04_RS23160;Name=C9F04_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23160;old_locus_tag=C9F04_23930
NZ_PYKF01000746.1	Protein Homology	CDS	9751	10287	.	+	0	ID=cds-WP_135369486.1;Parent=gene-C9F04_RS23160;Dbxref=Genbank:WP_135369486.1;Name=WP_135369486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9F04_RS23160;product=XRE family transcriptional regulator;protein_id=WP_135369486.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	10366	12330	.	+	.	ID=gene-C9F04_RS23165;Name=C9F04_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23165;old_locus_tag=C9F04_23935
NZ_PYKF01000746.1	Protein Homology	CDS	10366	12330	.	+	0	ID=cds-WP_146713242.1;Parent=gene-C9F04_RS23165;Dbxref=Genbank:WP_146713242.1;Name=WP_146713242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9F04_RS23165;product=U32 family peptidase;protein_id=WP_146713242.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	12331	12561	.	-	.	ID=gene-C9F04_RS23170;Name=C9F04_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23170;old_locus_tag=C9F04_23940
NZ_PYKF01000746.1	Protein Homology	CDS	12331	12561	.	-	0	ID=cds-WP_000956438.1;Parent=gene-C9F04_RS23170;Dbxref=Genbank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9F04_RS23170;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	12834	13784	.	-	.	ID=gene-C9F04_RS23175;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9F04_RS23175;old_locus_tag=C9F04_23945
NZ_PYKF01000746.1	Protein Homology	CDS	12834	13784	.	-	0	ID=cds-WP_135369778.1;Parent=gene-C9F04_RS23175;Dbxref=Genbank:WP_135369778.1;Name=WP_135369778.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9F04_RS23175;product=SPI-2 type III secretion system effector SifB;protein_id=WP_135369778.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	14299	14697	.	+	.	ID=gene-C9F04_RS23180;Name=C9F04_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23180;old_locus_tag=C9F04_23950
NZ_PYKF01000746.1	Protein Homology	CDS	14299	14697	.	+	0	ID=cds-WP_023227527.1;Parent=gene-C9F04_RS23180;Dbxref=Genbank:WP_023227527.1;Name=WP_023227527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9F04_RS23180;product=hypothetical protein;protein_id=WP_023227527.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	14730	14960	.	+	.	ID=gene-C9F04_RS23185;Name=C9F04_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23185;old_locus_tag=C9F04_23955
NZ_PYKF01000746.1	Protein Homology	CDS	14730	14960	.	+	0	ID=cds-WP_135369594.1;Parent=gene-C9F04_RS23185;Dbxref=Genbank:WP_135369594.1;Name=WP_135369594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9F04_RS23185;product=hypothetical protein;protein_id=WP_135369594.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	gene	15220	15990	.	+	.	ID=gene-C9F04_RS23190;Name=C9F04_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23190;old_locus_tag=C9F04_23960
NZ_PYKF01000746.1	Protein Homology	CDS	15220	15990	.	+	0	ID=cds-WP_135369595.1;Parent=gene-C9F04_RS23190;Dbxref=Genbank:WP_135369595.1;Name=WP_135369595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9F04_RS23190;product=M15 family metallopeptidase;protein_id=WP_135369595.1;transl_table=11
NZ_PYKF01000746.1	RefSeq	pseudogene	16126	17036	.	+	.	ID=gene-C9F04_RS23195;Name=ycdR;end_range=17036,.;gbkey=Gene;gene=ycdR;gene_biotype=pseudogene;locus_tag=C9F04_RS23195;old_locus_tag=C9F04_23965;partial=true;pseudo=true
NZ_PYKF01000746.1	Protein Homology	CDS	16126	17036	.	+	0	ID=cds-C9F04_RS23195;Parent=gene-C9F04_RS23195;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17036,.;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9F04_RS23195;partial=true;product=GntR family transcriptional regulator YdcR;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000290.1 1 2396
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000290.1	RefSeq	region	1	2396	.	+	.	ID=NZ_PYKF01000290.1:1..2396;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000290.1	RefSeq	gene	591	1466	.	+	.	ID=gene-C9F04_RS08455;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9F04_RS08455;old_locus_tag=C9F04_08730
NZ_PYKF01000290.1	Protein Homology	CDS	591	1466	.	+	0	ID=cds-WP_001587007.1;Parent=gene-C9F04_RS08455;Dbxref=Genbank:WP_001587007.1;Name=WP_001587007.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9F04_RS08455;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001587007.1;transl_table=11
NZ_PYKF01000290.1	RefSeq	gene	1689	2369	.	+	.	ID=gene-C9F04_RS08460;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9F04_RS08460;old_locus_tag=C9F04_08735
NZ_PYKF01000290.1	Protein Homology	CDS	1689	2369	.	+	0	ID=cds-WP_146712501.1;Parent=gene-C9F04_RS08460;Dbxref=Genbank:WP_146712501.1;Name=WP_146712501.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9F04_RS08460;product=type III secretion system effector protease PipA;protein_id=WP_146712501.1;transl_table=11
##sequence-region NZ_PYKF01000699.1 1 2389
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000699.1	RefSeq	region	1	2389	.	+	.	ID=NZ_PYKF01000699.1:1..2389;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000699.1	RefSeq	gene	1	468	.	-	.	ID=gene-C9F04_RS21740;Name=C9F04_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21740;old_locus_tag=C9F04_22470;partial=true;start_range=.,1
NZ_PYKF01000699.1	Protein Homology	CDS	1	468	.	-	0	ID=cds-WP_146713159.1;Parent=gene-C9F04_RS21740;Dbxref=Genbank:WP_146713159.1;Name=WP_146713159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=C9F04_RS21740;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_146713159.1;start_range=.,1;transl_table=11
NZ_PYKF01000699.1	RefSeq	gene	465	689	.	-	.	ID=gene-C9F04_RS21745;Name=C9F04_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21745;old_locus_tag=C9F04_22475
NZ_PYKF01000699.1	Protein Homology	CDS	465	689	.	-	0	ID=cds-WP_000620702.1;Parent=gene-C9F04_RS21745;Dbxref=Genbank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=C9F04_RS21745;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11
NZ_PYKF01000699.1	RefSeq	gene	686	1627	.	-	.	ID=gene-C9F04_RS21750;Name=C9F04_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21750;old_locus_tag=C9F04_22480
NZ_PYKF01000699.1	Protein Homology	CDS	686	1627	.	-	0	ID=cds-WP_261771447.1;Parent=gene-C9F04_RS21750;Dbxref=Genbank:WP_261771447.1;Name=WP_261771447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738354.1;locus_tag=C9F04_RS21750;product=Rha family transcriptional regulator;protein_id=WP_261771447.1;transl_table=11
NZ_PYKF01000699.1	RefSeq	pseudogene	1602	1700	.	-	.	ID=gene-C9F04_RS27210;Name=C9F04_RS27210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27210;partial=true;pseudo=true;start_range=.,1602
NZ_PYKF01000699.1	Protein Homology	CDS	1602	1700	.	-	0	ID=cds-C9F04_RS27210;Parent=gene-C9F04_RS27210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025339.2;locus_tag=C9F04_RS27210;partial=true;product=DUF4222 domain-containing protein;pseudo=true;start_range=.,1602;transl_table=11
NZ_PYKF01000699.1	RefSeq	pseudogene	1840	2389	.	-	.	ID=gene-C9F04_RS21755;Name=C9F04_RS21755;end_range=2389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21755;old_locus_tag=C9F04_22485;partial=true;pseudo=true
NZ_PYKF01000699.1	Protein Homology	CDS	1840	2389	.	-	1	ID=cds-C9F04_RS21755;Parent=gene-C9F04_RS21755;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=2389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=C9F04_RS21755;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000520.1 1 2385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000520.1	RefSeq	region	1	2385	.	+	.	ID=NZ_PYKF01000520.1:1..2385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000520.1	RefSeq	gene	1	116	.	-	.	ID=gene-C9F04_RS27095;Name=C9F04_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27095;partial=true;start_range=.,1
NZ_PYKF01000520.1	Protein Homology	CDS	1	116	.	-	0	ID=cds-WP_261771266.1;Parent=gene-C9F04_RS27095;Dbxref=Genbank:WP_261771266.1;Name=WP_261771266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9F04_RS27095;partial=true;product=hypothetical protein;protein_id=WP_261771266.1;start_range=.,1;transl_table=11
NZ_PYKF01000520.1	RefSeq	gene	399	458	.	+	.	ID=gene-C9F04_RS26650;Name=C9F04_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26650
NZ_PYKF01000520.1	Protein Homology	CDS	399	458	.	+	0	ID=cds-WP_105887528.1;Parent=gene-C9F04_RS26650;Dbxref=Genbank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9F04_RS26650;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11
NZ_PYKF01000520.1	RefSeq	gene	557	1909	.	-	.	ID=gene-C9F04_RS15540;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9F04_RS15540;old_locus_tag=C9F04_16025
NZ_PYKF01000520.1	Protein Homology	CDS	557	1909	.	-	0	ID=cds-WP_079954417.1;Parent=gene-C9F04_RS15540;Dbxref=Genbank:WP_079954417.1;Name=WP_079954417.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9F04_RS15540;product=molecular chaperone;protein_id=WP_079954417.1;transl_table=11
NZ_PYKF01000520.1	RefSeq	pseudogene	2043	2385	.	+	.	ID=gene-C9F04_RS15545;Name=C9F04_RS15545;end_range=2385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15545;old_locus_tag=C9F04_16035;partial=true;pseudo=true
NZ_PYKF01000520.1	Protein Homology	CDS	2043	2385	.	+	0	ID=cds-C9F04_RS15545;Parent=gene-C9F04_RS15545;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F04_RS15545;partial=true;product=DNA-3-methyladenine glycosylase 2;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000792.1 1 2382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000792.1	RefSeq	region	1	2382	.	+	.	ID=NZ_PYKF01000792.1:1..2382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000792.1	RefSeq	gene	1	493	.	-	.	ID=gene-C9F04_RS24705;Name=C9F04_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24705;old_locus_tag=C9F04_25550;partial=true;start_range=.,1
NZ_PYKF01000792.1	Protein Homology	CDS	1	493	.	-	0	ID=cds-WP_146713316.1;Parent=gene-C9F04_RS24705;Dbxref=Genbank:WP_146713316.1;Name=WP_146713316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9F04_RS24705;partial=true;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_146713316.1;start_range=.,1;transl_table=11
NZ_PYKF01000792.1	RefSeq	gene	509	1546	.	-	.	ID=gene-C9F04_RS24710;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9F04_RS24710;old_locus_tag=C9F04_25555
NZ_PYKF01000792.1	Protein Homology	CDS	509	1546	.	-	0	ID=cds-WP_146713317.1;Parent=gene-C9F04_RS24710;Dbxref=Genbank:WP_146713317.1;Name=WP_146713317.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9F04_RS24710;product=gentisate 1%2C2-dioxygenase;protein_id=WP_146713317.1;transl_table=11
NZ_PYKF01000792.1	RefSeq	gene	1558	2382	.	-	.	ID=gene-C9F04_RS24715;Name=C9F04_RS24715;end_range=2382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24715;old_locus_tag=C9F04_25560;partial=true
NZ_PYKF01000792.1	Protein Homology	CDS	1558	2382	.	-	0	ID=cds-WP_146713318.1;Parent=gene-C9F04_RS24715;Dbxref=Genbank:WP_146713318.1;Name=WP_146713318.1;Ontology_term=GO:0055085,GO:0022857;end_range=2382,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9F04_RS24715;partial=true;product=MFS transporter;protein_id=WP_146713318.1;transl_table=11
##sequence-region NZ_PYKF01000843.1 1 2328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000843.1	RefSeq	region	1	2328	.	+	.	ID=NZ_PYKF01000843.1:1..2328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000843.1	RefSeq	gene	228	1172	.	+	.	ID=gene-C9F04_RS26510;Name=C9F04_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26510;old_locus_tag=C9F04_27425
NZ_PYKF01000843.1	Protein Homology	CDS	228	1172	.	+	0	ID=cds-WP_240776469.1;Parent=gene-C9F04_RS26510;Dbxref=Genbank:WP_240776469.1;Name=WP_240776469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480477.1;locus_tag=C9F04_RS26510;product=Ivy family c-type lysozyme inhibitor;protein_id=WP_240776469.1;transl_table=11
NZ_PYKF01000843.1	RefSeq	gene	1247	1480	.	+	.	ID=gene-C9F04_RS26515;Name=C9F04_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26515;old_locus_tag=C9F04_27430
NZ_PYKF01000843.1	Protein Homology	CDS	1247	1480	.	+	0	ID=cds-WP_135369465.1;Parent=gene-C9F04_RS26515;Dbxref=Genbank:WP_135369465.1;Name=WP_135369465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229747.1;locus_tag=C9F04_RS26515;product=DUF905 domain-containing protein;protein_id=WP_135369465.1;transl_table=11
NZ_PYKF01000843.1	RefSeq	gene	1477	1707	.	+	.	ID=gene-C9F04_RS26520;Name=C9F04_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26520;old_locus_tag=C9F04_27435
NZ_PYKF01000843.1	GeneMarkS-2+	CDS	1477	1707	.	+	0	ID=cds-WP_135369464.1;Parent=gene-C9F04_RS26520;Dbxref=Genbank:WP_135369464.1;Name=WP_135369464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26520;product=hypothetical protein;protein_id=WP_135369464.1;transl_table=11
NZ_PYKF01000843.1	RefSeq	pseudogene	1816	2316	.	+	.	ID=gene-C9F04_RS26525;Name=C9F04_RS26525;end_range=2316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26525;old_locus_tag=C9F04_27440;partial=true;pseudo=true
NZ_PYKF01000843.1	Protein Homology	CDS	1816	2316	.	+	0	ID=cds-C9F04_RS26525;Parent=gene-C9F04_RS26525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546956.1;locus_tag=C9F04_RS26525;partial=true;product=DUF945 domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000687.1 1 2325
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000687.1	RefSeq	region	1	2325	.	+	.	ID=NZ_PYKF01000687.1:1..2325;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000687.1	RefSeq	pseudogene	1	345	.	+	.	ID=gene-C9F04_RS21195;Name=upp;gbkey=Gene;gene=upp;gene_biotype=pseudogene;locus_tag=C9F04_RS21195;old_locus_tag=C9F04_21885;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000687.1	Protein Homology	CDS	1	345	.	+	0	ID=cds-C9F04_RS21195;Parent=gene-C9F04_RS21195;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9F04_RS21195;partial=true;product=uracil phosphoribosyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000687.1	RefSeq	gene	433	1722	.	+	.	ID=gene-C9F04_RS21200;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9F04_RS21200;old_locus_tag=C9F04_21890
NZ_PYKF01000687.1	Protein Homology	CDS	433	1722	.	+	0	ID=cds-WP_000198345.1;Parent=gene-C9F04_RS21200;Dbxref=Genbank:WP_000198345.1;Name=WP_000198345.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=C9F04_RS21200;product=uracil permease;protein_id=WP_000198345.1;transl_table=11
NZ_PYKF01000687.1	RefSeq	pseudogene	1817	2293	.	+	.	ID=gene-C9F04_RS21205;Name=C9F04_RS21205;end_range=2293,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21205;old_locus_tag=C9F04_21895;partial=true;pseudo=true
NZ_PYKF01000687.1	Protein Homology	CDS	1817	2293	.	+	0	ID=cds-C9F04_RS21205;Parent=gene-C9F04_RS21205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2293,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9F04_RS21205;partial=true;product=DnaA inactivator Hda;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000461.1 1 2318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000461.1	RefSeq	region	1	2318	.	+	.	ID=NZ_PYKF01000461.1:1..2318;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000461.1	RefSeq	pseudogene	91	573	.	+	.	ID=gene-C9F04_RS13905;Name=C9F04_RS13905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13905;old_locus_tag=C9F04_14355;partial=true;pseudo=true;start_range=.,91
NZ_PYKF01000461.1	Protein Homology	CDS	91	573	.	+	0	ID=cds-C9F04_RS13905;Parent=gene-C9F04_RS13905;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9F04_RS13905;partial=true;product=tRNA 2-selenouridine(34) synthase MnmH;pseudo=true;start_range=.,91;transl_table=11
NZ_PYKF01000461.1	RefSeq	gene	602	1261	.	-	.	ID=gene-C9F04_RS13910;Name=C9F04_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13910;old_locus_tag=C9F04_14360
NZ_PYKF01000461.1	Protein Homology	CDS	602	1261	.	-	0	ID=cds-WP_000342247.1;Parent=gene-C9F04_RS13910;Dbxref=Genbank:WP_000342247.1;Name=WP_000342247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9F04_RS13910;product=ABC transporter permease;protein_id=WP_000342247.1;transl_table=11
NZ_PYKF01000461.1	RefSeq	gene	1254	2270	.	-	.	ID=gene-C9F04_RS13915;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9F04_RS13915;old_locus_tag=C9F04_14365
NZ_PYKF01000461.1	Protein Homology	CDS	1254	2270	.	-	0	ID=cds-WP_000569660.1;Parent=gene-C9F04_RS13915;Dbxref=Genbank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9F04_RS13915;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11
##sequence-region NZ_PYKF01000634.1 1 2304
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000634.1	RefSeq	region	1	2304	.	+	.	ID=NZ_PYKF01000634.1:1..2304;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000634.1	RefSeq	gene	1	507	.	-	.	ID=gene-C9F04_RS19280;Name=C9F04_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19280;old_locus_tag=C9F04_19910;partial=true;start_range=.,1
NZ_PYKF01000634.1	Protein Homology	CDS	1	507	.	-	0	ID=cds-WP_186799059.1;Parent=gene-C9F04_RS19280;Dbxref=Genbank:WP_186799059.1;Name=WP_186799059.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9F04_RS19280;partial=true;product=tRNA-dihydrouridine synthase;protein_id=WP_186799059.1;start_range=.,1;transl_table=11
NZ_PYKF01000634.1	RefSeq	gene	616	1809	.	-	.	ID=gene-C9F04_RS19285;Name=C9F04_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19285;old_locus_tag=C9F04_19915
NZ_PYKF01000634.1	Protein Homology	CDS	616	1809	.	-	0	ID=cds-WP_146713035.1;Parent=gene-C9F04_RS19285;Dbxref=Genbank:WP_146713035.1;Name=WP_146713035.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9F04_RS19285;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_146713035.1;transl_table=11
NZ_PYKF01000634.1	RefSeq	gene	1824	2304	.	-	.	ID=gene-C9F04_RS19290;Name=maiA;end_range=2304,.;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9F04_RS19290;old_locus_tag=C9F04_19920;partial=true
NZ_PYKF01000634.1	Protein Homology	CDS	1824	2304	.	-	1	ID=cds-WP_146713036.1;Parent=gene-C9F04_RS19290;Dbxref=Genbank:WP_146713036.1;Name=WP_146713036.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;end_range=2304,.;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9F04_RS19290;partial=true;product=maleylacetoacetate isomerase;protein_id=WP_146713036.1;transl_table=11
##sequence-region NZ_PYKF01000682.1 1 2288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000682.1	RefSeq	region	1	2288	.	+	.	ID=NZ_PYKF01000682.1:1..2288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000682.1	RefSeq	pseudogene	1	296	.	-	.	ID=gene-C9F04_RS21050;Name=C9F04_RS21050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21050;old_locus_tag=C9F04_21725;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000682.1	Protein Homology	CDS	1	296	.	-	0	ID=cds-C9F04_RS21050;Parent=gene-C9F04_RS21050;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805327.1;locus_tag=C9F04_RS21050;partial=true;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000682.1	RefSeq	gene	437	994	.	-	.	ID=gene-C9F04_RS21055;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9F04_RS21055;old_locus_tag=C9F04_21730
NZ_PYKF01000682.1	Protein Homology	CDS	437	994	.	-	0	ID=cds-WP_000622423.1;Parent=gene-C9F04_RS21055;Dbxref=Genbank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F04_RS21055;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11
NZ_PYKF01000682.1	RefSeq	gene	1141	1866	.	-	.	ID=gene-C9F04_RS21060;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9F04_RS21060;old_locus_tag=C9F04_21735
NZ_PYKF01000682.1	Protein Homology	CDS	1141	1866	.	-	0	ID=cds-WP_000224567.1;Parent=gene-C9F04_RS21060;Dbxref=Genbank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9F04_RS21060;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11
NZ_PYKF01000682.1	RefSeq	gene	2011	2288	.	-	.	ID=gene-C9F04_RS21065;Name=tsf;end_range=2288,.;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9F04_RS21065;old_locus_tag=C9F04_21740;partial=true
NZ_PYKF01000682.1	Protein Homology	CDS	2011	2288	.	-	2	ID=cds-WP_146713121.1;Parent=gene-C9F04_RS21065;Dbxref=Genbank:WP_146713121.1;Name=WP_146713121.1;Ontology_term=GO:0006414,GO:0003746;end_range=2288,.;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9F04_RS21065;partial=true;product=translation elongation factor Ts;protein_id=WP_146713121.1;transl_table=11
##sequence-region NZ_PYKF01000176.1 1 2271
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000176.1	RefSeq	region	1	2271	.	+	.	ID=NZ_PYKF01000176.1:1..2271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000176.1	RefSeq	gene	1	1242	.	+	.	ID=gene-C9F04_RS04020;Name=C9F04_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04020;old_locus_tag=C9F04_04160;partial=true;start_range=.,1
NZ_PYKF01000176.1	Protein Homology	CDS	1	1242	.	+	0	ID=cds-WP_146712315.1;Parent=gene-C9F04_RS04020;Dbxref=Genbank:WP_146712315.1;Name=WP_146712315.1;Ontology_term=GO:0005996,GO:0019317,GO:0008736,GO:0030145;gbkey=CDS;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=monosaccharide metabolic process|0005996||IEA,fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9F04_RS04020;partial=true;product=L-fucose isomerase;protein_id=WP_146712315.1;start_range=.,1;transl_table=11
NZ_PYKF01000176.1	RefSeq	gene	1343	2271	.	+	.	ID=gene-C9F04_RS04025;Name=fucK;end_range=2271,.;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9F04_RS04025;old_locus_tag=C9F04_04165;partial=true
NZ_PYKF01000176.1	Protein Homology	CDS	1343	2271	.	+	0	ID=cds-WP_146712316.1;Parent=gene-C9F04_RS04025;Dbxref=Genbank:WP_146712316.1;Name=WP_146712316.1;Ontology_term=GO:0042355,GO:0008737;end_range=2271,.;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=C9F04_RS04025;partial=true;product=L-fuculokinase;protein_id=WP_146712316.1;transl_table=11
##sequence-region NZ_PYKF01000070.1 1 16990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000070.1	RefSeq	region	1	16990	.	+	.	ID=NZ_PYKF01000070.1:1..16990;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000070.1	RefSeq	gene	32	304	.	-	.	ID=gene-C9F04_RS01280;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9F04_RS01280;old_locus_tag=C9F04_01350
NZ_PYKF01000070.1	Protein Homology	CDS	32	304	.	-	0	ID=cds-WP_000216797.1;Parent=gene-C9F04_RS01280;Dbxref=Genbank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9F04_RS01280;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	301	1155	.	-	.	ID=gene-C9F04_RS01285;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9F04_RS01285;old_locus_tag=C9F04_01355
NZ_PYKF01000070.1	Protein Homology	CDS	301	1155	.	-	0	ID=cds-WP_000243749.1;Parent=gene-C9F04_RS01285;Dbxref=Genbank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9F04_RS01285;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	1201	1692	.	-	.	ID=gene-C9F04_RS01290;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9F04_RS01290;old_locus_tag=C9F04_01360
NZ_PYKF01000070.1	Protein Homology	CDS	1201	1692	.	-	0	ID=cds-WP_000609332.1;Parent=gene-C9F04_RS01290;Dbxref=Genbank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9F04_RS01290;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	1810	2097	.	-	.	ID=gene-C9F04_RS01295;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9F04_RS01295;old_locus_tag=C9F04_01365
NZ_PYKF01000070.1	Protein Homology	CDS	1810	2097	.	-	0	ID=cds-WP_001176589.1;Parent=gene-C9F04_RS01295;Dbxref=Genbank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9F04_RS01295;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	2120	3553	.	-	.	ID=gene-C9F04_RS01300;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9F04_RS01300;old_locus_tag=C9F04_01370
NZ_PYKF01000070.1	Protein Homology	CDS	2120	3553	.	-	0	ID=cds-WP_146712186.1;Parent=gene-C9F04_RS01300;Dbxref=Genbank:WP_146712186.1;Name=WP_146712186.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9F04_RS01300;product=RNA polymerase factor sigma-54;protein_id=WP_146712186.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	3601	4326	.	-	.	ID=gene-C9F04_RS01305;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9F04_RS01305;old_locus_tag=C9F04_01375
NZ_PYKF01000070.1	Protein Homology	CDS	3601	4326	.	-	0	ID=cds-WP_000224104.1;Parent=gene-C9F04_RS01305;Dbxref=Genbank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9F04_RS01305;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	4333	4887	.	-	.	ID=gene-C9F04_RS01310;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9F04_RS01310;old_locus_tag=C9F04_01380
NZ_PYKF01000070.1	Protein Homology	CDS	4333	4887	.	-	0	ID=cds-WP_000669770.1;Parent=gene-C9F04_RS01310;Dbxref=Genbank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9F04_RS01310;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	4856	5431	.	-	.	ID=gene-C9F04_RS01315;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9F04_RS01315;old_locus_tag=C9F04_01385
NZ_PYKF01000070.1	Protein Homology	CDS	4856	5431	.	-	0	ID=cds-WP_000047845.1;Parent=gene-C9F04_RS01315;Dbxref=Genbank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9F04_RS01315;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	5428	5994	.	-	.	ID=gene-C9F04_RS01320;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9F04_RS01320;old_locus_tag=C9F04_01390
NZ_PYKF01000070.1	Protein Homology	CDS	5428	5994	.	-	0	ID=cds-WP_000030029.1;Parent=gene-C9F04_RS01320;Dbxref=Genbank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9F04_RS01320;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	6015	7001	.	-	.	ID=gene-C9F04_RS01325;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9F04_RS01325;old_locus_tag=C9F04_01395
NZ_PYKF01000070.1	Protein Homology	CDS	6015	7001	.	-	0	ID=cds-WP_000018617.1;Parent=gene-C9F04_RS01325;Dbxref=Genbank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9F04_RS01325;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	7015	7992	.	-	.	ID=gene-C9F04_RS01330;Name=C9F04_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01330;old_locus_tag=C9F04_01400
NZ_PYKF01000070.1	Protein Homology	CDS	7015	7992	.	-	0	ID=cds-WP_000922736.1;Parent=gene-C9F04_RS01330;Dbxref=Genbank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9F04_RS01330;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	8205	9017	.	+	.	ID=gene-C9F04_RS01335;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9F04_RS01335;old_locus_tag=C9F04_01405
NZ_PYKF01000070.1	Protein Homology	CDS	8205	9017	.	+	0	ID=cds-WP_000531566.1;Parent=gene-C9F04_RS01335;Dbxref=Genbank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9F04_RS01335;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	9025	9807	.	+	.	ID=gene-C9F04_RS01340;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9F04_RS01340;old_locus_tag=C9F04_01410
NZ_PYKF01000070.1	Protein Homology	CDS	9025	9807	.	+	0	ID=cds-WP_000925786.1;Parent=gene-C9F04_RS01340;Dbxref=Genbank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F04_RS01340;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	9812	10363	.	+	.	ID=gene-C9F04_RS01345;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9F04_RS01345;old_locus_tag=C9F04_01415
NZ_PYKF01000070.1	Protein Homology	CDS	9812	10363	.	+	0	ID=cds-WP_001193589.1;Parent=gene-C9F04_RS01345;Dbxref=Genbank:WP_001193589.1;Name=WP_001193589.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9F04_RS01345;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193589.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	10382	11017	.	+	.	ID=gene-C9F04_RS01350;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9F04_RS01350;old_locus_tag=C9F04_01420
NZ_PYKF01000070.1	Protein Homology	CDS	10382	11017	.	+	0	ID=cds-WP_000476467.1;Parent=gene-C9F04_RS01350;Dbxref=Genbank:WP_000476467.1;Name=WP_000476467.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9F04_RS01350;product=phospholipid-binding protein MlaC;protein_id=WP_000476467.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	11017	11313	.	+	.	ID=gene-C9F04_RS01355;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9F04_RS01355;old_locus_tag=C9F04_01425
NZ_PYKF01000070.1	Protein Homology	CDS	11017	11313	.	+	0	ID=cds-WP_000188844.1;Parent=gene-C9F04_RS01355;Dbxref=Genbank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9F04_RS01355;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	11501	11755	.	+	.	ID=gene-C9F04_RS01360;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9F04_RS01360;old_locus_tag=C9F04_01430
NZ_PYKF01000070.1	Protein Homology	CDS	11501	11755	.	+	0	ID=cds-WP_001518349.1;Parent=gene-C9F04_RS01360;Dbxref=Genbank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9F04_RS01360;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	11809	13068	.	+	.	ID=gene-C9F04_RS01365;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9F04_RS01365;old_locus_tag=C9F04_01435
NZ_PYKF01000070.1	Protein Homology	CDS	11809	13068	.	+	0	ID=cds-WP_146712187.1;Parent=gene-C9F04_RS01365;Dbxref=Genbank:WP_146712187.1;Name=WP_146712187.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9F04_RS01365;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_146712187.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	13127	13414	.	-	.	ID=gene-C9F04_RS01370;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9F04_RS01370;old_locus_tag=C9F04_01440
NZ_PYKF01000070.1	Protein Homology	CDS	13127	13414	.	-	0	ID=cds-WP_000444167.1;Parent=gene-C9F04_RS01370;Dbxref=Genbank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9F04_RS01370;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	13646	14617	.	-	.	ID=gene-C9F04_RS01375;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9F04_RS01375;old_locus_tag=C9F04_01445
NZ_PYKF01000070.1	Protein Homology	CDS	13646	14617	.	-	0	ID=cds-WP_001047354.1;Parent=gene-C9F04_RS01375;Dbxref=Genbank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9F04_RS01375;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	14875	15186	.	+	.	ID=gene-C9F04_RS01380;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9F04_RS01380;old_locus_tag=C9F04_01450
NZ_PYKF01000070.1	Protein Homology	CDS	14875	15186	.	+	0	ID=cds-WP_000271396.1;Parent=gene-C9F04_RS01380;Dbxref=Genbank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9F04_RS01380;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	15206	15463	.	+	.	ID=gene-C9F04_RS01385;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9F04_RS01385;old_locus_tag=C9F04_01455
NZ_PYKF01000070.1	Protein Homology	CDS	15206	15463	.	+	0	ID=cds-WP_000940593.1;Parent=gene-C9F04_RS01385;Dbxref=Genbank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9F04_RS01385;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	gene	15593	16558	.	+	.	ID=gene-C9F04_RS01390;Name=C9F04_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01390;old_locus_tag=C9F04_01460
NZ_PYKF01000070.1	Protein Homology	CDS	15593	16558	.	+	0	ID=cds-WP_000813052.1;Parent=gene-C9F04_RS01390;Dbxref=Genbank:WP_000813052.1;Name=WP_000813052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F04_RS01390;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11
NZ_PYKF01000070.1	RefSeq	pseudogene	16574	16927	.	+	.	ID=gene-C9F04_RS01395;Name=obgE;end_range=16927,.;gbkey=Gene;gene=obgE;gene_biotype=pseudogene;gene_synonym=cgtA,obg,yhbZ;locus_tag=C9F04_RS01395;old_locus_tag=C9F04_01465;partial=true;pseudo=true
NZ_PYKF01000070.1	Protein Homology	CDS	16574	16927	.	+	0	ID=cds-C9F04_RS01395;Parent=gene-C9F04_RS01395;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16927,.;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=C9F04_RS01395;partial=true;product=GTPase ObgE;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000445.1 1 2269
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000445.1	RefSeq	region	1	2269	.	+	.	ID=NZ_PYKF01000445.1:1..2269;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000445.1	RefSeq	gene	1	436	.	-	.	ID=gene-C9F04_RS13330;Name=C9F04_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13330;old_locus_tag=C9F04_13765;partial=true;start_range=.,1
NZ_PYKF01000445.1	Protein Homology	CDS	1	436	.	-	0	ID=cds-WP_146712745.1;Parent=gene-C9F04_RS13330;Dbxref=Genbank:WP_146712745.1;Name=WP_146712745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9F04_RS13330;partial=true;product=50S ribosomal protein L1;protein_id=WP_146712745.1;start_range=.,1;transl_table=11
NZ_PYKF01000445.1	RefSeq	gene	440	868	.	-	.	ID=gene-C9F04_RS13335;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9F04_RS13335;old_locus_tag=C9F04_13770
NZ_PYKF01000445.1	Protein Homology	CDS	440	868	.	-	0	ID=cds-WP_001085926.1;Parent=gene-C9F04_RS13335;Dbxref=Genbank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9F04_RS13335;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_PYKF01000445.1	RefSeq	gene	1026	1571	.	-	.	ID=gene-C9F04_RS13340;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9F04_RS13340;old_locus_tag=C9F04_13775
NZ_PYKF01000445.1	Protein Homology	CDS	1026	1571	.	-	0	ID=cds-WP_001287521.1;Parent=gene-C9F04_RS13340;Dbxref=Genbank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9F04_RS13340;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11
NZ_PYKF01000445.1	RefSeq	gene	1573	1956	.	-	.	ID=gene-C9F04_RS13345;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9F04_RS13345;old_locus_tag=C9F04_13780
NZ_PYKF01000445.1	Protein Homology	CDS	1573	1956	.	-	0	ID=cds-WP_146712746.1;Parent=gene-C9F04_RS13345;Dbxref=Genbank:WP_146712746.1;Name=WP_146712746.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9F04_RS13345;product=preprotein translocase subunit SecE;protein_id=WP_146712746.1;transl_table=11
NZ_PYKF01000445.1	RefSeq	gene	2186	2269	.	-	.	ID=gene-C9F04_RS13350;Name=C9F04_RS13350;end_range=2269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13350;old_locus_tag=C9F04_13785;partial=true
NZ_PYKF01000445.1	Protein Homology	CDS	2186	2269	.	-	0	ID=cds-WP_000740160.1;Parent=gene-C9F04_RS13350;Dbxref=Genbank:WP_000740160.1;Name=WP_000740160.1;end_range=2269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F04_RS13350;partial=true;product=hypothetical protein;protein_id=WP_000740160.1;transl_table=11
##sequence-region NZ_PYKF01000465.1 1 2263
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000465.1	RefSeq	region	1	2263	.	+	.	ID=NZ_PYKF01000465.1:1..2263;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000465.1	RefSeq	pseudogene	1	1659	.	-	.	ID=gene-C9F04_RS13995;Name=C9F04_RS13995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13995;old_locus_tag=C9F04_14445;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000465.1	Protein Homology	CDS	1	1659	.	-	0	ID=cds-C9F04_RS13995;Parent=gene-C9F04_RS13995;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F04_RS13995;partial=true;product=molybdopterin-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000465.1	RefSeq	pseudogene	1787	2263	.	-	.	ID=gene-C9F04_RS14000;Name=C9F04_RS14000;end_range=2263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14000;old_locus_tag=C9F04_14450;partial=true;pseudo=true
NZ_PYKF01000465.1	Protein Homology	CDS	1787	2263	.	-	0	ID=cds-C9F04_RS14000;Parent=gene-C9F04_RS14000;Note=penicillin-insensitive transglycosylase/transpeptidase%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F04_RS14000;partial=true;product=penicillin-binding protein 1C;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000593.1 1 2236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000593.1	RefSeq	region	1	2236	.	+	.	ID=NZ_PYKF01000593.1:1..2236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000593.1	RefSeq	pseudogene	1	209	.	+	.	ID=gene-C9F04_RS17610;Name=C9F04_RS17610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17610;old_locus_tag=C9F04_18170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000593.1	Protein Homology	CDS	1	209	.	+	2	ID=cds-C9F04_RS17610;Parent=gene-C9F04_RS17610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=C9F04_RS17610;partial=true;product=capsid protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000593.1	RefSeq	gene	226	1290	.	+	.	ID=gene-C9F04_RS17615;Name=C9F04_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17615;old_locus_tag=C9F04_18175
NZ_PYKF01000593.1	Protein Homology	CDS	226	1290	.	+	0	ID=cds-WP_135369584.1;Parent=gene-C9F04_RS17615;Dbxref=Genbank:WP_135369584.1;Name=WP_135369584.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894826.1;locus_tag=C9F04_RS17615;product=phage major capsid protein%2C P2 family;protein_id=WP_135369584.1;transl_table=11
NZ_PYKF01000593.1	RefSeq	gene	1294	1944	.	+	.	ID=gene-C9F04_RS17620;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=C9F04_RS17620;old_locus_tag=C9F04_18180
NZ_PYKF01000593.1	Protein Homology	CDS	1294	1944	.	+	0	ID=cds-WP_135369585.1;Parent=gene-C9F04_RS17620;Dbxref=Genbank:WP_135369585.1;Name=WP_135369585.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=C9F04_RS17620;product=phage terminase small subunit;protein_id=WP_135369585.1;transl_table=11
##sequence-region NZ_PYKF01000500.1 1 2208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000500.1	RefSeq	region	1	2208	.	+	.	ID=NZ_PYKF01000500.1:1..2208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000500.1	RefSeq	pseudogene	63	689	.	+	.	ID=gene-C9F04_RS15020;Name=C9F04_RS15020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15020;old_locus_tag=C9F04_15500;partial=true;pseudo=true;start_range=.,63
NZ_PYKF01000500.1	Protein Homology	CDS	63	689	.	+	0	ID=cds-C9F04_RS15020;Parent=gene-C9F04_RS15020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310336.1;locus_tag=C9F04_RS15020;partial=true;product=proton-translocating transhydrogenase family protein;pseudo=true;start_range=.,63;transl_table=11
NZ_PYKF01000500.1	RefSeq	gene	700	2088	.	+	.	ID=gene-C9F04_RS15025;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9F04_RS15025;old_locus_tag=C9F04_15505
NZ_PYKF01000500.1	Protein Homology	CDS	700	2088	.	+	0	ID=cds-WP_146712817.1;Parent=gene-C9F04_RS15025;Dbxref=Genbank:WP_146712817.1;Name=WP_146712817.1;Ontology_term=GO:0008750,GO:0050661,GO:0016021;gbkey=CDS;gene=pntB;go_component=integral component of membrane|0016021||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F04_RS15025;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_146712817.1;transl_table=11
##sequence-region NZ_PYKF01000566.1 1 2184
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000566.1	RefSeq	region	1	2184	.	+	.	ID=NZ_PYKF01000566.1:1..2184;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000566.1	RefSeq	gene	1	166	.	+	.	ID=gene-C9F04_RS16920;Name=C9F04_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16920;old_locus_tag=C9F04_17460;partial=true;start_range=.,1
NZ_PYKF01000566.1	Protein Homology	CDS	1	166	.	+	1	ID=cds-WP_146712916.1;Parent=gene-C9F04_RS16920;Dbxref=Genbank:WP_146712916.1;Name=WP_146712916.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9F04_RS16920;partial=true;product=cold shock domain-containing protein;protein_id=WP_146712916.1;start_range=.,1;transl_table=11
NZ_PYKF01000566.1	RefSeq	gene	296	2182	.	-	.	ID=gene-C9F04_RS16925;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9F04_RS16925;old_locus_tag=C9F04_17470
NZ_PYKF01000566.1	Protein Homology	CDS	296	2182	.	-	0	ID=cds-WP_261771323.1;Parent=gene-C9F04_RS16925;Dbxref=Genbank:WP_261771323.1;Name=WP_261771323.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9F04_RS16925;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_261771323.1;transl_table=11
##sequence-region NZ_PYKF01000080.1 1 2174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000080.1	RefSeq	region	1	2174	.	+	.	ID=NZ_PYKF01000080.1:1..2174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000080.1	RefSeq	gene	1	923	.	+	.	ID=gene-C9F04_RS01605;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9F04_RS01605;old_locus_tag=C9F04_01675;partial=true;start_range=.,1
NZ_PYKF01000080.1	Protein Homology	CDS	1	923	.	+	2	ID=cds-WP_146712200.1;Parent=gene-C9F04_RS01605;Dbxref=Genbank:WP_146712200.1;Name=WP_146712200.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9F04_RS01605;partial=true;product=lysine--tRNA ligase;protein_id=WP_146712200.1;start_range=.,1;transl_table=11
NZ_PYKF01000080.1	RefSeq	gene	999	1544	.	-	.	ID=gene-C9F04_RS01610;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9F04_RS01610;old_locus_tag=C9F04_01680
NZ_PYKF01000080.1	Protein Homology	CDS	999	1544	.	-	0	ID=cds-WP_000134000.1;Parent=gene-C9F04_RS01610;Dbxref=Genbank:WP_000134000.1;Name=WP_000134000.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9F04_RS01610;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000134000.1;transl_table=11
NZ_PYKF01000080.1	RefSeq	gene	1809	2174	.	+	.	ID=gene-C9F04_RS01615;Name=C9F04_RS01615;end_range=2174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01615;old_locus_tag=C9F04_01685;partial=true
NZ_PYKF01000080.1	Protein Homology	CDS	1809	2174	.	+	0	ID=cds-WP_146712201.1;Parent=gene-C9F04_RS01615;Dbxref=Genbank:WP_146712201.1;Name=WP_146712201.1;end_range=2174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9F04_RS01615;partial=true;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_146712201.1;transl_table=11
##sequence-region NZ_PYKF01000783.1 1 2166
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000783.1	RefSeq	region	1	2166	.	+	.	ID=NZ_PYKF01000783.1:1..2166;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000783.1	RefSeq	gene	1	1133	.	-	.	ID=gene-C9F04_RS24440;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9F04_RS24440;old_locus_tag=C9F04_25265;partial=true;start_range=.,1
NZ_PYKF01000783.1	Protein Homology	CDS	1	1133	.	-	0	ID=cds-WP_146713299.1;Parent=gene-C9F04_RS24440;Dbxref=Genbank:WP_146713299.1;Name=WP_146713299.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=C9F04_RS24440;partial=true;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_146713299.1;start_range=.,1;transl_table=11
NZ_PYKF01000783.1	RefSeq	gene	1211	2166	.	-	.	ID=gene-C9F04_RS24445;Name=C9F04_RS24445;end_range=2166,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24445;old_locus_tag=C9F04_25270;partial=true
NZ_PYKF01000783.1	Protein Homology	CDS	1211	2166	.	-	2	ID=cds-WP_146713300.1;Parent=gene-C9F04_RS24445;Dbxref=Genbank:WP_146713300.1;Name=WP_146713300.1;end_range=2166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9F04_RS24445;partial=true;product=MlaD family protein;protein_id=WP_146713300.1;transl_table=11
##sequence-region NZ_PYKF01000029.1 1 2163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000029.1	RefSeq	region	1	2163	.	+	.	ID=NZ_PYKF01000029.1:1..2163;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000029.1	RefSeq	pseudogene	1	1127	.	+	.	ID=gene-C9F04_RS00395;Name=C9F04_RS00395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00395;old_locus_tag=C9F04_00425;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000029.1	Protein Homology	CDS	1	1127	.	+	2	ID=cds-C9F04_RS00395;Parent=gene-C9F04_RS00395;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9F04_RS00395;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000029.1	RefSeq	gene	1320	2153	.	+	.	ID=gene-C9F04_RS00400;Name=C9F04_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00400;old_locus_tag=C9F04_00430
NZ_PYKF01000029.1	Protein Homology	CDS	1320	2153	.	+	0	ID=cds-WP_001667936.1;Parent=gene-C9F04_RS00400;Dbxref=Genbank:WP_001667936.1;Name=WP_001667936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=C9F04_RS00400;product=glycosyltransferase family 2 protein;protein_id=WP_001667936.1;transl_table=11
##sequence-region NZ_PYKF01000184.1 1 2162
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000184.1	RefSeq	region	1	2162	.	+	.	ID=NZ_PYKF01000184.1:1..2162;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000184.1	RefSeq	gene	1	470	.	-	.	ID=gene-C9F04_RS04200;Name=C9F04_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04200;old_locus_tag=C9F04_04340;partial=true;start_range=.,1
NZ_PYKF01000184.1	Protein Homology	CDS	1	470	.	-	0	ID=cds-WP_146712324.1;Parent=gene-C9F04_RS04200;Dbxref=Genbank:WP_146712324.1;Name=WP_146712324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9F04_RS04200;partial=true;product=histidine--tRNA ligase;protein_id=WP_146712324.1;start_range=.,1;transl_table=11
NZ_PYKF01000184.1	RefSeq	gene	581	1699	.	-	.	ID=gene-C9F04_RS04205;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9F04_RS04205;old_locus_tag=C9F04_04345
NZ_PYKF01000184.1	Protein Homology	CDS	581	1699	.	-	0	ID=cds-WP_000551804.1;Parent=gene-C9F04_RS04205;Dbxref=Genbank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9F04_RS04205;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11
NZ_PYKF01000184.1	RefSeq	pseudogene	1726	2162	.	-	.	ID=gene-C9F04_RS04210;Name=C9F04_RS04210;end_range=2162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04210;old_locus_tag=C9F04_04350;partial=true;pseudo=true
NZ_PYKF01000184.1	Protein Homology	CDS	1726	2162	.	-	2	ID=cds-C9F04_RS04210;Parent=gene-C9F04_RS04210;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=2162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9F04_RS04210;partial=true;product=DUF4115 domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000484.1 1 2159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000484.1	RefSeq	region	1	2159	.	+	.	ID=NZ_PYKF01000484.1:1..2159;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000484.1	RefSeq	pseudogene	1	273	.	+	.	ID=gene-C9F04_RS14590;Name=C9F04_RS14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14590;old_locus_tag=C9F04_15075;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000484.1	Protein Homology	CDS	1	273	.	+	0	ID=cds-C9F04_RS14590;Parent=gene-C9F04_RS14590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F04_RS14590;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000484.1	RefSeq	gene	276	803	.	+	.	ID=gene-C9F04_RS14595;Name=C9F04_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14595;old_locus_tag=C9F04_15080
NZ_PYKF01000484.1	Protein Homology	CDS	276	803	.	+	0	ID=cds-WP_000680167.1;Parent=gene-C9F04_RS14595;Dbxref=Genbank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=C9F04_RS14595;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11
NZ_PYKF01000484.1	RefSeq	gene	934	2106	.	+	.	ID=gene-C9F04_RS14600;Name=C9F04_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14600;old_locus_tag=C9F04_15085
NZ_PYKF01000484.1	Protein Homology	CDS	934	2106	.	+	0	ID=cds-WP_094914708.1;Parent=gene-C9F04_RS14600;Dbxref=Genbank:WP_094914708.1;Name=WP_094914708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9F04_RS14600;product=phage tail sheath protein;protein_id=WP_094914708.1;transl_table=11
##sequence-region NZ_PYKF01000552.1 1 16961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000552.1	RefSeq	region	1	16961	.	+	.	ID=NZ_PYKF01000552.1:1..16961;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000552.1	RefSeq	gene	1	298	.	+	.	ID=gene-C9F04_RS16520;Name=C9F04_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16520;old_locus_tag=C9F04_17020;partial=true;start_range=.,1
NZ_PYKF01000552.1	Protein Homology	CDS	1	298	.	+	1	ID=cds-WP_146712891.1;Parent=gene-C9F04_RS16520;Dbxref=Genbank:WP_146712891.1;Name=WP_146712891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9F04_RS16520;partial=true;product=glucuronate isomerase;protein_id=WP_146712891.1;start_range=.,1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	598	1656	.	-	.	ID=gene-C9F04_RS16525;Name=C9F04_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16525;old_locus_tag=C9F04_17025
NZ_PYKF01000552.1	Protein Homology	CDS	598	1656	.	-	0	ID=cds-WP_135369176.1;Parent=gene-C9F04_RS16525;Dbxref=Genbank:WP_135369176.1;Name=WP_135369176.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9F04_RS16525;product=methyl-accepting chemotaxis protein;protein_id=WP_135369176.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	2326	4182	.	-	.	ID=gene-C9F04_RS16530;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9F04_RS16530;old_locus_tag=C9F04_17035
NZ_PYKF01000552.1	Protein Homology	CDS	2326	4182	.	-	0	ID=cds-WP_146712892.1;Parent=gene-C9F04_RS16530;Dbxref=Genbank:WP_146712892.1;Name=WP_146712892.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9F04_RS16530;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_146712892.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	4409	5275	.	+	.	ID=gene-C9F04_RS16535;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9F04_RS16535;old_locus_tag=C9F04_17040
NZ_PYKF01000552.1	Protein Homology	CDS	4409	5275	.	+	0	ID=cds-WP_023207094.1;Parent=gene-C9F04_RS16535;Dbxref=Genbank:WP_023207094.1;Name=WP_023207094.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9F04_RS16535;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_023207094.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	5343	6053	.	-	.	ID=gene-C9F04_RS16540;Name=C9F04_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16540;old_locus_tag=C9F04_17045
NZ_PYKF01000552.1	Protein Homology	CDS	5343	6053	.	-	0	ID=cds-WP_146712893.1;Parent=gene-C9F04_RS16540;Dbxref=Genbank:WP_146712893.1;Name=WP_146712893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9F04_RS16540;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_146712893.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	6053	7105	.	-	.	ID=gene-C9F04_RS16545;Name=C9F04_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16545;old_locus_tag=C9F04_17050
NZ_PYKF01000552.1	Protein Homology	CDS	6053	7105	.	-	0	ID=cds-WP_023244900.1;Parent=gene-C9F04_RS16545;Dbxref=Genbank:WP_023244900.1;Name=WP_023244900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9F04_RS16545;product=ABC transporter substrate-binding protein;protein_id=WP_023244900.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	7181	7429	.	-	.	ID=gene-C9F04_RS16550;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9F04_RS16550;old_locus_tag=C9F04_17055
NZ_PYKF01000552.1	Protein Homology	CDS	7181	7429	.	-	0	ID=cds-WP_000334887.1;Parent=gene-C9F04_RS16550;Dbxref=Genbank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9F04_RS16550;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	7457	7798	.	-	.	ID=gene-C9F04_RS16555;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F04_RS16555;old_locus_tag=C9F04_17060
NZ_PYKF01000552.1	Protein Homology	CDS	7457	7798	.	-	0	ID=cds-WP_000544946.1;Parent=gene-C9F04_RS16555;Dbxref=Genbank:WP_000544946.1;Name=WP_000544946.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9F04_RS16555;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544946.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	7791	8279	.	-	.	ID=gene-C9F04_RS16560;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9F04_RS16560;old_locus_tag=C9F04_17065
NZ_PYKF01000552.1	Protein Homology	CDS	7791	8279	.	-	0	ID=cds-WP_000004951.1;Parent=gene-C9F04_RS16560;Dbxref=Genbank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9F04_RS16560;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	8272	8766	.	-	.	ID=gene-C9F04_RS16565;Name=C9F04_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16565;old_locus_tag=C9F04_17070
NZ_PYKF01000552.1	Protein Homology	CDS	8272	8766	.	-	0	ID=cds-WP_001221960.1;Parent=gene-C9F04_RS16565;Dbxref=Genbank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9F04_RS16565;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	8766	10469	.	-	.	ID=gene-C9F04_RS16570;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9F04_RS16570;old_locus_tag=C9F04_17075
NZ_PYKF01000552.1	Protein Homology	CDS	8766	10469	.	-	0	ID=cds-WP_146712894.1;Parent=gene-C9F04_RS16570;Dbxref=Genbank:WP_146712894.1;Name=WP_146712894.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9F04_RS16570;product=hydrogenase 2 large subunit;protein_id=WP_146712894.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	10466	11644	.	-	.	ID=gene-C9F04_RS16575;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9F04_RS16575;old_locus_tag=C9F04_17080
NZ_PYKF01000552.1	Protein Homology	CDS	10466	11644	.	-	0	ID=cds-WP_000017678.1;Parent=gene-C9F04_RS16575;Dbxref=Genbank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9F04_RS16575;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	11634	12620	.	-	.	ID=gene-C9F04_RS16580;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9F04_RS16580;old_locus_tag=C9F04_17085
NZ_PYKF01000552.1	Protein Homology	CDS	11634	12620	.	-	0	ID=cds-WP_001081721.1;Parent=gene-C9F04_RS16580;Dbxref=Genbank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9F04_RS16580;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	12623	13741	.	-	.	ID=gene-C9F04_RS16585;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9F04_RS16585;old_locus_tag=C9F04_17090
NZ_PYKF01000552.1	Protein Homology	CDS	12623	13741	.	-	0	ID=cds-WP_000145429.1;Parent=gene-C9F04_RS16585;Dbxref=Genbank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9F04_RS16585;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	13931	14218	.	-	.	ID=gene-C9F04_RS16590;Name=C9F04_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16590;old_locus_tag=C9F04_17100
NZ_PYKF01000552.1	Protein Homology	CDS	13931	14218	.	-	0	ID=cds-WP_001059119.1;Parent=gene-C9F04_RS16590;Dbxref=Genbank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9F04_RS16590;product=DUF2623 domain-containing protein;protein_id=WP_001059119.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	14303	15946	.	-	.	ID=gene-C9F04_RS16595;Name=C9F04_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16595;old_locus_tag=C9F04_17105
NZ_PYKF01000552.1	Protein Homology	CDS	14303	15946	.	-	0	ID=cds-WP_001238434.1;Parent=gene-C9F04_RS16595;Dbxref=Genbank:WP_001238434.1;Name=WP_001238434.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F04_RS16595;product=methyl-accepting chemotaxis protein;protein_id=WP_001238434.1;transl_table=11
NZ_PYKF01000552.1	RefSeq	gene	16253	16747	.	-	.	ID=gene-C9F04_RS16600;Name=C9F04_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16600;old_locus_tag=C9F04_17110
NZ_PYKF01000552.1	Protein Homology	CDS	16253	16747	.	-	0	ID=cds-WP_000439335.1;Parent=gene-C9F04_RS16600;Dbxref=Genbank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9F04_RS16600;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11
##sequence-region NZ_PYKF01000444.1 1 2156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000444.1	RefSeq	region	1	2156	.	+	.	ID=NZ_PYKF01000444.1:1..2156;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000444.1	RefSeq	pseudogene	1	634	.	+	.	ID=gene-C9F04_RS13320;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=pseudogene;locus_tag=C9F04_RS13320;old_locus_tag=C9F04_13755;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000444.1	Protein Homology	CDS	1	634	.	+	1	ID=cds-C9F04_RS13320;Parent=gene-C9F04_RS13320;Note=antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9F04_RS13320;partial=true;product=cadaverine/lysine antiporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000444.1	RefSeq	pseudogene	717	2120	.	+	.	ID=gene-C9F04_RS13325;Name=cadA;end_range=2120,.;gbkey=Gene;gene=cadA;gene_biotype=pseudogene;locus_tag=C9F04_RS13325;old_locus_tag=C9F04_13760;partial=true;pseudo=true
NZ_PYKF01000444.1	Protein Homology	CDS	717	2120	.	+	0	ID=cds-C9F04_RS13325;Parent=gene-C9F04_RS13325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2120,.;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9F04_RS13325;partial=true;product=lysine decarboxylase CadA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000597.1 1 2144
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000597.1	RefSeq	region	1	2144	.	+	.	ID=NZ_PYKF01000597.1:1..2144;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000597.1	RefSeq	pseudogene	124	2100	.	-	.	ID=gene-C9F04_RS17780;Name=malP;end_range=2100,.;gbkey=Gene;gene=malP;gene_biotype=pseudogene;locus_tag=C9F04_RS17780;old_locus_tag=C9F04_18345;partial=true;pseudo=true
NZ_PYKF01000597.1	Protein Homology	CDS	124	2100	.	-	0	ID=cds-C9F04_RS17780;Parent=gene-C9F04_RS17780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0008184,GO:0030170;end_range=2100,.;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9F04_RS17780;partial=true;product=maltodextrin phosphorylase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000708.1 1 2136
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000708.1	RefSeq	region	1	2136	.	+	.	ID=NZ_PYKF01000708.1:1..2136;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000708.1	RefSeq	gene	1	440	.	-	.	ID=gene-C9F04_RS21985;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9F04_RS21985;old_locus_tag=C9F04_22720;partial=true;start_range=.,1
NZ_PYKF01000708.1	Protein Homology	CDS	1	440	.	-	0	ID=cds-WP_146713173.1;Parent=gene-C9F04_RS21985;Dbxref=Genbank:WP_146713173.1;Name=WP_146713173.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9F04_RS21985;partial=true;product=gluconokinase;protein_id=WP_146713173.1;start_range=.,1;transl_table=11
NZ_PYKF01000708.1	RefSeq	gene	579	1574	.	-	.	ID=gene-C9F04_RS21990;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9F04_RS21990;old_locus_tag=C9F04_22725
NZ_PYKF01000708.1	Protein Homology	CDS	579	1574	.	-	0	ID=cds-WP_146713174.1;Parent=gene-C9F04_RS21990;Dbxref=Genbank:WP_146713174.1;Name=WP_146713174.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9F04_RS21990;product=gluconate operon transcriptional repressor GntR;protein_id=WP_146713174.1;transl_table=11
NZ_PYKF01000708.1	RefSeq	pseudogene	1799	2136	.	-	.	ID=gene-C9F04_RS21995;Name=C9F04_RS21995;end_range=2136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21995;old_locus_tag=C9F04_22730;partial=true;pseudo=true
NZ_PYKF01000708.1	Protein Homology	CDS	1799	2136	.	-	2	ID=cds-C9F04_RS21995;Parent=gene-C9F04_RS21995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9F04_RS21995;partial=true;product=pirin family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000585.1 1 2103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000585.1	RefSeq	region	1	2103	.	+	.	ID=NZ_PYKF01000585.1:1..2103;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000585.1	RefSeq	gene	1	143	.	+	.	ID=gene-C9F04_RS17445;Name=C9F04_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17445;old_locus_tag=C9F04_18005;partial=true;start_range=.,1
NZ_PYKF01000585.1	Protein Homology	CDS	1	143	.	+	2	ID=cds-WP_146712946.1;Parent=gene-C9F04_RS17445;Dbxref=Genbank:WP_146712946.1;Name=WP_146712946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9F04_RS17445;partial=true;product=DUF488 family protein;protein_id=WP_146712946.1;start_range=.,1;transl_table=11
NZ_PYKF01000585.1	RefSeq	gene	129	440	.	-	.	ID=gene-C9F04_RS17450;Name=C9F04_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17450;old_locus_tag=C9F04_18010
NZ_PYKF01000585.1	Protein Homology	CDS	129	440	.	-	0	ID=cds-WP_000487126.1;Parent=gene-C9F04_RS17450;Dbxref=Genbank:WP_000487126.1;Name=WP_000487126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9F04_RS17450;product=hypothetical protein;protein_id=WP_000487126.1;transl_table=11
NZ_PYKF01000585.1	RefSeq	gene	509	760	.	-	.	ID=gene-C9F04_RS17455;Name=C9F04_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17455;old_locus_tag=C9F04_18015
NZ_PYKF01000585.1	Protein Homology	CDS	509	760	.	-	0	ID=cds-WP_000673492.1;Parent=gene-C9F04_RS17455;Dbxref=Genbank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9F04_RS17455;product=DUF333 domain-containing protein;protein_id=WP_000673492.1;transl_table=11
NZ_PYKF01000585.1	RefSeq	gene	956	1054	.	+	.	ID=gene-C9F04_RS17460;Name=C9F04_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17460;old_locus_tag=C9F04_18020
NZ_PYKF01000585.1	Protein Homology	CDS	956	1054	.	+	0	ID=cds-WP_001589065.1;Parent=gene-C9F04_RS17460;Dbxref=Genbank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9F04_RS17460;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11
NZ_PYKF01000585.1	RefSeq	gene	1193	1441	.	-	.	ID=gene-C9F04_RS17465;Name=C9F04_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17465;old_locus_tag=C9F04_18025
NZ_PYKF01000585.1	Protein Homology	CDS	1193	1441	.	-	0	ID=cds-WP_146712947.1;Parent=gene-C9F04_RS17465;Dbxref=Genbank:WP_146712947.1;Name=WP_146712947.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9F04_RS17465;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_146712947.1;transl_table=11
NZ_PYKF01000585.1	RefSeq	pseudogene	1755	2103	.	-	.	ID=gene-C9F04_RS17470;Name=C9F04_RS17470;end_range=2103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17470;old_locus_tag=C9F04_18030;partial=true;pseudo=true
NZ_PYKF01000585.1	Protein Homology	CDS	1755	2103	.	-	1	ID=cds-C9F04_RS17470;Parent=gene-C9F04_RS17470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9F04_RS17470;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000638.1 1 2075
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000638.1	RefSeq	region	1	2075	.	+	.	ID=NZ_PYKF01000638.1:1..2075;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000638.1	RefSeq	gene	1	2075	.	+	.	ID=gene-C9F04_RS19550;Name=C9F04_RS19550;end_range=2075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19550;old_locus_tag=C9F04_20185;partial=true;start_range=.,1
NZ_PYKF01000638.1	Protein Homology	CDS	1	2075	.	+	2	ID=cds-WP_146713050.1;Parent=gene-C9F04_RS19550;Dbxref=Genbank:WP_146713050.1;Name=WP_146713050.1;end_range=2075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9F04_RS19550;partial=true;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_146713050.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000733.1 1 2023
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000733.1	RefSeq	region	1	2023	.	+	.	ID=NZ_PYKF01000733.1:1..2023;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000733.1	RefSeq	gene	1	554	.	+	.	ID=gene-C9F04_RS22735;Name=C9F04_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22735;old_locus_tag=C9F04_23495;partial=true;start_range=.,1
NZ_PYKF01000733.1	Protein Homology	CDS	1	554	.	+	2	ID=cds-WP_222591893.1;Parent=gene-C9F04_RS22735;Dbxref=Genbank:WP_222591893.1;Name=WP_222591893.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954626.1;locus_tag=C9F04_RS22735;partial=true;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_222591893.1;start_range=.,1;transl_table=11
NZ_PYKF01000733.1	RefSeq	gene	696	1256	.	-	.	ID=gene-C9F04_RS22740;Name=C9F04_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22740;old_locus_tag=C9F04_23500
NZ_PYKF01000733.1	Protein Homology	CDS	696	1256	.	-	0	ID=cds-WP_000220926.1;Parent=gene-C9F04_RS22740;Dbxref=Genbank:WP_000220926.1;Name=WP_000220926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=C9F04_RS22740;product=hypothetical protein;protein_id=WP_000220926.1;transl_table=11
NZ_PYKF01000733.1	RefSeq	gene	1253	2023	.	-	.	ID=gene-C9F04_RS22745;Name=C9F04_RS22745;end_range=2023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22745;old_locus_tag=C9F04_23505;partial=true
NZ_PYKF01000733.1	Protein Homology	CDS	1253	2023	.	-	0	ID=cds-WP_146713220.1;Parent=gene-C9F04_RS22745;Dbxref=Genbank:WP_146713220.1;Name=WP_146713220.1;Note=catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester;end_range=2023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=C9F04_RS22745;partial=true;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_146713220.1;transl_table=11
##sequence-region NZ_PYKF01000066.1 1 2037
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000066.1	RefSeq	region	1	2037	.	+	.	ID=NZ_PYKF01000066.1:1..2037;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000066.1	RefSeq	gene	1	321	.	-	.	ID=gene-C9F04_RS01215;Name=C9F04_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01215;old_locus_tag=C9F04_01285;partial=true;start_range=.,1
NZ_PYKF01000066.1	Protein Homology	CDS	1	321	.	-	0	ID=cds-WP_146712183.1;Parent=gene-C9F04_RS01215;Dbxref=Genbank:WP_146712183.1;Name=WP_146712183.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F04_RS01215;partial=true;product=GntR family transcriptional regulator;protein_id=WP_146712183.1;start_range=.,1;transl_table=11
NZ_PYKF01000066.1	RefSeq	gene	410	841	.	+	.	ID=gene-C9F04_RS01220;Name=C9F04_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01220;old_locus_tag=C9F04_01290
NZ_PYKF01000066.1	Protein Homology	CDS	410	841	.	+	0	ID=cds-WP_000209815.1;Parent=gene-C9F04_RS01220;Dbxref=Genbank:WP_000209815.1;Name=WP_000209815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9F04_RS01220;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209815.1;transl_table=11
NZ_PYKF01000066.1	RefSeq	gene	1113	1358	.	+	.	ID=gene-C9F04_RS01230;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9F04_RS01230;old_locus_tag=C9F04_01300
NZ_PYKF01000066.1	Protein Homology	CDS	1113	1358	.	+	0	ID=cds-WP_000028870.1;Parent=gene-C9F04_RS01230;Dbxref=Genbank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9F04_RS01230;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11
NZ_PYKF01000066.1	RefSeq	gene	1355	1765	.	+	.	ID=gene-C9F04_RS01235;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9F04_RS01235;old_locus_tag=C9F04_01305
NZ_PYKF01000066.1	Protein Homology	CDS	1355	1765	.	+	0	ID=cds-WP_001275401.1;Parent=gene-C9F04_RS01235;Dbxref=Genbank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9F04_RS01235;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11
NZ_PYKF01000066.1	RefSeq	pseudogene	1738	2037	.	+	.	ID=gene-C9F04_RS01240;Name=C9F04_RS01240;end_range=2037,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01240;old_locus_tag=C9F04_01310;partial=true;pseudo=true
NZ_PYKF01000066.1	Protein Homology	CDS	1738	2037	.	+	0	ID=cds-C9F04_RS01240;Parent=gene-C9F04_RS01240;Note=Catalyzes the rate-limiting step in dNTP synthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077527.1;locus_tag=C9F04_RS01240;partial=true;product=ribonucleotide-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000780.1 1 2034
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000780.1	RefSeq	region	1	2034	.	+	.	ID=NZ_PYKF01000780.1:1..2034;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000780.1	RefSeq	gene	1	2034	.	+	.	ID=gene-C9F04_RS24405;Name=C9F04_RS24405;end_range=2034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24405;old_locus_tag=C9F04_25225;partial=true;start_range=.,1
NZ_PYKF01000780.1	Protein Homology	CDS	1	2034	.	+	2	ID=cds-WP_146713294.1;Parent=gene-C9F04_RS24405;Dbxref=Genbank:WP_146713294.1;Name=WP_146713294.1;end_range=2034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F04_RS24405;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_146713294.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000032.1 1 2005
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000032.1	RefSeq	region	1	2005	.	+	.	ID=NZ_PYKF01000032.1:1..2005;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000032.1	RefSeq	gene	1	171	.	-	.	ID=gene-C9F04_RS00480;Name=C9F04_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00480;old_locus_tag=C9F04_00510;partial=true;start_range=.,1
NZ_PYKF01000032.1	Protein Homology	CDS	1	171	.	-	0	ID=cds-WP_186798974.1;Parent=gene-C9F04_RS00480;Dbxref=Genbank:WP_186798974.1;Name=WP_186798974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9F04_RS00480;partial=true;product=antibiotic biosynthesis monooxygenase;protein_id=WP_186798974.1;start_range=.,1;transl_table=11
NZ_PYKF01000032.1	RefSeq	gene	203	784	.	-	.	ID=gene-C9F04_RS00485;Name=C9F04_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00485;old_locus_tag=C9F04_00515
NZ_PYKF01000032.1	Protein Homology	CDS	203	784	.	-	0	ID=cds-WP_000065416.1;Parent=gene-C9F04_RS00485;Dbxref=Genbank:WP_000065416.1;Name=WP_000065416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F04_RS00485;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11
NZ_PYKF01000032.1	RefSeq	gene	891	2005	.	-	.	ID=gene-C9F04_RS00490;Name=qseC;end_range=2005,.;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9F04_RS00490;old_locus_tag=C9F04_00520;partial=true
NZ_PYKF01000032.1	Protein Homology	CDS	891	2005	.	-	2	ID=cds-WP_146712149.1;Parent=gene-C9F04_RS00490;Dbxref=Genbank:WP_146712149.1;Name=WP_146712149.1;Ontology_term=GO:0007165,GO:0000155;end_range=2005,.;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9F04_RS00490;partial=true;product=two-component system sensor histidine kinase QseC;protein_id=WP_146712149.1;transl_table=11
##sequence-region NZ_PYKF01000095.1 1 1994
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000095.1	RefSeq	region	1	1994	.	+	.	ID=NZ_PYKF01000095.1:1..1994;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000095.1	RefSeq	pseudogene	121	393	.	+	.	ID=gene-C9F04_RS01750;Name=C9F04_RS01750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01750;old_locus_tag=C9F04_01835;partial=true;pseudo=true;start_range=.,121
NZ_PYKF01000095.1	Protein Homology	CDS	121	393	.	+	0	ID=cds-C9F04_RS01750;Parent=gene-C9F04_RS01750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9F04_RS01750;partial=true;product=transposase;pseudo=true;start_range=.,121;transl_table=11
NZ_PYKF01000095.1	RefSeq	gene	603	1994	.	+	.	ID=gene-C9F04_RS01755;Name=C9F04_RS01755;end_range=1994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01755;old_locus_tag=C9F04_01840;partial=true
NZ_PYKF01000095.1	Protein Homology	CDS	603	1994	.	+	0	ID=cds-WP_261770735.1;Parent=gene-C9F04_RS01755;Dbxref=Genbank:WP_261770735.1;Name=WP_261770735.1;end_range=1994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718072.1;locus_tag=C9F04_RS01755;partial=true;product=toxin-antitoxin system YwqK family antitoxin;protein_id=WP_261770735.1;transl_table=11
##sequence-region NZ_PYKF01000313.1 1 16940
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000313.1	RefSeq	region	1	16940	.	+	.	ID=NZ_PYKF01000313.1:1..16940;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000313.1	RefSeq	gene	1	906	.	-	.	ID=gene-C9F04_RS09170;Name=C9F04_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09170;old_locus_tag=C9F04_09475;partial=true;start_range=.,1
NZ_PYKF01000313.1	Protein Homology	CDS	1	906	.	-	0	ID=cds-WP_146712529.1;Parent=gene-C9F04_RS09170;Dbxref=Genbank:WP_146712529.1;Name=WP_146712529.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9F04_RS09170;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_146712529.1;start_range=.,1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	1050	2474	.	+	.	ID=gene-C9F04_RS09175;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9F04_RS09175;old_locus_tag=C9F04_09480
NZ_PYKF01000313.1	Protein Homology	CDS	1050	2474	.	+	0	ID=cds-WP_146712530.1;Parent=gene-C9F04_RS09175;Dbxref=Genbank:WP_146712530.1;Name=WP_146712530.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9F04_RS09175;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_146712530.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	2679	3725	.	+	.	ID=gene-C9F04_RS09180;Name=C9F04_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09180;old_locus_tag=C9F04_09485
NZ_PYKF01000313.1	Protein Homology	CDS	2679	3725	.	+	0	ID=cds-WP_001018045.1;Parent=gene-C9F04_RS09180;Dbxref=Genbank:WP_001018045.1;Name=WP_001018045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9F04_RS09180;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	3722	4195	.	+	.	ID=gene-C9F04_RS09185;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9F04_RS09185;old_locus_tag=C9F04_09490
NZ_PYKF01000313.1	Protein Homology	CDS	3722	4195	.	+	0	ID=cds-WP_000084477.1;Parent=gene-C9F04_RS09185;Dbxref=Genbank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9F04_RS09185;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	4353	5231	.	+	.	ID=gene-C9F04_RS09190;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9F04_RS09190;old_locus_tag=C9F04_09495
NZ_PYKF01000313.1	Protein Homology	CDS	4353	5231	.	+	0	ID=cds-WP_001278612.1;Parent=gene-C9F04_RS09190;Dbxref=Genbank:WP_001278612.1;Name=WP_001278612.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9F04_RS09190;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278612.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	5251	6789	.	+	.	ID=gene-C9F04_RS09195;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9F04_RS09195;old_locus_tag=C9F04_09500
NZ_PYKF01000313.1	Protein Homology	CDS	5251	6789	.	+	0	ID=cds-WP_135369790.1;Parent=gene-C9F04_RS09195;Dbxref=Genbank:WP_135369790.1;Name=WP_135369790.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016021;gbkey=CDS;gene=lnt;go_component=integral component of membrane|0016021||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9F04_RS09195;product=apolipoprotein N-acyltransferase;protein_id=WP_135369790.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	7144	8052	.	+	.	ID=gene-C9F04_RS09200;Name=C9F04_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09200;old_locus_tag=C9F04_09505
NZ_PYKF01000313.1	Protein Homology	CDS	7144	8052	.	+	0	ID=cds-WP_186799016.1;Parent=gene-C9F04_RS09200;Dbxref=Genbank:WP_186799016.1;Name=WP_186799016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9F04_RS09200;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_186799016.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	8212	8952	.	+	.	ID=gene-C9F04_RS09205;Name=C9F04_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09205;old_locus_tag=C9F04_09510
NZ_PYKF01000313.1	Protein Homology	CDS	8212	8952	.	+	0	ID=cds-WP_146712532.1;Parent=gene-C9F04_RS09205;Dbxref=Genbank:WP_146712532.1;Name=WP_146712532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9F04_RS09205;product=amino acid ABC transporter permease;protein_id=WP_146712532.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	8952	9626	.	+	.	ID=gene-C9F04_RS09210;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9F04_RS09210;old_locus_tag=C9F04_09515
NZ_PYKF01000313.1	Protein Homology	CDS	8952	9626	.	+	0	ID=cds-WP_000272794.1;Parent=gene-C9F04_RS09210;Dbxref=Genbank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9F04_RS09210;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	9626	10351	.	+	.	ID=gene-C9F04_RS09215;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9F04_RS09215;old_locus_tag=C9F04_09520
NZ_PYKF01000313.1	Protein Homology	CDS	9626	10351	.	+	0	ID=cds-WP_000631369.1;Parent=gene-C9F04_RS09215;Dbxref=Genbank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9F04_RS09215;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	10468	11403	.	+	.	ID=gene-C9F04_RS09220;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9F04_RS09220;old_locus_tag=C9F04_09525
NZ_PYKF01000313.1	Protein Homology	CDS	10468	11403	.	+	0	ID=cds-WP_146712533.1;Parent=gene-C9F04_RS09220;Dbxref=Genbank:WP_146712533.1;Name=WP_146712533.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9F04_RS09220;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_146712533.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	11435	12673	.	+	.	ID=gene-C9F04_RS09225;Name=C9F04_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09225;old_locus_tag=C9F04_09530
NZ_PYKF01000313.1	Protein Homology	CDS	11435	12673	.	+	0	ID=cds-WP_135369785.1;Parent=gene-C9F04_RS09225;Dbxref=Genbank:WP_135369785.1;Name=WP_135369785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9F04_RS09225;product=hypothetical protein;protein_id=WP_135369785.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	12749	14428	.	+	.	ID=gene-C9F04_RS09230;Name=C9F04_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09230;old_locus_tag=C9F04_09535
NZ_PYKF01000313.1	Protein Homology	CDS	12749	14428	.	+	0	ID=cds-WP_001523337.1;Parent=gene-C9F04_RS09230;Dbxref=Genbank:WP_001523337.1;Name=WP_001523337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9F04_RS09230;product=molecular chaperone HscC;protein_id=WP_001523337.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	14450	15922	.	-	.	ID=gene-C9F04_RS09235;Name=C9F04_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09235;old_locus_tag=C9F04_09540
NZ_PYKF01000313.1	Protein Homology	CDS	14450	15922	.	-	0	ID=cds-WP_103132974.1;Parent=gene-C9F04_RS09235;Dbxref=Genbank:WP_103132974.1;Name=WP_103132974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9F04_RS09235;product=J domain-containing protein;protein_id=WP_103132974.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	gene	15919	16623	.	-	.	ID=gene-C9F04_RS09240;Name=C9F04_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09240;old_locus_tag=C9F04_09545
NZ_PYKF01000313.1	Protein Homology	CDS	15919	16623	.	-	0	ID=cds-WP_000356620.1;Parent=gene-C9F04_RS09240;Dbxref=Genbank:WP_000356620.1;Name=WP_000356620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9F04_RS09240;product=DUF1266 domain-containing protein;protein_id=WP_000356620.1;transl_table=11
NZ_PYKF01000313.1	RefSeq	pseudogene	16635	16814	.	-	.	ID=gene-C9F04_RS09245;Name=C9F04_RS09245;end_range=16814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09245;old_locus_tag=C9F04_09550;partial=true;pseudo=true
NZ_PYKF01000313.1	Protein Homology	CDS	16635	16814	.	-	0	ID=cds-C9F04_RS09245;Parent=gene-C9F04_RS09245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9F04_RS09245;partial=true;product=J domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000313.1	RefSeq	pseudogene	16866	16940	.	+	.	ID=gene-C9F04_RS26995;Name=C9F04_RS26995;end_range=16940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26995;partial=true;pseudo=true;start_range=.,16866
NZ_PYKF01000313.1	Protein Homology	CDS	16866	16940	.	+	0	ID=cds-C9F04_RS26995;Parent=gene-C9F04_RS26995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9F04_RS26995;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16866;transl_table=11
##sequence-region NZ_PYKF01000368.1 1 1979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000368.1	RefSeq	region	1	1979	.	+	.	ID=NZ_PYKF01000368.1:1..1979;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000368.1	RefSeq	gene	1	396	.	-	.	ID=gene-C9F04_RS10775;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9F04_RS10775;old_locus_tag=C9F04_11110;partial=true;start_range=.,1
NZ_PYKF01000368.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-WP_146712621.1;Parent=gene-C9F04_RS10775;Dbxref=Genbank:WP_146712621.1;Name=WP_146712621.1;Ontology_term=GO:0015848,GO:0015606,GO:0016021;gbkey=CDS;gene=mdtJ;go_component=integral component of membrane|0016021||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9F04_RS10775;partial=true;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_146712621.1;start_range=.,1;transl_table=11
NZ_PYKF01000368.1	RefSeq	gene	814	1848	.	+	.	ID=gene-C9F04_RS10785;Name=C9F04_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10785;old_locus_tag=C9F04_11120
NZ_PYKF01000368.1	Protein Homology	CDS	814	1848	.	+	0	ID=cds-WP_001118268.1;Parent=gene-C9F04_RS10785;Dbxref=Genbank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9F04_RS10785;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11
##sequence-region NZ_PYKF01000826.1 1 1976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000826.1	RefSeq	region	1	1976	.	+	.	ID=NZ_PYKF01000826.1:1..1976;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000826.1	RefSeq	pseudogene	1	483	.	+	.	ID=gene-C9F04_RS25910;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=pseudogene;locus_tag=C9F04_RS25910;old_locus_tag=C9F04_26815;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000826.1	Protein Homology	CDS	1	483	.	+	0	ID=cds-C9F04_RS25910;Parent=gene-C9F04_RS25910;Note=converts asparagine to aspartate and ammonia%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9F04_RS25910;partial=true;product=asparaginase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000826.1	RefSeq	gene	510	1166	.	+	.	ID=gene-C9F04_RS25915;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9F04_RS25915;old_locus_tag=C9F04_26820
NZ_PYKF01000826.1	Protein Homology	CDS	510	1166	.	+	0	ID=cds-WP_000184707.1;Parent=gene-C9F04_RS25915;Dbxref=Genbank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9F04_RS25915;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11
NZ_PYKF01000826.1	RefSeq	gene	1269	1976	.	-	.	ID=gene-C9F04_RS25920;Name=C9F04_RS25920;end_range=1976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25920;old_locus_tag=C9F04_26825;partial=true
NZ_PYKF01000826.1	Protein Homology	CDS	1269	1976	.	-	0	ID=cds-WP_146713371.1;Parent=gene-C9F04_RS25920;Dbxref=Genbank:WP_146713371.1;Name=WP_146713371.1;Ontology_term=GO:0055085,GO:0022857;end_range=1976,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=C9F04_RS25920;partial=true;product=MFS transporter;protein_id=WP_146713371.1;transl_table=11
##sequence-region NZ_PYKF01000725.1 1 1976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000725.1	RefSeq	region	1	1976	.	+	.	ID=NZ_PYKF01000725.1:1..1976;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000725.1	RefSeq	gene	1	980	.	-	.	ID=gene-C9F04_RS22485;Name=C9F04_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22485;old_locus_tag=C9F04_23240;partial=true;start_range=.,1
NZ_PYKF01000725.1	Protein Homology	CDS	1	980	.	-	0	ID=cds-WP_261771471.1;Parent=gene-C9F04_RS22485;Dbxref=Genbank:WP_261771471.1;Name=WP_261771471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9F04_RS22485;partial=true;product=ATP cone domain-containing protein;protein_id=WP_261771471.1;start_range=.,1;transl_table=11
NZ_PYKF01000725.1	RefSeq	gene	1389	1976	.	-	.	ID=gene-C9F04_RS22490;Name=C9F04_RS22490;end_range=1976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22490;old_locus_tag=C9F04_23245;partial=true
NZ_PYKF01000725.1	Protein Homology	CDS	1389	1976	.	-	0	ID=cds-WP_146713203.1;Parent=gene-C9F04_RS22490;Dbxref=Genbank:WP_146713203.1;Name=WP_146713203.1;end_range=1976,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9F04_RS22490;partial=true;product=DUF3459 domain-containing protein;protein_id=WP_146713203.1;transl_table=11
##sequence-region NZ_PYKF01000722.1 1 1961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000722.1	RefSeq	region	1	1961	.	+	.	ID=NZ_PYKF01000722.1:1..1961;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000722.1	RefSeq	pseudogene	1	629	.	+	.	ID=gene-C9F04_RS22385;Name=C9F04_RS22385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22385;old_locus_tag=C9F04_23125;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000722.1	Protein Homology	CDS	1	629	.	+	2	ID=cds-C9F04_RS22385;Parent=gene-C9F04_RS22385;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9F04_RS22385;partial=true;product=VirK/YbjX family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000722.1	RefSeq	gene	626	1961	.	-	.	ID=gene-C9F04_RS22390;Name=C9F04_RS22390;end_range=1961,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22390;old_locus_tag=C9F04_23130;partial=true
NZ_PYKF01000722.1	Protein Homology	CDS	626	1961	.	-	1	ID=cds-WP_146713195.1;Parent=gene-C9F04_RS22390;Dbxref=Genbank:WP_146713195.1;Name=WP_146713195.1;end_range=1961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F04_RS22390;partial=true;product=ATP-dependent endonuclease;protein_id=WP_146713195.1;transl_table=11
##sequence-region NZ_PYKF01000828.1 1 1945
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000828.1	RefSeq	region	1	1945	.	+	.	ID=NZ_PYKF01000828.1:1..1945;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000828.1	RefSeq	gene	1	1945	.	-	.	ID=gene-C9F04_RS25945;Name=valS;end_range=1945,.;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=C9F04_RS25945;old_locus_tag=C9F04_26850;partial=true;start_range=.,1
NZ_PYKF01000828.1	Protein Homology	CDS	1	1945	.	-	0	ID=cds-WP_146713373.1;Parent=gene-C9F04_RS25945;Dbxref=Genbank:WP_146713373.1;Name=WP_146713373.1;Ontology_term=GO:0006438,GO:0004832,GO:0005737;end_range=1945,.;gbkey=CDS;gene=valS;go_component=cytoplasm|0005737||IEA;go_function=valine-tRNA ligase activity|0004832||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F04_RS25945;partial=true;product=valine--tRNA ligase;protein_id=WP_146713373.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000326.1 1 1921
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000326.1	RefSeq	region	1	1921	.	+	.	ID=NZ_PYKF01000326.1:1..1921;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000326.1	RefSeq	gene	1	812	.	-	.	ID=gene-C9F04_RS09515;Name=C9F04_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09515;old_locus_tag=C9F04_09820;partial=true;start_range=.,1
NZ_PYKF01000326.1	Protein Homology	CDS	1	812	.	-	0	ID=cds-WP_146712551.1;Parent=gene-C9F04_RS09515;Dbxref=Genbank:WP_146712551.1;Name=WP_146712551.1;Ontology_term=GO:0006083,GO:0006113,GO:0008776,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acetate kinase activity|0008776||IEA;go_process=acetate metabolic process|0006083||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9F04_RS09515;partial=true;product=acetate/propionate family kinase;protein_id=WP_146712551.1;start_range=.,1;transl_table=11
NZ_PYKF01000326.1	RefSeq	pseudogene	879	1921	.	-	.	ID=gene-C9F04_RS09520;Name=tdcC;end_range=1921,.;gbkey=Gene;gene=tdcC;gene_biotype=pseudogene;locus_tag=C9F04_RS09520;old_locus_tag=C9F04_09825;partial=true;pseudo=true
NZ_PYKF01000326.1	Protein Homology	CDS	879	1921	.	-	2	ID=cds-C9F04_RS09520;Parent=gene-C9F04_RS09520;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=1921,.;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9F04_RS09520;partial=true;product=threonine/serine transporter TdcC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000381.1 1 1918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000381.1	RefSeq	region	1	1918	.	+	.	ID=NZ_PYKF01000381.1:1..1918;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000381.1	RefSeq	pseudogene	1	1918	.	-	.	ID=gene-C9F04_RS11185;Name=tamB;end_range=1918,.;gbkey=Gene;gene=tamB;gene_biotype=pseudogene;locus_tag=C9F04_RS11185;old_locus_tag=C9F04_11545;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000381.1	Protein Homology	CDS	1	1918	.	-	2	ID=cds-C9F04_RS11185;Parent=gene-C9F04_RS11185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1918,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F04_RS11185;partial=true;product=autotransporter assembly complex protein TamB;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000006.1 1 1910
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000006.1	RefSeq	region	1	1910	.	+	.	ID=NZ_PYKF01000006.1:1..1910;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000006.1	RefSeq	gene	1	212	.	-	.	ID=gene-C9F04_RS00060;Name=C9F04_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00060;old_locus_tag=C9F04_00075;partial=true;start_range=.,1
NZ_PYKF01000006.1	Protein Homology	CDS	1	212	.	-	0	ID=cds-WP_000031661.1;Parent=gene-C9F04_RS00060;Dbxref=Genbank:WP_000031661.1;Name=WP_000031661.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F04_RS00060;partial=true;product=GTP-binding protein;protein_id=WP_000031661.1;start_range=.,1;transl_table=11
NZ_PYKF01000006.1	RefSeq	gene	284	1910	.	-	.	ID=gene-C9F04_RS00065;Name=fusA;end_range=1910,.;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9F04_RS00065;old_locus_tag=C9F04_00080;partial=true
NZ_PYKF01000006.1	Protein Homology	CDS	284	1910	.	-	1	ID=cds-WP_146712125.1;Parent=gene-C9F04_RS00065;Dbxref=Genbank:WP_146712125.1;Name=WP_146712125.1;Ontology_term=GO:0006414,GO:0003746;end_range=1910,.;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120577.1;locus_tag=C9F04_RS00065;partial=true;product=elongation factor G;protein_id=WP_146712125.1;transl_table=11
##sequence-region NZ_PYKF01000390.1 1 1901
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000390.1	RefSeq	region	1	1901	.	+	.	ID=NZ_PYKF01000390.1:1..1901;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000390.1	RefSeq	gene	1	889	.	-	.	ID=gene-C9F04_RS11485;Name=C9F04_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11485;old_locus_tag=C9F04_11870;partial=true;start_range=.,1
NZ_PYKF01000390.1	Protein Homology	CDS	1	889	.	-	0	ID=cds-WP_146712654.1;Parent=gene-C9F04_RS11485;Dbxref=Genbank:WP_146712654.1;Name=WP_146712654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F04_RS11485;partial=true;product=2-isopropylmalate synthase;protein_id=WP_146712654.1;start_range=.,1;transl_table=11
NZ_PYKF01000390.1	RefSeq	gene	977	1063	.	-	.	ID=gene-C9F04_RS11490;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9F04_RS11490;old_locus_tag=C9F04_11875
NZ_PYKF01000390.1	Protein Homology	CDS	977	1063	.	-	0	ID=cds-WP_001575587.1;Parent=gene-C9F04_RS11490;Dbxref=Genbank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9F04_RS11490;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11
NZ_PYKF01000390.1	RefSeq	pseudogene	1720	1901	.	+	.	ID=gene-C9F04_RS11495;Name=leuO;end_range=1901,.;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=C9F04_RS11495;old_locus_tag=C9F04_11880;partial=true;pseudo=true
NZ_PYKF01000390.1	Protein Homology	CDS	1720	1901	.	+	0	ID=cds-C9F04_RS11495;Parent=gene-C9F04_RS11495;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1901,.;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9F04_RS11495;partial=true;product=transcriptional regulator LeuO;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000545.1 1 1900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000545.1	RefSeq	region	1	1900	.	+	.	ID=NZ_PYKF01000545.1:1..1900;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000545.1	RefSeq	gene	1	880	.	+	.	ID=gene-C9F04_RS16280;Name=C9F04_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16280;old_locus_tag=C9F04_16780;partial=true;start_range=.,1
NZ_PYKF01000545.1	Protein Homology	CDS	1	880	.	+	1	ID=cds-WP_186799043.1;Parent=gene-C9F04_RS16280;Dbxref=Genbank:WP_186799043.1;Name=WP_186799043.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=C9F04_RS16280;partial=true;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_186799043.1;start_range=.,1;transl_table=11
NZ_PYKF01000545.1	RefSeq	gene	969	1900	.	-	.	ID=gene-C9F04_RS16285;Name=melB;end_range=1900,.;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9F04_RS16285;old_locus_tag=C9F04_16785;partial=true
NZ_PYKF01000545.1	Protein Homology	CDS	969	1900	.	-	2	ID=cds-WP_146712881.1;Parent=gene-C9F04_RS16285;Dbxref=Genbank:WP_146712881.1;Name=WP_146712881.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016021;end_range=1900,.;gbkey=CDS;gene=melB;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453409.1;locus_tag=C9F04_RS16285;partial=true;product=melibiose:sodium transporter MelB;protein_id=WP_146712881.1;transl_table=11
##sequence-region NZ_PYKF01000019.1 1 16870
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000019.1	RefSeq	region	1	16870	.	+	.	ID=NZ_PYKF01000019.1:1..16870;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000019.1	RefSeq	pseudogene	1	779	.	-	.	ID=gene-C9F04_RS00220;Name=C9F04_RS00220;end_range=779,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00220;old_locus_tag=C9F04_00240;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000019.1	Protein Homology	CDS	1	779	.	-	0	ID=cds-C9F04_RS00220;Parent=gene-C9F04_RS00220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=779,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9F04_RS00220;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	773	964	.	+	.	ID=gene-C9F04_RS00225;Name=C9F04_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00225;old_locus_tag=C9F04_00245
NZ_PYKF01000019.1	Protein Homology	CDS	773	964	.	+	0	ID=cds-WP_077942161.1;Parent=gene-C9F04_RS00225;Dbxref=Genbank:WP_077942161.1;Name=WP_077942161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9F04_RS00225;product=SymE family type I addiction module toxin;protein_id=WP_077942161.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	1003	1503	.	-	.	ID=gene-C9F04_RS00230;Name=C9F04_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00230;old_locus_tag=C9F04_00250
NZ_PYKF01000019.1	Protein Homology	CDS	1003	1503	.	-	0	ID=cds-WP_080110572.1;Parent=gene-C9F04_RS00230;Dbxref=Genbank:WP_080110572.1;Name=WP_080110572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232789.1;locus_tag=C9F04_RS00230;product=hypothetical protein;protein_id=WP_080110572.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	1679	1933	.	-	.	ID=gene-C9F04_RS26840;Name=C9F04_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26840
NZ_PYKF01000019.1	GeneMarkS-2+	CDS	1679	1933	.	-	0	ID=cds-WP_167850426.1;Parent=gene-C9F04_RS26840;Dbxref=Genbank:WP_167850426.1;Name=WP_167850426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26840;product=hypothetical protein;protein_id=WP_167850426.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	2096	2542	.	-	.	ID=gene-C9F04_RS00235;Name=C9F04_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00235;old_locus_tag=C9F04_00255
NZ_PYKF01000019.1	Protein Homology	CDS	2096	2542	.	-	0	ID=cds-WP_000171102.1;Parent=gene-C9F04_RS00235;Dbxref=Genbank:WP_000171102.1;Name=WP_000171102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9F04_RS00235;product=hypothetical protein;protein_id=WP_000171102.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	2539	7182	.	-	.	ID=gene-C9F04_RS26535;Name=C9F04_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26535
NZ_PYKF01000019.1	Protein Homology	CDS	2539	7182	.	-	0	ID=cds-WP_186798973.1;Parent=gene-C9F04_RS26535;Dbxref=Genbank:WP_186798973.1;Name=WP_186798973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=C9F04_RS26535;product=DUF6531 domain-containing protein;protein_id=WP_186798973.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	7198	7656	.	-	.	ID=gene-C9F04_RS00245;Name=C9F04_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00245;old_locus_tag=C9F04_00265
NZ_PYKF01000019.1	Protein Homology	CDS	7198	7656	.	-	0	ID=cds-WP_000186514.1;Parent=gene-C9F04_RS00245;Dbxref=Genbank:WP_000186514.1;Name=WP_000186514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=C9F04_RS00245;product=DcrB-related protein;protein_id=WP_000186514.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	7716	9950	.	-	.	ID=gene-C9F04_RS00250;Name=C9F04_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00250;old_locus_tag=C9F04_00270
NZ_PYKF01000019.1	Protein Homology	CDS	7716	9950	.	-	0	ID=cds-WP_023250542.1;Parent=gene-C9F04_RS00250;Dbxref=Genbank:WP_023250542.1;Name=WP_023250542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=C9F04_RS00250;product=type VI secretion system Vgr family protein;protein_id=WP_023250542.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	10347	10868	.	-	.	ID=gene-C9F04_RS00255;Name=C9F04_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00255;old_locus_tag=C9F04_00280
NZ_PYKF01000019.1	Protein Homology	CDS	10347	10868	.	-	0	ID=cds-WP_023994364.1;Parent=gene-C9F04_RS00255;Dbxref=Genbank:WP_023994364.1;Name=WP_023994364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9F04_RS00255;product=DUF2778 domain-containing protein;protein_id=WP_023994364.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	10892	11308	.	-	.	ID=gene-C9F04_RS00260;Name=C9F04_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00260;old_locus_tag=C9F04_00285
NZ_PYKF01000019.1	Protein Homology	CDS	10892	11308	.	-	0	ID=cds-WP_023227777.1;Parent=gene-C9F04_RS00260;Dbxref=Genbank:WP_023227777.1;Name=WP_023227777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9F04_RS00260;product=DUF2195 family protein;protein_id=WP_023227777.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	pseudogene	11305	11399	.	-	.	ID=gene-C9F04_RS26735;Name=C9F04_RS26735;end_range=11399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26735;partial=true;pseudo=true
NZ_PYKF01000019.1	Protein Homology	CDS	11305	11399	.	-	0	ID=cds-C9F04_RS26735;Parent=gene-C9F04_RS26735;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=C9F04_RS26735;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	11435	11896	.	-	.	ID=gene-C9F04_RS00265;Name=C9F04_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00265;old_locus_tag=C9F04_00290
NZ_PYKF01000019.1	Protein Homology	CDS	11435	11896	.	-	0	ID=cds-WP_001684272.1;Parent=gene-C9F04_RS00265;Dbxref=Genbank:WP_001684272.1;Name=WP_001684272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9F04_RS00265;product=hypothetical protein;protein_id=WP_001684272.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	11881	12351	.	-	.	ID=gene-C9F04_RS00270;Name=C9F04_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00270;old_locus_tag=C9F04_00295
NZ_PYKF01000019.1	Protein Homology	CDS	11881	12351	.	-	0	ID=cds-WP_000528843.1;Parent=gene-C9F04_RS00270;Dbxref=Genbank:WP_000528843.1;Name=WP_000528843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9F04_RS00270;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	12394	13161	.	-	.	ID=gene-C9F04_RS00275;Name=C9F04_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00275;old_locus_tag=C9F04_00300
NZ_PYKF01000019.1	Protein Homology	CDS	12394	13161	.	-	0	ID=cds-WP_146712135.1;Parent=gene-C9F04_RS00275;Dbxref=Genbank:WP_146712135.1;Name=WP_146712135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=C9F04_RS00275;product=TagF domain-containing protein;protein_id=WP_146712135.1;transl_table=11
NZ_PYKF01000019.1	RefSeq	gene	13161	16868	.	-	.	ID=gene-C9F04_RS00280;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=C9F04_RS00280;old_locus_tag=C9F04_00305
NZ_PYKF01000019.1	Protein Homology	CDS	13161	16868	.	-	0	ID=cds-WP_261770723.1;Parent=gene-C9F04_RS00280;Dbxref=Genbank:WP_261770723.1;Name=WP_261770723.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F04_RS00280;product=type VI secretion system membrane subunit TssM;protein_id=WP_261770723.1;transl_table=11
##sequence-region NZ_PYKF01000775.1 1 1899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000775.1	RefSeq	region	1	1899	.	+	.	ID=NZ_PYKF01000775.1:1..1899;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000775.1	RefSeq	gene	1	551	.	-	.	ID=gene-C9F04_RS24270;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9F04_RS24270;old_locus_tag=C9F04_25090;partial=true;start_range=.,1
NZ_PYKF01000775.1	Protein Homology	CDS	1	551	.	-	0	ID=cds-WP_146713287.1;Parent=gene-C9F04_RS24270;Dbxref=Genbank:WP_146713287.1;Name=WP_146713287.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9F04_RS24270;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_146713287.1;start_range=.,1;transl_table=11
NZ_PYKF01000775.1	RefSeq	gene	677	1899	.	+	.	ID=gene-C9F04_RS24275;Name=C9F04_RS24275;end_range=1899,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24275;old_locus_tag=C9F04_25095;partial=true
NZ_PYKF01000775.1	Protein Homology	CDS	677	1899	.	+	0	ID=cds-WP_146713288.1;Parent=gene-C9F04_RS24275;Dbxref=Genbank:WP_146713288.1;Name=WP_146713288.1;Ontology_term=GO:0006614,GO:0005525;end_range=1899,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9F04_RS24275;partial=true;product=signal recognition particle-docking protein FtsY;protein_id=WP_146713288.1;transl_table=11
##sequence-region NZ_PYKF01000203.1 1 1889
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000203.1	RefSeq	region	1	1889	.	+	.	ID=NZ_PYKF01000203.1:1..1889;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000203.1	RefSeq	gene	199	1548	.	-	.	ID=gene-C9F04_RS04810;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9F04_RS04810;old_locus_tag=C9F04_04975
NZ_PYKF01000203.1	Protein Homology	CDS	199	1548	.	-	0	ID=cds-WP_000953168.1;Parent=gene-C9F04_RS04810;Dbxref=Genbank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9F04_RS04810;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11
NZ_PYKF01000203.1	RefSeq	gene	1709	1889	.	+	.	ID=gene-C9F04_RS04815;Name=C9F04_RS04815;end_range=1889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04815;old_locus_tag=C9F04_04980;partial=true
NZ_PYKF01000203.1	Protein Homology	CDS	1709	1889	.	+	0	ID=cds-WP_186798998.1;Parent=gene-C9F04_RS04815;Dbxref=Genbank:WP_186798998.1;Name=WP_186798998.1;Ontology_term=GO:0003824;end_range=1889,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9F04_RS04815;partial=true;product=IMP dehydrogenase;protein_id=WP_186798998.1;transl_table=11
##sequence-region NZ_PYKF01000755.1 1 1871
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000755.1	RefSeq	region	1	1871	.	+	.	ID=NZ_PYKF01000755.1:1..1871;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000755.1	RefSeq	pseudogene	1	732	.	-	.	ID=gene-C9F04_RS23500;Name=C9F04_RS23500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23500;old_locus_tag=C9F04_24280;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000755.1	Protein Homology	CDS	1	732	.	-	0	ID=cds-C9F04_RS23500;Parent=gene-C9F04_RS23500;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9F04_RS23500;partial=true;product=glycerol-3-phosphate 1-O-acyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000755.1	RefSeq	gene	903	1271	.	+	.	ID=gene-C9F04_RS23505;Name=C9F04_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23505;old_locus_tag=C9F04_24285
NZ_PYKF01000755.1	Protein Homology	CDS	903	1271	.	+	0	ID=cds-WP_000002902.1;Parent=gene-C9F04_RS23505;Dbxref=Genbank:WP_000002902.1;Name=WP_000002902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9F04_RS23505;product=diacylglycerol kinase;protein_id=WP_000002902.1;transl_table=11
NZ_PYKF01000755.1	RefSeq	gene	1380	1871	.	+	.	ID=gene-C9F04_RS23510;Name=lexA;end_range=1871,.;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9F04_RS23510;old_locus_tag=C9F04_24290;partial=true
NZ_PYKF01000755.1	Protein Homology	CDS	1380	1871	.	+	0	ID=cds-WP_146713255.1;Parent=gene-C9F04_RS23510;Dbxref=Genbank:WP_146713255.1;Name=WP_146713255.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;end_range=1871,.;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9F04_RS23510;partial=true;product=transcriptional repressor LexA;protein_id=WP_146713255.1;transl_table=11
##sequence-region NZ_PYKF01000788.1 1 1845
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000788.1	RefSeq	region	1	1845	.	+	.	ID=NZ_PYKF01000788.1:1..1845;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000788.1	RefSeq	gene	1	516	.	+	.	ID=gene-C9F04_RS24610;Name=C9F04_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24610;old_locus_tag=C9F04_25450;partial=true;start_range=.,1
NZ_PYKF01000788.1	Protein Homology	CDS	1	516	.	+	0	ID=cds-WP_146713309.1;Parent=gene-C9F04_RS24610;Dbxref=Genbank:WP_146713309.1;Name=WP_146713309.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9F04_RS24610;partial=true;product=winged helix-turn-helix domain-containing protein;protein_id=WP_146713309.1;start_range=.,1;transl_table=11
NZ_PYKF01000788.1	RefSeq	gene	785	1845	.	+	.	ID=gene-C9F04_RS24615;Name=C9F04_RS24615;end_range=1845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24615;old_locus_tag=C9F04_25460;partial=true
NZ_PYKF01000788.1	Protein Homology	CDS	785	1845	.	+	0	ID=cds-WP_146713310.1;Parent=gene-C9F04_RS24615;Dbxref=Genbank:WP_146713310.1;Name=WP_146713310.1;end_range=1845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9F04_RS24615;partial=true;product=PcfJ domain-containing protein;protein_id=WP_146713310.1;transl_table=11
##sequence-region NZ_PYKF01000227.1 1 1835
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000227.1	RefSeq	region	1	1835	.	+	.	ID=NZ_PYKF01000227.1:1..1835;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000227.1	RefSeq	pseudogene	1	322	.	-	.	ID=gene-C9F04_RS05885;Name=C9F04_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05885;old_locus_tag=C9F04_06070;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000227.1	Protein Homology	CDS	1	322	.	-	0	ID=cds-C9F04_RS05885;Parent=gene-C9F04_RS05885;Note=GTP hydrolase involved in nickel liganding into hydrogenases%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9F04_RS05885;partial=true;product=hydrogenase nickel incorporation protein HypB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000227.1	RefSeq	gene	391	747	.	-	.	ID=gene-C9F04_RS05890;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F04_RS05890;old_locus_tag=C9F04_06075
NZ_PYKF01000227.1	Protein Homology	CDS	391	747	.	-	0	ID=cds-WP_000544461.1;Parent=gene-C9F04_RS05890;Dbxref=Genbank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9F04_RS05890;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11
NZ_PYKF01000227.1	RefSeq	gene	957	1418	.	+	.	ID=gene-C9F04_RS05895;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9F04_RS05895;old_locus_tag=C9F04_06085
NZ_PYKF01000227.1	Protein Homology	CDS	957	1418	.	+	0	ID=cds-WP_000158075.1;Parent=gene-C9F04_RS05895;Dbxref=Genbank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9F04_RS05895;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11
NZ_PYKF01000227.1	RefSeq	pseudogene	1564	1835	.	+	.	ID=gene-C9F04_RS05900;Name=hycB;end_range=1835,.;gbkey=Gene;gene=hycB;gene_biotype=pseudogene;locus_tag=C9F04_RS05900;old_locus_tag=C9F04_06090;partial=true;pseudo=true
NZ_PYKF01000227.1	Protein Homology	CDS	1564	1835	.	+	0	ID=cds-C9F04_RS05900;Parent=gene-C9F04_RS05900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1835,.;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9F04_RS05900;partial=true;product=formate hydrogenlyase subunit HycB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000463.1 1 1835
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000463.1	RefSeq	region	1	1835	.	+	.	ID=NZ_PYKF01000463.1:1..1835;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000463.1	RefSeq	gene	1	398	.	-	.	ID=gene-C9F04_RS13950;Name=C9F04_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13950;old_locus_tag=C9F04_14400;partial=true;start_range=.,1
NZ_PYKF01000463.1	Protein Homology	CDS	1	398	.	-	0	ID=cds-WP_146712778.1;Parent=gene-C9F04_RS13950;Dbxref=Genbank:WP_146712778.1;Name=WP_146712778.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9F04_RS13950;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_146712778.1;start_range=.,1;transl_table=11
NZ_PYKF01000463.1	RefSeq	gene	448	1389	.	-	.	ID=gene-C9F04_RS13955;Name=C9F04_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13955;old_locus_tag=C9F04_14405
NZ_PYKF01000463.1	Protein Homology	CDS	448	1389	.	-	0	ID=cds-WP_001032198.1;Parent=gene-C9F04_RS13955;Dbxref=Genbank:WP_001032198.1;Name=WP_001032198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9F04_RS13955;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032198.1;transl_table=11
NZ_PYKF01000463.1	RefSeq	gene	1405	1835	.	-	.	ID=gene-C9F04_RS13960;Name=fixA;end_range=1835,.;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=C9F04_RS13960;old_locus_tag=C9F04_14410;partial=true
NZ_PYKF01000463.1	Protein Homology	CDS	1405	1835	.	-	2	ID=cds-WP_146712779.1;Parent=gene-C9F04_RS13960;Dbxref=Genbank:WP_146712779.1;Name=WP_146712779.1;end_range=1835,.;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=C9F04_RS13960;partial=true;product=putative electron transfer flavoprotein FixA;protein_id=WP_146712779.1;transl_table=11
##sequence-region NZ_PYKF01000628.1 1 1812
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000628.1	RefSeq	region	1	1812	.	+	.	ID=NZ_PYKF01000628.1:1..1812;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000628.1	RefSeq	gene	1	1488	.	+	.	ID=gene-C9F04_RS19060;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9F04_RS19060;old_locus_tag=C9F04_19685;partial=true;start_range=.,1
NZ_PYKF01000628.1	Protein Homology	CDS	1	1488	.	+	0	ID=cds-WP_146713020.1;Parent=gene-C9F04_RS19060;Dbxref=Genbank:WP_146713020.1;Name=WP_146713020.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9F04_RS19060;partial=true;product=DNA topoisomerase IV subunit B;protein_id=WP_146713020.1;start_range=.,1;transl_table=11
NZ_PYKF01000628.1	RefSeq	gene	1613	1812	.	-	.	ID=gene-C9F04_RS19065;Name=C9F04_RS19065;end_range=1812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19065;old_locus_tag=C9F04_19690;partial=true
NZ_PYKF01000628.1	Protein Homology	CDS	1613	1812	.	-	2	ID=cds-WP_186799057.1;Parent=gene-C9F04_RS19065;Dbxref=Genbank:WP_186799057.1;Name=WP_186799057.1;end_range=1812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9F04_RS19065;partial=true;product=antibiotic biosynthesis monooxygenase;protein_id=WP_186799057.1;transl_table=11
##sequence-region NZ_PYKF01000359.1 1 1795
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000359.1	RefSeq	region	1	1795	.	+	.	ID=NZ_PYKF01000359.1:1..1795;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000359.1	RefSeq	gene	1	1795	.	-	.	ID=gene-C9F04_RS10585;Name=torS;end_range=1795,.;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=C9F04_RS10585;old_locus_tag=C9F04_10920;partial=true;start_range=.,1
NZ_PYKF01000359.1	Protein Homology	CDS	1	1795	.	-	0	ID=cds-WP_146712609.1;Parent=gene-C9F04_RS10585;Dbxref=Genbank:WP_146712609.1;Name=WP_146712609.1;end_range=1795,.;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F04_RS10585;partial=true;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_146712609.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000271.1 1 1785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000271.1	RefSeq	region	1	1785	.	+	.	ID=NZ_PYKF01000271.1:1..1785;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000271.1	RefSeq	gene	1	939	.	+	.	ID=gene-C9F04_RS07505;Name=C9F04_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07505;old_locus_tag=C9F04_07750;partial=true;start_range=.,1
NZ_PYKF01000271.1	Protein Homology	CDS	1	939	.	+	0	ID=cds-WP_146712475.1;Parent=gene-C9F04_RS07505;Dbxref=Genbank:WP_146712475.1;Name=WP_146712475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9F04_RS07505;partial=true;product=mechanosensitive ion channel family protein;protein_id=WP_146712475.1;start_range=.,1;transl_table=11
NZ_PYKF01000271.1	RefSeq	gene	981	1785	.	-	.	ID=gene-C9F04_RS07510;Name=C9F04_RS07510;end_range=1785,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07510;old_locus_tag=C9F04_07755;partial=true
NZ_PYKF01000271.1	Protein Homology	CDS	981	1785	.	-	1	ID=cds-WP_146712476.1;Parent=gene-C9F04_RS07510;Dbxref=Genbank:WP_146712476.1;Name=WP_146712476.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1785,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9F04_RS07510;partial=true;product=amino acid permease;protein_id=WP_146712476.1;transl_table=11
##sequence-region NZ_PYKF01000133.1 1 1780
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000133.1	RefSeq	region	1	1780	.	+	.	ID=NZ_PYKF01000133.1:1..1780;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000133.1	RefSeq	gene	71	766	.	+	.	ID=gene-C9F04_RS02700;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=C9F04_RS02700;old_locus_tag=C9F04_02795
NZ_PYKF01000133.1	Protein Homology	CDS	71	766	.	+	0	ID=cds-WP_031605712.1;Parent=gene-C9F04_RS02700;Dbxref=Genbank:WP_031605712.1;Name=WP_031605712.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=C9F04_RS02700;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_031605712.1;transl_table=11
NZ_PYKF01000133.1	RefSeq	gene	750	1655	.	+	.	ID=gene-C9F04_RS02705;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=C9F04_RS02705;old_locus_tag=C9F04_02800
NZ_PYKF01000133.1	Protein Homology	CDS	750	1655	.	+	0	ID=cds-WP_031605711.1;Parent=gene-C9F04_RS02705;Dbxref=Genbank:WP_031605711.1;Name=WP_031605711.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907525.1;locus_tag=C9F04_RS02705;product=allose kinase;protein_id=WP_031605711.1;transl_table=11
##sequence-region NZ_PYKF01000803.1 1 16866
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000803.1	RefSeq	region	1	16866	.	+	.	ID=NZ_PYKF01000803.1:1..16866;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000803.1	RefSeq	gene	1	341	.	+	.	ID=gene-C9F04_RS25025;Name=C9F04_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25025;old_locus_tag=C9F04_25885;partial=true;start_range=.,1
NZ_PYKF01000803.1	Protein Homology	CDS	1	341	.	+	2	ID=cds-WP_186799098.1;Parent=gene-C9F04_RS25025;Dbxref=Genbank:WP_186799098.1;Name=WP_186799098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9F04_RS25025;partial=true;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_186799098.1;start_range=.,1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	657	1988	.	+	.	ID=gene-C9F04_RS25030;Name=C9F04_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25030;old_locus_tag=C9F04_25890
NZ_PYKF01000803.1	Protein Homology	CDS	657	1988	.	+	0	ID=cds-WP_146713332.1;Parent=gene-C9F04_RS25030;Dbxref=Genbank:WP_146713332.1;Name=WP_146713332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9F04_RS25030;product=amino acid permease;protein_id=WP_146713332.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	2014	3324	.	+	.	ID=gene-C9F04_RS25035;Name=C9F04_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25035;old_locus_tag=C9F04_25895
NZ_PYKF01000803.1	Protein Homology	CDS	2014	3324	.	+	0	ID=cds-WP_000463070.1;Parent=gene-C9F04_RS25035;Dbxref=Genbank:WP_000463070.1;Name=WP_000463070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9F04_RS25035;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463070.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	3437	3601	.	-	.	ID=gene-C9F04_RS25040;Name=C9F04_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25040;old_locus_tag=C9F04_25900
NZ_PYKF01000803.1	Protein Homology	CDS	3437	3601	.	-	0	ID=cds-WP_000039326.1;Parent=gene-C9F04_RS25040;Dbxref=Genbank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9F04_RS25040;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	3625	4326	.	-	.	ID=gene-C9F04_RS25045;Name=C9F04_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25045;old_locus_tag=C9F04_25905
NZ_PYKF01000803.1	Protein Homology	CDS	3625	4326	.	-	0	ID=cds-WP_050067911.1;Parent=gene-C9F04_RS25045;Dbxref=Genbank:WP_050067911.1;Name=WP_050067911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9F04_RS25045;product=pirin family protein;protein_id=WP_050067911.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	4431	5327	.	+	.	ID=gene-C9F04_RS25050;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9F04_RS25050;old_locus_tag=C9F04_25910
NZ_PYKF01000803.1	Protein Homology	CDS	4431	5327	.	+	0	ID=cds-WP_146713333.1;Parent=gene-C9F04_RS25050;Dbxref=Genbank:WP_146713333.1;Name=WP_146713333.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9F04_RS25050;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_146713333.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	5366	5731	.	-	.	ID=gene-C9F04_RS25055;Name=C9F04_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25055;old_locus_tag=C9F04_25915
NZ_PYKF01000803.1	Protein Homology	CDS	5366	5731	.	-	0	ID=cds-WP_000384139.1;Parent=gene-C9F04_RS25055;Dbxref=Genbank:WP_000384139.1;Name=WP_000384139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9F04_RS25055;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	5855	6841	.	-	.	ID=gene-C9F04_RS25060;Name=C9F04_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25060;old_locus_tag=C9F04_25920
NZ_PYKF01000803.1	Protein Homology	CDS	5855	6841	.	-	0	ID=cds-WP_000531163.1;Parent=gene-C9F04_RS25060;Dbxref=Genbank:WP_000531163.1;Name=WP_000531163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9F04_RS25060;product=glutathione S-transferase family protein;protein_id=WP_000531163.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	6909	7301	.	-	.	ID=gene-C9F04_RS25065;Name=C9F04_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25065;old_locus_tag=C9F04_25925
NZ_PYKF01000803.1	Protein Homology	CDS	6909	7301	.	-	0	ID=cds-WP_001592732.1;Parent=gene-C9F04_RS25065;Dbxref=Genbank:WP_001592732.1;Name=WP_001592732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9F04_RS25065;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	7539	7838	.	-	.	ID=gene-C9F04_RS25070;Name=C9F04_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25070;old_locus_tag=C9F04_25930
NZ_PYKF01000803.1	Protein Homology	CDS	7539	7838	.	-	0	ID=cds-WP_000095496.1;Parent=gene-C9F04_RS25070;Dbxref=Genbank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9F04_RS25070;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	7835	8233	.	-	.	ID=gene-C9F04_RS25075;Name=C9F04_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25075;old_locus_tag=C9F04_25935
NZ_PYKF01000803.1	Protein Homology	CDS	7835	8233	.	-	0	ID=cds-WP_000785623.1;Parent=gene-C9F04_RS25075;Dbxref=Genbank:WP_000785623.1;Name=WP_000785623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9F04_RS25075;product=phage holin family protein;protein_id=WP_000785623.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	8236	8541	.	-	.	ID=gene-C9F04_RS25080;Name=C9F04_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25080;old_locus_tag=C9F04_25940
NZ_PYKF01000803.1	Protein Homology	CDS	8236	8541	.	-	0	ID=cds-WP_000031219.1;Parent=gene-C9F04_RS25080;Dbxref=Genbank:WP_000031219.1;Name=WP_000031219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9F04_RS25080;product=YqjD family protein;protein_id=WP_000031219.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	8583	8951	.	-	.	ID=gene-C9F04_RS25085;Name=C9F04_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25085;old_locus_tag=C9F04_25945
NZ_PYKF01000803.1	Protein Homology	CDS	8583	8951	.	-	0	ID=cds-WP_000877297.1;Parent=gene-C9F04_RS25085;Dbxref=Genbank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9F04_RS25085;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	9096	9479	.	-	.	ID=gene-C9F04_RS25090;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9F04_RS25090;old_locus_tag=C9F04_25950
NZ_PYKF01000803.1	Protein Homology	CDS	9096	9479	.	-	0	ID=cds-WP_000917516.1;Parent=gene-C9F04_RS25090;Dbxref=Genbank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9F04_RS25090;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	9483	10145	.	-	.	ID=gene-C9F04_RS25095;Name=C9F04_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25095;old_locus_tag=C9F04_25955
NZ_PYKF01000803.1	Protein Homology	CDS	9483	10145	.	-	0	ID=cds-WP_000422143.1;Parent=gene-C9F04_RS25095;Dbxref=Genbank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9F04_RS25095;product=DedA family protein;protein_id=WP_000422143.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	10595	11839	.	-	.	ID=gene-C9F04_RS25100;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9F04_RS25100;old_locus_tag=C9F04_25965
NZ_PYKF01000803.1	Protein Homology	CDS	10595	11839	.	-	0	ID=cds-WP_000235363.1;Parent=gene-C9F04_RS25100;Dbxref=Genbank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016021;gbkey=CDS;gene=sstT;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9F04_RS25100;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	12094	13062	.	-	.	ID=gene-C9F04_RS25105;Name=C9F04_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25105;old_locus_tag=C9F04_25970
NZ_PYKF01000803.1	Protein Homology	CDS	12094	13062	.	-	0	ID=cds-WP_001098837.1;Parent=gene-C9F04_RS25105;Dbxref=Genbank:WP_001098837.1;Name=WP_001098837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9F04_RS25105;product=TerC family protein;protein_id=WP_001098837.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	13333	14331	.	-	.	ID=gene-C9F04_RS25110;Name=C9F04_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25110;old_locus_tag=C9F04_25975
NZ_PYKF01000803.1	Protein Homology	CDS	13333	14331	.	-	0	ID=cds-WP_064047046.1;Parent=gene-C9F04_RS25110;Dbxref=Genbank:WP_064047046.1;Name=WP_064047046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9F04_RS25110;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_064047046.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	14420	15112	.	-	.	ID=gene-C9F04_RS25115;Name=C9F04_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25115;old_locus_tag=C9F04_25980
NZ_PYKF01000803.1	Protein Homology	CDS	14420	15112	.	-	0	ID=cds-WP_000951045.1;Parent=gene-C9F04_RS25115;Dbxref=Genbank:WP_000951045.1;Name=WP_000951045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9F04_RS25115;product=vancomycin high temperature exclusion protein;protein_id=WP_000951045.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	15264	15761	.	-	.	ID=gene-C9F04_RS25120;Name=C9F04_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25120;old_locus_tag=C9F04_25985
NZ_PYKF01000803.1	Protein Homology	CDS	15264	15761	.	-	0	ID=cds-WP_000202966.1;Parent=gene-C9F04_RS25120;Dbxref=Genbank:WP_000202966.1;Name=WP_000202966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9F04_RS25120;product=M48 family metallopeptidase;protein_id=WP_000202966.1;transl_table=11
NZ_PYKF01000803.1	RefSeq	gene	15847	16866	.	+	.	ID=gene-C9F04_RS25125;Name=rlmG;end_range=16866,.;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9F04_RS25125;old_locus_tag=C9F04_25990;partial=true
NZ_PYKF01000803.1	Protein Homology	CDS	15847	16866	.	+	0	ID=cds-WP_146713334.1;Parent=gene-C9F04_RS25125;Dbxref=Genbank:WP_146713334.1;Name=WP_146713334.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;end_range=16866,.;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9F04_RS25125;partial=true;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_146713334.1;transl_table=11
##sequence-region NZ_PYKF01000838.1 1 1768
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000838.1	RefSeq	region	1	1768	.	+	.	ID=NZ_PYKF01000838.1:1..1768;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000838.1	RefSeq	pseudogene	1	762	.	-	.	ID=gene-C9F04_RS26335;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=pseudogene;locus_tag=C9F04_RS26335;old_locus_tag=C9F04_27255;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000838.1	Protein Homology	CDS	1	762	.	-	0	ID=cds-C9F04_RS26335;Parent=gene-C9F04_RS26335;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9F04_RS26335;partial=true;product=beta-barrel assembly-enhancing protease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000838.1	RefSeq	pseudogene	970	1768	.	+	.	ID=gene-C9F04_RS26340;Name=C9F04_RS26340;end_range=1768,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26340;old_locus_tag=C9F04_27260;partial=true;pseudo=true
NZ_PYKF01000838.1	Protein Homology	CDS	970	1768	.	+	0	ID=cds-C9F04_RS26340;Parent=gene-C9F04_RS26340;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=1768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9F04_RS26340;partial=true;product=AI-2E family transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000689.1 1 1758
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000689.1	RefSeq	region	1	1758	.	+	.	ID=NZ_PYKF01000689.1:1..1758;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000689.1	RefSeq	gene	1	719	.	-	.	ID=gene-C9F04_RS21230;Name=C9F04_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21230;old_locus_tag=C9F04_21920;partial=true;start_range=.,1
NZ_PYKF01000689.1	Protein Homology	CDS	1	719	.	-	0	ID=cds-WP_080198306.1;Parent=gene-C9F04_RS21230;Dbxref=Genbank:WP_080198306.1;Name=WP_080198306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9F04_RS21230;partial=true;product=insulinase family protein;protein_id=WP_080198306.1;start_range=.,1;transl_table=11
NZ_PYKF01000689.1	RefSeq	pseudogene	897	1758	.	-	.	ID=gene-C9F04_RS21235;Name=recC;end_range=1758,.;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=C9F04_RS21235;old_locus_tag=C9F04_21925;partial=true;pseudo=true
NZ_PYKF01000689.1	Protein Homology	CDS	897	1758	.	-	1	ID=cds-C9F04_RS21235;Parent=gene-C9F04_RS21235;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1758,.;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9F04_RS21235;partial=true;product=exonuclease V subunit gamma;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000657.1 1 1749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000657.1	RefSeq	region	1	1749	.	+	.	ID=NZ_PYKF01000657.1:1..1749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000657.1	RefSeq	gene	25	1749	.	-	.	ID=gene-C9F04_RS20130;Name=C9F04_RS20130;end_range=1749,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS20130;old_locus_tag=C9F04_20790;partial=true
NZ_PYKF01000657.1	cmsearch	rRNA	25	1749	.	-	.	ID=rna-C9F04_RS20130;Parent=gene-C9F04_RS20130;Dbxref=RFAM:RF02541;end_range=1749,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20130;partial=true;product=23S ribosomal RNA
NZ_PYKF01000657.1	cmsearch	exon	25	1749	.	-	.	ID=exon-C9F04_RS20130-1;Parent=rna-C9F04_RS20130;Dbxref=RFAM:RF02541;end_range=1749,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS20130;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PYKF01000173.1 1 1749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000173.1	RefSeq	region	1	1749	.	+	.	ID=NZ_PYKF01000173.1:1..1749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000173.1	RefSeq	gene	425	1243	.	+	.	ID=gene-C9F04_RS03805;Name=C9F04_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03805;old_locus_tag=C9F04_03930
NZ_PYKF01000173.1	Protein Homology	CDS	425	1243	.	+	0	ID=cds-WP_135369607.1;Parent=gene-C9F04_RS03805;Dbxref=Genbank:WP_135369607.1;Name=WP_135369607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=C9F04_RS03805;product=hypothetical protein;protein_id=WP_135369607.1;transl_table=11
NZ_PYKF01000173.1	RefSeq	pseudogene	1503	1634	.	-	.	ID=gene-C9F04_RS03810;Name=C9F04_RS03810;end_range=1634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03810;old_locus_tag=C9F04_03935;partial=true;pseudo=true;start_range=.,1503
NZ_PYKF01000173.1	Protein Homology	CDS	1503	1634	.	-	0	ID=cds-C9F04_RS03810;Parent=gene-C9F04_RS03810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=C9F04_RS03810;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1503;transl_table=11
##sequence-region NZ_PYKF01000712.1 1 1745
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000712.1	RefSeq	region	1	1745	.	+	.	ID=NZ_PYKF01000712.1:1..1745;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000712.1	RefSeq	gene	1	362	.	-	.	ID=gene-C9F04_RS22095;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=C9F04_RS22095;old_locus_tag=C9F04_22830;partial=true;start_range=.,1
NZ_PYKF01000712.1	Protein Homology	CDS	1	362	.	-	0	ID=cds-WP_146713181.1;Parent=gene-C9F04_RS22095;Dbxref=Genbank:WP_146713181.1;Name=WP_146713181.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820433.1;locus_tag=C9F04_RS22095;partial=true;product=flagellar protein FlhE;protein_id=WP_146713181.1;start_range=.,1;transl_table=11
NZ_PYKF01000712.1	RefSeq	gene	362	1745	.	-	.	ID=gene-C9F04_RS22100;Name=C9F04_RS22100;end_range=1745,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22100;old_locus_tag=C9F04_22835;partial=true
NZ_PYKF01000712.1	Protein Homology	CDS	362	1745	.	-	1	ID=cds-WP_186799076.1;Parent=gene-C9F04_RS22100;Dbxref=Genbank:WP_186799076.1;Name=WP_186799076.1;Ontology_term=GO:0009306,GO:0016020;end_range=1745,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9F04_RS22100;partial=true;product=FHIPEP family type III secretion protein;protein_id=WP_186799076.1;transl_table=11
##sequence-region NZ_PYKF01000410.1 1 1742
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000410.1	RefSeq	region	1	1742	.	+	.	ID=NZ_PYKF01000410.1:1..1742;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000410.1	RefSeq	pseudogene	1	872	.	+	.	ID=gene-C9F04_RS12155;Name=C9F04_RS12155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12155;old_locus_tag=C9F04_12570;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000410.1	Protein Homology	CDS	1	872	.	+	2	ID=cds-C9F04_RS12155;Parent=gene-C9F04_RS12155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166955.1;locus_tag=C9F04_RS12155;partial=true;product=inositol phosphate phosphatase SopB;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000410.1	RefSeq	gene	889	1230	.	+	.	ID=gene-C9F04_RS12160;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9F04_RS12160;old_locus_tag=C9F04_12575
NZ_PYKF01000410.1	Protein Homology	CDS	889	1230	.	+	0	ID=cds-WP_047607139.1;Parent=gene-C9F04_RS12160;Dbxref=Genbank:WP_047607139.1;Name=WP_047607139.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9F04_RS12160;product=type III secretion system chaperone SigE;protein_id=WP_047607139.1;transl_table=11
NZ_PYKF01000410.1	RefSeq	gene	1221	1559	.	-	.	ID=gene-C9F04_RS12165;Name=C9F04_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12165;old_locus_tag=C9F04_12580
NZ_PYKF01000410.1	Protein Homology	CDS	1221	1559	.	-	0	ID=cds-WP_135420319.1;Parent=gene-C9F04_RS12165;Dbxref=Genbank:WP_135420319.1;Name=WP_135420319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9F04_RS12165;product=hypothetical protein;protein_id=WP_135420319.1;transl_table=11
NZ_PYKF01000410.1	RefSeq	gene	1595	1742	.	+	.	ID=gene-C9F04_RS26615;Name=C9F04_RS26615;end_range=1742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26615;partial=true
NZ_PYKF01000410.1	Protein Homology	CDS	1595	1742	.	+	0	ID=cds-WP_261771000.1;Parent=gene-C9F04_RS26615;Dbxref=Genbank:WP_261771000.1;Name=WP_261771000.1;end_range=1742,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.2;locus_tag=C9F04_RS26615;partial=true;product=PagK family vesicle-borne virulence factor;protein_id=WP_261771000.1;transl_table=11
##sequence-region NZ_PYKF01000228.1 1 1741
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000228.1	RefSeq	region	1	1741	.	+	.	ID=NZ_PYKF01000228.1:1..1741;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000228.1	RefSeq	gene	152	1609	.	+	.	ID=gene-C9F04_RS05905;Name=C9F04_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05905;old_locus_tag=C9F04_06095
NZ_PYKF01000228.1	Protein Homology	CDS	152	1609	.	+	0	ID=cds-WP_001669456.1;Parent=gene-C9F04_RS05905;Dbxref=Genbank:WP_001669456.1;Name=WP_001669456.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9F04_RS05905;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001669456.1;transl_table=11
##sequence-region NZ_PYKF01000231.1 1 1734
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000231.1	RefSeq	region	1	1734	.	+	.	ID=NZ_PYKF01000231.1:1..1734;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000231.1	RefSeq	pseudogene	1	123	.	-	.	ID=gene-C9F04_RS06020;Name=C9F04_RS06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06020;old_locus_tag=C9F04_06210;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000231.1	Protein Homology	CDS	1	123	.	-	0	ID=cds-C9F04_RS06020;Parent=gene-C9F04_RS06020;Note=rotamase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=C9F04_RS06020;partial=true;product=peptidylprolyl isomerase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000231.1	RefSeq	gene	218	418	.	-	.	ID=gene-C9F04_RS06025;Name=C9F04_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06025;old_locus_tag=C9F04_06215
NZ_PYKF01000231.1	Protein Homology	CDS	218	418	.	-	0	ID=cds-WP_001007735.1;Parent=gene-C9F04_RS06025;Dbxref=Genbank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9F04_RS06025;product=YheV family putative metal-binding protein;protein_id=WP_001007735.1;transl_table=11
NZ_PYKF01000231.1	RefSeq	gene	429	1734	.	-	.	ID=gene-C9F04_RS06030;Name=kefB;end_range=1734,.;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9F04_RS06030;old_locus_tag=C9F04_06220;partial=true
NZ_PYKF01000231.1	Protein Homology	CDS	429	1734	.	-	1	ID=cds-WP_146712412.1;Parent=gene-C9F04_RS06030;Dbxref=Genbank:WP_146712412.1;Name=WP_146712412.1;Ontology_term=GO:0006813,GO:0015503;end_range=1734,.;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F04_RS06030;partial=true;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_146712412.1;transl_table=11
##sequence-region NZ_PYKF01000385.1 1 1715
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000385.1	RefSeq	region	1	1715	.	+	.	ID=NZ_PYKF01000385.1:1..1715;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000385.1	RefSeq	gene	1	370	.	+	.	ID=gene-C9F04_RS11350;Name=C9F04_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11350;old_locus_tag=C9F04_11725;partial=true;start_range=.,1
NZ_PYKF01000385.1	Protein Homology	CDS	1	370	.	+	1	ID=cds-WP_146712649.1;Parent=gene-C9F04_RS11350;Dbxref=Genbank:WP_146712649.1;Name=WP_146712649.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9F04_RS11350;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_146712649.1;start_range=.,1;transl_table=11
NZ_PYKF01000385.1	RefSeq	gene	462	1217	.	-	.	ID=gene-C9F04_RS11355;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9F04_RS11355;old_locus_tag=C9F04_11730
NZ_PYKF01000385.1	Protein Homology	CDS	462	1217	.	-	0	ID=cds-WP_167850430.1;Parent=gene-C9F04_RS11355;Dbxref=Genbank:WP_167850430.1;Name=WP_167850430.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9F04_RS11355;product=flap endonuclease Xni;protein_id=WP_167850430.1;transl_table=11
NZ_PYKF01000385.1	RefSeq	pseudogene	1388	1654	.	-	.	ID=gene-C9F04_RS11360;Name=C9F04_RS11360;end_range=1654,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11360;old_locus_tag=C9F04_11740;partial=true;pseudo=true
NZ_PYKF01000385.1	Protein Homology	CDS	1388	1654	.	-	0	ID=cds-C9F04_RS11360;Parent=gene-C9F04_RS11360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1654,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9F04_RS11360;partial=true;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000018.1 1 1713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000018.1	RefSeq	region	1	1713	.	+	.	ID=NZ_PYKF01000018.1:1..1713;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000018.1	RefSeq	gene	1	959	.	-	.	ID=gene-C9F04_RS00205;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9F04_RS00205;old_locus_tag=C9F04_00220;partial=true;start_range=.,1
NZ_PYKF01000018.1	Protein Homology	CDS	1	959	.	-	0	ID=cds-WP_146712133.1;Parent=gene-C9F04_RS00205;Dbxref=Genbank:WP_146712133.1;Name=WP_146712133.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9F04_RS00205;partial=true;product=HTH-type transcriptional repressor PurR;protein_id=WP_146712133.1;start_range=.,1;transl_table=11
NZ_PYKF01000018.1	RefSeq	gene	1255	1344	.	+	.	ID=gene-C9F04_RS00210;Name=C9F04_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00210;old_locus_tag=C9F04_00230
NZ_PYKF01000018.1	Protein Homology	CDS	1255	1344	.	+	0	ID=cds-WP_000102277.1;Parent=gene-C9F04_RS00210;Dbxref=Genbank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9F04_RS00210;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11
NZ_PYKF01000018.1	RefSeq	pseudogene	1427	1713	.	-	.	ID=gene-C9F04_RS00215;Name=C9F04_RS00215;end_range=1713,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00215;old_locus_tag=C9F04_00235;partial=true;pseudo=true
NZ_PYKF01000018.1	Protein Homology	CDS	1427	1713	.	-	2	ID=cds-C9F04_RS00215;Parent=gene-C9F04_RS00215;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1713,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9F04_RS00215;partial=true;product=superoxide dismutase [Fe];pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000252.1 1 16672
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000252.1	RefSeq	region	1	16672	.	+	.	ID=NZ_PYKF01000252.1:1..16672;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000252.1	RefSeq	pseudogene	1	104	.	+	.	ID=gene-C9F04_RS06880;Name=C9F04_RS06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06880;old_locus_tag=C9F04_07105;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000252.1	Protein Homology	CDS	1	104	.	+	2	ID=cds-C9F04_RS06880;Parent=gene-C9F04_RS06880;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9F04_RS06880;partial=true;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	115	1464	.	+	.	ID=gene-C9F04_RS06885;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9F04_RS06885;old_locus_tag=C9F04_07110
NZ_PYKF01000252.1	Protein Homology	CDS	115	1464	.	+	0	ID=cds-WP_146712445.1;Parent=gene-C9F04_RS06885;Dbxref=Genbank:WP_146712445.1;Name=WP_146712445.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9F04_RS06885;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_146712445.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	1573	1815	.	+	.	ID=gene-C9F04_RS06890;Name=C9F04_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06890;old_locus_tag=C9F04_07115
NZ_PYKF01000252.1	Protein Homology	CDS	1573	1815	.	+	0	ID=cds-WP_000340018.1;Parent=gene-C9F04_RS06890;Dbxref=Genbank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9F04_RS06890;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	1805	3256	.	+	.	ID=gene-C9F04_RS06895;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F04_RS06895;old_locus_tag=C9F04_07120
NZ_PYKF01000252.1	Protein Homology	CDS	1805	3256	.	+	0	ID=cds-WP_001175681.1;Parent=gene-C9F04_RS06895;Dbxref=Genbank:WP_001175681.1;Name=WP_001175681.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9F04_RS06895;product=sodium/pantothenate symporter;protein_id=WP_001175681.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	3268	4149	.	+	.	ID=gene-C9F04_RS06900;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9F04_RS06900;old_locus_tag=C9F04_07125
NZ_PYKF01000252.1	Protein Homology	CDS	3268	4149	.	+	0	ID=cds-WP_001145849.1;Parent=gene-C9F04_RS06900;Dbxref=Genbank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9F04_RS06900;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	pseudogene	4361	4543	.	+	.	ID=gene-C9F04_RS26760;Name=C9F04_RS26760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26760;partial=true;pseudo=true;start_range=.,4361
NZ_PYKF01000252.1	Protein Homology	CDS	4361	4543	.	+	0	ID=cds-C9F04_RS26760;Parent=gene-C9F04_RS26760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012420.2;locus_tag=C9F04_RS26760;partial=true;product=carbonic anhydrase family protein;pseudo=true;start_range=.,4361;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	4810	5775	.	+	.	ID=gene-C9F04_RS06910;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9F04_RS06910;old_locus_tag=C9F04_07130
NZ_PYKF01000252.1	Protein Homology	CDS	4810	5775	.	+	0	ID=cds-WP_001219664.1;Parent=gene-C9F04_RS06910;Dbxref=Genbank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9F04_RS06910;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	5801	6097	.	+	.	ID=gene-C9F04_RS06915;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9F04_RS06915;old_locus_tag=C9F04_07135
NZ_PYKF01000252.1	Protein Homology	CDS	5801	6097	.	+	0	ID=cds-WP_000462905.1;Parent=gene-C9F04_RS06915;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9F04_RS06915;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	6183	7067	.	+	.	ID=gene-C9F04_RS06920;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9F04_RS06920;old_locus_tag=C9F04_07140
NZ_PYKF01000252.1	Protein Homology	CDS	6183	7067	.	+	0	ID=cds-WP_000642611.1;Parent=gene-C9F04_RS06920;Dbxref=Genbank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9F04_RS06920;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	7150	7314	.	+	.	ID=gene-C9F04_RS06925;Name=C9F04_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06925;old_locus_tag=C9F04_07145
NZ_PYKF01000252.1	Protein Homology	CDS	7150	7314	.	+	0	ID=cds-WP_000620015.1;Parent=gene-C9F04_RS06925;Dbxref=Genbank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9F04_RS06925;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	7465	9564	.	+	.	ID=gene-C9F04_RS06930;Name=C9F04_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06930;old_locus_tag=C9F04_07150
NZ_PYKF01000252.1	Protein Homology	CDS	7465	9564	.	+	0	ID=cds-WP_146712446.1;Parent=gene-C9F04_RS06930;Dbxref=Genbank:WP_146712446.1;Name=WP_146712446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F04_RS06930;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_146712446.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	9567	10229	.	-	.	ID=gene-C9F04_RS06935;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9F04_RS06935;old_locus_tag=C9F04_07155
NZ_PYKF01000252.1	Protein Homology	CDS	9567	10229	.	-	0	ID=cds-WP_001085725.1;Parent=gene-C9F04_RS06935;Dbxref=Genbank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9F04_RS06935;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	10643	11800	.	+	.	ID=gene-C9F04_RS06940;Name=C9F04_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06940;old_locus_tag=C9F04_07160
NZ_PYKF01000252.1	Protein Homology	CDS	10643	11800	.	+	0	ID=cds-WP_146712447.1;Parent=gene-C9F04_RS06940;Dbxref=Genbank:WP_146712447.1;Name=WP_146712447.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F04_RS06940;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_146712447.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	11812	14925	.	+	.	ID=gene-C9F04_RS06945;Name=C9F04_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06945;old_locus_tag=C9F04_07165
NZ_PYKF01000252.1	Protein Homology	CDS	11812	14925	.	+	0	ID=cds-WP_146712448.1;Parent=gene-C9F04_RS06945;Dbxref=Genbank:WP_146712448.1;Name=WP_146712448.1;Ontology_term=GO:0006810,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9F04_RS06945;product=efflux RND transporter permease subunit;protein_id=WP_146712448.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	15162	15383	.	+	.	ID=gene-C9F04_RS06950;Name=C9F04_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06950;old_locus_tag=C9F04_07170
NZ_PYKF01000252.1	Protein Homology	CDS	15162	15383	.	+	0	ID=cds-WP_000825645.1;Parent=gene-C9F04_RS06950;Dbxref=Genbank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9F04_RS06950;product=membrane protein;protein_id=WP_000825645.1;transl_table=11
NZ_PYKF01000252.1	RefSeq	gene	16166	16281	.	-	.	ID=gene-C9F04_RS06960;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F04_RS06960;old_locus_tag=C9F04_07175
NZ_PYKF01000252.1	cmsearch	rRNA	16166	16281	.	-	.	ID=rna-C9F04_RS06960;Parent=gene-C9F04_RS06960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS06960;product=5S ribosomal RNA
NZ_PYKF01000252.1	cmsearch	exon	16166	16281	.	-	.	ID=exon-C9F04_RS06960-1;Parent=rna-C9F04_RS06960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS06960;product=5S ribosomal RNA
NZ_PYKF01000252.1	RefSeq	gene	16321	16396	.	-	.	ID=gene-C9F04_RS06965;Name=C9F04_RS06965;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS06965;old_locus_tag=C9F04_07180
NZ_PYKF01000252.1	tRNAscan-SE	tRNA	16321	16396	.	-	.	ID=rna-C9F04_RS06965;Parent=gene-C9F04_RS06965;anticodon=(pos:complement(16361..16363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS06965;product=tRNA-Thr
NZ_PYKF01000252.1	tRNAscan-SE	exon	16321	16396	.	-	.	ID=exon-C9F04_RS06965-1;Parent=rna-C9F04_RS06965;anticodon=(pos:complement(16361..16363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS06965;product=tRNA-Thr
NZ_PYKF01000252.1	RefSeq	gene	16411	16526	.	-	.	ID=gene-C9F04_RS06970;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F04_RS06970;old_locus_tag=C9F04_07185
NZ_PYKF01000252.1	cmsearch	rRNA	16411	16526	.	-	.	ID=rna-C9F04_RS06970;Parent=gene-C9F04_RS06970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS06970;product=5S ribosomal RNA
NZ_PYKF01000252.1	cmsearch	exon	16411	16526	.	-	.	ID=exon-C9F04_RS06970-1;Parent=rna-C9F04_RS06970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS06970;product=5S ribosomal RNA
##sequence-region NZ_PYKF01000078.1 1 1708
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000078.1	RefSeq	region	1	1708	.	+	.	ID=NZ_PYKF01000078.1:1..1708;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000078.1	RefSeq	gene	1	886	.	-	.	ID=gene-C9F04_RS01580;Name=C9F04_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01580;old_locus_tag=C9F04_01650;partial=true;start_range=.,1
NZ_PYKF01000078.1	Protein Homology	CDS	1	886	.	-	0	ID=cds-WP_186798978.1;Parent=gene-C9F04_RS01580;Dbxref=Genbank:WP_186798978.1;Name=WP_186798978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F04_RS01580;partial=true;product=penicillin-binding protein activator;protein_id=WP_186798978.1;start_range=.,1;transl_table=11
NZ_PYKF01000078.1	RefSeq	gene	950	1708	.	+	.	ID=gene-C9F04_RS01585;Name=rsmI;end_range=1708,.;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9F04_RS01585;old_locus_tag=C9F04_01655;partial=true
NZ_PYKF01000078.1	Protein Homology	CDS	950	1708	.	+	0	ID=cds-WP_146712197.1;Parent=gene-C9F04_RS01585;Dbxref=Genbank:WP_146712197.1;Name=WP_146712197.1;Ontology_term=GO:0008168;end_range=1708,.;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9F04_RS01585;partial=true;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_146712197.1;transl_table=11
##sequence-region NZ_PYKF01000546.1 1 1701
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000546.1	RefSeq	region	1	1701	.	+	.	ID=NZ_PYKF01000546.1:1..1701;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000546.1	RefSeq	pseudogene	38	448	.	+	.	ID=gene-C9F04_RS16290;Name=C9F04_RS16290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16290;old_locus_tag=C9F04_16790;partial=true;pseudo=true;start_range=.,38
NZ_PYKF01000546.1	Protein Homology	CDS	38	448	.	+	0	ID=cds-C9F04_RS16290;Parent=gene-C9F04_RS16290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9F04_RS16290;partial=true;product=glutathione binding-like protein;pseudo=true;start_range=.,38;transl_table=11
NZ_PYKF01000546.1	RefSeq	gene	574	1467	.	+	.	ID=gene-C9F04_RS16295;Name=C9F04_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16295;old_locus_tag=C9F04_16795
NZ_PYKF01000546.1	Protein Homology	CDS	574	1467	.	+	0	ID=cds-WP_001166274.1;Parent=gene-C9F04_RS16295;Dbxref=Genbank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9F04_RS16295;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11
NZ_PYKF01000546.1	RefSeq	pseudogene	1519	1701	.	-	.	ID=gene-C9F04_RS27135;Name=C9F04_RS27135;end_range=1701,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27135;partial=true;pseudo=true
NZ_PYKF01000546.1	Protein Homology	CDS	1519	1701	.	-	0	ID=cds-C9F04_RS27135;Parent=gene-C9F04_RS27135;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=1701,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129511.1;locus_tag=C9F04_RS27135;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000302.1 1 1694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000302.1	RefSeq	region	1	1694	.	+	.	ID=NZ_PYKF01000302.1:1..1694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000302.1	RefSeq	pseudogene	58	762	.	-	.	ID=gene-C9F04_RS08920;Name=C9F04_RS08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08920;old_locus_tag=C9F04_09215;partial=true;pseudo=true;start_range=.,58
NZ_PYKF01000302.1	Protein Homology	CDS	58	762	.	-	0	ID=cds-C9F04_RS08920;Parent=gene-C9F04_RS08920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F04_RS08920;partial=true;product=carboxylesterase family protein;pseudo=true;start_range=.,58;transl_table=11
NZ_PYKF01000302.1	RefSeq	gene	811	1694	.	-	.	ID=gene-C9F04_RS08925;Name=C9F04_RS08925;end_range=1694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08925;old_locus_tag=C9F04_09220;partial=true
NZ_PYKF01000302.1	Protein Homology	CDS	811	1694	.	-	2	ID=cds-WP_146712518.1;Parent=gene-C9F04_RS08925;Dbxref=Genbank:WP_146712518.1;Name=WP_146712518.1;end_range=1694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024108.1;locus_tag=C9F04_RS08925;partial=true;product=VOC family protein;protein_id=WP_146712518.1;transl_table=11
##sequence-region NZ_PYKF01000479.1 1 1693
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000479.1	RefSeq	region	1	1693	.	+	.	ID=NZ_PYKF01000479.1:1..1693;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000479.1	RefSeq	pseudogene	60	253	.	+	.	ID=gene-C9F04_RS27060;Name=C9F04_RS27060;end_range=253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27060;partial=true;pseudo=true
NZ_PYKF01000479.1	Protein Homology	CDS	60	253	.	+	0	ID=cds-C9F04_RS27060;Parent=gene-C9F04_RS27060;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9F04_RS27060;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11
NZ_PYKF01000479.1	RefSeq	gene	296	781	.	+	.	ID=gene-C9F04_RS14410;Name=C9F04_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14410;old_locus_tag=C9F04_14880
NZ_PYKF01000479.1	Protein Homology	CDS	296	781	.	+	0	ID=cds-WP_001081550.1;Parent=gene-C9F04_RS14410;Dbxref=Genbank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9F04_RS14410;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11
NZ_PYKF01000479.1	RefSeq	gene	766	1149	.	+	.	ID=gene-C9F04_RS14415;Name=C9F04_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14415;old_locus_tag=C9F04_14885
NZ_PYKF01000479.1	Protein Homology	CDS	766	1149	.	+	0	ID=cds-WP_000379146.1;Parent=gene-C9F04_RS14415;Dbxref=Genbank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9F04_RS14415;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11
NZ_PYKF01000479.1	RefSeq	gene	1292	1693	.	+	.	ID=gene-C9F04_RS14420;Name=C9F04_RS14420;end_range=1693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14420;old_locus_tag=C9F04_14890;partial=true
NZ_PYKF01000479.1	Protein Homology	CDS	1292	1693	.	+	0	ID=cds-WP_261771174.1;Parent=gene-C9F04_RS14420;Dbxref=Genbank:WP_261771174.1;Name=WP_261771174.1;end_range=1693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F04_RS14420;partial=true;product=Hcp family type VI secretion system effector;protein_id=WP_261771174.1;transl_table=11
##sequence-region NZ_PYKF01000323.1 1 1623
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000323.1	RefSeq	region	1	1623	.	+	.	ID=NZ_PYKF01000323.1:1..1623;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000323.1	RefSeq	pseudogene	36	356	.	-	.	ID=gene-C9F04_RS09435;Name=C9F04_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09435;old_locus_tag=C9F04_09740;partial=true;pseudo=true;start_range=.,36
NZ_PYKF01000323.1	Protein Homology	CDS	36	356	.	-	0	ID=cds-C9F04_RS09435;Parent=gene-C9F04_RS09435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9F04_RS09435;partial=true;product=ion channel protein;pseudo=true;start_range=.,36;transl_table=11
NZ_PYKF01000323.1	RefSeq	gene	560	1525	.	+	.	ID=gene-C9F04_RS09440;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9F04_RS09440;old_locus_tag=C9F04_09745
NZ_PYKF01000323.1	Protein Homology	CDS	560	1525	.	+	0	ID=cds-WP_135369207.1;Parent=gene-C9F04_RS09440;Dbxref=Genbank:WP_135369207.1;Name=WP_135369207.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9F04_RS09440;product=glucokinase;protein_id=WP_135369207.1;transl_table=11
##sequence-region NZ_PYKF01000389.1 1 1664
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000389.1	RefSeq	region	1	1664	.	+	.	ID=NZ_PYKF01000389.1:1..1664;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000389.1	RefSeq	gene	217	690	.	+	.	ID=gene-C9F04_RS11475;Name=C9F04_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11475;old_locus_tag=C9F04_11860
NZ_PYKF01000389.1	Protein Homology	CDS	217	690	.	+	0	ID=cds-WP_146712653.1;Parent=gene-C9F04_RS11475;Dbxref=Genbank:WP_146712653.1;Name=WP_146712653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9F04_RS11475;product=peptidase;protein_id=WP_146712653.1;transl_table=11
NZ_PYKF01000389.1	RefSeq	pseudogene	1167	1664	.	+	.	ID=gene-C9F04_RS11480;Name=C9F04_RS11480;end_range=1664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11480;old_locus_tag=C9F04_11865;partial=true;pseudo=true
NZ_PYKF01000389.1	Protein Homology	CDS	1167	1664	.	+	0	ID=cds-C9F04_RS11480;Parent=gene-C9F04_RS11480;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=1664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9F04_RS11480;partial=true;product=integrase domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000375.1 1 1663
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000375.1	RefSeq	region	1	1663	.	+	.	ID=NZ_PYKF01000375.1:1..1663;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000375.1	RefSeq	gene	1	1229	.	-	.	ID=gene-C9F04_RS11030;Name=C9F04_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11030;old_locus_tag=C9F04_11390;partial=true;start_range=.,1
NZ_PYKF01000375.1	Protein Homology	CDS	1	1229	.	-	0	ID=cds-WP_146712634.1;Parent=gene-C9F04_RS11030;Dbxref=Genbank:WP_146712634.1;Name=WP_146712634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F04_RS11030;partial=true;product=oxalacetate decarboxylase subunit beta;protein_id=WP_146712634.1;start_range=.,1;transl_table=11
NZ_PYKF01000375.1	RefSeq	pseudogene	1374	1502	.	-	.	ID=gene-C9F04_RS27015;Name=C9F04_RS27015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27015;partial=true;pseudo=true;start_range=.,1374
NZ_PYKF01000375.1	Protein Homology	CDS	1374	1502	.	-	0	ID=cds-C9F04_RS27015;Parent=gene-C9F04_RS27015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F04_RS27015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1374;transl_table=11
NZ_PYKF01000375.1	RefSeq	gene	1515	1663	.	-	.	ID=gene-C9F04_RS11040;Name=C9F04_RS11040;end_range=1663,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11040;old_locus_tag=C9F04_11400;partial=true
NZ_PYKF01000375.1	Protein Homology	CDS	1515	1663	.	-	2	ID=cds-WP_023893864.1;Parent=gene-C9F04_RS11040;Dbxref=Genbank:WP_023893864.1;Name=WP_023893864.1;end_range=1663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS11040;partial=true;product=biotin/lipoyl-binding protein;protein_id=WP_023893864.1;transl_table=11
##sequence-region NZ_PYKF01000819.1 1 1651
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000819.1	RefSeq	region	1	1651	.	+	.	ID=NZ_PYKF01000819.1:1..1651;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000819.1	RefSeq	pseudogene	1	667	.	+	.	ID=gene-C9F04_RS25795;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=pseudogene;gene_synonym=manB;locus_tag=C9F04_RS25795;old_locus_tag=C9F04_26685;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000819.1	Protein Homology	CDS	1	667	.	+	1	ID=cds-C9F04_RS25795;Parent=gene-C9F04_RS25795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033923.1;locus_tag=C9F04_RS25795;partial=true;product=colanic acid biosynthesis phosphomannomutase CpsG;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000819.1	RefSeq	pseudogene	721	1651	.	+	.	ID=gene-C9F04_RS25800;Name=C9F04_RS25800;end_range=1651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25800;old_locus_tag=C9F04_26690;partial=true;pseudo=true
NZ_PYKF01000819.1	Protein Homology	CDS	721	1651	.	+	0	ID=cds-C9F04_RS25800;Parent=gene-C9F04_RS25800;Note=WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156914.1;locus_tag=C9F04_RS25800;partial=true;product=undecaprenyl-phosphate glucose phosphotransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000448.1 1 1644
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000448.1	RefSeq	region	1	1644	.	+	.	ID=NZ_PYKF01000448.1:1..1644;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000448.1	RefSeq	gene	1	690	.	-	.	ID=gene-C9F04_RS13380;Name=C9F04_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13380;old_locus_tag=C9F04_13815;partial=true;start_range=.,1
NZ_PYKF01000448.1	Protein Homology	CDS	1	690	.	-	0	ID=cds-WP_261771097.1;Parent=gene-C9F04_RS13380;Dbxref=Genbank:WP_261771097.1;Name=WP_261771097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F04_RS13380;partial=true;product=proton-conducting transporter membrane subunit;protein_id=WP_261771097.1;start_range=.,1;transl_table=11
NZ_PYKF01000448.1	RefSeq	gene	697	1644	.	-	.	ID=gene-C9F04_RS13385;Name=nuoM;end_range=1644,.;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9F04_RS13385;old_locus_tag=C9F04_13820;partial=true
NZ_PYKF01000448.1	Protein Homology	CDS	697	1644	.	-	0	ID=cds-WP_146712748.1;Parent=gene-C9F04_RS13385;Dbxref=Genbank:WP_146712748.1;Name=WP_146712748.1;Ontology_term=GO:0042773,GO:0008137;end_range=1644,.;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F04_RS13385;partial=true;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_146712748.1;transl_table=11
##sequence-region NZ_PYKF01000041.1 1 1643
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000041.1	RefSeq	region	1	1643	.	+	.	ID=NZ_PYKF01000041.1:1..1643;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000041.1	RefSeq	gene	1	643	.	+	.	ID=gene-C9F04_RS00590;Name=C9F04_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00590;old_locus_tag=C9F04_00635;partial=true;start_range=.,1
NZ_PYKF01000041.1	Protein Homology	CDS	1	643	.	+	1	ID=cds-WP_146712158.1;Parent=gene-C9F04_RS00590;Dbxref=Genbank:WP_146712158.1;Name=WP_146712158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9F04_RS00590;partial=true;product=DNRLRE domain-containing protein;protein_id=WP_146712158.1;start_range=.,1;transl_table=11
NZ_PYKF01000041.1	RefSeq	gene	727	1380	.	-	.	ID=gene-C9F04_RS00595;Name=C9F04_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00595;old_locus_tag=C9F04_00640
NZ_PYKF01000041.1	Protein Homology	CDS	727	1380	.	-	0	ID=cds-WP_135369341.1;Parent=gene-C9F04_RS00595;Dbxref=Genbank:WP_135369341.1;Name=WP_135369341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=C9F04_RS00595;product=molecular chaperone;protein_id=WP_135369341.1;transl_table=11
NZ_PYKF01000041.1	RefSeq	pseudogene	1396	1643	.	-	.	ID=gene-C9F04_RS00600;Name=C9F04_RS00600;end_range=1643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00600;old_locus_tag=C9F04_00645;partial=true;pseudo=true
NZ_PYKF01000041.1	Protein Homology	CDS	1396	1643	.	-	2	ID=cds-C9F04_RS00600;Parent=gene-C9F04_RS00600;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9F04_RS00600;partial=true;product=dimethyl sulfoxide reductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000194.1 1 16619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000194.1	RefSeq	region	1	16619	.	+	.	ID=NZ_PYKF01000194.1:1..16619;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000194.1	RefSeq	gene	74	589	.	-	.	ID=gene-C9F04_RS04490;Name=C9F04_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04490;old_locus_tag=C9F04_04630
NZ_PYKF01000194.1	Protein Homology	CDS	74	589	.	-	0	ID=cds-WP_077907202.1;Parent=gene-C9F04_RS04490;Dbxref=Genbank:WP_077907202.1;Name=WP_077907202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=C9F04_RS04490;product=RNA helicase;protein_id=WP_077907202.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	681	1091	.	+	.	ID=gene-C9F04_RS04495;Name=C9F04_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04495;old_locus_tag=C9F04_04635
NZ_PYKF01000194.1	Protein Homology	CDS	681	1091	.	+	0	ID=cds-WP_146712340.1;Parent=gene-C9F04_RS04495;Dbxref=Genbank:WP_146712340.1;Name=WP_146712340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9F04_RS04495;product=hypothetical protein;protein_id=WP_146712340.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	1078	1482	.	+	.	ID=gene-C9F04_RS04500;Name=C9F04_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04500;old_locus_tag=C9F04_04640
NZ_PYKF01000194.1	Protein Homology	CDS	1078	1482	.	+	0	ID=cds-WP_021294050.1;Parent=gene-C9F04_RS04500;Dbxref=Genbank:WP_021294050.1;Name=WP_021294050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9F04_RS04500;product=hypothetical protein;protein_id=WP_021294050.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	1606	2490	.	+	.	ID=gene-C9F04_RS04505;Name=C9F04_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04505;old_locus_tag=C9F04_04645
NZ_PYKF01000194.1	Protein Homology	CDS	1606	2490	.	+	0	ID=cds-WP_000019032.1;Parent=gene-C9F04_RS04505;Dbxref=Genbank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9F04_RS04505;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	2603	3028	.	-	.	ID=gene-C9F04_RS04510;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9F04_RS04510;old_locus_tag=C9F04_04650
NZ_PYKF01000194.1	Protein Homology	CDS	2603	3028	.	-	0	ID=cds-WP_001251476.1;Parent=gene-C9F04_RS04510;Dbxref=Genbank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9F04_RS04510;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	3035	3769	.	-	.	ID=gene-C9F04_RS04515;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9F04_RS04515;old_locus_tag=C9F04_04655
NZ_PYKF01000194.1	Protein Homology	CDS	3035	3769	.	-	0	ID=cds-WP_000527859.1;Parent=gene-C9F04_RS04515;Dbxref=Genbank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9F04_RS04515;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	4021	5208	.	+	.	ID=gene-C9F04_RS04520;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9F04_RS04520;old_locus_tag=C9F04_04665
NZ_PYKF01000194.1	Protein Homology	CDS	4021	5208	.	+	0	ID=cds-WP_000130270.1;Parent=gene-C9F04_RS04520;Dbxref=Genbank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=cellular amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9F04_RS04520;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	5348	6007	.	+	.	ID=gene-C9F04_RS04525;Name=C9F04_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04525;old_locus_tag=C9F04_04670
NZ_PYKF01000194.1	Protein Homology	CDS	5348	6007	.	+	0	ID=cds-WP_000268444.1;Parent=gene-C9F04_RS04525;Dbxref=Genbank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9F04_RS04525;product=DedA family protein;protein_id=WP_000268444.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	6071	6970	.	-	.	ID=gene-C9F04_RS04530;Name=C9F04_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04530;old_locus_tag=C9F04_04675
NZ_PYKF01000194.1	Protein Homology	CDS	6071	6970	.	-	0	ID=cds-WP_146712341.1;Parent=gene-C9F04_RS04530;Dbxref=Genbank:WP_146712341.1;Name=WP_146712341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9F04_RS04530;product=AraC family transcriptional regulator;protein_id=WP_146712341.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	7163	8326	.	+	.	ID=gene-C9F04_RS04535;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9F04_RS04535;old_locus_tag=C9F04_04680
NZ_PYKF01000194.1	Protein Homology	CDS	7163	8326	.	+	0	ID=cds-WP_146712342.1;Parent=gene-C9F04_RS04535;Dbxref=Genbank:WP_146712342.1;Name=WP_146712342.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9F04_RS04535;product=alcohol dehydrogenase;protein_id=WP_146712342.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	pseudogene	8432	9259	.	+	.	ID=gene-C9F04_RS04540;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=C9F04_RS04540;old_locus_tag=C9F04_04685;pseudo=true
NZ_PYKF01000194.1	Protein Homology	CDS	8432	9259	.	+	0	ID=cds-C9F04_RS04540;Parent=gene-C9F04_RS04540;Note=internal stop;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9F04_RS04540;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11
NZ_PYKF01000194.1	RefSeq	pseudogene	9425	10910	.	+	.	ID=gene-C9F04_RS04545;Name=C9F04_RS04545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04545;old_locus_tag=C9F04_04690;pseudo=true
NZ_PYKF01000194.1	Protein Homology	CDS	9425	10910	.	+	0	ID=cds-C9F04_RS04545;Parent=gene-C9F04_RS04545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9F04_RS04545;product=anion permease;pseudo=true;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	10955	11410	.	+	.	ID=gene-C9F04_RS04550;Name=C9F04_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04550;old_locus_tag=C9F04_04695
NZ_PYKF01000194.1	Protein Homology	CDS	10955	11410	.	+	0	ID=cds-WP_000128242.1;Parent=gene-C9F04_RS04550;Dbxref=Genbank:WP_000128242.1;Name=WP_000128242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9F04_RS04550;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	11568	11762	.	-	.	ID=gene-C9F04_RS04555;Name=C9F04_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04555;old_locus_tag=C9F04_04700
NZ_PYKF01000194.1	GeneMarkS-2+	CDS	11568	11762	.	-	0	ID=cds-WP_000525382.1;Parent=gene-C9F04_RS04555;Dbxref=Genbank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS04555;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	11965	14136	.	-	.	ID=gene-C9F04_RS04560;Name=C9F04_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04560;old_locus_tag=C9F04_04705
NZ_PYKF01000194.1	Protein Homology	CDS	11965	14136	.	-	0	ID=cds-WP_135369102.1;Parent=gene-C9F04_RS04560;Dbxref=Genbank:WP_135369102.1;Name=WP_135369102.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9F04_RS04560;product=YgiQ family radical SAM protein;protein_id=WP_135369102.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	14625	15608	.	+	.	ID=gene-C9F04_RS04565;Name=C9F04_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04565;old_locus_tag=C9F04_04710
NZ_PYKF01000194.1	Protein Homology	CDS	14625	15608	.	+	0	ID=cds-WP_146712343.1;Parent=gene-C9F04_RS04565;Dbxref=Genbank:WP_146712343.1;Name=WP_146712343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9F04_RS04565;product=TRAP transporter substrate-binding protein;protein_id=WP_146712343.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	15650	16132	.	+	.	ID=gene-C9F04_RS04570;Name=C9F04_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04570;old_locus_tag=C9F04_04715
NZ_PYKF01000194.1	Protein Homology	CDS	15650	16132	.	+	0	ID=cds-WP_001221828.1;Parent=gene-C9F04_RS04570;Dbxref=Genbank:WP_001221828.1;Name=WP_001221828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9F04_RS04570;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11
NZ_PYKF01000194.1	RefSeq	gene	16143	16619	.	+	.	ID=gene-C9F04_RS04575;Name=C9F04_RS04575;end_range=16619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04575;old_locus_tag=C9F04_04720;partial=true
NZ_PYKF01000194.1	Protein Homology	CDS	16143	16619	.	+	0	ID=cds-WP_146712344.1;Parent=gene-C9F04_RS04575;Dbxref=Genbank:WP_146712344.1;Name=WP_146712344.1;end_range=16619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9F04_RS04575;partial=true;product=TRAP transporter large permease subunit;protein_id=WP_146712344.1;transl_table=11
##sequence-region NZ_PYKF01000745.1 1 1619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000745.1	RefSeq	region	1	1619	.	+	.	ID=NZ_PYKF01000745.1:1..1619;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000745.1	RefSeq	gene	45	1034	.	-	.	ID=gene-C9F04_RS23090;Name=C9F04_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23090;old_locus_tag=C9F04_23860
NZ_PYKF01000745.1	Protein Homology	CDS	45	1034	.	-	0	ID=cds-WP_135369299.1;Parent=gene-C9F04_RS23090;Dbxref=Genbank:WP_135369299.1;Name=WP_135369299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=C9F04_RS23090;product=DUF968 domain-containing protein;protein_id=WP_135369299.1;transl_table=11
NZ_PYKF01000745.1	RefSeq	gene	1042	1619	.	-	.	ID=gene-C9F04_RS23095;Name=C9F04_RS23095;end_range=1619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23095;old_locus_tag=C9F04_23865;partial=true
NZ_PYKF01000745.1	Protein Homology	CDS	1042	1619	.	-	2	ID=cds-WP_146713238.1;Parent=gene-C9F04_RS23095;Dbxref=Genbank:WP_146713238.1;Name=WP_146713238.1;end_range=1619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061418.1;locus_tag=C9F04_RS23095;partial=true;product=KilA-N domain-containing protein;protein_id=WP_146713238.1;transl_table=11
##sequence-region NZ_PYKF01000690.1 1 1605
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000690.1	RefSeq	region	1	1605	.	+	.	ID=NZ_PYKF01000690.1:1..1605;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000690.1	RefSeq	pseudogene	35	517	.	-	.	ID=gene-C9F04_RS21240;Name=C9F04_RS21240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21240;old_locus_tag=C9F04_21930;partial=true;pseudo=true;start_range=.,35
NZ_PYKF01000690.1	Protein Homology	CDS	35	517	.	-	0	ID=cds-C9F04_RS21240;Parent=gene-C9F04_RS21240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9F04_RS21240;partial=true;product=response regulator;pseudo=true;start_range=.,35;transl_table=11
NZ_PYKF01000690.1	RefSeq	gene	613	753	.	+	.	ID=gene-C9F04_RS21245;Name=C9F04_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21245;old_locus_tag=C9F04_21935
NZ_PYKF01000690.1	Protein Homology	CDS	613	753	.	+	0	ID=cds-WP_001541509.1;Parent=gene-C9F04_RS21245;Dbxref=Genbank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9F04_RS21245;product=hypothetical protein;protein_id=WP_001541509.1;transl_table=11
NZ_PYKF01000690.1	RefSeq	gene	1153	1605	.	+	.	ID=gene-C9F04_RS21250;Name=C9F04_RS21250;end_range=1605,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21250;old_locus_tag=C9F04_21940;partial=true
NZ_PYKF01000690.1	Protein Homology	CDS	1153	1605	.	+	0	ID=cds-WP_146713133.1;Parent=gene-C9F04_RS21250;Dbxref=Genbank:WP_146713133.1;Name=WP_146713133.1;end_range=1605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=C9F04_RS21250;partial=true;product=tRNA/rRNA methyltransferase;protein_id=WP_146713133.1;transl_table=11
##sequence-region NZ_PYKF01000470.1 1 1604
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000470.1	RefSeq	region	1	1604	.	+	.	ID=NZ_PYKF01000470.1:1..1604;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000470.1	RefSeq	pseudogene	1	769	.	+	.	ID=gene-C9F04_RS14120;Name=mak;gbkey=Gene;gene=mak;gene_biotype=pseudogene;locus_tag=C9F04_RS14120;old_locus_tag=C9F04_14575;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000470.1	Protein Homology	CDS	1	769	.	+	1	ID=cds-C9F04_RS14120;Parent=gene-C9F04_RS14120;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245716.1;locus_tag=C9F04_RS14120;partial=true;product=fructokinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000470.1	RefSeq	pseudogene	789	1604	.	-	.	ID=gene-C9F04_RS14125;Name=C9F04_RS14125;end_range=1604,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14125;old_locus_tag=C9F04_14580;partial=true;pseudo=true
NZ_PYKF01000470.1	Protein Homology	CDS	789	1604	.	-	0	ID=cds-C9F04_RS14125;Parent=gene-C9F04_RS14125;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=1604,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9F04_RS14125;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000273.1 1 1600
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000273.1	RefSeq	region	1	1600	.	+	.	ID=NZ_PYKF01000273.1:1..1600;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000273.1	RefSeq	pseudogene	1	180	.	+	.	ID=gene-C9F04_RS07555;Name=C9F04_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07555;old_locus_tag=C9F04_07800;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000273.1	Protein Homology	CDS	1	180	.	+	0	ID=cds-C9F04_RS07555;Parent=gene-C9F04_RS07555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9F04_RS07555;partial=true;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000273.1	RefSeq	gene	337	1110	.	-	.	ID=gene-C9F04_RS07560;Name=C9F04_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07560;old_locus_tag=C9F04_07805
NZ_PYKF01000273.1	Protein Homology	CDS	337	1110	.	-	0	ID=cds-WP_146712478.1;Parent=gene-C9F04_RS07560;Dbxref=Genbank:WP_146712478.1;Name=WP_146712478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9F04_RS07560;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_146712478.1;transl_table=11
NZ_PYKF01000273.1	RefSeq	pseudogene	1221	1600	.	-	.	ID=gene-C9F04_RS07565;Name=C9F04_RS07565;end_range=1600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07565;old_locus_tag=C9F04_07810;partial=true;pseudo=true
NZ_PYKF01000273.1	Protein Homology	CDS	1221	1600	.	-	2	ID=cds-C9F04_RS07565;Parent=gene-C9F04_RS07565;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9F04_RS07565;partial=true;product=galactitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000260.1 1 1597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000260.1	RefSeq	region	1	1597	.	+	.	ID=NZ_PYKF01000260.1:1..1597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000260.1	RefSeq	gene	1	212	.	-	.	ID=gene-C9F04_RS07285;Name=C9F04_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07285;old_locus_tag=C9F04_07525;partial=true;start_range=.,1
NZ_PYKF01000260.1	Protein Homology	CDS	1	212	.	-	0	ID=cds-WP_000031661.1-2;Parent=gene-C9F04_RS07285;Dbxref=Genbank:WP_000031661.1;Name=WP_000031661.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F04_RS07285;partial=true;product=GTP-binding protein;protein_id=WP_000031661.1;start_range=.,1;transl_table=11
NZ_PYKF01000260.1	RefSeq	gene	328	403	.	-	.	ID=gene-C9F04_RS07290;Name=C9F04_RS07290;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS07290;old_locus_tag=C9F04_07530
NZ_PYKF01000260.1	tRNAscan-SE	tRNA	328	403	.	-	.	ID=rna-C9F04_RS07290;Parent=gene-C9F04_RS07290;anticodon=(pos:complement(368..370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07290;product=tRNA-Thr
NZ_PYKF01000260.1	tRNAscan-SE	exon	328	403	.	-	.	ID=exon-C9F04_RS07290-1;Parent=rna-C9F04_RS07290;anticodon=(pos:complement(368..370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07290;product=tRNA-Thr
NZ_PYKF01000260.1	RefSeq	gene	410	484	.	-	.	ID=gene-C9F04_RS07295;Name=C9F04_RS07295;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS07295;old_locus_tag=C9F04_07535
NZ_PYKF01000260.1	tRNAscan-SE	tRNA	410	484	.	-	.	ID=rna-C9F04_RS07295;Parent=gene-C9F04_RS07295;anticodon=(pos:complement(449..451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07295;product=tRNA-Gly
NZ_PYKF01000260.1	tRNAscan-SE	exon	410	484	.	-	.	ID=exon-C9F04_RS07295-1;Parent=rna-C9F04_RS07295;anticodon=(pos:complement(449..451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07295;product=tRNA-Gly
NZ_PYKF01000260.1	RefSeq	gene	601	685	.	-	.	ID=gene-C9F04_RS07300;Name=C9F04_RS07300;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS07300;old_locus_tag=C9F04_07540
NZ_PYKF01000260.1	tRNAscan-SE	tRNA	601	685	.	-	.	ID=rna-C9F04_RS07300;Parent=gene-C9F04_RS07300;anticodon=(pos:complement(649..651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07300;product=tRNA-Tyr
NZ_PYKF01000260.1	tRNAscan-SE	exon	601	685	.	-	.	ID=exon-C9F04_RS07300-1;Parent=rna-C9F04_RS07300;anticodon=(pos:complement(649..651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07300;product=tRNA-Tyr
NZ_PYKF01000260.1	RefSeq	gene	694	769	.	-	.	ID=gene-C9F04_RS07305;Name=C9F04_RS07305;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS07305;old_locus_tag=C9F04_07545
NZ_PYKF01000260.1	tRNAscan-SE	tRNA	694	769	.	-	.	ID=rna-C9F04_RS07305;Parent=gene-C9F04_RS07305;anticodon=(pos:complement(734..736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07305;product=tRNA-Thr
NZ_PYKF01000260.1	tRNAscan-SE	exon	694	769	.	-	.	ID=exon-C9F04_RS07305-1;Parent=rna-C9F04_RS07305;anticodon=(pos:complement(734..736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS07305;product=tRNA-Thr
NZ_PYKF01000260.1	RefSeq	gene	789	962	.	+	.	ID=gene-C9F04_RS07310;Name=C9F04_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07310;old_locus_tag=C9F04_07550
NZ_PYKF01000260.1	Protein Homology	CDS	789	962	.	+	0	ID=cds-WP_001541267.1;Parent=gene-C9F04_RS07310;Dbxref=Genbank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9F04_RS07310;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11
NZ_PYKF01000260.1	RefSeq	pseudogene	1171	1597	.	+	.	ID=gene-C9F04_RS07315;Name=C9F04_RS07315;end_range=1597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07315;old_locus_tag=C9F04_07560;partial=true;pseudo=true
NZ_PYKF01000260.1	Protein Homology	CDS	1171	1597	.	+	0	ID=cds-C9F04_RS07315;Parent=gene-C9F04_RS07315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9F04_RS07315;partial=true;product=type I pantothenate kinase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000137.1 1 1594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000137.1	RefSeq	region	1	1594	.	+	.	ID=NZ_PYKF01000137.1:1..1594;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000137.1	RefSeq	gene	1	867	.	+	.	ID=gene-C9F04_RS02820;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9F04_RS02820;old_locus_tag=C9F04_02925;partial=true;start_range=.,1
NZ_PYKF01000137.1	Protein Homology	CDS	1	867	.	+	0	ID=cds-WP_146712262.1;Parent=gene-C9F04_RS02820;Dbxref=Genbank:WP_146712262.1;Name=WP_146712262.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9F04_RS02820;partial=true;product=flagellar biosynthesis protein FlhB;protein_id=WP_146712262.1;start_range=.,1;transl_table=11
NZ_PYKF01000137.1	RefSeq	gene	860	1594	.	+	.	ID=gene-C9F04_RS02825;Name=C9F04_RS02825;end_range=1594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02825;old_locus_tag=C9F04_02930;partial=true
NZ_PYKF01000137.1	Protein Homology	CDS	860	1594	.	+	0	ID=cds-WP_186798987.1;Parent=gene-C9F04_RS02825;Dbxref=Genbank:WP_186798987.1;Name=WP_186798987.1;Ontology_term=GO:0009306,GO:0016020;end_range=1594,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9F04_RS02825;partial=true;product=FHIPEP family type III secretion protein;protein_id=WP_186798987.1;transl_table=11
##sequence-region NZ_PYKF01000192.1 1 1589
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000192.1	RefSeq	region	1	1589	.	+	.	ID=NZ_PYKF01000192.1:1..1589;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000192.1	RefSeq	gene	1	823	.	-	.	ID=gene-C9F04_RS04445;Name=C9F04_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04445;old_locus_tag=C9F04_04585;partial=true;start_range=.,1
NZ_PYKF01000192.1	Protein Homology	CDS	1	823	.	-	0	ID=cds-WP_146712337.1;Parent=gene-C9F04_RS04445;Dbxref=Genbank:WP_146712337.1;Name=WP_146712337.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9F04_RS04445;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_146712337.1;start_range=.,1;transl_table=11
NZ_PYKF01000192.1	RefSeq	gene	926	1589	.	+	.	ID=gene-C9F04_RS04450;Name=C9F04_RS04450;end_range=1589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04450;old_locus_tag=C9F04_04590;partial=true
NZ_PYKF01000192.1	Protein Homology	CDS	926	1589	.	+	0	ID=cds-WP_146712338.1;Parent=gene-C9F04_RS04450;Dbxref=Genbank:WP_146712338.1;Name=WP_146712338.1;end_range=1589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9F04_RS04450;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_146712338.1;transl_table=11
##sequence-region NZ_PYKF01000215.1 1 1583
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000215.1	RefSeq	region	1	1583	.	+	.	ID=NZ_PYKF01000215.1:1..1583;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000215.1	RefSeq	gene	159	246	.	-	.	ID=gene-C9F04_RS05350;Name=C9F04_RS05350;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS05350;old_locus_tag=C9F04_05525
NZ_PYKF01000215.1	tRNAscan-SE	tRNA	159	246	.	-	.	ID=rna-C9F04_RS05350;Parent=gene-C9F04_RS05350;anticodon=(pos:complement(210..212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05350;product=tRNA-Ser
NZ_PYKF01000215.1	tRNAscan-SE	exon	159	246	.	-	.	ID=exon-C9F04_RS05350-1;Parent=rna-C9F04_RS05350;anticodon=(pos:complement(210..212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS05350;product=tRNA-Ser
NZ_PYKF01000215.1	RefSeq	gene	641	1369	.	+	.	ID=gene-C9F04_RS05355;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9F04_RS05355;old_locus_tag=C9F04_05530
NZ_PYKF01000215.1	Protein Homology	CDS	641	1369	.	+	0	ID=cds-WP_261770748.1;Parent=gene-C9F04_RS05355;Dbxref=Genbank:WP_261770748.1;Name=WP_261770748.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9F04_RS05355;product=FtsH protease modulator YccA;protein_id=WP_261770748.1;transl_table=11
NZ_PYKF01000215.1	RefSeq	pseudogene	1387	1551	.	+	.	ID=gene-C9F04_RS05360;Name=C9F04_RS05360;end_range=1551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05360;old_locus_tag=C9F04_05535;partial=true;pseudo=true
NZ_PYKF01000215.1	Protein Homology	CDS	1387	1551	.	+	0	ID=cds-C9F04_RS05360;Parent=gene-C9F04_RS05360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9F04_RS05360;partial=true;product=TusE/DsrC/DsvC family sulfur relay protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000021.1 1 1579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000021.1	RefSeq	region	1	1579	.	+	.	ID=NZ_PYKF01000021.1:1..1579;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000021.1	RefSeq	gene	18	1559	.	+	.	ID=gene-C9F04_RS00295;Name=C9F04_RS00295;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS00295;old_locus_tag=C9F04_00320
NZ_PYKF01000021.1	cmsearch	rRNA	18	1559	.	+	.	ID=rna-C9F04_RS00295;Parent=gene-C9F04_RS00295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00295;product=16S ribosomal RNA
NZ_PYKF01000021.1	cmsearch	exon	18	1559	.	+	.	ID=exon-C9F04_RS00295-1;Parent=rna-C9F04_RS00295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00295;product=16S ribosomal RNA
##sequence-region NZ_PYKF01000647.1 1 1558
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000647.1	RefSeq	region	1	1558	.	+	.	ID=NZ_PYKF01000647.1:1..1558;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000647.1	RefSeq	gene	1	527	.	+	.	ID=gene-C9F04_RS19875;Name=C9F04_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19875;old_locus_tag=C9F04_20530;partial=true;start_range=.,1
NZ_PYKF01000647.1	Protein Homology	CDS	1	527	.	+	2	ID=cds-WP_146713064.1;Parent=gene-C9F04_RS19875;Dbxref=Genbank:WP_146713064.1;Name=WP_146713064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9F04_RS19875;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_146713064.1;start_range=.,1;transl_table=11
NZ_PYKF01000647.1	RefSeq	gene	706	1558	.	+	.	ID=gene-C9F04_RS19880;Name=C9F04_RS19880;end_range=1558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19880;old_locus_tag=C9F04_20535;partial=true
NZ_PYKF01000647.1	Protein Homology	CDS	706	1558	.	+	0	ID=cds-WP_261771401.1;Parent=gene-C9F04_RS19880;Dbxref=Genbank:WP_261771401.1;Name=WP_261771401.1;Ontology_term=GO:0005524;end_range=1558,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9F04_RS19880;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_261771401.1;transl_table=11
##sequence-region NZ_PYKF01000424.1 1 16361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000424.1	RefSeq	region	1	16361	.	+	.	ID=NZ_PYKF01000424.1:1..16361;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000424.1	RefSeq	gene	1	1946	.	+	.	ID=gene-C9F04_RS12695;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9F04_RS12695;old_locus_tag=C9F04_13115;partial=true;start_range=.,1
NZ_PYKF01000424.1	Protein Homology	CDS	1	1946	.	+	2	ID=cds-WP_146712710.1;Parent=gene-C9F04_RS12695;Dbxref=Genbank:WP_146712710.1;Name=WP_146712710.1;Ontology_term=GO:0005977,GO:0004645;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=glycogen metabolic process|0005977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462435.1;locus_tag=C9F04_RS12695;partial=true;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_146712710.1;start_range=.,1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	2124	2879	.	+	.	ID=gene-C9F04_RS12700;Name=C9F04_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12700;old_locus_tag=C9F04_13120
NZ_PYKF01000424.1	Protein Homology	CDS	2124	2879	.	+	0	ID=cds-WP_000724553.1;Parent=gene-C9F04_RS12700;Dbxref=Genbank:WP_000724553.1;Name=WP_000724553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=C9F04_RS12700;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	2923	3828	.	-	.	ID=gene-C9F04_RS12705;Name=C9F04_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12705;old_locus_tag=C9F04_13125
NZ_PYKF01000424.1	Protein Homology	CDS	2923	3828	.	-	0	ID=cds-WP_000192193.1;Parent=gene-C9F04_RS12705;Dbxref=Genbank:WP_000192193.1;Name=WP_000192193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=C9F04_RS12705;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	3872	5587	.	-	.	ID=gene-C9F04_RS12710;Name=C9F04_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12710;old_locus_tag=C9F04_13130
NZ_PYKF01000424.1	Protein Homology	CDS	3872	5587	.	-	0	ID=cds-WP_000078497.1;Parent=gene-C9F04_RS12710;Dbxref=Genbank:WP_000078497.1;Name=WP_000078497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9F04_RS12710;product=dihydroxy-acid dehydratase;protein_id=WP_000078497.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	5584	6918	.	-	.	ID=gene-C9F04_RS12715;Name=C9F04_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12715;old_locus_tag=C9F04_13135
NZ_PYKF01000424.1	Protein Homology	CDS	5584	6918	.	-	0	ID=cds-WP_001518078.1;Parent=gene-C9F04_RS12715;Dbxref=Genbank:WP_001518078.1;Name=WP_001518078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F04_RS12715;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	7256	8365	.	+	.	ID=gene-C9F04_RS12720;Name=C9F04_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12720;old_locus_tag=C9F04_13140
NZ_PYKF01000424.1	Protein Homology	CDS	7256	8365	.	+	0	ID=cds-WP_000258846.1;Parent=gene-C9F04_RS12720;Dbxref=Genbank:WP_000258846.1;Name=WP_000258846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=C9F04_RS12720;product=glycerol dehydrogenase;protein_id=WP_000258846.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	8523	10019	.	+	.	ID=gene-C9F04_RS12725;Name=C9F04_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12725;old_locus_tag=C9F04_13145
NZ_PYKF01000424.1	Protein Homology	CDS	8523	10019	.	+	0	ID=cds-WP_261771055.1;Parent=gene-C9F04_RS12725;Dbxref=Genbank:WP_261771055.1;Name=WP_261771055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=C9F04_RS12725;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_261771055.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	10029	10574	.	+	.	ID=gene-C9F04_RS12730;Name=C9F04_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12730;old_locus_tag=C9F04_13150
NZ_PYKF01000424.1	Protein Homology	CDS	10029	10574	.	+	0	ID=cds-WP_146712712.1;Parent=gene-C9F04_RS12730;Dbxref=Genbank:WP_146712712.1;Name=WP_146712712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9F04_RS12730;product=hypothetical protein;protein_id=WP_146712712.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	10621	12129	.	-	.	ID=gene-C9F04_RS12735;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9F04_RS12735;old_locus_tag=C9F04_13155
NZ_PYKF01000424.1	Protein Homology	CDS	10621	12129	.	-	0	ID=cds-WP_146712713.1;Parent=gene-C9F04_RS12735;Dbxref=Genbank:WP_146712713.1;Name=WP_146712713.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9F04_RS12735;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_146712713.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	12328	12654	.	+	.	ID=gene-C9F04_RS12740;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9F04_RS12740;old_locus_tag=C9F04_13160
NZ_PYKF01000424.1	Protein Homology	CDS	12328	12654	.	+	0	ID=cds-WP_000434523.1;Parent=gene-C9F04_RS12740;Dbxref=Genbank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9F04_RS12740;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	12730	13560	.	+	.	ID=gene-C9F04_RS12745;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9F04_RS12745;old_locus_tag=C9F04_13165
NZ_PYKF01000424.1	Protein Homology	CDS	12730	13560	.	+	0	ID=cds-WP_135369726.1;Parent=gene-C9F04_RS12745;Dbxref=Genbank:WP_135369726.1;Name=WP_135369726.1;Ontology_term=GO:0006508,GO:0004252,GO:0016021;gbkey=CDS;gene=glpG;go_component=integral component of membrane|0016021||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9F04_RS12745;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_135369726.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	13654	14412	.	+	.	ID=gene-C9F04_RS12750;Name=C9F04_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12750;old_locus_tag=C9F04_13170
NZ_PYKF01000424.1	Protein Homology	CDS	13654	14412	.	+	0	ID=cds-WP_000815085.1;Parent=gene-C9F04_RS12750;Dbxref=Genbank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9F04_RS12750;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	gene	14409	15992	.	-	.	ID=gene-C9F04_RS12755;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=C9F04_RS12755;old_locus_tag=C9F04_13175
NZ_PYKF01000424.1	Protein Homology	CDS	14409	15992	.	-	0	ID=cds-WP_146712714.1;Parent=gene-C9F04_RS12755;Dbxref=Genbank:WP_146712714.1;Name=WP_146712714.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9F04_RS12755;product=RNA repair transcriptional activator RtcR;protein_id=WP_146712714.1;transl_table=11
NZ_PYKF01000424.1	RefSeq	pseudogene	16182	16361	.	+	.	ID=gene-C9F04_RS12760;Name=C9F04_RS12760;end_range=16361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12760;old_locus_tag=C9F04_13180;partial=true;pseudo=true
NZ_PYKF01000424.1	Protein Homology	CDS	16182	16361	.	+	0	ID=cds-C9F04_RS12760;Parent=gene-C9F04_RS12760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=16361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9F04_RS12760;partial=true;product=TROVE domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000635.1 1 35830
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000635.1	RefSeq	region	1	35830	.	+	.	ID=NZ_PYKF01000635.1:1..35830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000635.1	RefSeq	gene	1	1283	.	+	.	ID=gene-C9F04_RS19295;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9F04_RS19295;old_locus_tag=C9F04_19925;partial=true;start_range=.,1
NZ_PYKF01000635.1	Protein Homology	CDS	1	1283	.	+	2	ID=cds-WP_146713037.1;Parent=gene-C9F04_RS19295;Dbxref=Genbank:WP_146713037.1;Name=WP_146713037.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9F04_RS19295;partial=true;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_146713037.1;start_range=.,1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	1293	2486	.	+	.	ID=gene-C9F04_RS19300;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9F04_RS19300;old_locus_tag=C9F04_19930
NZ_PYKF01000635.1	Protein Homology	CDS	1293	2486	.	+	0	ID=cds-WP_146713038.1;Parent=gene-C9F04_RS19300;Dbxref=Genbank:WP_146713038.1;Name=WP_146713038.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9F04_RS19300;product=tryptophan synthase subunit beta;protein_id=WP_146713038.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	2486	3292	.	+	.	ID=gene-C9F04_RS19305;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9F04_RS19305;old_locus_tag=C9F04_19935
NZ_PYKF01000635.1	Protein Homology	CDS	2486	3292	.	+	0	ID=cds-WP_058145069.1;Parent=gene-C9F04_RS19305;Dbxref=Genbank:WP_058145069.1;Name=WP_058145069.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9F04_RS19305;product=tryptophan synthase subunit alpha;protein_id=WP_058145069.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	3772	3954	.	+	.	ID=gene-C9F04_RS19310;Name=C9F04_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19310;old_locus_tag=C9F04_19940
NZ_PYKF01000635.1	Protein Homology	CDS	3772	3954	.	+	0	ID=cds-WP_000807657.1;Parent=gene-C9F04_RS19310;Dbxref=Genbank:WP_000807657.1;Name=WP_000807657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9F04_RS19310;product=general stress protein;protein_id=WP_000807657.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	4044	4547	.	+	.	ID=gene-C9F04_RS19315;Name=C9F04_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19315;old_locus_tag=C9F04_19945
NZ_PYKF01000635.1	Protein Homology	CDS	4044	4547	.	+	0	ID=cds-WP_023219046.1;Parent=gene-C9F04_RS19315;Dbxref=Genbank:WP_023219046.1;Name=WP_023219046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9F04_RS19315;product=ferritin-like domain-containing protein;protein_id=WP_023219046.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	pseudogene	4621	5127	.	+	.	ID=gene-C9F04_RS19320;Name=C9F04_RS19320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19320;old_locus_tag=C9F04_19950;pseudo=true
NZ_PYKF01000635.1	Protein Homology	CDS	4621	5127	.	+	0	ID=cds-C9F04_RS19320;Parent=gene-C9F04_RS19320;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9F04_RS19320;product=ferritin-like domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	5147	6025	.	+	.	ID=gene-C9F04_RS19325;Name=C9F04_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19325;old_locus_tag=C9F04_19955
NZ_PYKF01000635.1	Protein Homology	CDS	5147	6025	.	+	0	ID=cds-WP_000488354.1;Parent=gene-C9F04_RS19325;Dbxref=Genbank:WP_000488354.1;Name=WP_000488354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9F04_RS19325;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	6107	6745	.	-	.	ID=gene-C9F04_RS19330;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9F04_RS19330;old_locus_tag=C9F04_19960
NZ_PYKF01000635.1	Protein Homology	CDS	6107	6745	.	-	0	ID=cds-WP_146713039.1;Parent=gene-C9F04_RS19330;Dbxref=Genbank:WP_146713039.1;Name=WP_146713039.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9F04_RS19330;product=outer membrane protein OmpW;protein_id=WP_146713039.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	7082	7486	.	+	.	ID=gene-C9F04_RS19335;Name=C9F04_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19335;old_locus_tag=C9F04_19965
NZ_PYKF01000635.1	Protein Homology	CDS	7082	7486	.	+	0	ID=cds-WP_135369061.1;Parent=gene-C9F04_RS19335;Dbxref=Genbank:WP_135369061.1;Name=WP_135369061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9F04_RS19335;product=YkgJ family cysteine cluster protein;protein_id=WP_135369061.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	7512	8255	.	+	.	ID=gene-C9F04_RS19340;Name=C9F04_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19340;old_locus_tag=C9F04_19970
NZ_PYKF01000635.1	Protein Homology	CDS	7512	8255	.	+	0	ID=cds-WP_146713040.1;Parent=gene-C9F04_RS19340;Dbxref=Genbank:WP_146713040.1;Name=WP_146713040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9F04_RS19340;product=YciC family protein;protein_id=WP_146713040.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	8312	8851	.	+	.	ID=gene-C9F04_RS19345;Name=C9F04_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19345;old_locus_tag=C9F04_19975
NZ_PYKF01000635.1	Protein Homology	CDS	8312	8851	.	+	0	ID=cds-WP_000808682.1;Parent=gene-C9F04_RS19345;Dbxref=Genbank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9F04_RS19345;product=septation protein A;protein_id=WP_000808682.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	9012	9413	.	+	.	ID=gene-C9F04_RS19350;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9F04_RS19350;old_locus_tag=C9F04_19980
NZ_PYKF01000635.1	Protein Homology	CDS	9012	9413	.	+	0	ID=cds-WP_000210317.1;Parent=gene-C9F04_RS19350;Dbxref=Genbank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9F04_RS19350;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	9473	10195	.	-	.	ID=gene-C9F04_RS19355;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9F04_RS19355;old_locus_tag=C9F04_19985
NZ_PYKF01000635.1	Protein Homology	CDS	9473	10195	.	-	0	ID=cds-WP_146713045.1;Parent=gene-C9F04_RS19355;Dbxref=Genbank:WP_146713045.1;Name=WP_146713045.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9F04_RS19355;product=TonB system transport protein TonB;protein_id=WP_146713045.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	10419	10715	.	+	.	ID=gene-C9F04_RS19360;Name=C9F04_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19360;old_locus_tag=C9F04_19990
NZ_PYKF01000635.1	Protein Homology	CDS	10419	10715	.	+	0	ID=cds-WP_000967605.1;Parent=gene-C9F04_RS19360;Dbxref=Genbank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9F04_RS19360;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	10759	10932	.	-	.	ID=gene-C9F04_RS19365;Name=C9F04_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19365
NZ_PYKF01000635.1	Protein Homology	CDS	10759	10932	.	-	0	ID=cds-WP_001531561.1;Parent=gene-C9F04_RS19365;Dbxref=Genbank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9F04_RS19365;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	11075	12535	.	+	.	ID=gene-C9F04_RS19370;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9F04_RS19370;old_locus_tag=C9F04_19995
NZ_PYKF01000635.1	Protein Homology	CDS	11075	12535	.	+	0	ID=cds-WP_146713041.1;Parent=gene-C9F04_RS19370;Dbxref=Genbank:WP_146713041.1;Name=WP_146713041.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9F04_RS19370;product=cardiolipin synthase;protein_id=WP_146713041.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	12569	12898	.	+	.	ID=gene-C9F04_RS19375;Name=C9F04_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19375;old_locus_tag=C9F04_20000
NZ_PYKF01000635.1	Protein Homology	CDS	12569	12898	.	+	0	ID=cds-WP_000425070.1;Parent=gene-C9F04_RS19375;Dbxref=Genbank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9F04_RS19375;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	12946	13782	.	-	.	ID=gene-C9F04_RS19380;Name=C9F04_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19380;old_locus_tag=C9F04_20005
NZ_PYKF01000635.1	Protein Homology	CDS	12946	13782	.	-	0	ID=cds-WP_000059071.1;Parent=gene-C9F04_RS19380;Dbxref=Genbank:WP_000059071.1;Name=WP_000059071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9F04_RS19380;product=ion transporter;protein_id=WP_000059071.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	13830	14834	.	-	.	ID=gene-C9F04_RS19385;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9F04_RS19385;old_locus_tag=C9F04_20010
NZ_PYKF01000635.1	Protein Homology	CDS	13830	14834	.	-	0	ID=cds-WP_146713042.1;Parent=gene-C9F04_RS19385;Dbxref=Genbank:WP_146713042.1;Name=WP_146713042.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9F04_RS19385;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_146713042.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	14831	15838	.	-	.	ID=gene-C9F04_RS19390;Name=C9F04_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19390;old_locus_tag=C9F04_20015
NZ_PYKF01000635.1	Protein Homology	CDS	14831	15838	.	-	0	ID=cds-WP_146713043.1;Parent=gene-C9F04_RS19390;Dbxref=Genbank:WP_146713043.1;Name=WP_146713043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9F04_RS19390;product=ABC transporter ATP-binding protein;protein_id=WP_146713043.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	15850	16758	.	-	.	ID=gene-C9F04_RS19395;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9F04_RS19395;old_locus_tag=C9F04_20020
NZ_PYKF01000635.1	Protein Homology	CDS	15850	16758	.	-	0	ID=cds-WP_000979653.1;Parent=gene-C9F04_RS19395;Dbxref=Genbank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9F04_RS19395;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	16773	17693	.	-	.	ID=gene-C9F04_RS19400;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9F04_RS19400;old_locus_tag=C9F04_20025
NZ_PYKF01000635.1	Protein Homology	CDS	16773	17693	.	-	0	ID=cds-WP_000911097.1;Parent=gene-C9F04_RS19400;Dbxref=Genbank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9F04_RS19400;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	17815	19446	.	-	.	ID=gene-C9F04_RS19405;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9F04_RS19405;old_locus_tag=C9F04_20030
NZ_PYKF01000635.1	Protein Homology	CDS	17815	19446	.	-	0	ID=cds-WP_001521098.1;Parent=gene-C9F04_RS19405;Dbxref=Genbank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=C9F04_RS19405;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	20210	20857	.	-	.	ID=gene-C9F04_RS19410;Name=C9F04_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19410;old_locus_tag=C9F04_20040
NZ_PYKF01000635.1	Protein Homology	CDS	20210	20857	.	-	0	ID=cds-WP_000615840.1;Parent=gene-C9F04_RS19410;Dbxref=Genbank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9F04_RS19410;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	21334	24012	.	+	.	ID=gene-C9F04_RS19415;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=C9F04_RS19415;old_locus_tag=C9F04_20045
NZ_PYKF01000635.1	Protein Homology	CDS	21334	24012	.	+	0	ID=cds-WP_000301689.1;Parent=gene-C9F04_RS19415;Dbxref=Genbank:WP_000301689.1;Name=WP_000301689.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9F04_RS19415;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301689.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	24209	24826	.	-	.	ID=gene-C9F04_RS19420;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9F04_RS19420;old_locus_tag=C9F04_20050
NZ_PYKF01000635.1	Protein Homology	CDS	24209	24826	.	-	0	ID=cds-WP_000068097.1;Parent=gene-C9F04_RS19420;Dbxref=Genbank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9F04_RS19420;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	25489	25902	.	+	.	ID=gene-C9F04_RS19425;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9F04_RS19425;old_locus_tag=C9F04_20055
NZ_PYKF01000635.1	Protein Homology	CDS	25489	25902	.	+	0	ID=cds-WP_001287383.1;Parent=gene-C9F04_RS19425;Dbxref=Genbank:WP_001287383.1;Name=WP_001287383.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9F04_RS19425;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_001287383.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	26034	26942	.	-	.	ID=gene-C9F04_RS19430;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9F04_RS19430;old_locus_tag=C9F04_20060
NZ_PYKF01000635.1	Protein Homology	CDS	26034	26942	.	-	0	ID=cds-WP_135369082.1;Parent=gene-C9F04_RS19430;Dbxref=Genbank:WP_135369082.1;Name=WP_135369082.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9F04_RS19430;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_135369082.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	27145	28158	.	-	.	ID=gene-C9F04_RS19435;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9F04_RS19435;old_locus_tag=C9F04_20065
NZ_PYKF01000635.1	Protein Homology	CDS	27145	28158	.	-	0	ID=cds-WP_000193432.1;Parent=gene-C9F04_RS19435;Dbxref=Genbank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9F04_RS19435;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	28249	29154	.	-	.	ID=gene-C9F04_RS19440;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9F04_RS19440;old_locus_tag=C9F04_20070
NZ_PYKF01000635.1	Protein Homology	CDS	28249	29154	.	-	0	ID=cds-WP_001230575.1;Parent=gene-C9F04_RS19440;Dbxref=Genbank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9F04_RS19440;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	29265	29723	.	+	.	ID=gene-C9F04_RS19445;Name=C9F04_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19445;old_locus_tag=C9F04_20075
NZ_PYKF01000635.1	Protein Homology	CDS	29265	29723	.	+	0	ID=cds-WP_001540172.1;Parent=gene-C9F04_RS19445;Dbxref=Genbank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9F04_RS19445;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	29774	30616	.	+	.	ID=gene-C9F04_RS19450;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9F04_RS19450;old_locus_tag=C9F04_20080
NZ_PYKF01000635.1	Protein Homology	CDS	29774	30616	.	+	0	ID=cds-WP_001191156.1;Parent=gene-C9F04_RS19450;Dbxref=Genbank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9F04_RS19450;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	30787	30928	.	+	.	ID=gene-C9F04_RS19455;Name=C9F04_RS19455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS19455;old_locus_tag=C9F04_20085
NZ_PYKF01000635.1	cmsearch	ncRNA	30787	30928	.	+	.	ID=rna-C9F04_RS19455;Parent=gene-C9F04_RS19455;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19455;product=RtT sRNA
NZ_PYKF01000635.1	cmsearch	exon	30787	30928	.	+	.	ID=exon-C9F04_RS19455-1;Parent=rna-C9F04_RS19455;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19455;product=RtT sRNA
NZ_PYKF01000635.1	RefSeq	gene	30957	31041	.	+	.	ID=gene-C9F04_RS19460;Name=C9F04_RS19460;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS19460;old_locus_tag=C9F04_20090
NZ_PYKF01000635.1	tRNAscan-SE	tRNA	30957	31041	.	+	.	ID=rna-C9F04_RS19460;Parent=gene-C9F04_RS19460;anticodon=(pos:30991..30993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS19460;product=tRNA-Tyr
NZ_PYKF01000635.1	tRNAscan-SE	exon	30957	31041	.	+	.	ID=exon-C9F04_RS19460-1;Parent=rna-C9F04_RS19460;anticodon=(pos:30991..30993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS19460;product=tRNA-Tyr
NZ_PYKF01000635.1	RefSeq	gene	31085	31215	.	+	.	ID=gene-C9F04_RS19465;Name=C9F04_RS19465;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS19465;old_locus_tag=C9F04_20095
NZ_PYKF01000635.1	cmsearch	ncRNA	31085	31215	.	+	.	ID=rna-C9F04_RS19465;Parent=gene-C9F04_RS19465;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19465;product=RtT sRNA
NZ_PYKF01000635.1	cmsearch	exon	31085	31215	.	+	.	ID=exon-C9F04_RS19465-1;Parent=rna-C9F04_RS19465;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19465;product=RtT sRNA
NZ_PYKF01000635.1	RefSeq	gene	31266	31396	.	+	.	ID=gene-C9F04_RS19470;Name=C9F04_RS19470;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS19470;old_locus_tag=C9F04_20100
NZ_PYKF01000635.1	cmsearch	ncRNA	31266	31396	.	+	.	ID=rna-C9F04_RS19470;Parent=gene-C9F04_RS19470;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19470;product=RtT sRNA
NZ_PYKF01000635.1	cmsearch	exon	31266	31396	.	+	.	ID=exon-C9F04_RS19470-1;Parent=rna-C9F04_RS19470;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19470;product=RtT sRNA
NZ_PYKF01000635.1	RefSeq	gene	31447	31577	.	+	.	ID=gene-C9F04_RS19475;Name=C9F04_RS19475;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS19475;old_locus_tag=C9F04_20105
NZ_PYKF01000635.1	cmsearch	ncRNA	31447	31577	.	+	.	ID=rna-C9F04_RS19475;Parent=gene-C9F04_RS19475;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19475;product=RtT sRNA
NZ_PYKF01000635.1	cmsearch	exon	31447	31577	.	+	.	ID=exon-C9F04_RS19475-1;Parent=rna-C9F04_RS19475;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19475;product=RtT sRNA
NZ_PYKF01000635.1	RefSeq	gene	31680	33209	.	-	.	ID=gene-C9F04_RS19480;Name=C9F04_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19480;old_locus_tag=C9F04_20110
NZ_PYKF01000635.1	Protein Homology	CDS	31680	33209	.	-	0	ID=cds-WP_135369435.1;Parent=gene-C9F04_RS19480;Dbxref=Genbank:WP_135369435.1;Name=WP_135369435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9F04_RS19480;product=sel1 repeat family protein;protein_id=WP_135369435.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	33451	34128	.	-	.	ID=gene-C9F04_RS19485;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F04_RS19485;old_locus_tag=C9F04_20120
NZ_PYKF01000635.1	Protein Homology	CDS	33451	34128	.	-	0	ID=cds-WP_000545594.1;Parent=gene-C9F04_RS19485;Dbxref=Genbank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9F04_RS19485;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	34128	34838	.	-	.	ID=gene-C9F04_RS19490;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9F04_RS19490;old_locus_tag=C9F04_20125
NZ_PYKF01000635.1	Protein Homology	CDS	34128	34838	.	-	0	ID=cds-WP_000571668.1;Parent=gene-C9F04_RS19490;Dbxref=Genbank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9F04_RS19490;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11
NZ_PYKF01000635.1	RefSeq	gene	34835	35830	.	-	.	ID=gene-C9F04_RS19495;Name=narH;end_range=35830,.;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F04_RS19495;old_locus_tag=C9F04_20130;partial=true
NZ_PYKF01000635.1	Protein Homology	CDS	34835	35830	.	-	0	ID=cds-WP_146713044.1;Parent=gene-C9F04_RS19495;Dbxref=Genbank:WP_146713044.1;Name=WP_146713044.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;end_range=35830,.;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9F04_RS19495;partial=true;product=nitrate reductase subunit beta;protein_id=WP_146713044.1;transl_table=11
##sequence-region NZ_PYKF01000407.1 1 1542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000407.1	RefSeq	region	1	1542	.	+	.	ID=NZ_PYKF01000407.1:1..1542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000407.1	RefSeq	pseudogene	1	398	.	+	.	ID=gene-C9F04_RS12040;Name=C9F04_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12040;old_locus_tag=C9F04_12455;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000407.1	Protein Homology	CDS	1	398	.	+	2	ID=cds-C9F04_RS12040;Parent=gene-C9F04_RS12040;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709978.1;locus_tag=C9F04_RS12040;partial=true;product=BamA/TamA family outer membrane protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000407.1	RefSeq	pseudogene	395	1542	.	+	.	ID=gene-C9F04_RS12045;Name=tamB;end_range=1542,.;gbkey=Gene;gene=tamB;gene_biotype=pseudogene;locus_tag=C9F04_RS12045;old_locus_tag=C9F04_12460;partial=true;pseudo=true
NZ_PYKF01000407.1	Protein Homology	CDS	395	1542	.	+	0	ID=cds-C9F04_RS12045;Parent=gene-C9F04_RS12045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1542,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F04_RS12045;partial=true;product=autotransporter assembly complex protein TamB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000805.1 1 1542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000805.1	RefSeq	region	1	1542	.	+	.	ID=NZ_PYKF01000805.1:1..1542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000805.1	RefSeq	gene	1	1204	.	-	.	ID=gene-C9F04_RS25175;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9F04_RS25175;old_locus_tag=C9F04_26040;partial=true;start_range=.,1
NZ_PYKF01000805.1	Protein Homology	CDS	1	1204	.	-	0	ID=cds-WP_146713337.1;Parent=gene-C9F04_RS25175;Dbxref=Genbank:WP_146713337.1;Name=WP_146713337.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9F04_RS25175;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=WP_146713337.1;start_range=.,1;transl_table=11
NZ_PYKF01000805.1	RefSeq	gene	1208	1542	.	-	.	ID=gene-C9F04_RS25180;Name=tssJ;end_range=1542,.;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9F04_RS25180;old_locus_tag=C9F04_26045;partial=true
NZ_PYKF01000805.1	Protein Homology	CDS	1208	1542	.	-	2	ID=cds-WP_146713338.1;Parent=gene-C9F04_RS25180;Dbxref=Genbank:WP_146713338.1;Name=WP_146713338.1;Ontology_term=GO:0033103,GO:0003674;end_range=1542,.;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001045932.1;locus_tag=C9F04_RS25180;partial=true;product=type VI secretion system lipoprotein TssJ;protein_id=WP_146713338.1;transl_table=11
##sequence-region NZ_PYKF01000732.1 1 1541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000732.1	RefSeq	region	1	1541	.	+	.	ID=NZ_PYKF01000732.1:1..1541;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000732.1	RefSeq	gene	1	1067	.	-	.	ID=gene-C9F04_RS22725;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9F04_RS22725;old_locus_tag=C9F04_23485;partial=true;start_range=.,1
NZ_PYKF01000732.1	Protein Homology	CDS	1	1067	.	-	0	ID=cds-WP_146713218.1;Parent=gene-C9F04_RS22725;Dbxref=Genbank:WP_146713218.1;Name=WP_146713218.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9F04_RS22725;partial=true;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_146713218.1;start_range=.,1;transl_table=11
NZ_PYKF01000732.1	RefSeq	gene	1064	1541	.	-	.	ID=gene-C9F04_RS22730;Name=C9F04_RS22730;end_range=1541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22730;old_locus_tag=C9F04_23490;partial=true
NZ_PYKF01000732.1	Protein Homology	CDS	1064	1541	.	-	1	ID=cds-WP_146713219.1;Parent=gene-C9F04_RS22730;Dbxref=Genbank:WP_146713219.1;Name=WP_146713219.1;end_range=1541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128032.1;locus_tag=C9F04_RS22730;partial=true;product=heme-binding protein;protein_id=WP_146713219.1;transl_table=11
##sequence-region NZ_PYKF01000580.1 1 1539
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000580.1	RefSeq	region	1	1539	.	+	.	ID=NZ_PYKF01000580.1:1..1539;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000580.1	RefSeq	gene	1	695	.	+	.	ID=gene-C9F04_RS17305;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9F04_RS17305;old_locus_tag=C9F04_17865;partial=true;start_range=.,1
NZ_PYKF01000580.1	Protein Homology	CDS	1	695	.	+	2	ID=cds-WP_146712936.1;Parent=gene-C9F04_RS17305;Dbxref=Genbank:WP_146712936.1;Name=WP_146712936.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964116.1;locus_tag=C9F04_RS17305;partial=true;product=methylisocitrate lyase;protein_id=WP_146712936.1;start_range=.,1;transl_table=11
NZ_PYKF01000580.1	RefSeq	pseudogene	818	1539	.	+	.	ID=gene-C9F04_RS17310;Name=C9F04_RS17310;end_range=1539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17310;old_locus_tag=C9F04_17870;partial=true;pseudo=true
NZ_PYKF01000580.1	Protein Homology	CDS	818	1539	.	+	0	ID=cds-C9F04_RS17310;Parent=gene-C9F04_RS17310;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9F04_RS17310;partial=true;product=2-methylcitrate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000202.1 1 1531
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000202.1	RefSeq	region	1	1531	.	+	.	ID=NZ_PYKF01000202.1:1..1531;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000202.1	RefSeq	pseudogene	35	694	.	+	.	ID=gene-C9F04_RS04800;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=pseudogene;locus_tag=C9F04_RS04800;old_locus_tag=C9F04_04960;partial=true;pseudo=true;start_range=.,35
NZ_PYKF01000202.1	Protein Homology	CDS	35	694	.	+	0	ID=cds-C9F04_RS04800;Parent=gene-C9F04_RS04800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9F04_RS04800;partial=true;product=aromatic amino acid efflux DMT transporter YddG;pseudo=true;start_range=.,35;transl_table=11
NZ_PYKF01000202.1	RefSeq	pseudogene	1219	1531	.	+	.	ID=gene-C9F04_RS04805;Name=ompD;end_range=1531,.;gbkey=Gene;gene=ompD;gene_biotype=pseudogene;locus_tag=C9F04_RS04805;old_locus_tag=C9F04_04970;partial=true;pseudo=true
NZ_PYKF01000202.1	Protein Homology	CDS	1219	1531	.	+	0	ID=cds-C9F04_RS04805;Parent=gene-C9F04_RS04805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1531,.;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F04_RS04805;partial=true;product=porin OmpD;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000519.1 1 1524
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000519.1	RefSeq	region	1	1524	.	+	.	ID=NZ_PYKF01000519.1:1..1524;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000519.1	RefSeq	gene	1	150	.	+	.	ID=gene-C9F04_RS15520;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9F04_RS15520;old_locus_tag=C9F04_16010;partial=true;start_range=.,1
NZ_PYKF01000519.1	Protein Homology	CDS	1	150	.	+	0	ID=cds-WP_261771263.1;Parent=gene-C9F04_RS15520;Dbxref=Genbank:WP_261771263.1;Name=WP_261771263.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9F04_RS15520;partial=true;product=exopolysaccharide production protein YjbE;protein_id=WP_261771263.1;start_range=.,1;transl_table=11
NZ_PYKF01000519.1	RefSeq	gene	214	852	.	+	.	ID=gene-C9F04_RS15525;Name=C9F04_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15525;old_locus_tag=C9F04_16015
NZ_PYKF01000519.1	Protein Homology	CDS	214	852	.	+	0	ID=cds-WP_000824804.1;Parent=gene-C9F04_RS15525;Dbxref=Genbank:WP_000824804.1;Name=WP_000824804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9F04_RS15525;product=YjbF family lipoprotein;protein_id=WP_000824804.1;transl_table=11
NZ_PYKF01000519.1	RefSeq	pseudogene	849	1388	.	+	.	ID=gene-C9F04_RS15530;Name=C9F04_RS15530;end_range=1388,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15530;old_locus_tag=C9F04_16020;partial=true;pseudo=true
NZ_PYKF01000519.1	Protein Homology	CDS	849	1388	.	+	0	ID=cds-C9F04_RS15530;Parent=gene-C9F04_RS15530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9F04_RS15530;partial=true;product=capsule biosynthesis GfcC family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000669.1 1 1513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000669.1	RefSeq	region	1	1513	.	+	.	ID=NZ_PYKF01000669.1:1..1513;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000669.1	RefSeq	gene	88	510	.	+	.	ID=gene-C9F04_RS20465;Name=C9F04_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20465;old_locus_tag=C9F04_21130
NZ_PYKF01000669.1	Protein Homology	CDS	88	510	.	+	0	ID=cds-WP_146713092.1;Parent=gene-C9F04_RS20465;Dbxref=Genbank:WP_146713092.1;Name=WP_146713092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565137.1;locus_tag=C9F04_RS20465;product=GDP-mannose mannosyl hydrolase;protein_id=WP_146713092.1;transl_table=11
NZ_PYKF01000669.1	RefSeq	gene	507	1513	.	+	.	ID=gene-C9F04_RS20470;Name=wcaI;end_range=1513,.;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=C9F04_RS20470;old_locus_tag=C9F04_21135;partial=true
NZ_PYKF01000669.1	Protein Homology	CDS	507	1513	.	+	0	ID=cds-WP_146713093.1;Parent=gene-C9F04_RS20470;Dbxref=Genbank:WP_146713093.1;Name=WP_146713093.1;end_range=1513,.;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9F04_RS20470;partial=true;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_146713093.1;transl_table=11
##sequence-region NZ_PYKF01000190.1 1 1505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000190.1	RefSeq	region	1	1505	.	+	.	ID=NZ_PYKF01000190.1:1..1505;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000190.1	RefSeq	gene	1	787	.	-	.	ID=gene-C9F04_RS04425;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9F04_RS04425;old_locus_tag=C9F04_04565;partial=true;start_range=.,1
NZ_PYKF01000190.1	Protein Homology	CDS	1	787	.	-	0	ID=cds-WP_146712333.1;Parent=gene-C9F04_RS04425;Dbxref=Genbank:WP_146712333.1;Name=WP_146712333.1;Ontology_term=GO:0055085,GO:0015209,GO:0016021;gbkey=CDS;gene=codB;go_component=integral component of membrane|0016021||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9F04_RS04425;partial=true;product=cytosine permease;protein_id=WP_146712333.1;start_range=.,1;transl_table=11
NZ_PYKF01000190.1	RefSeq	gene	904	1505	.	-	.	ID=gene-C9F04_RS04430;Name=C9F04_RS04430;end_range=1505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04430;old_locus_tag=C9F04_04570;partial=true
NZ_PYKF01000190.1	Protein Homology	CDS	904	1505	.	-	2	ID=cds-WP_146712334.1;Parent=gene-C9F04_RS04430;Dbxref=Genbank:WP_146712334.1;Name=WP_146712334.1;end_range=1505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9F04_RS04430;partial=true;product=DUF1016 domain-containing protein;protein_id=WP_146712334.1;transl_table=11
##sequence-region NZ_PYKF01000250.1 1 1496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000250.1	RefSeq	region	1	1496	.	+	.	ID=NZ_PYKF01000250.1:1..1496;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000250.1	RefSeq	gene	1	543	.	+	.	ID=gene-C9F04_RS06845;Name=C9F04_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06845;old_locus_tag=C9F04_07070;partial=true;start_range=.,1
NZ_PYKF01000250.1	Protein Homology	CDS	1	543	.	+	0	ID=cds-WP_146712444.1;Parent=gene-C9F04_RS06845;Dbxref=Genbank:WP_146712444.1;Name=WP_146712444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707416.2;locus_tag=C9F04_RS06845;partial=true;product=electron transfer flavoprotein;protein_id=WP_146712444.1;start_range=.,1;transl_table=11
NZ_PYKF01000250.1	RefSeq	gene	565	1496	.	+	.	ID=gene-C9F04_RS06850;Name=C9F04_RS06850;end_range=1496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06850;old_locus_tag=C9F04_07075;partial=true
NZ_PYKF01000250.1	Protein Homology	CDS	565	1496	.	+	0	ID=cds-WP_001015883.1;Parent=gene-C9F04_RS06850;Dbxref=Genbank:WP_001015883.1;Name=WP_001015883.1;end_range=1496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9F04_RS06850;partial=true;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015883.1;transl_table=11
##sequence-region NZ_PYKF01000341.1 1 1491
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000341.1	RefSeq	region	1	1491	.	+	.	ID=NZ_PYKF01000341.1:1..1491;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000341.1	RefSeq	pseudogene	8	427	.	+	.	ID=gene-C9F04_RS10005;Name=C9F04_RS10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10005;old_locus_tag=C9F04_10325;partial=true;pseudo=true;start_range=.,8
NZ_PYKF01000341.1	Protein Homology	CDS	8	427	.	+	0	ID=cds-C9F04_RS10005;Parent=gene-C9F04_RS10005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9F04_RS10005;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;start_range=.,8;transl_table=11
NZ_PYKF01000341.1	RefSeq	gene	448	1251	.	-	.	ID=gene-C9F04_RS10010;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9F04_RS10010;old_locus_tag=C9F04_10330
NZ_PYKF01000341.1	Protein Homology	CDS	448	1251	.	-	0	ID=cds-WP_135369478.1;Parent=gene-C9F04_RS10010;Dbxref=Genbank:WP_135369478.1;Name=WP_135369478.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9F04_RS10010;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_135369478.1;transl_table=11
##sequence-region NZ_PYKF01000521.1 1 16172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000521.1	RefSeq	region	1	16172	.	+	.	ID=NZ_PYKF01000521.1:1..16172;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000521.1	RefSeq	gene	1	131	.	+	.	ID=gene-C9F04_RS27100;Name=C9F04_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27100;partial=true;start_range=.,1
NZ_PYKF01000521.1	Protein Homology	CDS	1	131	.	+	2	ID=cds-WP_072195473.1;Parent=gene-C9F04_RS27100;Dbxref=Genbank:WP_072195473.1;Name=WP_072195473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9F04_RS27100;partial=true;product=hexuronate transporter ExuT;protein_id=WP_072195473.1;start_range=.,1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	527	1405	.	+	.	ID=gene-C9F04_RS15550;Name=C9F04_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15550;old_locus_tag=C9F04_16040
NZ_PYKF01000521.1	Protein Homology	CDS	527	1405	.	+	0	ID=cds-WP_031604978.1;Parent=gene-C9F04_RS15550;Dbxref=Genbank:WP_031604978.1;Name=WP_031604978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9F04_RS15550;product=carbon-nitrogen hydrolase family protein;protein_id=WP_031604978.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	1444	2367	.	+	.	ID=gene-C9F04_RS15555;Name=C9F04_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15555;old_locus_tag=C9F04_16045
NZ_PYKF01000521.1	Protein Homology	CDS	1444	2367	.	+	0	ID=cds-WP_000540891.1;Parent=gene-C9F04_RS15555;Dbxref=Genbank:WP_000540891.1;Name=WP_000540891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9F04_RS15555;product=polysaccharide deacetylase;protein_id=WP_000540891.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	3093	3578	.	+	.	ID=gene-C9F04_RS15560;Name=C9F04_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15560;old_locus_tag=C9F04_16050
NZ_PYKF01000521.1	Protein Homology	CDS	3093	3578	.	+	0	ID=cds-WP_135369721.1;Parent=gene-C9F04_RS15560;Dbxref=Genbank:WP_135369721.1;Name=WP_135369721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9F04_RS15560;product=Hcp family type VI secretion system effector;protein_id=WP_135369721.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	3578	3958	.	+	.	ID=gene-C9F04_RS15565;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9F04_RS15565;old_locus_tag=C9F04_16055
NZ_PYKF01000521.1	Protein Homology	CDS	3578	3958	.	+	0	ID=cds-WP_000988938.1;Parent=gene-C9F04_RS15565;Dbxref=Genbank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9F04_RS15565;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	4094	5578	.	-	.	ID=gene-C9F04_RS15570;Name=C9F04_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15570;old_locus_tag=C9F04_16060
NZ_PYKF01000521.1	Protein Homology	CDS	4094	5578	.	-	0	ID=cds-WP_146712846.1;Parent=gene-C9F04_RS15570;Dbxref=Genbank:WP_146712846.1;Name=WP_146712846.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9F04_RS15570;product=aldehyde dehydrogenase family protein;protein_id=WP_146712846.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	5740	7041	.	+	.	ID=gene-C9F04_RS15575;Name=C9F04_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15575;old_locus_tag=C9F04_16065
NZ_PYKF01000521.1	Protein Homology	CDS	5740	7041	.	+	0	ID=cds-WP_001092827.1;Parent=gene-C9F04_RS15575;Dbxref=Genbank:WP_001092827.1;Name=WP_001092827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9F04_RS15575;product=FAD-binding oxidoreductase;protein_id=WP_001092827.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	7056	7430	.	+	.	ID=gene-C9F04_RS15580;Name=C9F04_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15580;old_locus_tag=C9F04_16070
NZ_PYKF01000521.1	Protein Homology	CDS	7056	7430	.	+	0	ID=cds-WP_000542980.1;Parent=gene-C9F04_RS15580;Dbxref=Genbank:WP_000542980.1;Name=WP_000542980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9F04_RS15580;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	7639	9138	.	+	.	ID=gene-C9F04_RS15585;Name=C9F04_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15585;old_locus_tag=C9F04_16075
NZ_PYKF01000521.1	Protein Homology	CDS	7639	9138	.	+	0	ID=cds-WP_146712847.1;Parent=gene-C9F04_RS15585;Dbxref=Genbank:WP_146712847.1;Name=WP_146712847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9F04_RS15585;product=APC family permease;protein_id=WP_146712847.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	9116	9673	.	+	.	ID=gene-C9F04_RS15590;Name=C9F04_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15590;old_locus_tag=C9F04_16080
NZ_PYKF01000521.1	Protein Homology	CDS	9116	9673	.	+	0	ID=cds-WP_023237540.1;Parent=gene-C9F04_RS15590;Dbxref=Genbank:WP_023237540.1;Name=WP_023237540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9F04_RS15590;product=DUF3156 family protein;protein_id=WP_023237540.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	9778	10461	.	-	.	ID=gene-C9F04_RS15595;Name=C9F04_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15595;old_locus_tag=C9F04_16085
NZ_PYKF01000521.1	Protein Homology	CDS	9778	10461	.	-	0	ID=cds-WP_001275354.1;Parent=gene-C9F04_RS15595;Dbxref=Genbank:WP_001275354.1;Name=WP_001275354.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9F04_RS15595;product=LuxR family transcriptional regulator;protein_id=WP_001275354.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	11895	12545	.	-	.	ID=gene-C9F04_RS15610;Name=C9F04_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15610;old_locus_tag=C9F04_16100
NZ_PYKF01000521.1	Protein Homology	CDS	11895	12545	.	-	0	ID=cds-WP_039518521.1;Parent=gene-C9F04_RS15610;Dbxref=Genbank:WP_039518521.1;Name=WP_039518521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724403.1;locus_tag=C9F04_RS15610;product=hypothetical protein;protein_id=WP_039518521.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	12523	13047	.	-	.	ID=gene-C9F04_RS15615;Name=C9F04_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15615;old_locus_tag=C9F04_16105
NZ_PYKF01000521.1	Protein Homology	CDS	12523	13047	.	-	0	ID=cds-WP_001805649.1;Parent=gene-C9F04_RS15615;Dbxref=Genbank:WP_001805649.1;Name=WP_001805649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504929.1;locus_tag=C9F04_RS15615;product=DUF943 family protein;protein_id=WP_001805649.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	pseudogene	13250	13471	.	-	.	ID=gene-C9F04_RS27105;Name=C9F04_RS27105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27105;old_locus_tag=C9F04_16110;pseudo=true
NZ_PYKF01000521.1	Protein Homology	CDS	13250	13471	.	-	0	ID=cds-C9F04_RS27105;Parent=gene-C9F04_RS27105;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023120.2;locus_tag=C9F04_RS27105;product=DUF3289 family protein;pseudo=true;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	13693	14196	.	-	.	ID=gene-C9F04_RS15630;Name=C9F04_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15630;old_locus_tag=C9F04_16115
NZ_PYKF01000521.1	Protein Homology	CDS	13693	14196	.	-	0	ID=cds-WP_135420218.1;Parent=gene-C9F04_RS15630;Dbxref=Genbank:WP_135420218.1;Name=WP_135420218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151807.1;locus_tag=C9F04_RS15630;product=hypothetical protein;protein_id=WP_135420218.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	14585	14863	.	-	.	ID=gene-C9F04_RS15635;Name=C9F04_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15635;old_locus_tag=C9F04_16120
NZ_PYKF01000521.1	Protein Homology	CDS	14585	14863	.	-	0	ID=cds-WP_000421096.1;Parent=gene-C9F04_RS15635;Dbxref=Genbank:WP_000421096.1;Name=WP_000421096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729069.1;locus_tag=C9F04_RS15635;product=bacteriocin immunity protein;protein_id=WP_000421096.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	15106	15372	.	-	.	ID=gene-C9F04_RS15645;Name=C9F04_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15645;old_locus_tag=C9F04_16130
NZ_PYKF01000521.1	Protein Homology	CDS	15106	15372	.	-	0	ID=cds-WP_000768133.1;Parent=gene-C9F04_RS15645;Dbxref=Genbank:WP_000768133.1;Name=WP_000768133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768133.1;locus_tag=C9F04_RS15645;product=bacteriocin immunity protein;protein_id=WP_000768133.1;transl_table=11
NZ_PYKF01000521.1	RefSeq	gene	15369	15686	.	-	.	ID=gene-C9F04_RS15650;Name=C9F04_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15650;old_locus_tag=C9F04_16135
NZ_PYKF01000521.1	Protein Homology	CDS	15369	15686	.	-	0	ID=cds-WP_135369526.1;Parent=gene-C9F04_RS15650;Dbxref=Genbank:WP_135369526.1;Name=WP_135369526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141621.1;locus_tag=C9F04_RS15650;product=PAAR domain-containing protein;protein_id=WP_135369526.1;transl_table=11
##sequence-region NZ_PYKF01000721.1 1 1488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000721.1	RefSeq	region	1	1488	.	+	.	ID=NZ_PYKF01000721.1:1..1488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000721.1	RefSeq	gene	1	1488	.	-	.	ID=gene-C9F04_RS22380;Name=C9F04_RS22380;end_range=1488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22380;old_locus_tag=C9F04_23120;partial=true;start_range=.,1
NZ_PYKF01000721.1	Protein Homology	CDS	1	1488	.	-	0	ID=cds-WP_186799078.1;Parent=gene-C9F04_RS22380;Dbxref=Genbank:WP_186799078.1;Name=WP_186799078.1;end_range=1488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F04_RS22380;partial=true;product=Ig-like domain-containing protein;protein_id=WP_186799078.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000391.1 1 1472
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000391.1	RefSeq	region	1	1472	.	+	.	ID=NZ_PYKF01000391.1:1..1472;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000391.1	RefSeq	pseudogene	1	948	.	+	.	ID=gene-C9F04_RS11500;Name=C9F04_RS11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11500;old_locus_tag=C9F04_11885;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000391.1	Protein Homology	CDS	1	948	.	+	0	ID=cds-C9F04_RS11500;Parent=gene-C9F04_RS11500;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033733.1;locus_tag=C9F04_RS11500;partial=true;product=iron ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000026.1 1 1456
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000026.1	RefSeq	region	1	1456	.	+	.	ID=NZ_PYKF01000026.1:1..1456;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000026.1	RefSeq	pseudogene	1	804	.	+	.	ID=gene-C9F04_RS00360;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=pseudogene;locus_tag=C9F04_RS00360;old_locus_tag=C9F04_00390;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000026.1	Protein Homology	CDS	1	804	.	+	0	ID=cds-C9F04_RS00360;Parent=gene-C9F04_RS00360;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9F04_RS00360;partial=true;product=beta-barrel assembly-enhancing protease;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000026.1	RefSeq	gene	844	1203	.	+	.	ID=gene-C9F04_RS00365;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9F04_RS00365;old_locus_tag=C9F04_00395
NZ_PYKF01000026.1	Protein Homology	CDS	844	1203	.	+	0	ID=cds-WP_000132650.1;Parent=gene-C9F04_RS00365;Dbxref=Genbank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9F04_RS00365;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11
NZ_PYKF01000026.1	RefSeq	pseudogene	1230	1456	.	-	.	ID=gene-C9F04_RS00370;Name=C9F04_RS00370;end_range=1456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00370;old_locus_tag=C9F04_00400;partial=true;pseudo=true
NZ_PYKF01000026.1	Protein Homology	CDS	1230	1456	.	-	2	ID=cds-C9F04_RS00370;Parent=gene-C9F04_RS00370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9F04_RS00370;partial=true;product=DnaA inactivator Hda;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000084.1 1 1443
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000084.1	RefSeq	region	1	1443	.	+	.	ID=NZ_PYKF01000084.1:1..1443;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000084.1	RefSeq	gene	1	258	.	-	.	ID=gene-C9F04_RS01655;Name=C9F04_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01655;old_locus_tag=C9F04_01725;partial=true;start_range=.,1
NZ_PYKF01000084.1	Protein Homology	CDS	1	258	.	-	0	ID=cds-WP_186798980.1;Parent=gene-C9F04_RS01655;Dbxref=Genbank:WP_186798980.1;Name=WP_186798980.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461613.1;locus_tag=C9F04_RS01655;partial=true;product=NAD(+)/NADH kinase;protein_id=WP_186798980.1;start_range=.,1;transl_table=11
NZ_PYKF01000084.1	RefSeq	gene	381	971	.	+	.	ID=gene-C9F04_RS01660;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9F04_RS01660;old_locus_tag=C9F04_01735
NZ_PYKF01000084.1	Protein Homology	CDS	381	971	.	+	0	ID=cds-WP_001518875.1;Parent=gene-C9F04_RS01660;Dbxref=Genbank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9F04_RS01660;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11
NZ_PYKF01000084.1	RefSeq	gene	1006	1443	.	-	.	ID=gene-C9F04_RS01665;Name=C9F04_RS01665;end_range=1443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01665;old_locus_tag=C9F04_01740;partial=true
NZ_PYKF01000084.1	Protein Homology	CDS	1006	1443	.	-	0	ID=cds-WP_146712204.1;Parent=gene-C9F04_RS01665;Dbxref=Genbank:WP_146712204.1;Name=WP_146712204.1;end_range=1443,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9F04_RS01665;partial=true;product=cytoplasmic protein;protein_id=WP_146712204.1;transl_table=11
##sequence-region NZ_PYKF01000668.1 1 1439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000668.1	RefSeq	region	1	1439	.	+	.	ID=NZ_PYKF01000668.1:1..1439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000668.1	RefSeq	pseudogene	23	1159	.	-	.	ID=gene-C9F04_RS20455;Name=C9F04_RS20455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS20455;old_locus_tag=C9F04_21120;partial=true;pseudo=true;start_range=.,23
NZ_PYKF01000668.1	Protein Homology	CDS	23	1159	.	-	0	ID=cds-C9F04_RS20455;Parent=gene-C9F04_RS20455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9F04_RS20455;partial=true;product=PrpR N-terminal domain-containing protein;pseudo=true;start_range=.,23;transl_table=11
NZ_PYKF01000668.1	RefSeq	gene	1227	1439	.	-	.	ID=gene-C9F04_RS20460;Name=C9F04_RS20460;end_range=1439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20460;old_locus_tag=C9F04_21125;partial=true
NZ_PYKF01000668.1	Protein Homology	CDS	1227	1439	.	-	0	ID=cds-WP_186799064.1;Parent=gene-C9F04_RS20460;Dbxref=Genbank:WP_186799064.1;Name=WP_186799064.1;Ontology_term=GO:0008643,GO:0046411,GO:0015649,GO:0016021;end_range=1439,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=carbohydrate transport|0008643||IEA,2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9F04_RS20460;partial=true;product=2-keto-3-deoxygluconate permease;protein_id=WP_186799064.1;transl_table=11
##sequence-region NZ_PYKF01000046.1 1 1426
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000046.1	RefSeq	region	1	1426	.	+	.	ID=NZ_PYKF01000046.1:1..1426;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000046.1	RefSeq	pseudogene	1	609	.	-	.	ID=gene-C9F04_RS00840;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=C9F04_RS00840;old_locus_tag=C9F04_00895;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000046.1	Protein Homology	CDS	1	609	.	-	0	ID=cds-C9F04_RS00840;Parent=gene-C9F04_RS00840;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F04_RS00840;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000046.1	RefSeq	gene	640	960	.	-	.	ID=gene-C9F04_RS00845;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9F04_RS00845;old_locus_tag=C9F04_00900
NZ_PYKF01000046.1	Protein Homology	CDS	640	960	.	-	0	ID=cds-WP_000520789.1;Parent=gene-C9F04_RS00845;Dbxref=Genbank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9F04_RS00845;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11
NZ_PYKF01000046.1	RefSeq	gene	1056	1133	.	-	.	ID=gene-C9F04_RS26740;Name=C9F04_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26740
NZ_PYKF01000046.1	Protein Homology	CDS	1056	1133	.	-	0	ID=cds-WP_212742690.1;Parent=gene-C9F04_RS26740;Dbxref=Genbank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9F04_RS26740;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11
NZ_PYKF01000046.1	RefSeq	pseudogene	1284	1397	.	+	.	ID=gene-C9F04_RS00850;Name=C9F04_RS00850;end_range=1397,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00850;old_locus_tag=C9F04_00905;partial=true;pseudo=true
NZ_PYKF01000046.1	Protein Homology	CDS	1284	1397	.	+	0	ID=cds-C9F04_RS00850;Parent=gene-C9F04_RS00850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;end_range=1397,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9F04_RS00850;partial=true;product=cold shock domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000501.1 1 1426
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000501.1	RefSeq	region	1	1426	.	+	.	ID=NZ_PYKF01000501.1:1..1426;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000501.1	RefSeq	gene	1	1426	.	+	.	ID=gene-C9F04_RS15030;Name=C9F04_RS15030;end_range=1426,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15030;old_locus_tag=C9F04_15510;partial=true;start_range=.,1
NZ_PYKF01000501.1	Protein Homology	CDS	1	1426	.	+	1	ID=cds-WP_146712818.1;Parent=gene-C9F04_RS15030;Dbxref=Genbank:WP_146712818.1;Name=WP_146712818.1;Ontology_term=GO:0016032,GO:0005198;end_range=1426,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F04_RS15030;partial=true;product=phage tail tape measure protein;protein_id=WP_146712818.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000328.1 1 1425
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000328.1	RefSeq	region	1	1425	.	+	.	ID=NZ_PYKF01000328.1:1..1425;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000328.1	RefSeq	gene	1	1039	.	+	.	ID=gene-C9F04_RS09560;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9F04_RS09560;old_locus_tag=C9F04_09870;partial=true;start_range=.,1
NZ_PYKF01000328.1	Protein Homology	CDS	1	1039	.	+	1	ID=cds-WP_146712552.1;Parent=gene-C9F04_RS09560;Dbxref=Genbank:WP_146712552.1;Name=WP_146712552.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9F04_RS09560;partial=true;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_146712552.1;start_range=.,1;transl_table=11
NZ_PYKF01000328.1	RefSeq	pseudogene	1036	1425	.	+	.	ID=gene-C9F04_RS09565;Name=C9F04_RS09565;end_range=1425,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09565;old_locus_tag=C9F04_09875;partial=true;pseudo=true
NZ_PYKF01000328.1	Protein Homology	CDS	1036	1425	.	+	0	ID=cds-C9F04_RS09565;Parent=gene-C9F04_RS09565;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9F04_RS09565;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000314.1 1 1407
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000314.1	RefSeq	region	1	1407	.	+	.	ID=NZ_PYKF01000314.1:1..1407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000314.1	RefSeq	gene	9	767	.	+	.	ID=gene-C9F04_RS09250;Name=C9F04_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09250;old_locus_tag=C9F04_09555
NZ_PYKF01000314.1	Protein Homology	CDS	9	767	.	+	0	ID=cds-WP_000134800.1;Parent=gene-C9F04_RS09250;Dbxref=Genbank:WP_000134800.1;Name=WP_000134800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9F04_RS09250;product=transcriptional regulator;protein_id=WP_000134800.1;transl_table=11
NZ_PYKF01000314.1	RefSeq	gene	977	1407	.	-	.	ID=gene-C9F04_RS09255;Name=C9F04_RS09255;end_range=1407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09255;old_locus_tag=C9F04_09560;partial=true
NZ_PYKF01000314.1	Protein Homology	CDS	977	1407	.	-	2	ID=cds-WP_146712534.1;Parent=gene-C9F04_RS09255;Dbxref=Genbank:WP_146712534.1;Name=WP_146712534.1;Ontology_term=GO:0035444,GO:0015099;end_range=1407,.;gbkey=CDS;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F04_RS09255;partial=true;product=nickel/cobalt efflux transporter;protein_id=WP_146712534.1;transl_table=11
##sequence-region NZ_PYKF01000754.1 1 1397
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000754.1	RefSeq	region	1	1397	.	+	.	ID=NZ_PYKF01000754.1:1..1397;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000754.1	RefSeq	gene	264	1355	.	+	.	ID=gene-C9F04_RS23495;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9F04_RS23495;old_locus_tag=C9F04_24275
NZ_PYKF01000754.1	Protein Homology	CDS	264	1355	.	+	0	ID=cds-WP_000977709.1;Parent=gene-C9F04_RS23495;Dbxref=Genbank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9F04_RS23495;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11
##sequence-region NZ_PYKF01000236.1 1 16055
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000236.1	RefSeq	region	1	16055	.	+	.	ID=NZ_PYKF01000236.1:1..16055;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000236.1	RefSeq	gene	1	2265	.	+	.	ID=gene-C9F04_RS06260;Name=C9F04_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06260;old_locus_tag=C9F04_06460;partial=true;start_range=.,1
NZ_PYKF01000236.1	Protein Homology	CDS	1	2265	.	+	0	ID=cds-WP_146712419.1;Parent=gene-C9F04_RS06260;Dbxref=Genbank:WP_146712419.1;Name=WP_146712419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F04_RS06260;partial=true;product=fimbrial outer membrane usher protein;protein_id=WP_146712419.1;start_range=.,1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	2274	3350	.	+	.	ID=gene-C9F04_RS06265;Name=C9F04_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06265;old_locus_tag=C9F04_06465
NZ_PYKF01000236.1	Protein Homology	CDS	2274	3350	.	+	0	ID=cds-WP_146712420.1;Parent=gene-C9F04_RS06265;Dbxref=Genbank:WP_146712420.1;Name=WP_146712420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F04_RS06265;product=fimbrial protein;protein_id=WP_146712420.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	3470	4240	.	-	.	ID=gene-C9F04_RS06270;Name=C9F04_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06270;old_locus_tag=C9F04_06470
NZ_PYKF01000236.1	Protein Homology	CDS	3470	4240	.	-	0	ID=cds-WP_146712421.1;Parent=gene-C9F04_RS06270;Dbxref=Genbank:WP_146712421.1;Name=WP_146712421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F04_RS06270;product=ABC transporter permease;protein_id=WP_146712421.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	4237	5163	.	-	.	ID=gene-C9F04_RS06275;Name=C9F04_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06275;old_locus_tag=C9F04_06475
NZ_PYKF01000236.1	Protein Homology	CDS	4237	5163	.	-	0	ID=cds-WP_000150619.1;Parent=gene-C9F04_RS06275;Dbxref=Genbank:WP_000150619.1;Name=WP_000150619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9F04_RS06275;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	5272	5934	.	+	.	ID=gene-C9F04_RS06280;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9F04_RS06280;old_locus_tag=C9F04_06480
NZ_PYKF01000236.1	Protein Homology	CDS	5272	5934	.	+	0	ID=cds-WP_000651591.1;Parent=gene-C9F04_RS06280;Dbxref=Genbank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9F04_RS06280;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	5992	6528	.	-	.	ID=gene-C9F04_RS06285;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9F04_RS06285;old_locus_tag=C9F04_06485
NZ_PYKF01000236.1	Protein Homology	CDS	5992	6528	.	-	0	ID=cds-WP_000683343.1;Parent=gene-C9F04_RS06285;Dbxref=Genbank:WP_000683343.1;Name=WP_000683343.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9F04_RS06285;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683343.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	6734	9124	.	+	.	ID=gene-C9F04_RS06290;Name=C9F04_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06290;old_locus_tag=C9F04_06490
NZ_PYKF01000236.1	Protein Homology	CDS	6734	9124	.	+	0	ID=cds-WP_000829727.1;Parent=gene-C9F04_RS06290;Dbxref=Genbank:WP_000829727.1;Name=WP_000829727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9F04_RS06290;product=pyrroloquinoline quinone-dependent dehydrogenase;protein_id=WP_000829727.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	9216	10826	.	-	.	ID=gene-C9F04_RS06295;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9F04_RS06295;old_locus_tag=C9F04_06495
NZ_PYKF01000236.1	Protein Homology	CDS	9216	10826	.	-	0	ID=cds-WP_000946046.1;Parent=gene-C9F04_RS06295;Dbxref=Genbank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9F04_RS06295;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	11028	11375	.	+	.	ID=gene-C9F04_RS06300;Name=C9F04_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06300;old_locus_tag=C9F04_06500
NZ_PYKF01000236.1	Protein Homology	CDS	11028	11375	.	+	0	ID=cds-WP_000846613.1;Parent=gene-C9F04_RS06300;Dbxref=Genbank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9F04_RS06300;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	11482	12342	.	+	.	ID=gene-C9F04_RS06305;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9F04_RS06305;old_locus_tag=C9F04_06505
NZ_PYKF01000236.1	Protein Homology	CDS	11482	12342	.	+	0	ID=cds-WP_023209229.1;Parent=gene-C9F04_RS06305;Dbxref=Genbank:WP_023209229.1;Name=WP_023209229.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9F04_RS06305;product=polyamine aminopropyltransferase;protein_id=WP_023209229.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	12363	13157	.	+	.	ID=gene-C9F04_RS06310;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9F04_RS06310;old_locus_tag=C9F04_06510
NZ_PYKF01000236.1	Protein Homology	CDS	12363	13157	.	+	0	ID=cds-WP_000734293.1;Parent=gene-C9F04_RS06310;Dbxref=Genbank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9F04_RS06310;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	13187	13954	.	-	.	ID=gene-C9F04_RS06315;Name=C9F04_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06315;old_locus_tag=C9F04_06515
NZ_PYKF01000236.1	Protein Homology	CDS	13187	13954	.	-	0	ID=cds-WP_146712422.1;Parent=gene-C9F04_RS06315;Dbxref=Genbank:WP_146712422.1;Name=WP_146712422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9F04_RS06315;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_146712422.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	gene	13964	14947	.	-	.	ID=gene-C9F04_RS06320;Name=C9F04_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06320;old_locus_tag=C9F04_06520
NZ_PYKF01000236.1	Protein Homology	CDS	13964	14947	.	-	0	ID=cds-WP_000448753.1;Parent=gene-C9F04_RS06320;Dbxref=Genbank:WP_000448753.1;Name=WP_000448753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9F04_RS06320;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448753.1;transl_table=11
NZ_PYKF01000236.1	RefSeq	pseudogene	14937	15998	.	-	.	ID=gene-C9F04_RS06325;Name=C9F04_RS06325;end_range=15998,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06325;old_locus_tag=C9F04_06525;partial=true;pseudo=true
NZ_PYKF01000236.1	Protein Homology	CDS	14937	15998	.	-	0	ID=cds-C9F04_RS06325;Parent=gene-C9F04_RS06325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9F04_RS06325;partial=true;product=D-threonate kinase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000189.1 1 1370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000189.1	RefSeq	region	1	1370	.	+	.	ID=NZ_PYKF01000189.1:1..1370;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000189.1	RefSeq	gene	1	436	.	+	.	ID=gene-C9F04_RS04410;Name=C9F04_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04410;old_locus_tag=C9F04_04550;partial=true;start_range=.,1
NZ_PYKF01000189.1	Protein Homology	CDS	1	436	.	+	1	ID=cds-WP_146712332.1;Parent=gene-C9F04_RS04410;Dbxref=Genbank:WP_146712332.1;Name=WP_146712332.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9F04_RS04410;partial=true;product=PDZ domain-containing protein;protein_id=WP_146712332.1;start_range=.,1;transl_table=11
NZ_PYKF01000189.1	RefSeq	gene	470	1201	.	-	.	ID=gene-C9F04_RS04415;Name=C9F04_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04415;old_locus_tag=C9F04_04555
NZ_PYKF01000189.1	Protein Homology	CDS	470	1201	.	-	0	ID=cds-WP_024792581.1;Parent=gene-C9F04_RS04415;Dbxref=Genbank:WP_024792581.1;Name=WP_024792581.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9F04_RS04415;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_024792581.1;transl_table=11
NZ_PYKF01000189.1	RefSeq	gene	1221	1370	.	-	.	ID=gene-C9F04_RS04420;Name=C9F04_RS04420;end_range=1370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04420;old_locus_tag=C9F04_04560;partial=true
NZ_PYKF01000189.1	Protein Homology	CDS	1221	1370	.	-	0	ID=cds-WP_023136219.1;Parent=gene-C9F04_RS04420;Dbxref=Genbank:WP_023136219.1;Name=WP_023136219.1;end_range=1370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F04_RS04420;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_023136219.1;transl_table=11
##sequence-region NZ_PYKF01000016.1 1 1370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000016.1	RefSeq	region	1	1370	.	+	.	ID=NZ_PYKF01000016.1:1..1370;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000016.1	RefSeq	gene	1	246	.	+	.	ID=gene-C9F04_RS00190;Name=C9F04_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00190;old_locus_tag=C9F04_00205;partial=true;start_range=.,1
NZ_PYKF01000016.1	Protein Homology	CDS	1	246	.	+	0	ID=cds-WP_146712130.1;Parent=gene-C9F04_RS00190;Dbxref=Genbank:WP_146712130.1;Name=WP_146712130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9F04_RS00190;partial=true;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_146712130.1;start_range=.,1;transl_table=11
NZ_PYKF01000016.1	RefSeq	gene	447	1370	.	+	.	ID=gene-C9F04_RS00195;Name=asnS;end_range=1370,.;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9F04_RS00195;old_locus_tag=C9F04_00210;partial=true
NZ_PYKF01000016.1	Protein Homology	CDS	447	1370	.	+	0	ID=cds-WP_146712131.1;Parent=gene-C9F04_RS00195;Dbxref=Genbank:WP_146712131.1;Name=WP_146712131.1;Ontology_term=GO:0006421,GO:0004816;end_range=1370,.;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9F04_RS00195;partial=true;product=asparagine--tRNA ligase;protein_id=WP_146712131.1;transl_table=11
##sequence-region NZ_PYKF01000419.1 1 1359
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000419.1	RefSeq	region	1	1359	.	+	.	ID=NZ_PYKF01000419.1:1..1359;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000419.1	RefSeq	gene	1	1238	.	+	.	ID=gene-C9F04_RS12460;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9F04_RS12460;old_locus_tag=C9F04_12880;partial=true;start_range=.,1
NZ_PYKF01000419.1	Protein Homology	CDS	1	1238	.	+	2	ID=cds-WP_146712694.1;Parent=gene-C9F04_RS12460;Dbxref=Genbank:WP_146712694.1;Name=WP_146712694.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9F04_RS12460;partial=true;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_146712694.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000312.1 1 1351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000312.1	RefSeq	region	1	1351	.	+	.	ID=NZ_PYKF01000312.1:1..1351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000312.1	RefSeq	gene	1	1351	.	-	.	ID=gene-C9F04_RS09165;Name=C9F04_RS09165;end_range=1351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09165;old_locus_tag=C9F04_09470;partial=true;start_range=.,1
NZ_PYKF01000312.1	Protein Homology	CDS	1	1351	.	-	1	ID=cds-WP_222591888.1;Parent=gene-C9F04_RS09165;Dbxref=Genbank:WP_222591888.1;Name=WP_222591888.1;end_range=1351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505166.1;locus_tag=C9F04_RS09165;partial=true;product=DUF823 domain-containing adhesin;protein_id=WP_222591888.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000099.1 1 1348
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000099.1	RefSeq	region	1	1348	.	+	.	ID=NZ_PYKF01000099.1:1..1348;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000099.1	RefSeq	pseudogene	1	185	.	-	.	ID=gene-C9F04_RS26875;Name=C9F04_RS26875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26875;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000099.1	Protein Homology	CDS	1	185	.	-	0	ID=cds-C9F04_RS26875;Parent=gene-C9F04_RS26875;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820931.1;locus_tag=C9F04_RS26875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000099.1	RefSeq	gene	185	1042	.	-	.	ID=gene-C9F04_RS01900;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9F04_RS01900;old_locus_tag=C9F04_01985
NZ_PYKF01000099.1	Protein Homology	CDS	185	1042	.	-	0	ID=cds-WP_000640013.1;Parent=gene-C9F04_RS01900;Dbxref=Genbank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9F04_RS01900;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11
NZ_PYKF01000099.1	RefSeq	gene	1057	1348	.	-	.	ID=gene-C9F04_RS01905;Name=C9F04_RS01905;end_range=1348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01905;old_locus_tag=C9F04_01990;partial=true
NZ_PYKF01000099.1	Protein Homology	CDS	1057	1348	.	-	1	ID=cds-WP_146712215.1;Parent=gene-C9F04_RS01905;Dbxref=Genbank:WP_146712215.1;Name=WP_146712215.1;end_range=1348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9F04_RS01905;partial=true;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_146712215.1;transl_table=11
##sequence-region NZ_PYKF01000142.1 1 1331
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000142.1	RefSeq	region	1	1331	.	+	.	ID=NZ_PYKF01000142.1:1..1331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000142.1	RefSeq	gene	200	1331	.	-	.	ID=gene-C9F04_RS02950;Name=purB;end_range=1331,.;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9F04_RS02950;old_locus_tag=C9F04_03055;partial=true
NZ_PYKF01000142.1	Protein Homology	CDS	200	1331	.	-	1	ID=cds-WP_146712272.1;Parent=gene-C9F04_RS02950;Dbxref=Genbank:WP_146712272.1;Name=WP_146712272.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;end_range=1331,.;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9F04_RS02950;partial=true;product=adenylosuccinate lyase;protein_id=WP_146712272.1;transl_table=11
##sequence-region NZ_PYKF01000234.1 1 1321
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000234.1	RefSeq	region	1	1321	.	+	.	ID=NZ_PYKF01000234.1:1..1321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000234.1	RefSeq	gene	1	1321	.	-	.	ID=gene-C9F04_RS06225;Name=C9F04_RS06225;end_range=1321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06225;old_locus_tag=C9F04_06420;partial=true;start_range=.,1
NZ_PYKF01000234.1	Protein Homology	CDS	1	1321	.	-	2	ID=cds-WP_146712418.1;Parent=gene-C9F04_RS06225;Dbxref=Genbank:WP_146712418.1;Name=WP_146712418.1;end_range=1321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F04_RS06225;partial=true;product=hypothetical protein;protein_id=WP_146712418.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000150.1 1 1304
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000150.1	RefSeq	region	1	1304	.	+	.	ID=NZ_PYKF01000150.1:1..1304;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000150.1	RefSeq	gene	1	713	.	+	.	ID=gene-C9F04_RS03155;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9F04_RS03155;old_locus_tag=C9F04_03255;partial=true;start_range=.,1
NZ_PYKF01000150.1	Protein Homology	CDS	1	713	.	+	2	ID=cds-WP_146712281.1;Parent=gene-C9F04_RS03155;Dbxref=Genbank:WP_146712281.1;Name=WP_146712281.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9F04_RS03155;partial=true;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_146712281.1;start_range=.,1;transl_table=11
NZ_PYKF01000150.1	RefSeq	pseudogene	716	1255	.	+	.	ID=gene-C9F04_RS03160;Name=alkB;end_range=1255,.;gbkey=Gene;gene=alkB;gene_biotype=pseudogene;locus_tag=C9F04_RS03160;old_locus_tag=C9F04_03260;partial=true;pseudo=true
NZ_PYKF01000150.1	Protein Homology	CDS	716	1255	.	+	0	ID=cds-C9F04_RS03160;Parent=gene-C9F04_RS03160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1255,.;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9F04_RS03160;partial=true;product=DNA oxidative demethylase AlkB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000481.1 1 1302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000481.1	RefSeq	region	1	1302	.	+	.	ID=NZ_PYKF01000481.1:1..1302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000481.1	RefSeq	pseudogene	1	1302	.	+	.	ID=gene-C9F04_RS14430;Name=C9F04_RS14430;end_range=1302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14430;old_locus_tag=C9F04_14900;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000481.1	Protein Homology	CDS	1	1302	.	+	0	ID=cds-C9F04_RS14430;Parent=gene-C9F04_RS14430;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0003677,GO:0005524,GO:0016787;end_range=1302,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774452.1;locus_tag=C9F04_RS14430;partial=true;product=DEAD/DEAH box helicase family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000533.1 1 1299
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000533.1	RefSeq	region	1	1299	.	+	.	ID=NZ_PYKF01000533.1:1..1299;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000533.1	RefSeq	pseudogene	1	80	.	+	.	ID=gene-C9F04_RS15950;Name=C9F04_RS15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15950;old_locus_tag=C9F04_16450;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000533.1	Protein Homology	CDS	1	80	.	+	2	ID=cds-C9F04_RS15950;Parent=gene-C9F04_RS15950;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9F04_RS15950;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000533.1	RefSeq	gene	152	325	.	-	.	ID=gene-C9F04_RS15955;Name=C9F04_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15955;old_locus_tag=C9F04_16455
NZ_PYKF01000533.1	Protein Homology	CDS	152	325	.	-	0	ID=cds-WP_001083582.1;Parent=gene-C9F04_RS15955;Dbxref=Genbank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9F04_RS15955;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WP_001083582.1;transl_table=11
NZ_PYKF01000533.1	RefSeq	gene	517	654	.	-	.	ID=gene-C9F04_RS15960;Name=C9F04_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15960;old_locus_tag=C9F04_16460
NZ_PYKF01000533.1	Protein Homology	CDS	517	654	.	-	0	ID=cds-WP_001519337.1;Parent=gene-C9F04_RS15960;Dbxref=Genbank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9F04_RS15960;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11
NZ_PYKF01000533.1	RefSeq	gene	1006	1299	.	-	.	ID=gene-C9F04_RS15965;Name=C9F04_RS15965;end_range=1299,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15965;old_locus_tag=C9F04_16465;partial=true
NZ_PYKF01000533.1	Protein Homology	CDS	1006	1299	.	-	0	ID=cds-WP_146712866.1;Parent=gene-C9F04_RS15965;Dbxref=Genbank:WP_146712866.1;Name=WP_146712866.1;end_range=1299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9F04_RS15965;partial=true;product=YcgN family cysteine cluster protein;protein_id=WP_146712866.1;transl_table=11
##sequence-region NZ_PYKF01000221.1 1 15996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000221.1	RefSeq	region	1	15996	.	+	.	ID=NZ_PYKF01000221.1:1..15996;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000221.1	RefSeq	gene	1	678	.	-	.	ID=gene-C9F04_RS05575;Name=C9F04_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05575;old_locus_tag=C9F04_05750;partial=true;start_range=.,1
NZ_PYKF01000221.1	Protein Homology	CDS	1	678	.	-	0	ID=cds-WP_186799001.1;Parent=gene-C9F04_RS05575;Dbxref=Genbank:WP_186799001.1;Name=WP_186799001.1;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706533.2;locus_tag=C9F04_RS05575;partial=true;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_186799001.1;start_range=.,1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	678	767	.	-	.	ID=gene-C9F04_RS05580;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9F04_RS05580;old_locus_tag=C9F04_05755
NZ_PYKF01000221.1	Protein Homology	CDS	678	767	.	-	0	ID=cds-WP_001670793.1;Parent=gene-C9F04_RS05580;Dbxref=Genbank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9F04_RS05580;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	1104	1310	.	+	.	ID=gene-C9F04_RS05585;Name=C9F04_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05585;old_locus_tag=C9F04_05760
NZ_PYKF01000221.1	Protein Homology	CDS	1104	1310	.	+	0	ID=cds-WP_000401433.1;Parent=gene-C9F04_RS05585;Dbxref=Genbank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9F04_RS05585;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	1421	2842	.	+	.	ID=gene-C9F04_RS05590;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9F04_RS05590;old_locus_tag=C9F04_05765
NZ_PYKF01000221.1	Protein Homology	CDS	1421	2842	.	+	0	ID=cds-WP_001142022.1;Parent=gene-C9F04_RS05590;Dbxref=Genbank:WP_001142022.1;Name=WP_001142022.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9F04_RS05590;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142022.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	2881	4362	.	-	.	ID=gene-C9F04_RS05595;Name=C9F04_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05595;old_locus_tag=C9F04_05770
NZ_PYKF01000221.1	Protein Homology	CDS	2881	4362	.	-	0	ID=cds-WP_146712394.1;Parent=gene-C9F04_RS05595;Dbxref=Genbank:WP_146712394.1;Name=WP_146712394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9F04_RS05595;product=MFS transporter;protein_id=WP_146712394.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	4691	5434	.	+	.	ID=gene-C9F04_RS05600;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9F04_RS05600;old_locus_tag=C9F04_05780
NZ_PYKF01000221.1	Protein Homology	CDS	4691	5434	.	+	0	ID=cds-WP_000798844.1;Parent=gene-C9F04_RS05600;Dbxref=Genbank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F04_RS05600;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	5450	6106	.	+	.	ID=gene-C9F04_RS05605;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9F04_RS05605;old_locus_tag=C9F04_05785
NZ_PYKF01000221.1	Protein Homology	CDS	5450	6106	.	+	0	ID=cds-WP_001188371.1;Parent=gene-C9F04_RS05605;Dbxref=Genbank:WP_001188371.1;Name=WP_001188371.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9F04_RS05605;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	6100	7032	.	+	.	ID=gene-C9F04_RS05610;Name=C9F04_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05610;old_locus_tag=C9F04_05790
NZ_PYKF01000221.1	Protein Homology	CDS	6100	7032	.	+	0	ID=cds-WP_000932039.1;Parent=gene-C9F04_RS05610;Dbxref=Genbank:WP_000932039.1;Name=WP_000932039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9F04_RS05610;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_000932039.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	7022	7756	.	+	.	ID=gene-C9F04_RS05615;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9F04_RS05615;old_locus_tag=C9F04_05795
NZ_PYKF01000221.1	Protein Homology	CDS	7022	7756	.	+	0	ID=cds-WP_001017918.1;Parent=gene-C9F04_RS05615;Dbxref=Genbank:WP_001017918.1;Name=WP_001017918.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9F04_RS05615;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017918.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	8080	8211	.	+	.	ID=gene-C9F04_RS05620;Name=C9F04_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05620;old_locus_tag=C9F04_05800
NZ_PYKF01000221.1	Protein Homology	CDS	8080	8211	.	+	0	ID=cds-WP_001521652.1;Parent=gene-C9F04_RS05620;Dbxref=Genbank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=C9F04_RS05620;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	8271	8837	.	+	.	ID=gene-C9F04_RS05625;Name=C9F04_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05625;old_locus_tag=C9F04_05805
NZ_PYKF01000221.1	Protein Homology	CDS	8271	8837	.	+	0	ID=cds-WP_146712395.1;Parent=gene-C9F04_RS05625;Dbxref=Genbank:WP_146712395.1;Name=WP_146712395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=C9F04_RS05625;product=tyrosine-type DNA invertase;protein_id=WP_146712395.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	9015	9350	.	+	.	ID=gene-C9F04_RS05630;Name=C9F04_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05630;old_locus_tag=C9F04_05810
NZ_PYKF01000221.1	Protein Homology	CDS	9015	9350	.	+	0	ID=cds-WP_010988980.1;Parent=gene-C9F04_RS05630;Dbxref=Genbank:WP_010988980.1;Name=WP_010988980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=C9F04_RS05630;product=membrane protein;protein_id=WP_010988980.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	9352	10092	.	+	.	ID=gene-C9F04_RS05635;Name=C9F04_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05635;old_locus_tag=C9F04_05815
NZ_PYKF01000221.1	Protein Homology	CDS	9352	10092	.	+	0	ID=cds-WP_080110501.1;Parent=gene-C9F04_RS05635;Dbxref=Genbank:WP_080110501.1;Name=WP_080110501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=C9F04_RS05635;product=transport protein;protein_id=WP_080110501.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	10378	11529	.	+	.	ID=gene-C9F04_RS05640;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C9F04_RS05640;old_locus_tag=C9F04_05820
NZ_PYKF01000221.1	Protein Homology	CDS	10378	11529	.	+	0	ID=cds-WP_135369283.1;Parent=gene-C9F04_RS05640;Dbxref=Genbank:WP_135369283.1;Name=WP_135369283.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=C9F04_RS05640;product=UDP-galactopyranose mutase;protein_id=WP_135369283.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	11526	12422	.	+	.	ID=gene-C9F04_RS05645;Name=C9F04_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05645;old_locus_tag=C9F04_05825
NZ_PYKF01000221.1	Protein Homology	CDS	11526	12422	.	+	0	ID=cds-WP_000973919.1;Parent=gene-C9F04_RS05645;Dbxref=Genbank:WP_000973919.1;Name=WP_000973919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=C9F04_RS05645;product=glycosyltransferase family 2 protein;protein_id=WP_000973919.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	12435	13568	.	+	.	ID=gene-C9F04_RS05650;Name=C9F04_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05650;old_locus_tag=C9F04_05830
NZ_PYKF01000221.1	Protein Homology	CDS	12435	13568	.	+	0	ID=cds-WP_000824901.1;Parent=gene-C9F04_RS05650;Dbxref=Genbank:WP_000824901.1;Name=WP_000824901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=C9F04_RS05650;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	13697	14467	.	+	.	ID=gene-C9F04_RS05655;Name=C9F04_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05655;old_locus_tag=C9F04_05835
NZ_PYKF01000221.1	Protein Homology	CDS	13697	14467	.	+	0	ID=cds-WP_000998823.1;Parent=gene-C9F04_RS05655;Dbxref=Genbank:WP_000998823.1;Name=WP_000998823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=C9F04_RS05655;product=ABC transporter permease;protein_id=WP_000998823.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	gene	14471	15181	.	+	.	ID=gene-C9F04_RS05660;Name=C9F04_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS05660;old_locus_tag=C9F04_05840
NZ_PYKF01000221.1	Protein Homology	CDS	14471	15181	.	+	0	ID=cds-WP_000702849.1;Parent=gene-C9F04_RS05660;Dbxref=Genbank:WP_000702849.1;Name=WP_000702849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=C9F04_RS05660;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11
NZ_PYKF01000221.1	RefSeq	pseudogene	15275	15996	.	+	.	ID=gene-C9F04_RS05665;Name=C9F04_RS05665;end_range=15996,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05665;old_locus_tag=C9F04_05845;partial=true;pseudo=true
NZ_PYKF01000221.1	Protein Homology	CDS	15275	15996	.	+	0	ID=cds-C9F04_RS05665;Parent=gene-C9F04_RS05665;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15996,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9F04_RS05665;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000554.1 1 1272
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000554.1	RefSeq	region	1	1272	.	+	.	ID=NZ_PYKF01000554.1:1..1272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000554.1	RefSeq	pseudogene	52	729	.	-	.	ID=gene-C9F04_RS16620;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=C9F04_RS16620;old_locus_tag=C9F04_17135;partial=true;pseudo=true;start_range=.,52
NZ_PYKF01000554.1	Protein Homology	CDS	52	729	.	-	0	ID=cds-C9F04_RS16620;Parent=gene-C9F04_RS16620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9F04_RS16620;partial=true;product=macrolide transporter subunit MacA;pseudo=true;start_range=.,52;transl_table=11
NZ_PYKF01000554.1	RefSeq	gene	875	1272	.	+	.	ID=gene-C9F04_RS16625;Name=C9F04_RS16625;end_range=1272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16625;old_locus_tag=C9F04_17140;partial=true
NZ_PYKF01000554.1	Protein Homology	CDS	875	1272	.	+	0	ID=cds-WP_146712897.1;Parent=gene-C9F04_RS16625;Dbxref=Genbank:WP_146712897.1;Name=WP_146712897.1;end_range=1272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9F04_RS16625;partial=true;product=DUF535 family protein;protein_id=WP_146712897.1;transl_table=11
##sequence-region NZ_PYKF01000551.1 1 1271
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000551.1	RefSeq	region	1	1271	.	+	.	ID=NZ_PYKF01000551.1:1..1271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000551.1	RefSeq	gene	1	1271	.	+	.	ID=gene-C9F04_RS16515;Name=C9F04_RS16515;end_range=1271,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16515;old_locus_tag=C9F04_17015;partial=true;start_range=.,1
NZ_PYKF01000551.1	Protein Homology	CDS	1	1271	.	+	2	ID=cds-WP_261771307.1;Parent=gene-C9F04_RS16515;Dbxref=Genbank:WP_261771307.1;Name=WP_261771307.1;end_range=1271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F04_RS16515;partial=true;product=AsmA family protein;protein_id=WP_261771307.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000590.1 1 1269
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000590.1	RefSeq	region	1	1269	.	+	.	ID=NZ_PYKF01000590.1:1..1269;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000590.1	RefSeq	pseudogene	65	826	.	-	.	ID=gene-C9F04_RS17575;Name=C9F04_RS17575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17575;old_locus_tag=C9F04_18135;partial=true;pseudo=true;start_range=.,65
NZ_PYKF01000590.1	Protein Homology	CDS	65	826	.	-	0	ID=cds-C9F04_RS17575;Parent=gene-C9F04_RS17575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709819.1;locus_tag=C9F04_RS17575;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,65;transl_table=11
NZ_PYKF01000590.1	RefSeq	pseudogene	922	1269	.	-	.	ID=gene-C9F04_RS17580;Name=dcuB;end_range=1269,.;gbkey=Gene;gene=dcuB;gene_biotype=pseudogene;locus_tag=C9F04_RS17580;old_locus_tag=C9F04_18140;partial=true;pseudo=true
NZ_PYKF01000590.1	Protein Homology	CDS	922	1269	.	-	0	ID=cds-C9F04_RS17580;Parent=gene-C9F04_RS17580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1269,.;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9F04_RS17580;partial=true;product=anaerobic C4-dicarboxylate transporter DcuB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000793.1 1 1262
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000793.1	RefSeq	region	1	1262	.	+	.	ID=NZ_PYKF01000793.1:1..1262;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000793.1	RefSeq	gene	131	1051	.	-	.	ID=gene-C9F04_RS24720;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9F04_RS24720;old_locus_tag=C9F04_25565
NZ_PYKF01000793.1	Protein Homology	CDS	131	1051	.	-	0	ID=cds-WP_135369558.1;Parent=gene-C9F04_RS24720;Dbxref=Genbank:WP_135369558.1;Name=WP_135369558.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9F04_RS24720;product=agmatinase;protein_id=WP_135369558.1;transl_table=11
##sequence-region NZ_PYKF01000633.1 1 1259
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000633.1	RefSeq	region	1	1259	.	+	.	ID=NZ_PYKF01000633.1:1..1259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000633.1	RefSeq	gene	1	1259	.	+	.	ID=gene-C9F04_RS19275;Name=C9F04_RS19275;end_range=1259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19275;old_locus_tag=C9F04_19905;partial=true;start_range=.,1
NZ_PYKF01000633.1	Protein Homology	CDS	1	1259	.	+	1	ID=cds-WP_146713034.1;Parent=gene-C9F04_RS19275;Dbxref=Genbank:WP_146713034.1;Name=WP_146713034.1;Ontology_term=GO:0016491;end_range=1259,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9F04_RS19275;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146713034.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000386.1 1 1252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000386.1	RefSeq	region	1	1252	.	+	.	ID=NZ_PYKF01000386.1:1..1252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000386.1	RefSeq	pseudogene	1	429	.	-	.	ID=gene-C9F04_RS11365;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=C9F04_RS11365;old_locus_tag=C9F04_11745;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000386.1	Protein Homology	CDS	1	429	.	-	0	ID=cds-C9F04_RS11365;Parent=gene-C9F04_RS11365;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9F04_RS11365;partial=true;product=nitrate reductase subunit beta;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000386.1	RefSeq	pseudogene	426	1252	.	-	.	ID=gene-C9F04_RS11370;Name=narZ;end_range=1252,.;gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=C9F04_RS11370;old_locus_tag=C9F04_11750;partial=true;pseudo=true
NZ_PYKF01000386.1	Protein Homology	CDS	426	1252	.	-	2	ID=cds-C9F04_RS11370;Parent=gene-C9F04_RS11370;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1252,.;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F04_RS11370;partial=true;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000446.1 1 1241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000446.1	RefSeq	region	1	1241	.	+	.	ID=NZ_PYKF01000446.1:1..1241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000446.1	RefSeq	pseudogene	1	216	.	-	.	ID=gene-C9F04_RS13355;Name=C9F04_RS13355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13355;old_locus_tag=C9F04_13790;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000446.1	Protein Homology	CDS	1	216	.	-	0	ID=cds-C9F04_RS13355;Parent=gene-C9F04_RS13355;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F04_RS13355;partial=true;product=histidinol-phosphate transaminase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000446.1	RefSeq	gene	213	1241	.	-	.	ID=gene-C9F04_RS13360;Name=hisD;end_range=1241,.;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9F04_RS13360;old_locus_tag=C9F04_13795;partial=true
NZ_PYKF01000446.1	Protein Homology	CDS	213	1241	.	-	0	ID=cds-WP_261771094.1;Parent=gene-C9F04_RS13360;Dbxref=Genbank:WP_261771094.1;Name=WP_261771094.1;Ontology_term=GO:0000105,GO:0004399;end_range=1241,.;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=C9F04_RS13360;partial=true;product=histidinol dehydrogenase;protein_id=WP_261771094.1;transl_table=11
##sequence-region NZ_PYKF01000542.1 1 1237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000542.1	RefSeq	region	1	1237	.	+	.	ID=NZ_PYKF01000542.1:1..1237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000542.1	RefSeq	gene	250	365	.	+	.	ID=gene-C9F04_RS16250;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F04_RS16250;old_locus_tag=C9F04_16750
NZ_PYKF01000542.1	cmsearch	rRNA	250	365	.	+	.	ID=rna-C9F04_RS16250;Parent=gene-C9F04_RS16250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS16250;product=5S ribosomal RNA
NZ_PYKF01000542.1	cmsearch	exon	250	365	.	+	.	ID=exon-C9F04_RS16250-1;Parent=rna-C9F04_RS16250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS16250;product=5S ribosomal RNA
NZ_PYKF01000542.1	RefSeq	gene	669	1184	.	-	.	ID=gene-C9F04_RS16255;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9F04_RS16255;old_locus_tag=C9F04_16755
NZ_PYKF01000542.1	Protein Homology	CDS	669	1184	.	-	0	ID=cds-WP_010989085.1;Parent=gene-C9F04_RS16255;Dbxref=Genbank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9F04_RS16255;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11
##sequence-region NZ_PYKF01000563.1 1 1225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000563.1	RefSeq	region	1	1225	.	+	.	ID=NZ_PYKF01000563.1:1..1225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000563.1	RefSeq	gene	220	1206	.	+	.	ID=gene-C9F04_RS16790;Name=C9F04_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16790;old_locus_tag=C9F04_17325
NZ_PYKF01000563.1	Protein Homology	CDS	220	1206	.	+	0	ID=cds-WP_058107667.1;Parent=gene-C9F04_RS16790;Dbxref=Genbank:WP_058107667.1;Name=WP_058107667.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9F04_RS16790;product=IS110 family transposase;protein_id=WP_058107667.1;transl_table=11
##sequence-region NZ_PYKF01000495.1 1 1209
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000495.1	RefSeq	region	1	1209	.	+	.	ID=NZ_PYKF01000495.1:1..1209;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000495.1	RefSeq	pseudogene	1	237	.	-	.	ID=gene-C9F04_RS14675;Name=C9F04_RS14675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14675;old_locus_tag=C9F04_15160;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000495.1	Protein Homology	CDS	1	237	.	-	0	ID=cds-C9F04_RS14675;Parent=gene-C9F04_RS14675;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F04_RS14675;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000495.1	RefSeq	pseudogene	294	1124	.	-	.	ID=gene-C9F04_RS14680;Name=C9F04_RS14680;end_range=1124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14680;old_locus_tag=C9F04_15165;partial=true;pseudo=true
NZ_PYKF01000495.1	Protein Homology	CDS	294	1124	.	-	0	ID=cds-C9F04_RS14680;Parent=gene-C9F04_RS14680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9F04_RS14680;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000043.1 1 15791
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000043.1	RefSeq	region	1	15791	.	+	.	ID=NZ_PYKF01000043.1:1..15791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000043.1	RefSeq	pseudogene	28	462	.	-	.	ID=gene-C9F04_RS00625;Name=C9F04_RS00625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00625;old_locus_tag=C9F04_00670;partial=true;pseudo=true;start_range=.,28
NZ_PYKF01000043.1	Protein Homology	CDS	28	462	.	-	0	ID=cds-C9F04_RS00625;Parent=gene-C9F04_RS00625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9F04_RS00625;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,28;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	490	1071	.	-	.	ID=gene-C9F04_RS00630;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9F04_RS00630;old_locus_tag=C9F04_00675
NZ_PYKF01000043.1	Protein Homology	CDS	490	1071	.	-	0	ID=cds-WP_000105725.1;Parent=gene-C9F04_RS00630;Dbxref=Genbank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9F04_RS00630;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	1071	1898	.	-	.	ID=gene-C9F04_RS00635;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9F04_RS00635;old_locus_tag=C9F04_00680
NZ_PYKF01000043.1	Protein Homology	CDS	1071	1898	.	-	0	ID=cds-WP_000444735.1;Parent=gene-C9F04_RS00635;Dbxref=Genbank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9F04_RS00635;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	1923	2345	.	-	.	ID=gene-C9F04_RS00640;Name=C9F04_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00640;old_locus_tag=C9F04_00685
NZ_PYKF01000043.1	Protein Homology	CDS	1923	2345	.	-	0	ID=cds-WP_000833404.1;Parent=gene-C9F04_RS00640;Dbxref=Genbank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9F04_RS00640;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	2342	2974	.	-	.	ID=gene-C9F04_RS00645;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9F04_RS00645;old_locus_tag=C9F04_00690
NZ_PYKF01000043.1	Protein Homology	CDS	2342	2974	.	-	0	ID=cds-WP_001231950.1;Parent=gene-C9F04_RS00645;Dbxref=Genbank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9F04_RS00645;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	3175	4650	.	+	.	ID=gene-C9F04_RS00650;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9F04_RS00650;old_locus_tag=C9F04_00695
NZ_PYKF01000043.1	Protein Homology	CDS	3175	4650	.	+	0	ID=cds-WP_072100461.1;Parent=gene-C9F04_RS00650;Dbxref=Genbank:WP_072100461.1;Name=WP_072100461.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9F04_RS00650;product=outer membrane channel protein TolC;protein_id=WP_072100461.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	4863	5534	.	+	.	ID=gene-C9F04_RS00655;Name=C9F04_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00655;old_locus_tag=C9F04_00705
NZ_PYKF01000043.1	Protein Homology	CDS	4863	5534	.	+	0	ID=cds-WP_000831528.1;Parent=gene-C9F04_RS00655;Dbxref=Genbank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9F04_RS00655;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	5540	6703	.	+	.	ID=gene-C9F04_RS00660;Name=C9F04_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00660;old_locus_tag=C9F04_00710
NZ_PYKF01000043.1	Protein Homology	CDS	5540	6703	.	+	0	ID=cds-WP_000442833.1;Parent=gene-C9F04_RS00660;Dbxref=Genbank:WP_000442833.1;Name=WP_000442833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9F04_RS00660;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	6764	7552	.	-	.	ID=gene-C9F04_RS00665;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9F04_RS00665;old_locus_tag=C9F04_00715
NZ_PYKF01000043.1	Protein Homology	CDS	6764	7552	.	-	0	ID=cds-WP_001520560.1;Parent=gene-C9F04_RS00665;Dbxref=Genbank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9F04_RS00665;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	7693	8466	.	+	.	ID=gene-C9F04_RS00670;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9F04_RS00670;old_locus_tag=C9F04_00720
NZ_PYKF01000043.1	Protein Homology	CDS	7693	8466	.	+	0	ID=cds-WP_000115874.1;Parent=gene-C9F04_RS00670;Dbxref=Genbank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9F04_RS00670;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	9109	10905	.	+	.	ID=gene-C9F04_RS00675;Name=C9F04_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00675;old_locus_tag=C9F04_00730
NZ_PYKF01000043.1	Protein Homology	CDS	9109	10905	.	+	0	ID=cds-WP_146712160.1;Parent=gene-C9F04_RS00675;Dbxref=Genbank:WP_146712160.1;Name=WP_146712160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9F04_RS00675;product=aryl-sulfate sulfotransferase;protein_id=WP_146712160.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	10925	11596	.	+	.	ID=gene-C9F04_RS00680;Name=C9F04_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00680;old_locus_tag=C9F04_00735
NZ_PYKF01000043.1	Protein Homology	CDS	10925	11596	.	+	0	ID=cds-WP_000096230.1;Parent=gene-C9F04_RS00680;Dbxref=Genbank:WP_000096230.1;Name=WP_000096230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9F04_RS00680;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	11611	12288	.	+	.	ID=gene-C9F04_RS00685;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9F04_RS00685;old_locus_tag=C9F04_00740
NZ_PYKF01000043.1	Protein Homology	CDS	11611	12288	.	+	0	ID=cds-WP_000345576.1;Parent=gene-C9F04_RS00685;Dbxref=Genbank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9F04_RS00685;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	12459	13112	.	-	.	ID=gene-C9F04_RS00690;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9F04_RS00690;old_locus_tag=C9F04_00745
NZ_PYKF01000043.1	Protein Homology	CDS	12459	13112	.	-	0	ID=cds-WP_001076978.1;Parent=gene-C9F04_RS00690;Dbxref=Genbank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9F04_RS00690;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11
NZ_PYKF01000043.1	cmsearch	riboswitch	13218	13416	.	-	.	ID=id-NZ_PYKF01000043.1:13218..13416;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_PYKF01000043.1	RefSeq	gene	13549	13845	.	+	.	ID=gene-C9F04_RS00695;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=C9F04_RS00695;old_locus_tag=C9F04_00750
NZ_PYKF01000043.1	Protein Homology	CDS	13549	13845	.	+	0	ID=cds-WP_000566824.1;Parent=gene-C9F04_RS00695;Dbxref=Genbank:WP_000566824.1;Name=WP_000566824.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=C9F04_RS00695;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	13920	14129	.	-	.	ID=gene-C9F04_RS00700;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9F04_RS00700;old_locus_tag=C9F04_00755
NZ_PYKF01000043.1	Protein Homology	CDS	13920	14129	.	-	0	ID=cds-WP_000928927.1;Parent=gene-C9F04_RS00700;Dbxref=Genbank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9F04_RS00700;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	14387	15007	.	+	.	ID=gene-C9F04_RS00705;Name=C9F04_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00705;old_locus_tag=C9F04_00760
NZ_PYKF01000043.1	Protein Homology	CDS	14387	15007	.	+	0	ID=cds-WP_146712161.1;Parent=gene-C9F04_RS00705;Dbxref=Genbank:WP_146712161.1;Name=WP_146712161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9F04_RS00705;product=DUF1449 family protein;protein_id=WP_146712161.1;transl_table=11
NZ_PYKF01000043.1	RefSeq	gene	15026	15791	.	+	.	ID=gene-C9F04_RS00710;Name=C9F04_RS00710;end_range=15791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00710;old_locus_tag=C9F04_00765;partial=true
NZ_PYKF01000043.1	Protein Homology	CDS	15026	15791	.	+	0	ID=cds-WP_146712162.1;Parent=gene-C9F04_RS00710;Dbxref=Genbank:WP_146712162.1;Name=WP_146712162.1;end_range=15791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F04_RS00710;partial=true;product=flotillin family protein;protein_id=WP_146712162.1;transl_table=11
##sequence-region NZ_PYKF01000619.1 1 1191
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000619.1	RefSeq	region	1	1191	.	+	.	ID=NZ_PYKF01000619.1:1..1191;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000619.1	RefSeq	gene	1	304	.	-	.	ID=gene-C9F04_RS18735;Name=C9F04_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18735;old_locus_tag=C9F04_19350;partial=true;start_range=.,1
NZ_PYKF01000619.1	Protein Homology	CDS	1	304	.	-	0	ID=cds-WP_146713006.1;Parent=gene-C9F04_RS18735;Dbxref=Genbank:WP_146713006.1;Name=WP_146713006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F04_RS18735;partial=true;product=DUF4034 domain-containing protein;protein_id=WP_146713006.1;start_range=.,1;transl_table=11
NZ_PYKF01000619.1	RefSeq	gene	315	1031	.	-	.	ID=gene-C9F04_RS18740;Name=C9F04_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18740;old_locus_tag=C9F04_19355
NZ_PYKF01000619.1	Protein Homology	CDS	315	1031	.	-	0	ID=cds-WP_146713007.1;Parent=gene-C9F04_RS18740;Dbxref=Genbank:WP_146713007.1;Name=WP_146713007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9F04_RS18740;product=DUF1266 domain-containing protein;protein_id=WP_146713007.1;transl_table=11
NZ_PYKF01000619.1	RefSeq	pseudogene	1034	1191	.	-	.	ID=gene-C9F04_RS18745;Name=C9F04_RS18745;end_range=1191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18745;old_locus_tag=C9F04_19360;partial=true;pseudo=true;start_range=.,1034
NZ_PYKF01000619.1	Protein Homology	CDS	1034	1191	.	-	2	ID=cds-C9F04_RS18745;Parent=gene-C9F04_RS18745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9F04_RS18745;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,1034;transl_table=11
##sequence-region NZ_PYKF01000453.1 1 1174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000453.1	RefSeq	region	1	1174	.	+	.	ID=NZ_PYKF01000453.1:1..1174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000453.1	RefSeq	pseudogene	51	590	.	+	.	ID=gene-C9F04_RS13640;Name=C9F04_RS13640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13640;old_locus_tag=C9F04_14085;partial=true;pseudo=true;start_range=.,51
NZ_PYKF01000453.1	Protein Homology	CDS	51	590	.	+	0	ID=cds-C9F04_RS13640;Parent=gene-C9F04_RS13640;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9F04_RS13640;partial=true;product=NADH-quinone oxidoreductase subunit F;pseudo=true;start_range=.,51;transl_table=11
NZ_PYKF01000453.1	RefSeq	gene	621	1174	.	+	.	ID=gene-C9F04_RS13645;Name=C9F04_RS13645;end_range=1174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13645;old_locus_tag=C9F04_14090;partial=true
NZ_PYKF01000453.1	Protein Homology	CDS	621	1174	.	+	0	ID=cds-WP_261771114.1;Parent=gene-C9F04_RS13645;Dbxref=Genbank:WP_261771114.1;Name=WP_261771114.1;end_range=1174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9F04_RS13645;partial=true;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_261771114.1;transl_table=11
##sequence-region NZ_PYKF01000321.1 1 1165
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000321.1	RefSeq	region	1	1165	.	+	.	ID=NZ_PYKF01000321.1:1..1165;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000321.1	RefSeq	gene	1	659	.	-	.	ID=gene-C9F04_RS09395;Name=C9F04_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09395;old_locus_tag=C9F04_09705;partial=true;start_range=.,1
NZ_PYKF01000321.1	Protein Homology	CDS	1	659	.	-	0	ID=cds-WP_146712543.1;Parent=gene-C9F04_RS09395;Dbxref=Genbank:WP_146712543.1;Name=WP_146712543.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F04_RS09395;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_146712543.1;start_range=.,1;transl_except=(pos:complement(72..74)%2Caa:Sec);transl_table=11
NZ_PYKF01000321.1	RefSeq	pseudogene	937	1165	.	+	.	ID=gene-C9F04_RS09400;Name=yddG;end_range=1165,.;gbkey=Gene;gene=yddG;gene_biotype=pseudogene;locus_tag=C9F04_RS09400;partial=true;pseudo=true
NZ_PYKF01000321.1	Protein Homology	CDS	937	1165	.	+	0	ID=cds-C9F04_RS09400;Parent=gene-C9F04_RS09400;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1165,.;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707617.1;locus_tag=C9F04_RS09400;partial=true;product=aromatic amino acid efflux DMT transporter YddG;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000742.1 1 1149
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000742.1	RefSeq	region	1	1149	.	+	.	ID=NZ_PYKF01000742.1:1..1149;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000742.1	RefSeq	pseudogene	1	113	.	+	.	ID=gene-C9F04_RS27255;Name=C9F04_RS27255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27255;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000742.1	Protein Homology	CDS	1	113	.	+	2	ID=cds-C9F04_RS27255;Parent=gene-C9F04_RS27255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752436.1;locus_tag=C9F04_RS27255;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000742.1	RefSeq	gene	163	822	.	+	.	ID=gene-C9F04_RS23020;Name=C9F04_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS23020;old_locus_tag=C9F04_23790
NZ_PYKF01000742.1	Protein Homology	CDS	163	822	.	+	0	ID=cds-WP_001519895.1;Parent=gene-C9F04_RS23020;Dbxref=Genbank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9F04_RS23020;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11
NZ_PYKF01000742.1	RefSeq	pseudogene	915	1118	.	+	.	ID=gene-C9F04_RS23025;Name=C9F04_RS23025;end_range=1118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23025;old_locus_tag=C9F04_23795;partial=true;pseudo=true
NZ_PYKF01000742.1	Protein Homology	CDS	915	1118	.	+	0	ID=cds-C9F04_RS23025;Parent=gene-C9F04_RS23025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9F04_RS23025;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000488.1 1 1137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000488.1	RefSeq	region	1	1137	.	+	.	ID=NZ_PYKF01000488.1:1..1137;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000488.1	RefSeq	pseudogene	1	1137	.	+	.	ID=gene-C9F04_RS14630;Name=C9F04_RS14630;end_range=1137,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14630;old_locus_tag=C9F04_15115;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000488.1	Protein Homology	CDS	1	1137	.	+	1	ID=cds-C9F04_RS14630;Parent=gene-C9F04_RS14630;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=1137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9F04_RS14630;partial=true;product=J domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000656.1 1 1133
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000656.1	RefSeq	region	1	1133	.	+	.	ID=NZ_PYKF01000656.1:1..1133;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000656.1	RefSeq	pseudogene	80	181	.	+	.	ID=gene-C9F04_RS26680;Name=C9F04_RS26680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26680;partial=true;pseudo=true;start_range=.,80
NZ_PYKF01000656.1	Protein Homology	CDS	80	181	.	+	0	ID=cds-C9F04_RS26680;Parent=gene-C9F04_RS26680;Note=functions in MreBCD complex in some organisms%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9F04_RS26680;partial=true;product=rod shape-determining protein;pseudo=true;start_range=.,80;transl_table=11
NZ_PYKF01000656.1	RefSeq	gene	246	1133	.	+	.	ID=gene-C9F04_RS20125;Name=mreC;end_range=1133,.;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9F04_RS20125;old_locus_tag=C9F04_20785;partial=true
NZ_PYKF01000656.1	Protein Homology	CDS	246	1133	.	+	0	ID=cds-WP_146713073.1;Parent=gene-C9F04_RS20125;Dbxref=Genbank:WP_146713073.1;Name=WP_146713073.1;Ontology_term=GO:0008360;end_range=1133,.;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9F04_RS20125;partial=true;product=rod shape-determining protein MreC;protein_id=WP_146713073.1;transl_table=11
##sequence-region NZ_PYKF01000180.1 1 1130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000180.1	RefSeq	region	1	1130	.	+	.	ID=NZ_PYKF01000180.1:1..1130;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000180.1	RefSeq	gene	1	432	.	-	.	ID=gene-C9F04_RS04120;Name=C9F04_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04120;old_locus_tag=C9F04_04260;partial=true;start_range=.,1
NZ_PYKF01000180.1	Protein Homology	CDS	1	432	.	-	0	ID=cds-WP_186798994.1;Parent=gene-C9F04_RS04120;Dbxref=Genbank:WP_186798994.1;Name=WP_186798994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9F04_RS04120;partial=true;product=paraquat-inducible protein A;protein_id=WP_186798994.1;start_range=.,1;transl_table=11
NZ_PYKF01000180.1	RefSeq	gene	447	1130	.	-	.	ID=gene-C9F04_RS04125;Name=C9F04_RS04125;end_range=1130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04125;old_locus_tag=C9F04_04265;partial=true
NZ_PYKF01000180.1	Protein Homology	CDS	447	1130	.	-	0	ID=cds-WP_146712320.1;Parent=gene-C9F04_RS04125;Dbxref=Genbank:WP_146712320.1;Name=WP_146712320.1;Ontology_term=GO:0005524;end_range=1130,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F04_RS04125;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146712320.1;transl_table=11
##sequence-region NZ_PYKF01000831.1 1 1117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000831.1	RefSeq	region	1	1117	.	+	.	ID=NZ_PYKF01000831.1:1..1117;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000831.1	RefSeq	gene	1	1117	.	-	.	ID=gene-C9F04_RS26030;Name=C9F04_RS26030;end_range=1117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26030;old_locus_tag=C9F04_26935;partial=true;start_range=.,1
NZ_PYKF01000831.1	Protein Homology	CDS	1	1117	.	-	2	ID=cds-WP_186799106.1;Parent=gene-C9F04_RS26030;Dbxref=Genbank:WP_186799106.1;Name=WP_186799106.1;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747458.1;locus_tag=C9F04_RS26030;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_186799106.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000485.1 1 1109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000485.1	RefSeq	region	1	1109	.	+	.	ID=NZ_PYKF01000485.1:1..1109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000485.1	RefSeq	gene	86	1051	.	+	.	ID=gene-C9F04_RS14605;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9F04_RS14605;old_locus_tag=C9F04_15090
NZ_PYKF01000485.1	Protein Homology	CDS	86	1051	.	+	0	ID=cds-WP_146641749.1;Parent=gene-C9F04_RS14605;Dbxref=Genbank:WP_146641749.1;Name=WP_146641749.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007725010.1;locus_tag=C9F04_RS14605;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_146641749.1;transl_table=11
##sequence-region NZ_PYKF01000318.1 1 1109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000318.1	RefSeq	region	1	1109	.	+	.	ID=NZ_PYKF01000318.1:1..1109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000318.1	RefSeq	gene	1	312	.	+	.	ID=gene-C9F04_RS09300;Name=C9F04_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09300;old_locus_tag=C9F04_09610;partial=true;start_range=.,1
NZ_PYKF01000318.1	Protein Homology	CDS	1	312	.	+	0	ID=cds-WP_146712537.1;Parent=gene-C9F04_RS09300;Dbxref=Genbank:WP_146712537.1;Name=WP_146712537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002060133.1;locus_tag=C9F04_RS09300;partial=true;product=SDR family oxidoreductase;protein_id=WP_146712537.1;start_range=.,1;transl_table=11
NZ_PYKF01000318.1	RefSeq	gene	326	1109	.	+	.	ID=gene-C9F04_RS09305;Name=C9F04_RS09305;end_range=1109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09305;old_locus_tag=C9F04_09615;partial=true
NZ_PYKF01000318.1	Protein Homology	CDS	326	1109	.	+	0	ID=cds-WP_146712538.1;Parent=gene-C9F04_RS09305;Dbxref=Genbank:WP_146712538.1;Name=WP_146712538.1;end_range=1109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=C9F04_RS09305;partial=true;product=transketolase;protein_id=WP_146712538.1;transl_table=11
##sequence-region NZ_PYKF01000168.1 1 15777
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000168.1	RefSeq	region	1	15777	.	+	.	ID=NZ_PYKF01000168.1:1..15777;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000168.1	RefSeq	gene	1	150	.	+	.	ID=gene-C9F04_RS03525;Name=C9F04_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03525;old_locus_tag=C9F04_03645;partial=true;start_range=.,1
NZ_PYKF01000168.1	Protein Homology	CDS	1	150	.	+	0	ID=cds-WP_023136219.1-2;Parent=gene-C9F04_RS03525;Dbxref=Genbank:WP_023136219.1;Name=WP_023136219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F04_RS03525;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_023136219.1;start_range=.,1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	285	1904	.	+	.	ID=gene-C9F04_RS03530;Name=C9F04_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03530;old_locus_tag=C9F04_03650
NZ_PYKF01000168.1	Protein Homology	CDS	285	1904	.	+	0	ID=cds-WP_023194337.1;Parent=gene-C9F04_RS03530;Dbxref=Genbank:WP_023194337.1;Name=WP_023194337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9F04_RS03530;product=sensor histidine kinase;protein_id=WP_023194337.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	1906	2592	.	+	.	ID=gene-C9F04_RS03535;Name=C9F04_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03535;old_locus_tag=C9F04_03655
NZ_PYKF01000168.1	Protein Homology	CDS	1906	2592	.	+	0	ID=cds-WP_000377406.1;Parent=gene-C9F04_RS03535;Dbxref=Genbank:WP_000377406.1;Name=WP_000377406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9F04_RS03535;product=response regulator;protein_id=WP_000377406.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	2614	3534	.	-	.	ID=gene-C9F04_RS03540;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9F04_RS03540;old_locus_tag=C9F04_03660
NZ_PYKF01000168.1	Protein Homology	CDS	2614	3534	.	-	0	ID=cds-WP_023257308.1;Parent=gene-C9F04_RS03540;Dbxref=Genbank:WP_023257308.1;Name=WP_023257308.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9F04_RS03540;product=ribonucleoside hydrolase RihC;protein_id=WP_023257308.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	3550	4752	.	-	.	ID=gene-C9F04_RS03545;Name=C9F04_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03545;old_locus_tag=C9F04_03665
NZ_PYKF01000168.1	Protein Homology	CDS	3550	4752	.	-	0	ID=cds-WP_146712298.1;Parent=gene-C9F04_RS03545;Dbxref=Genbank:WP_146712298.1;Name=WP_146712298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9F04_RS03545;product=nitrite reductase;protein_id=WP_146712298.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	4952	5902	.	-	.	ID=gene-C9F04_RS03550;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9F04_RS03550;old_locus_tag=C9F04_03670
NZ_PYKF01000168.1	Protein Homology	CDS	4952	5902	.	-	0	ID=cds-WP_001166422.1;Parent=gene-C9F04_RS03550;Dbxref=Genbank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9F04_RS03550;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	5905	6354	.	-	.	ID=gene-C9F04_RS03555;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9F04_RS03555;old_locus_tag=C9F04_03675
NZ_PYKF01000168.1	Protein Homology	CDS	5905	6354	.	-	0	ID=cds-WP_000047269.1;Parent=gene-C9F04_RS03555;Dbxref=Genbank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9F04_RS03555;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	6509	7009	.	-	.	ID=gene-C9F04_RS03560;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9F04_RS03560;old_locus_tag=C9F04_03680
NZ_PYKF01000168.1	Protein Homology	CDS	6509	7009	.	-	0	ID=cds-WP_000042739.1;Parent=gene-C9F04_RS03560;Dbxref=Genbank:WP_000042739.1;Name=WP_000042739.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9F04_RS03560;product=signal peptidase II;protein_id=WP_000042739.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	7009	9843	.	-	.	ID=gene-C9F04_RS03565;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9F04_RS03565;old_locus_tag=C9F04_03685
NZ_PYKF01000168.1	Protein Homology	CDS	7009	9843	.	-	0	ID=cds-WP_146712299.1;Parent=gene-C9F04_RS03565;Dbxref=Genbank:WP_146712299.1;Name=WP_146712299.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=C9F04_RS03565;product=isoleucine--tRNA ligase;protein_id=WP_146712299.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	9888	10826	.	-	.	ID=gene-C9F04_RS03570;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9F04_RS03570;old_locus_tag=C9F04_03690
NZ_PYKF01000168.1	Protein Homology	CDS	9888	10826	.	-	0	ID=cds-WP_000767311.1;Parent=gene-C9F04_RS03570;Dbxref=Genbank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9F04_RS03570;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	10834	11049	.	-	.	ID=gene-C9F04_RS03575;Name=C9F04_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03575;old_locus_tag=C9F04_03695
NZ_PYKF01000168.1	Protein Homology	CDS	10834	11049	.	-	0	ID=cds-WP_001575565.1;Parent=gene-C9F04_RS03575;Dbxref=Genbank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9F04_RS03575;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	11155	11418	.	+	.	ID=gene-C9F04_RS03580;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9F04_RS03580;old_locus_tag=C9F04_03700
NZ_PYKF01000168.1	Protein Homology	CDS	11155	11418	.	+	0	ID=cds-WP_001518655.1;Parent=gene-C9F04_RS03580;Dbxref=Genbank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9F04_RS03580;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	11874	13247	.	+	.	ID=gene-C9F04_RS03585;Name=C9F04_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03585;old_locus_tag=C9F04_03705
NZ_PYKF01000168.1	Protein Homology	CDS	11874	13247	.	+	0	ID=cds-WP_000099989.1;Parent=gene-C9F04_RS03585;Dbxref=Genbank:WP_000099989.1;Name=WP_000099989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9F04_RS03585;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	gene	13287	15326	.	+	.	ID=gene-C9F04_RS03590;Name=C9F04_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03590;old_locus_tag=C9F04_03710
NZ_PYKF01000168.1	Protein Homology	CDS	13287	15326	.	+	0	ID=cds-WP_135369521.1;Parent=gene-C9F04_RS03590;Dbxref=Genbank:WP_135369521.1;Name=WP_135369521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9F04_RS03590;product=glycoside hydrolase family 31 protein;protein_id=WP_135369521.1;transl_table=11
NZ_PYKF01000168.1	RefSeq	pseudogene	15381	15777	.	-	.	ID=gene-C9F04_RS03595;Name=nhaR;end_range=15777,.;gbkey=Gene;gene=nhaR;gene_biotype=pseudogene;locus_tag=C9F04_RS03595;old_locus_tag=C9F04_03715;partial=true;pseudo=true
NZ_PYKF01000168.1	Protein Homology	CDS	15381	15777	.	-	1	ID=cds-C9F04_RS03595;Parent=gene-C9F04_RS03595;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15777,.;gbkey=CDS;gene=nhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686630.1;locus_tag=C9F04_RS03595;partial=true;product=transcriptional activator NhaR;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000460.1 1 1094
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000460.1	RefSeq	region	1	1094	.	+	.	ID=NZ_PYKF01000460.1:1..1094;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000460.1	RefSeq	pseudogene	1	619	.	+	.	ID=gene-C9F04_RS13900;Name=C9F04_RS13900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13900;old_locus_tag=C9F04_14350;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000460.1	Protein Homology	CDS	1	619	.	+	1	ID=cds-C9F04_RS13900;Parent=gene-C9F04_RS13900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459975.1;locus_tag=C9F04_RS13900;partial=true;product=asparagine--tRNA ligase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000492.1 1 1087
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000492.1	RefSeq	region	1	1087	.	+	.	ID=NZ_PYKF01000492.1:1..1087;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000492.1	RefSeq	gene	1	1010	.	+	.	ID=gene-C9F04_RS14655;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9F04_RS14655;old_locus_tag=C9F04_15140;partial=true;start_range=.,1
NZ_PYKF01000492.1	Protein Homology	CDS	1	1010	.	+	2	ID=cds-WP_261771186.1;Parent=gene-C9F04_RS14655;Dbxref=Genbank:WP_261771186.1;Name=WP_261771186.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898408.1;locus_tag=C9F04_RS14655;partial=true;product=porin OmpA;protein_id=WP_261771186.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000491.1 1 1087
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000491.1	RefSeq	region	1	1087	.	+	.	ID=NZ_PYKF01000491.1:1..1087;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000491.1	RefSeq	pseudogene	1	760	.	+	.	ID=gene-C9F04_RS14645;Name=C9F04_RS14645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14645;old_locus_tag=C9F04_15130;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000491.1	Protein Homology	CDS	1	760	.	+	1	ID=cds-C9F04_RS14645;Parent=gene-C9F04_RS14645;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F04_RS14645;partial=true;product=Na+/H+ antiporter NhaC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000491.1	RefSeq	pseudogene	773	1087	.	+	.	ID=gene-C9F04_RS14650;Name=C9F04_RS14650;end_range=1087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14650;old_locus_tag=C9F04_15135;partial=true;pseudo=true
NZ_PYKF01000491.1	Protein Homology	CDS	773	1087	.	+	0	ID=cds-C9F04_RS14650;Parent=gene-C9F04_RS14650;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F04_RS14650;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000157.1 1 1079
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000157.1	RefSeq	region	1	1079	.	+	.	ID=NZ_PYKF01000157.1:1..1079;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000157.1	RefSeq	gene	1	357	.	-	.	ID=gene-C9F04_RS03310;Name=C9F04_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03310;old_locus_tag=C9F04_03415;partial=true;start_range=.,1
NZ_PYKF01000157.1	Protein Homology	CDS	1	357	.	-	0	ID=cds-WP_146712290.1;Parent=gene-C9F04_RS03310;Dbxref=Genbank:WP_146712290.1;Name=WP_146712290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9F04_RS03310;partial=true;product=pirin family protein;protein_id=WP_146712290.1;start_range=.,1;transl_table=11
NZ_PYKF01000157.1	RefSeq	pseudogene	481	1079	.	-	.	ID=gene-C9F04_RS03315;Name=C9F04_RS03315;end_range=1079,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03315;old_locus_tag=C9F04_03420;partial=true;pseudo=true
NZ_PYKF01000157.1	Protein Homology	CDS	481	1079	.	-	2	ID=cds-C9F04_RS03315;Parent=gene-C9F04_RS03315;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0000166;end_range=1079,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9F04_RS03315;partial=true;product=oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000412.1 1 1079
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000412.1	RefSeq	region	1	1079	.	+	.	ID=NZ_PYKF01000412.1:1..1079;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000412.1	RefSeq	pseudogene	75	371	.	-	.	ID=gene-C9F04_RS12240;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=pseudogene;locus_tag=C9F04_RS12240;old_locus_tag=C9F04_12655;partial=true;pseudo=true;start_range=.,75
NZ_PYKF01000412.1	Protein Homology	CDS	75	371	.	-	0	ID=cds-C9F04_RS12240;Parent=gene-C9F04_RS12240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F04_RS12240;partial=true;product=flagellar brake protein YcgR;pseudo=true;start_range=.,75;transl_table=11
NZ_PYKF01000412.1	RefSeq	gene	540	794	.	+	.	ID=gene-C9F04_RS12245;Name=C9F04_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12245;old_locus_tag=C9F04_12660
NZ_PYKF01000412.1	Protein Homology	CDS	540	794	.	+	0	ID=cds-WP_000511323.1;Parent=gene-C9F04_RS12245;Dbxref=Genbank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9F04_RS12245;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11
NZ_PYKF01000412.1	RefSeq	gene	857	1079	.	-	.	ID=gene-C9F04_RS12250;Name=C9F04_RS12250;end_range=1079,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12250;old_locus_tag=C9F04_12665;partial=true
NZ_PYKF01000412.1	Protein Homology	CDS	857	1079	.	-	1	ID=cds-WP_261771007.1;Parent=gene-C9F04_RS12250;Dbxref=Genbank:WP_261771007.1;Name=WP_261771007.1;Ontology_term=GO:0005991,GO:0004555;end_range=1079,.;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804566.1;locus_tag=C9F04_RS12250;partial=true;product=trehalase family glycosidase;protein_id=WP_261771007.1;transl_table=11
##sequence-region NZ_PYKF01000736.1 1 1059
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000736.1	RefSeq	region	1	1059	.	+	.	ID=NZ_PYKF01000736.1:1..1059;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000736.1	RefSeq	gene	1	1059	.	-	.	ID=gene-C9F04_RS22860;Name=C9F04_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22860;old_locus_tag=C9F04_23625;partial=true;start_range=.,1
NZ_PYKF01000736.1	Protein Homology	CDS	1	1059	.	-	0	ID=cds-WP_186799082.1;Parent=gene-C9F04_RS22860;Dbxref=Genbank:WP_186799082.1;Name=WP_186799082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F04_RS22860;partial=true;product=YcaO-like family protein;protein_id=WP_186799082.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000404.1 1 1057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000404.1	RefSeq	region	1	1057	.	+	.	ID=NZ_PYKF01000404.1:1..1057;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000404.1	RefSeq	gene	118	1057	.	-	.	ID=gene-C9F04_RS12010;Name=pgi;end_range=1057,.;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9F04_RS12010;old_locus_tag=C9F04_12425;partial=true
NZ_PYKF01000404.1	Protein Homology	CDS	118	1057	.	-	1	ID=cds-WP_146712679.1;Parent=gene-C9F04_RS12010;Dbxref=Genbank:WP_146712679.1;Name=WP_146712679.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;end_range=1057,.;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9F04_RS12010;partial=true;product=glucose-6-phosphate isomerase;protein_id=WP_146712679.1;transl_table=11
##sequence-region NZ_PYKF01000741.1 1 1053
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000741.1	RefSeq	region	1	1053	.	+	.	ID=NZ_PYKF01000741.1:1..1053;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000741.1	RefSeq	pseudogene	1	249	.	-	.	ID=gene-C9F04_RS23010;Name=C9F04_RS23010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23010;old_locus_tag=C9F04_23780;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000741.1	Protein Homology	CDS	1	249	.	-	0	ID=cds-C9F04_RS23010;Parent=gene-C9F04_RS23010;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9F04_RS23010;partial=true;product=two-component system sensor histidine kinase QseC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000741.1	RefSeq	gene	246	905	.	-	.	ID=gene-C9F04_RS23015;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9F04_RS23015;old_locus_tag=C9F04_23785
NZ_PYKF01000741.1	Protein Homology	CDS	246	905	.	-	0	ID=cds-WP_001221574.1;Parent=gene-C9F04_RS23015;Dbxref=Genbank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9F04_RS23015;product=two-component system response regulator QseB;protein_id=WP_001221574.1;transl_table=11
##sequence-region NZ_PYKF01000535.1 1 1049
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000535.1	RefSeq	region	1	1049	.	+	.	ID=NZ_PYKF01000535.1:1..1049;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000535.1	RefSeq	pseudogene	1	375	.	-	.	ID=gene-C9F04_RS15990;Name=C9F04_RS15990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15990;old_locus_tag=C9F04_16490;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000535.1	Protein Homology	CDS	1	375	.	-	0	ID=cds-C9F04_RS15990;Parent=gene-C9F04_RS15990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9F04_RS15990;partial=true;product=molybdate ABC transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000535.1	RefSeq	gene	375	1049	.	-	.	ID=gene-C9F04_RS15995;Name=cysP;end_range=1049,.;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9F04_RS15995;old_locus_tag=C9F04_16495;partial=true
NZ_PYKF01000535.1	Protein Homology	CDS	375	1049	.	-	0	ID=cds-WP_146712869.1;Parent=gene-C9F04_RS15995;Dbxref=Genbank:WP_146712869.1;Name=WP_146712869.1;Ontology_term=GO:0008272,GO:0015419;end_range=1049,.;gbkey=CDS;gene=cysP;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9F04_RS15995;partial=true;product=thiosulfate ABC transporter substrate-binding protein CysP;protein_id=WP_146712869.1;transl_table=11
##sequence-region NZ_PYKF01000570.1 1 1043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000570.1	RefSeq	region	1	1043	.	+	.	ID=NZ_PYKF01000570.1:1..1043;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000570.1	RefSeq	gene	1	1043	.	-	.	ID=gene-C9F04_RS17000;Name=tuf;end_range=1043,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9F04_RS17000;old_locus_tag=C9F04_17545;partial=true;start_range=.,1
NZ_PYKF01000570.1	Protein Homology	CDS	1	1043	.	-	0	ID=cds-WP_016740776.1;Parent=gene-C9F04_RS17000;Dbxref=Genbank:WP_016740776.1;Name=WP_016740776.1;Ontology_term=GO:0006414,GO:0003746;end_range=1043,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9F04_RS17000;partial=true;product=elongation factor Tu;protein_id=WP_016740776.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000774.1 1 15756
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000774.1	RefSeq	region	1	15756	.	+	.	ID=NZ_PYKF01000774.1:1..15756;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000774.1	RefSeq	gene	1	378	.	-	.	ID=gene-C9F04_RS24195;Name=C9F04_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24195;old_locus_tag=C9F04_25005;partial=true;start_range=.,1
NZ_PYKF01000774.1	Protein Homology	CDS	1	378	.	-	0	ID=cds-WP_139779708.1;Parent=gene-C9F04_RS24195;Dbxref=Genbank:WP_139779708.1;Name=WP_139779708.1;Ontology_term=GO:0035444,GO:0015099;gbkey=CDS;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F04_RS24195;partial=true;product=nickel/cobalt efflux transporter;protein_id=WP_139779708.1;start_range=.,1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	501	773	.	+	.	ID=gene-C9F04_RS24200;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9F04_RS24200;old_locus_tag=C9F04_25010
NZ_PYKF01000774.1	Protein Homology	CDS	501	773	.	+	0	ID=cds-WP_000019953.1;Parent=gene-C9F04_RS24200;Dbxref=Genbank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9F04_RS24200;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	804	2033	.	-	.	ID=gene-C9F04_RS24205;Name=C9F04_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24205;old_locus_tag=C9F04_25015
NZ_PYKF01000774.1	Protein Homology	CDS	804	2033	.	-	0	ID=cds-WP_000036837.1;Parent=gene-C9F04_RS24205;Dbxref=Genbank:WP_000036837.1;Name=WP_000036837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9F04_RS24205;product=amino acid permease;protein_id=WP_000036837.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	2175	2630	.	-	.	ID=gene-C9F04_RS24210;Name=C9F04_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24210;old_locus_tag=C9F04_25020
NZ_PYKF01000774.1	Protein Homology	CDS	2175	2630	.	-	0	ID=cds-WP_001519547.1;Parent=gene-C9F04_RS24210;Dbxref=Genbank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9F04_RS24210;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	pseudogene	2734	3597	.	+	.	ID=gene-C9F04_RS24215;Name=C9F04_RS24215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24215;old_locus_tag=C9F04_25025;pseudo=true
NZ_PYKF01000774.1	Protein Homology	CDS	2734	3597	.	+	0	ID=cds-C9F04_RS24215;Parent=gene-C9F04_RS24215;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9F04_RS24215;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	3720	4898	.	+	.	ID=gene-C9F04_RS24220;Name=C9F04_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24220;old_locus_tag=C9F04_25030
NZ_PYKF01000774.1	Protein Homology	CDS	3720	4898	.	+	0	ID=cds-WP_000665980.1;Parent=gene-C9F04_RS24220;Dbxref=Genbank:WP_000665980.1;Name=WP_000665980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9F04_RS24220;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	5329	6165	.	+	.	ID=gene-C9F04_RS24225;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=C9F04_RS24225;old_locus_tag=C9F04_25045
NZ_PYKF01000774.1	Protein Homology	CDS	5329	6165	.	+	0	ID=cds-WP_000383270.1;Parent=gene-C9F04_RS24225;Dbxref=Genbank:WP_000383270.1;Name=WP_000383270.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9F04_RS24225;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383270.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	6222	6983	.	+	.	ID=gene-C9F04_RS24230;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9F04_RS24230;old_locus_tag=C9F04_25050
NZ_PYKF01000774.1	Protein Homology	CDS	6222	6983	.	+	0	ID=cds-WP_000602478.1;Parent=gene-C9F04_RS24230;Dbxref=Genbank:WP_000602478.1;Name=WP_000602478.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9F04_RS24230;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602478.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	7337	8755	.	+	.	ID=gene-C9F04_RS24235;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9F04_RS24235;old_locus_tag=C9F04_25055
NZ_PYKF01000774.1	Protein Homology	CDS	7337	8755	.	+	0	ID=cds-WP_000253650.1;Parent=gene-C9F04_RS24235;Dbxref=Genbank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9F04_RS24235;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	8868	9575	.	+	.	ID=gene-C9F04_RS24240;Name=C9F04_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24240;old_locus_tag=C9F04_25060
NZ_PYKF01000774.1	Protein Homology	CDS	8868	9575	.	+	0	ID=cds-WP_000848633.1;Parent=gene-C9F04_RS24240;Dbxref=Genbank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9F04_RS24240;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	9547	10482	.	-	.	ID=gene-C9F04_RS24245;Name=C9F04_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24245;old_locus_tag=C9F04_25065
NZ_PYKF01000774.1	Protein Homology	CDS	9547	10482	.	-	0	ID=cds-WP_000741798.1;Parent=gene-C9F04_RS24245;Dbxref=Genbank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9F04_RS24245;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	10600	11862	.	+	.	ID=gene-C9F04_RS24250;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9F04_RS24250;old_locus_tag=C9F04_25070
NZ_PYKF01000774.1	Protein Homology	CDS	10600	11862	.	+	0	ID=cds-WP_146713284.1;Parent=gene-C9F04_RS24250;Dbxref=Genbank:WP_146713284.1;Name=WP_146713284.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9F04_RS24250;product=diaminopimelate decarboxylase;protein_id=WP_146713284.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	11872	12894	.	-	.	ID=gene-C9F04_RS24255;Name=C9F04_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24255;old_locus_tag=C9F04_25075
NZ_PYKF01000774.1	Protein Homology	CDS	11872	12894	.	-	0	ID=cds-WP_000968338.1;Parent=gene-C9F04_RS24255;Dbxref=Genbank:WP_000968338.1;Name=WP_000968338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9F04_RS24255;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	12905	13933	.	-	.	ID=gene-C9F04_RS24260;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9F04_RS24260;old_locus_tag=C9F04_25080
NZ_PYKF01000774.1	Protein Homology	CDS	12905	13933	.	-	0	ID=cds-WP_146713285.1;Parent=gene-C9F04_RS24260;Dbxref=Genbank:WP_146713285.1;Name=WP_146713285.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9F04_RS24260;product=HTH-type transcriptional regulator GalR;protein_id=WP_146713285.1;transl_table=11
NZ_PYKF01000774.1	RefSeq	gene	14526	15756	.	+	.	ID=gene-C9F04_RS24265;Name=C9F04_RS24265;end_range=15756,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24265;old_locus_tag=C9F04_25085;partial=true
NZ_PYKF01000774.1	Protein Homology	CDS	14526	15756	.	+	0	ID=cds-WP_146713286.1;Parent=gene-C9F04_RS24265;Dbxref=Genbank:WP_146713286.1;Name=WP_146713286.1;end_range=15756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9F04_RS24265;partial=true;product=AMP-binding protein;protein_id=WP_146713286.1;transl_table=11
##sequence-region NZ_PYKF01000164.1 1 1035
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000164.1	RefSeq	region	1	1035	.	+	.	ID=NZ_PYKF01000164.1:1..1035;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000164.1	RefSeq	gene	1	824	.	+	.	ID=gene-C9F04_RS03460;Name=C9F04_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03460;old_locus_tag=C9F04_03570;partial=true;start_range=.,1
NZ_PYKF01000164.1	Protein Homology	CDS	1	824	.	+	2	ID=cds-WP_146712295.1;Parent=gene-C9F04_RS03460;Dbxref=Genbank:WP_146712295.1;Name=WP_146712295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9F04_RS03460;partial=true;product=alpha/beta hydrolase;protein_id=WP_146712295.1;start_range=.,1;transl_table=11
NZ_PYKF01000164.1	RefSeq	gene	882	1035	.	+	.	ID=gene-C9F04_RS03465;Name=C9F04_RS03465;end_range=1035,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03465;old_locus_tag=C9F04_03575;partial=true
NZ_PYKF01000164.1	Protein Homology	CDS	882	1035	.	+	0	ID=cds-WP_146712296.1;Parent=gene-C9F04_RS03465;Dbxref=Genbank:WP_146712296.1;Name=WP_146712296.1;end_range=1035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9F04_RS03465;partial=true;product=Crl family RNA polymerase assembly factor;protein_id=WP_146712296.1;transl_table=11
##sequence-region NZ_PYKF01000526.1 1 1002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000526.1	RefSeq	region	1	1002	.	+	.	ID=NZ_PYKF01000526.1:1..1002;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000526.1	RefSeq	pseudogene	21	1002	.	-	.	ID=gene-C9F04_RS15780;Name=C9F04_RS15780;end_range=1002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15780;old_locus_tag=C9F04_16265;partial=true;pseudo=true;start_range=.,21
NZ_PYKF01000526.1	Protein Homology	CDS	21	1002	.	-	1	ID=cds-C9F04_RS15780;Parent=gene-C9F04_RS15780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=1002,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9F04_RS15780;partial=true;product=purine/pyrimidine permease;pseudo=true;start_range=.,21;transl_table=11
##sequence-region NZ_PYKF01000556.1 1 981
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000556.1	RefSeq	region	1	981	.	+	.	ID=NZ_PYKF01000556.1:1..981;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000556.1	RefSeq	pseudogene	146	981	.	+	.	ID=gene-C9F04_RS16645;Name=C9F04_RS16645;end_range=981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16645;old_locus_tag=C9F04_17160;partial=true;pseudo=true;start_range=.,146
NZ_PYKF01000556.1	Protein Homology	CDS	146	981	.	+	0	ID=cds-C9F04_RS16645;Parent=gene-C9F04_RS16645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0046819,GO:0015474,GO:0045203;end_range=981,.;gbkey=CDS;go_component=integral component of cell outer membrane|0045203||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9F04_RS16645;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,146;transl_table=11
##sequence-region NZ_PYKF01000155.1 1 975
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000155.1	RefSeq	region	1	975	.	+	.	ID=NZ_PYKF01000155.1:1..975;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000155.1	RefSeq	gene	1	347	.	+	.	ID=gene-C9F04_RS03280;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9F04_RS03280;old_locus_tag=C9F04_03385;partial=true;start_range=.,1
NZ_PYKF01000155.1	Protein Homology	CDS	1	347	.	+	2	ID=cds-WP_261770741.1;Parent=gene-C9F04_RS03280;Dbxref=Genbank:WP_261770741.1;Name=WP_261770741.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9F04_RS03280;partial=true;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_261770741.1;start_range=.,1;transl_table=11
NZ_PYKF01000155.1	RefSeq	pseudogene	378	975	.	+	.	ID=gene-C9F04_RS03285;Name=C9F04_RS03285;end_range=975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03285;old_locus_tag=C9F04_03390;partial=true;pseudo=true
NZ_PYKF01000155.1	Protein Homology	CDS	378	975	.	+	0	ID=cds-C9F04_RS03285;Parent=gene-C9F04_RS03285;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9F04_RS03285;partial=true;product=phosphate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000413.1 1 967
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000413.1	RefSeq	region	1	967	.	+	.	ID=NZ_PYKF01000413.1:1..967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000413.1	RefSeq	gene	1	878	.	-	.	ID=gene-C9F04_RS12255;Name=C9F04_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12255;old_locus_tag=C9F04_12670;partial=true;start_range=.,1
NZ_PYKF01000413.1	Protein Homology	CDS	1	878	.	-	0	ID=cds-WP_146712687.1;Parent=gene-C9F04_RS12255;Dbxref=Genbank:WP_146712687.1;Name=WP_146712687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9F04_RS12255;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_146712687.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000087.1 1 955
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000087.1	RefSeq	region	1	955	.	+	.	ID=NZ_PYKF01000087.1:1..955;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000087.1	RefSeq	pseudogene	1	295	.	+	.	ID=gene-C9F04_RS01710;Name=C9F04_RS01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01710;old_locus_tag=C9F04_01785;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000087.1	Protein Homology	CDS	1	295	.	+	1	ID=cds-C9F04_RS01710;Parent=gene-C9F04_RS01710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F04_RS01710;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000087.1	RefSeq	gene	295	955	.	+	.	ID=gene-C9F04_RS01715;Name=C9F04_RS01715;end_range=955,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01715;old_locus_tag=C9F04_01790;partial=true
NZ_PYKF01000087.1	Protein Homology	CDS	295	955	.	+	0	ID=cds-WP_146712206.1;Parent=gene-C9F04_RS01715;Dbxref=Genbank:WP_146712206.1;Name=WP_146712206.1;end_range=955,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9F04_RS01715;partial=true;product=phage tail protein;protein_id=WP_146712206.1;transl_table=11
##sequence-region NZ_PYKF01000749.1 1 954
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000749.1	RefSeq	region	1	954	.	+	.	ID=NZ_PYKF01000749.1:1..954;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000749.1	RefSeq	gene	1	954	.	-	.	ID=gene-C9F04_RS23240;Name=rsxC;end_range=954,.;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9F04_RS23240;old_locus_tag=C9F04_24010;partial=true;start_range=.,1
NZ_PYKF01000749.1	Protein Homology	CDS	1	954	.	-	2	ID=cds-WP_261771491.1;Parent=gene-C9F04_RS23240;Dbxref=Genbank:WP_261771491.1;Name=WP_261771491.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=954,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F04_RS23240;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_261771491.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000367.1 1 937
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000367.1	RefSeq	region	1	937	.	+	.	ID=NZ_PYKF01000367.1:1..937;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000367.1	RefSeq	pseudogene	33	215	.	-	.	ID=gene-C9F04_RS10765;Name=C9F04_RS10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10765;old_locus_tag=C9F04_11100;partial=true;pseudo=true;start_range=.,33
NZ_PYKF01000367.1	Protein Homology	CDS	33	215	.	-	0	ID=cds-C9F04_RS10765;Parent=gene-C9F04_RS10765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9F04_RS10765;partial=true;product=transposase;pseudo=true;start_range=.,33;transl_table=11
NZ_PYKF01000367.1	RefSeq	pseudogene	423	723	.	+	.	ID=gene-C9F04_RS10770;Name=C9F04_RS10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10770;old_locus_tag=C9F04_11105;pseudo=true
NZ_PYKF01000367.1	Protein Homology	CDS	423	723	.	+	0	ID=cds-C9F04_RS10770;Parent=gene-C9F04_RS10770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=C9F04_RS10770;product=YciI family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000163.1 1 934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000163.1	RefSeq	region	1	934	.	+	.	ID=NZ_PYKF01000163.1:1..934;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000163.1	RefSeq	pseudogene	1	934	.	+	.	ID=gene-C9F04_RS03455;Name=C9F04_RS03455;end_range=934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03455;old_locus_tag=C9F04_03565;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000163.1	Protein Homology	CDS	1	934	.	+	0	ID=cds-C9F04_RS03455;Parent=gene-C9F04_RS03455;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F04_RS03455;partial=true;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000208.1 1 934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000208.1	RefSeq	region	1	934	.	+	.	ID=NZ_PYKF01000208.1:1..934;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000208.1	RefSeq	gene	1	748	.	-	.	ID=gene-C9F04_RS05100;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=C9F04_RS05100;old_locus_tag=C9F04_05265;partial=true;start_range=.,1
NZ_PYKF01000208.1	Protein Homology	CDS	1	748	.	-	0	ID=cds-WP_146712371.1;Parent=gene-C9F04_RS05100;Dbxref=Genbank:WP_146712371.1;Name=WP_146712371.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F04_RS05100;partial=true;product=heme lyase NrfEFG subunit NrfE;protein_id=WP_146712371.1;start_range=.,1;transl_table=11
NZ_PYKF01000208.1	RefSeq	gene	741	934	.	-	.	ID=gene-C9F04_RS05105;Name=nrfD;end_range=934,.;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9F04_RS05105;old_locus_tag=C9F04_05270;partial=true
NZ_PYKF01000208.1	Protein Homology	CDS	741	934	.	-	2	ID=cds-WP_186798999.1;Parent=gene-C9F04_RS05105;Dbxref=Genbank:WP_186798999.1;Name=WP_186798999.1;end_range=934,.;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9F04_RS05105;partial=true;product=polysulfide reductase NrfD;protein_id=WP_186798999.1;transl_table=11
##sequence-region NZ_PYKF01000154.1 1 15356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000154.1	RefSeq	region	1	15356	.	+	.	ID=NZ_PYKF01000154.1:1..15356;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000154.1	RefSeq	pseudogene	87	485	.	+	.	ID=gene-C9F04_RS03215;Name=C9F04_RS03215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03215;old_locus_tag=C9F04_03320;partial=true;pseudo=true;start_range=.,87
NZ_PYKF01000154.1	Protein Homology	CDS	87	485	.	+	0	ID=cds-C9F04_RS03215;Parent=gene-C9F04_RS03215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310038.1;locus_tag=C9F04_RS03215;partial=true;product=phosphatidate cytidylyltransferase;pseudo=true;start_range=.,87;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	492	1148	.	+	.	ID=gene-C9F04_RS03220;Name=C9F04_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03220;old_locus_tag=C9F04_03325
NZ_PYKF01000154.1	Protein Homology	CDS	492	1148	.	+	0	ID=cds-WP_135369749.1;Parent=gene-C9F04_RS03220;Dbxref=Genbank:WP_135369749.1;Name=WP_135369749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702890.1;locus_tag=C9F04_RS03220;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_135369749.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	1123	2883	.	+	.	ID=gene-C9F04_RS03225;Name=C9F04_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03225;old_locus_tag=C9F04_03330
NZ_PYKF01000154.1	Protein Homology	CDS	1123	2883	.	+	0	ID=cds-WP_135369750.1;Parent=gene-C9F04_RS03225;Dbxref=Genbank:WP_135369750.1;Name=WP_135369750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126693.1;locus_tag=C9F04_RS03225;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_135369750.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	2873	4183	.	+	.	ID=gene-C9F04_RS03230;Name=C9F04_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03230;old_locus_tag=C9F04_03335
NZ_PYKF01000154.1	Protein Homology	CDS	2873	4183	.	+	0	ID=cds-WP_023137904.1;Parent=gene-C9F04_RS03230;Dbxref=Genbank:WP_023137904.1;Name=WP_023137904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835230.1;locus_tag=C9F04_RS03230;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_023137904.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	4174	4578	.	+	.	ID=gene-C9F04_RS03235;Name=C9F04_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03235;old_locus_tag=C9F04_03340
NZ_PYKF01000154.1	Protein Homology	CDS	4174	4578	.	+	0	ID=cds-WP_240776448.1;Parent=gene-C9F04_RS03235;Dbxref=Genbank:WP_240776448.1;Name=WP_240776448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126699.1;locus_tag=C9F04_RS03235;product=hypothetical protein;protein_id=WP_240776448.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	4637	5242	.	-	.	ID=gene-C9F04_RS03240;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9F04_RS03240;old_locus_tag=C9F04_03345
NZ_PYKF01000154.1	Protein Homology	CDS	4637	5242	.	-	0	ID=cds-WP_000048924.1;Parent=gene-C9F04_RS03240;Dbxref=Genbank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9F04_RS03240;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	5443	9345	.	+	.	ID=gene-C9F04_RS03245;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9F04_RS03245;old_locus_tag=C9F04_03350
NZ_PYKF01000154.1	Protein Homology	CDS	5443	9345	.	+	0	ID=cds-WP_146712286.1;Parent=gene-C9F04_RS03245;Dbxref=Genbank:WP_146712286.1;Name=WP_146712286.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F04_RS03245;product=ATP-dependent RNA helicase HrpA;protein_id=WP_146712286.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	9409	10209	.	+	.	ID=gene-C9F04_RS03250;Name=C9F04_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03250;old_locus_tag=C9F04_03355
NZ_PYKF01000154.1	Protein Homology	CDS	9409	10209	.	+	0	ID=cds-WP_023242334.1;Parent=gene-C9F04_RS03250;Dbxref=Genbank:WP_023242334.1;Name=WP_023242334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9F04_RS03250;product=YdcF family protein;protein_id=WP_023242334.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	10326	10856	.	+	.	ID=gene-C9F04_RS03255;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9F04_RS03255;old_locus_tag=C9F04_03360
NZ_PYKF01000154.1	Protein Homology	CDS	10326	10856	.	+	0	ID=cds-WP_000527277.1;Parent=gene-C9F04_RS03255;Dbxref=Genbank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016021;gbkey=CDS;gene=cybB;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9F04_RS03255;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	11127	11789	.	-	.	ID=gene-C9F04_RS03260;Name=C9F04_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03260;old_locus_tag=C9F04_03365
NZ_PYKF01000154.1	Protein Homology	CDS	11127	11789	.	-	0	ID=cds-WP_001520112.1;Parent=gene-C9F04_RS03260;Dbxref=Genbank:WP_001520112.1;Name=WP_001520112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9F04_RS03260;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	12253	13803	.	-	.	ID=gene-C9F04_RS03265;Name=C9F04_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03265;old_locus_tag=C9F04_03370
NZ_PYKF01000154.1	Protein Homology	CDS	12253	13803	.	-	0	ID=cds-WP_135369475.1;Parent=gene-C9F04_RS03265;Dbxref=Genbank:WP_135369475.1;Name=WP_135369475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9F04_RS03265;product=glycosyltransferase family 39 protein;protein_id=WP_135369475.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	13940	14620	.	-	.	ID=gene-C9F04_RS03270;Name=C9F04_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03270;old_locus_tag=C9F04_03375
NZ_PYKF01000154.1	Protein Homology	CDS	13940	14620	.	-	0	ID=cds-WP_000560165.1;Parent=gene-C9F04_RS03270;Dbxref=Genbank:WP_000560165.1;Name=WP_000560165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9F04_RS03270;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11
NZ_PYKF01000154.1	RefSeq	gene	14617	15348	.	-	.	ID=gene-C9F04_RS03275;Name=C9F04_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03275;old_locus_tag=C9F04_03380
NZ_PYKF01000154.1	Protein Homology	CDS	14617	15348	.	-	0	ID=cds-WP_146712287.1;Parent=gene-C9F04_RS03275;Dbxref=Genbank:WP_146712287.1;Name=WP_146712287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9F04_RS03275;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_146712287.1;transl_table=11
##sequence-region NZ_PYKF01000244.1 1 930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000244.1	RefSeq	region	1	930	.	+	.	ID=NZ_PYKF01000244.1:1..930;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000244.1	RefSeq	gene	1	862	.	-	.	ID=gene-C9F04_RS06560;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=C9F04_RS06560;old_locus_tag=C9F04_06770;partial=true;start_range=.,1
NZ_PYKF01000244.1	Protein Homology	CDS	1	862	.	-	0	ID=cds-WP_261770752.1;Parent=gene-C9F04_RS06560;Dbxref=Genbank:WP_261770752.1;Name=WP_261770752.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017372021.1;locus_tag=C9F04_RS06560;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_261770752.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000760.1 1 927
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000760.1	RefSeq	region	1	927	.	+	.	ID=NZ_PYKF01000760.1:1..927;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000760.1	RefSeq	pseudogene	1	518	.	-	.	ID=gene-C9F04_RS23675;Name=C9F04_RS23675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23675;old_locus_tag=C9F04_24470;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000760.1	Protein Homology	CDS	1	518	.	-	0	ID=cds-C9F04_RS23675;Parent=gene-C9F04_RS23675;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F04_RS23675;partial=true;product=glycine dehydrogenase (aminomethyl-transferring);pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000760.1	RefSeq	gene	681	927	.	-	.	ID=gene-C9F04_RS23680;Name=gcvH;end_range=927,.;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9F04_RS23680;old_locus_tag=C9F04_24475;partial=true
NZ_PYKF01000760.1	Protein Homology	CDS	681	927	.	-	1	ID=cds-WP_146713265.1;Parent=gene-C9F04_RS23680;Dbxref=Genbank:WP_146713265.1;Name=WP_146713265.1;Ontology_term=GO:0019464,GO:0003824;end_range=927,.;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9F04_RS23680;partial=true;product=glycine cleavage system protein GcvH;protein_id=WP_146713265.1;transl_table=11
##sequence-region NZ_PYKF01000377.1 1 918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000377.1	RefSeq	region	1	918	.	+	.	ID=NZ_PYKF01000377.1:1..918;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000377.1	RefSeq	pseudogene	1	742	.	+	.	ID=gene-C9F04_RS11130;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=pseudogene;gene_synonym=nhaP2,ycgO;locus_tag=C9F04_RS11130;old_locus_tag=C9F04_11495;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000377.1	Protein Homology	CDS	1	742	.	+	1	ID=cds-C9F04_RS11130;Parent=gene-C9F04_RS11130;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=C9F04_RS11130;partial=true;product=K+/H+ antiporter;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000377.1	RefSeq	gene	804	918	.	-	.	ID=gene-C9F04_RS27020;Name=C9F04_RS27020;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27020;partial=true
NZ_PYKF01000377.1	Protein Homology	CDS	804	918	.	-	1	ID=cds-WP_261770904.1;Parent=gene-C9F04_RS27020;Dbxref=Genbank:WP_261770904.1;Name=WP_261770904.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9F04_RS27020;partial=true;product=hypothetical protein;protein_id=WP_261770904.1;transl_table=11
##sequence-region NZ_PYKF01000581.1 1 892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000581.1	RefSeq	region	1	892	.	+	.	ID=NZ_PYKF01000581.1:1..892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000581.1	RefSeq	pseudogene	443	892	.	+	.	ID=gene-C9F04_RS17315;Name=gcvT;end_range=892,.;gbkey=Gene;gene=gcvT;gene_biotype=pseudogene;locus_tag=C9F04_RS17315;old_locus_tag=C9F04_17875;partial=true;pseudo=true
NZ_PYKF01000581.1	Protein Homology	CDS	443	892	.	+	0	ID=cds-C9F04_RS17315;Parent=gene-C9F04_RS17315;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=892,.;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9F04_RS17315;partial=true;product=glycine cleavage system aminomethyltransferase GcvT;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000478.1 1 891
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000478.1	RefSeq	region	1	891	.	+	.	ID=NZ_PYKF01000478.1:1..891;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000478.1	RefSeq	pseudogene	1	135	.	-	.	ID=gene-C9F04_RS14400;Name=C9F04_RS14400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14400;old_locus_tag=C9F04_14870;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000478.1	Protein Homology	CDS	1	135	.	-	0	ID=cds-C9F04_RS14400;Parent=gene-C9F04_RS14400;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9F04_RS14400;partial=true;product=SgcQ protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000478.1	RefSeq	pseudogene	149	891	.	-	.	ID=gene-C9F04_RS14405;Name=sgcC;end_range=891,.;gbkey=Gene;gene=sgcC;gene_biotype=pseudogene;locus_tag=C9F04_RS14405;old_locus_tag=C9F04_14875;partial=true;pseudo=true
NZ_PYKF01000478.1	Protein Homology	CDS	149	891	.	-	2	ID=cds-C9F04_RS14405;Parent=gene-C9F04_RS14405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=891,.;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F04_RS14405;partial=true;product=PTS sugar transporter subunit IIC SgcC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000606.1 1 887
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000606.1	RefSeq	region	1	887	.	+	.	ID=NZ_PYKF01000606.1:1..887;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000606.1	RefSeq	pseudogene	1	887	.	+	.	ID=gene-C9F04_RS18190;Name=pgtB;end_range=887,.;gbkey=Gene;gene=pgtB;gene_biotype=pseudogene;locus_tag=C9F04_RS18190;old_locus_tag=C9F04_18775;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000606.1	Protein Homology	CDS	1	887	.	+	2	ID=cds-C9F04_RS18190;Parent=gene-C9F04_RS18190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=887,.;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9F04_RS18190;partial=true;product=two-component system sensor histidine kinase PgtB;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000364.1 1 879
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000364.1	RefSeq	region	1	879	.	+	.	ID=NZ_PYKF01000364.1:1..879;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000364.1	RefSeq	pseudogene	1	758	.	-	.	ID=gene-C9F04_RS10710;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=pseudogene;locus_tag=C9F04_RS10710;old_locus_tag=C9F04_11045;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000364.1	Protein Homology	CDS	1	758	.	-	0	ID=cds-C9F04_RS10710;Parent=gene-C9F04_RS10710;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9F04_RS10710;partial=true;product=glucose-6-phosphate isomerase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000364.1	RefSeq	gene	697	879	.	-	.	ID=gene-C9F04_RS26770;Name=C9F04_RS26770;end_range=879,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26770;partial=true
NZ_PYKF01000364.1	GeneMarkS-2+	CDS	697	879	.	-	0	ID=cds-WP_222591889.1;Parent=gene-C9F04_RS26770;Dbxref=Genbank:WP_222591889.1;Name=WP_222591889.1;end_range=879,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26770;partial=true;product=hypothetical protein;protein_id=WP_222591889.1;transl_table=11
##sequence-region NZ_PYKF01000109.1 1 873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000109.1	RefSeq	region	1	873	.	+	.	ID=NZ_PYKF01000109.1:1..873;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000109.1	RefSeq	gene	1	522	.	-	.	ID=gene-C9F04_RS02165;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9F04_RS02165;old_locus_tag=C9F04_02245;partial=true;start_range=.,1
NZ_PYKF01000109.1	Protein Homology	CDS	1	522	.	-	0	ID=cds-WP_146712226.1;Parent=gene-C9F04_RS02165;Dbxref=Genbank:WP_146712226.1;Name=WP_146712226.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9F04_RS02165;partial=true;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_146712226.1;start_range=.,1;transl_table=11
NZ_PYKF01000109.1	RefSeq	gene	623	873	.	-	.	ID=gene-C9F04_RS02170;Name=C9F04_RS02170;end_range=873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02170;old_locus_tag=C9F04_02250;partial=true
NZ_PYKF01000109.1	Protein Homology	CDS	623	873	.	-	2	ID=cds-WP_186798981.1;Parent=gene-C9F04_RS02170;Dbxref=Genbank:WP_186798981.1;Name=WP_186798981.1;Ontology_term=GO:0003725;end_range=873,.;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F04_RS02170;partial=true;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_186798981.1;transl_table=11
##sequence-region NZ_PYKF01000720.1 1 871
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000720.1	RefSeq	region	1	871	.	+	.	ID=NZ_PYKF01000720.1:1..871;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000720.1	RefSeq	gene	1	871	.	-	.	ID=gene-C9F04_RS22375;Name=C9F04_RS22375;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22375;old_locus_tag=C9F04_23115;partial=true;start_range=.,1
NZ_PYKF01000720.1	Protein Homology	CDS	1	871	.	-	1	ID=cds-WP_261771466.1;Parent=gene-C9F04_RS22375;Dbxref=Genbank:WP_261771466.1;Name=WP_261771466.1;Ontology_term=GO:0006508,GO:0008236;end_range=871,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006684173.1;locus_tag=C9F04_RS22375;partial=true;product=S41 family peptidase;protein_id=WP_261771466.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000371.1 1 15351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000371.1	RefSeq	region	1	15351	.	+	.	ID=NZ_PYKF01000371.1:1..15351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000371.1	RefSeq	pseudogene	73	1122	.	-	.	ID=gene-C9F04_RS10840;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=pseudogene;locus_tag=C9F04_RS10840;old_locus_tag=C9F04_11185;partial=true;pseudo=true;start_range=.,73
NZ_PYKF01000371.1	Protein Homology	CDS	73	1122	.	-	0	ID=cds-C9F04_RS10840;Parent=gene-C9F04_RS10840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=envZ;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9F04_RS10840;partial=true;product=two-component system sensor histidine kinase EnvZ;pseudo=true;start_range=.,73;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	1119	1838	.	-	.	ID=gene-C9F04_RS10845;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9F04_RS10845;old_locus_tag=C9F04_11190
NZ_PYKF01000371.1	Protein Homology	CDS	1119	1838	.	-	0	ID=cds-WP_001157751.1;Parent=gene-C9F04_RS10845;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=C9F04_RS10845;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	2064	2537	.	+	.	ID=gene-C9F04_RS10850;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9F04_RS10850;old_locus_tag=C9F04_11195
NZ_PYKF01000371.1	Protein Homology	CDS	2064	2537	.	+	0	ID=cds-WP_146712625.1;Parent=gene-C9F04_RS10850;Dbxref=Genbank:WP_146712625.1;Name=WP_146712625.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9F04_RS10850;product=transcription elongation factor GreB;protein_id=WP_146712625.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	2636	4945	.	+	.	ID=gene-C9F04_RS10855;Name=C9F04_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10855;old_locus_tag=C9F04_11200
NZ_PYKF01000371.1	Protein Homology	CDS	2636	4945	.	+	0	ID=cds-WP_146712626.1;Parent=gene-C9F04_RS10855;Dbxref=Genbank:WP_146712626.1;Name=WP_146712626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9F04_RS10855;product=RNA-binding transcriptional accessory protein;protein_id=WP_146712626.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	5382	5609	.	+	.	ID=gene-C9F04_RS10860;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9F04_RS10860;old_locus_tag=C9F04_11210
NZ_PYKF01000371.1	Protein Homology	CDS	5382	5609	.	+	0	ID=cds-WP_001160955.1;Parent=gene-C9F04_RS10860;Dbxref=Genbank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9F04_RS10860;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	5628	7946	.	+	.	ID=gene-C9F04_RS10865;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F04_RS10865;old_locus_tag=C9F04_11215
NZ_PYKF01000371.1	Protein Homology	CDS	5628	7946	.	+	0	ID=cds-WP_000736983.1;Parent=gene-C9F04_RS10865;Dbxref=Genbank:WP_000736983.1;Name=WP_000736983.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016021;gbkey=CDS;gene=feoB;go_component=integral component of membrane|0016021||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9F04_RS10865;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736983.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	7959	8195	.	+	.	ID=gene-C9F04_RS10870;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9F04_RS10870;old_locus_tag=C9F04_11220
NZ_PYKF01000371.1	Protein Homology	CDS	7959	8195	.	+	0	ID=cds-WP_000157589.1;Parent=gene-C9F04_RS10870;Dbxref=Genbank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9F04_RS10870;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	8430	9356	.	+	.	ID=gene-C9F04_RS10875;Name=C9F04_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10875;old_locus_tag=C9F04_11225
NZ_PYKF01000371.1	Protein Homology	CDS	8430	9356	.	+	0	ID=cds-WP_023244632.1;Parent=gene-C9F04_RS10875;Dbxref=Genbank:WP_023244632.1;Name=WP_023244632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9F04_RS10875;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023244632.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	9392	10162	.	-	.	ID=gene-C9F04_RS10880;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9F04_RS10880;old_locus_tag=C9F04_11230
NZ_PYKF01000371.1	Protein Homology	CDS	9392	10162	.	-	0	ID=cds-WP_000998144.1;Parent=gene-C9F04_RS10880;Dbxref=Genbank:WP_000998144.1;Name=WP_000998144.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9F04_RS10880;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998144.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	10200	10883	.	+	.	ID=gene-C9F04_RS10885;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9F04_RS10885;old_locus_tag=C9F04_11235
NZ_PYKF01000371.1	Protein Homology	CDS	10200	10883	.	+	0	ID=cds-WP_000958733.1;Parent=gene-C9F04_RS10885;Dbxref=Genbank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9F04_RS10885;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	10942	11517	.	+	.	ID=gene-C9F04_RS10890;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9F04_RS10890;old_locus_tag=C9F04_11240
NZ_PYKF01000371.1	Protein Homology	CDS	10942	11517	.	+	0	ID=cds-WP_000619387.1;Parent=gene-C9F04_RS10890;Dbxref=Genbank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9F04_RS10890;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	11894	13210	.	+	.	ID=gene-C9F04_RS10895;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9F04_RS10895;old_locus_tag=C9F04_11245
NZ_PYKF01000371.1	Protein Homology	CDS	11894	13210	.	+	0	ID=cds-WP_001131741.1;Parent=gene-C9F04_RS10895;Dbxref=Genbank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9F04_RS10895;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11
NZ_PYKF01000371.1	RefSeq	gene	13329	15350	.	-	.	ID=gene-C9F04_RS10900;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9F04_RS10900;old_locus_tag=C9F04_11250
NZ_PYKF01000371.1	Protein Homology	CDS	13329	15350	.	-	0	ID=cds-WP_261770865.1;Parent=gene-C9F04_RS10900;Dbxref=Genbank:WP_261770865.1;Name=WP_261770865.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428711.1;locus_tag=C9F04_RS10900;product=4-alpha-glucanotransferase;protein_id=WP_261770865.1;transl_table=11
##sequence-region NZ_PYKF01000820.1 1 870
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000820.1	RefSeq	region	1	870	.	+	.	ID=NZ_PYKF01000820.1:1..870;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000820.1	RefSeq	gene	1	634	.	-	.	ID=gene-C9F04_RS25805;Name=C9F04_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25805;old_locus_tag=C9F04_26695;partial=true;start_range=.,1
NZ_PYKF01000820.1	Protein Homology	CDS	1	634	.	-	0	ID=cds-WP_146713366.1;Parent=gene-C9F04_RS25805;Dbxref=Genbank:WP_146713366.1;Name=WP_146713366.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156877.1;locus_tag=C9F04_RS25805;partial=true;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_146713366.1;start_range=.,1;transl_table=11
NZ_PYKF01000820.1	RefSeq	gene	644	870	.	-	.	ID=gene-C9F04_RS25810;Name=pduN;end_range=870,.;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9F04_RS25810;old_locus_tag=C9F04_26700;partial=true
NZ_PYKF01000820.1	Protein Homology	CDS	644	870	.	-	2	ID=cds-WP_146713367.1;Parent=gene-C9F04_RS25810;Dbxref=Genbank:WP_146713367.1;Name=WP_146713367.1;end_range=870,.;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9F04_RS25810;partial=true;product=propanediol utilization microcompartment protein PduN;protein_id=WP_146713367.1;transl_table=11
##sequence-region NZ_PYKF01000471.1 1 866
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000471.1	RefSeq	region	1	866	.	+	.	ID=NZ_PYKF01000471.1:1..866;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000471.1	RefSeq	gene	197	866	.	+	.	ID=gene-C9F04_RS14130;Name=C9F04_RS14130;end_range=866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14130;old_locus_tag=C9F04_14590;partial=true
NZ_PYKF01000471.1	Protein Homology	CDS	197	866	.	+	0	ID=cds-WP_186799031.1;Parent=gene-C9F04_RS14130;Dbxref=Genbank:WP_186799031.1;Name=WP_186799031.1;end_range=866,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071034.1;locus_tag=C9F04_RS14130;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_186799031.1;transl_table=11
##sequence-region NZ_PYKF01000363.1 1 860
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000363.1	RefSeq	region	1	860	.	+	.	ID=NZ_PYKF01000363.1:1..860;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000363.1	RefSeq	pseudogene	59	860	.	-	.	ID=gene-C9F04_RS10705;Name=C9F04_RS10705;end_range=860,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10705;old_locus_tag=C9F04_11040;partial=true;pseudo=true;start_range=.,59
NZ_PYKF01000363.1	Protein Homology	CDS	59	860	.	-	1	ID=cds-C9F04_RS10705;Parent=gene-C9F04_RS10705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=860,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F04_RS10705;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,59;transl_table=11
##sequence-region NZ_PYKF01000406.1 1 837
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000406.1	RefSeq	region	1	837	.	+	.	ID=NZ_PYKF01000406.1:1..837;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000406.1	RefSeq	pseudogene	1	837	.	+	.	ID=gene-C9F04_RS12035;Name=C9F04_RS12035;end_range=837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12035;old_locus_tag=C9F04_12450;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000406.1	Protein Homology	CDS	1	837	.	+	0	ID=cds-C9F04_RS12035;Parent=gene-C9F04_RS12035;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS12035;partial=true;product=oxaloacetate decarboxylase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000729.1 1 836
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000729.1	RefSeq	region	1	836	.	+	.	ID=NZ_PYKF01000729.1:1..836;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000729.1	RefSeq	gene	1	351	.	-	.	ID=gene-C9F04_RS22665;Name=C9F04_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22665;old_locus_tag=C9F04_23425;partial=true;start_range=.,1
NZ_PYKF01000729.1	Protein Homology	CDS	1	351	.	-	0	ID=cds-WP_146713215.1;Parent=gene-C9F04_RS22665;Dbxref=Genbank:WP_146713215.1;Name=WP_146713215.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460336.1;locus_tag=C9F04_RS22665;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146713215.1;start_range=.,1;transl_table=11
NZ_PYKF01000729.1	RefSeq	pseudogene	368	811	.	-	.	ID=gene-C9F04_RS22670;Name=C9F04_RS22670;end_range=811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22670;old_locus_tag=C9F04_23430;partial=true;pseudo=true
NZ_PYKF01000729.1	Protein Homology	CDS	368	811	.	-	0	ID=cds-C9F04_RS22670;Parent=gene-C9F04_RS22670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016226;end_range=811,.;gbkey=CDS;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F04_RS22670;partial=true;product=SufD family Fe-S cluster assembly protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000037.1 1 807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000037.1	RefSeq	region	1	807	.	+	.	ID=NZ_PYKF01000037.1:1..807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000037.1	RefSeq	pseudogene	1	807	.	+	.	ID=gene-C9F04_RS00560;Name=C9F04_RS00560;end_range=807,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00560;old_locus_tag=C9F04_00595;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000037.1	Protein Homology	CDS	1	807	.	+	2	ID=cds-C9F04_RS00560;Parent=gene-C9F04_RS00560;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F04_RS00560;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000303.1 1 803
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000303.1	RefSeq	region	1	803	.	+	.	ID=NZ_PYKF01000303.1:1..803;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000303.1	RefSeq	pseudogene	656	803	.	-	.	ID=gene-C9F04_RS26580;Name=C9F04_RS26580;end_range=803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26580;old_locus_tag=C9F04_09225;partial=true;pseudo=true
NZ_PYKF01000303.1	Protein Homology	CDS	656	803	.	-	1	ID=cds-C9F04_RS26580;Parent=gene-C9F04_RS26580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019844820.1;locus_tag=C9F04_RS26580;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000295.1 1 802
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000295.1	RefSeq	region	1	802	.	+	.	ID=NZ_PYKF01000295.1:1..802;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000295.1	RefSeq	gene	1	668	.	-	.	ID=gene-C9F04_RS08565;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9F04_RS08565;old_locus_tag=C9F04_08845;partial=true;start_range=.,1
NZ_PYKF01000295.1	Protein Homology	CDS	1	668	.	-	0	ID=cds-WP_146712505.1;Parent=gene-C9F04_RS08565;Dbxref=Genbank:WP_146712505.1;Name=WP_146712505.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9F04_RS08565;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_146712505.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000170.1 1 801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000170.1	RefSeq	region	1	801	.	+	.	ID=NZ_PYKF01000170.1:1..801;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000170.1	RefSeq	gene	5	801	.	+	.	ID=gene-C9F04_RS03625;Name=mglC;end_range=801,.;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9F04_RS03625;old_locus_tag=C9F04_03745;partial=true
NZ_PYKF01000170.1	Protein Homology	CDS	5	801	.	+	0	ID=cds-WP_146712301.1;Parent=gene-C9F04_RS03625;Dbxref=Genbank:WP_146712301.1;Name=WP_146712301.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016021;end_range=801,.;gbkey=CDS;gene=mglC;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F04_RS03625;partial=true;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_146712301.1;transl_table=11
##sequence-region NZ_PYKF01000131.1 1 793
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000131.1	RefSeq	region	1	793	.	+	.	ID=NZ_PYKF01000131.1:1..793;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000131.1	RefSeq	gene	1	793	.	+	.	ID=gene-C9F04_RS02640;Name=C9F04_RS02640;end_range=793,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02640;old_locus_tag=C9F04_02735;partial=true;start_range=.,1
NZ_PYKF01000131.1	Protein Homology	CDS	1	793	.	+	0	ID=cds-WP_146712254.1;Parent=gene-C9F04_RS02640;Dbxref=Genbank:WP_146712254.1;Name=WP_146712254.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=793,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F04_RS02640;partial=true;product=class I tRNA ligase family protein;protein_id=WP_146712254.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000601.1 1 15127
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000601.1	RefSeq	region	1	15127	.	+	.	ID=NZ_PYKF01000601.1:1..15127;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000601.1	RefSeq	gene	1	839	.	-	.	ID=gene-C9F04_RS17950;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9F04_RS17950;old_locus_tag=C9F04_18515;partial=true;start_range=.,1
NZ_PYKF01000601.1	Protein Homology	CDS	1	839	.	-	0	ID=cds-WP_146712975.1;Parent=gene-C9F04_RS17950;Dbxref=Genbank:WP_146712975.1;Name=WP_146712975.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9F04_RS17950;partial=true;product=peptidylprolyl isomerase SurA;protein_id=WP_146712975.1;start_range=.,1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	893	3253	.	-	.	ID=gene-C9F04_RS17955;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9F04_RS17955;old_locus_tag=C9F04_18520
NZ_PYKF01000601.1	Protein Homology	CDS	893	3253	.	-	0	ID=cds-WP_135369129.1;Parent=gene-C9F04_RS17955;Dbxref=Genbank:WP_135369129.1;Name=WP_135369129.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9F04_RS17955;product=LPS assembly protein LptD;protein_id=WP_135369129.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	3507	4319	.	+	.	ID=gene-C9F04_RS17960;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9F04_RS17960;old_locus_tag=C9F04_18525
NZ_PYKF01000601.1	Protein Homology	CDS	3507	4319	.	+	0	ID=cds-WP_001200595.1;Parent=gene-C9F04_RS17960;Dbxref=Genbank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9F04_RS17960;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	4414	5073	.	-	.	ID=gene-C9F04_RS17965;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9F04_RS17965;old_locus_tag=C9F04_18530
NZ_PYKF01000601.1	Protein Homology	CDS	4414	5073	.	-	0	ID=cds-WP_000525198.1;Parent=gene-C9F04_RS17965;Dbxref=Genbank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9F04_RS17965;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	5085	7991	.	-	.	ID=gene-C9F04_RS17970;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9F04_RS17970;old_locus_tag=C9F04_18535
NZ_PYKF01000601.1	Protein Homology	CDS	5085	7991	.	-	0	ID=cds-WP_146712976.1;Parent=gene-C9F04_RS17970;Dbxref=Genbank:WP_146712976.1;Name=WP_146712976.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9F04_RS17970;product=RNA polymerase-associated protein RapA;protein_id=WP_146712976.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	8165	10516	.	-	.	ID=gene-C9F04_RS17975;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9F04_RS17975;old_locus_tag=C9F04_18545
NZ_PYKF01000601.1	Protein Homology	CDS	8165	10516	.	-	0	ID=cds-WP_111742468.1;Parent=gene-C9F04_RS17975;Dbxref=Genbank:WP_111742468.1;Name=WP_111742468.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F04_RS17975;product=DNA polymerase II;protein_id=WP_111742468.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	10560	11180	.	-	.	ID=gene-C9F04_RS17980;Name=C9F04_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17980;old_locus_tag=C9F04_18550
NZ_PYKF01000601.1	Protein Homology	CDS	10560	11180	.	-	0	ID=cds-WP_135369130.1;Parent=gene-C9F04_RS17980;Dbxref=Genbank:WP_135369130.1;Name=WP_135369130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9F04_RS17980;product=YdcF family protein;protein_id=WP_135369130.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	11698	12117	.	+	.	ID=gene-C9F04_RS17990;Name=C9F04_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17990;old_locus_tag=C9F04_18560
NZ_PYKF01000601.1	Protein Homology	CDS	11698	12117	.	+	0	ID=cds-WP_001103149.1;Parent=gene-C9F04_RS17990;Dbxref=Genbank:WP_001103149.1;Name=WP_001103149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9F04_RS17990;product=DUF4751 family protein;protein_id=WP_001103149.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	12123	12818	.	-	.	ID=gene-C9F04_RS17995;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F04_RS17995;old_locus_tag=C9F04_18565
NZ_PYKF01000601.1	Protein Homology	CDS	12123	12818	.	-	0	ID=cds-WP_000888684.1;Parent=gene-C9F04_RS17995;Dbxref=Genbank:WP_000888684.1;Name=WP_000888684.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9F04_RS17995;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888684.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	12959	14461	.	-	.	ID=gene-C9F04_RS18000;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9F04_RS18000;old_locus_tag=C9F04_18570
NZ_PYKF01000601.1	Protein Homology	CDS	12959	14461	.	-	0	ID=cds-WP_135369488.1;Parent=gene-C9F04_RS18000;Dbxref=Genbank:WP_135369488.1;Name=WP_135369488.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9F04_RS18000;product=L-arabinose isomerase;protein_id=WP_135369488.1;transl_table=11
NZ_PYKF01000601.1	RefSeq	gene	14472	15127	.	-	.	ID=gene-C9F04_RS18005;Name=C9F04_RS18005;end_range=15127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18005;old_locus_tag=C9F04_18575;partial=true
NZ_PYKF01000601.1	Protein Homology	CDS	14472	15127	.	-	2	ID=cds-WP_261771347.1;Parent=gene-C9F04_RS18005;Dbxref=Genbank:WP_261771347.1;Name=WP_261771347.1;Ontology_term=GO:0005975,GO:0016773;end_range=15127,.;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9F04_RS18005;partial=true;product=FGGY-family carbohydrate kinase;protein_id=WP_261771347.1;transl_table=11
##sequence-region NZ_PYKF01000550.1 1 790
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000550.1	RefSeq	region	1	790	.	+	.	ID=NZ_PYKF01000550.1:1..790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000550.1	RefSeq	gene	1	760	.	-	.	ID=gene-C9F04_RS16510;Name=C9F04_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16510;old_locus_tag=C9F04_17010;partial=true;start_range=.,1
NZ_PYKF01000550.1	Protein Homology	CDS	1	760	.	-	0	ID=cds-WP_261771306.1;Parent=gene-C9F04_RS16510;Dbxref=Genbank:WP_261771306.1;Name=WP_261771306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024353.2;locus_tag=C9F04_RS16510;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_261771306.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000317.1 1 780
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000317.1	RefSeq	region	1	780	.	+	.	ID=NZ_PYKF01000317.1:1..780;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000317.1	RefSeq	gene	1	485	.	-	.	ID=gene-C9F04_RS09295;Name=C9F04_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09295;old_locus_tag=C9F04_09600;partial=true;start_range=.,1
NZ_PYKF01000317.1	Protein Homology	CDS	1	485	.	-	0	ID=cds-WP_146712536.1;Parent=gene-C9F04_RS09295;Dbxref=Genbank:WP_146712536.1;Name=WP_146712536.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9F04_RS09295;partial=true;product=GTP-binding protein;protein_id=WP_146712536.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000101.1 1 778
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000101.1	RefSeq	region	1	778	.	+	.	ID=NZ_PYKF01000101.1:1..778;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000101.1	RefSeq	gene	1	510	.	+	.	ID=gene-C9F04_RS01915;Name=C9F04_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01915;old_locus_tag=C9F04_02000;partial=true;start_range=.,1
NZ_PYKF01000101.1	Protein Homology	CDS	1	510	.	+	0	ID=cds-WP_146712216.1;Parent=gene-C9F04_RS01915;Dbxref=Genbank:WP_146712216.1;Name=WP_146712216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9F04_RS01915;partial=true;product=ATP-binding protein;protein_id=WP_146712216.1;start_range=.,1;transl_table=11
NZ_PYKF01000101.1	RefSeq	gene	507	778	.	+	.	ID=gene-C9F04_RS01920;Name=C9F04_RS01920;end_range=778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01920;old_locus_tag=C9F04_02005;partial=true
NZ_PYKF01000101.1	Protein Homology	CDS	507	778	.	+	0	ID=cds-WP_134952443.1;Parent=gene-C9F04_RS01920;Dbxref=Genbank:WP_134952443.1;Name=WP_134952443.1;Ontology_term=GO:0000160;end_range=778,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9F04_RS01920;partial=true;product=response regulator;protein_id=WP_134952443.1;transl_table=11
##sequence-region NZ_PYKF01000049.1 1 775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000049.1	RefSeq	region	1	775	.	+	.	ID=NZ_PYKF01000049.1:1..775;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000049.1	RefSeq	gene	1	756	.	+	.	ID=gene-C9F04_RS00885;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9F04_RS00885;old_locus_tag=C9F04_00940;partial=true;start_range=.,1
NZ_PYKF01000049.1	Protein Homology	CDS	1	756	.	+	0	ID=cds-WP_146712168.1;Parent=gene-C9F04_RS00885;Dbxref=Genbank:WP_146712168.1;Name=WP_146712168.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9F04_RS00885;partial=true;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_146712168.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000614.1 1 774
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000614.1	RefSeq	region	1	774	.	+	.	ID=NZ_PYKF01000614.1:1..774;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000614.1	RefSeq	pseudogene	1	325	.	-	.	ID=gene-C9F04_RS18460;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=pseudogene;locus_tag=C9F04_RS18460;old_locus_tag=C9F04_19065;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000614.1	Protein Homology	CDS	1	325	.	-	0	ID=cds-C9F04_RS18460;Parent=gene-C9F04_RS18460;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9F04_RS18460;partial=true;product=cell division protein ZapC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000614.1	RefSeq	pseudogene	491	774	.	-	.	ID=gene-C9F04_RS18465;Name=C9F04_RS18465;end_range=774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18465;old_locus_tag=C9F04_19070;partial=true;pseudo=true
NZ_PYKF01000614.1	Protein Homology	CDS	491	774	.	-	2	ID=cds-C9F04_RS18465;Parent=gene-C9F04_RS18465;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F04_RS18465;partial=true;product=quinone-dependent dihydroorotate dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000370.1 1 761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000370.1	RefSeq	region	1	761	.	+	.	ID=NZ_PYKF01000370.1:1..761;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000370.1	RefSeq	gene	1	761	.	-	.	ID=gene-C9F04_RS10835;Name=C9F04_RS10835;end_range=761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10835;old_locus_tag=C9F04_11180;partial=true;start_range=.,1
NZ_PYKF01000370.1	Protein Homology	CDS	1	761	.	-	1	ID=cds-WP_146712624.1;Parent=gene-C9F04_RS10835;Dbxref=Genbank:WP_146712624.1;Name=WP_146712624.1;end_range=761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9F04_RS10835;partial=true;product=transketolase family protein;protein_id=WP_146712624.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000294.1 1 759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000294.1	RefSeq	region	1	759	.	+	.	ID=NZ_PYKF01000294.1:1..759;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000294.1	RefSeq	pseudogene	36	692	.	-	.	ID=gene-C9F04_RS08560;Name=C9F04_RS08560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08560;old_locus_tag=C9F04_08840;partial=true;pseudo=true;start_range=.,36
NZ_PYKF01000294.1	Protein Homology	CDS	36	692	.	-	0	ID=cds-C9F04_RS08560;Parent=gene-C9F04_RS08560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006685356.1;locus_tag=C9F04_RS08560;partial=true;product=SLC13 family permease;pseudo=true;start_range=.,36;transl_table=11
##sequence-region NZ_PYKF01000048.1 1 736
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000048.1	RefSeq	region	1	736	.	+	.	ID=NZ_PYKF01000048.1:1..736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000048.1	RefSeq	pseudogene	1	736	.	-	.	ID=gene-C9F04_RS00880;Name=C9F04_RS00880;end_range=736,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00880;old_locus_tag=C9F04_00935;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000048.1	Protein Homology	CDS	1	736	.	-	2	ID=cds-C9F04_RS00880;Parent=gene-C9F04_RS00880;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310082.1;locus_tag=C9F04_RS00880;partial=true;product=TonB-dependent receptor;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000062.1 1 731
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000062.1	RefSeq	region	1	731	.	+	.	ID=NZ_PYKF01000062.1:1..731;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000062.1	RefSeq	pseudogene	66	716	.	+	.	ID=gene-C9F04_RS01190;Name=C9F04_RS01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01190;old_locus_tag=C9F04_01260;partial=true;pseudo=true;start_range=.,66
NZ_PYKF01000062.1	Protein Homology	CDS	66	716	.	+	0	ID=cds-C9F04_RS01190;Parent=gene-C9F04_RS01190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9F04_RS01190;partial=true;product=ABC transporter permease subunit;pseudo=true;start_range=.,66;transl_table=11
##sequence-region NZ_PYKF01000179.1 1 728
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000179.1	RefSeq	region	1	728	.	+	.	ID=NZ_PYKF01000179.1:1..728;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000179.1	RefSeq	gene	238	728	.	+	.	ID=gene-C9F04_RS04115;Name=C9F04_RS04115;end_range=728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04115;old_locus_tag=C9F04_04255;partial=true
NZ_PYKF01000179.1	Protein Homology	CDS	238	728	.	+	0	ID=cds-WP_146712319.1;Parent=gene-C9F04_RS04115;Dbxref=Genbank:WP_146712319.1;Name=WP_146712319.1;end_range=728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9F04_RS04115;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_146712319.1;transl_table=11
##sequence-region NZ_PYKF01000598.1 1 14826
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000598.1	RefSeq	region	1	14826	.	+	.	ID=NZ_PYKF01000598.1:1..14826;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000598.1	RefSeq	pseudogene	1	213	.	-	.	ID=gene-C9F04_RS17785;Name=C9F04_RS17785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS17785;old_locus_tag=C9F04_18350;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000598.1	Protein Homology	CDS	1	213	.	-	0	ID=cds-C9F04_RS17785;Parent=gene-C9F04_RS17785;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9F04_RS17785;partial=true;product=mannose-6-phosphate isomerase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	413	2059	.	+	.	ID=gene-C9F04_RS17790;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9F04_RS17790;old_locus_tag=C9F04_18355
NZ_PYKF01000598.1	Protein Homology	CDS	413	2059	.	+	0	ID=cds-WP_000066609.1;Parent=gene-C9F04_RS17790;Dbxref=Genbank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9F04_RS17790;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	2227	3630	.	+	.	ID=gene-C9F04_RS17795;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9F04_RS17795;old_locus_tag=C9F04_18360
NZ_PYKF01000598.1	Protein Homology	CDS	2227	3630	.	+	0	ID=cds-WP_023259073.1;Parent=gene-C9F04_RS17795;Dbxref=Genbank:WP_023259073.1;Name=WP_023259073.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9F04_RS17795;product=class II fumarate hydratase;protein_id=WP_023259073.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	3627	4556	.	-	.	ID=gene-C9F04_RS17800;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9F04_RS17800;old_locus_tag=C9F04_18365
NZ_PYKF01000598.1	Protein Homology	CDS	3627	4556	.	-	0	ID=cds-WP_135369666.1;Parent=gene-C9F04_RS17800;Dbxref=Genbank:WP_135369666.1;Name=WP_135369666.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9F04_RS17800;product=DNA replication terminus site-binding protein;protein_id=WP_135369666.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	4632	5933	.	-	.	ID=gene-C9F04_RS17805;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9F04_RS17805;old_locus_tag=C9F04_18370
NZ_PYKF01000598.1	Protein Homology	CDS	4632	5933	.	-	0	ID=cds-WP_146712967.1;Parent=gene-C9F04_RS17805;Dbxref=Genbank:WP_146712967.1;Name=WP_146712967.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=rstB;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9F04_RS17805;product=two-component system sensor histidine kinase RstB;protein_id=WP_146712967.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	6044	7750	.	-	.	ID=gene-C9F04_RS17810;Name=C9F04_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17810;old_locus_tag=C9F04_18375
NZ_PYKF01000598.1	Protein Homology	CDS	6044	7750	.	-	0	ID=cds-WP_135369663.1;Parent=gene-C9F04_RS17810;Dbxref=Genbank:WP_135369663.1;Name=WP_135369663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9F04_RS17810;product=amidohydrolase;protein_id=WP_135369663.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	7903	9054	.	-	.	ID=gene-C9F04_RS17815;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9F04_RS17815;old_locus_tag=C9F04_18380
NZ_PYKF01000598.1	Protein Homology	CDS	7903	9054	.	-	0	ID=cds-WP_000824313.1;Parent=gene-C9F04_RS17815;Dbxref=Genbank:WP_000824313.1;Name=WP_000824313.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9F04_RS17815;product=porin OmpS2;protein_id=WP_000824313.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	9534	10265	.	-	.	ID=gene-C9F04_RS17825;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9F04_RS17825;old_locus_tag=C9F04_18390
NZ_PYKF01000598.1	Protein Homology	CDS	9534	10265	.	-	0	ID=cds-WP_001080048.1;Parent=gene-C9F04_RS17825;Dbxref=Genbank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9F04_RS17825;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	10392	10727	.	+	.	ID=gene-C9F04_RS17830;Name=C9F04_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17830;old_locus_tag=C9F04_18395
NZ_PYKF01000598.1	Protein Homology	CDS	10392	10727	.	+	0	ID=cds-WP_000524877.1;Parent=gene-C9F04_RS17830;Dbxref=Genbank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9F04_RS17830;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	10789	12171	.	-	.	ID=gene-C9F04_RS17835;Name=C9F04_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17835;old_locus_tag=C9F04_18400
NZ_PYKF01000598.1	Protein Homology	CDS	10789	12171	.	-	0	ID=cds-WP_000412353.1;Parent=gene-C9F04_RS17835;Dbxref=Genbank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9F04_RS17835;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	12470	13414	.	-	.	ID=gene-C9F04_RS17840;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9F04_RS17840;old_locus_tag=C9F04_18405
NZ_PYKF01000598.1	Protein Homology	CDS	12470	13414	.	-	0	ID=cds-WP_000769294.1;Parent=gene-C9F04_RS17840;Dbxref=Genbank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9F04_RS17840;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11
NZ_PYKF01000598.1	RefSeq	pseudogene	13411	13490	.	-	.	ID=gene-C9F04_RS27145;Name=C9F04_RS27145;end_range=13490,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27145;partial=true;pseudo=true
NZ_PYKF01000598.1	Protein Homology	CDS	13411	13490	.	-	0	ID=cds-C9F04_RS27145;Parent=gene-C9F04_RS27145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13490,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=C9F04_RS27145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000598.1	RefSeq	gene	13941	14826	.	+	.	ID=gene-C9F04_RS17845;Name=pntA;end_range=14826,.;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9F04_RS17845;old_locus_tag=C9F04_18410;partial=true
NZ_PYKF01000598.1	Protein Homology	CDS	13941	14826	.	+	0	ID=cds-WP_146712968.1;Parent=gene-C9F04_RS17845;Dbxref=Genbank:WP_146712968.1;Name=WP_146712968.1;Ontology_term=GO:0008750;end_range=14826,.;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9F04_RS17845;partial=true;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_146712968.1;transl_table=11
##sequence-region NZ_PYKF01000395.1 1 34127
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000395.1	RefSeq	region	1	34127	.	+	.	ID=NZ_PYKF01000395.1:1..34127;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000395.1	RefSeq	pseudogene	1	293	.	+	.	ID=gene-C9F04_RS11560;Name=C9F04_RS11560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11560;old_locus_tag=C9F04_11955;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000395.1	Protein Homology	CDS	1	293	.	+	2	ID=cds-C9F04_RS11560;Parent=gene-C9F04_RS11560;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F04_RS11560;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	853	1569	.	+	.	ID=gene-C9F04_RS11570;Name=C9F04_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11570;old_locus_tag=C9F04_11965
NZ_PYKF01000395.1	Protein Homology	CDS	853	1569	.	+	0	ID=cds-WP_000532939.1;Parent=gene-C9F04_RS11570;Dbxref=Genbank:WP_000532939.1;Name=WP_000532939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=C9F04_RS11570;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	2046	2921	.	-	.	ID=gene-C9F04_RS11575;Name=C9F04_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11575;old_locus_tag=C9F04_11970
NZ_PYKF01000395.1	Protein Homology	CDS	2046	2921	.	-	0	ID=cds-WP_000199884.1;Parent=gene-C9F04_RS11575;Dbxref=Genbank:WP_000199884.1;Name=WP_000199884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=C9F04_RS11575;product=HNH endonuclease;protein_id=WP_000199884.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	3274	3696	.	-	.	ID=gene-C9F04_RS11580;Name=C9F04_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11580;old_locus_tag=C9F04_11975
NZ_PYKF01000395.1	Protein Homology	CDS	3274	3696	.	-	0	ID=cds-WP_058653118.1;Parent=gene-C9F04_RS11580;Dbxref=Genbank:WP_058653118.1;Name=WP_058653118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=C9F04_RS11580;product=fosfomycin resistance glutathione transferase FosA7.7;protein_id=WP_058653118.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	3820	3987	.	+	.	ID=gene-C9F04_RS26600;Name=C9F04_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26600
NZ_PYKF01000395.1	GeneMarkS-2+	CDS	3820	3987	.	+	0	ID=cds-WP_162798837.1;Parent=gene-C9F04_RS26600;Dbxref=Genbank:WP_162798837.1;Name=WP_162798837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26600;product=hypothetical protein;protein_id=WP_162798837.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	4129	6246	.	-	.	ID=gene-C9F04_RS11585;Name=C9F04_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11585;old_locus_tag=C9F04_11980
NZ_PYKF01000395.1	Protein Homology	CDS	4129	6246	.	-	0	ID=cds-WP_058653117.1;Parent=gene-C9F04_RS11585;Dbxref=Genbank:WP_058653117.1;Name=WP_058653117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=C9F04_RS11585;product=ATP-dependent helicase;protein_id=WP_058653117.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	pseudogene	6243	12584	.	-	.	ID=gene-C9F04_RS11590;Name=C9F04_RS11590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11590;old_locus_tag=C9F04_11985;pseudo=true
NZ_PYKF01000395.1	Protein Homology	CDS	6243	12584	.	-	0	ID=cds-C9F04_RS11590;Parent=gene-C9F04_RS11590;Note=internal stop;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=C9F04_RS11590;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	12584	17524	.	-	.	ID=gene-C9F04_RS11595;Name=C9F04_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11595;old_locus_tag=C9F04_11990
NZ_PYKF01000395.1	Protein Homology	CDS	12584	17524	.	-	0	ID=cds-WP_146712658.1;Parent=gene-C9F04_RS11595;Dbxref=Genbank:WP_146712658.1;Name=WP_146712658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313289.1;locus_tag=C9F04_RS11595;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_146712658.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	pseudogene	17527	20385	.	-	.	ID=gene-C9F04_RS11600;Name=C9F04_RS11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11600;old_locus_tag=C9F04_11995;pseudo=true
NZ_PYKF01000395.1	Protein Homology	CDS	17527	20385	.	-	0	ID=cds-C9F04_RS11600;Parent=gene-C9F04_RS11600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=C9F04_RS11600;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	21003	21782	.	-	.	ID=gene-C9F04_RS11605;Name=C9F04_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11605;old_locus_tag=C9F04_12000
NZ_PYKF01000395.1	Protein Homology	CDS	21003	21782	.	-	0	ID=cds-WP_058653113.1;Parent=gene-C9F04_RS11605;Dbxref=Genbank:WP_058653113.1;Name=WP_058653113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=C9F04_RS11605;product=HNH endonuclease;protein_id=WP_058653113.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	21943	22257	.	+	.	ID=gene-C9F04_RS11610;Name=C9F04_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11610;old_locus_tag=C9F04_12005
NZ_PYKF01000395.1	Protein Homology	CDS	21943	22257	.	+	0	ID=cds-WP_058653112.1;Parent=gene-C9F04_RS11610;Dbxref=Genbank:WP_058653112.1;Name=WP_058653112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=C9F04_RS11610;product=hypothetical protein;protein_id=WP_058653112.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	pseudogene	22254	22540	.	-	.	ID=gene-C9F04_RS11615;Name=C9F04_RS11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11615;old_locus_tag=C9F04_12010;pseudo=true
NZ_PYKF01000395.1	Protein Homology	CDS	22254	22540	.	-	0	ID=cds-C9F04_RS11615;Parent=gene-C9F04_RS11615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9F04_RS11615;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	22759	22843	.	-	.	ID=gene-C9F04_RS11620;Name=C9F04_RS11620;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS11620;old_locus_tag=C9F04_12015
NZ_PYKF01000395.1	tRNAscan-SE	tRNA	22759	22843	.	-	.	ID=rna-C9F04_RS11620;Parent=gene-C9F04_RS11620;anticodon=(pos:complement(22807..22809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11620;product=tRNA-Leu
NZ_PYKF01000395.1	tRNAscan-SE	exon	22759	22843	.	-	.	ID=exon-C9F04_RS11620-1;Parent=rna-C9F04_RS11620;anticodon=(pos:complement(22807..22809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS11620;product=tRNA-Leu
NZ_PYKF01000395.1	RefSeq	gene	23066	24085	.	+	.	ID=gene-C9F04_RS11625;Name=C9F04_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11625;old_locus_tag=C9F04_12020
NZ_PYKF01000395.1	Protein Homology	CDS	23066	24085	.	+	0	ID=cds-WP_146712659.1;Parent=gene-C9F04_RS11625;Dbxref=Genbank:WP_146712659.1;Name=WP_146712659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9F04_RS11625;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_146712659.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	24113	24643	.	-	.	ID=gene-C9F04_RS11630;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9F04_RS11630;old_locus_tag=C9F04_12025
NZ_PYKF01000395.1	Protein Homology	CDS	24113	24643	.	-	0	ID=cds-WP_000896756.1;Parent=gene-C9F04_RS11630;Dbxref=Genbank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9F04_RS11630;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	24860	25891	.	+	.	ID=gene-C9F04_RS11635;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9F04_RS11635;old_locus_tag=C9F04_12030
NZ_PYKF01000395.1	Protein Homology	CDS	24860	25891	.	+	0	ID=cds-WP_000453351.1;Parent=gene-C9F04_RS11635;Dbxref=Genbank:WP_000453351.1;Name=WP_000453351.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9F04_RS11635;product=L-idonate 5-dehydrogenase;protein_id=WP_000453351.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	25916	26680	.	+	.	ID=gene-C9F04_RS11640;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9F04_RS11640;old_locus_tag=C9F04_12035
NZ_PYKF01000395.1	Protein Homology	CDS	25916	26680	.	+	0	ID=cds-WP_146712660.1;Parent=gene-C9F04_RS11640;Dbxref=Genbank:WP_146712660.1;Name=WP_146712660.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9F04_RS11640;product=gluconate 5-dehydrogenase;protein_id=WP_146712660.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	26742	28061	.	+	.	ID=gene-C9F04_RS11645;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9F04_RS11645;old_locus_tag=C9F04_12040
NZ_PYKF01000395.1	Protein Homology	CDS	26742	28061	.	+	0	ID=cds-WP_001128352.1;Parent=gene-C9F04_RS11645;Dbxref=Genbank:WP_001128352.1;Name=WP_001128352.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F04_RS11645;product=gnt-II system L-idonate transporter;protein_id=WP_001128352.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	28125	29123	.	+	.	ID=gene-C9F04_RS11650;Name=C9F04_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11650;old_locus_tag=C9F04_12045
NZ_PYKF01000395.1	Protein Homology	CDS	28125	29123	.	+	0	ID=cds-WP_001244065.1;Parent=gene-C9F04_RS11650;Dbxref=Genbank:WP_001244065.1;Name=WP_001244065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9F04_RS11650;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001244065.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	29341	30423	.	-	.	ID=gene-C9F04_RS11655;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9F04_RS11655;old_locus_tag=C9F04_12050
NZ_PYKF01000395.1	Protein Homology	CDS	29341	30423	.	-	0	ID=cds-WP_001182242.1;Parent=gene-C9F04_RS11655;Dbxref=Genbank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9F04_RS11655;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	30423	31523	.	-	.	ID=gene-C9F04_RS11660;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9F04_RS11660;old_locus_tag=C9F04_12055
NZ_PYKF01000395.1	Protein Homology	CDS	30423	31523	.	-	0	ID=cds-WP_000584132.1;Parent=gene-C9F04_RS11660;Dbxref=Genbank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9F04_RS11660;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	31587	31637	.	-	.	ID=gene-C9F04_RS26775;Name=C9F04_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26775
NZ_PYKF01000395.1	Protein Homology	CDS	31587	31637	.	-	0	ID=cds-WP_212724070.1;Parent=gene-C9F04_RS26775;Dbxref=Genbank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9F04_RS26775;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	31918	33429	.	+	.	ID=gene-C9F04_RS11665;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9F04_RS11665;old_locus_tag=C9F04_12070
NZ_PYKF01000395.1	Protein Homology	CDS	31918	33429	.	+	0	ID=cds-WP_146712661.1;Parent=gene-C9F04_RS11665;Dbxref=Genbank:WP_146712661.1;Name=WP_146712661.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9F04_RS11665;product=leucyl aminopeptidase;protein_id=WP_146712661.1;transl_table=11
NZ_PYKF01000395.1	RefSeq	gene	33566	34009	.	+	.	ID=gene-C9F04_RS11670;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9F04_RS11670;old_locus_tag=C9F04_12075
NZ_PYKF01000395.1	Protein Homology	CDS	33566	34009	.	+	0	ID=cds-WP_001523689.1;Parent=gene-C9F04_RS11670;Dbxref=Genbank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9F04_RS11670;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11
##sequence-region NZ_PYKF01000802.1 1 724
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000802.1	RefSeq	region	1	724	.	+	.	ID=NZ_PYKF01000802.1:1..724;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000802.1	RefSeq	gene	1	257	.	+	.	ID=gene-C9F04_RS25015;Name=C9F04_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25015;old_locus_tag=C9F04_25875;partial=true;start_range=.,1
NZ_PYKF01000802.1	Protein Homology	CDS	1	257	.	+	2	ID=cds-WP_261771504.1;Parent=gene-C9F04_RS25015;Dbxref=Genbank:WP_261771504.1;Name=WP_261771504.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9F04_RS25015;partial=true;product=SulA-like leucine-rich domain-containing protein;protein_id=WP_261771504.1;start_range=.,1;transl_table=11
NZ_PYKF01000802.1	RefSeq	pseudogene	614	724	.	+	.	ID=gene-C9F04_RS25020;Name=C9F04_RS25020;end_range=724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25020;old_locus_tag=C9F04_25880;partial=true;pseudo=true
NZ_PYKF01000802.1	Protein Homology	CDS	614	724	.	+	0	ID=cds-C9F04_RS25020;Parent=gene-C9F04_RS25020;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9F04_RS25020;partial=true;product=porin OmpA;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000262.1 1 722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000262.1	RefSeq	region	1	722	.	+	.	ID=NZ_PYKF01000262.1:1..722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000262.1	RefSeq	pseudogene	1	722	.	-	.	ID=gene-C9F04_RS07335;Name=C9F04_RS07335;end_range=722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07335;old_locus_tag=C9F04_07580;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000262.1	Protein Homology	CDS	1	722	.	-	0	ID=cds-C9F04_RS07335;Parent=gene-C9F04_RS07335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F04_RS07335;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000651.1 1 714
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000651.1	RefSeq	region	1	714	.	+	.	ID=NZ_PYKF01000651.1:1..714;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000651.1	RefSeq	gene	1	714	.	-	.	ID=gene-C9F04_RS19970;Name=C9F04_RS19970;end_range=714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19970;old_locus_tag=C9F04_20625;partial=true;start_range=.,1
NZ_PYKF01000651.1	Protein Homology	CDS	1	714	.	-	2	ID=cds-WP_146713068.1;Parent=gene-C9F04_RS19970;Dbxref=Genbank:WP_146713068.1;Name=WP_146713068.1;end_range=714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F04_RS19970;partial=true;product=carboxylesterase family protein;protein_id=WP_146713068.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000185.1 1 696
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000185.1	RefSeq	region	1	696	.	+	.	ID=NZ_PYKF01000185.1:1..696;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000185.1	RefSeq	pseudogene	1	696	.	+	.	ID=gene-C9F04_RS04215;Name=C9F04_RS04215;end_range=696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04215;old_locus_tag=C9F04_04355;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000185.1	Protein Homology	CDS	1	696	.	+	1	ID=cds-C9F04_RS04215;Parent=gene-C9F04_RS04215;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0016226;end_range=696,.;gbkey=CDS;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F04_RS04215;partial=true;product=SufD family Fe-S cluster assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000063.1 1 694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000063.1	RefSeq	region	1	694	.	+	.	ID=NZ_PYKF01000063.1:1..694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000063.1	RefSeq	gene	1	239	.	-	.	ID=gene-C9F04_RS01195;Name=C9F04_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01195;old_locus_tag=C9F04_01265;partial=true;start_range=.,1
NZ_PYKF01000063.1	Protein Homology	CDS	1	239	.	-	0	ID=cds-WP_261770728.1;Parent=gene-C9F04_RS01195;Dbxref=Genbank:WP_261770728.1;Name=WP_261770728.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9F04_RS01195;partial=true;product=SulA-like leucine-rich domain-containing protein;protein_id=WP_261770728.1;start_range=.,1;transl_table=11
NZ_PYKF01000063.1	RefSeq	gene	456	694	.	+	.	ID=gene-C9F04_RS01200;Name=C9F04_RS01200;end_range=694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01200;old_locus_tag=C9F04_01270;partial=true
NZ_PYKF01000063.1	Protein Homology	CDS	456	694	.	+	0	ID=cds-WP_146712182.1;Parent=gene-C9F04_RS01200;Dbxref=Genbank:WP_146712182.1;Name=WP_146712182.1;end_range=694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9F04_RS01200;partial=true;product=TfoX/Sxy family protein;protein_id=WP_146712182.1;transl_table=11
##sequence-region NZ_PYKF01000569.1 1 694
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000569.1	RefSeq	region	1	694	.	+	.	ID=NZ_PYKF01000569.1:1..694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000569.1	RefSeq	gene	1	694	.	-	.	ID=gene-C9F04_RS16990;Name=C9F04_RS16990;end_range=694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16990;old_locus_tag=C9F04_17535;partial=true;start_range=.,1
NZ_PYKF01000569.1	Protein Homology	CDS	1	694	.	-	1	ID=cds-WP_261771326.1;Parent=gene-C9F04_RS16990;Dbxref=Genbank:WP_261771326.1;Name=WP_261771326.1;end_range=694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434218.1;locus_tag=C9F04_RS16990;partial=true;product=DUF4034 domain-containing protein;protein_id=WP_261771326.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000442.1 1 685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000442.1	RefSeq	region	1	685	.	+	.	ID=NZ_PYKF01000442.1:1..685;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000442.1	RefSeq	gene	1	197	.	+	.	ID=gene-C9F04_RS13290;Name=C9F04_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13290;old_locus_tag=C9F04_13725;partial=true;start_range=.,1
NZ_PYKF01000442.1	Protein Homology	CDS	1	197	.	+	2	ID=cds-WP_146712742.1;Parent=gene-C9F04_RS13290;Dbxref=Genbank:WP_146712742.1;Name=WP_146712742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9F04_RS13290;partial=true;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_146712742.1;start_range=.,1;transl_table=11
NZ_PYKF01000442.1	RefSeq	gene	194	475	.	-	.	ID=gene-C9F04_RS13295;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9F04_RS13295;old_locus_tag=C9F04_13730
NZ_PYKF01000442.1	Protein Homology	CDS	194	475	.	-	0	ID=cds-WP_135369155.1;Parent=gene-C9F04_RS13295;Dbxref=Genbank:WP_135369155.1;Name=WP_135369155.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9F04_RS13295;product=acylphosphatase;protein_id=WP_135369155.1;transl_table=11
NZ_PYKF01000442.1	RefSeq	gene	524	685	.	-	.	ID=gene-C9F04_RS13300;Name=C9F04_RS13300;end_range=685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS13300;old_locus_tag=C9F04_13735;partial=true
NZ_PYKF01000442.1	Protein Homology	CDS	524	685	.	-	0	ID=cds-WP_146712743.1;Parent=gene-C9F04_RS13300;Dbxref=Genbank:WP_146712743.1;Name=WP_146712743.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=685,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9F04_RS13300;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_146712743.1;transl_table=11
##sequence-region NZ_PYKF01000469.1 1 680
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000469.1	RefSeq	region	1	680	.	+	.	ID=NZ_PYKF01000469.1:1..680;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000469.1	RefSeq	pseudogene	1	680	.	+	.	ID=gene-C9F04_RS14115;Name=C9F04_RS14115;end_range=680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14115;old_locus_tag=C9F04_14570;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000469.1	Protein Homology	CDS	1	680	.	+	0	ID=cds-C9F04_RS14115;Parent=gene-C9F04_RS14115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9F04_RS14115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000776.1 1 680
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000776.1	RefSeq	region	1	680	.	+	.	ID=NZ_PYKF01000776.1:1..680;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000776.1	RefSeq	pseudogene	1	213	.	-	.	ID=gene-C9F04_RS24280;Name=C9F04_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24280;old_locus_tag=C9F04_25100;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000776.1	Protein Homology	CDS	1	213	.	-	0	ID=cds-C9F04_RS24280;Parent=gene-C9F04_RS24280;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9F04_RS24280;partial=true;product=four-carbon acid sugar kinase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000776.1	RefSeq	pseudogene	210	680	.	-	.	ID=gene-C9F04_RS24285;Name=C9F04_RS24285;end_range=680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24285;old_locus_tag=C9F04_25105;partial=true;pseudo=true
NZ_PYKF01000776.1	Protein Homology	CDS	210	680	.	-	0	ID=cds-C9F04_RS24285;Parent=gene-C9F04_RS24285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151725.1;locus_tag=C9F04_RS24285;partial=true;product=2-keto-3-deoxygluconate permease 1;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000531.1 1 671
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000531.1	RefSeq	region	1	671	.	+	.	ID=NZ_PYKF01000531.1:1..671;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000531.1	RefSeq	gene	5	671	.	-	.	ID=gene-C9F04_RS15930;Name=C9F04_RS15930;end_range=671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15930;old_locus_tag=C9F04_16425;partial=true
NZ_PYKF01000531.1	Protein Homology	CDS	5	671	.	-	1	ID=cds-WP_261771282.1;Parent=gene-C9F04_RS15930;Dbxref=Genbank:WP_261771282.1;Name=WP_261771282.1;end_range=671,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=C9F04_RS15930;partial=true;product=restriction endonuclease subunit S;protein_id=WP_261771282.1;transl_table=11
##sequence-region NZ_PYKF01000624.1 1 14542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000624.1	RefSeq	region	1	14542	.	+	.	ID=NZ_PYKF01000624.1:1..14542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000624.1	RefSeq	gene	1	2535	.	-	.	ID=gene-C9F04_RS18900;Name=C9F04_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18900;old_locus_tag=C9F04_19515;partial=true;start_range=.,1
NZ_PYKF01000624.1	Protein Homology	CDS	1	2535	.	-	0	ID=cds-WP_146713014.1;Parent=gene-C9F04_RS18900;Dbxref=Genbank:WP_146713014.1;Name=WP_146713014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9F04_RS18900;partial=true;product=fimbrial outer membrane usher protein;protein_id=WP_146713014.1;start_range=.,1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	2519	3280	.	-	.	ID=gene-C9F04_RS18905;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9F04_RS18905;old_locus_tag=C9F04_19520
NZ_PYKF01000624.1	Protein Homology	CDS	2519	3280	.	-	0	ID=cds-WP_079897707.1;Parent=gene-C9F04_RS18905;Dbxref=Genbank:WP_079897707.1;Name=WP_079897707.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9F04_RS18905;product=fimbrial biogenesis chaperone StbB;protein_id=WP_079897707.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	3342	3878	.	-	.	ID=gene-C9F04_RS18910;Name=C9F04_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18910;old_locus_tag=C9F04_19525
NZ_PYKF01000624.1	Protein Homology	CDS	3342	3878	.	-	0	ID=cds-WP_000062035.1;Parent=gene-C9F04_RS18910;Dbxref=Genbank:WP_000062035.1;Name=WP_000062035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9F04_RS18910;product=type 1 fimbrial protein;protein_id=WP_000062035.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	4512	5276	.	+	.	ID=gene-C9F04_RS18915;Name=C9F04_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18915;old_locus_tag=C9F04_19535
NZ_PYKF01000624.1	Protein Homology	CDS	4512	5276	.	+	0	ID=cds-WP_000968558.1;Parent=gene-C9F04_RS18915;Dbxref=Genbank:WP_000968558.1;Name=WP_000968558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9F04_RS18915;product=membrane protein;protein_id=WP_000968558.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	pseudogene	5249	5549	.	+	.	ID=gene-C9F04_RS18920;Name=C9F04_RS18920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18920;old_locus_tag=C9F04_19540;pseudo=true
NZ_PYKF01000624.1	Protein Homology	CDS	5249	5549	.	+	0	ID=cds-C9F04_RS18920;Parent=gene-C9F04_RS18920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9F04_RS18920;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	6051	7625	.	+	.	ID=gene-C9F04_RS18925;Name=C9F04_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18925;old_locus_tag=C9F04_19545
NZ_PYKF01000624.1	Protein Homology	CDS	6051	7625	.	+	0	ID=cds-WP_135369132.1;Parent=gene-C9F04_RS18925;Dbxref=Genbank:WP_135369132.1;Name=WP_135369132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9F04_RS18925;product=EAL domain-containing protein;protein_id=WP_135369132.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	7725	8468	.	+	.	ID=gene-C9F04_RS18930;Name=C9F04_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18930;old_locus_tag=C9F04_19550
NZ_PYKF01000624.1	Protein Homology	CDS	7725	8468	.	+	0	ID=cds-WP_058107948.1;Parent=gene-C9F04_RS18930;Dbxref=Genbank:WP_058107948.1;Name=WP_058107948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9F04_RS18930;product=hypothetical protein;protein_id=WP_058107948.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	8441	8929	.	+	.	ID=gene-C9F04_RS18935;Name=C9F04_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18935;old_locus_tag=C9F04_19555
NZ_PYKF01000624.1	Protein Homology	CDS	8441	8929	.	+	0	ID=cds-WP_000545426.1;Parent=gene-C9F04_RS18935;Dbxref=Genbank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9F04_RS18935;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	9331	9855	.	+	.	ID=gene-C9F04_RS18940;Name=C9F04_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18940;old_locus_tag=C9F04_19560
NZ_PYKF01000624.1	Protein Homology	CDS	9331	9855	.	+	0	ID=cds-WP_000830237.1;Parent=gene-C9F04_RS18940;Dbxref=Genbank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9F04_RS18940;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	9999	10640	.	+	.	ID=gene-C9F04_RS18945;Name=C9F04_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18945;old_locus_tag=C9F04_19565
NZ_PYKF01000624.1	Protein Homology	CDS	9999	10640	.	+	0	ID=cds-WP_000610827.1;Parent=gene-C9F04_RS18945;Dbxref=Genbank:WP_000610827.1;Name=WP_000610827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9F04_RS18945;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	10651	10875	.	+	.	ID=gene-C9F04_RS18950;Name=C9F04_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18950;old_locus_tag=C9F04_19570
NZ_PYKF01000624.1	Protein Homology	CDS	10651	10875	.	+	0	ID=cds-WP_000737125.1;Parent=gene-C9F04_RS18950;Dbxref=Genbank:WP_000737125.1;Name=WP_000737125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9F04_RS18950;product=membrane protein;protein_id=WP_000737125.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	gene	10933	11292	.	+	.	ID=gene-C9F04_RS18955;Name=C9F04_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18955;old_locus_tag=C9F04_19575
NZ_PYKF01000624.1	Protein Homology	CDS	10933	11292	.	+	0	ID=cds-WP_000722978.1;Parent=gene-C9F04_RS18955;Dbxref=Genbank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9F04_RS18955;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11
NZ_PYKF01000624.1	RefSeq	pseudogene	11362	12819	.	-	.	ID=gene-C9F04_RS18960;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=pseudogene;locus_tag=C9F04_RS18960;old_locus_tag=C9F04_19580;pseudo=true
NZ_PYKF01000624.1	Protein Homology	CDS	11362	12819	.	-	0	ID=cds-C9F04_RS18960;Parent=gene-C9F04_RS18960;Note=internal stop;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9F04_RS18960;product=multidrug efflux transporter outer membrane subunit MdsC;pseudo=true;transl_table=11
NZ_PYKF01000624.1	RefSeq	pseudogene	12836	14542	.	-	.	ID=gene-C9F04_RS18965;Name=mdsB;end_range=14542,.;gbkey=Gene;gene=mdsB;gene_biotype=pseudogene;locus_tag=C9F04_RS18965;old_locus_tag=C9F04_19585;partial=true;pseudo=true
NZ_PYKF01000624.1	Protein Homology	CDS	12836	14542	.	-	0	ID=cds-C9F04_RS18965;Parent=gene-C9F04_RS18965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14542,.;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F04_RS18965;partial=true;product=multidrug efflux RND transporter permease subunit MdsB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000051.1 1 665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000051.1	RefSeq	region	1	665	.	+	.	ID=NZ_PYKF01000051.1:1..665;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000051.1	RefSeq	pseudogene	71	665	.	-	.	ID=gene-C9F04_RS00900;Name=C9F04_RS00900;end_range=665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00900;old_locus_tag=C9F04_00955;partial=true;pseudo=true;start_range=.,71
NZ_PYKF01000051.1	Protein Homology	CDS	71	665	.	-	1	ID=cds-C9F04_RS00900;Parent=gene-C9F04_RS00900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=665,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149739.1;locus_tag=C9F04_RS00900;partial=true;product=molybdopterin-dependent oxidoreductase;pseudo=true;start_range=.,71;transl_table=11
##sequence-region NZ_PYKF01000052.1 1 662
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000052.1	RefSeq	region	1	662	.	+	.	ID=NZ_PYKF01000052.1:1..662;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000052.1	RefSeq	gene	123	662	.	+	.	ID=gene-C9F04_RS00905;Name=C9F04_RS00905;end_range=662,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS00905;old_locus_tag=C9F04_00960;partial=true
NZ_PYKF01000052.1	cmsearch	rRNA	123	662	.	+	.	ID=rna-C9F04_RS00905;Parent=gene-C9F04_RS00905;Dbxref=RFAM:RF02541;end_range=662,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00905;partial=true;product=23S ribosomal RNA
NZ_PYKF01000052.1	cmsearch	exon	123	662	.	+	.	ID=exon-C9F04_RS00905-1;Parent=rna-C9F04_RS00905;Dbxref=RFAM:RF02541;end_range=662,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00905;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PYKF01000468.1 1 658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000468.1	RefSeq	region	1	658	.	+	.	ID=NZ_PYKF01000468.1:1..658;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000468.1	RefSeq	pseudogene	1	658	.	-	.	ID=gene-C9F04_RS14110;Name=C9F04_RS14110;end_range=658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14110;old_locus_tag=C9F04_14565;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000468.1	Protein Homology	CDS	1	658	.	-	2	ID=cds-C9F04_RS14110;Parent=gene-C9F04_RS14110;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=658,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F04_RS14110;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000523.1 1 651
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000523.1	RefSeq	region	1	651	.	+	.	ID=NZ_PYKF01000523.1:1..651;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000523.1	RefSeq	pseudogene	360	651	.	+	.	ID=gene-C9F04_RS15725;Name=C9F04_RS15725;end_range=651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15725;old_locus_tag=C9F04_16215;partial=true;pseudo=true
NZ_PYKF01000523.1	Protein Homology	CDS	360	651	.	+	0	ID=cds-C9F04_RS15725;Parent=gene-C9F04_RS15725;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845073.1;locus_tag=C9F04_RS15725;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000482.1 1 650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000482.1	RefSeq	region	1	650	.	+	.	ID=NZ_PYKF01000482.1:1..650;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000482.1	RefSeq	pseudogene	1	650	.	-	.	ID=gene-C9F04_RS14435;Name=C9F04_RS14435;end_range=650,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14435;old_locus_tag=C9F04_14905;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000482.1	Protein Homology	CDS	1	650	.	-	1	ID=cds-C9F04_RS14435;Parent=gene-C9F04_RS14435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9F04_RS14435;partial=true;product=miniconductance mechanosensitive channel MscM;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000618.1 1 643
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000618.1	RefSeq	region	1	643	.	+	.	ID=NZ_PYKF01000618.1:1..643;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000618.1	RefSeq	pseudogene	12	643	.	+	.	ID=gene-C9F04_RS18730;Name=pheT;end_range=643,.;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=C9F04_RS18730;old_locus_tag=C9F04_19345;partial=true;pseudo=true
NZ_PYKF01000618.1	Protein Homology	CDS	12	643	.	+	0	ID=cds-C9F04_RS18730;Parent=gene-C9F04_RS18730;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=643,.;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F04_RS18730;partial=true;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000646.1 1 630
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000646.1	RefSeq	region	1	630	.	+	.	ID=NZ_PYKF01000646.1:1..630;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000646.1	RefSeq	gene	1	630	.	+	.	ID=gene-C9F04_RS19870;Name=C9F04_RS19870;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19870;old_locus_tag=C9F04_20525;partial=true;start_range=.,1
NZ_PYKF01000646.1	Protein Homology	CDS	1	630	.	+	2	ID=cds-WP_186799060.1;Parent=gene-C9F04_RS19870;Dbxref=Genbank:WP_186799060.1;Name=WP_186799060.1;Ontology_term=GO:0055085,GO:0022857;end_range=630,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F04_RS19870;partial=true;product=purine/pyrimidine permease;protein_id=WP_186799060.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000315.1 1 619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000315.1	RefSeq	region	1	619	.	+	.	ID=NZ_PYKF01000315.1:1..619;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000315.1	RefSeq	pseudogene	1	610	.	-	.	ID=gene-C9F04_RS09260;Name=C9F04_RS09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS09260;old_locus_tag=C9F04_09565;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000315.1	Protein Homology	CDS	1	610	.	-	0	ID=cds-C9F04_RS09260;Parent=gene-C9F04_RS09260;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9F04_RS09260;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000010.1 1 610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000010.1	RefSeq	region	1	610	.	+	.	ID=NZ_PYKF01000010.1:1..610;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000010.1	RefSeq	gene	29	610	.	-	.	ID=gene-C9F04_RS00090;Name=dmsB;end_range=610,.;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F04_RS00090;old_locus_tag=C9F04_00105;partial=true
NZ_PYKF01000010.1	Protein Homology	CDS	29	610	.	-	0	ID=cds-WP_080085159.1;Parent=gene-C9F04_RS00090;Dbxref=Genbank:WP_080085159.1;Name=WP_080085159.1;end_range=610,.;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460457.1;locus_tag=C9F04_RS00090;partial=true;product=dimethylsulfoxide reductase subunit B;protein_id=WP_080085159.1;transl_table=11
##sequence-region NZ_PYKF01000435.1 1 597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000435.1	RefSeq	region	1	597	.	+	.	ID=NZ_PYKF01000435.1:1..597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000435.1	RefSeq	pseudogene	1	597	.	-	.	ID=gene-C9F04_RS13085;Name=C9F04_RS13085;end_range=597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13085;old_locus_tag=C9F04_13515;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000435.1	Protein Homology	CDS	1	597	.	-	0	ID=cds-C9F04_RS13085;Parent=gene-C9F04_RS13085;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=597,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9F04_RS13085;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000522.1 1 14382
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000522.1	RefSeq	region	1	14382	.	+	.	ID=NZ_PYKF01000522.1:1..14382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000522.1	RefSeq	pseudogene	1	489	.	+	.	ID=gene-C9F04_RS15660;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=pseudogene;locus_tag=C9F04_RS15660;old_locus_tag=C9F04_16145;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000522.1	Protein Homology	CDS	1	489	.	+	0	ID=cds-C9F04_RS15660;Parent=gene-C9F04_RS15660;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707906.1;locus_tag=C9F04_RS15660;partial=true;product=putrescine/proton symporter PlaP;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	625	2055	.	-	.	ID=gene-C9F04_RS15665;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9F04_RS15665;old_locus_tag=C9F04_16150
NZ_PYKF01000522.1	Protein Homology	CDS	625	2055	.	-	0	ID=cds-WP_000216699.1;Parent=gene-C9F04_RS15665;Dbxref=Genbank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9F04_RS15665;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	pseudogene	2215	2292	.	+	.	ID=gene-C9F04_RS27110;Name=C9F04_RS27110;end_range=2292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27110;partial=true;pseudo=true
NZ_PYKF01000522.1	Protein Homology	CDS	2215	2292	.	+	0	ID=cds-C9F04_RS27110;Parent=gene-C9F04_RS27110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9F04_RS27110;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	2422	4770	.	-	.	ID=gene-C9F04_RS15670;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9F04_RS15670;old_locus_tag=C9F04_16155
NZ_PYKF01000522.1	Protein Homology	CDS	2422	4770	.	-	0	ID=cds-WP_135369388.1;Parent=gene-C9F04_RS15670;Dbxref=Genbank:WP_135369388.1;Name=WP_135369388.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F04_RS15670;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_135369388.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	pseudogene	5037	5129	.	+	.	ID=gene-C9F04_RS15675;Name=C9F04_RS15675;end_range=5129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15675;old_locus_tag=C9F04_16165;partial=true;pseudo=true;start_range=.,5037
NZ_PYKF01000522.1	Protein Homology	CDS	5037	5129	.	+	0	ID=cds-C9F04_RS15675;Parent=gene-C9F04_RS15675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9F04_RS15675;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,5037;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	5389	7665	.	+	.	ID=gene-C9F04_RS15680;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9F04_RS15680;old_locus_tag=C9F04_16170
NZ_PYKF01000522.1	Protein Homology	CDS	5389	7665	.	+	0	ID=cds-WP_146712848.1;Parent=gene-C9F04_RS15680;Dbxref=Genbank:WP_146712848.1;Name=WP_146712848.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9F04_RS15680;product=thiosulfate reductase PhsA;protein_id=WP_146712848.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	7680	8258	.	+	.	ID=gene-C9F04_RS15685;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9F04_RS15685;old_locus_tag=C9F04_16175
NZ_PYKF01000522.1	Protein Homology	CDS	7680	8258	.	+	0	ID=cds-WP_001016236.1;Parent=gene-C9F04_RS15685;Dbxref=Genbank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9F04_RS15685;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	8255	9019	.	+	.	ID=gene-C9F04_RS15690;Name=C9F04_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15690;old_locus_tag=C9F04_16180
NZ_PYKF01000522.1	Protein Homology	CDS	8255	9019	.	+	0	ID=cds-WP_001092553.1;Parent=gene-C9F04_RS15690;Dbxref=Genbank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9F04_RS15690;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	9143	10315	.	+	.	ID=gene-C9F04_RS15695;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9F04_RS15695;old_locus_tag=C9F04_16185
NZ_PYKF01000522.1	Protein Homology	CDS	9143	10315	.	+	0	ID=cds-WP_146712849.1;Parent=gene-C9F04_RS15695;Dbxref=Genbank:WP_146712849.1;Name=WP_146712849.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9F04_RS15695;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_146712849.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	10466	10933	.	+	.	ID=gene-C9F04_RS15700;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9F04_RS15700;old_locus_tag=C9F04_16190
NZ_PYKF01000522.1	Protein Homology	CDS	10466	10933	.	+	0	ID=cds-WP_000384326.1;Parent=gene-C9F04_RS15700;Dbxref=Genbank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9F04_RS15700;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	11052	12110	.	+	.	ID=gene-C9F04_RS15705;Name=C9F04_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15705;old_locus_tag=C9F04_16195
NZ_PYKF01000522.1	Protein Homology	CDS	11052	12110	.	+	0	ID=cds-WP_146712850.1;Parent=gene-C9F04_RS15705;Dbxref=Genbank:WP_146712850.1;Name=WP_146712850.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9F04_RS15705;product=FUSC family protein;protein_id=WP_146712850.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	12355	12690	.	+	.	ID=gene-C9F04_RS15710;Name=C9F04_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15710;old_locus_tag=C9F04_16200
NZ_PYKF01000522.1	Protein Homology	CDS	12355	12690	.	+	0	ID=cds-WP_000450405.1;Parent=gene-C9F04_RS15710;Dbxref=Genbank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9F04_RS15710;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	gene	12724	13590	.	-	.	ID=gene-C9F04_RS15715;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9F04_RS15715;old_locus_tag=C9F04_16205
NZ_PYKF01000522.1	Protein Homology	CDS	12724	13590	.	-	0	ID=cds-WP_001808089.1;Parent=gene-C9F04_RS15715;Dbxref=Genbank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9F04_RS15715;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11
NZ_PYKF01000522.1	RefSeq	pseudogene	13684	14382	.	-	.	ID=gene-C9F04_RS15720;Name=pduW;end_range=14382,.;gbkey=Gene;gene=pduW;gene_biotype=pseudogene;locus_tag=C9F04_RS15720;old_locus_tag=C9F04_16210;partial=true;pseudo=true
NZ_PYKF01000522.1	Protein Homology	CDS	13684	14382	.	-	0	ID=cds-C9F04_RS15720;Parent=gene-C9F04_RS15720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14382,.;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F04_RS15720;partial=true;product=propanediol utilization propionate kinase PduW;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000100.1 1 578
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000100.1	RefSeq	region	1	578	.	+	.	ID=NZ_PYKF01000100.1:1..578;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000100.1	RefSeq	pseudogene	1	578	.	-	.	ID=gene-C9F04_RS01910;Name=C9F04_RS01910;end_range=578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01910;old_locus_tag=C9F04_01995;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000100.1	Protein Homology	CDS	1	578	.	-	1	ID=cds-C9F04_RS01910;Parent=gene-C9F04_RS01910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F04_RS01910;partial=true;product=malto-oligosyltrehalose synthase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000830.1 1 577
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000830.1	RefSeq	region	1	577	.	+	.	ID=NZ_PYKF01000830.1:1..577;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000830.1	RefSeq	pseudogene	1	410	.	+	.	ID=gene-C9F04_RS26025;Name=C9F04_RS26025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26025;old_locus_tag=C9F04_26930;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000830.1	Protein Homology	CDS	1	410	.	+	2	ID=cds-C9F04_RS26025;Parent=gene-C9F04_RS26025;Note=confers macrolide resistance via active drug efflux%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9F04_RS26025;partial=true;product=macrolide transporter subunit MacA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000830.1	RefSeq	gene	407	577	.	+	.	ID=gene-C9F04_RS27295;Name=C9F04_RS27295;end_range=577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27295;partial=true
NZ_PYKF01000830.1	Protein Homology	CDS	407	577	.	+	0	ID=cds-WP_186799105.1;Parent=gene-C9F04_RS27295;Dbxref=Genbank:WP_186799105.1;Name=WP_186799105.1;end_range=577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125879.1;locus_tag=C9F04_RS27295;partial=true;product=hypothetical protein;protein_id=WP_186799105.1;transl_table=11
##sequence-region NZ_PYKF01000201.1 1 575
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000201.1	RefSeq	region	1	575	.	+	.	ID=NZ_PYKF01000201.1:1..575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000201.1	RefSeq	pseudogene	1	575	.	-	.	ID=gene-C9F04_RS04795;Name=C9F04_RS04795;end_range=575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04795;old_locus_tag=C9F04_04955;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000201.1	Protein Homology	CDS	1	575	.	-	2	ID=cds-C9F04_RS04795;Parent=gene-C9F04_RS04795;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=C9F04_RS04795;partial=true;product=transketolase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000703.1 1 568
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000703.1	RefSeq	region	1	568	.	+	.	ID=NZ_PYKF01000703.1:1..568;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000703.1	RefSeq	pseudogene	1	568	.	-	.	ID=gene-C9F04_RS21855;Name=C9F04_RS21855;end_range=568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21855;old_locus_tag=C9F04_22585;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000703.1	Protein Homology	CDS	1	568	.	-	2	ID=cds-C9F04_RS21855;Parent=gene-C9F04_RS21855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F04_RS21855;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000238.1 1 560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000238.1	RefSeq	region	1	560	.	+	.	ID=NZ_PYKF01000238.1:1..560;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000238.1	RefSeq	gene	1	93	.	-	.	ID=gene-C9F04_RS06380;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9F04_RS06380;old_locus_tag=C9F04_06580;partial=true;start_range=.,1
NZ_PYKF01000238.1	Protein Homology	CDS	1	93	.	-	0	ID=cds-WP_246759719.1;Parent=gene-C9F04_RS06380;Dbxref=Genbank:WP_246759719.1;Name=WP_246759719.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9F04_RS06380;partial=true;product=exopolysaccharide production protein YjbE;protein_id=WP_246759719.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000001.1 1 556
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000001.1	RefSeq	region	1	556	.	+	.	ID=NZ_PYKF01000001.1:1..556;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000001.1	RefSeq	gene	1	556	.	-	.	ID=gene-C9F04_RS00005;Name=C9F04_RS00005;end_range=556,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS00005;old_locus_tag=C9F04_00005;partial=true;start_range=.,1
NZ_PYKF01000001.1	cmsearch	rRNA	1	556	.	-	.	ID=rna-C9F04_RS00005;Parent=gene-C9F04_RS00005;Dbxref=RFAM:RF02541;end_range=556,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKF01000001.1	cmsearch	exon	1	556	.	-	.	ID=exon-C9F04_RS00005-1;Parent=rna-C9F04_RS00005;Dbxref=RFAM:RF02541;end_range=556,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKF01000112.1 1 546
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000112.1	RefSeq	region	1	546	.	+	.	ID=NZ_PYKF01000112.1:1..546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000112.1	RefSeq	gene	1	546	.	+	.	ID=gene-C9F04_RS02190;Name=thrC;end_range=546,.;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9F04_RS02190;old_locus_tag=C9F04_02270;partial=true;start_range=.,1
NZ_PYKF01000112.1	Protein Homology	CDS	1	546	.	+	2	ID=cds-WP_146712229.1;Parent=gene-C9F04_RS02190;Dbxref=Genbank:WP_146712229.1;Name=WP_146712229.1;Ontology_term=GO:0009088,GO:0004795;end_range=546,.;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F04_RS02190;partial=true;product=threonine synthase;protein_id=WP_146712229.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000022.1 1 527
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000022.1	RefSeq	region	1	527	.	+	.	ID=NZ_PYKF01000022.1:1..527;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000022.1	RefSeq	gene	138	213	.	-	.	ID=gene-C9F04_RS00300;Name=C9F04_RS00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS00300;old_locus_tag=C9F04_00325
NZ_PYKF01000022.1	tRNAscan-SE	tRNA	138	213	.	-	.	ID=rna-C9F04_RS00300;Parent=gene-C9F04_RS00300;anticodon=(pos:complement(178..180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00300;product=tRNA-Ala
NZ_PYKF01000022.1	tRNAscan-SE	exon	138	213	.	-	.	ID=exon-C9F04_RS00300-1;Parent=rna-C9F04_RS00300;anticodon=(pos:complement(178..180));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00300;product=tRNA-Ala
NZ_PYKF01000022.1	RefSeq	gene	325	401	.	-	.	ID=gene-C9F04_RS00305;Name=C9F04_RS00305;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS00305;old_locus_tag=C9F04_00330
NZ_PYKF01000022.1	tRNAscan-SE	tRNA	325	401	.	-	.	ID=rna-C9F04_RS00305;Parent=gene-C9F04_RS00305;anticodon=(pos:complement(365..367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00305;product=tRNA-Ile
NZ_PYKF01000022.1	tRNAscan-SE	exon	325	401	.	-	.	ID=exon-C9F04_RS00305-1;Parent=rna-C9F04_RS00305;anticodon=(pos:complement(365..367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00305;product=tRNA-Ile
NZ_PYKF01000022.1	RefSeq	gene	471	527	.	-	.	ID=gene-C9F04_RS00310;Name=C9F04_RS00310;end_range=527,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS00310;old_locus_tag=C9F04_00335;partial=true
NZ_PYKF01000022.1	cmsearch	rRNA	471	527	.	-	.	ID=rna-C9F04_RS00310;Parent=gene-C9F04_RS00310;Dbxref=RFAM:RF00177;end_range=527,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00310;partial=true;product=16S ribosomal RNA
NZ_PYKF01000022.1	cmsearch	exon	471	527	.	-	.	ID=exon-C9F04_RS00310-1;Parent=rna-C9F04_RS00310;Dbxref=RFAM:RF00177;end_range=527,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS00310;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PYKF01000102.1 1 515
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000102.1	RefSeq	region	1	515	.	+	.	ID=NZ_PYKF01000102.1:1..515;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000102.1	RefSeq	pseudogene	48	515	.	+	.	ID=gene-C9F04_RS01925;Name=C9F04_RS01925;end_range=515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01925;old_locus_tag=C9F04_02010;partial=true;pseudo=true
NZ_PYKF01000102.1	Protein Homology	CDS	48	515	.	+	0	ID=cds-C9F04_RS01925;Parent=gene-C9F04_RS01925;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9F04_RS01925;partial=true;product=tRNA 2-selenouridine(34) synthase MnmH;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000402.1 1 14318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000402.1	RefSeq	region	1	14318	.	+	.	ID=NZ_PYKF01000402.1:1..14318;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000402.1	RefSeq	pseudogene	91	276	.	-	.	ID=gene-C9F04_RS11925;Name=C9F04_RS11925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11925;old_locus_tag=C9F04_12335;partial=true;pseudo=true;start_range=.,91
NZ_PYKF01000402.1	Protein Homology	CDS	91	276	.	-	0	ID=cds-C9F04_RS11925;Parent=gene-C9F04_RS11925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9F04_RS11925;partial=true;product=phosphatase;pseudo=true;start_range=.,91;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	269	763	.	-	.	ID=gene-C9F04_RS11930;Name=C9F04_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11930;old_locus_tag=C9F04_12340
NZ_PYKF01000402.1	Protein Homology	CDS	269	763	.	-	0	ID=cds-WP_000426135.1;Parent=gene-C9F04_RS11930;Dbxref=Genbank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9F04_RS11930;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	846	1301	.	-	.	ID=gene-C9F04_RS11935;Name=C9F04_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11935;old_locus_tag=C9F04_12345
NZ_PYKF01000402.1	Protein Homology	CDS	846	1301	.	-	0	ID=cds-WP_000106617.1;Parent=gene-C9F04_RS11935;Dbxref=Genbank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9F04_RS11935;product=DUF412 domain-containing protein;protein_id=WP_000106617.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	1641	2843	.	+	.	ID=gene-C9F04_RS11940;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9F04_RS11940;old_locus_tag=C9F04_12350
NZ_PYKF01000402.1	Protein Homology	CDS	1641	2843	.	+	0	ID=cds-WP_000095689.1;Parent=gene-C9F04_RS11940;Dbxref=Genbank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9F04_RS11940;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	2920	5064	.	+	.	ID=gene-C9F04_RS11945;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9F04_RS11945;old_locus_tag=C9F04_12355
NZ_PYKF01000402.1	Protein Homology	CDS	2920	5064	.	+	0	ID=cds-WP_146712676.1;Parent=gene-C9F04_RS11945;Dbxref=Genbank:WP_146712676.1;Name=WP_146712676.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9F04_RS11945;product=phosphate acetyltransferase;protein_id=WP_146712676.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	5282	6802	.	+	.	ID=gene-C9F04_RS11950;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9F04_RS11950;old_locus_tag=C9F04_12360
NZ_PYKF01000402.1	Protein Homology	CDS	5282	6802	.	+	0	ID=cds-WP_146712677.1;Parent=gene-C9F04_RS11950;Dbxref=Genbank:WP_146712677.1;Name=WP_146712677.1;Ontology_term=GO:0016021;gbkey=CDS;gene=yfcC;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9F04_RS11950;product=putative basic amino acid antiporter YfcC;protein_id=WP_146712677.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	6851	7804	.	-	.	ID=gene-C9F04_RS11955;Name=C9F04_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11955;old_locus_tag=C9F04_12365
NZ_PYKF01000402.1	Protein Homology	CDS	6851	7804	.	-	0	ID=cds-WP_000593018.1;Parent=gene-C9F04_RS11955;Dbxref=Genbank:WP_000593018.1;Name=WP_000593018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9F04_RS11955;product=transketolase family protein;protein_id=WP_000593018.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	7797	8627	.	-	.	ID=gene-C9F04_RS11960;Name=C9F04_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11960;old_locus_tag=C9F04_12370
NZ_PYKF01000402.1	Protein Homology	CDS	7797	8627	.	-	0	ID=cds-WP_001103265.1;Parent=gene-C9F04_RS11960;Dbxref=Genbank:WP_001103265.1;Name=WP_001103265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9F04_RS11960;product=transketolase;protein_id=WP_001103265.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	8624	10015	.	-	.	ID=gene-C9F04_RS11965;Name=C9F04_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11965;old_locus_tag=C9F04_12375
NZ_PYKF01000402.1	Protein Homology	CDS	8624	10015	.	-	0	ID=cds-WP_001518515.1;Parent=gene-C9F04_RS11965;Dbxref=Genbank:WP_001518515.1;Name=WP_001518515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9F04_RS11965;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001518515.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	10036	10308	.	-	.	ID=gene-C9F04_RS11970;Name=C9F04_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11970;old_locus_tag=C9F04_12380
NZ_PYKF01000402.1	Protein Homology	CDS	10036	10308	.	-	0	ID=cds-WP_000699818.1;Parent=gene-C9F04_RS11970;Dbxref=Genbank:WP_000699818.1;Name=WP_000699818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9F04_RS11970;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	10389	10832	.	-	.	ID=gene-C9F04_RS11975;Name=C9F04_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11975;old_locus_tag=C9F04_12385
NZ_PYKF01000402.1	Protein Homology	CDS	10389	10832	.	-	0	ID=cds-WP_146712678.1;Parent=gene-C9F04_RS11975;Dbxref=Genbank:WP_146712678.1;Name=WP_146712678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9F04_RS11975;product=PTS sugar transporter subunit IIA;protein_id=WP_146712678.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	11085	12104	.	+	.	ID=gene-C9F04_RS11980;Name=C9F04_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11980;old_locus_tag=C9F04_12395
NZ_PYKF01000402.1	Protein Homology	CDS	11085	12104	.	+	0	ID=cds-WP_000026949.1;Parent=gene-C9F04_RS11980;Dbxref=Genbank:WP_000026949.1;Name=WP_000026949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9F04_RS11980;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	12110	12664	.	-	.	ID=gene-C9F04_RS11985;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9F04_RS11985;old_locus_tag=C9F04_12400
NZ_PYKF01000402.1	Protein Homology	CDS	12110	12664	.	-	0	ID=cds-WP_000230215.1;Parent=gene-C9F04_RS11985;Dbxref=Genbank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9F04_RS11985;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	12721	13272	.	-	.	ID=gene-C9F04_RS11990;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9F04_RS11990;old_locus_tag=C9F04_12405
NZ_PYKF01000402.1	Protein Homology	CDS	12721	13272	.	-	0	ID=cds-WP_000772458.1;Parent=gene-C9F04_RS11990;Dbxref=Genbank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9F04_RS11990;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	gene	13328	13972	.	-	.	ID=gene-C9F04_RS11995;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9F04_RS11995;old_locus_tag=C9F04_12410
NZ_PYKF01000402.1	Protein Homology	CDS	13328	13972	.	-	0	ID=cds-WP_000043012.1;Parent=gene-C9F04_RS11995;Dbxref=Genbank:WP_000043012.1;Name=WP_000043012.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9F04_RS11995;product=glutathione transferase;protein_id=WP_000043012.1;transl_table=11
NZ_PYKF01000402.1	RefSeq	pseudogene	14115	14318	.	+	.	ID=gene-C9F04_RS12000;Name=C9F04_RS12000;end_range=14318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12000;old_locus_tag=C9F04_12415;partial=true;pseudo=true
NZ_PYKF01000402.1	Protein Homology	CDS	14115	14318	.	+	0	ID=cds-C9F04_RS12000;Parent=gene-C9F04_RS12000;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9F04_RS12000;partial=true;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000809.1 1 512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000809.1	RefSeq	region	1	512	.	+	.	ID=NZ_PYKF01000809.1:1..512;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000809.1	RefSeq	gene	1	512	.	+	.	ID=gene-C9F04_RS25340;Name=C9F04_RS25340;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25340;old_locus_tag=C9F04_26205;partial=true;start_range=.,1
NZ_PYKF01000809.1	Protein Homology	CDS	1	512	.	+	0	ID=cds-WP_186799100.1;Parent=gene-C9F04_RS25340;Dbxref=Genbank:WP_186799100.1;Name=WP_186799100.1;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F04_RS25340;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_186799100.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000835.1 1 512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000835.1	RefSeq	region	1	512	.	+	.	ID=NZ_PYKF01000835.1:1..512;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000835.1	RefSeq	pseudogene	1	512	.	-	.	ID=gene-C9F04_RS26285;Name=pgtB;end_range=512,.;gbkey=Gene;gene=pgtB;gene_biotype=pseudogene;locus_tag=C9F04_RS26285;old_locus_tag=C9F04_27200;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000835.1	Protein Homology	CDS	1	512	.	-	2	ID=cds-C9F04_RS26285;Parent=gene-C9F04_RS26285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=512,.;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9F04_RS26285;partial=true;product=two-component system sensor histidine kinase PgtB;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000415.1 1 512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000415.1	RefSeq	region	1	512	.	+	.	ID=NZ_PYKF01000415.1:1..512;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000415.1	RefSeq	pseudogene	1	512	.	-	.	ID=gene-C9F04_RS12365;Name=narZ;end_range=512,.;gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=C9F04_RS12365;old_locus_tag=C9F04_12780;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000415.1	Protein Homology	CDS	1	512	.	-	1	ID=cds-C9F04_RS12365;Parent=gene-C9F04_RS12365;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=512,.;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F04_RS12365;partial=true;product=nitrate reductase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000307.1 1 505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000307.1	RefSeq	region	1	505	.	+	.	ID=NZ_PYKF01000307.1:1..505;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000307.1	RefSeq	gene	1	282	.	+	.	ID=gene-C9F04_RS09055;Name=C9F04_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09055;old_locus_tag=C9F04_09355;partial=true;start_range=.,1
NZ_PYKF01000307.1	Protein Homology	CDS	1	282	.	+	0	ID=cds-WP_146712524.1;Parent=gene-C9F04_RS09055;Dbxref=Genbank:WP_146712524.1;Name=WP_146712524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9F04_RS09055;partial=true;product=(2Fe-2S)-binding protein;protein_id=WP_146712524.1;start_range=.,1;transl_table=11
NZ_PYKF01000307.1	RefSeq	pseudogene	279	505	.	-	.	ID=gene-C9F04_RS09060;Name=zapC;end_range=505,.;gbkey=Gene;gene=zapC;gene_biotype=pseudogene;locus_tag=C9F04_RS09060;old_locus_tag=C9F04_09360;partial=true;pseudo=true
NZ_PYKF01000307.1	Protein Homology	CDS	279	505	.	-	2	ID=cds-C9F04_RS09060;Parent=gene-C9F04_RS09060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=505,.;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9F04_RS09060;partial=true;product=cell division protein ZapC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000795.1 1 505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000795.1	RefSeq	region	1	505	.	+	.	ID=NZ_PYKF01000795.1:1..505;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000795.1	RefSeq	gene	1	505	.	-	.	ID=gene-C9F04_RS24790;Name=C9F04_RS24790;end_range=505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24790;old_locus_tag=C9F04_25640;partial=true;start_range=.,1
NZ_PYKF01000795.1	Protein Homology	CDS	1	505	.	-	1	ID=cds-WP_146713322.1;Parent=gene-C9F04_RS24790;Dbxref=Genbank:WP_146713322.1;Name=WP_146713322.1;Ontology_term=GO:0005524;end_range=505,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F04_RS24790;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146713322.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000065.1 1 504
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000065.1	RefSeq	region	1	504	.	+	.	ID=NZ_PYKF01000065.1:1..504;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000065.1	RefSeq	pseudogene	1	504	.	+	.	ID=gene-C9F04_RS01210;Name=C9F04_RS01210;end_range=504,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01210;old_locus_tag=C9F04_01280;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000065.1	Protein Homology	CDS	1	504	.	+	2	ID=cds-C9F04_RS01210;Parent=gene-C9F04_RS01210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927422.1;locus_tag=C9F04_RS01210;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000436.1 1 497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000436.1	RefSeq	region	1	497	.	+	.	ID=NZ_PYKF01000436.1:1..497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000436.1	RefSeq	pseudogene	1	439	.	-	.	ID=gene-C9F04_RS13090;Name=prpE;end_range=439,.;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;gene_synonym=yahU;locus_tag=C9F04_RS13090;old_locus_tag=C9F04_13520;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000436.1	Protein Homology	CDS	1	439	.	-	0	ID=cds-C9F04_RS13090;Parent=gene-C9F04_RS13090;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=439,.;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=C9F04_RS13090;partial=true;product=propionyl-CoA synthetase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000539.1 1 497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000539.1	RefSeq	region	1	497	.	+	.	ID=NZ_PYKF01000539.1:1..497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000539.1	RefSeq	gene	1	497	.	-	.	ID=gene-C9F04_RS16110;Name=C9F04_RS16110;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16110;old_locus_tag=C9F04_16610;partial=true;start_range=.,1
NZ_PYKF01000539.1	Protein Homology	CDS	1	497	.	-	1	ID=cds-WP_186799041.1;Parent=gene-C9F04_RS16110;Dbxref=Genbank:WP_186799041.1;Name=WP_186799041.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=497,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707968.1;locus_tag=C9F04_RS16110;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_186799041.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000216.1 1 491
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000216.1	RefSeq	region	1	491	.	+	.	ID=NZ_PYKF01000216.1:1..491;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000216.1	RefSeq	pseudogene	59	491	.	-	.	ID=gene-C9F04_RS05365;Name=sgcC;end_range=491,.;gbkey=Gene;gene=sgcC;gene_biotype=pseudogene;locus_tag=C9F04_RS05365;old_locus_tag=C9F04_05540;partial=true;pseudo=true;start_range=.,59
NZ_PYKF01000216.1	Protein Homology	CDS	59	491	.	-	1	ID=cds-C9F04_RS05365;Parent=gene-C9F04_RS05365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=491,.;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F04_RS05365;partial=true;product=PTS sugar transporter subunit IIC SgcC;pseudo=true;start_range=.,59;transl_table=11
##sequence-region NZ_PYKF01000256.1 1 14244
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000256.1	RefSeq	region	1	14244	.	+	.	ID=NZ_PYKF01000256.1:1..14244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000256.1	RefSeq	gene	1	798	.	-	.	ID=gene-C9F04_RS07120;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9F04_RS07120;old_locus_tag=C9F04_07345;partial=true;start_range=.,1
NZ_PYKF01000256.1	Protein Homology	CDS	1	798	.	-	0	ID=cds-WP_146712454.1;Parent=gene-C9F04_RS07120;Dbxref=Genbank:WP_146712454.1;Name=WP_146712454.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231285.1;locus_tag=C9F04_RS07120;partial=true;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_146712454.1;start_range=.,1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	809	1921	.	-	.	ID=gene-C9F04_RS07125;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9F04_RS07125;old_locus_tag=C9F04_07350
NZ_PYKF01000256.1	Protein Homology	CDS	809	1921	.	-	0	ID=cds-WP_146712455.1;Parent=gene-C9F04_RS07125;Dbxref=Genbank:WP_146712455.1;Name=WP_146712455.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9F04_RS07125;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_146712455.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	1924	3825	.	-	.	ID=gene-C9F04_RS07130;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F04_RS07130;old_locus_tag=C9F04_07355
NZ_PYKF01000256.1	Protein Homology	CDS	1924	3825	.	-	0	ID=cds-WP_000828700.1;Parent=gene-C9F04_RS07130;Dbxref=Genbank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9F04_RS07130;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	pseudogene	3856	4323	.	-	.	ID=gene-C9F04_RS07135;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=pseudogene;locus_tag=C9F04_RS07135;old_locus_tag=C9F04_07360;pseudo=true
NZ_PYKF01000256.1	Protein Homology	CDS	3856	4323	.	-	0	ID=cds-C9F04_RS07135;Parent=gene-C9F04_RS07135;Note=internal stop;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9F04_RS07135;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	4327	4644	.	-	.	ID=gene-C9F04_RS07140;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9F04_RS07140;old_locus_tag=C9F04_07365
NZ_PYKF01000256.1	Protein Homology	CDS	4327	4644	.	-	0	ID=cds-WP_001161670.1;Parent=gene-C9F04_RS07140;Dbxref=Genbank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9F04_RS07140;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	4973	5581	.	-	.	ID=gene-C9F04_RS07145;Name=C9F04_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07145;old_locus_tag=C9F04_07370
NZ_PYKF01000256.1	Protein Homology	CDS	4973	5581	.	-	0	ID=cds-WP_135369789.1;Parent=gene-C9F04_RS07145;Dbxref=Genbank:WP_135369789.1;Name=WP_135369789.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9F04_RS07145;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_135369789.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	5678	6772	.	+	.	ID=gene-C9F04_RS07150;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9F04_RS07150;old_locus_tag=C9F04_07375
NZ_PYKF01000256.1	Protein Homology	CDS	5678	6772	.	+	0	ID=cds-WP_001173259.1;Parent=gene-C9F04_RS07150;Dbxref=Genbank:WP_001173259.1;Name=WP_001173259.1;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9F04_RS07150;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173259.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	6747	7388	.	-	.	ID=gene-C9F04_RS07155;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9F04_RS07155;old_locus_tag=C9F04_07380
NZ_PYKF01000256.1	Protein Homology	CDS	6747	7388	.	-	0	ID=cds-WP_001518902.1;Parent=gene-C9F04_RS07155;Dbxref=Genbank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9F04_RS07155;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	7390	8421	.	-	.	ID=gene-C9F04_RS07160;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9F04_RS07160;old_locus_tag=C9F04_07385
NZ_PYKF01000256.1	Protein Homology	CDS	7390	8421	.	-	0	ID=cds-WP_135369788.1;Parent=gene-C9F04_RS07160;Dbxref=Genbank:WP_135369788.1;Name=WP_135369788.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9F04_RS07160;product=DNA polymerase III subunit delta;protein_id=WP_135369788.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	8421	9011	.	-	.	ID=gene-C9F04_RS07165;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9F04_RS07165;old_locus_tag=C9F04_07390
NZ_PYKF01000256.1	Protein Homology	CDS	8421	9011	.	-	0	ID=cds-WP_080219684.1;Parent=gene-C9F04_RS07165;Dbxref=Genbank:WP_080219684.1;Name=WP_080219684.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9F04_RS07165;product=LPS assembly lipoprotein LptE;protein_id=WP_080219684.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	9026	11608	.	-	.	ID=gene-C9F04_RS07170;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F04_RS07170;old_locus_tag=C9F04_07395
NZ_PYKF01000256.1	Protein Homology	CDS	9026	11608	.	-	0	ID=cds-WP_001157916.1;Parent=gene-C9F04_RS07170;Dbxref=Genbank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9F04_RS07170;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	11845	12186	.	+	.	ID=gene-C9F04_RS07175;Name=C9F04_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07175;old_locus_tag=C9F04_07400
NZ_PYKF01000256.1	Protein Homology	CDS	11845	12186	.	+	0	ID=cds-WP_001574029.1;Parent=gene-C9F04_RS07175;Dbxref=Genbank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9F04_RS07175;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	12203	13375	.	+	.	ID=gene-C9F04_RS07180;Name=C9F04_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07180;old_locus_tag=C9F04_07405
NZ_PYKF01000256.1	Protein Homology	CDS	12203	13375	.	+	0	ID=cds-WP_001670689.1;Parent=gene-C9F04_RS07180;Dbxref=Genbank:WP_001670689.1;Name=WP_001670689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9F04_RS07180;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11
NZ_PYKF01000256.1	RefSeq	gene	13425	14244	.	+	.	ID=gene-C9F04_RS07185;Name=C9F04_RS07185;end_range=14244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07185;old_locus_tag=C9F04_07410;partial=true
NZ_PYKF01000256.1	Protein Homology	CDS	13425	14244	.	+	0	ID=cds-WP_146712456.1;Parent=gene-C9F04_RS07185;Dbxref=Genbank:WP_146712456.1;Name=WP_146712456.1;end_range=14244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954875.1;locus_tag=C9F04_RS07185;partial=true;product=2-keto-3-deoxygluconate permease;protein_id=WP_146712456.1;transl_table=11
##sequence-region NZ_PYKF01000050.1 1 488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000050.1	RefSeq	region	1	488	.	+	.	ID=NZ_PYKF01000050.1:1..488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000050.1	RefSeq	pseudogene	1	311	.	-	.	ID=gene-C9F04_RS00890;Name=C9F04_RS00890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00890;old_locus_tag=C9F04_00945;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000050.1	Protein Homology	CDS	1	311	.	-	0	ID=cds-C9F04_RS00890;Parent=gene-C9F04_RS00890;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9F04_RS00890;partial=true;product=PTS fructose transporter subunit EIIBC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000050.1	RefSeq	pseudogene	328	488	.	-	.	ID=gene-C9F04_RS00895;Name=fruK;end_range=488,.;gbkey=Gene;gene=fruK;gene_biotype=pseudogene;locus_tag=C9F04_RS00895;old_locus_tag=C9F04_00950;partial=true;pseudo=true
NZ_PYKF01000050.1	Protein Homology	CDS	328	488	.	-	2	ID=cds-C9F04_RS00895;Parent=gene-C9F04_RS00895;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=488,.;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=C9F04_RS00895;partial=true;product=1-phosphofructokinase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000480.1 1 484
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000480.1	RefSeq	region	1	484	.	+	.	ID=NZ_PYKF01000480.1:1..484;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000480.1	RefSeq	pseudogene	1	437	.	+	.	ID=gene-C9F04_RS14425;Name=C9F04_RS14425;end_range=437,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14425;old_locus_tag=C9F04_14895;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000480.1	Protein Homology	CDS	1	437	.	+	2	ID=cds-C9F04_RS14425;Parent=gene-C9F04_RS14425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008168;end_range=437,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F04_RS14425;partial=true;product=methyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000544.1 1 483
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000544.1	RefSeq	region	1	483	.	+	.	ID=NZ_PYKF01000544.1:1..483;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000544.1	RefSeq	gene	1	483	.	-	.	ID=gene-C9F04_RS16275;Name=C9F04_RS16275;end_range=483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16275;old_locus_tag=C9F04_16775;partial=true;start_range=.,1
NZ_PYKF01000544.1	Protein Homology	CDS	1	483	.	-	0	ID=cds-WP_186799042.1;Parent=gene-C9F04_RS16275;Dbxref=Genbank:WP_186799042.1;Name=WP_186799042.1;end_range=483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F04_RS16275;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_186799042.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000766.1 1 477
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000766.1	RefSeq	region	1	477	.	+	.	ID=NZ_PYKF01000766.1:1..477;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000766.1	RefSeq	pseudogene	63	477	.	+	.	ID=gene-C9F04_RS23840;Name=C9F04_RS23840;end_range=477,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23840;old_locus_tag=C9F04_24640;partial=true;pseudo=true;start_range=.,63
NZ_PYKF01000766.1	Protein Homology	CDS	63	477	.	+	0	ID=cds-C9F04_RS23840;Parent=gene-C9F04_RS23840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149762.1;locus_tag=C9F04_RS23840;partial=true;product=condensation domain-containing protein;pseudo=true;start_range=.,63;transl_table=11
##sequence-region NZ_PYKF01000135.1 1 468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000135.1	RefSeq	region	1	468	.	+	.	ID=NZ_PYKF01000135.1:1..468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000135.1	RefSeq	gene	1	191	.	-	.	ID=gene-C9F04_RS02755;Name=C9F04_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02755;old_locus_tag=C9F04_02855;partial=true;start_range=.,1
NZ_PYKF01000135.1	Protein Homology	CDS	1	191	.	-	0	ID=cds-WP_186798985.1;Parent=gene-C9F04_RS02755;Dbxref=Genbank:WP_186798985.1;Name=WP_186798985.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9F04_RS02755;partial=true;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_186798985.1;start_range=.,1;transl_table=11
NZ_PYKF01000135.1	RefSeq	gene	200	468	.	-	.	ID=gene-C9F04_RS02760;Name=C9F04_RS02760;end_range=468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02760;old_locus_tag=C9F04_02860;partial=true
NZ_PYKF01000135.1	Protein Homology	CDS	200	468	.	-	2	ID=cds-WP_186798986.1;Parent=gene-C9F04_RS02760;Dbxref=Genbank:WP_186798986.1;Name=WP_186798986.1;Ontology_term=GO:0003824;end_range=468,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9F04_RS02760;partial=true;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_186798986.1;transl_table=11
##sequence-region NZ_PYKF01000140.1 1 460
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000140.1	RefSeq	region	1	460	.	+	.	ID=NZ_PYKF01000140.1:1..460;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000140.1	RefSeq	gene	1	232	.	-	.	ID=gene-C9F04_RS02905;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9F04_RS02905;old_locus_tag=C9F04_03010;partial=true;start_range=.,1
NZ_PYKF01000140.1	Protein Homology	CDS	1	232	.	-	0	ID=cds-WP_146712270.1;Parent=gene-C9F04_RS02905;Dbxref=Genbank:WP_146712270.1;Name=WP_146712270.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9F04_RS02905;partial=true;product=VOC family metalloprotein YjdN;protein_id=WP_146712270.1;start_range=.,1;transl_table=11
NZ_PYKF01000140.1	RefSeq	gene	352	460	.	-	.	ID=gene-C9F04_RS02910;Name=C9F04_RS02910;end_range=460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02910;partial=true
NZ_PYKF01000140.1	Protein Homology	CDS	352	460	.	-	1	ID=cds-WP_186798989.1;Parent=gene-C9F04_RS02910;Dbxref=Genbank:WP_186798989.1;Name=WP_186798989.1;end_range=460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056484.1;locus_tag=C9F04_RS02910;partial=true;product=PhnA domain-containing protein;protein_id=WP_186798989.1;transl_table=11
##sequence-region NZ_PYKF01000268.1 1 457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000268.1	RefSeq	region	1	457	.	+	.	ID=NZ_PYKF01000268.1:1..457;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000268.1	RefSeq	pseudogene	1	381	.	+	.	ID=gene-C9F04_RS07460;Name=C9F04_RS07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07460;old_locus_tag=C9F04_07705;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000268.1	Protein Homology	CDS	1	381	.	+	0	ID=cds-C9F04_RS07460;Parent=gene-C9F04_RS07460;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F04_RS07460;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000257.1 1 443
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000257.1	RefSeq	region	1	443	.	+	.	ID=NZ_PYKF01000257.1:1..443;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000257.1	RefSeq	gene	1	443	.	+	.	ID=gene-C9F04_RS07190;Name=C9F04_RS07190;end_range=443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07190;old_locus_tag=C9F04_07415;partial=true;start_range=.,1
NZ_PYKF01000257.1	Protein Homology	CDS	1	443	.	+	0	ID=cds-WP_146712457.1;Parent=gene-C9F04_RS07190;Dbxref=Genbank:WP_146712457.1;Name=WP_146712457.1;Ontology_term=GO:0055085,GO:0016020;end_range=443,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461378.1;locus_tag=C9F04_RS07190;partial=true;product=ABC transporter permease subunit;protein_id=WP_146712457.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000054.1 1 439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000054.1	RefSeq	region	1	439	.	+	.	ID=NZ_PYKF01000054.1:1..439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000054.1	RefSeq	pseudogene	1	356	.	+	.	ID=gene-C9F04_RS00995;Name=C9F04_RS00995;end_range=356,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00995;old_locus_tag=C9F04_01055;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000054.1	Protein Homology	CDS	1	356	.	+	2	ID=cds-C9F04_RS00995;Parent=gene-C9F04_RS00995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9F04_RS00995;partial=true;product=ethanolamine ammonia-lyase reactivating factor EutA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000489.1 1 438
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000489.1	RefSeq	region	1	438	.	+	.	ID=NZ_PYKF01000489.1:1..438;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000489.1	RefSeq	gene	1	438	.	+	.	ID=gene-C9F04_RS14635;Name=C9F04_RS14635;end_range=438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14635;old_locus_tag=C9F04_15120;partial=true;start_range=.,1
NZ_PYKF01000489.1	Protein Homology	CDS	1	438	.	+	2	ID=cds-WP_146712803.1;Parent=gene-C9F04_RS14635;Dbxref=Genbank:WP_146712803.1;Name=WP_146712803.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;end_range=438,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706870.1;locus_tag=C9F04_RS14635;partial=true;product=MOSC domain-containing protein;protein_id=WP_146712803.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000240.1 1 14174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000240.1	RefSeq	region	1	14174	.	+	.	ID=NZ_PYKF01000240.1:1..14174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000240.1	RefSeq	gene	1	266	.	-	.	ID=gene-C9F04_RS06430;Name=C9F04_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06430;old_locus_tag=C9F04_06630;partial=true;start_range=.,1
NZ_PYKF01000240.1	Protein Homology	CDS	1	266	.	-	0	ID=cds-WP_146712425.1;Parent=gene-C9F04_RS06430;Dbxref=Genbank:WP_146712425.1;Name=WP_146712425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212737.1;locus_tag=C9F04_RS06430;partial=true;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_146712425.1;start_range=.,1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	734	2236	.	+	.	ID=gene-C9F04_RS06435;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9F04_RS06435;old_locus_tag=C9F04_06635
NZ_PYKF01000240.1	Protein Homology	CDS	734	2236	.	+	0	ID=cds-WP_000919710.1;Parent=gene-C9F04_RS06435;Dbxref=Genbank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=proP;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9F04_RS06435;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	2306	2395	.	+	.	ID=gene-C9F04_RS06440;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9F04_RS06440;old_locus_tag=C9F04_06640
NZ_PYKF01000240.1	Protein Homology	CDS	2306	2395	.	+	0	ID=cds-WP_000844399.1;Parent=gene-C9F04_RS06440;Dbxref=Genbank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9F04_RS06440;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	2403	3473	.	-	.	ID=gene-C9F04_RS06445;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9F04_RS06445;old_locus_tag=C9F04_06645
NZ_PYKF01000240.1	Protein Homology	CDS	2403	3473	.	-	0	ID=cds-WP_146712428.1;Parent=gene-C9F04_RS06445;Dbxref=Genbank:WP_146712428.1;Name=WP_146712428.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9F04_RS06445;product=two-component system sensor histidine kinase PmrB;protein_id=WP_146712428.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	3483	4151	.	-	.	ID=gene-C9F04_RS06450;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9F04_RS06450;old_locus_tag=C9F04_06650
NZ_PYKF01000240.1	Protein Homology	CDS	3483	4151	.	-	0	ID=cds-WP_000697899.1;Parent=gene-C9F04_RS06450;Dbxref=Genbank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9F04_RS06450;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	4148	5791	.	-	.	ID=gene-C9F04_RS06455;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9F04_RS06455;old_locus_tag=C9F04_06655
NZ_PYKF01000240.1	Protein Homology	CDS	4148	5791	.	-	0	ID=cds-WP_000919290.1;Parent=gene-C9F04_RS06455;Dbxref=Genbank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9F04_RS06455;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	5925	7262	.	-	.	ID=gene-C9F04_RS06460;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9F04_RS06460;old_locus_tag=C9F04_06660
NZ_PYKF01000240.1	Protein Homology	CDS	5925	7262	.	-	0	ID=cds-WP_146712426.1;Parent=gene-C9F04_RS06460;Dbxref=Genbank:WP_146712426.1;Name=WP_146712426.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9F04_RS06460;product=arginine/agmatine antiporter;protein_id=WP_146712426.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	7402	8163	.	-	.	ID=gene-C9F04_RS06465;Name=C9F04_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06465;old_locus_tag=C9F04_06665
NZ_PYKF01000240.1	Protein Homology	CDS	7402	8163	.	-	0	ID=cds-WP_023259223.1;Parent=gene-C9F04_RS06465;Dbxref=Genbank:WP_023259223.1;Name=WP_023259223.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9F04_RS06465;product=AraC family transcriptional regulator;protein_id=WP_023259223.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	8460	10727	.	-	.	ID=gene-C9F04_RS06470;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9F04_RS06470;old_locus_tag=C9F04_06670
NZ_PYKF01000240.1	Protein Homology	CDS	8460	10727	.	-	0	ID=cds-WP_146712429.1;Parent=gene-C9F04_RS06470;Dbxref=Genbank:WP_146712429.1;Name=WP_146712429.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9F04_RS06470;product=arginine decarboxylase;protein_id=WP_146712429.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	10960	11892	.	-	.	ID=gene-C9F04_RS06475;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9F04_RS06475;old_locus_tag=C9F04_06675
NZ_PYKF01000240.1	Protein Homology	CDS	10960	11892	.	-	0	ID=cds-WP_146712427.1;Parent=gene-C9F04_RS06475;Dbxref=Genbank:WP_146712427.1;Name=WP_146712427.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9F04_RS06475;product=transcriptional regulator MelR;protein_id=WP_146712427.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	12161	13516	.	+	.	ID=gene-C9F04_RS06480;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9F04_RS06480;old_locus_tag=C9F04_06680
NZ_PYKF01000240.1	Protein Homology	CDS	12161	13516	.	+	0	ID=cds-WP_020437593.1;Parent=gene-C9F04_RS06480;Dbxref=Genbank:WP_020437593.1;Name=WP_020437593.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9F04_RS06480;product=alpha-galactosidase;protein_id=WP_020437593.1;transl_table=11
NZ_PYKF01000240.1	RefSeq	gene	13600	14174	.	+	.	ID=gene-C9F04_RS06485;Name=C9F04_RS06485;end_range=14174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS06485;old_locus_tag=C9F04_06685;partial=true
NZ_PYKF01000240.1	Protein Homology	CDS	13600	14174	.	+	0	ID=cds-WP_186799006.1;Parent=gene-C9F04_RS06485;Dbxref=Genbank:WP_186799006.1;Name=WP_186799006.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016021;end_range=14174,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9F04_RS06485;partial=true;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_186799006.1;transl_table=11
##sequence-region NZ_PYKF01000621.1 1 434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000621.1	RefSeq	region	1	434	.	+	.	ID=NZ_PYKF01000621.1:1..434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000621.1	RefSeq	gene	1	434	.	+	.	ID=gene-C9F04_RS18775;Name=C9F04_RS18775;end_range=434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS18775;old_locus_tag=C9F04_19390;partial=true;start_range=.,1
NZ_PYKF01000621.1	Protein Homology	CDS	1	434	.	+	2	ID=cds-WP_146713011.1;Parent=gene-C9F04_RS18775;Dbxref=Genbank:WP_146713011.1;Name=WP_146713011.1;end_range=434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS18775;partial=true;product=biotin/lipoyl-binding protein;protein_id=WP_146713011.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000120.1 1 429
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000120.1	RefSeq	region	1	429	.	+	.	ID=NZ_PYKF01000120.1:1..429;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000120.1	RefSeq	pseudogene	20	253	.	+	.	ID=gene-C9F04_RS02290;Name=C9F04_RS02290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02290;old_locus_tag=C9F04_02370;partial=true;pseudo=true;start_range=.,20
NZ_PYKF01000120.1	Protein Homology	CDS	20	253	.	+	0	ID=cds-C9F04_RS02290;Parent=gene-C9F04_RS02290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9F04_RS02290;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,20;transl_table=11
##sequence-region NZ_PYKF01000147.1 1 428
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000147.1	RefSeq	region	1	428	.	+	.	ID=NZ_PYKF01000147.1:1..428;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000147.1	RefSeq	gene	1	428	.	+	.	ID=gene-C9F04_RS03105;Name=C9F04_RS03105;end_range=428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03105;old_locus_tag=C9F04_03205;partial=true;start_range=.,1
NZ_PYKF01000147.1	Protein Homology	CDS	1	428	.	+	2	ID=cds-WP_146712278.1;Parent=gene-C9F04_RS03105;Dbxref=Genbank:WP_146712278.1;Name=WP_146712278.1;end_range=428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS03105;partial=true;product=biotin/lipoyl-binding protein;protein_id=WP_146712278.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000380.1 1 413
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000380.1	RefSeq	region	1	413	.	+	.	ID=NZ_PYKF01000380.1:1..413;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000380.1	RefSeq	pseudogene	62	413	.	-	.	ID=gene-C9F04_RS11180;Name=asrC;end_range=413,.;gbkey=Gene;gene=asrC;gene_biotype=pseudogene;locus_tag=C9F04_RS11180;old_locus_tag=C9F04_11540;partial=true;pseudo=true;start_range=.,62
NZ_PYKF01000380.1	Protein Homology	CDS	62	413	.	-	1	ID=cds-C9F04_RS11180;Parent=gene-C9F04_RS11180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=413,.;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9F04_RS11180;partial=true;product=anaerobic sulfite reductase subunit AsrC;pseudo=true;start_range=.,62;transl_table=11
##sequence-region NZ_PYKF01000517.1 1 409
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000517.1	RefSeq	region	1	409	.	+	.	ID=NZ_PYKF01000517.1:1..409;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000517.1	RefSeq	pseudogene	1	207	.	+	.	ID=gene-C9F04_RS15475;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=pseudogene;locus_tag=C9F04_RS15475;old_locus_tag=C9F04_15965;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000517.1	Protein Homology	CDS	1	207	.	+	0	ID=cds-C9F04_RS15475;Parent=gene-C9F04_RS15475;Note=thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108338.1;locus_tag=C9F04_RS15475;partial=true;product=gluconokinase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000517.1	RefSeq	pseudogene	204	409	.	+	.	ID=gene-C9F04_RS15480;Name=C9F04_RS15480;end_range=409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS15480;old_locus_tag=C9F04_15970;partial=true;pseudo=true
NZ_PYKF01000517.1	Protein Homology	CDS	204	409	.	+	0	ID=cds-C9F04_RS15480;Parent=gene-C9F04_RS15480;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9F04_RS15480;partial=true;product=gluconate transporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000798.1 1 405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000798.1	RefSeq	region	1	405	.	+	.	ID=NZ_PYKF01000798.1:1..405;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000798.1	RefSeq	pseudogene	1	405	.	+	.	ID=gene-C9F04_RS24825;Name=C9F04_RS24825;end_range=405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24825;old_locus_tag=C9F04_25675;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000798.1	Protein Homology	CDS	1	405	.	+	0	ID=cds-C9F04_RS24825;Parent=gene-C9F04_RS24825;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F04_RS24825;partial=true;product=formate dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000007.1 1 403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000007.1	RefSeq	region	1	403	.	+	.	ID=NZ_PYKF01000007.1:1..403;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000007.1	RefSeq	gene	1	274	.	+	.	ID=gene-C9F04_RS00070;Name=C9F04_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00070;old_locus_tag=C9F04_00085;partial=true;start_range=.,1
NZ_PYKF01000007.1	Protein Homology	CDS	1	274	.	+	1	ID=cds-WP_146712126.1;Parent=gene-C9F04_RS00070;Dbxref=Genbank:WP_146712126.1;Name=WP_146712126.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9F04_RS00070;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_146712126.1;start_range=.,1;transl_table=11
NZ_PYKF01000007.1	RefSeq	pseudogene	299	403	.	+	.	ID=gene-C9F04_RS00075;Name=C9F04_RS00075;end_range=403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00075;old_locus_tag=C9F04_00090;partial=true;pseudo=true
NZ_PYKF01000007.1	Protein Homology	CDS	299	403	.	+	0	ID=cds-C9F04_RS00075;Parent=gene-C9F04_RS00075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=C9F04_RS00075;partial=true;product=5-deoxy-glucuronate isomerase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000396.1 1 399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000396.1	RefSeq	region	1	399	.	+	.	ID=NZ_PYKF01000396.1:1..399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000396.1	RefSeq	gene	1	399	.	+	.	ID=gene-C9F04_RS11675;Name=C9F04_RS11675;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11675;old_locus_tag=C9F04_12080;partial=true;start_range=.,1
NZ_PYKF01000396.1	Protein Homology	CDS	1	399	.	+	0	ID=cds-WP_186799021.1;Parent=gene-C9F04_RS11675;Dbxref=Genbank:WP_186799021.1;Name=WP_186799021.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=399,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686030.1;locus_tag=C9F04_RS11675;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_186799021.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000243.1 1 399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000243.1	RefSeq	region	1	399	.	+	.	ID=NZ_PYKF01000243.1:1..399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000243.1	RefSeq	pseudogene	1	182	.	+	.	ID=gene-C9F04_RS06550;Name=C9F04_RS06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06550;old_locus_tag=C9F04_06760;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000243.1	Protein Homology	CDS	1	182	.	+	2	ID=cds-C9F04_RS06550;Parent=gene-C9F04_RS06550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706312.1;locus_tag=C9F04_RS06550;partial=true;product=transketolase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000243.1	RefSeq	pseudogene	182	334	.	+	.	ID=gene-C9F04_RS06555;Name=C9F04_RS06555;end_range=334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06555;old_locus_tag=C9F04_06765;partial=true;pseudo=true
NZ_PYKF01000243.1	Protein Homology	CDS	182	334	.	+	0	ID=cds-C9F04_RS06555;Parent=gene-C9F04_RS06555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225958.1;locus_tag=C9F04_RS06555;partial=true;product=transketolase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000106.1 1 394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000106.1	RefSeq	region	1	394	.	+	.	ID=NZ_PYKF01000106.1:1..394;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000106.1	RefSeq	pseudogene	80	394	.	+	.	ID=gene-C9F04_RS02035;Name=C9F04_RS02035;end_range=394,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02035;old_locus_tag=C9F04_02120;partial=true;pseudo=true;start_range=.,80
NZ_PYKF01000106.1	Protein Homology	CDS	80	394	.	+	0	ID=cds-C9F04_RS02035;Parent=gene-C9F04_RS02035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F04_RS02035;partial=true;product=quinone-dependent dihydroorotate dehydrogenase;pseudo=true;start_range=.,80;transl_table=11
##sequence-region NZ_PYKF01000177.1 1 14122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000177.1	RefSeq	region	1	14122	.	+	.	ID=NZ_PYKF01000177.1:1..14122;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000177.1	RefSeq	gene	1	546	.	+	.	ID=gene-C9F04_RS04030;Name=C9F04_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04030;old_locus_tag=C9F04_04170;partial=true;start_range=.,1
NZ_PYKF01000177.1	Protein Homology	CDS	1	546	.	+	0	ID=cds-WP_261770743.1;Parent=gene-C9F04_RS04030;Dbxref=Genbank:WP_261770743.1;Name=WP_261770743.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9F04_RS04030;partial=true;product=cytosine permease;protein_id=WP_261770743.1;start_range=.,1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	533	1813	.	+	.	ID=gene-C9F04_RS04035;Name=C9F04_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04035;old_locus_tag=C9F04_04175
NZ_PYKF01000177.1	Protein Homology	CDS	533	1813	.	+	0	ID=cds-WP_146712317.1;Parent=gene-C9F04_RS04035;Dbxref=Genbank:WP_146712317.1;Name=WP_146712317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9F04_RS04035;product=cytosine deaminase;protein_id=WP_146712317.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	1895	2362	.	-	.	ID=gene-C9F04_RS04040;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9F04_RS04040;old_locus_tag=C9F04_04180
NZ_PYKF01000177.1	Protein Homology	CDS	1895	2362	.	-	0	ID=cds-WP_000979900.1;Parent=gene-C9F04_RS04040;Dbxref=Genbank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9F04_RS04040;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	2359	3234	.	-	.	ID=gene-C9F04_RS04045;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9F04_RS04045;old_locus_tag=C9F04_04185
NZ_PYKF01000177.1	Protein Homology	CDS	2359	3234	.	-	0	ID=cds-WP_000208970.1;Parent=gene-C9F04_RS04045;Dbxref=Genbank:WP_000208970.1;Name=WP_000208970.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9F04_RS04045;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	3231	3920	.	-	.	ID=gene-C9F04_RS04050;Name=C9F04_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04050;old_locus_tag=C9F04_04190
NZ_PYKF01000177.1	Protein Homology	CDS	3231	3920	.	-	0	ID=cds-WP_094963812.1;Parent=gene-C9F04_RS04050;Dbxref=Genbank:WP_094963812.1;Name=WP_094963812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9F04_RS04050;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_094963812.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	3967	5457	.	-	.	ID=gene-C9F04_RS04055;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9F04_RS04055;old_locus_tag=C9F04_04195
NZ_PYKF01000177.1	Protein Homology	CDS	3967	5457	.	-	0	ID=cds-WP_000108071.1;Parent=gene-C9F04_RS04055;Dbxref=Genbank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9F04_RS04055;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	5573	6466	.	-	.	ID=gene-C9F04_RS04060;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9F04_RS04060;old_locus_tag=C9F04_04200
NZ_PYKF01000177.1	Protein Homology	CDS	5573	6466	.	-	0	ID=cds-WP_001029665.1;Parent=gene-C9F04_RS04060;Dbxref=Genbank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9F04_RS04060;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	6601	7392	.	-	.	ID=gene-C9F04_RS04065;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9F04_RS04065;old_locus_tag=C9F04_04205
NZ_PYKF01000177.1	Protein Homology	CDS	6601	7392	.	-	0	ID=cds-WP_000382926.1;Parent=gene-C9F04_RS04065;Dbxref=Genbank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9F04_RS04065;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	7501	8001	.	-	.	ID=gene-C9F04_RS04070;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9F04_RS04070;old_locus_tag=C9F04_04210
NZ_PYKF01000177.1	Protein Homology	CDS	7501	8001	.	-	0	ID=cds-WP_000366112.1;Parent=gene-C9F04_RS04070;Dbxref=Genbank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9F04_RS04070;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	8007	8645	.	-	.	ID=gene-C9F04_RS04075;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9F04_RS04075;old_locus_tag=C9F04_04215
NZ_PYKF01000177.1	Protein Homology	CDS	8007	8645	.	-	0	ID=cds-WP_135369548.1;Parent=gene-C9F04_RS04075;Dbxref=Genbank:WP_135369548.1;Name=WP_135369548.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9F04_RS04075;product=stringent starvation protein A;protein_id=WP_135369548.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	8958	9350	.	-	.	ID=gene-C9F04_RS04080;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9F04_RS04080;old_locus_tag=C9F04_04220
NZ_PYKF01000177.1	Protein Homology	CDS	8958	9350	.	-	0	ID=cds-WP_000829815.1;Parent=gene-C9F04_RS04080;Dbxref=Genbank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9F04_RS04080;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	9366	9794	.	-	.	ID=gene-C9F04_RS04085;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9F04_RS04085;old_locus_tag=C9F04_04225
NZ_PYKF01000177.1	Protein Homology	CDS	9366	9794	.	-	0	ID=cds-WP_000847559.1;Parent=gene-C9F04_RS04085;Dbxref=Genbank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9F04_RS04085;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	10095	11219	.	-	.	ID=gene-C9F04_RS04090;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9F04_RS04090;old_locus_tag=C9F04_04230
NZ_PYKF01000177.1	Protein Homology	CDS	10095	11219	.	-	0	ID=cds-WP_115408944.1;Parent=gene-C9F04_RS04090;Dbxref=Genbank:WP_115408944.1;Name=WP_115408944.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9F04_RS04090;product=cell division protein ZapE;protein_id=WP_115408944.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	11412	11810	.	+	.	ID=gene-C9F04_RS04095;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9F04_RS04095;old_locus_tag=C9F04_04235
NZ_PYKF01000177.1	Protein Homology	CDS	11412	11810	.	+	0	ID=cds-WP_001519074.1;Parent=gene-C9F04_RS04095;Dbxref=Genbank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9F04_RS04095;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	11967	13334	.	+	.	ID=gene-C9F04_RS04100;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9F04_RS04100;old_locus_tag=C9F04_04240
NZ_PYKF01000177.1	Protein Homology	CDS	11967	13334	.	+	0	ID=cds-WP_000716690.1;Parent=gene-C9F04_RS04100;Dbxref=Genbank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9F04_RS04100;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11
NZ_PYKF01000177.1	RefSeq	gene	13427	14122	.	+	.	ID=gene-C9F04_RS04105;Name=C9F04_RS04105;end_range=14122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04105;old_locus_tag=C9F04_04245;partial=true
NZ_PYKF01000177.1	Protein Homology	CDS	13427	14122	.	+	0	ID=cds-WP_146712318.1;Parent=gene-C9F04_RS04105;Dbxref=Genbank:WP_146712318.1;Name=WP_146712318.1;end_range=14122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9F04_RS04105;partial=true;product=trypsin-like peptidase domain-containing protein;protein_id=WP_146712318.1;transl_table=11
##sequence-region NZ_PYKF01000744.1 1 393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000744.1	RefSeq	region	1	393	.	+	.	ID=NZ_PYKF01000744.1:1..393;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000744.1	RefSeq	pseudogene	1	393	.	-	.	ID=gene-C9F04_RS23085;Name=C9F04_RS23085;end_range=393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23085;old_locus_tag=C9F04_23855;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000744.1	Protein Homology	CDS	1	393	.	-	0	ID=cds-C9F04_RS23085;Parent=gene-C9F04_RS23085;Note=Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F04_RS23085;partial=true;product=acetate kinase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000403.1 1 385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000403.1	RefSeq	region	1	385	.	+	.	ID=NZ_PYKF01000403.1:1..385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000403.1	RefSeq	pseudogene	1	385	.	+	.	ID=gene-C9F04_RS12005;Name=C9F04_RS12005;end_range=385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS12005;old_locus_tag=C9F04_12420;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000403.1	Protein Homology	CDS	1	385	.	+	1	ID=cds-C9F04_RS12005;Parent=gene-C9F04_RS12005;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9F04_RS12005;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000416.1 1 385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000416.1	RefSeq	region	1	385	.	+	.	ID=NZ_PYKF01000416.1:1..385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000416.1	RefSeq	gene	1	385	.	-	.	ID=gene-C9F04_RS12370;Name=C9F04_RS12370;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12370;old_locus_tag=C9F04_12785;partial=true;start_range=.,1
NZ_PYKF01000416.1	Protein Homology	CDS	1	385	.	-	2	ID=cds-WP_261771038.1;Parent=gene-C9F04_RS12370;Dbxref=Genbank:WP_261771038.1;Name=WP_261771038.1;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F04_RS12370;partial=true;product=proton-conducting transporter membrane subunit;protein_id=WP_261771038.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000117.1 1 377
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000117.1	RefSeq	region	1	377	.	+	.	ID=NZ_PYKF01000117.1:1..377;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000117.1	RefSeq	pseudogene	1	377	.	+	.	ID=gene-C9F04_RS02260;Name=C9F04_RS02260;end_range=377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02260;old_locus_tag=C9F04_02340;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000117.1	Protein Homology	CDS	1	377	.	+	2	ID=cds-C9F04_RS02260;Parent=gene-C9F04_RS02260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F04_RS02260;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000837.1 1 376
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000837.1	RefSeq	region	1	376	.	+	.	ID=NZ_PYKF01000837.1:1..376;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000837.1	RefSeq	gene	1	376	.	-	.	ID=gene-C9F04_RS26330;Name=C9F04_RS26330;end_range=376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26330;old_locus_tag=C9F04_27250;partial=true;start_range=.,1
NZ_PYKF01000837.1	Protein Homology	CDS	1	376	.	-	2	ID=cds-WP_186799107.1;Parent=gene-C9F04_RS26330;Dbxref=Genbank:WP_186799107.1;Name=WP_186799107.1;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9F04_RS26330;partial=true;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_186799107.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000061.1 1 371
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000061.1	RefSeq	region	1	371	.	+	.	ID=NZ_PYKF01000061.1:1..371;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000061.1	RefSeq	pseudogene	1	205	.	+	.	ID=gene-C9F04_RS01185;Name=C9F04_RS01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01185;old_locus_tag=C9F04_01255;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000061.1	Protein Homology	CDS	1	205	.	+	1	ID=cds-C9F04_RS01185;Parent=gene-C9F04_RS01185;Note=involved in the first step of glutathione biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687193.1;locus_tag=C9F04_RS01185;partial=true;product=glutamate--cysteine ligase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000144.1 1 366
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000144.1	RefSeq	region	1	366	.	+	.	ID=NZ_PYKF01000144.1:1..366;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000144.1	RefSeq	gene	149	224	.	-	.	ID=gene-C9F04_RS03020;Name=C9F04_RS03020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS03020;old_locus_tag=C9F04_03125
NZ_PYKF01000144.1	tRNAscan-SE	tRNA	149	224	.	-	.	ID=rna-C9F04_RS03020;Parent=gene-C9F04_RS03020;anticodon=(pos:complement(188..190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS03020;product=tRNA-Glu
NZ_PYKF01000144.1	tRNAscan-SE	exon	149	224	.	-	.	ID=exon-C9F04_RS03020-1;Parent=rna-C9F04_RS03020;anticodon=(pos:complement(188..190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS03020;product=tRNA-Glu
NZ_PYKF01000144.1	RefSeq	gene	310	366	.	-	.	ID=gene-C9F04_RS03025;Name=C9F04_RS03025;end_range=366,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS03025;old_locus_tag=C9F04_03130;partial=true
NZ_PYKF01000144.1	cmsearch	rRNA	310	366	.	-	.	ID=rna-C9F04_RS03025;Parent=gene-C9F04_RS03025;Dbxref=RFAM:RF00177;end_range=366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS03025;partial=true;product=16S ribosomal RNA
NZ_PYKF01000144.1	cmsearch	exon	310	366	.	-	.	ID=exon-C9F04_RS03025-1;Parent=rna-C9F04_RS03025;Dbxref=RFAM:RF00177;end_range=366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS03025;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PYKF01000125.1 1 366
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000125.1	RefSeq	region	1	366	.	+	.	ID=NZ_PYKF01000125.1:1..366;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000125.1	RefSeq	pseudogene	1	366	.	-	.	ID=gene-C9F04_RS02430;Name=C9F04_RS02430;end_range=366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02430;old_locus_tag=C9F04_02510;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000125.1	Protein Homology	CDS	1	366	.	-	2	ID=cds-C9F04_RS02430;Parent=gene-C9F04_RS02430;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS02430;partial=true;product=oxaloacetate decarboxylase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000003.1 1 363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000003.1	RefSeq	region	1	363	.	+	.	ID=NZ_PYKF01000003.1:1..363;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000003.1	RefSeq	pseudogene	54	363	.	+	.	ID=gene-C9F04_RS00040;Name=C9F04_RS00040;end_range=363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00040;old_locus_tag=C9F04_00055;partial=true;pseudo=true;start_range=.,54
NZ_PYKF01000003.1	Protein Homology	CDS	54	363	.	+	0	ID=cds-C9F04_RS00040;Parent=gene-C9F04_RS00040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F04_RS00040;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,54;transl_table=11
##sequence-region NZ_PYKF01000008.1 1 361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000008.1	RefSeq	region	1	361	.	+	.	ID=NZ_PYKF01000008.1:1..361;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000008.1	RefSeq	gene	1	361	.	-	.	ID=gene-C9F04_RS00080;Name=C9F04_RS00080;end_range=361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00080;old_locus_tag=C9F04_00095;partial=true;start_range=.,1
NZ_PYKF01000008.1	Protein Homology	CDS	1	361	.	-	1	ID=cds-WP_261770721.1;Parent=gene-C9F04_RS00080;Dbxref=Genbank:WP_261770721.1;Name=WP_261770721.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;end_range=361,.;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9F04_RS00080;partial=true;product=pyruvate kinase;protein_id=WP_261770721.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000466.1 1 14080
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000466.1	RefSeq	region	1	14080	.	+	.	ID=NZ_PYKF01000466.1:1..14080;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000466.1	RefSeq	gene	51	566	.	+	.	ID=gene-C9F04_RS14005;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9F04_RS14005;old_locus_tag=C9F04_14455
NZ_PYKF01000466.1	Protein Homology	CDS	51	566	.	+	0	ID=cds-WP_001130194.1;Parent=gene-C9F04_RS14005;Dbxref=Genbank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9F04_RS14005;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	912	2282	.	+	.	ID=gene-C9F04_RS14010;Name=C9F04_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14010;old_locus_tag=C9F04_14460
NZ_PYKF01000466.1	Protein Homology	CDS	912	2282	.	+	0	ID=cds-WP_000645137.1;Parent=gene-C9F04_RS14010;Dbxref=Genbank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9F04_RS14010;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	2331	3869	.	-	.	ID=gene-C9F04_RS14015;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9F04_RS14015;old_locus_tag=C9F04_14465
NZ_PYKF01000466.1	Protein Homology	CDS	2331	3869	.	-	0	ID=cds-WP_146712781.1;Parent=gene-C9F04_RS14015;Dbxref=Genbank:WP_146712781.1;Name=WP_146712781.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9F04_RS14015;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_146712781.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	3886	5058	.	-	.	ID=gene-C9F04_RS14020;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9F04_RS14020;old_locus_tag=C9F04_14470
NZ_PYKF01000466.1	Protein Homology	CDS	3886	5058	.	-	0	ID=cds-WP_001275605.1;Parent=gene-C9F04_RS14020;Dbxref=Genbank:WP_001275605.1;Name=WP_001275605.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9F04_RS14020;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275605.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	5185	5715	.	-	.	ID=gene-C9F04_RS14025;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9F04_RS14025;old_locus_tag=C9F04_14475
NZ_PYKF01000466.1	Protein Homology	CDS	5185	5715	.	-	0	ID=cds-WP_000378431.1;Parent=gene-C9F04_RS14025;Dbxref=Genbank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9F04_RS14025;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	6212	7396	.	-	.	ID=gene-C9F04_RS14030;Name=C9F04_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14030;old_locus_tag=C9F04_14480
NZ_PYKF01000466.1	Protein Homology	CDS	6212	7396	.	-	0	ID=cds-WP_135369228.1;Parent=gene-C9F04_RS14030;Dbxref=Genbank:WP_135369228.1;Name=WP_135369228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9F04_RS14030;product=MFS transporter;protein_id=WP_135369228.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	7561	8556	.	-	.	ID=gene-C9F04_RS14035;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9F04_RS14035;old_locus_tag=C9F04_14485
NZ_PYKF01000466.1	Protein Homology	CDS	7561	8556	.	-	0	ID=cds-WP_001216613.1;Parent=gene-C9F04_RS14035;Dbxref=Genbank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9F04_RS14035;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	8626	9690	.	-	.	ID=gene-C9F04_RS14040;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9F04_RS14040;old_locus_tag=C9F04_14490
NZ_PYKF01000466.1	Protein Homology	CDS	8626	9690	.	-	0	ID=cds-WP_000775021.1;Parent=gene-C9F04_RS14040;Dbxref=Genbank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9F04_RS14040;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	9683	10885	.	-	.	ID=gene-C9F04_RS14045;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9F04_RS14045;old_locus_tag=C9F04_14495
NZ_PYKF01000466.1	Protein Homology	CDS	9683	10885	.	-	0	ID=cds-WP_000985529.1;Parent=gene-C9F04_RS14045;Dbxref=Genbank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F04_RS14045;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	11240	12199	.	-	.	ID=gene-C9F04_RS14050;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9F04_RS14050;old_locus_tag=C9F04_14505
NZ_PYKF01000466.1	Protein Homology	CDS	11240	12199	.	-	0	ID=cds-WP_000777901.1;Parent=gene-C9F04_RS14050;Dbxref=Genbank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9F04_RS14050;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11
NZ_PYKF01000466.1	RefSeq	gene	12210	14080	.	-	.	ID=gene-C9F04_RS14055;Name=nrdE;end_range=14080,.;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9F04_RS14055;old_locus_tag=C9F04_14510;partial=true
NZ_PYKF01000466.1	Protein Homology	CDS	12210	14080	.	-	2	ID=cds-WP_146712782.1;Parent=gene-C9F04_RS14055;Dbxref=Genbank:WP_146712782.1;Name=WP_146712782.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;end_range=14080,.;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9F04_RS14055;partial=true;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_146712782.1;transl_table=11
##sequence-region NZ_PYKF01000346.1 1 358
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000346.1	RefSeq	region	1	358	.	+	.	ID=NZ_PYKF01000346.1:1..358;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000346.1	RefSeq	gene	121	252	.	+	.	ID=gene-C9F04_RS10225;Name=C9F04_RS10225;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F04_RS10225;old_locus_tag=C9F04_10550
NZ_PYKF01000346.1	cmsearch	ncRNA	121	252	.	+	.	ID=rna-C9F04_RS10225;Parent=gene-C9F04_RS10225;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS10225;product=RtT sRNA
NZ_PYKF01000346.1	cmsearch	exon	121	252	.	+	.	ID=exon-C9F04_RS10225-1;Parent=rna-C9F04_RS10225;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS10225;product=RtT sRNA
##sequence-region NZ_PYKF01000020.1 1 357
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000020.1	RefSeq	region	1	357	.	+	.	ID=NZ_PYKF01000020.1:1..357;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000020.1	RefSeq	pseudogene	1	102	.	+	.	ID=gene-C9F04_RS26845;Name=C9F04_RS26845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26845;old_locus_tag=C9F04_00310;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000020.1	Protein Homology	CDS	1	102	.	+	0	ID=cds-C9F04_RS26845;Parent=gene-C9F04_RS26845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9F04_RS26845;partial=true;product=molybdate ABC transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000020.1	RefSeq	pseudogene	102	357	.	+	.	ID=gene-C9F04_RS00290;Name=cysW;end_range=357,.;gbkey=Gene;gene=cysW;gene_biotype=pseudogene;locus_tag=C9F04_RS00290;old_locus_tag=C9F04_00315;partial=true;pseudo=true
NZ_PYKF01000020.1	Protein Homology	CDS	102	357	.	+	0	ID=cds-C9F04_RS00290;Parent=gene-C9F04_RS00290;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=357,.;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9F04_RS00290;partial=true;product=sulfate/thiosulfate ABC transporter permease CysW;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000023.1 1 356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000023.1	RefSeq	region	1	356	.	+	.	ID=NZ_PYKF01000023.1:1..356;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000023.1	RefSeq	pseudogene	1	291	.	+	.	ID=gene-C9F04_RS00315;Name=C9F04_RS00315;end_range=291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00315;old_locus_tag=C9F04_00340;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000023.1	Protein Homology	CDS	1	291	.	+	0	ID=cds-C9F04_RS00315;Parent=gene-C9F04_RS00315;Note=Catalyzes the transfer of electrons from NADH to quinone%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9F04_RS00315;partial=true;product=NADH-quinone oxidoreductase subunit G;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000040.1 1 352
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000040.1	RefSeq	region	1	352	.	+	.	ID=NZ_PYKF01000040.1:1..352;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000040.1	RefSeq	gene	1	352	.	+	.	ID=gene-C9F04_RS00585;Name=C9F04_RS00585;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00585;old_locus_tag=C9F04_00630;partial=true;start_range=.,1
NZ_PYKF01000040.1	Protein Homology	CDS	1	352	.	+	1	ID=cds-WP_146712157.1;Parent=gene-C9F04_RS00585;Dbxref=Genbank:WP_146712157.1;Name=WP_146712157.1;Ontology_term=GO:0005524;end_range=352,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345711.1;locus_tag=C9F04_RS00585;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146712157.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000067.1 1 351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000067.1	RefSeq	region	1	351	.	+	.	ID=NZ_PYKF01000067.1:1..351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000067.1	RefSeq	pseudogene	1	351	.	+	.	ID=gene-C9F04_RS01245;Name=C9F04_RS01245;end_range=351,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01245;old_locus_tag=C9F04_01315;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000067.1	Protein Homology	CDS	1	351	.	+	2	ID=cds-C9F04_RS01245;Parent=gene-C9F04_RS01245;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F04_RS01245;partial=true;product=cell division protein FtsK;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000284.1 1 347
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000284.1	RefSeq	region	1	347	.	+	.	ID=NZ_PYKF01000284.1:1..347;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000284.1	RefSeq	gene	1	201	.	-	.	ID=gene-C9F04_RS08180;Name=C9F04_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08180;old_locus_tag=C9F04_08455;partial=true;start_range=.,1
NZ_PYKF01000284.1	Protein Homology	CDS	1	201	.	-	0	ID=cds-WP_261770763.1;Parent=gene-C9F04_RS08180;Dbxref=Genbank:WP_261770763.1;Name=WP_261770763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02601.1;locus_tag=C9F04_RS08180;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_261770763.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000823.1 1 340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000823.1	RefSeq	region	1	340	.	+	.	ID=NZ_PYKF01000823.1:1..340;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000823.1	RefSeq	pseudogene	1	340	.	-	.	ID=gene-C9F04_RS25865;Name=C9F04_RS25865;end_range=340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS25865;old_locus_tag=C9F04_26760;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000823.1	Protein Homology	CDS	1	340	.	-	2	ID=cds-C9F04_RS25865;Parent=gene-C9F04_RS25865;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F04_RS25865;partial=true;product=oxaloacetate decarboxylase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000731.1 1 340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000731.1	RefSeq	region	1	340	.	+	.	ID=NZ_PYKF01000731.1:1..340;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000731.1	RefSeq	gene	1	340	.	-	.	ID=gene-C9F04_RS22720;Name=C9F04_RS22720;end_range=340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22720;old_locus_tag=C9F04_23480;partial=true;start_range=.,1
NZ_PYKF01000731.1	Protein Homology	CDS	1	340	.	-	0	ID=cds-WP_146713217.1;Parent=gene-C9F04_RS22720;Dbxref=Genbank:WP_146713217.1;Name=WP_146713217.1;Ontology_term=GO:0022857,GO:0016020;end_range=340,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946895.1;locus_tag=C9F04_RS22720;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_146713217.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000090.1 1 332
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000090.1	RefSeq	region	1	332	.	+	.	ID=NZ_PYKF01000090.1:1..332;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000090.1	RefSeq	pseudogene	1	332	.	+	.	ID=gene-C9F04_RS26545;Name=C9F04_RS26545;end_range=332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26545;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000090.1	Protein Homology	CDS	1	332	.	+	1	ID=cds-C9F04_RS26545;Parent=gene-C9F04_RS26545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F04_RS26545;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000122.1 1 331
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000122.1	RefSeq	region	1	331	.	+	.	ID=NZ_PYKF01000122.1:1..331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000122.1	RefSeq	gene	67	331	.	+	.	ID=gene-C9F04_RS02360;Name=C9F04_RS02360;end_range=331,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02360;old_locus_tag=C9F04_02440;partial=true
NZ_PYKF01000122.1	Protein Homology	CDS	67	331	.	+	0	ID=cds-WP_146712233.1;Parent=gene-C9F04_RS02360;Dbxref=Genbank:WP_146712233.1;Name=WP_146712233.1;end_range=331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=C9F04_RS02360;partial=true;product=AAA family ATPase;protein_id=WP_146712233.1;transl_table=11
##sequence-region NZ_PYKF01000739.1 1 14053
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000739.1	RefSeq	region	1	14053	.	+	.	ID=NZ_PYKF01000739.1:1..14053;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000739.1	RefSeq	gene	33	2333	.	+	.	ID=gene-C9F04_RS22955;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9F04_RS22955;old_locus_tag=C9F04_23720
NZ_PYKF01000739.1	Protein Homology	CDS	33	2333	.	+	0	ID=cds-WP_146713228.1;Parent=gene-C9F04_RS22955;Dbxref=Genbank:WP_146713228.1;Name=WP_146713228.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9F04_RS22955;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_146713228.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	2337	3446	.	+	.	ID=gene-C9F04_RS22960;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9F04_RS22960;old_locus_tag=C9F04_23725
NZ_PYKF01000739.1	Protein Homology	CDS	2337	3446	.	+	0	ID=cds-WP_146713229.1;Parent=gene-C9F04_RS22960;Dbxref=Genbank:WP_146713229.1;Name=WP_146713229.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9F04_RS22960;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_146713229.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	3428	6970	.	+	.	ID=gene-C9F04_RS22965;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=C9F04_RS22965;old_locus_tag=C9F04_23730
NZ_PYKF01000739.1	Protein Homology	CDS	3428	6970	.	+	0	ID=cds-WP_135369453.1;Parent=gene-C9F04_RS22965;Dbxref=Genbank:WP_135369453.1;Name=WP_135369453.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F04_RS22965;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_135369453.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	7144	9150	.	+	.	ID=gene-C9F04_RS22970;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9F04_RS22970;old_locus_tag=C9F04_23740
NZ_PYKF01000739.1	Protein Homology	CDS	7144	9150	.	+	0	ID=cds-WP_146713230.1;Parent=gene-C9F04_RS22970;Dbxref=Genbank:WP_146713230.1;Name=WP_146713230.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9F04_RS22970;product=biofilm formation regulator HmsP;protein_id=WP_146713230.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	9308	10594	.	+	.	ID=gene-C9F04_RS22975;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9F04_RS22975;old_locus_tag=C9F04_23745
NZ_PYKF01000739.1	Protein Homology	CDS	9308	10594	.	+	0	ID=cds-WP_146713231.1;Parent=gene-C9F04_RS22975;Dbxref=Genbank:WP_146713231.1;Name=WP_146713231.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9F04_RS22975;product=C4-dicarboxylate transporter DctC;protein_id=WP_146713231.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	10814	12301	.	+	.	ID=gene-C9F04_RS22980;Name=C9F04_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22980;old_locus_tag=C9F04_23750
NZ_PYKF01000739.1	Protein Homology	CDS	10814	12301	.	+	0	ID=cds-WP_123220466.1;Parent=gene-C9F04_RS22980;Dbxref=Genbank:WP_123220466.1;Name=WP_123220466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9F04_RS22980;product=insulinase family protein;protein_id=WP_123220466.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	12355	13284	.	-	.	ID=gene-C9F04_RS22985;Name=C9F04_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22985;old_locus_tag=C9F04_23755
NZ_PYKF01000739.1	Protein Homology	CDS	12355	13284	.	-	0	ID=cds-WP_135369454.1;Parent=gene-C9F04_RS22985;Dbxref=Genbank:WP_135369454.1;Name=WP_135369454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9F04_RS22985;product=sugar kinase;protein_id=WP_135369454.1;transl_table=11
NZ_PYKF01000739.1	RefSeq	gene	13513	14053	.	+	.	ID=gene-C9F04_RS22990;Name=pdeH;end_range=14053,.;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9F04_RS22990;old_locus_tag=C9F04_23760;partial=true
NZ_PYKF01000739.1	Protein Homology	CDS	13513	14053	.	+	0	ID=cds-WP_146713232.1;Parent=gene-C9F04_RS22990;Dbxref=Genbank:WP_146713232.1;Name=WP_146713232.1;end_range=14053,.;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9F04_RS22990;partial=true;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_146713232.1;transl_table=11
##sequence-region NZ_PYKF01000822.1 1 331
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000822.1	RefSeq	region	1	331	.	+	.	ID=NZ_PYKF01000822.1:1..331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000822.1	RefSeq	gene	1	320	.	-	.	ID=gene-C9F04_RS25860;Name=C9F04_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25860;old_locus_tag=C9F04_26755;partial=true;start_range=.,1
NZ_PYKF01000822.1	Protein Homology	CDS	1	320	.	-	0	ID=cds-WP_186799104.1;Parent=gene-C9F04_RS25860;Dbxref=Genbank:WP_186799104.1;Name=WP_186799104.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F04_RS25860;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_186799104.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000562.1 1 329
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000562.1	RefSeq	region	1	329	.	+	.	ID=NZ_PYKF01000562.1:1..329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000562.1	RefSeq	gene	1	329	.	+	.	ID=gene-C9F04_RS16785;Name=C9F04_RS16785;end_range=329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16785;old_locus_tag=C9F04_17320;partial=true;start_range=.,1
NZ_PYKF01000562.1	Protein Homology	CDS	1	329	.	+	2	ID=cds-WP_186799049.1;Parent=gene-C9F04_RS16785;Dbxref=Genbank:WP_186799049.1;Name=WP_186799049.1;end_range=329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F04_RS16785;partial=true;product=type VI secretion system baseplate subunit TssF;protein_id=WP_186799049.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000586.1 1 328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000586.1	RefSeq	region	1	328	.	+	.	ID=NZ_PYKF01000586.1:1..328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000586.1	RefSeq	gene	1	328	.	+	.	ID=gene-C9F04_RS17475;Name=C9F04_RS17475;end_range=328,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS17475;old_locus_tag=C9F04_18035;partial=true;start_range=.,1
NZ_PYKF01000586.1	cmsearch	rRNA	1	328	.	+	.	ID=rna-C9F04_RS17475;Parent=gene-C9F04_RS17475;Dbxref=RFAM:RF02541;end_range=328,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS17475;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKF01000586.1	cmsearch	exon	1	328	.	+	.	ID=exon-C9F04_RS17475-1;Parent=rna-C9F04_RS17475;Dbxref=RFAM:RF02541;end_range=328,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS17475;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKF01000086.1 1 328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000086.1	RefSeq	region	1	328	.	+	.	ID=NZ_PYKF01000086.1:1..328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000086.1	RefSeq	gene	1	328	.	-	.	ID=gene-C9F04_RS01705;Name=C9F04_RS01705;end_range=328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01705;old_locus_tag=C9F04_01780;partial=true;start_range=.,1
NZ_PYKF01000086.1	Protein Homology	CDS	1	328	.	-	0	ID=cds-WP_261770732.1;Parent=gene-C9F04_RS01705;Dbxref=Genbank:WP_261770732.1;Name=WP_261770732.1;end_range=328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9F04_RS01705;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_261770732.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000160.1 1 322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000160.1	RefSeq	region	1	322	.	+	.	ID=NZ_PYKF01000160.1:1..322;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000160.1	RefSeq	pseudogene	1	322	.	+	.	ID=gene-C9F04_RS03370;Name=C9F04_RS03370;end_range=322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03370;old_locus_tag=C9F04_03480;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000160.1	Protein Homology	CDS	1	322	.	+	0	ID=cds-C9F04_RS03370;Parent=gene-C9F04_RS03370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9F04_RS03370;partial=true;product=ATP-dependent helicase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000031.1 1 318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000031.1	RefSeq	region	1	318	.	+	.	ID=NZ_PYKF01000031.1:1..318;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000031.1	RefSeq	pseudogene	41	318	.	-	.	ID=gene-C9F04_RS00475;Name=C9F04_RS00475;end_range=318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00475;old_locus_tag=C9F04_00505;partial=true;pseudo=true;start_range=.,41
NZ_PYKF01000031.1	Protein Homology	CDS	41	318	.	-	2	ID=cds-C9F04_RS00475;Parent=gene-C9F04_RS00475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9F04_RS00475;partial=true;product=phosphatase;pseudo=true;start_range=.,41;transl_table=11
##sequence-region NZ_PYKF01000487.1 1 312
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000487.1	RefSeq	region	1	312	.	+	.	ID=NZ_PYKF01000487.1:1..312;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000487.1	RefSeq	gene	1	156	.	+	.	ID=gene-C9F04_RS27065;Name=C9F04_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27065;partial=true;start_range=.,1
NZ_PYKF01000487.1	Protein Homology	CDS	1	156	.	+	0	ID=cds-WP_186799033.1;Parent=gene-C9F04_RS27065;Dbxref=Genbank:WP_186799033.1;Name=WP_186799033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9F04_RS27065;partial=true;product=hypothetical protein;protein_id=WP_186799033.1;start_range=.,1;transl_table=11
NZ_PYKF01000487.1	RefSeq	pseudogene	214	312	.	-	.	ID=gene-C9F04_RS14625;Name=C9F04_RS14625;end_range=312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14625;old_locus_tag=C9F04_15110;partial=true;pseudo=true
NZ_PYKF01000487.1	Protein Homology	CDS	214	312	.	-	0	ID=cds-C9F04_RS14625;Parent=gene-C9F04_RS14625;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9F04_RS14625;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000072.1 1 311
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000072.1	RefSeq	region	1	311	.	+	.	ID=NZ_PYKF01000072.1:1..311;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000072.1	RefSeq	pseudogene	1	311	.	+	.	ID=gene-C9F04_RS01415;Name=mraY;end_range=311,.;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F04_RS01415;old_locus_tag=C9F04_01485;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000072.1	Protein Homology	CDS	1	311	.	+	0	ID=cds-C9F04_RS01415;Parent=gene-C9F04_RS01415;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=311,.;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874146.1;locus_tag=C9F04_RS01415;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000382.1 1 14026
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000382.1	RefSeq	region	1	14026	.	+	.	ID=NZ_PYKF01000382.1:1..14026;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000382.1	RefSeq	pseudogene	10	436	.	-	.	ID=gene-C9F04_RS11190;Name=C9F04_RS11190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11190;old_locus_tag=C9F04_11550;partial=true;pseudo=true;start_range=.,10
NZ_PYKF01000382.1	Protein Homology	CDS	10	436	.	-	0	ID=cds-C9F04_RS11190;Parent=gene-C9F04_RS11190;Note=part of the microcin C transport system%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9F04_RS11190;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,10;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	436	1530	.	-	.	ID=gene-C9F04_RS11195;Name=C9F04_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11195;old_locus_tag=C9F04_11555
NZ_PYKF01000382.1	Protein Homology	CDS	436	1530	.	-	0	ID=cds-WP_146712643.1;Parent=gene-C9F04_RS11195;Dbxref=Genbank:WP_146712643.1;Name=WP_146712643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9F04_RS11195;product=microcin C ABC transporter permease YejB;protein_id=WP_146712643.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	1540	3345	.	-	.	ID=gene-C9F04_RS11200;Name=C9F04_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11200;old_locus_tag=C9F04_11560
NZ_PYKF01000382.1	Protein Homology	CDS	1540	3345	.	-	0	ID=cds-WP_146712644.1;Parent=gene-C9F04_RS11200;Dbxref=Genbank:WP_146712644.1;Name=WP_146712644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9F04_RS11200;product=extracellular solute-binding protein;protein_id=WP_146712644.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	3452	5008	.	-	.	ID=gene-C9F04_RS11205;Name=C9F04_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11205;old_locus_tag=C9F04_11565
NZ_PYKF01000382.1	Protein Homology	CDS	3452	5008	.	-	0	ID=cds-WP_146712645.1;Parent=gene-C9F04_RS11205;Dbxref=Genbank:WP_146712645.1;Name=WP_146712645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9F04_RS11205;product=cyclic di-GMP phosphodiesterase;protein_id=WP_146712645.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	5334	5906	.	-	.	ID=gene-C9F04_RS11210;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9F04_RS11210;old_locus_tag=C9F04_11575
NZ_PYKF01000382.1	Protein Homology	CDS	5334	5906	.	-	0	ID=cds-WP_000241015.1;Parent=gene-C9F04_RS11210;Dbxref=Genbank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9F04_RS11210;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	6320	7039	.	-	.	ID=gene-C9F04_RS11215;Name=C9F04_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11215;old_locus_tag=C9F04_11585
NZ_PYKF01000382.1	Protein Homology	CDS	6320	7039	.	-	0	ID=cds-WP_000178091.1;Parent=gene-C9F04_RS11215;Dbxref=Genbank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9F04_RS11215;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	7069	8055	.	-	.	ID=gene-C9F04_RS11220;Name=C9F04_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11220;old_locus_tag=C9F04_11590
NZ_PYKF01000382.1	Protein Homology	CDS	7069	8055	.	-	0	ID=cds-WP_000169350.1;Parent=gene-C9F04_RS11220;Dbxref=Genbank:WP_000169350.1;Name=WP_000169350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9F04_RS11220;product=GTP-binding protein;protein_id=WP_000169350.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	8267	8839	.	-	.	ID=gene-C9F04_RS11225;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9F04_RS11225;old_locus_tag=C9F04_11595
NZ_PYKF01000382.1	Protein Homology	CDS	8267	8839	.	-	0	ID=cds-WP_001136822.1;Parent=gene-C9F04_RS11225;Dbxref=Genbank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9F04_RS11225;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	9163	9417	.	+	.	ID=gene-C9F04_RS11230;Name=C9F04_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11230;old_locus_tag=C9F04_11600
NZ_PYKF01000382.1	Protein Homology	CDS	9163	9417	.	+	0	ID=cds-WP_001523448.1;Parent=gene-C9F04_RS11230;Dbxref=Genbank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9F04_RS11230;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	9955	10077	.	+	.	ID=gene-C9F04_RS11235;Name=C9F04_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11235;old_locus_tag=C9F04_11610
NZ_PYKF01000382.1	Protein Homology	CDS	9955	10077	.	+	0	ID=cds-WP_001519564.1;Parent=gene-C9F04_RS11235;Dbxref=Genbank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9F04_RS11235;product=membrane protein;protein_id=WP_001519564.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	10079	10744	.	+	.	ID=gene-C9F04_RS11240;Name=C9F04_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11240;old_locus_tag=C9F04_11615
NZ_PYKF01000382.1	Protein Homology	CDS	10079	10744	.	+	0	ID=cds-WP_135369714.1;Parent=gene-C9F04_RS11240;Dbxref=Genbank:WP_135369714.1;Name=WP_135369714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9F04_RS11240;product=hypothetical protein;protein_id=WP_135369714.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	10809	11990	.	-	.	ID=gene-C9F04_RS11245;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9F04_RS11245;old_locus_tag=C9F04_11620
NZ_PYKF01000382.1	Protein Homology	CDS	10809	11990	.	-	0	ID=cds-WP_135369713.1;Parent=gene-C9F04_RS11245;Dbxref=Genbank:WP_135369713.1;Name=WP_135369713.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016021;gbkey=CDS;gene=setB;go_component=integral component of membrane|0016021||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9F04_RS11245;product=sugar efflux transporter SetB;protein_id=WP_135369713.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	12359	13489	.	+	.	ID=gene-C9F04_RS11250;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9F04_RS11250;old_locus_tag=C9F04_11625
NZ_PYKF01000382.1	Protein Homology	CDS	12359	13489	.	+	0	ID=cds-WP_146712646.1;Parent=gene-C9F04_RS11250;Dbxref=Genbank:WP_146712646.1;Name=WP_146712646.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9F04_RS11250;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_146712646.1;transl_table=11
NZ_PYKF01000382.1	RefSeq	gene	13489	14026	.	+	.	ID=gene-C9F04_RS11255;Name=C9F04_RS11255;end_range=14026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11255;old_locus_tag=C9F04_11630;partial=true
NZ_PYKF01000382.1	Protein Homology	CDS	13489	14026	.	+	0	ID=cds-WP_261770925.1;Parent=gene-C9F04_RS11255;Dbxref=Genbank:WP_261770925.1;Name=WP_261770925.1;end_range=14026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9F04_RS11255;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_261770925.1;transl_table=11
##sequence-region NZ_PYKF01000035.1 1 304
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000035.1	RefSeq	region	1	304	.	+	.	ID=NZ_PYKF01000035.1:1..304;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000035.1	RefSeq	gene	1	304	.	-	.	ID=gene-C9F04_RS00525;Name=C9F04_RS00525;end_range=304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00525;old_locus_tag=C9F04_00555;partial=true;start_range=.,1
NZ_PYKF01000035.1	Protein Homology	CDS	1	304	.	-	0	ID=cds-WP_146712151.1;Parent=gene-C9F04_RS00525;Dbxref=Genbank:WP_146712151.1;Name=WP_146712151.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=304,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F04_RS00525;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_146712151.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000592.1 1 302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000592.1	RefSeq	region	1	302	.	+	.	ID=NZ_PYKF01000592.1:1..302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000592.1	RefSeq	gene	1	302	.	+	.	ID=gene-C9F04_RS17605;Name=C9F04_RS17605;end_range=302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17605;old_locus_tag=C9F04_18165;partial=true;start_range=.,1
NZ_PYKF01000592.1	Protein Homology	CDS	1	302	.	+	2	ID=cds-WP_146712957.1;Parent=gene-C9F04_RS17605;Dbxref=Genbank:WP_146712957.1;Name=WP_146712957.1;Ontology_term=GO:0016020,GO:0016021;end_range=302,.;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178998.1;locus_tag=C9F04_RS17605;partial=true;product=EamA family transporter;protein_id=WP_146712957.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000017.1 1 298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000017.1	RefSeq	region	1	298	.	+	.	ID=NZ_PYKF01000017.1:1..298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000017.1	RefSeq	gene	1	298	.	-	.	ID=gene-C9F04_RS00200;Name=C9F04_RS00200;end_range=298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00200;old_locus_tag=C9F04_00215;partial=true;start_range=.,1
NZ_PYKF01000017.1	Protein Homology	CDS	1	298	.	-	0	ID=cds-WP_146712132.1;Parent=gene-C9F04_RS00200;Dbxref=Genbank:WP_146712132.1;Name=WP_146712132.1;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F04_RS00200;partial=true;product=hypothetical protein;protein_id=WP_146712132.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000115.1 1 295
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000115.1	RefSeq	region	1	295	.	+	.	ID=NZ_PYKF01000115.1:1..295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000115.1	RefSeq	pseudogene	1	295	.	+	.	ID=gene-C9F04_RS02250;Name=C9F04_RS02250;end_range=295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02250;old_locus_tag=C9F04_02330;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000115.1	Protein Homology	CDS	1	295	.	+	1	ID=cds-C9F04_RS02250;Parent=gene-C9F04_RS02250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442506.1;locus_tag=C9F04_RS02250;partial=true;product=DNA polymerase I;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000011.1 1 294
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000011.1	RefSeq	region	1	294	.	+	.	ID=NZ_PYKF01000011.1:1..294;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000011.1	RefSeq	pseudogene	1	294	.	+	.	ID=gene-C9F04_RS00095;Name=C9F04_RS00095;end_range=294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00095;old_locus_tag=C9F04_00110;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000011.1	Protein Homology	CDS	1	294	.	+	2	ID=cds-C9F04_RS00095;Parent=gene-C9F04_RS00095;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016021;end_range=294,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F04_RS00095;partial=true;product=HAD-IC family P-type ATPase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000372.1 1 293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000372.1	RefSeq	region	1	293	.	+	.	ID=NZ_PYKF01000372.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
##sequence-region NZ_PYKF01000270.1 1 293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000270.1	RefSeq	region	1	293	.	+	.	ID=NZ_PYKF01000270.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000270.1	RefSeq	gene	14	293	.	-	.	ID=gene-C9F04_RS07500;Name=C9F04_RS07500;end_range=293,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS07500;old_locus_tag=C9F04_07745;partial=true
NZ_PYKF01000270.1	Protein Homology	CDS	14	293	.	-	1	ID=cds-WP_186799009.1;Parent=gene-C9F04_RS07500;Dbxref=Genbank:WP_186799009.1;Name=WP_186799009.1;Ontology_term=GO:0006865,GO:0016020;end_range=293,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9F04_RS07500;partial=true;product=LysE family transporter;protein_id=WP_186799009.1;transl_table=11
##sequence-region NZ_PYKF01000659.1 1 292
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000659.1	RefSeq	region	1	292	.	+	.	ID=NZ_PYKF01000659.1:1..292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000659.1	RefSeq	gene	1	292	.	-	.	ID=gene-C9F04_RS20175;Name=C9F04_RS20175;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS20175;old_locus_tag=C9F04_20835;partial=true;start_range=.,1
NZ_PYKF01000659.1	Protein Homology	CDS	1	292	.	-	0	ID=cds-WP_261771407.1;Parent=gene-C9F04_RS20175;Dbxref=Genbank:WP_261771407.1;Name=WP_261771407.1;Ontology_term=GO:0006520,GO:0016829;end_range=292,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9F04_RS20175;partial=true;product=beta-eliminating lyase-related protein;protein_id=WP_261771407.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000091.1 1 289
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000091.1	RefSeq	region	1	289	.	+	.	ID=NZ_PYKF01000091.1:1..289;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000091.1	RefSeq	gene	1	289	.	+	.	ID=gene-C9F04_RS01730;Name=C9F04_RS01730;end_range=289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01730;old_locus_tag=C9F04_01810;partial=true;start_range=.,1
NZ_PYKF01000091.1	Protein Homology	CDS	1	289	.	+	2	ID=cds-WP_261770733.1;Parent=gene-C9F04_RS01730;Dbxref=Genbank:WP_261770733.1;Name=WP_261770733.1;Ontology_term=GO:0016310,GO:0016772;end_range=289,.;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9F04_RS01730;partial=true;product=PEP-utilizing enzyme;protein_id=WP_261770733.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000756.1 1 288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000756.1	RefSeq	region	1	288	.	+	.	ID=NZ_PYKF01000756.1:1..288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000756.1	RefSeq	pseudogene	33	288	.	-	.	ID=gene-C9F04_RS23515;Name=C9F04_RS23515;end_range=288,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23515;old_locus_tag=C9F04_24295;partial=true;pseudo=true;start_range=.,33
NZ_PYKF01000756.1	Protein Homology	CDS	33	288	.	-	1	ID=cds-C9F04_RS23515;Parent=gene-C9F04_RS23515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819013.1;locus_tag=C9F04_RS23515;partial=true;product=DEAD/DEAH box helicase;pseudo=true;start_range=.,33;transl_table=11
##sequence-region NZ_PYKF01000398.1 1 14012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000398.1	RefSeq	region	1	14012	.	+	.	ID=NZ_PYKF01000398.1:1..14012;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000398.1	RefSeq	gene	1	1049	.	+	.	ID=gene-C9F04_RS11770;Name=C9F04_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11770;old_locus_tag=C9F04_12170;partial=true;start_range=.,1
NZ_PYKF01000398.1	Protein Homology	CDS	1	1049	.	+	2	ID=cds-WP_261770966.1;Parent=gene-C9F04_RS11770;Dbxref=Genbank:WP_261770966.1;Name=WP_261770966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9F04_RS11770;partial=true;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_261770966.1;start_range=.,1;transl_table=11
NZ_PYKF01000398.1	RefSeq	gene	1459	4095	.	+	.	ID=gene-C9F04_RS11775;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9F04_RS11775;old_locus_tag=C9F04_12180
NZ_PYKF01000398.1	Protein Homology	CDS	1459	4095	.	+	0	ID=cds-WP_001281271.1;Parent=gene-C9F04_RS11775;Dbxref=Genbank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F04_RS11775;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11
NZ_PYKF01000398.1	RefSeq	pseudogene	4213	7008	.	+	.	ID=gene-C9F04_RS11780;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=pseudogene;locus_tag=C9F04_RS11780;old_locus_tag=C9F04_12185;pseudo=true
NZ_PYKF01000398.1	Protein Homology	CDS	4213	7008	.	+	0	ID=cds-C9F04_RS11780;Parent=gene-C9F04_RS11780;Note=internal stop;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016021;gbkey=CDS;gene=rcsC;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9F04_RS11780;product=two-component system sensor histidine kinase RcsC;pseudo=true;transl_table=11
NZ_PYKF01000398.1	RefSeq	gene	7162	7812	.	-	.	ID=gene-C9F04_RS11785;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9F04_RS11785;old_locus_tag=C9F04_12190
NZ_PYKF01000398.1	Protein Homology	CDS	7162	7812	.	-	0	ID=cds-WP_146712664.1;Parent=gene-C9F04_RS11785;Dbxref=Genbank:WP_146712664.1;Name=WP_146712664.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9F04_RS11785;product=response regulator transcription factor RcsB;protein_id=WP_146712664.1;transl_table=11
NZ_PYKF01000398.1	RefSeq	gene	7829	10498	.	-	.	ID=gene-C9F04_RS11790;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9F04_RS11790;old_locus_tag=C9F04_12195
NZ_PYKF01000398.1	Protein Homology	CDS	7829	10498	.	-	0	ID=cds-WP_135369377.1;Parent=gene-C9F04_RS11790;Dbxref=Genbank:WP_135369377.1;Name=WP_135369377.1;Ontology_term=GO:0000160,GO:0009927,GO:0005887;gbkey=CDS;gene=rcsD;go_component=integral component of plasma membrane|0005887||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F04_RS11790;product=phosphotransferase RcsD;protein_id=WP_135369377.1;transl_table=11
NZ_PYKF01000398.1	RefSeq	gene	11227	12363	.	+	.	ID=gene-C9F04_RS11795;Name=C9F04_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11795;old_locus_tag=C9F04_12205
NZ_PYKF01000398.1	Protein Homology	CDS	11227	12363	.	+	0	ID=cds-WP_000865521.1;Parent=gene-C9F04_RS11795;Dbxref=Genbank:WP_000865521.1;Name=WP_000865521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9F04_RS11795;product=porin OmpC;protein_id=WP_000865521.1;transl_table=11
NZ_PYKF01000398.1	RefSeq	gene	12478	13530	.	+	.	ID=gene-C9F04_RS11800;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9F04_RS11800;old_locus_tag=C9F04_12210
NZ_PYKF01000398.1	Protein Homology	CDS	12478	13530	.	+	0	ID=cds-WP_146712665.1;Parent=gene-C9F04_RS11800;Dbxref=Genbank:WP_146712665.1;Name=WP_146712665.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9F04_RS11800;product=FAD:protein FMN transferase ApbE;protein_id=WP_146712665.1;transl_table=11
NZ_PYKF01000398.1	RefSeq	pseudogene	13611	14012	.	+	.	ID=gene-C9F04_RS11805;Name=C9F04_RS11805;end_range=14012,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11805;old_locus_tag=C9F04_12215;partial=true;pseudo=true
NZ_PYKF01000398.1	Protein Homology	CDS	13611	14012	.	+	0	ID=cds-C9F04_RS11805;Parent=gene-C9F04_RS11805;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14012,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9F04_RS11805;partial=true;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000773.1 1 31030
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000773.1	RefSeq	region	1	31030	.	+	.	ID=NZ_PYKF01000773.1:1..31030;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000773.1	RefSeq	gene	156	920	.	-	.	ID=gene-C9F04_RS24045;Name=C9F04_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24045;old_locus_tag=C9F04_24855
NZ_PYKF01000773.1	Protein Homology	CDS	156	920	.	-	0	ID=cds-WP_000052612.1;Parent=gene-C9F04_RS24045;Dbxref=Genbank:WP_000052612.1;Name=WP_000052612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526572.1;locus_tag=C9F04_RS24045;product=hypothetical protein;protein_id=WP_000052612.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	pseudogene	1400	1486	.	+	.	ID=gene-C9F04_RS27265;Name=C9F04_RS27265;end_range=1486,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS27265;partial=true;pseudo=true
NZ_PYKF01000773.1	Protein Homology	CDS	1400	1486	.	+	0	ID=cds-C9F04_RS27265;Parent=gene-C9F04_RS27265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1486,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014871.2;locus_tag=C9F04_RS27265;partial=true;product=5'-nucleotidase;pseudo=true;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	1497	1850	.	-	.	ID=gene-C9F04_RS27270;Name=C9F04_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27270
NZ_PYKF01000773.1	Protein Homology	CDS	1497	1850	.	-	0	ID=cds-WP_240776450.1;Parent=gene-C9F04_RS27270;Dbxref=Genbank:WP_240776450.1;Name=WP_240776450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000395302.1;locus_tag=C9F04_RS27270;product=hypothetical protein;protein_id=WP_240776450.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	1895	2086	.	-	.	ID=gene-C9F04_RS24055;Name=C9F04_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24055;old_locus_tag=C9F04_24865
NZ_PYKF01000773.1	GeneMarkS-2+	CDS	1895	2086	.	-	0	ID=cds-WP_012218477.1;Parent=gene-C9F04_RS24055;Dbxref=Genbank:WP_012218477.1;Name=WP_012218477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS24055;product=hypothetical protein;protein_id=WP_012218477.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	2834	3283	.	+	.	ID=gene-C9F04_RS24060;Name=C9F04_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24060;old_locus_tag=C9F04_24870
NZ_PYKF01000773.1	Protein Homology	CDS	2834	3283	.	+	0	ID=cds-WP_135369545.1;Parent=gene-C9F04_RS24060;Dbxref=Genbank:WP_135369545.1;Name=WP_135369545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9F04_RS24060;product=transcriptional regulator;protein_id=WP_135369545.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	3383	3670	.	-	.	ID=gene-C9F04_RS24065;Name=C9F04_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24065;old_locus_tag=C9F04_24875
NZ_PYKF01000773.1	Protein Homology	CDS	3383	3670	.	-	0	ID=cds-WP_000839831.1;Parent=gene-C9F04_RS24065;Dbxref=Genbank:WP_000839831.1;Name=WP_000839831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9F04_RS24065;product=hypothetical protein;protein_id=WP_000839831.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	3709	4554	.	-	.	ID=gene-C9F04_RS24070;Name=C9F04_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24070;old_locus_tag=C9F04_24880
NZ_PYKF01000773.1	Protein Homology	CDS	3709	4554	.	-	0	ID=cds-WP_000291393.1;Parent=gene-C9F04_RS24070;Dbxref=Genbank:WP_000291393.1;Name=WP_000291393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9F04_RS24070;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	4619	5350	.	-	.	ID=gene-C9F04_RS24075;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9F04_RS24075;old_locus_tag=C9F04_24885
NZ_PYKF01000773.1	Protein Homology	CDS	4619	5350	.	-	0	ID=cds-WP_135369546.1;Parent=gene-C9F04_RS24075;Dbxref=Genbank:WP_135369546.1;Name=WP_135369546.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9F04_RS24075;product=fimbrial chaperone BcfG;protein_id=WP_135369546.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	5316	5834	.	-	.	ID=gene-C9F04_RS24080;Name=C9F04_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24080;old_locus_tag=C9F04_24890
NZ_PYKF01000773.1	Protein Homology	CDS	5316	5834	.	-	0	ID=cds-WP_001243232.1;Parent=gene-C9F04_RS24080;Dbxref=Genbank:WP_001243232.1;Name=WP_001243232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9F04_RS24080;product=fimbrial protein BcfF;protein_id=WP_001243232.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	5850	6395	.	-	.	ID=gene-C9F04_RS24085;Name=C9F04_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24085;old_locus_tag=C9F04_24895
NZ_PYKF01000773.1	Protein Homology	CDS	5850	6395	.	-	0	ID=cds-WP_001082038.1;Parent=gene-C9F04_RS24085;Dbxref=Genbank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9F04_RS24085;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	6396	7403	.	-	.	ID=gene-C9F04_RS24090;Name=C9F04_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24090;old_locus_tag=C9F04_24900
NZ_PYKF01000773.1	Protein Homology	CDS	6396	7403	.	-	0	ID=cds-WP_000701245.1;Parent=gene-C9F04_RS24090;Dbxref=Genbank:WP_000701245.1;Name=WP_000701245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9F04_RS24090;product=fimbrial protein BcfD;protein_id=WP_000701245.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	7404	10025	.	-	.	ID=gene-C9F04_RS24095;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9F04_RS24095;old_locus_tag=C9F04_24905
NZ_PYKF01000773.1	Protein Homology	CDS	7404	10025	.	-	0	ID=cds-WP_001245865.1;Parent=gene-C9F04_RS24095;Dbxref=Genbank:WP_001245865.1;Name=WP_001245865.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9F04_RS24095;product=fimbrial usher BcfC;protein_id=WP_001245865.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	10030	10716	.	-	.	ID=gene-C9F04_RS24100;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9F04_RS24100;old_locus_tag=C9F04_24910
NZ_PYKF01000773.1	Protein Homology	CDS	10030	10716	.	-	0	ID=cds-WP_146713279.1;Parent=gene-C9F04_RS24100;Dbxref=Genbank:WP_146713279.1;Name=WP_146713279.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9F04_RS24100;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_146713279.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	10817	11359	.	-	.	ID=gene-C9F04_RS24105;Name=C9F04_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24105;old_locus_tag=C9F04_24915
NZ_PYKF01000773.1	Protein Homology	CDS	10817	11359	.	-	0	ID=cds-WP_000743357.1;Parent=gene-C9F04_RS24105;Dbxref=Genbank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9F04_RS24105;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	11789	12493	.	-	.	ID=gene-C9F04_RS24110;Name=C9F04_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24110;old_locus_tag=C9F04_24920
NZ_PYKF01000773.1	Protein Homology	CDS	11789	12493	.	-	0	ID=cds-WP_023242936.1;Parent=gene-C9F04_RS24110;Dbxref=Genbank:WP_023242936.1;Name=WP_023242936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9F04_RS24110;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023242936.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	12774	15770	.	-	.	ID=gene-C9F04_RS24115;Name=C9F04_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24115;old_locus_tag=C9F04_24925
NZ_PYKF01000773.1	Protein Homology	CDS	12774	15770	.	-	0	ID=cds-WP_146713280.1;Parent=gene-C9F04_RS24115;Dbxref=Genbank:WP_146713280.1;Name=WP_146713280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9F04_RS24115;product=chitinase;protein_id=WP_146713280.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	15863	17962	.	-	.	ID=gene-C9F04_RS24120;Name=C9F04_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24120;old_locus_tag=C9F04_24930
NZ_PYKF01000773.1	Protein Homology	CDS	15863	17962	.	-	0	ID=cds-WP_146713281.1;Parent=gene-C9F04_RS24120;Dbxref=Genbank:WP_146713281.1;Name=WP_146713281.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9F04_RS24120;product=glycosyl hydrolase family 18 protein;protein_id=WP_146713281.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	18343	18786	.	+	.	ID=gene-C9F04_RS24125;Name=C9F04_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24125;old_locus_tag=C9F04_24935
NZ_PYKF01000773.1	Protein Homology	CDS	18343	18786	.	+	0	ID=cds-WP_000860681.1;Parent=gene-C9F04_RS24125;Dbxref=Genbank:WP_000860681.1;Name=WP_000860681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9F04_RS24125;product=transcriptional regulator;protein_id=WP_000860681.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	18803	19336	.	+	.	ID=gene-C9F04_RS24130;Name=C9F04_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24130;old_locus_tag=C9F04_24940
NZ_PYKF01000773.1	Protein Homology	CDS	18803	19336	.	+	0	ID=cds-WP_001068132.1;Parent=gene-C9F04_RS24130;Dbxref=Genbank:WP_001068132.1;Name=WP_001068132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9F04_RS24130;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	19397	19741	.	-	.	ID=gene-C9F04_RS24135;Name=C9F04_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24135;old_locus_tag=C9F04_24945
NZ_PYKF01000773.1	Protein Homology	CDS	19397	19741	.	-	0	ID=cds-WP_000026889.1;Parent=gene-C9F04_RS24135;Dbxref=Genbank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9F04_RS24135;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	19868	20815	.	-	.	ID=gene-C9F04_RS24140;Name=C9F04_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24140;old_locus_tag=C9F04_24950
NZ_PYKF01000773.1	Protein Homology	CDS	19868	20815	.	-	0	ID=cds-WP_000534907.1;Parent=gene-C9F04_RS24140;Dbxref=Genbank:WP_000534907.1;Name=WP_000534907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9F04_RS24140;product=LysR family transcriptional regulator;protein_id=WP_000534907.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	21008	21148	.	+	.	ID=gene-C9F04_RS26705;Name=C9F04_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26705
NZ_PYKF01000773.1	GeneMarkS-2+	CDS	21008	21148	.	+	0	ID=cds-WP_186799093.1;Parent=gene-C9F04_RS26705;Dbxref=Genbank:WP_186799093.1;Name=WP_186799093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26705;product=hypothetical protein;protein_id=WP_186799093.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	pseudogene	21095	22234	.	-	.	ID=gene-C9F04_RS24145;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=pseudogene;locus_tag=C9F04_RS24145;old_locus_tag=C9F04_24955;pseudo=true
NZ_PYKF01000773.1	Protein Homology	CDS	21095	22234	.	-	0	ID=cds-C9F04_RS24145;Parent=gene-C9F04_RS24145;Note=internal stop;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9F04_RS24145;product=molecular chaperone DnaJ;pseudo=true;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	22320	24236	.	-	.	ID=gene-C9F04_RS24150;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9F04_RS24150;old_locus_tag=C9F04_24960
NZ_PYKF01000773.1	Protein Homology	CDS	22320	24236	.	-	0	ID=cds-WP_146713282.1;Parent=gene-C9F04_RS24150;Dbxref=Genbank:WP_146713282.1;Name=WP_146713282.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F04_RS24150;product=molecular chaperone DnaK;protein_id=WP_146713282.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	24584	24988	.	+	.	ID=gene-C9F04_RS24155;Name=C9F04_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24155;old_locus_tag=C9F04_24965
NZ_PYKF01000773.1	Protein Homology	CDS	24584	24988	.	+	0	ID=cds-WP_001258086.1;Parent=gene-C9F04_RS24155;Dbxref=Genbank:WP_001258086.1;Name=WP_001258086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9F04_RS24155;product=DUF2541 family protein;protein_id=WP_001258086.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	25024	25737	.	+	.	ID=gene-C9F04_RS24160;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9F04_RS24160;old_locus_tag=C9F04_24970
NZ_PYKF01000773.1	Protein Homology	CDS	25024	25737	.	+	0	ID=cds-WP_001103477.1;Parent=gene-C9F04_RS24160;Dbxref=Genbank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9F04_RS24160;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	25887	26453	.	+	.	ID=gene-C9F04_RS24165;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9F04_RS24165;old_locus_tag=C9F04_24975
NZ_PYKF01000773.1	Protein Homology	CDS	25887	26453	.	+	0	ID=cds-WP_000528525.1;Parent=gene-C9F04_RS24165;Dbxref=Genbank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016021;gbkey=CDS;gene=satP;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9F04_RS24165;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	26510	27100	.	-	.	ID=gene-C9F04_RS24170;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9F04_RS24170;old_locus_tag=C9F04_24980
NZ_PYKF01000773.1	Protein Homology	CDS	26510	27100	.	-	0	ID=cds-WP_146713283.1;Parent=gene-C9F04_RS24170;Dbxref=Genbank:WP_146713283.1;Name=WP_146713283.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9F04_RS24170;product=molybdopterin adenylyltransferase;protein_id=WP_146713283.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	27211	28164	.	-	.	ID=gene-C9F04_RS24175;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F04_RS24175;old_locus_tag=C9F04_24985
NZ_PYKF01000773.1	Protein Homology	CDS	27211	28164	.	-	0	ID=cds-WP_000130175.1;Parent=gene-C9F04_RS24175;Dbxref=Genbank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9F04_RS24175;product=transaldolase;protein_id=WP_000130175.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	28433	29863	.	+	.	ID=gene-C9F04_RS24180;Name=C9F04_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24180;old_locus_tag=C9F04_24990
NZ_PYKF01000773.1	Protein Homology	CDS	28433	29863	.	+	0	ID=cds-WP_050068120.1;Parent=gene-C9F04_RS24180;Dbxref=Genbank:WP_050068120.1;Name=WP_050068120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9F04_RS24180;product=sodium:alanine symporter family protein;protein_id=WP_050068120.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	gene	29942	30715	.	+	.	ID=gene-C9F04_RS24185;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9F04_RS24185;old_locus_tag=C9F04_24995
NZ_PYKF01000773.1	Protein Homology	CDS	29942	30715	.	+	0	ID=cds-WP_000906175.1;Parent=gene-C9F04_RS24185;Dbxref=Genbank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9F04_RS24185;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11
NZ_PYKF01000773.1	RefSeq	pseudogene	30809	31030	.	-	.	ID=gene-C9F04_RS24190;Name=C9F04_RS24190;end_range=31030,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24190;old_locus_tag=C9F04_25000;partial=true;pseudo=true
NZ_PYKF01000773.1	Protein Homology	CDS	30809	31030	.	-	0	ID=cds-C9F04_RS24190;Parent=gene-C9F04_RS24190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=31030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F04_RS24190;partial=true;product=threonine synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000686.1 1 284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000686.1	RefSeq	region	1	284	.	+	.	ID=NZ_PYKF01000686.1:1..284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000686.1	RefSeq	pseudogene	1	284	.	-	.	ID=gene-C9F04_RS21190;Name=flgL;end_range=284,.;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=C9F04_RS21190;old_locus_tag=C9F04_21880;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000686.1	Protein Homology	CDS	1	284	.	-	1	ID=cds-C9F04_RS21190;Parent=gene-C9F04_RS21190;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=284,.;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9F04_RS21190;partial=true;product=flagellar hook-associated protein FlgL;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000076.1 1 283
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000076.1	RefSeq	region	1	283	.	+	.	ID=NZ_PYKF01000076.1:1..283;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000076.1	RefSeq	pseudogene	10	283	.	-	.	ID=gene-C9F04_RS01525;Name=C9F04_RS01525;end_range=283,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01525;old_locus_tag=C9F04_01595;partial=true;pseudo=true
NZ_PYKF01000076.1	Protein Homology	CDS	10	283	.	-	1	ID=cds-C9F04_RS01525;Parent=gene-C9F04_RS01525;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9F04_RS01525;partial=true;product=Ter macrodomain-binding protein MatP;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000124.1 1 282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000124.1	RefSeq	region	1	282	.	+	.	ID=NZ_PYKF01000124.1:1..282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000124.1	RefSeq	pseudogene	1	115	.	-	.	ID=gene-C9F04_RS02425;Name=C9F04_RS02425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02425;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000124.1	Protein Homology	CDS	1	115	.	-	0	ID=cds-C9F04_RS02425;Parent=gene-C9F04_RS02425;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=C9F04_RS02425;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000334.1 1 282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000334.1	RefSeq	region	1	282	.	+	.	ID=NZ_PYKF01000334.1:1..282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000334.1	RefSeq	gene	1	282	.	-	.	ID=gene-C9F04_RS09765;Name=C9F04_RS09765;end_range=282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09765;old_locus_tag=C9F04_10075;partial=true;start_range=.,1
NZ_PYKF01000334.1	Protein Homology	CDS	1	282	.	-	2	ID=cds-WP_146712567.1;Parent=gene-C9F04_RS09765;Dbxref=Genbank:WP_146712567.1;Name=WP_146712567.1;end_range=282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694646.1;locus_tag=C9F04_RS09765;partial=true;product=KDGP aldolase;protein_id=WP_146712567.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000701.1 1 278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000701.1	RefSeq	region	1	278	.	+	.	ID=NZ_PYKF01000701.1:1..278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000701.1	RefSeq	pseudogene	1	278	.	-	.	ID=gene-C9F04_RS21820;Name=C9F04_RS21820;end_range=278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21820;old_locus_tag=C9F04_22550;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000701.1	GeneMarkS-2+	CDS	1	278	.	-	0	ID=cds-C9F04_RS21820;Parent=gene-C9F04_RS21820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=278,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS21820;partial=true;product=electron transport complex subunit RsxC;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000081.1 1 277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000081.1	RefSeq	region	1	277	.	+	.	ID=NZ_PYKF01000081.1:1..277;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000081.1	RefSeq	pseudogene	1	215	.	+	.	ID=gene-C9F04_RS01620;Name=C9F04_RS01620;end_range=215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01620;old_locus_tag=C9F04_01690;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000081.1	Protein Homology	CDS	1	215	.	+	2	ID=cds-C9F04_RS01620;Parent=gene-C9F04_RS01620;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=215,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322237.1;locus_tag=C9F04_RS01620;partial=true;product=dimethyl sulfoxide reductase subunit B;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000241.1 1 275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000241.1	RefSeq	region	1	275	.	+	.	ID=NZ_PYKF01000241.1:1..275;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000241.1	RefSeq	pseudogene	48	221	.	-	.	ID=gene-C9F04_RS06490;Name=C9F04_RS06490;end_range=221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS06490;old_locus_tag=C9F04_06690;partial=true;pseudo=true;start_range=.,48
NZ_PYKF01000241.1	Protein Homology	CDS	48	221	.	-	0	ID=cds-C9F04_RS06490;Parent=gene-C9F04_RS06490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9F04_RS06490;partial=true;product=methylated-DNA--protein-cysteine methyltransferase;pseudo=true;start_range=.,48;transl_table=11
##sequence-region NZ_PYKF01000218.1 1 275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000218.1	RefSeq	region	1	275	.	+	.	ID=NZ_PYKF01000218.1:1..275;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000218.1	RefSeq	pseudogene	1	176	.	+	.	ID=gene-C9F04_RS26925;Name=C9F04_RS26925;end_range=176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26925;old_locus_tag=C9F04_05605;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000218.1	Protein Homology	CDS	1	176	.	+	2	ID=cds-C9F04_RS26925;Parent=gene-C9F04_RS26925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011788479.1;locus_tag=C9F04_RS26925;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000009.1 1 274
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000009.1	RefSeq	region	1	274	.	+	.	ID=NZ_PYKF01000009.1:1..274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000009.1	RefSeq	gene	1	274	.	-	.	ID=gene-C9F04_RS00085;Name=C9F04_RS00085;end_range=274,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00085;old_locus_tag=C9F04_00100;partial=true;start_range=.,1
NZ_PYKF01000009.1	Protein Homology	CDS	1	274	.	-	2	ID=cds-WP_186798971.1;Parent=gene-C9F04_RS00085;Dbxref=Genbank:WP_186798971.1;Name=WP_186798971.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;end_range=274,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F04_RS00085;partial=true;product=cation:proton antiporter;protein_id=WP_186798971.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000439.1 1 274
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000439.1	RefSeq	region	1	274	.	+	.	ID=NZ_PYKF01000439.1:1..274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000439.1	RefSeq	pseudogene	1	274	.	-	.	ID=gene-C9F04_RS13200;Name=C9F04_RS13200;end_range=274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS13200;old_locus_tag=C9F04_13630;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000439.1	Protein Homology	CDS	1	274	.	-	2	ID=cds-C9F04_RS13200;Parent=gene-C9F04_RS13200;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F04_RS13200;partial=true;product=DNA-3-methyladenine glycosylase 2;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000053.1 1 13947
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000053.1	RefSeq	region	1	13947	.	+	.	ID=NZ_PYKF01000053.1:1..13947;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000053.1	RefSeq	gene	1	1112	.	-	.	ID=gene-C9F04_RS00910;Name=C9F04_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00910;old_locus_tag=C9F04_00965;partial=true;start_range=.,1
NZ_PYKF01000053.1	Protein Homology	CDS	1	1112	.	-	0	ID=cds-WP_146712169.1;Parent=gene-C9F04_RS00910;Dbxref=Genbank:WP_146712169.1;Name=WP_146712169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9F04_RS00910;partial=true;product=PTS sugar transporter subunit IIC;protein_id=WP_146712169.1;start_range=.,1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	1407	2534	.	-	.	ID=gene-C9F04_RS00915;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9F04_RS00915;old_locus_tag=C9F04_00970
NZ_PYKF01000053.1	Protein Homology	CDS	1407	2534	.	-	0	ID=cds-WP_146712170.1;Parent=gene-C9F04_RS00915;Dbxref=Genbank:WP_146712170.1;Name=WP_146712170.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9F04_RS00915;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_146712170.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	2577	3050	.	-	.	ID=gene-C9F04_RS00920;Name=C9F04_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00920;old_locus_tag=C9F04_00975
NZ_PYKF01000053.1	Protein Homology	CDS	2577	3050	.	-	0	ID=cds-WP_000505788.1;Parent=gene-C9F04_RS00920;Dbxref=Genbank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9F04_RS00920;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	3124	3969	.	-	.	ID=gene-C9F04_RS00925;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9F04_RS00925;old_locus_tag=C9F04_00980
NZ_PYKF01000053.1	Protein Homology	CDS	3124	3969	.	-	0	ID=cds-WP_146712171.1;Parent=gene-C9F04_RS00925;Dbxref=Genbank:WP_146712171.1;Name=WP_146712171.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9F04_RS00925;product=putrescine ABC transporter permease PotI;protein_id=WP_146712171.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	3966	4919	.	-	.	ID=gene-C9F04_RS00930;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9F04_RS00930;old_locus_tag=C9F04_00985
NZ_PYKF01000053.1	Protein Homology	CDS	3966	4919	.	-	0	ID=cds-WP_135369346.1;Parent=gene-C9F04_RS00930;Dbxref=Genbank:WP_135369346.1;Name=WP_135369346.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9F04_RS00930;product=putrescine ABC transporter permease PotH;protein_id=WP_135369346.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	4929	6062	.	-	.	ID=gene-C9F04_RS00935;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9F04_RS00935;old_locus_tag=C9F04_00990
NZ_PYKF01000053.1	Protein Homology	CDS	4929	6062	.	-	0	ID=cds-WP_001000698.1;Parent=gene-C9F04_RS00935;Dbxref=Genbank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9F04_RS00935;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	6150	7262	.	-	.	ID=gene-C9F04_RS00940;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9F04_RS00940;old_locus_tag=C9F04_00995
NZ_PYKF01000053.1	Protein Homology	CDS	6150	7262	.	-	0	ID=cds-WP_135369351.1;Parent=gene-C9F04_RS00940;Dbxref=Genbank:WP_135369351.1;Name=WP_135369351.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9F04_RS00940;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_135369351.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	7611	8087	.	-	.	ID=gene-C9F04_RS00945;Name=C9F04_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00945;old_locus_tag=C9F04_01000
NZ_PYKF01000053.1	Protein Homology	CDS	7611	8087	.	-	0	ID=cds-WP_001578844.1;Parent=gene-C9F04_RS00945;Dbxref=Genbank:WP_001578844.1;Name=WP_001578844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9F04_RS00945;product=YbjN domain-containing protein;protein_id=WP_001578844.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	8183	9085	.	-	.	ID=gene-C9F04_RS00950;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9F04_RS00950;old_locus_tag=C9F04_01005
NZ_PYKF01000053.1	Protein Homology	CDS	8183	9085	.	-	0	ID=cds-WP_000684361.1;Parent=gene-C9F04_RS00950;Dbxref=Genbank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9F04_RS00950;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	9143	9865	.	-	.	ID=gene-C9F04_RS00955;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9F04_RS00955;old_locus_tag=C9F04_01010
NZ_PYKF01000053.1	Protein Homology	CDS	9143	9865	.	-	0	ID=cds-WP_000075300.1;Parent=gene-C9F04_RS00955;Dbxref=Genbank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9F04_RS00955;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	9849	10139	.	-	.	ID=gene-C9F04_RS00960;Name=C9F04_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00960;old_locus_tag=C9F04_01015
NZ_PYKF01000053.1	Protein Homology	CDS	9849	10139	.	-	0	ID=cds-WP_001259137.1;Parent=gene-C9F04_RS00960;Dbxref=Genbank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9F04_RS00960;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	10309	10572	.	+	.	ID=gene-C9F04_RS00965;Name=C9F04_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00965;old_locus_tag=C9F04_01020
NZ_PYKF01000053.1	Protein Homology	CDS	10309	10572	.	+	0	ID=cds-WP_000495513.1;Parent=gene-C9F04_RS00965;Dbxref=Genbank:WP_000495513.1;Name=WP_000495513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9F04_RS00965;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	10604	10981	.	-	.	ID=gene-C9F04_RS00970;Name=C9F04_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00970;old_locus_tag=C9F04_01025
NZ_PYKF01000053.1	Protein Homology	CDS	10604	10981	.	-	0	ID=cds-WP_000680850.1;Parent=gene-C9F04_RS00970;Dbxref=Genbank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9F04_RS00970;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	11252	12937	.	+	.	ID=gene-C9F04_RS00975;Name=C9F04_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00975;old_locus_tag=C9F04_01035
NZ_PYKF01000053.1	Protein Homology	CDS	11252	12937	.	+	0	ID=cds-WP_146712172.1;Parent=gene-C9F04_RS00975;Dbxref=Genbank:WP_146712172.1;Name=WP_146712172.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9F04_RS00975;product=aspartate:alanine antiporter;protein_id=WP_146712172.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	13054	13674	.	-	.	ID=gene-C9F04_RS00985;Name=C9F04_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00985;old_locus_tag=C9F04_01045
NZ_PYKF01000053.1	Protein Homology	CDS	13054	13674	.	-	0	ID=cds-WP_000661870.1;Parent=gene-C9F04_RS00985;Dbxref=Genbank:WP_000661870.1;Name=WP_000661870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=C9F04_RS00985;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661870.1;transl_table=11
NZ_PYKF01000053.1	RefSeq	gene	13842	13947	.	+	.	ID=gene-C9F04_RS26855;Name=C9F04_RS26855;end_range=13947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26855;old_locus_tag=C9F04_01050;partial=true
NZ_PYKF01000053.1	Protein Homology	CDS	13842	13947	.	+	0	ID=cds-WP_261770726.1;Parent=gene-C9F04_RS26855;Dbxref=Genbank:WP_261770726.1;Name=WP_261770726.1;end_range=13947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F04_RS26855;partial=true;product=hypothetical protein;protein_id=WP_261770726.1;transl_table=11
##sequence-region NZ_PYKF01000014.1 1 271
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000014.1	RefSeq	region	1	271	.	+	.	ID=NZ_PYKF01000014.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000014.1	RefSeq	pseudogene	1	271	.	-	.	ID=gene-C9F04_RS00155;Name=C9F04_RS00155;end_range=271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00155;old_locus_tag=C9F04_00170;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000014.1	Protein Homology	CDS	1	271	.	-	0	ID=cds-C9F04_RS00155;Parent=gene-C9F04_RS00155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=C9F04_RS00155;partial=true;product=PapC/FimD family outer membrane usher protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000119.1 1 270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000119.1	RefSeq	region	1	270	.	+	.	ID=NZ_PYKF01000119.1:1..270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000119.1	RefSeq	pseudogene	37	270	.	-	.	ID=gene-C9F04_RS02285;Name=C9F04_RS02285;end_range=270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02285;old_locus_tag=C9F04_02365;partial=true;pseudo=true;start_range=.,37
NZ_PYKF01000119.1	Protein Homology	CDS	37	270	.	-	0	ID=cds-C9F04_RS02285;Parent=gene-C9F04_RS02285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F04_RS02285;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;start_range=.,37;transl_table=11
##sequence-region NZ_PYKF01000004.1 1 270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000004.1	RefSeq	region	1	270	.	+	.	ID=NZ_PYKF01000004.1:1..270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000004.1	RefSeq	gene	1	270	.	-	.	ID=gene-C9F04_RS00045;Name=C9F04_RS00045;end_range=270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00045;old_locus_tag=C9F04_00060;partial=true;start_range=.,1
NZ_PYKF01000004.1	Protein Homology	CDS	1	270	.	-	1	ID=cds-WP_146712124.1;Parent=gene-C9F04_RS00045;Dbxref=Genbank:WP_146712124.1;Name=WP_146712124.1;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F04_RS00045;partial=true;product=AsmA family protein;protein_id=WP_146712124.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000113.1 1 266
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000113.1	RefSeq	region	1	266	.	+	.	ID=NZ_PYKF01000113.1:1..266;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000113.1	RefSeq	gene	50	266	.	+	.	ID=gene-C9F04_RS02195;Name=C9F04_RS02195;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02195;old_locus_tag=C9F04_02275;partial=true
NZ_PYKF01000113.1	Protein Homology	CDS	50	266	.	+	0	ID=cds-WP_186798982.1;Parent=gene-C9F04_RS02195;Dbxref=Genbank:WP_186798982.1;Name=WP_186798982.1;Ontology_term=GO:0016020;end_range=266,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F04_RS02195;partial=true;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_186798982.1;transl_table=11
##sequence-region NZ_PYKF01000178.1 1 265
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000178.1	RefSeq	region	1	265	.	+	.	ID=NZ_PYKF01000178.1:1..265;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000178.1	RefSeq	pseudogene	1	265	.	-	.	ID=gene-C9F04_RS04110;Name=C9F04_RS04110;end_range=265,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04110;old_locus_tag=C9F04_04250;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000178.1	Protein Homology	CDS	1	265	.	-	0	ID=cds-C9F04_RS04110;Parent=gene-C9F04_RS04110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F04_RS04110;partial=true;product=ssrAB-activated protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000768.1 1 265
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000768.1	RefSeq	region	1	265	.	+	.	ID=NZ_PYKF01000768.1:1..265;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000768.1	RefSeq	pseudogene	1	198	.	-	.	ID=gene-C9F04_RS23855;Name=C9F04_RS23855;end_range=198,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS23855;old_locus_tag=C9F04_24655;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000768.1	Protein Homology	CDS	1	198	.	-	0	ID=cds-C9F04_RS23855;Parent=gene-C9F04_RS23855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F04_RS23855;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000797.1 1 264
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000797.1	RefSeq	region	1	264	.	+	.	ID=NZ_PYKF01000797.1:1..264;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000797.1	RefSeq	pseudogene	52	264	.	-	.	ID=gene-C9F04_RS24820;Name=C9F04_RS24820;end_range=264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24820;old_locus_tag=C9F04_25670;partial=true;pseudo=true
NZ_PYKF01000797.1	Protein Homology	CDS	52	264	.	-	0	ID=cds-C9F04_RS24820;Parent=gene-C9F04_RS24820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9F04_RS24820;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000494.1 1 263
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000494.1	RefSeq	region	1	263	.	+	.	ID=NZ_PYKF01000494.1:1..263;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000494.1	RefSeq	pseudogene	1	263	.	+	.	ID=gene-C9F04_RS26790;Name=C9F04_RS26790;end_range=263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26790;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000494.1	Protein Homology	CDS	1	263	.	+	0	ID=cds-C9F04_RS26790;Parent=gene-C9F04_RS26790;Note=activator of the allDC-ylbA operon involved in allantoin utilization%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460164.1;locus_tag=C9F04_RS26790;partial=true;product=HTH-type transcriptional activator AllS;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000038.1 1 260
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000038.1	RefSeq	region	1	260	.	+	.	ID=NZ_PYKF01000038.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000038.1	RefSeq	gene	1	257	.	+	.	ID=gene-C9F04_RS00565;Name=C9F04_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS00565;old_locus_tag=C9F04_00600;partial=true;start_range=.,1
NZ_PYKF01000038.1	Protein Homology	CDS	1	257	.	+	2	ID=cds-WP_222591885.1;Parent=gene-C9F04_RS00565;Dbxref=Genbank:WP_222591885.1;Name=WP_222591885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=C9F04_RS00565;partial=true;product=hypothetical protein;protein_id=WP_222591885.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000289.1 1 13966
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000289.1	RefSeq	region	1	13966	.	+	.	ID=NZ_PYKF01000289.1:1..13966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000289.1	RefSeq	pseudogene	1	614	.	-	.	ID=gene-C9F04_RS08385;Name=C9F04_RS08385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS08385;old_locus_tag=C9F04_08660;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000289.1	Protein Homology	CDS	1	614	.	-	0	ID=cds-C9F04_RS08385;Parent=gene-C9F04_RS08385;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9F04_RS08385;partial=true;product=ribonuclease R;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	652	1077	.	-	.	ID=gene-C9F04_RS08390;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9F04_RS08390;old_locus_tag=C9F04_08665
NZ_PYKF01000289.1	Protein Homology	CDS	652	1077	.	-	0	ID=cds-WP_001177632.1;Parent=gene-C9F04_RS08390;Dbxref=Genbank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9F04_RS08390;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	1292	2590	.	-	.	ID=gene-C9F04_RS08395;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9F04_RS08395;old_locus_tag=C9F04_08670
NZ_PYKF01000289.1	Protein Homology	CDS	1292	2590	.	-	0	ID=cds-WP_000527960.1;Parent=gene-C9F04_RS08395;Dbxref=Genbank:WP_000527960.1;Name=WP_000527960.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9F04_RS08395;product=adenylosuccinate synthase;protein_id=WP_000527960.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	2693	2890	.	-	.	ID=gene-C9F04_RS08400;Name=C9F04_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS08400;old_locus_tag=C9F04_08675
NZ_PYKF01000289.1	Protein Homology	CDS	2693	2890	.	-	0	ID=cds-WP_001089290.1;Parent=gene-C9F04_RS08400;Dbxref=Genbank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9F04_RS08400;product=DUF2065 family protein;protein_id=WP_001089290.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	2969	3973	.	-	.	ID=gene-C9F04_RS08405;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9F04_RS08405;old_locus_tag=C9F04_08680
NZ_PYKF01000289.1	Protein Homology	CDS	2969	3973	.	-	0	ID=cds-WP_001232417.1;Parent=gene-C9F04_RS08405;Dbxref=Genbank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9F04_RS08405;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	3976	5235	.	-	.	ID=gene-C9F04_RS08410;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9F04_RS08410;old_locus_tag=C9F04_08685
NZ_PYKF01000289.1	Protein Homology	CDS	3976	5235	.	-	0	ID=cds-WP_000312505.1;Parent=gene-C9F04_RS08410;Dbxref=Genbank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016021;gbkey=CDS;gene=hflK;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9F04_RS08410;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	5450	6730	.	-	.	ID=gene-C9F04_RS08415;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9F04_RS08415;old_locus_tag=C9F04_08690
NZ_PYKF01000289.1	Protein Homology	CDS	5450	6730	.	-	0	ID=cds-WP_000460338.1;Parent=gene-C9F04_RS08415;Dbxref=Genbank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9F04_RS08415;product=GTPase HflX;protein_id=WP_000460338.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	6802	7110	.	-	.	ID=gene-C9F04_RS08420;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9F04_RS08420;old_locus_tag=C9F04_08695
NZ_PYKF01000289.1	Protein Homology	CDS	6802	7110	.	-	0	ID=cds-WP_001051875.1;Parent=gene-C9F04_RS08420;Dbxref=Genbank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9F04_RS08420;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	7193	8143	.	-	.	ID=gene-C9F04_RS08425;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9F04_RS08425;old_locus_tag=C9F04_08700
NZ_PYKF01000289.1	Protein Homology	CDS	7193	8143	.	-	0	ID=cds-WP_001000734.1;Parent=gene-C9F04_RS08425;Dbxref=Genbank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9F04_RS08425;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	8136	9992	.	-	.	ID=gene-C9F04_RS08430;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=C9F04_RS08430;old_locus_tag=C9F04_08705
NZ_PYKF01000289.1	Protein Homology	CDS	8136	9992	.	-	0	ID=cds-WP_135369324.1;Parent=gene-C9F04_RS08430;Dbxref=Genbank:WP_135369324.1;Name=WP_135369324.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9F04_RS08430;product=DNA mismatch repair endonuclease MutL;protein_id=WP_135369324.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	10002	11321	.	-	.	ID=gene-C9F04_RS08435;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9F04_RS08435;old_locus_tag=C9F04_08710
NZ_PYKF01000289.1	Protein Homology	CDS	10002	11321	.	-	0	ID=cds-WP_146712499.1;Parent=gene-C9F04_RS08435;Dbxref=Genbank:WP_146712499.1;Name=WP_146712499.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9F04_RS08435;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_146712499.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	11338	11799	.	-	.	ID=gene-C9F04_RS08440;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9F04_RS08440;old_locus_tag=C9F04_08715
NZ_PYKF01000289.1	Protein Homology	CDS	11338	11799	.	-	0	ID=cds-WP_000981984.1;Parent=gene-C9F04_RS08440;Dbxref=Genbank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9F04_RS08440;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	11771	13318	.	-	.	ID=gene-C9F04_RS08445;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9F04_RS08445;old_locus_tag=C9F04_08720
NZ_PYKF01000289.1	Protein Homology	CDS	11771	13318	.	-	0	ID=cds-WP_000968675.1;Parent=gene-C9F04_RS08445;Dbxref=Genbank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9F04_RS08445;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11
NZ_PYKF01000289.1	RefSeq	gene	13317	13966	.	+	.	ID=gene-C9F04_RS08450;Name=queG;end_range=13966,.;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9F04_RS08450;old_locus_tag=C9F04_08725;partial=true
NZ_PYKF01000289.1	Protein Homology	CDS	13317	13966	.	+	0	ID=cds-WP_146712500.1;Parent=gene-C9F04_RS08450;Dbxref=Genbank:WP_146712500.1;Name=WP_146712500.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;end_range=13966,.;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9F04_RS08450;partial=true;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_146712500.1;transl_table=11
##sequence-region NZ_PYKF01000069.1 1 257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000069.1	RefSeq	region	1	257	.	+	.	ID=NZ_PYKF01000069.1:1..257;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000069.1	RefSeq	pseudogene	1	257	.	-	.	ID=gene-C9F04_RS01275;Name=C9F04_RS01275;end_range=257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01275;old_locus_tag=C9F04_01345;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000069.1	Protein Homology	CDS	1	257	.	-	2	ID=cds-C9F04_RS01275;Parent=gene-C9F04_RS01275;Note=rotamase%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9F04_RS01275;partial=true;product=peptidylprolyl isomerase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000263.1 1 257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000263.1	RefSeq	region	1	257	.	+	.	ID=NZ_PYKF01000263.1:1..257;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000263.1	RefSeq	gene	1	257	.	+	.	ID=gene-C9F04_RS26955;Name=tssK;end_range=257,.;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9F04_RS26955;partial=true;start_range=.,1
NZ_PYKF01000263.1	Protein Homology	CDS	1	257	.	+	2	ID=cds-WP_261770755.1;Parent=gene-C9F04_RS26955;Dbxref=Genbank:WP_261770755.1;Name=WP_261770755.1;end_range=257,.;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9F04_RS26955;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=WP_261770755.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000706.1 1 255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000706.1	RefSeq	region	1	255	.	+	.	ID=NZ_PYKF01000706.1:1..255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000706.1	RefSeq	pseudogene	1	255	.	-	.	ID=gene-C9F04_RS21925;Name=C9F04_RS21925;end_range=255,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21925;old_locus_tag=C9F04_22655;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000706.1	Protein Homology	CDS	1	255	.	-	2	ID=cds-C9F04_RS21925;Parent=gene-C9F04_RS21925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9F04_RS21925;partial=true;product=multidrug transporter MdfA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000064.1 1 253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000064.1	RefSeq	region	1	253	.	+	.	ID=NZ_PYKF01000064.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000064.1	RefSeq	gene	1	253	.	-	.	ID=gene-C9F04_RS01205;Name=C9F04_RS01205;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS01205;old_locus_tag=C9F04_01275;partial=true;start_range=.,1
NZ_PYKF01000064.1	Protein Homology	CDS	1	253	.	-	2	ID=cds-WP_186798976.1;Parent=gene-C9F04_RS01205;Dbxref=Genbank:WP_186798976.1;Name=WP_186798976.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;end_range=253,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915532.1;locus_tag=C9F04_RS01205;partial=true;product=cation:proton antiporter;protein_id=WP_186798976.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000126.1 1 252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000126.1	RefSeq	region	1	252	.	+	.	ID=NZ_PYKF01000126.1:1..252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000126.1	RefSeq	pseudogene	1	252	.	-	.	ID=gene-C9F04_RS02435;Name=C9F04_RS02435;end_range=252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02435;old_locus_tag=C9F04_02515;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000126.1	Protein Homology	CDS	1	252	.	-	2	ID=cds-C9F04_RS02435;Parent=gene-C9F04_RS02435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F04_RS02435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000092.1 1 251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000092.1	RefSeq	region	1	251	.	+	.	ID=NZ_PYKF01000092.1:1..251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000092.1	RefSeq	pseudogene	1	251	.	+	.	ID=gene-C9F04_RS01735;Name=C9F04_RS01735;end_range=251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01735;old_locus_tag=C9F04_01815;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000092.1	Protein Homology	CDS	1	251	.	+	2	ID=cds-C9F04_RS01735;Parent=gene-C9F04_RS01735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199336.1;locus_tag=C9F04_RS01735;partial=true;product=diol dehydratase reactivase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000152.1 1 251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000152.1	RefSeq	region	1	251	.	+	.	ID=NZ_PYKF01000152.1:1..251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000152.1	RefSeq	pseudogene	1	179	.	-	.	ID=gene-C9F04_RS03185;Name=C9F04_RS03185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03185;old_locus_tag=C9F04_03285;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000152.1	Protein Homology	CDS	1	179	.	-	0	ID=cds-C9F04_RS03185;Parent=gene-C9F04_RS03185;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9F04_RS03185;partial=true;product=putative adenosine monophosphate-protein transferase Fic;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000152.1	RefSeq	pseudogene	172	251	.	-	.	ID=gene-C9F04_RS26890;Name=C9F04_RS26890;end_range=251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26890;partial=true;pseudo=true;start_range=.,172
NZ_PYKF01000152.1	Protein Homology	CDS	172	251	.	-	2	ID=cds-C9F04_RS26890;Parent=gene-C9F04_RS26890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9F04_RS26890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,172;transl_table=11
##sequence-region NZ_PYKF01000483.1 1 13818
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000483.1	RefSeq	region	1	13818	.	+	.	ID=NZ_PYKF01000483.1:1..13818;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000483.1	RefSeq	gene	1	369	.	-	.	ID=gene-C9F04_RS14440;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9F04_RS14440;old_locus_tag=C9F04_14910;partial=true;start_range=.,1
NZ_PYKF01000483.1	Protein Homology	CDS	1	369	.	-	0	ID=cds-WP_146712798.1;Parent=gene-C9F04_RS14440;Dbxref=Genbank:WP_146712798.1;Name=WP_146712798.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9F04_RS14440;partial=true;product=30S ribosomal protein S4;protein_id=WP_146712798.1;start_range=.,1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	403	792	.	-	.	ID=gene-C9F04_RS14445;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9F04_RS14445;old_locus_tag=C9F04_14915
NZ_PYKF01000483.1	Protein Homology	CDS	403	792	.	-	0	ID=cds-WP_001029758.1;Parent=gene-C9F04_RS14445;Dbxref=Genbank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9F04_RS14445;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	809	1165	.	-	.	ID=gene-C9F04_RS14450;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9F04_RS14450;old_locus_tag=C9F04_14920
NZ_PYKF01000483.1	Protein Homology	CDS	809	1165	.	-	0	ID=cds-WP_000090780.1;Parent=gene-C9F04_RS14450;Dbxref=Genbank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9F04_RS14450;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	1312	1428	.	-	.	ID=gene-C9F04_RS14455;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9F04_RS14455;old_locus_tag=C9F04_14925
NZ_PYKF01000483.1	Protein Homology	CDS	1312	1428	.	-	0	ID=cds-WP_000868187.1;Parent=gene-C9F04_RS14455;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9F04_RS14455;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	1460	2791	.	-	.	ID=gene-C9F04_RS14460;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9F04_RS14460;old_locus_tag=C9F04_14930
NZ_PYKF01000483.1	Protein Homology	CDS	1460	2791	.	-	0	ID=cds-WP_001118864.1;Parent=gene-C9F04_RS14460;Dbxref=Genbank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9F04_RS14460;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	2799	3233	.	-	.	ID=gene-C9F04_RS14465;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9F04_RS14465;old_locus_tag=C9F04_14935
NZ_PYKF01000483.1	Protein Homology	CDS	2799	3233	.	-	0	ID=cds-WP_001238917.1;Parent=gene-C9F04_RS14465;Dbxref=Genbank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9F04_RS14465;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	3237	3416	.	-	.	ID=gene-C9F04_RS14470;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9F04_RS14470;old_locus_tag=C9F04_14940
NZ_PYKF01000483.1	Protein Homology	CDS	3237	3416	.	-	0	ID=cds-WP_001140434.1;Parent=gene-C9F04_RS14470;Dbxref=Genbank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9F04_RS14470;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	3420	3923	.	-	.	ID=gene-C9F04_RS14475;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9F04_RS14475;old_locus_tag=C9F04_14945
NZ_PYKF01000483.1	Protein Homology	CDS	3420	3923	.	-	0	ID=cds-WP_000940121.1;Parent=gene-C9F04_RS14475;Dbxref=Genbank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9F04_RS14475;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	3938	4291	.	-	.	ID=gene-C9F04_RS14480;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9F04_RS14480;old_locus_tag=C9F04_14950
NZ_PYKF01000483.1	Protein Homology	CDS	3938	4291	.	-	0	ID=cds-WP_000358956.1;Parent=gene-C9F04_RS14480;Dbxref=Genbank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9F04_RS14480;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	4301	4834	.	-	.	ID=gene-C9F04_RS14485;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9F04_RS14485;old_locus_tag=C9F04_14955
NZ_PYKF01000483.1	Protein Homology	CDS	4301	4834	.	-	0	ID=cds-WP_000091939.1;Parent=gene-C9F04_RS14485;Dbxref=Genbank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9F04_RS14485;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	4847	5239	.	-	.	ID=gene-C9F04_RS14490;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9F04_RS14490;old_locus_tag=C9F04_14960
NZ_PYKF01000483.1	Protein Homology	CDS	4847	5239	.	-	0	ID=cds-WP_000062611.1;Parent=gene-C9F04_RS14490;Dbxref=Genbank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9F04_RS14490;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	5273	5578	.	-	.	ID=gene-C9F04_RS14495;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9F04_RS14495;old_locus_tag=C9F04_14965
NZ_PYKF01000483.1	Protein Homology	CDS	5273	5578	.	-	0	ID=cds-WP_001118932.1;Parent=gene-C9F04_RS14495;Dbxref=Genbank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9F04_RS14495;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	5593	6132	.	-	.	ID=gene-C9F04_RS14500;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9F04_RS14500;old_locus_tag=C9F04_14970
NZ_PYKF01000483.1	Protein Homology	CDS	5593	6132	.	-	0	ID=cds-WP_001096206.1;Parent=gene-C9F04_RS14500;Dbxref=Genbank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9F04_RS14500;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	6147	6461	.	-	.	ID=gene-C9F04_RS14505;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9F04_RS14505;old_locus_tag=C9F04_14975
NZ_PYKF01000483.1	Protein Homology	CDS	6147	6461	.	-	0	ID=cds-WP_000729185.1;Parent=gene-C9F04_RS14505;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9F04_RS14505;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	6472	6843	.	-	.	ID=gene-C9F04_RS14510;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9F04_RS14510;old_locus_tag=C9F04_14980
NZ_PYKF01000483.1	Protein Homology	CDS	6472	6843	.	-	0	ID=cds-WP_000613954.1;Parent=gene-C9F04_RS14510;Dbxref=Genbank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9F04_RS14510;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	7007	7261	.	-	.	ID=gene-C9F04_RS14515;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9F04_RS14515;old_locus_tag=C9F04_14985
NZ_PYKF01000483.1	Protein Homology	CDS	7007	7261	.	-	0	ID=cds-WP_000130101.1;Parent=gene-C9F04_RS14515;Dbxref=Genbank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9F04_RS14515;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	7261	7452	.	-	.	ID=gene-C9F04_RS14520;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9F04_RS14520;old_locus_tag=C9F04_14990
NZ_PYKF01000483.1	Protein Homology	CDS	7261	7452	.	-	0	ID=cds-WP_000644742.1;Parent=gene-C9F04_RS14520;Dbxref=Genbank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9F04_RS14520;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	7452	7862	.	-	.	ID=gene-C9F04_RS14525;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9F04_RS14525;old_locus_tag=C9F04_14995
NZ_PYKF01000483.1	Protein Homology	CDS	7452	7862	.	-	0	ID=cds-WP_000941208.1;Parent=gene-C9F04_RS14525;Dbxref=Genbank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9F04_RS14525;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	7875	8576	.	-	.	ID=gene-C9F04_RS14530;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9F04_RS14530;old_locus_tag=C9F04_15000
NZ_PYKF01000483.1	Protein Homology	CDS	7875	8576	.	-	0	ID=cds-WP_000529945.1;Parent=gene-C9F04_RS14530;Dbxref=Genbank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9F04_RS14530;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	8594	8926	.	-	.	ID=gene-C9F04_RS14535;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9F04_RS14535;old_locus_tag=C9F04_15005
NZ_PYKF01000483.1	Protein Homology	CDS	8594	8926	.	-	0	ID=cds-WP_000447529.1;Parent=gene-C9F04_RS14535;Dbxref=Genbank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9F04_RS14535;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	8941	9219	.	-	.	ID=gene-C9F04_RS14540;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9F04_RS14540;old_locus_tag=C9F04_15010
NZ_PYKF01000483.1	Protein Homology	CDS	8941	9219	.	-	0	ID=cds-WP_146712799.1;Parent=gene-C9F04_RS14540;Dbxref=Genbank:WP_146712799.1;Name=WP_146712799.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9F04_RS14540;product=30S ribosomal protein S19;protein_id=WP_146712799.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	9236	10057	.	-	.	ID=gene-C9F04_RS14545;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9F04_RS14545;old_locus_tag=C9F04_15015
NZ_PYKF01000483.1	Protein Homology	CDS	9236	10057	.	-	0	ID=cds-WP_000301869.1;Parent=gene-C9F04_RS14545;Dbxref=Genbank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9F04_RS14545;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	10075	10377	.	-	.	ID=gene-C9F04_RS14550;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9F04_RS14550;old_locus_tag=C9F04_15020
NZ_PYKF01000483.1	Protein Homology	CDS	10075	10377	.	-	0	ID=cds-WP_146712800.1;Parent=gene-C9F04_RS14550;Dbxref=Genbank:WP_146712800.1;Name=WP_146712800.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9F04_RS14550;product=50S ribosomal protein L23;protein_id=WP_146712800.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	10374	10979	.	-	.	ID=gene-C9F04_RS14555;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9F04_RS14555;old_locus_tag=C9F04_15025
NZ_PYKF01000483.1	Protein Homology	CDS	10374	10979	.	-	0	ID=cds-WP_000424395.1;Parent=gene-C9F04_RS14555;Dbxref=Genbank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9F04_RS14555;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	pseudogene	10990	11619	.	-	.	ID=gene-C9F04_RS14560;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=pseudogene;locus_tag=C9F04_RS14560;old_locus_tag=C9F04_15030;pseudo=true
NZ_PYKF01000483.1	Protein Homology	CDS	10990	11619	.	-	0	ID=cds-C9F04_RS14560;Parent=gene-C9F04_RS14560;Note=internal stop;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9F04_RS14560;product=50S ribosomal protein L3;pseudo=true;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	11652	11963	.	-	.	ID=gene-C9F04_RS14565;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9F04_RS14565;old_locus_tag=C9F04_15035
NZ_PYKF01000483.1	Protein Homology	CDS	11652	11963	.	-	0	ID=cds-WP_001181005.1;Parent=gene-C9F04_RS14565;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9F04_RS14565;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	12343	12810	.	+	.	ID=gene-C9F04_RS14570;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9F04_RS14570;old_locus_tag=C9F04_15045
NZ_PYKF01000483.1	Protein Homology	CDS	12343	12810	.	+	0	ID=cds-WP_135369090.1;Parent=gene-C9F04_RS14570;Dbxref=Genbank:WP_135369090.1;Name=WP_135369090.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9F04_RS14570;product=A24 family peptidase;protein_id=WP_135369090.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	12807	13283	.	-	.	ID=gene-C9F04_RS14575;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9F04_RS14575;old_locus_tag=C9F04_15050
NZ_PYKF01000483.1	Protein Homology	CDS	12807	13283	.	-	0	ID=cds-WP_000675530.1;Parent=gene-C9F04_RS14575;Dbxref=Genbank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9F04_RS14575;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	13356	13550	.	-	.	ID=gene-C9F04_RS14580;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9F04_RS14580;old_locus_tag=C9F04_15055
NZ_PYKF01000483.1	Protein Homology	CDS	13356	13550	.	-	0	ID=cds-WP_000289082.1;Parent=gene-C9F04_RS14580;Dbxref=Genbank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9F04_RS14580;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11
NZ_PYKF01000483.1	RefSeq	gene	13735	13818	.	-	.	ID=gene-C9F04_RS14585;Name=C9F04_RS14585;end_range=13818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS14585;old_locus_tag=C9F04_15070;partial=true
NZ_PYKF01000483.1	Protein Homology	CDS	13735	13818	.	-	0	ID=cds-WP_000740160.1-2;Parent=gene-C9F04_RS14585;Dbxref=Genbank:WP_000740160.1;Name=WP_000740160.1;end_range=13818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F04_RS14585;partial=true;product=hypothetical protein;protein_id=WP_000740160.1;transl_table=11
##sequence-region NZ_PYKF01000025.1 1 250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000025.1	RefSeq	region	1	250	.	+	.	ID=NZ_PYKF01000025.1:1..250;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000025.1	RefSeq	pseudogene	1	250	.	-	.	ID=gene-C9F04_RS00355;Name=C9F04_RS00355;end_range=250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00355;old_locus_tag=C9F04_00385;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000025.1	Protein Homology	CDS	1	250	.	-	0	ID=cds-C9F04_RS00355;Parent=gene-C9F04_RS00355;Note=transport system that facilitates potassium-efflux%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134120.1;locus_tag=C9F04_RS00355;partial=true;product=glutathione-regulated potassium-efflux system protein KefC;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000515.1 1 250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000515.1	RefSeq	region	1	250	.	+	.	ID=NZ_PYKF01000515.1:1..250;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000515.1	RefSeq	pseudogene	1	250	.	+	.	ID=gene-C9F04_RS26795;Name=C9F04_RS26795;end_range=250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26795;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000515.1	Protein Homology	CDS	1	250	.	+	1	ID=cds-C9F04_RS26795;Parent=gene-C9F04_RS26795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957188.1;locus_tag=C9F04_RS26795;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000335.1 1 247
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000335.1	RefSeq	region	1	247	.	+	.	ID=NZ_PYKF01000335.1:1..247;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000335.1	RefSeq	gene	1	247	.	+	.	ID=gene-C9F04_RS09770;Name=C9F04_RS09770;end_range=247,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F04_RS09770;old_locus_tag=C9F04_10080;partial=true;start_range=.,1
NZ_PYKF01000335.1	cmsearch	rRNA	1	247	.	+	.	ID=rna-C9F04_RS09770;Parent=gene-C9F04_RS09770;Dbxref=RFAM:RF02541;end_range=247,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS09770;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKF01000335.1	cmsearch	exon	1	247	.	+	.	ID=exon-C9F04_RS09770-1;Parent=rna-C9F04_RS09770;Dbxref=RFAM:RF02541;end_range=247,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS09770;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKF01000274.1 1 246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000274.1	RefSeq	region	1	246	.	+	.	ID=NZ_PYKF01000274.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000274.1	RefSeq	pseudogene	1	246	.	+	.	ID=gene-C9F04_RS07570;Name=C9F04_RS07570;end_range=246,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS07570;old_locus_tag=C9F04_07815;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000274.1	Protein Homology	CDS	1	246	.	+	0	ID=cds-C9F04_RS07570;Parent=gene-C9F04_RS07570;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0004222;end_range=246,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462495.1;locus_tag=C9F04_RS07570;partial=true;product=M3 family metallopeptidase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000602.1 1 246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000602.1	RefSeq	region	1	246	.	+	.	ID=NZ_PYKF01000602.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000602.1	RefSeq	pseudogene	1	246	.	+	.	ID=gene-C9F04_RS18010;Name=C9F04_RS18010;end_range=246,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS18010;old_locus_tag=C9F04_18580;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000602.1	Protein Homology	CDS	1	246	.	+	2	ID=cds-C9F04_RS18010;Parent=gene-C9F04_RS18010;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312084.2;locus_tag=C9F04_RS18010;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000490.1 1 245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000490.1	RefSeq	region	1	245	.	+	.	ID=NZ_PYKF01000490.1:1..245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000490.1	RefSeq	pseudogene	1	245	.	-	.	ID=gene-C9F04_RS14640;Name=C9F04_RS14640;end_range=245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS14640;old_locus_tag=C9F04_15125;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000490.1	Protein Homology	CDS	1	245	.	-	2	ID=cds-C9F04_RS14640;Parent=gene-C9F04_RS14640;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=C9F04_RS14640;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000842.1 1 243
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000842.1	RefSeq	region	1	243	.	+	.	ID=NZ_PYKF01000842.1:1..243;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000842.1	RefSeq	pseudogene	1	186	.	+	.	ID=gene-C9F04_RS26500;Name=C9F04_RS26500;end_range=186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26500;old_locus_tag=C9F04_27415;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000842.1	Protein Homology	CDS	1	186	.	+	0	ID=cds-C9F04_RS26500;Parent=gene-C9F04_RS26500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F04_RS26500;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000108.1 1 13716
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000108.1	RefSeq	region	1	13716	.	+	.	ID=NZ_PYKF01000108.1:1..13716;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000108.1	RefSeq	gene	179	283	.	+	.	ID=gene-C9F04_RS02095;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9F04_RS02095
NZ_PYKF01000108.1	Protein Homology	CDS	179	283	.	+	0	ID=cds-WP_015632840.1;Parent=gene-C9F04_RS02095;Dbxref=Genbank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9F04_RS02095;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	663	2861	.	+	.	ID=gene-C9F04_RS02100;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9F04_RS02100;old_locus_tag=C9F04_02180
NZ_PYKF01000108.1	Protein Homology	CDS	663	2861	.	+	0	ID=cds-WP_146712223.1;Parent=gene-C9F04_RS02100;Dbxref=Genbank:WP_146712223.1;Name=WP_146712223.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9F04_RS02100;product=ornithine decarboxylase SpeF;protein_id=WP_146712223.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	2858	4177	.	+	.	ID=gene-C9F04_RS02105;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F04_RS02105;old_locus_tag=C9F04_02185
NZ_PYKF01000108.1	Protein Homology	CDS	2858	4177	.	+	0	ID=cds-WP_146712224.1;Parent=gene-C9F04_RS02105;Dbxref=Genbank:WP_146712224.1;Name=WP_146712224.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016021;gbkey=CDS;gene=potE;go_component=integral component of membrane|0016021||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9F04_RS02105;product=putrescine-ornithine antiporter;protein_id=WP_146712224.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	4242	4727	.	+	.	ID=gene-C9F04_RS02110;Name=C9F04_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02110;old_locus_tag=C9F04_02190
NZ_PYKF01000108.1	Protein Homology	CDS	4242	4727	.	+	0	ID=cds-WP_000070052.1;Parent=gene-C9F04_RS02110;Dbxref=Genbank:WP_000070052.1;Name=WP_000070052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9F04_RS02110;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070052.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	4842	6482	.	-	.	ID=gene-C9F04_RS02115;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9F04_RS02115;old_locus_tag=C9F04_02195
NZ_PYKF01000108.1	Protein Homology	CDS	4842	6482	.	-	0	ID=cds-WP_000974385.1;Parent=gene-C9F04_RS02115;Dbxref=Genbank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9F04_RS02115;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	6507	7049	.	-	.	ID=gene-C9F04_RS02120;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9F04_RS02120;old_locus_tag=C9F04_02200
NZ_PYKF01000108.1	Protein Homology	CDS	6507	7049	.	-	0	ID=cds-WP_000848395.1;Parent=gene-C9F04_RS02120;Dbxref=Genbank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9F04_RS02120;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	7234	8004	.	+	.	ID=gene-C9F04_RS02125;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9F04_RS02125;old_locus_tag=C9F04_02205
NZ_PYKF01000108.1	Protein Homology	CDS	7234	8004	.	+	0	ID=cds-WP_000773245.1;Parent=gene-C9F04_RS02125;Dbxref=Genbank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9F04_RS02125;product=esterase;protein_id=WP_000773245.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	8138	8431	.	+	.	ID=gene-C9F04_RS02130;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9F04_RS02130;old_locus_tag=C9F04_02210
NZ_PYKF01000108.1	Protein Homology	CDS	8138	8431	.	+	0	ID=cds-WP_001040939.1;Parent=gene-C9F04_RS02130;Dbxref=Genbank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9F04_RS02130;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	8582	9112	.	+	.	ID=gene-C9F04_RS02135;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9F04_RS02135;old_locus_tag=C9F04_02215
NZ_PYKF01000108.1	Protein Homology	CDS	8582	9112	.	+	0	ID=cds-WP_001018621.1;Parent=gene-C9F04_RS02135;Dbxref=Genbank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9F04_RS02135;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	pseudogene	9316	9401	.	+	.	ID=gene-C9F04_RS26750;Name=C9F04_RS26750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26750;pseudo=true
NZ_PYKF01000108.1	Protein Homology	CDS	9316	9401	.	+	0	ID=cds-C9F04_RS26750;Parent=gene-C9F04_RS26750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9F04_RS26750;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	9394	9846	.	+	.	ID=gene-C9F04_RS02140;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9F04_RS02140;old_locus_tag=C9F04_02220
NZ_PYKF01000108.1	Protein Homology	CDS	9394	9846	.	+	0	ID=cds-WP_000131699.1;Parent=gene-C9F04_RS02140;Dbxref=Genbank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9F04_RS02140;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	9961	10887	.	+	.	ID=gene-C9F04_RS02145;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9F04_RS02145;old_locus_tag=C9F04_02225
NZ_PYKF01000108.1	Protein Homology	CDS	9961	10887	.	+	0	ID=cds-WP_000423365.1;Parent=gene-C9F04_RS02145;Dbxref=Genbank:WP_000423365.1;Name=WP_000423365.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9F04_RS02145;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423365.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	10985	12388	.	+	.	ID=gene-C9F04_RS02150;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9F04_RS02150;old_locus_tag=C9F04_02230
NZ_PYKF01000108.1	Protein Homology	CDS	10985	12388	.	+	0	ID=cds-WP_146712225.1;Parent=gene-C9F04_RS02150;Dbxref=Genbank:WP_146712225.1;Name=WP_146712225.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9F04_RS02150;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_146712225.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	gene	12375	13514	.	+	.	ID=gene-C9F04_RS02155;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9F04_RS02155;old_locus_tag=C9F04_02235
NZ_PYKF01000108.1	Protein Homology	CDS	12375	13514	.	+	0	ID=cds-WP_000811134.1;Parent=gene-C9F04_RS02155;Dbxref=Genbank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9F04_RS02155;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11
NZ_PYKF01000108.1	RefSeq	pseudogene	13565	13696	.	+	.	ID=gene-C9F04_RS02160;Name=C9F04_RS02160;end_range=13696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02160;old_locus_tag=C9F04_02240;partial=true;pseudo=true
NZ_PYKF01000108.1	Protein Homology	CDS	13565	13696	.	+	0	ID=cds-C9F04_RS02160;Parent=gene-C9F04_RS02160;Note=is involved in the uptake of citrate and the transport of protons into the cell%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13696,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9F04_RS02160;partial=true;product=citrate-proton symporter;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000516.1 1 242
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000516.1	RefSeq	region	1	242	.	+	.	ID=NZ_PYKF01000516.1:1..242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000516.1	RefSeq	gene	1	242	.	+	.	ID=gene-C9F04_RS15470;Name=C9F04_RS15470;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15470;old_locus_tag=C9F04_15960;partial=true;start_range=.,1
NZ_PYKF01000516.1	Protein Homology	CDS	1	242	.	+	0	ID=cds-WP_146712845.1;Parent=gene-C9F04_RS15470;Dbxref=Genbank:WP_146712845.1;Name=WP_146712845.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507077.1;locus_tag=C9F04_RS15470;partial=true;product=Ig-like domain-containing protein;protein_id=WP_146712845.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000116.1 1 241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000116.1	RefSeq	region	1	241	.	+	.	ID=NZ_PYKF01000116.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000116.1	RefSeq	pseudogene	1	241	.	+	.	ID=gene-C9F04_RS02255;Name=C9F04_RS02255;end_range=241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02255;old_locus_tag=C9F04_02335;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000116.1	Protein Homology	CDS	1	241	.	+	2	ID=cds-C9F04_RS02255;Parent=gene-C9F04_RS02255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077771.1;locus_tag=C9F04_RS02255;partial=true;product=zinc-binding dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000214.1 1 239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000214.1	RefSeq	region	1	239	.	+	.	ID=NZ_PYKF01000214.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000214.1	RefSeq	pseudogene	1	239	.	-	.	ID=gene-C9F04_RS05345;Name=C9F04_RS05345;end_range=239,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS05345;old_locus_tag=C9F04_05520;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000214.1	Protein Homology	CDS	1	239	.	-	2	ID=cds-C9F04_RS05345;Parent=gene-C9F04_RS05345;Note=Involved in anaerobic NO protection%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F04_RS05345;partial=true;product=DNA-binding transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000027.1 1 239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000027.1	RefSeq	region	1	239	.	+	.	ID=NZ_PYKF01000027.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000027.1	RefSeq	pseudogene	1	239	.	-	.	ID=gene-C9F04_RS00375;Name=C9F04_RS00375;end_range=239,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS00375;old_locus_tag=C9F04_00405;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000027.1	Protein Homology	CDS	1	239	.	-	1	ID=cds-C9F04_RS00375;Parent=gene-C9F04_RS00375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9F04_RS00375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000082.1 1 239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000082.1	RefSeq	region	1	239	.	+	.	ID=NZ_PYKF01000082.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000082.1	RefSeq	pseudogene	1	239	.	-	.	ID=gene-C9F04_RS01625;Name=C9F04_RS01625;end_range=239,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01625;old_locus_tag=C9F04_01695;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000082.1	Protein Homology	CDS	1	239	.	-	0	ID=cds-C9F04_RS01625;Parent=gene-C9F04_RS01625;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000677007.1;locus_tag=C9F04_RS01625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000089.1 1 238
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000089.1	RefSeq	region	1	238	.	+	.	ID=NZ_PYKF01000089.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000089.1	RefSeq	pseudogene	1	190	.	+	.	ID=gene-C9F04_RS01720;Name=C9F04_RS01720;end_range=190,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01720;old_locus_tag=C9F04_01800;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000089.1	Protein Homology	CDS	1	190	.	+	1	ID=cds-C9F04_RS01720;Parent=gene-C9F04_RS01720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=190,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F04_RS01720;partial=true;product=NADH-quinone oxidoreductase subunit M;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000162.1 1 238
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000162.1	RefSeq	region	1	238	.	+	.	ID=NZ_PYKF01000162.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000162.1	RefSeq	pseudogene	1	169	.	-	.	ID=gene-C9F04_RS26895;Name=C9F04_RS26895;end_range=169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26895;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000162.1	Protein Homology	CDS	1	169	.	-	0	ID=cds-C9F04_RS26895;Parent=gene-C9F04_RS26895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9F04_RS26895;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000355.1 1 236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000355.1	RefSeq	region	1	236	.	+	.	ID=NZ_PYKF01000355.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000355.1	RefSeq	pseudogene	1	236	.	-	.	ID=gene-C9F04_RS10465;Name=C9F04_RS10465;end_range=236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS10465;old_locus_tag=C9F04_10800;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000355.1	Protein Homology	CDS	1	236	.	-	2	ID=cds-C9F04_RS10465;Parent=gene-C9F04_RS10465;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131508.1;locus_tag=C9F04_RS10465;partial=true;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000629.1 1 13699
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000629.1	RefSeq	region	1	13699	.	+	.	ID=NZ_PYKF01000629.1:1..13699;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000629.1	RefSeq	gene	1	561	.	+	.	ID=gene-C9F04_RS19070;Name=C9F04_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19070;old_locus_tag=C9F04_19695;partial=true;start_range=.,1
NZ_PYKF01000629.1	Protein Homology	CDS	1	561	.	+	0	ID=cds-WP_261771381.1;Parent=gene-C9F04_RS19070;Dbxref=Genbank:WP_261771381.1;Name=WP_261771381.1;Ontology_term=GO:0006260,GO:0032508,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001889848.1;locus_tag=C9F04_RS19070;partial=true;product=exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase;protein_id=WP_261771381.1;start_range=.,1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	663	2141	.	+	.	ID=gene-C9F04_RS19075;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9F04_RS19075;old_locus_tag=C9F04_19700
NZ_PYKF01000629.1	Protein Homology	CDS	663	2141	.	+	0	ID=cds-WP_146713021.1;Parent=gene-C9F04_RS19075;Dbxref=Genbank:WP_146713021.1;Name=WP_146713021.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9F04_RS19075;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_146713021.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	2163	3443	.	+	.	ID=gene-C9F04_RS19080;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9F04_RS19080;old_locus_tag=C9F04_19705
NZ_PYKF01000629.1	Protein Homology	CDS	2163	3443	.	+	0	ID=cds-WP_020839236.1;Parent=gene-C9F04_RS19080;Dbxref=Genbank:WP_020839236.1;Name=WP_020839236.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F04_RS19080;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_020839236.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	3440	4660	.	+	.	ID=gene-C9F04_RS19085;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9F04_RS19085;old_locus_tag=C9F04_19710
NZ_PYKF01000629.1	Protein Homology	CDS	3440	4660	.	+	0	ID=cds-WP_135369709.1;Parent=gene-C9F04_RS19085;Dbxref=Genbank:WP_135369709.1;Name=WP_135369709.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9F04_RS19085;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_135369709.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	4671	6074	.	+	.	ID=gene-C9F04_RS19090;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9F04_RS19090;old_locus_tag=C9F04_19715
NZ_PYKF01000629.1	Protein Homology	CDS	4671	6074	.	+	0	ID=cds-WP_135369710.1;Parent=gene-C9F04_RS19090;Dbxref=Genbank:WP_135369710.1;Name=WP_135369710.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9F04_RS19090;product=colanic acid biosynthesis protein WcaM;protein_id=WP_135369710.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	6252	7145	.	+	.	ID=gene-C9F04_RS19095;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9F04_RS19095;old_locus_tag=C9F04_19720
NZ_PYKF01000629.1	Protein Homology	CDS	6252	7145	.	+	0	ID=cds-WP_146713022.1;Parent=gene-C9F04_RS19095;Dbxref=Genbank:WP_146713022.1;Name=WP_146713022.1;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9F04_RS19095;product=GalU regulator GalF;protein_id=WP_146713022.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	7522	8607	.	+	.	ID=gene-C9F04_RS19100;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9F04_RS19100;old_locus_tag=C9F04_19725
NZ_PYKF01000629.1	Protein Homology	CDS	7522	8607	.	+	0	ID=cds-WP_000697846.1;Parent=gene-C9F04_RS19100;Dbxref=Genbank:WP_000697846.1;Name=WP_000697846.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=C9F04_RS19100;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	8607	9506	.	+	.	ID=gene-C9F04_RS19105;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=C9F04_RS19105;old_locus_tag=C9F04_19730
NZ_PYKF01000629.1	Protein Homology	CDS	8607	9506	.	+	0	ID=cds-WP_146713023.1;Parent=gene-C9F04_RS19105;Dbxref=Genbank:WP_146713023.1;Name=WP_146713023.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=C9F04_RS19105;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_146713023.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	9554	10432	.	+	.	ID=gene-C9F04_RS19110;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9F04_RS19110;old_locus_tag=C9F04_19735
NZ_PYKF01000629.1	Protein Homology	CDS	9554	10432	.	+	0	ID=cds-WP_000857535.1;Parent=gene-C9F04_RS19110;Dbxref=Genbank:WP_000857535.1;Name=WP_000857535.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=C9F04_RS19110;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857535.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	10433	10984	.	+	.	ID=gene-C9F04_RS19115;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=C9F04_RS19115;old_locus_tag=C9F04_19740
NZ_PYKF01000629.1	Protein Homology	CDS	10433	10984	.	+	0	ID=cds-WP_000973710.1;Parent=gene-C9F04_RS19115;Dbxref=Genbank:WP_000973710.1;Name=WP_000973710.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=C9F04_RS19115;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973710.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	10990	11982	.	+	.	ID=gene-C9F04_RS19120;Name=C9F04_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19120;old_locus_tag=C9F04_19745
NZ_PYKF01000629.1	Protein Homology	CDS	10990	11982	.	+	0	ID=cds-WP_000018226.1;Parent=gene-C9F04_RS19120;Dbxref=Genbank:WP_000018226.1;Name=WP_000018226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=C9F04_RS19120;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_000018226.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	11979	12752	.	+	.	ID=gene-C9F04_RS19125;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=C9F04_RS19125;old_locus_tag=C9F04_19750
NZ_PYKF01000629.1	Protein Homology	CDS	11979	12752	.	+	0	ID=cds-WP_000648784.1;Parent=gene-C9F04_RS19125;Dbxref=Genbank:WP_000648784.1;Name=WP_000648784.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=C9F04_RS19125;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648784.1;transl_table=11
NZ_PYKF01000629.1	RefSeq	gene	12757	13699	.	+	.	ID=gene-C9F04_RS19130;Name=rfbG;end_range=13699,.;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=C9F04_RS19130;old_locus_tag=C9F04_19755;partial=true
NZ_PYKF01000629.1	Protein Homology	CDS	12757	13699	.	+	0	ID=cds-WP_146713024.1;Parent=gene-C9F04_RS19130;Dbxref=Genbank:WP_146713024.1;Name=WP_146713024.1;Ontology_term=GO:0009243,GO:0047733;end_range=13699,.;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9F04_RS19130;partial=true;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_146713024.1;transl_table=11
##sequence-region NZ_PYKF01000110.1 1 236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000110.1	RefSeq	region	1	236	.	+	.	ID=NZ_PYKF01000110.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000110.1	RefSeq	pseudogene	1	236	.	+	.	ID=gene-C9F04_RS02175;Name=upp;end_range=236,.;gbkey=Gene;gene=upp;gene_biotype=pseudogene;locus_tag=C9F04_RS02175;old_locus_tag=C9F04_02255;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000110.1	Protein Homology	CDS	1	236	.	+	2	ID=cds-C9F04_RS02175;Parent=gene-C9F04_RS02175;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=236,.;gbkey=CDS;gene=upp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9F04_RS02175;partial=true;product=uracil phosphoribosyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000394.1 1 236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000394.1	RefSeq	region	1	236	.	+	.	ID=NZ_PYKF01000394.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
##sequence-region NZ_PYKF01000165.1 1 235
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000165.1	RefSeq	region	1	235	.	+	.	ID=NZ_PYKF01000165.1:1..235;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
##sequence-region NZ_PYKF01000525.1 1 233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000525.1	RefSeq	region	1	233	.	+	.	ID=NZ_PYKF01000525.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000525.1	RefSeq	gene	1	233	.	+	.	ID=gene-C9F04_RS15775;Name=C9F04_RS15775;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS15775;old_locus_tag=C9F04_16260;partial=true;start_range=.,1
NZ_PYKF01000525.1	Protein Homology	CDS	1	233	.	+	1	ID=cds-WP_146712856.1;Parent=gene-C9F04_RS15775;Dbxref=Genbank:WP_146712856.1;Name=WP_146712856.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F04_RS15775;partial=true;product=condensation domain-containing protein;protein_id=WP_146712856.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000058.1 1 232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000058.1	RefSeq	region	1	232	.	+	.	ID=NZ_PYKF01000058.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000058.1	RefSeq	pseudogene	1	151	.	-	.	ID=gene-C9F04_RS26745;Name=C9F04_RS26745;end_range=151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26745;old_locus_tag=C9F04_01135;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000058.1	Protein Homology	CDS	1	151	.	-	0	ID=cds-C9F04_RS26745;Parent=gene-C9F04_RS26745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=151,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F04_RS26745;partial=true;product=AsmA family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000088.1 1 232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000088.1	RefSeq	region	1	232	.	+	.	ID=NZ_PYKF01000088.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000088.1	RefSeq	pseudogene	50	232	.	+	.	ID=gene-C9F04_RS26865;Name=yajC;end_range=232,.;gbkey=Gene;gene=yajC;gene_biotype=pseudogene;locus_tag=C9F04_RS26865;old_locus_tag=C9F04_01795;partial=true;pseudo=true
NZ_PYKF01000088.1	Protein Homology	CDS	50	232	.	+	0	ID=cds-C9F04_RS26865;Parent=gene-C9F04_RS26865;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=232,.;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F04_RS26865;partial=true;product=preprotein translocase subunit YajC;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000093.1 1 231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000093.1	RefSeq	region	1	231	.	+	.	ID=NZ_PYKF01000093.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000093.1	RefSeq	pseudogene	1	231	.	-	.	ID=gene-C9F04_RS01740;Name=C9F04_RS01740;end_range=231,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01740;old_locus_tag=C9F04_01820;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000093.1	Protein Homology	CDS	1	231	.	-	0	ID=cds-C9F04_RS01740;Parent=gene-C9F04_RS01740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9F04_RS01740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000094.1 1 231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000094.1	RefSeq	region	1	231	.	+	.	ID=NZ_PYKF01000094.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000094.1	RefSeq	pseudogene	1	120	.	-	.	ID=gene-C9F04_RS01745;Name=C9F04_RS01745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS01745;old_locus_tag=C9F04_01825;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000094.1	Protein Homology	CDS	1	120	.	-	0	ID=cds-C9F04_RS01745;Parent=gene-C9F04_RS01745;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9F04_RS01745;partial=true;product=glycine cleavage system protein H;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000094.1	RefSeq	gene	146	231	.	-	.	ID=gene-C9F04_RS26870;Name=C9F04_RS26870;end_range=231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26870;old_locus_tag=C9F04_01830;partial=true
NZ_PYKF01000094.1	Protein Homology	CDS	146	231	.	-	2	ID=cds-WP_261770734.1;Parent=gene-C9F04_RS26870;Dbxref=Genbank:WP_261770734.1;Name=WP_261770734.1;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311803.1;locus_tag=C9F04_RS26870;partial=true;product=hypothetical protein;protein_id=WP_261770734.1;transl_table=11
##sequence-region NZ_PYKF01000349.1 1 229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000349.1	RefSeq	region	1	229	.	+	.	ID=NZ_PYKF01000349.1:1..229;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000349.1	RefSeq	pseudogene	1	229	.	-	.	ID=gene-C9F04_RS10295;Name=mobA;end_range=229,.;gbkey=Gene;gene=mobA;gene_biotype=pseudogene;locus_tag=C9F04_RS10295;old_locus_tag=C9F04_10625;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000349.1	Protein Homology	CDS	1	229	.	-	0	ID=cds-C9F04_RS10295;Parent=gene-C9F04_RS10295;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=229,.;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067609.1;locus_tag=C9F04_RS10295;partial=true;product=molybdenum cofactor guanylyltransferase MobA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKF01000305.1 1 13563
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000305.1	RefSeq	region	1	13563	.	+	.	ID=NZ_PYKF01000305.1:1..13563;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000305.1	RefSeq	gene	1	1257	.	-	.	ID=gene-C9F04_RS08970;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9F04_RS08970;old_locus_tag=C9F04_09270;partial=true;start_range=.,1
NZ_PYKF01000305.1	Protein Homology	CDS	1	1257	.	-	0	ID=cds-WP_146712521.1;Parent=gene-C9F04_RS08970;Dbxref=Genbank:WP_146712521.1;Name=WP_146712521.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9F04_RS08970;partial=true;product=ATPase RavA stimulator ViaA;protein_id=WP_146712521.1;start_range=.,1;transl_table=11
NZ_PYKF01000305.1	RefSeq	pseudogene	1251	2780	.	-	.	ID=gene-C9F04_RS08975;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=pseudogene;locus_tag=C9F04_RS08975;old_locus_tag=C9F04_09275;pseudo=true
NZ_PYKF01000305.1	Protein Homology	CDS	1251	2780	.	-	0	ID=cds-C9F04_RS08975;Parent=gene-C9F04_RS08975;Note=internal stop;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581599.1;locus_tag=C9F04_RS08975;product=ATPase RavA;pseudo=true;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	3095	4963	.	+	.	ID=gene-C9F04_RS08980;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9F04_RS08980;old_locus_tag=C9F04_09280
NZ_PYKF01000305.1	Protein Homology	CDS	3095	4963	.	+	0	ID=cds-WP_000102338.1;Parent=gene-C9F04_RS08980;Dbxref=Genbank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9F04_RS08980;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	5180	5599	.	+	.	ID=gene-C9F04_RS08985;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9F04_RS08985;old_locus_tag=C9F04_09285
NZ_PYKF01000305.1	Protein Homology	CDS	5180	5599	.	+	0	ID=cds-WP_000715945.1;Parent=gene-C9F04_RS08985;Dbxref=Genbank:WP_000715945.1;Name=WP_000715945.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9F04_RS08985;product=D-ribose pyranase;protein_id=WP_000715945.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	5607	7112	.	+	.	ID=gene-C9F04_RS08990;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9F04_RS08990;old_locus_tag=C9F04_09290
NZ_PYKF01000305.1	Protein Homology	CDS	5607	7112	.	+	0	ID=cds-WP_146712522.1;Parent=gene-C9F04_RS08990;Dbxref=Genbank:WP_146712522.1;Name=WP_146712522.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9F04_RS08990;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_146712522.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	7118	8083	.	+	.	ID=gene-C9F04_RS08995;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9F04_RS08995;old_locus_tag=C9F04_09295
NZ_PYKF01000305.1	Protein Homology	CDS	7118	8083	.	+	0	ID=cds-WP_000211345.1;Parent=gene-C9F04_RS08995;Dbxref=Genbank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=rbsC;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9F04_RS08995;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	8108	8998	.	+	.	ID=gene-C9F04_RS09000;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9F04_RS09000;old_locus_tag=C9F04_09300
NZ_PYKF01000305.1	Protein Homology	CDS	8108	8998	.	+	0	ID=cds-WP_001056260.1;Parent=gene-C9F04_RS09000;Dbxref=Genbank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9F04_RS09000;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	9131	10060	.	+	.	ID=gene-C9F04_RS09005;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F04_RS09005;old_locus_tag=C9F04_09305
NZ_PYKF01000305.1	Protein Homology	CDS	9131	10060	.	+	0	ID=cds-WP_000844730.1;Parent=gene-C9F04_RS09005;Dbxref=Genbank:WP_000844730.1;Name=WP_000844730.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9F04_RS09005;product=ribokinase;protein_id=WP_000844730.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	10064	11062	.	+	.	ID=gene-C9F04_RS09010;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9F04_RS09010;old_locus_tag=C9F04_09310
NZ_PYKF01000305.1	Protein Homology	CDS	10064	11062	.	+	0	ID=cds-WP_000224495.1;Parent=gene-C9F04_RS09010;Dbxref=Genbank:WP_000224495.1;Name=WP_000224495.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9F04_RS09010;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224495.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	11028	12455	.	-	.	ID=gene-C9F04_RS09015;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9F04_RS09015;old_locus_tag=C9F04_09315
NZ_PYKF01000305.1	Protein Homology	CDS	11028	12455	.	-	0	ID=cds-WP_023209035.1;Parent=gene-C9F04_RS09015;Dbxref=Genbank:WP_023209035.1;Name=WP_023209035.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mdtD;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9F04_RS09015;product=multidrug transporter subunit MdtD;protein_id=WP_023209035.1;transl_table=11
NZ_PYKF01000305.1	RefSeq	gene	12467	13171	.	-	.	ID=gene-C9F04_RS09020;Name=C9F04_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09020;old_locus_tag=C9F04_09320
NZ_PYKF01000305.1	Protein Homology	CDS	12467	13171	.	-	0	ID=cds-WP_135369091.1;Parent=gene-C9F04_RS09020;Dbxref=Genbank:WP_135369091.1;Name=WP_135369091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9F04_RS09020;product=FadR family transcriptional regulator;protein_id=WP_135369091.1;transl_table=11
##sequence-region NZ_PYKF01000005.1 1 213
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000005.1	RefSeq	region	1	213	.	+	.	ID=NZ_PYKF01000005.1:1..213;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000005.1	RefSeq	gene	3	76	.	-	.	ID=gene-C9F04_RS00050;Name=C9F04_RS00050;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS00050;old_locus_tag=C9F04_00065
NZ_PYKF01000005.1	tRNAscan-SE	tRNA	3	76	.	-	.	ID=rna-C9F04_RS00050;Parent=gene-C9F04_RS00050;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00050;product=tRNA-Arg
NZ_PYKF01000005.1	tRNAscan-SE	exon	3	76	.	-	.	ID=exon-C9F04_RS00050-1;Parent=rna-C9F04_RS00050;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS00050;product=tRNA-Arg
##sequence-region NZ_PYKF01000376.1 1 13502
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000376.1	RefSeq	region	1	13502	.	+	.	ID=NZ_PYKF01000376.1:1..13502;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000376.1	RefSeq	pseudogene	1	363	.	+	.	ID=gene-C9F04_RS11045;Name=C9F04_RS11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11045;old_locus_tag=C9F04_11405;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000376.1	Protein Homology	CDS	1	363	.	+	0	ID=cds-C9F04_RS11045;Parent=gene-C9F04_RS11045;Note=multicopy suppressor of dominant negative ftsH mutations%3B putative acyl-CoA synthetase%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9F04_RS11045;partial=true;product=acyl-CoA synthetase FdrA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	373	1632	.	+	.	ID=gene-C9F04_RS11050;Name=C9F04_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11050;old_locus_tag=C9F04_11410
NZ_PYKF01000376.1	Protein Homology	CDS	373	1632	.	+	0	ID=cds-WP_024156777.1;Parent=gene-C9F04_RS11050;Dbxref=Genbank:WP_024156777.1;Name=WP_024156777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9F04_RS11050;product=DUF1116 domain-containing protein;protein_id=WP_024156777.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	1644	2453	.	+	.	ID=gene-C9F04_RS11055;Name=C9F04_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11055;old_locus_tag=C9F04_11415
NZ_PYKF01000376.1	Protein Homology	CDS	1644	2453	.	+	0	ID=cds-WP_135369527.1;Parent=gene-C9F04_RS11055;Dbxref=Genbank:WP_135369527.1;Name=WP_135369527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9F04_RS11055;product=DUF2877 domain-containing protein;protein_id=WP_135369527.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	2457	3350	.	+	.	ID=gene-C9F04_RS11060;Name=C9F04_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11060;old_locus_tag=C9F04_11420
NZ_PYKF01000376.1	Protein Homology	CDS	2457	3350	.	+	0	ID=cds-WP_146712635.1;Parent=gene-C9F04_RS11060;Dbxref=Genbank:WP_146712635.1;Name=WP_146712635.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9F04_RS11060;product=carbamate kinase;protein_id=WP_146712635.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	3391	4458	.	-	.	ID=gene-C9F04_RS11065;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9F04_RS11065;old_locus_tag=C9F04_11425
NZ_PYKF01000376.1	Protein Homology	CDS	3391	4458	.	-	0	ID=cds-WP_146712636.1;Parent=gene-C9F04_RS11065;Dbxref=Genbank:WP_146712636.1;Name=WP_146712636.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9F04_RS11065;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_146712636.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	4455	4964	.	-	.	ID=gene-C9F04_RS11070;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9F04_RS11070;old_locus_tag=C9F04_11430
NZ_PYKF01000376.1	Protein Homology	CDS	4455	4964	.	-	0	ID=cds-WP_000098736.1;Parent=gene-C9F04_RS11070;Dbxref=Genbank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9F04_RS11070;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	5082	5804	.	-	.	ID=gene-C9F04_RS11075;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9F04_RS11075;old_locus_tag=C9F04_11440
NZ_PYKF01000376.1	Protein Homology	CDS	5082	5804	.	-	0	ID=cds-WP_000212284.1;Parent=gene-C9F04_RS11075;Dbxref=Genbank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9F04_RS11075;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	5807	6301	.	-	.	ID=gene-C9F04_RS11080;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9F04_RS11080;old_locus_tag=C9F04_11445
NZ_PYKF01000376.1	Protein Homology	CDS	5807	6301	.	-	0	ID=cds-WP_000255991.1;Parent=gene-C9F04_RS11080;Dbxref=Genbank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9F04_RS11080;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	6474	7859	.	+	.	ID=gene-C9F04_RS11085;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9F04_RS11085;old_locus_tag=C9F04_11450
NZ_PYKF01000376.1	Protein Homology	CDS	6474	7859	.	+	0	ID=cds-WP_146712637.1;Parent=gene-C9F04_RS11085;Dbxref=Genbank:WP_146712637.1;Name=WP_146712637.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9F04_RS11085;product=cysteine--tRNA ligase;protein_id=WP_146712637.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	7950	8498	.	-	.	ID=gene-C9F04_RS11090;Name=C9F04_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11090;old_locus_tag=C9F04_11455
NZ_PYKF01000376.1	Protein Homology	CDS	7950	8498	.	-	0	ID=cds-WP_134938315.1;Parent=gene-C9F04_RS11090;Dbxref=Genbank:WP_134938315.1;Name=WP_134938315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=C9F04_RS11090;product=metal-dependent hydrolase;protein_id=WP_134938315.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	8625	8837	.	-	.	ID=gene-C9F04_RS11095;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9F04_RS11095;old_locus_tag=C9F04_11460
NZ_PYKF01000376.1	Protein Homology	CDS	8625	8837	.	-	0	ID=cds-WP_000190278.1;Parent=gene-C9F04_RS11095;Dbxref=Genbank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9F04_RS11095;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	8839	9705	.	-	.	ID=gene-C9F04_RS11100;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9F04_RS11100;old_locus_tag=C9F04_11465
NZ_PYKF01000376.1	Protein Homology	CDS	8839	9705	.	-	0	ID=cds-WP_000729165.1;Parent=gene-C9F04_RS11100;Dbxref=Genbank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9F04_RS11100;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	10252	10809	.	+	.	ID=gene-C9F04_RS11110;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9F04_RS11110;old_locus_tag=C9F04_11475
NZ_PYKF01000376.1	Protein Homology	CDS	10252	10809	.	+	0	ID=cds-WP_080222818.1;Parent=gene-C9F04_RS11110;Dbxref=Genbank:WP_080222818.1;Name=WP_080222818.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9F04_RS11110;product=type 1 fimbrial protein subunit FimA;protein_id=WP_080222818.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	10884	11417	.	+	.	ID=gene-C9F04_RS11115;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9F04_RS11115;old_locus_tag=C9F04_11480
NZ_PYKF01000376.1	Protein Homology	CDS	10884	11417	.	+	0	ID=cds-WP_080110530.1;Parent=gene-C9F04_RS11115;Dbxref=Genbank:WP_080110530.1;Name=WP_080110530.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9F04_RS11115;product=type 1 fimbrial protein subunit FimI;protein_id=WP_080110530.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	11461	12153	.	+	.	ID=gene-C9F04_RS11120;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9F04_RS11120;old_locus_tag=C9F04_11485
NZ_PYKF01000376.1	Protein Homology	CDS	11461	12153	.	+	0	ID=cds-WP_001531073.1;Parent=gene-C9F04_RS11120;Dbxref=Genbank:WP_001531073.1;Name=WP_001531073.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9F04_RS11120;product=type 1 fimbria chaperone FimC;protein_id=WP_001531073.1;transl_table=11
NZ_PYKF01000376.1	RefSeq	gene	12184	13502	.	+	.	ID=gene-C9F04_RS11125;Name=C9F04_RS11125;end_range=13502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11125;old_locus_tag=C9F04_11490;partial=true
NZ_PYKF01000376.1	Protein Homology	CDS	12184	13502	.	+	0	ID=cds-WP_146712638.1;Parent=gene-C9F04_RS11125;Dbxref=Genbank:WP_146712638.1;Name=WP_146712638.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=13502,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831116.1;locus_tag=C9F04_RS11125;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_146712638.1;transl_table=11
##sequence-region NZ_PYKF01000806.1 1 13501
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000806.1	RefSeq	region	1	13501	.	+	.	ID=NZ_PYKF01000806.1:1..13501;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000806.1	RefSeq	gene	1	84	.	-	.	ID=gene-C9F04_RS27280;Name=C9F04_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS27280;partial=true;start_range=.,1
NZ_PYKF01000806.1	Protein Homology	CDS	1	84	.	-	0	ID=cds-WP_261771506.1;Parent=gene-C9F04_RS27280;Dbxref=Genbank:WP_261771506.1;Name=WP_261771506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9F04_RS27280;partial=true;product=hypothetical protein;protein_id=WP_261771506.1;start_range=.,1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	232	681	.	-	.	ID=gene-C9F04_RS25185;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9F04_RS25185;old_locus_tag=C9F04_26050
NZ_PYKF01000806.1	Protein Homology	CDS	232	681	.	-	0	ID=cds-WP_001196059.1;Parent=gene-C9F04_RS25185;Dbxref=Genbank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9F04_RS25185;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	723	950	.	-	.	ID=gene-C9F04_RS25190;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9F04_RS25190;old_locus_tag=C9F04_26055
NZ_PYKF01000806.1	Protein Homology	CDS	723	950	.	-	0	ID=cds-WP_000135199.1;Parent=gene-C9F04_RS25190;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9F04_RS25190;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	955	1269	.	-	.	ID=gene-C9F04_RS25195;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9F04_RS25195;old_locus_tag=C9F04_26060
NZ_PYKF01000806.1	Protein Homology	CDS	955	1269	.	-	0	ID=cds-WP_146713339.1;Parent=gene-C9F04_RS25195;Dbxref=Genbank:WP_146713339.1;Name=WP_146713339.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9F04_RS25195;product=primosomal replication protein N;protein_id=WP_146713339.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	1276	1671	.	-	.	ID=gene-C9F04_RS25200;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9F04_RS25200;old_locus_tag=C9F04_26065
NZ_PYKF01000806.1	Protein Homology	CDS	1276	1671	.	-	0	ID=cds-WP_001216673.1;Parent=gene-C9F04_RS25200;Dbxref=Genbank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9F04_RS25200;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	2058	2333	.	+	.	ID=gene-C9F04_RS25205;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9F04_RS25205;old_locus_tag=C9F04_26070
NZ_PYKF01000806.1	Protein Homology	CDS	2058	2333	.	+	0	ID=cds-WP_000466074.1;Parent=gene-C9F04_RS25205;Dbxref=Genbank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9F04_RS25205;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	2387	2944	.	-	.	ID=gene-C9F04_RS25210;Name=C9F04_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25210;old_locus_tag=C9F04_26075
NZ_PYKF01000806.1	Protein Homology	CDS	2387	2944	.	-	0	ID=cds-WP_000026294.1;Parent=gene-C9F04_RS25210;Dbxref=Genbank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9F04_RS25210;product=DUF1440 domain-containing protein;protein_id=WP_000026294.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	3032	3718	.	-	.	ID=gene-C9F04_RS25215;Name=C9F04_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25215;old_locus_tag=C9F04_26080
NZ_PYKF01000806.1	Protein Homology	CDS	3032	3718	.	-	0	ID=cds-WP_001170771.1;Parent=gene-C9F04_RS25215;Dbxref=Genbank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9F04_RS25215;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	3718	4572	.	-	.	ID=gene-C9F04_RS25220;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9F04_RS25220;old_locus_tag=C9F04_26085
NZ_PYKF01000806.1	Protein Homology	CDS	3718	4572	.	-	0	ID=cds-WP_000949531.1;Parent=gene-C9F04_RS25220;Dbxref=Genbank:WP_000949531.1;Name=WP_000949531.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9F04_RS25220;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949531.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	4582	5232	.	-	.	ID=gene-C9F04_RS25225;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F04_RS25225;old_locus_tag=C9F04_26090
NZ_PYKF01000806.1	Protein Homology	CDS	4582	5232	.	-	0	ID=cds-WP_146713340.1;Parent=gene-C9F04_RS25225;Dbxref=Genbank:WP_146713340.1;Name=WP_146713340.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9F04_RS25225;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_146713340.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	5246	5710	.	-	.	ID=gene-C9F04_RS25230;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9F04_RS25230;old_locus_tag=C9F04_26095
NZ_PYKF01000806.1	Protein Homology	CDS	5246	5710	.	-	0	ID=cds-WP_146713341.1;Parent=gene-C9F04_RS25230;Dbxref=Genbank:WP_146713341.1;Name=WP_146713341.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9F04_RS25230;product=PTS ascorbate transporter subunit IIA;protein_id=WP_146713341.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	5720	6025	.	-	.	ID=gene-C9F04_RS25235;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9F04_RS25235;old_locus_tag=C9F04_26100
NZ_PYKF01000806.1	Protein Homology	CDS	5720	6025	.	-	0	ID=cds-WP_000218358.1;Parent=gene-C9F04_RS25235;Dbxref=Genbank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9F04_RS25235;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	6041	7438	.	-	.	ID=gene-C9F04_RS25240;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9F04_RS25240;old_locus_tag=C9F04_26105
NZ_PYKF01000806.1	Protein Homology	CDS	6041	7438	.	-	0	ID=cds-WP_000404873.1;Parent=gene-C9F04_RS25240;Dbxref=Genbank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9F04_RS25240;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	pseudogene	7801	8865	.	+	.	ID=gene-C9F04_RS25245;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=pseudogene;locus_tag=C9F04_RS25245;old_locus_tag=C9F04_26110;pseudo=true
NZ_PYKF01000806.1	Protein Homology	CDS	7801	8865	.	+	0	ID=cds-C9F04_RS25245;Parent=gene-C9F04_RS25245;Note=internal stop;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9F04_RS25245;product=L-ascorbate 6-phosphate lactonase;pseudo=true;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	8970	9725	.	+	.	ID=gene-C9F04_RS25250;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9F04_RS25250;old_locus_tag=C9F04_26115
NZ_PYKF01000806.1	Protein Homology	CDS	8970	9725	.	+	0	ID=cds-WP_000133618.1;Parent=gene-C9F04_RS25250;Dbxref=Genbank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9F04_RS25250;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	9722	10471	.	-	.	ID=gene-C9F04_RS25255;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9F04_RS25255;old_locus_tag=C9F04_26120
NZ_PYKF01000806.1	Protein Homology	CDS	9722	10471	.	-	0	ID=cds-WP_000560306.1;Parent=gene-C9F04_RS25255;Dbxref=Genbank:WP_000560306.1;Name=WP_000560306.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9F04_RS25255;product=esterase;protein_id=WP_000560306.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	10655	10984	.	+	.	ID=gene-C9F04_RS25260;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9F04_RS25260;old_locus_tag=C9F04_26125
NZ_PYKF01000806.1	Protein Homology	CDS	10655	10984	.	+	0	ID=cds-WP_000586835.1;Parent=gene-C9F04_RS25260;Dbxref=Genbank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9F04_RS25260;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	11115	11390	.	+	.	ID=gene-C9F04_RS25265;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9F04_RS25265;old_locus_tag=C9F04_26130
NZ_PYKF01000806.1	Protein Homology	CDS	11115	11390	.	+	0	ID=cds-WP_146713342.1;Parent=gene-C9F04_RS25265;Dbxref=Genbank:WP_146713342.1;Name=WP_146713342.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9F04_RS25265;product=DUF1471 family protease activator YjfN;protein_id=WP_146713342.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	11435	13057	.	-	.	ID=gene-C9F04_RS25270;Name=C9F04_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25270;old_locus_tag=C9F04_26135
NZ_PYKF01000806.1	Protein Homology	CDS	11435	13057	.	-	0	ID=cds-WP_061383260.1;Parent=gene-C9F04_RS25270;Dbxref=Genbank:WP_061383260.1;Name=WP_061383260.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9F04_RS25270;product=isovaleryl-CoA dehydrogenase;protein_id=WP_061383260.1;transl_table=11
NZ_PYKF01000806.1	RefSeq	gene	13142	13501	.	-	.	ID=gene-C9F04_RS25275;Name=C9F04_RS25275;end_range=13501,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25275;old_locus_tag=C9F04_26140;partial=true
NZ_PYKF01000806.1	Protein Homology	CDS	13142	13501	.	-	0	ID=cds-WP_186799099.1;Parent=gene-C9F04_RS25275;Dbxref=Genbank:WP_186799099.1;Name=WP_186799099.1;end_range=13501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9F04_RS25275;partial=true;product=glutathionylspermidine synthase family protein;protein_id=WP_186799099.1;transl_table=11
##sequence-region NZ_PYKF01000319.1 1 13493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000319.1	RefSeq	region	1	13493	.	+	.	ID=NZ_PYKF01000319.1:1..13493;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000319.1	RefSeq	gene	1	965	.	-	.	ID=gene-C9F04_RS09310;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9F04_RS09310;old_locus_tag=C9F04_09620;partial=true;start_range=.,1
NZ_PYKF01000319.1	Protein Homology	CDS	1	965	.	-	0	ID=cds-WP_146712539.1;Parent=gene-C9F04_RS09310;Dbxref=Genbank:WP_146712539.1;Name=WP_146712539.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9F04_RS09310;partial=true;product=glutarate dioxygenase GlaH;protein_id=WP_146712539.1;start_range=.,1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	1269	2783	.	-	.	ID=gene-C9F04_RS09315;Name=C9F04_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09315;old_locus_tag=C9F04_09625
NZ_PYKF01000319.1	Protein Homology	CDS	1269	2783	.	-	0	ID=cds-WP_000382035.1;Parent=gene-C9F04_RS09315;Dbxref=Genbank:WP_000382035.1;Name=WP_000382035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9F04_RS09315;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	2794	3228	.	-	.	ID=gene-C9F04_RS09320;Name=C9F04_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09320;old_locus_tag=C9F04_09630
NZ_PYKF01000319.1	Protein Homology	CDS	2794	3228	.	-	0	ID=cds-WP_001574835.1;Parent=gene-C9F04_RS09320;Dbxref=Genbank:WP_001574835.1;Name=WP_001574835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9F04_RS09320;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	3240	4217	.	-	.	ID=gene-C9F04_RS09325;Name=C9F04_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09325;old_locus_tag=C9F04_09635
NZ_PYKF01000319.1	Protein Homology	CDS	3240	4217	.	-	0	ID=cds-WP_146712540.1;Parent=gene-C9F04_RS09325;Dbxref=Genbank:WP_146712540.1;Name=WP_146712540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F04_RS09325;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_146712540.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	4372	5046	.	+	.	ID=gene-C9F04_RS09330;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9F04_RS09330;old_locus_tag=C9F04_09640
NZ_PYKF01000319.1	Protein Homology	CDS	4372	5046	.	+	0	ID=cds-WP_001237934.1;Parent=gene-C9F04_RS09330;Dbxref=Genbank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9F04_RS09330;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	5033	6448	.	+	.	ID=gene-C9F04_RS09335;Name=C9F04_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09335;old_locus_tag=C9F04_09645
NZ_PYKF01000319.1	Protein Homology	CDS	5033	6448	.	+	0	ID=cds-WP_000872348.1;Parent=gene-C9F04_RS09335;Dbxref=Genbank:WP_000872348.1;Name=WP_000872348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9F04_RS09335;product=sensor histidine kinase;protein_id=WP_000872348.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	6581	7594	.	+	.	ID=gene-C9F04_RS09340;Name=C9F04_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09340;old_locus_tag=C9F04_09650
NZ_PYKF01000319.1	Protein Homology	CDS	6581	7594	.	+	0	ID=cds-WP_135369233.1;Parent=gene-C9F04_RS09340;Dbxref=Genbank:WP_135369233.1;Name=WP_135369233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9F04_RS09340;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_135369233.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	8316	9212	.	-	.	ID=gene-C9F04_RS09345;Name=C9F04_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09345;old_locus_tag=C9F04_09655
NZ_PYKF01000319.1	Protein Homology	CDS	8316	9212	.	-	0	ID=cds-WP_039589419.1;Parent=gene-C9F04_RS09345;Dbxref=Genbank:WP_039589419.1;Name=WP_039589419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9F04_RS09345;product=antimicrobial resistance protein Mig-14;protein_id=WP_039589419.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	9506	10435	.	-	.	ID=gene-C9F04_RS09355;Name=C9F04_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09355;old_locus_tag=C9F04_09665
NZ_PYKF01000319.1	Protein Homology	CDS	9506	10435	.	-	0	ID=cds-WP_031605029.1;Parent=gene-C9F04_RS09355;Dbxref=Genbank:WP_031605029.1;Name=WP_031605029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9F04_RS09355;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_031605029.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	10954	12006	.	+	.	ID=gene-C9F04_RS09360;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9F04_RS09360;old_locus_tag=C9F04_09670
NZ_PYKF01000319.1	Protein Homology	CDS	10954	12006	.	+	0	ID=cds-WP_031605027.1;Parent=gene-C9F04_RS09360;Dbxref=Genbank:WP_031605027.1;Name=WP_031605027.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9F04_RS09360;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_031605027.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	12181	12513	.	+	.	ID=gene-C9F04_RS09365;Name=C9F04_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09365;old_locus_tag=C9F04_09675
NZ_PYKF01000319.1	Protein Homology	CDS	12181	12513	.	+	0	ID=cds-WP_077942173.1;Parent=gene-C9F04_RS09365;Dbxref=Genbank:WP_077942173.1;Name=WP_077942173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9F04_RS09365;product=hypothetical protein;protein_id=WP_077942173.1;transl_table=11
NZ_PYKF01000319.1	RefSeq	gene	13027	13493	.	+	.	ID=gene-C9F04_RS09375;Name=C9F04_RS09375;end_range=13493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS09375;old_locus_tag=C9F04_09685;partial=true
NZ_PYKF01000319.1	Protein Homology	CDS	13027	13493	.	+	0	ID=cds-WP_186799017.1;Parent=gene-C9F04_RS09375;Dbxref=Genbank:WP_186799017.1;Name=WP_186799017.1;end_range=13493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=C9F04_RS09375;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_186799017.1;transl_table=11
##sequence-region NZ_PYKF01000143.1 1 13257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000143.1	RefSeq	region	1	13257	.	+	.	ID=NZ_PYKF01000143.1:1..13257;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000143.1	RefSeq	pseudogene	1	403	.	-	.	ID=gene-C9F04_RS02955;Name=C9F04_RS02955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS02955;old_locus_tag=C9F04_03060;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000143.1	Protein Homology	CDS	1	403	.	-	0	ID=cds-C9F04_RS02955;Parent=gene-C9F04_RS02955;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378543.1;locus_tag=C9F04_RS02955;partial=true;product=tetrathionate reductase subunit TtrA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	396	1418	.	-	.	ID=gene-C9F04_RS02960;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9F04_RS02960;old_locus_tag=C9F04_03065
NZ_PYKF01000143.1	Protein Homology	CDS	396	1418	.	-	0	ID=cds-WP_000149760.1;Parent=gene-C9F04_RS02960;Dbxref=Genbank:WP_000149760.1;Name=WP_000149760.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9F04_RS02960;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149760.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	1419	2171	.	-	.	ID=gene-C9F04_RS02965;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9F04_RS02965;old_locus_tag=C9F04_03070
NZ_PYKF01000143.1	Protein Homology	CDS	1419	2171	.	-	0	ID=cds-WP_000269830.1;Parent=gene-C9F04_RS02965;Dbxref=Genbank:WP_000269830.1;Name=WP_000269830.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=C9F04_RS02965;product=tetrathionate reductase subunit TtrB;protein_id=WP_000269830.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	2335	4113	.	+	.	ID=gene-C9F04_RS02970;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9F04_RS02970;old_locus_tag=C9F04_03075
NZ_PYKF01000143.1	Protein Homology	CDS	2335	4113	.	+	0	ID=cds-WP_146712273.1;Parent=gene-C9F04_RS02970;Dbxref=Genbank:WP_146712273.1;Name=WP_146712273.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F04_RS02970;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_146712273.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	4088	4708	.	+	.	ID=gene-C9F04_RS02975;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9F04_RS02975;old_locus_tag=C9F04_03080
NZ_PYKF01000143.1	Protein Homology	CDS	4088	4708	.	+	0	ID=cds-WP_135369763.1;Parent=gene-C9F04_RS02975;Dbxref=Genbank:WP_135369763.1;Name=WP_135369763.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9F04_RS02975;product=tetrathionate respiration response regulator TtrR;protein_id=WP_135369763.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	4806	5018	.	+	.	ID=gene-C9F04_RS02980;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9F04_RS02980;old_locus_tag=C9F04_03085
NZ_PYKF01000143.1	Protein Homology	CDS	4806	5018	.	+	0	ID=cds-WP_000165779.1;Parent=gene-C9F04_RS02980;Dbxref=Genbank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9F04_RS02980;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	5114	6073	.	-	.	ID=gene-C9F04_RS02985;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9F04_RS02985;old_locus_tag=C9F04_03090
NZ_PYKF01000143.1	Protein Homology	CDS	5114	6073	.	-	0	ID=cds-WP_020839382.1;Parent=gene-C9F04_RS02985;Dbxref=Genbank:WP_020839382.1;Name=WP_020839382.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9F04_RS02985;product=transcriptional regulator MlrB;protein_id=WP_020839382.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	6245	6973	.	-	.	ID=gene-C9F04_RS02990;Name=C9F04_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02990;old_locus_tag=C9F04_03095
NZ_PYKF01000143.1	Protein Homology	CDS	6245	6973	.	-	0	ID=cds-WP_000122318.1;Parent=gene-C9F04_RS02990;Dbxref=Genbank:WP_000122318.1;Name=WP_000122318.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9F04_RS02990;product=MerR family transcriptional regulator;protein_id=WP_000122318.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	7152	7790	.	-	.	ID=gene-C9F04_RS02995;Name=C9F04_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS02995;old_locus_tag=C9F04_03100
NZ_PYKF01000143.1	Protein Homology	CDS	7152	7790	.	-	0	ID=cds-WP_023234474.1;Parent=gene-C9F04_RS02995;Dbxref=Genbank:WP_023234474.1;Name=WP_023234474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9F04_RS02995;product=two component system response regulator;protein_id=WP_023234474.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	7821	10583	.	-	.	ID=gene-C9F04_RS03000;Name=C9F04_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03000;old_locus_tag=C9F04_03105
NZ_PYKF01000143.1	Protein Homology	CDS	7821	10583	.	-	0	ID=cds-WP_135369762.1;Parent=gene-C9F04_RS03000;Dbxref=Genbank:WP_135369762.1;Name=WP_135369762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9F04_RS03000;product=two component system sensor kinase;protein_id=WP_135369762.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	10984	11385	.	+	.	ID=gene-C9F04_RS03005;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9F04_RS03005;old_locus_tag=C9F04_03110
NZ_PYKF01000143.1	Protein Homology	CDS	10984	11385	.	+	0	ID=cds-WP_001588845.1;Parent=gene-C9F04_RS03005;Dbxref=Genbank:WP_001588845.1;Name=WP_001588845.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9F04_RS03005;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001588845.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	gene	11387	12880	.	+	.	ID=gene-C9F04_RS03010;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9F04_RS03010;old_locus_tag=C9F04_03115
NZ_PYKF01000143.1	Protein Homology	CDS	11387	12880	.	+	0	ID=cds-WP_000261287.1;Parent=gene-C9F04_RS03010;Dbxref=Genbank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9F04_RS03010;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11
NZ_PYKF01000143.1	RefSeq	pseudogene	12861	13257	.	+	.	ID=gene-C9F04_RS03015;Name=C9F04_RS03015;end_range=13257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03015;old_locus_tag=C9F04_03120;partial=true;pseudo=true
NZ_PYKF01000143.1	Protein Homology	CDS	12861	13257	.	+	0	ID=cds-C9F04_RS03015;Parent=gene-C9F04_RS03015;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9F04_RS03015;partial=true;product=EscD/YscD/HrpQ family type III secretion system inner membrane ring protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000172.1 1 28429
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000172.1	RefSeq	region	1	28429	.	+	.	ID=NZ_PYKF01000172.1:1..28429;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000172.1	RefSeq	gene	1	625	.	+	.	ID=gene-C9F04_RS03645;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9F04_RS03645;old_locus_tag=C9F04_03765;partial=true;start_range=.,1
NZ_PYKF01000172.1	Protein Homology	CDS	1	625	.	+	1	ID=cds-WP_146712302.1;Parent=gene-C9F04_RS03645;Dbxref=Genbank:WP_146712302.1;Name=WP_146712302.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9F04_RS03645;partial=true;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_146712302.1;start_range=.,1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	616	888	.	+	.	ID=gene-C9F04_RS03650;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F04_RS03650;old_locus_tag=C9F04_03770
NZ_PYKF01000172.1	Protein Homology	CDS	616	888	.	+	0	ID=cds-WP_000334871.1;Parent=gene-C9F04_RS03650;Dbxref=Genbank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9F04_RS03650;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	888	2009	.	+	.	ID=gene-C9F04_RS03655;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9F04_RS03655;old_locus_tag=C9F04_03775
NZ_PYKF01000172.1	Protein Homology	CDS	888	2009	.	+	0	ID=cds-WP_146712303.1;Parent=gene-C9F04_RS03655;Dbxref=Genbank:WP_146712303.1;Name=WP_146712303.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9F04_RS03655;product=hydrogenase formation protein HypD;protein_id=WP_146712303.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	2006	3016	.	+	.	ID=gene-C9F04_RS03660;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9F04_RS03660;old_locus_tag=C9F04_03780
NZ_PYKF01000172.1	Protein Homology	CDS	2006	3016	.	+	0	ID=cds-WP_146712304.1;Parent=gene-C9F04_RS03660;Dbxref=Genbank:WP_146712304.1;Name=WP_146712304.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9F04_RS03660;product=hydrogenase expression/formation protein HypE;protein_id=WP_146712304.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	3235	5313	.	+	.	ID=gene-C9F04_RS03665;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9F04_RS03665;old_locus_tag=C9F04_03785
NZ_PYKF01000172.1	Protein Homology	CDS	3235	5313	.	+	0	ID=cds-WP_000122692.1;Parent=gene-C9F04_RS03665;Dbxref=Genbank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9F04_RS03665;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	5375	5719	.	-	.	ID=gene-C9F04_RS03670;Name=C9F04_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03670;old_locus_tag=C9F04_03790
NZ_PYKF01000172.1	Protein Homology	CDS	5375	5719	.	-	0	ID=cds-WP_001117944.1;Parent=gene-C9F04_RS03670;Dbxref=Genbank:WP_001117944.1;Name=WP_001117944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9F04_RS03670;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117944.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	5901	6818	.	+	.	ID=gene-C9F04_RS03675;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9F04_RS03675;old_locus_tag=C9F04_03795
NZ_PYKF01000172.1	Protein Homology	CDS	5901	6818	.	+	0	ID=cds-WP_000182930.1;Parent=gene-C9F04_RS03675;Dbxref=Genbank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9F04_RS03675;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	6815	7636	.	+	.	ID=gene-C9F04_RS03680;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9F04_RS03680;old_locus_tag=C9F04_03800
NZ_PYKF01000172.1	Protein Homology	CDS	6815	7636	.	+	0	ID=cds-WP_023181876.1;Parent=gene-C9F04_RS03680;Dbxref=Genbank:WP_023181876.1;Name=WP_023181876.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9F04_RS03680;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_023181876.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	7633	8493	.	+	.	ID=gene-C9F04_RS03685;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9F04_RS03685;old_locus_tag=C9F04_03805
NZ_PYKF01000172.1	Protein Homology	CDS	7633	8493	.	+	0	ID=cds-WP_146712305.1;Parent=gene-C9F04_RS03685;Dbxref=Genbank:WP_146712305.1;Name=WP_146712305.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9F04_RS03685;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_146712305.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	8484	9332	.	+	.	ID=gene-C9F04_RS03690;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9F04_RS03690;old_locus_tag=C9F04_03810
NZ_PYKF01000172.1	Protein Homology	CDS	8484	9332	.	+	0	ID=cds-WP_000480208.1;Parent=gene-C9F04_RS03690;Dbxref=Genbank:WP_000480208.1;Name=WP_000480208.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9F04_RS03690;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480208.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	9612	10367	.	-	.	ID=gene-C9F04_RS03700;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9F04_RS03700;old_locus_tag=C9F04_03820
NZ_PYKF01000172.1	Protein Homology	CDS	9612	10367	.	-	0	ID=cds-WP_076735875.1;Parent=gene-C9F04_RS03700;Dbxref=Genbank:WP_076735875.1;Name=WP_076735875.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9F04_RS03700;product=transcriptional regulator SprB;protein_id=WP_076735875.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	10752	11639	.	-	.	ID=gene-C9F04_RS03705;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9F04_RS03705;old_locus_tag=C9F04_03830
NZ_PYKF01000172.1	Protein Homology	CDS	10752	11639	.	-	0	ID=cds-WP_000243998.1;Parent=gene-C9F04_RS03705;Dbxref=Genbank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9F04_RS03705;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	11984	12436	.	-	.	ID=gene-C9F04_RS03710;Name=C9F04_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03710;old_locus_tag=C9F04_03835
NZ_PYKF01000172.1	Protein Homology	CDS	11984	12436	.	-	0	ID=cds-WP_000612179.1;Parent=gene-C9F04_RS03710;Dbxref=Genbank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9F04_RS03710;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	12433	13113	.	-	.	ID=gene-C9F04_RS03715;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9F04_RS03715;old_locus_tag=C9F04_03840
NZ_PYKF01000172.1	Protein Homology	CDS	12433	13113	.	-	0	ID=cds-WP_000916654.1;Parent=gene-C9F04_RS03715;Dbxref=Genbank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9F04_RS03715;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	13070	13669	.	-	.	ID=gene-C9F04_RS03720;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9F04_RS03720;old_locus_tag=C9F04_03845
NZ_PYKF01000172.1	Protein Homology	CDS	13070	13669	.	-	0	ID=cds-WP_001591231.1;Parent=gene-C9F04_RS03720;Dbxref=Genbank:WP_001591231.1;Name=WP_001591231.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9F04_RS03720;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001591231.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	13641	14399	.	-	.	ID=gene-C9F04_RS03725;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9F04_RS03725;old_locus_tag=C9F04_03850
NZ_PYKF01000172.1	Protein Homology	CDS	13641	14399	.	-	0	ID=cds-WP_000621238.1;Parent=gene-C9F04_RS03725;Dbxref=Genbank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9F04_RS03725;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	14396	14701	.	-	.	ID=gene-C9F04_RS03730;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9F04_RS03730;old_locus_tag=C9F04_03855
NZ_PYKF01000172.1	Protein Homology	CDS	14396	14701	.	-	0	ID=cds-WP_000020431.1;Parent=gene-C9F04_RS03730;Dbxref=Genbank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9F04_RS03730;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	14720	14962	.	-	.	ID=gene-C9F04_RS03735;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9F04_RS03735;old_locus_tag=C9F04_03860
NZ_PYKF01000172.1	Protein Homology	CDS	14720	14962	.	-	0	ID=cds-WP_000235229.1;Parent=gene-C9F04_RS03735;Dbxref=Genbank:WP_000235229.1;Name=WP_000235229.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9F04_RS03735;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235229.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	14987	16165	.	-	.	ID=gene-C9F04_RS03740;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9F04_RS03740;old_locus_tag=C9F04_03865
NZ_PYKF01000172.1	Protein Homology	CDS	14987	16165	.	-	0	ID=cds-WP_146712306.1;Parent=gene-C9F04_RS03740;Dbxref=Genbank:WP_146712306.1;Name=WP_146712306.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9F04_RS03740;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_146712306.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	16481	17410	.	+	.	ID=gene-C9F04_RS03745;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9F04_RS03745;old_locus_tag=C9F04_03870
NZ_PYKF01000172.1	Protein Homology	CDS	16481	17410	.	+	0	ID=cds-WP_000432702.1;Parent=gene-C9F04_RS03745;Dbxref=Genbank:WP_000432702.1;Name=WP_000432702.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9F04_RS03745;product=transcriptional regulator HilD;protein_id=WP_000432702.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	18499	20160	.	+	.	ID=gene-C9F04_RS03750;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9F04_RS03750;old_locus_tag=C9F04_03875
NZ_PYKF01000172.1	Protein Homology	CDS	18499	20160	.	+	0	ID=cds-WP_001120085.1;Parent=gene-C9F04_RS03750;Dbxref=Genbank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9F04_RS03750;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	20178	20660	.	+	.	ID=gene-C9F04_RS03755;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9F04_RS03755;old_locus_tag=C9F04_03880
NZ_PYKF01000172.1	Protein Homology	CDS	20178	20660	.	+	0	ID=cds-WP_000558930.1;Parent=gene-C9F04_RS03755;Dbxref=Genbank:WP_000558930.1;Name=WP_000558930.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9F04_RS03755;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558930.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	20714	22345	.	-	.	ID=gene-C9F04_RS03760;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9F04_RS03760;old_locus_tag=C9F04_03885
NZ_PYKF01000172.1	Protein Homology	CDS	20714	22345	.	-	0	ID=cds-WP_135369352.1;Parent=gene-C9F04_RS03760;Dbxref=Genbank:WP_135369352.1;Name=WP_135369352.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F04_RS03760;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_135369352.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	22332	22724	.	-	.	ID=gene-C9F04_RS03765;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9F04_RS03765;old_locus_tag=C9F04_03890
NZ_PYKF01000172.1	Protein Homology	CDS	22332	22724	.	-	0	ID=cds-WP_001748715.1;Parent=gene-C9F04_RS03765;Dbxref=Genbank:WP_001748715.1;Name=WP_001748715.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9F04_RS03765;product=chaperone SicP;protein_id=WP_001748715.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	22751	23011	.	-	.	ID=gene-C9F04_RS03770;Name=C9F04_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03770;old_locus_tag=C9F04_03895
NZ_PYKF01000172.1	Protein Homology	CDS	22751	23011	.	-	0	ID=cds-WP_000692249.1;Parent=gene-C9F04_RS03770;Dbxref=Genbank:WP_000692249.1;Name=WP_000692249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9F04_RS03770;product=hypothetical protein;protein_id=WP_000692249.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	23055	23303	.	-	.	ID=gene-C9F04_RS03775;Name=C9F04_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03775;old_locus_tag=C9F04_03900
NZ_PYKF01000172.1	Protein Homology	CDS	23055	23303	.	-	0	ID=cds-WP_001055579.1;Parent=gene-C9F04_RS03775;Dbxref=Genbank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=C9F04_RS03775;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	23322	25379	.	-	.	ID=gene-C9F04_RS03780;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9F04_RS03780;old_locus_tag=C9F04_03905
NZ_PYKF01000172.1	Protein Homology	CDS	23322	25379	.	-	0	ID=cds-WP_135369353.1;Parent=gene-C9F04_RS03780;Dbxref=Genbank:WP_135369353.1;Name=WP_135369353.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9F04_RS03780;product=SPI-1 type III secretion system effector SipA;protein_id=WP_135369353.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	25398	26429	.	-	.	ID=gene-C9F04_RS03785;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9F04_RS03785;old_locus_tag=C9F04_03910
NZ_PYKF01000172.1	Protein Homology	CDS	25398	26429	.	-	0	ID=cds-WP_023231968.1;Parent=gene-C9F04_RS03785;Dbxref=Genbank:WP_023231968.1;Name=WP_023231968.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9F04_RS03785;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_023231968.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	gene	26500	27729	.	-	.	ID=gene-C9F04_RS03790;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9F04_RS03790;old_locus_tag=C9F04_03915
NZ_PYKF01000172.1	Protein Homology	CDS	26500	27729	.	-	0	ID=cds-WP_000909019.1;Parent=gene-C9F04_RS03790;Dbxref=Genbank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9F04_RS03790;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11
NZ_PYKF01000172.1	RefSeq	pseudogene	27757	28429	.	-	.	ID=gene-C9F04_RS03795;Name=sipB;end_range=28429,.;gbkey=Gene;gene=sipB;gene_biotype=pseudogene;locus_tag=C9F04_RS03795;old_locus_tag=C9F04_03920;partial=true;pseudo=true
NZ_PYKF01000172.1	Protein Homology	CDS	27757	28429	.	-	1	ID=cds-C9F04_RS03795;Parent=gene-C9F04_RS03795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=28429,.;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9F04_RS03795;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000374.1 1 13256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000374.1	RefSeq	region	1	13256	.	+	.	ID=NZ_PYKF01000374.1:1..13256;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000374.1	RefSeq	gene	1	256	.	-	.	ID=gene-C9F04_RS10960;Name=C9F04_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10960;old_locus_tag=C9F04_11315;partial=true;start_range=.,1
NZ_PYKF01000374.1	Protein Homology	CDS	1	256	.	-	0	ID=cds-WP_186799020.1;Parent=gene-C9F04_RS10960;Dbxref=Genbank:WP_186799020.1;Name=WP_186799020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=C9F04_RS10960;partial=true;product=phage regulatory CII family protein;protein_id=WP_186799020.1;start_range=.,1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	289	531	.	-	.	ID=gene-C9F04_RS10965;Name=C9F04_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10965;old_locus_tag=C9F04_11320
NZ_PYKF01000374.1	Protein Homology	CDS	289	531	.	-	0	ID=cds-WP_000102106.1;Parent=gene-C9F04_RS10965;Dbxref=Genbank:WP_000102106.1;Name=WP_000102106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817401.1;locus_tag=C9F04_RS10965;product=Rha family transcriptional regulator;protein_id=WP_000102106.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	648	1280	.	+	.	ID=gene-C9F04_RS10970;Name=C9F04_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10970;old_locus_tag=C9F04_11325
NZ_PYKF01000374.1	Protein Homology	CDS	648	1280	.	+	0	ID=cds-WP_135369308.1;Parent=gene-C9F04_RS10970;Dbxref=Genbank:WP_135369308.1;Name=WP_135369308.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=C9F04_RS10970;product=helix-turn-helix domain-containing protein;protein_id=WP_135369308.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	1283	2302	.	+	.	ID=gene-C9F04_RS10975;Name=C9F04_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10975;old_locus_tag=C9F04_11330
NZ_PYKF01000374.1	Protein Homology	CDS	1283	2302	.	+	0	ID=cds-WP_135369307.1;Parent=gene-C9F04_RS10975;Dbxref=Genbank:WP_135369307.1;Name=WP_135369307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835221.1;locus_tag=C9F04_RS10975;product=site-specific integrase;protein_id=WP_135369307.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	2362	3840	.	+	.	ID=gene-C9F04_RS10980;Name=C9F04_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10980;old_locus_tag=C9F04_11335
NZ_PYKF01000374.1	GeneMarkS-2+	CDS	2362	3840	.	+	0	ID=cds-WP_135420215.1;Parent=gene-C9F04_RS10980;Dbxref=Genbank:WP_135420215.1;Name=WP_135420215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS10980;product=hypothetical protein;protein_id=WP_135420215.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	4141	4356	.	-	.	ID=gene-C9F04_RS10985;Name=C9F04_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10985;old_locus_tag=C9F04_11345
NZ_PYKF01000374.1	Protein Homology	CDS	4141	4356	.	-	0	ID=cds-WP_000980503.1;Parent=gene-C9F04_RS10985;Dbxref=Genbank:WP_000980503.1;Name=WP_000980503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016760.1;locus_tag=C9F04_RS10985;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980503.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	4424	5527	.	-	.	ID=gene-C9F04_RS10990;Name=C9F04_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10990;old_locus_tag=C9F04_11350
NZ_PYKF01000374.1	Protein Homology	CDS	4424	5527	.	-	0	ID=cds-WP_146712632.1;Parent=gene-C9F04_RS10990;Dbxref=Genbank:WP_146712632.1;Name=WP_146712632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F04_RS10990;product=phage late control D family protein;protein_id=WP_146712632.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	5524	6009	.	-	.	ID=gene-C9F04_RS10995;Name=C9F04_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS10995;old_locus_tag=C9F04_11355
NZ_PYKF01000374.1	Protein Homology	CDS	5524	6009	.	-	0	ID=cds-WP_064012856.1;Parent=gene-C9F04_RS10995;Dbxref=Genbank:WP_064012856.1;Name=WP_064012856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9F04_RS10995;product=phage tail protein;protein_id=WP_064012856.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	pseudogene	6006	7616	.	-	.	ID=gene-C9F04_RS11000;Name=C9F04_RS11000;end_range=7616,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11000;old_locus_tag=C9F04_11360;partial=true;pseudo=true
NZ_PYKF01000374.1	Protein Homology	CDS	6006	7616	.	-	0	ID=cds-C9F04_RS11000;Parent=gene-C9F04_RS11000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016032,GO:0005198;end_range=7616,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282780.1;locus_tag=C9F04_RS11000;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	7775	8905	.	+	.	ID=gene-C9F04_RS11005;Name=C9F04_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11005;old_locus_tag=C9F04_11365
NZ_PYKF01000374.1	Protein Homology	CDS	7775	8905	.	+	0	ID=cds-WP_079842136.1;Parent=gene-C9F04_RS11005;Dbxref=Genbank:WP_079842136.1;Name=WP_079842136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708294.1;locus_tag=C9F04_RS11005;product=DNA cytosine methyltransferase;protein_id=WP_079842136.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	8862	9845	.	+	.	ID=gene-C9F04_RS11010;Name=C9F04_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11010;old_locus_tag=C9F04_11370
NZ_PYKF01000374.1	Protein Homology	CDS	8862	9845	.	+	0	ID=cds-WP_135369320.1;Parent=gene-C9F04_RS11010;Dbxref=Genbank:WP_135369320.1;Name=WP_135369320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392887.1;locus_tag=C9F04_RS11010;product=HNH endonuclease;protein_id=WP_135369320.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	10392	11552	.	+	.	ID=gene-C9F04_RS11015;Name=C9F04_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11015;old_locus_tag=C9F04_11375
NZ_PYKF01000374.1	Protein Homology	CDS	10392	11552	.	+	0	ID=cds-WP_079897614.1;Parent=gene-C9F04_RS11015;Dbxref=Genbank:WP_079897614.1;Name=WP_079897614.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830285.1;locus_tag=C9F04_RS11015;product=IS30 family transposase;protein_id=WP_079897614.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	gene	11665	12171	.	-	.	ID=gene-C9F04_RS11020;Name=C9F04_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS11020;old_locus_tag=C9F04_11380
NZ_PYKF01000374.1	Protein Homology	CDS	11665	12171	.	-	0	ID=cds-WP_000301886.1;Parent=gene-C9F04_RS11020;Dbxref=Genbank:WP_000301886.1;Name=WP_000301886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=C9F04_RS11020;product=HNH endonuclease;protein_id=WP_000301886.1;transl_table=11
NZ_PYKF01000374.1	RefSeq	pseudogene	12589	13256	.	+	.	ID=gene-C9F04_RS11025;Name=C9F04_RS11025;end_range=13256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS11025;old_locus_tag=C9F04_11385;partial=true;pseudo=true
NZ_PYKF01000374.1	Protein Homology	CDS	12589	13256	.	+	0	ID=cds-C9F04_RS11025;Parent=gene-C9F04_RS11025;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=13256,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9F04_RS11025;partial=true;product=transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000640.1 1 13207
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000640.1	RefSeq	region	1	13207	.	+	.	ID=NZ_PYKF01000640.1:1..13207;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000640.1	RefSeq	gene	1	368	.	-	.	ID=gene-C9F04_RS19600;Name=C9F04_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19600;old_locus_tag=C9F04_20235;partial=true;start_range=.,1
NZ_PYKF01000640.1	Protein Homology	CDS	1	368	.	-	0	ID=cds-WP_261771393.1;Parent=gene-C9F04_RS19600;Dbxref=Genbank:WP_261771393.1;Name=WP_261771393.1;Ontology_term=GO:0003855;gbkey=CDS;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9F04_RS19600;partial=true;product=type I 3-dehydroquinate dehydratase;protein_id=WP_261771393.1;start_range=.,1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	413	1279	.	-	.	ID=gene-C9F04_RS19605;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9F04_RS19605;old_locus_tag=C9F04_20240
NZ_PYKF01000640.1	Protein Homology	CDS	413	1279	.	-	0	ID=cds-WP_000383488.1;Parent=gene-C9F04_RS19605;Dbxref=Genbank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9F04_RS19605;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	1346	2581	.	-	.	ID=gene-C9F04_RS19610;Name=C9F04_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19610;old_locus_tag=C9F04_20245
NZ_PYKF01000640.1	Protein Homology	CDS	1346	2581	.	-	0	ID=cds-WP_000081211.1;Parent=gene-C9F04_RS19610;Dbxref=Genbank:WP_000081211.1;Name=WP_000081211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9F04_RS19610;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	3094	4305	.	-	.	ID=gene-C9F04_RS19620;Name=C9F04_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19620;old_locus_tag=C9F04_20250
NZ_PYKF01000640.1	Protein Homology	CDS	3094	4305	.	-	0	ID=cds-WP_135369766.1;Parent=gene-C9F04_RS19620;Dbxref=Genbank:WP_135369766.1;Name=WP_135369766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9F04_RS19620;product=MFS transporter;protein_id=WP_135369766.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	4446	4805	.	-	.	ID=gene-C9F04_RS19625;Name=C9F04_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19625;old_locus_tag=C9F04_20255
NZ_PYKF01000640.1	Protein Homology	CDS	4446	4805	.	-	0	ID=cds-WP_023237082.1;Parent=gene-C9F04_RS19625;Dbxref=Genbank:WP_023237082.1;Name=WP_023237082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9F04_RS19625;product=YdiL family protein;protein_id=WP_023237082.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	4973	5080	.	-	.	ID=gene-C9F04_RS19630;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9F04_RS19630;old_locus_tag=C9F04_20260
NZ_PYKF01000640.1	cmsearch	antisense_RNA	4973	5080	.	-	.	ID=rna-C9F04_RS19630;Parent=gene-C9F04_RS19630;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19630;product=antisense sRNA RprA
NZ_PYKF01000640.1	cmsearch	exon	4973	5080	.	-	.	ID=exon-C9F04_RS19630-1;Parent=rna-C9F04_RS19630;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F04_RS19630;product=antisense sRNA RprA
NZ_PYKF01000640.1	RefSeq	gene	5263	6381	.	-	.	ID=gene-C9F04_RS19635;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9F04_RS19635;old_locus_tag=C9F04_20265
NZ_PYKF01000640.1	Protein Homology	CDS	5263	6381	.	-	0	ID=cds-WP_000248615.1;Parent=gene-C9F04_RS19635;Dbxref=Genbank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9F04_RS19635;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	6646	9702	.	+	.	ID=gene-C9F04_RS19640;Name=C9F04_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19640;old_locus_tag=C9F04_20270
NZ_PYKF01000640.1	Protein Homology	CDS	6646	9702	.	+	0	ID=cds-WP_146713052.1;Parent=gene-C9F04_RS19640;Dbxref=Genbank:WP_146713052.1;Name=WP_146713052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9F04_RS19640;product=FAD-binding oxidoreductase;protein_id=WP_146713052.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	9699	10109	.	+	.	ID=gene-C9F04_RS19645;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9F04_RS19645;old_locus_tag=C9F04_20275
NZ_PYKF01000640.1	Protein Homology	CDS	9699	10109	.	+	0	ID=cds-WP_000637930.1;Parent=gene-C9F04_RS19645;Dbxref=Genbank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9F04_RS19645;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	10208	10396	.	+	.	ID=gene-C9F04_RS19650;Name=C9F04_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19650;old_locus_tag=C9F04_20280
NZ_PYKF01000640.1	Protein Homology	CDS	10208	10396	.	+	0	ID=cds-WP_001537749.1;Parent=gene-C9F04_RS19650;Dbxref=Genbank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9F04_RS19650;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	10684	12030	.	-	.	ID=gene-C9F04_RS19655;Name=C9F04_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS19655;old_locus_tag=C9F04_20285
NZ_PYKF01000640.1	Protein Homology	CDS	10684	12030	.	-	0	ID=cds-WP_079802032.1;Parent=gene-C9F04_RS19655;Dbxref=Genbank:WP_079802032.1;Name=WP_079802032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9F04_RS19655;product=L-cystine transporter;protein_id=WP_079802032.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	gene	12457	12825	.	+	.	ID=gene-C9F04_RS19660;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9F04_RS19660;old_locus_tag=C9F04_20290
NZ_PYKF01000640.1	Protein Homology	CDS	12457	12825	.	+	0	ID=cds-WP_000418970.1;Parent=gene-C9F04_RS19660;Dbxref=Genbank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9F04_RS19660;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11
NZ_PYKF01000640.1	RefSeq	pseudogene	12834	13207	.	+	.	ID=gene-C9F04_RS19665;Name=C9F04_RS19665;end_range=13207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS19665;old_locus_tag=C9F04_20295;partial=true;pseudo=true
NZ_PYKF01000640.1	Protein Homology	CDS	12834	13207	.	+	0	ID=cds-C9F04_RS19665;Parent=gene-C9F04_RS19665;Note=with SufCD activates cysteine desulfurase SufS%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F04_RS19665;partial=true;product=Fe-S cluster assembly protein SufB;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000784.1 1 13119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000784.1	RefSeq	region	1	13119	.	+	.	ID=NZ_PYKF01000784.1:1..13119;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000784.1	RefSeq	pseudogene	1	569	.	-	.	ID=gene-C9F04_RS24450;Name=C9F04_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24450;old_locus_tag=C9F04_25275;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000784.1	Protein Homology	CDS	1	569	.	-	0	ID=cds-C9F04_RS24450;Parent=gene-C9F04_RS24450;Note=responsible for the influx of magnesium ions%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224459.1;locus_tag=C9F04_RS24450;partial=true;product=magnesium transporter CorA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	725	781	.	-	.	ID=gene-C9F04_RS26820;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9F04_RS26820
NZ_PYKF01000784.1	Protein Homology	CDS	725	781	.	-	0	ID=cds-WP_212723238.1;Parent=gene-C9F04_RS26820;Dbxref=Genbank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9F04_RS26820;product=hypothetical protein;protein_id=WP_212723238.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	1041	3203	.	-	.	ID=gene-C9F04_RS24455;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9F04_RS24455;old_locus_tag=C9F04_25285
NZ_PYKF01000784.1	Protein Homology	CDS	1041	3203	.	-	0	ID=cds-WP_000383436.1;Parent=gene-C9F04_RS24455;Dbxref=Genbank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9F04_RS24455;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	3339	4055	.	-	.	ID=gene-C9F04_RS24460;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9F04_RS24460;old_locus_tag=C9F04_25290
NZ_PYKF01000784.1	Protein Homology	CDS	3339	4055	.	-	0	ID=cds-WP_001213560.1;Parent=gene-C9F04_RS24460;Dbxref=Genbank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9F04_RS24460;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	4055	4957	.	-	.	ID=gene-C9F04_RS24465;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9F04_RS24465;old_locus_tag=C9F04_25295
NZ_PYKF01000784.1	Protein Homology	CDS	4055	4957	.	-	0	ID=cds-WP_000132874.1;Parent=gene-C9F04_RS24465;Dbxref=Genbank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9F04_RS24465;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	4954	5661	.	-	.	ID=gene-C9F04_RS24470;Name=C9F04_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24470;old_locus_tag=C9F04_25300
NZ_PYKF01000784.1	Protein Homology	CDS	4954	5661	.	-	0	ID=cds-WP_000812763.1;Parent=gene-C9F04_RS24470;Dbxref=Genbank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9F04_RS24470;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	5658	6482	.	-	.	ID=gene-C9F04_RS24475;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9F04_RS24475;old_locus_tag=C9F04_25305
NZ_PYKF01000784.1	Protein Homology	CDS	5658	6482	.	-	0	ID=cds-WP_146713302.1;Parent=gene-C9F04_RS24475;Dbxref=Genbank:WP_146713302.1;Name=WP_146713302.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9F04_RS24475;product=diaminopimelate epimerase;protein_id=WP_146713302.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	6519	6722	.	-	.	ID=gene-C9F04_RS24480;Name=C9F04_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24480;old_locus_tag=C9F04_25310
NZ_PYKF01000784.1	Protein Homology	CDS	6519	6722	.	-	0	ID=cds-WP_146713301.1;Parent=gene-C9F04_RS24480;Dbxref=Genbank:WP_146713301.1;Name=WP_146713301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9F04_RS24480;product=lipoprotein;protein_id=WP_146713301.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	6908	7159	.	+	.	ID=gene-C9F04_RS26710;Name=C9F04_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26710;old_locus_tag=C9F04_25315
NZ_PYKF01000784.1	GeneMarkS-2+	CDS	6908	7159	.	+	0	ID=cds-WP_001621231.1;Parent=gene-C9F04_RS26710;Dbxref=Genbank:WP_001621231.1;Name=WP_001621231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS26710;product=hypothetical protein;protein_id=WP_001621231.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	pseudogene	7135	7431	.	+	.	ID=gene-C9F04_RS24485;Name=C9F04_RS24485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24485;old_locus_tag=C9F04_25320;partial=true;pseudo=true;start_range=.,7135
NZ_PYKF01000784.1	Protein Homology	CDS	7135	7431	.	+	0	ID=cds-C9F04_RS24485;Parent=gene-C9F04_RS24485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604297.1;locus_tag=C9F04_RS24485;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7135;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	7419	7808	.	+	.	ID=gene-C9F04_RS24490;Name=C9F04_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS24490;old_locus_tag=C9F04_25325
NZ_PYKF01000784.1	Protein Homology	CDS	7419	7808	.	+	0	ID=cds-WP_135369566.1;Parent=gene-C9F04_RS24490;Dbxref=Genbank:WP_135369566.1;Name=WP_135369566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9F04_RS24490;product=DUF3021 family protein;protein_id=WP_135369566.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	7878	8198	.	+	.	ID=gene-C9F04_RS24495;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9F04_RS24495;old_locus_tag=C9F04_25330
NZ_PYKF01000784.1	Protein Homology	CDS	7878	8198	.	+	0	ID=cds-WP_000999921.1;Parent=gene-C9F04_RS24495;Dbxref=Genbank:WP_000999921.1;Name=WP_000999921.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9F04_RS24495;product=iron donor protein CyaY;protein_id=WP_000999921.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	8276	10822	.	-	.	ID=gene-C9F04_RS24500;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9F04_RS24500;old_locus_tag=C9F04_25335
NZ_PYKF01000784.1	Protein Homology	CDS	8276	10822	.	-	0	ID=cds-WP_000281718.1;Parent=gene-C9F04_RS24500;Dbxref=Genbank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9F04_RS24500;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	11199	12140	.	+	.	ID=gene-C9F04_RS24505;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9F04_RS24505;old_locus_tag=C9F04_25340
NZ_PYKF01000784.1	Protein Homology	CDS	11199	12140	.	+	0	ID=cds-WP_001521319.1;Parent=gene-C9F04_RS24505;Dbxref=Genbank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9F04_RS24505;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	gene	12137	12877	.	+	.	ID=gene-C9F04_RS24510;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9F04_RS24510;old_locus_tag=C9F04_25345
NZ_PYKF01000784.1	Protein Homology	CDS	12137	12877	.	+	0	ID=cds-WP_000025491.1;Parent=gene-C9F04_RS24510;Dbxref=Genbank:WP_000025491.1;Name=WP_000025491.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9F04_RS24510;product=uroporphyrinogen-III synthase;protein_id=WP_000025491.1;transl_table=11
NZ_PYKF01000784.1	RefSeq	pseudogene	12899	13060	.	+	.	ID=gene-C9F04_RS24515;Name=C9F04_RS24515;end_range=13060,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS24515;old_locus_tag=C9F04_25350;partial=true;pseudo=true
NZ_PYKF01000784.1	Protein Homology	CDS	12899	13060	.	+	0	ID=cds-C9F04_RS24515;Parent=gene-C9F04_RS24515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9F04_RS24515;partial=true;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000418.1 1 13051
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000418.1	RefSeq	region	1	13051	.	+	.	ID=NZ_PYKF01000418.1:1..13051;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000418.1	RefSeq	gene	1	624	.	+	.	ID=gene-C9F04_RS12400;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=C9F04_RS12400;old_locus_tag=C9F04_12815;partial=true;start_range=.,1
NZ_PYKF01000418.1	Protein Homology	CDS	1	624	.	+	0	ID=cds-WP_146712693.1;Parent=gene-C9F04_RS12400;Dbxref=Genbank:WP_146712693.1;Name=WP_146712693.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=C9F04_RS12400;partial=true;product=5-deoxy-glucuronate isomerase;protein_id=WP_146712693.1;start_range=.,1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	964	2400	.	-	.	ID=gene-C9F04_RS12405;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=C9F04_RS12405;old_locus_tag=C9F04_12820
NZ_PYKF01000418.1	Protein Homology	CDS	964	2400	.	-	0	ID=cds-WP_000083108.1;Parent=gene-C9F04_RS12405;Dbxref=Genbank:WP_000083108.1;Name=WP_000083108.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=C9F04_RS12405;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083108.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	2859	4292	.	+	.	ID=gene-C9F04_RS12415;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=C9F04_RS12415;old_locus_tag=C9F04_12830
NZ_PYKF01000418.1	Protein Homology	CDS	2859	4292	.	+	0	ID=cds-WP_000107710.1;Parent=gene-C9F04_RS12415;Dbxref=Genbank:WP_000107710.1;Name=WP_000107710.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9F04_RS12415;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107710.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	4343	5176	.	-	.	ID=gene-C9F04_RS12420;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=C9F04_RS12420;old_locus_tag=C9F04_12835
NZ_PYKF01000418.1	Protein Homology	CDS	4343	5176	.	-	0	ID=cds-WP_000033840.1;Parent=gene-C9F04_RS12420;Dbxref=Genbank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=C9F04_RS12420;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	5667	7046	.	-	.	ID=gene-C9F04_RS12425;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9F04_RS12425;old_locus_tag=C9F04_12845
NZ_PYKF01000418.1	Protein Homology	CDS	5667	7046	.	-	0	ID=cds-WP_001219833.1;Parent=gene-C9F04_RS12425;Dbxref=Genbank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=C9F04_RS12425;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	7221	8219	.	+	.	ID=gene-C9F04_RS12430;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9F04_RS12430;old_locus_tag=C9F04_12850
NZ_PYKF01000418.1	Protein Homology	CDS	7221	8219	.	+	0	ID=cds-WP_000853764.1;Parent=gene-C9F04_RS12430;Dbxref=Genbank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9F04_RS12430;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	8446	8976	.	+	.	ID=gene-C9F04_RS12435;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9F04_RS12435;old_locus_tag=C9F04_12855
NZ_PYKF01000418.1	Protein Homology	CDS	8446	8976	.	+	0	ID=cds-WP_000055079.1;Parent=gene-C9F04_RS12435;Dbxref=Genbank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9F04_RS12435;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	9386	10549	.	+	.	ID=gene-C9F04_RS12440;Name=C9F04_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12440;old_locus_tag=C9F04_12860
NZ_PYKF01000418.1	Protein Homology	CDS	9386	10549	.	+	0	ID=cds-WP_135419959.1;Parent=gene-C9F04_RS12440;Dbxref=Genbank:WP_135419959.1;Name=WP_135419959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9F04_RS12440;product=metallo-dependent hydrolase;protein_id=WP_135419959.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	10546	11754	.	+	.	ID=gene-C9F04_RS12445;Name=C9F04_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12445;old_locus_tag=C9F04_12865
NZ_PYKF01000418.1	Protein Homology	CDS	10546	11754	.	+	0	ID=cds-WP_000200803.1;Parent=gene-C9F04_RS12445;Dbxref=Genbank:WP_000200803.1;Name=WP_000200803.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9F04_RS12445;product=MFS transporter;protein_id=WP_000200803.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	11808	12152	.	-	.	ID=gene-C9F04_RS12450;Name=C9F04_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12450;old_locus_tag=C9F04_12870
NZ_PYKF01000418.1	Protein Homology	CDS	11808	12152	.	-	0	ID=cds-WP_001219167.1;Parent=gene-C9F04_RS12450;Dbxref=Genbank:WP_001219167.1;Name=WP_001219167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9F04_RS12450;product=gamma-glutamylcyclotransferase;protein_id=WP_001219167.1;transl_table=11
NZ_PYKF01000418.1	RefSeq	gene	12155	13051	.	-	.	ID=gene-C9F04_RS12455;Name=C9F04_RS12455;end_range=13051,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS12455;old_locus_tag=C9F04_12875;partial=true
NZ_PYKF01000418.1	Protein Homology	CDS	12155	13051	.	-	0	ID=cds-WP_186799023.1;Parent=gene-C9F04_RS12455;Dbxref=Genbank:WP_186799023.1;Name=WP_186799023.1;Ontology_term=GO:0009306,GO:0005887;end_range=13051,.;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F04_RS12455;partial=true;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_186799023.1;transl_table=11
##sequence-region NZ_PYKF01000829.1 1 13046
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000829.1	RefSeq	region	1	13046	.	+	.	ID=NZ_PYKF01000829.1:1..13046;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000829.1	RefSeq	gene	1	1152	.	-	.	ID=gene-C9F04_RS25950;Name=C9F04_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25950;old_locus_tag=C9F04_26855;partial=true;start_range=.,1
NZ_PYKF01000829.1	Protein Homology	CDS	1	1152	.	-	0	ID=cds-WP_146713374.1;Parent=gene-C9F04_RS25950;Dbxref=Genbank:WP_146713374.1;Name=WP_146713374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F04_RS25950;partial=true;product=toprim domain-containing protein;protein_id=WP_146713374.1;start_range=.,1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	1149	1532	.	-	.	ID=gene-C9F04_RS25955;Name=C9F04_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25955;old_locus_tag=C9F04_26860
NZ_PYKF01000829.1	Protein Homology	CDS	1149	1532	.	-	0	ID=cds-WP_135369717.1;Parent=gene-C9F04_RS25955;Dbxref=Genbank:WP_135369717.1;Name=WP_135369717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=C9F04_RS25955;product=DUF5375 family protein;protein_id=WP_135369717.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	1529	1813	.	-	.	ID=gene-C9F04_RS25960;Name=C9F04_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25960;old_locus_tag=C9F04_26865
NZ_PYKF01000829.1	Protein Homology	CDS	1529	1813	.	-	0	ID=cds-WP_135369718.1;Parent=gene-C9F04_RS25960;Dbxref=Genbank:WP_135369718.1;Name=WP_135369718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027153.1;locus_tag=C9F04_RS25960;product=hypothetical protein;protein_id=WP_135369718.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	1845	2204	.	-	.	ID=gene-C9F04_RS25965;Name=C9F04_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25965;old_locus_tag=C9F04_26870
NZ_PYKF01000829.1	Protein Homology	CDS	1845	2204	.	-	0	ID=cds-WP_135369719.1;Parent=gene-C9F04_RS25965;Dbxref=Genbank:WP_135369719.1;Name=WP_135369719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=C9F04_RS25965;product=hypothetical protein;protein_id=WP_135369719.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	2197	2373	.	-	.	ID=gene-C9F04_RS26715;Name=C9F04_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26715
NZ_PYKF01000829.1	Protein Homology	CDS	2197	2373	.	-	0	ID=cds-WP_001118612.1;Parent=gene-C9F04_RS26715;Dbxref=Genbank:WP_001118612.1;Name=WP_001118612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=C9F04_RS26715;product=host cell division inhibitor Icd-like protein;protein_id=WP_001118612.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	2561	2746	.	+	.	ID=gene-C9F04_RS26720;Name=C9F04_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26720
NZ_PYKF01000829.1	Protein Homology	CDS	2561	2746	.	+	0	ID=cds-WP_023258407.1;Parent=gene-C9F04_RS26720;Dbxref=Genbank:WP_023258407.1;Name=WP_023258407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235891.1;locus_tag=C9F04_RS26720;product=hypothetical protein;protein_id=WP_023258407.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	2856	3146	.	-	.	ID=gene-C9F04_RS25975;Name=C9F04_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25975;old_locus_tag=C9F04_26880
NZ_PYKF01000829.1	Protein Homology	CDS	2856	3146	.	-	0	ID=cds-WP_077950939.1;Parent=gene-C9F04_RS25975;Dbxref=Genbank:WP_077950939.1;Name=WP_077950939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=C9F04_RS25975;product=AlpA family phage regulatory protein;protein_id=WP_077950939.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	3251	4123	.	-	.	ID=gene-C9F04_RS25980;Name=C9F04_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25980;old_locus_tag=C9F04_26885
NZ_PYKF01000829.1	GeneMarkS-2+	CDS	3251	4123	.	-	0	ID=cds-WP_135419997.1;Parent=gene-C9F04_RS25980;Dbxref=Genbank:WP_135419997.1;Name=WP_135419997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9F04_RS25980;product=hypothetical protein;protein_id=WP_135419997.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	4120	5412	.	-	.	ID=gene-C9F04_RS25985;Name=C9F04_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25985;old_locus_tag=C9F04_26890
NZ_PYKF01000829.1	Protein Homology	CDS	4120	5412	.	-	0	ID=cds-WP_146713375.1;Parent=gene-C9F04_RS25985;Dbxref=Genbank:WP_146713375.1;Name=WP_146713375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120210.1;locus_tag=C9F04_RS25985;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_146713375.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	5587	5658	.	-	.	ID=gene-C9F04_RS25990;Name=C9F04_RS25990;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F04_RS25990;old_locus_tag=C9F04_26895
NZ_PYKF01000829.1	tRNAscan-SE	tRNA	5587	5658	.	-	.	ID=rna-C9F04_RS25990;Parent=gene-C9F04_RS25990;anticodon=(pos:complement(5623..5625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25990;product=tRNA-Arg
NZ_PYKF01000829.1	tRNAscan-SE	exon	5587	5658	.	-	.	ID=exon-C9F04_RS25990-1;Parent=rna-C9F04_RS25990;anticodon=(pos:complement(5623..5625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=C9F04_RS25990;product=tRNA-Arg
NZ_PYKF01000829.1	RefSeq	gene	5734	6675	.	-	.	ID=gene-C9F04_RS25995;Name=C9F04_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS25995;old_locus_tag=C9F04_26900
NZ_PYKF01000829.1	Protein Homology	CDS	5734	6675	.	-	0	ID=cds-WP_146713376.1;Parent=gene-C9F04_RS25995;Dbxref=Genbank:WP_146713376.1;Name=WP_146713376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9F04_RS25995;product=formate/nitrite transporter family protein;protein_id=WP_146713376.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	6964	7719	.	+	.	ID=gene-C9F04_RS26000;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9F04_RS26000;old_locus_tag=C9F04_26905
NZ_PYKF01000829.1	Protein Homology	CDS	6964	7719	.	+	0	ID=cds-WP_000776787.1;Parent=gene-C9F04_RS26000;Dbxref=Genbank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9F04_RS26000;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	7780	9087	.	-	.	ID=gene-C9F04_RS26005;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9F04_RS26005;old_locus_tag=C9F04_26910
NZ_PYKF01000829.1	Protein Homology	CDS	7780	9087	.	-	0	ID=cds-WP_001518618.1;Parent=gene-C9F04_RS26005;Dbxref=Genbank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9F04_RS26005;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	9458	9742	.	+	.	ID=gene-C9F04_RS26010;Name=C9F04_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS26010;old_locus_tag=C9F04_26915
NZ_PYKF01000829.1	Protein Homology	CDS	9458	9742	.	+	0	ID=cds-WP_000030904.1;Parent=gene-C9F04_RS26010;Dbxref=Genbank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9F04_RS26010;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	9920	11230	.	+	.	ID=gene-C9F04_RS26015;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9F04_RS26015;old_locus_tag=C9F04_26920
NZ_PYKF01000829.1	Protein Homology	CDS	9920	11230	.	+	0	ID=cds-WP_135369422.1;Parent=gene-C9F04_RS26015;Dbxref=Genbank:WP_135369422.1;Name=WP_135369422.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9F04_RS26015;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_135369422.1;transl_table=11
NZ_PYKF01000829.1	RefSeq	gene	11230	13046	.	+	.	ID=gene-C9F04_RS26020;Name=fadJ;end_range=13046,.;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9F04_RS26020;old_locus_tag=C9F04_26925;partial=true
NZ_PYKF01000829.1	Protein Homology	CDS	11230	13046	.	+	0	ID=cds-WP_146713377.1;Parent=gene-C9F04_RS26020;Dbxref=Genbank:WP_146713377.1;Name=WP_146713377.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;end_range=13046,.;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9F04_RS26020;partial=true;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_146713377.1;transl_table=11
##sequence-region NZ_PYKF01000200.1 1 13041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000200.1	RefSeq	region	1	13041	.	+	.	ID=NZ_PYKF01000200.1:1..13041;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000200.1	RefSeq	pseudogene	1	155	.	+	.	ID=gene-C9F04_RS26905;Name=C9F04_RS26905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS26905;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000200.1	Protein Homology	CDS	1	155	.	+	2	ID=cds-C9F04_RS26905;Parent=gene-C9F04_RS26905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093498.1;locus_tag=C9F04_RS26905;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	146	1261	.	+	.	ID=gene-C9F04_RS04720;Name=C9F04_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04720;old_locus_tag=C9F04_04880
NZ_PYKF01000200.1	Protein Homology	CDS	146	1261	.	+	0	ID=cds-WP_146712355.1;Parent=gene-C9F04_RS04720;Dbxref=Genbank:WP_146712355.1;Name=WP_146712355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9F04_RS04720;product=baseplate J/gp47 family protein;protein_id=WP_146712355.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	1254	1886	.	+	.	ID=gene-C9F04_RS04725;Name=C9F04_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04725;old_locus_tag=C9F04_04885
NZ_PYKF01000200.1	Protein Homology	CDS	1254	1886	.	+	0	ID=cds-WP_000359503.1;Parent=gene-C9F04_RS04725;Dbxref=Genbank:WP_000359503.1;Name=WP_000359503.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9F04_RS04725;product=phage tail protein I;protein_id=WP_000359503.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	1889	3415	.	+	.	ID=gene-C9F04_RS04730;Name=C9F04_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04730;old_locus_tag=C9F04_04890
NZ_PYKF01000200.1	Protein Homology	CDS	1889	3415	.	+	0	ID=cds-WP_146712356.1;Parent=gene-C9F04_RS04730;Dbxref=Genbank:WP_146712356.1;Name=WP_146712356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=C9F04_RS04730;product=phage tail protein;protein_id=WP_146712356.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	3419	4030	.	+	.	ID=gene-C9F04_RS04735;Name=C9F04_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04735;old_locus_tag=C9F04_04895
NZ_PYKF01000200.1	Protein Homology	CDS	3419	4030	.	+	0	ID=cds-WP_261770746.1;Parent=gene-C9F04_RS04735;Dbxref=Genbank:WP_261770746.1;Name=WP_261770746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151757.1;locus_tag=C9F04_RS04735;product=DUF4376 domain-containing protein;protein_id=WP_261770746.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	4027	4482	.	+	.	ID=gene-C9F04_RS04740;Name=C9F04_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04740;old_locus_tag=C9F04_04900
NZ_PYKF01000200.1	Protein Homology	CDS	4027	4482	.	+	0	ID=cds-WP_135369174.1;Parent=gene-C9F04_RS04740;Dbxref=Genbank:WP_135369174.1;Name=WP_135369174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9F04_RS04740;product=hypothetical protein;protein_id=WP_135369174.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	pseudogene	4735	5025	.	+	.	ID=gene-C9F04_RS04745;Name=C9F04_RS04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS04745;old_locus_tag=C9F04_04905;pseudo=true
NZ_PYKF01000200.1	Protein Homology	CDS	4735	5025	.	+	0	ID=cds-C9F04_RS04745;Parent=gene-C9F04_RS04745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9F04_RS04745;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	5222	5950	.	+	.	ID=gene-C9F04_RS04750;Name=C9F04_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04750;old_locus_tag=C9F04_04910
NZ_PYKF01000200.1	Protein Homology	CDS	5222	5950	.	+	0	ID=cds-WP_000587738.1;Parent=gene-C9F04_RS04750;Dbxref=Genbank:WP_000587738.1;Name=WP_000587738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9F04_RS04750;product=hypothetical protein;protein_id=WP_000587738.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	6212	7153	.	+	.	ID=gene-C9F04_RS04755;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9F04_RS04755;old_locus_tag=C9F04_04915
NZ_PYKF01000200.1	Protein Homology	CDS	6212	7153	.	+	0	ID=cds-WP_000881652.1;Parent=gene-C9F04_RS04755;Dbxref=Genbank:WP_000881652.1;Name=WP_000881652.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9F04_RS04755;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881652.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	7251	7523	.	+	.	ID=gene-C9F04_RS04760;Name=C9F04_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04760;old_locus_tag=C9F04_04920
NZ_PYKF01000200.1	Protein Homology	CDS	7251	7523	.	+	0	ID=cds-WP_146712357.1;Parent=gene-C9F04_RS04760;Dbxref=Genbank:WP_146712357.1;Name=WP_146712357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9F04_RS04760;product=DUF3811 domain-containing protein;protein_id=WP_146712357.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	7520	8389	.	-	.	ID=gene-C9F04_RS04765;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9F04_RS04765;old_locus_tag=C9F04_04925
NZ_PYKF01000200.1	Protein Homology	CDS	7520	8389	.	-	0	ID=cds-WP_146712358.1;Parent=gene-C9F04_RS04765;Dbxref=Genbank:WP_146712358.1;Name=WP_146712358.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9F04_RS04765;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_146712358.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	8436	8975	.	-	.	ID=gene-C9F04_RS04770;Name=C9F04_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04770;old_locus_tag=C9F04_04930
NZ_PYKF01000200.1	Protein Homology	CDS	8436	8975	.	-	0	ID=cds-WP_001096724.1;Parent=gene-C9F04_RS04770;Dbxref=Genbank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9F04_RS04770;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	9010	9111	.	-	.	ID=gene-C9F04_RS04775;Name=C9F04_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04775;old_locus_tag=C9F04_04935
NZ_PYKF01000200.1	Protein Homology	CDS	9010	9111	.	-	0	ID=cds-WP_031606091.1;Parent=gene-C9F04_RS04775;Dbxref=Genbank:WP_031606091.1;Name=WP_031606091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9F04_RS04775;product=hypothetical protein;protein_id=WP_031606091.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	9183	9872	.	+	.	ID=gene-C9F04_RS04780;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9F04_RS04780;old_locus_tag=C9F04_04940
NZ_PYKF01000200.1	Protein Homology	CDS	9183	9872	.	+	0	ID=cds-WP_146712359.1;Parent=gene-C9F04_RS04780;Dbxref=Genbank:WP_146712359.1;Name=WP_146712359.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9F04_RS04780;product=dipeptidase PepE;protein_id=WP_146712359.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	gene	9947	11578	.	-	.	ID=gene-C9F04_RS04785;Name=C9F04_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS04785;old_locus_tag=C9F04_04945
NZ_PYKF01000200.1	Protein Homology	CDS	9947	11578	.	-	0	ID=cds-WP_000956811.1;Parent=gene-C9F04_RS04785;Dbxref=Genbank:WP_000956811.1;Name=WP_000956811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9F04_RS04785;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11
NZ_PYKF01000200.1	RefSeq	pseudogene	11845	13041	.	-	.	ID=gene-C9F04_RS04790;Name=metH;end_range=13041,.;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=C9F04_RS04790;old_locus_tag=C9F04_04950;partial=true;pseudo=true
NZ_PYKF01000200.1	Protein Homology	CDS	11845	13041	.	-	0	ID=cds-C9F04_RS04790;Parent=gene-C9F04_RS04790;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13041,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9F04_RS04790;partial=true;product=methionine synthase;pseudo=true;transl_table=11
##sequence-region NZ_PYKF01000161.1 1 12979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000161.1	RefSeq	region	1	12979	.	+	.	ID=NZ_PYKF01000161.1:1..12979;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000161.1	RefSeq	pseudogene	37	189	.	-	.	ID=gene-C9F04_RS03375;Name=C9F04_RS03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03375;old_locus_tag=C9F04_03485;partial=true;pseudo=true;start_range=.,37
NZ_PYKF01000161.1	Protein Homology	CDS	37	189	.	-	0	ID=cds-C9F04_RS03375;Parent=gene-C9F04_RS03375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F04_RS03375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,37;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	554	796	.	+	.	ID=gene-C9F04_RS03380;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9F04_RS03380;old_locus_tag=C9F04_03490
NZ_PYKF01000161.1	Protein Homology	CDS	554	796	.	+	0	ID=cds-WP_000977510.1;Parent=gene-C9F04_RS03380;Dbxref=Genbank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9F04_RS03380;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	899	2290	.	-	.	ID=gene-C9F04_RS03385;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9F04_RS03385;old_locus_tag=C9F04_03495
NZ_PYKF01000161.1	Protein Homology	CDS	899	2290	.	-	0	ID=cds-WP_146712293.1;Parent=gene-C9F04_RS03385;Dbxref=Genbank:WP_146712293.1;Name=WP_146712293.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9F04_RS03385;product=cystine/sulfocysteine:cation symporter;protein_id=WP_146712293.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	2427	3026	.	-	.	ID=gene-C9F04_RS03390;Name=C9F04_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03390;old_locus_tag=C9F04_03500
NZ_PYKF01000161.1	Protein Homology	CDS	2427	3026	.	-	0	ID=cds-WP_000505804.1;Parent=gene-C9F04_RS03390;Dbxref=Genbank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9F04_RS03390;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	3164	3832	.	-	.	ID=gene-C9F04_RS03395;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9F04_RS03395;old_locus_tag=C9F04_03505
NZ_PYKF01000161.1	Protein Homology	CDS	3164	3832	.	-	0	ID=cds-WP_000106848.1;Parent=gene-C9F04_RS03395;Dbxref=Genbank:WP_000106848.1;Name=WP_000106848.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9F04_RS03395;product=hexitol phosphatase HxpB;protein_id=WP_000106848.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	3981	4517	.	+	.	ID=gene-C9F04_RS03400;Name=C9F04_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03400;old_locus_tag=C9F04_03510
NZ_PYKF01000161.1	Protein Homology	CDS	3981	4517	.	+	0	ID=cds-WP_000222158.1;Parent=gene-C9F04_RS03400;Dbxref=Genbank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9F04_RS03400;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	4560	5420	.	-	.	ID=gene-C9F04_RS03405;Name=C9F04_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03405;old_locus_tag=C9F04_03515
NZ_PYKF01000161.1	Protein Homology	CDS	4560	5420	.	-	0	ID=cds-WP_000267686.1;Parent=gene-C9F04_RS03405;Dbxref=Genbank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9F04_RS03405;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	5527	5817	.	-	.	ID=gene-C9F04_RS03410;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9F04_RS03410;old_locus_tag=C9F04_03520
NZ_PYKF01000161.1	Protein Homology	CDS	5527	5817	.	-	0	ID=cds-WP_000146133.1;Parent=gene-C9F04_RS03410;Dbxref=Genbank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9F04_RS03410;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	5914	6846	.	-	.	ID=gene-C9F04_RS03415;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9F04_RS03415;old_locus_tag=C9F04_03525
NZ_PYKF01000161.1	Protein Homology	CDS	5914	6846	.	-	0	ID=cds-WP_146712294.1;Parent=gene-C9F04_RS03415;Dbxref=Genbank:WP_146712294.1;Name=WP_146712294.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9F04_RS03415;product=6-phosphofructokinase II;protein_id=WP_146712294.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	7135	7893	.	+	.	ID=gene-C9F04_RS03420;Name=C9F04_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03420;old_locus_tag=C9F04_03530
NZ_PYKF01000161.1	Protein Homology	CDS	7135	7893	.	+	0	ID=cds-WP_000770981.1;Parent=gene-C9F04_RS03420;Dbxref=Genbank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9F04_RS03420;product=YdiY family protein;protein_id=WP_000770981.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	7942	8901	.	-	.	ID=gene-C9F04_RS03425;Name=C9F04_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03425;old_locus_tag=C9F04_03535
NZ_PYKF01000161.1	Protein Homology	CDS	7942	8901	.	-	0	ID=cds-WP_001046434.1;Parent=gene-C9F04_RS03425;Dbxref=Genbank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9F04_RS03425;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	9044	9358	.	+	.	ID=gene-C9F04_RS03430;Name=C9F04_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03430;old_locus_tag=C9F04_03540
NZ_PYKF01000161.1	Protein Homology	CDS	9044	9358	.	+	0	ID=cds-WP_000916613.1;Parent=gene-C9F04_RS03430;Dbxref=Genbank:WP_000916613.1;Name=WP_000916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9F04_RS03430;product=hypothetical protein;protein_id=WP_000916613.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	9355	10209	.	+	.	ID=gene-C9F04_RS03435;Name=C9F04_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03435;old_locus_tag=C9F04_03545
NZ_PYKF01000161.1	Protein Homology	CDS	9355	10209	.	+	0	ID=cds-WP_001044093.1;Parent=gene-C9F04_RS03435;Dbxref=Genbank:WP_001044093.1;Name=WP_001044093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F04_RS03435;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11
NZ_PYKF01000161.1	RefSeq	pseudogene	10382	10587	.	+	.	ID=gene-C9F04_RS03440;Name=C9F04_RS03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS03440;old_locus_tag=C9F04_03550;pseudo=true
NZ_PYKF01000161.1	Protein Homology	CDS	10382	10587	.	+	0	ID=cds-C9F04_RS03440;Parent=gene-C9F04_RS03440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=C9F04_RS03440;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000161.1	RefSeq	gene	10894	12117	.	-	.	ID=gene-C9F04_RS03445;Name=C9F04_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS03445;old_locus_tag=C9F04_03555
NZ_PYKF01000161.1	Protein Homology	CDS	10894	12117	.	-	0	ID=cds-WP_053445631.1;Parent=gene-C9F04_RS03445;Dbxref=Genbank:WP_053445631.1;Name=WP_053445631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=C9F04_RS03445;product=O-antigen polymerase;protein_id=WP_053445631.1;transl_table=11
##sequence-region NZ_PYKF01000564.1 1 12900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000564.1	RefSeq	region	1	12900	.	+	.	ID=NZ_PYKF01000564.1:1..12900;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000564.1	RefSeq	gene	1	655	.	-	.	ID=gene-C9F04_RS16795;Name=C9F04_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16795;old_locus_tag=C9F04_17330;partial=true;start_range=.,1
NZ_PYKF01000564.1	Protein Homology	CDS	1	655	.	-	0	ID=cds-WP_261771318.1;Parent=gene-C9F04_RS16795;Dbxref=Genbank:WP_261771318.1;Name=WP_261771318.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9F04_RS16795;partial=true;product=SLC13 family permease;protein_id=WP_261771318.1;start_range=.,1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	881	1804	.	+	.	ID=gene-C9F04_RS16800;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9F04_RS16800;old_locus_tag=C9F04_17335
NZ_PYKF01000564.1	Protein Homology	CDS	881	1804	.	+	0	ID=cds-WP_061375735.1;Parent=gene-C9F04_RS16800;Dbxref=Genbank:WP_061375735.1;Name=WP_061375735.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9F04_RS16800;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_061375735.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	1868	2953	.	+	.	ID=gene-C9F04_RS16805;Name=C9F04_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16805;old_locus_tag=C9F04_17340
NZ_PYKF01000564.1	Protein Homology	CDS	1868	2953	.	+	0	ID=cds-WP_000238928.1;Parent=gene-C9F04_RS16805;Dbxref=Genbank:WP_000238928.1;Name=WP_000238928.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9F04_RS16805;product=cellulase family glycosylhydrolase;protein_id=WP_000238928.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	2880	4064	.	-	.	ID=gene-C9F04_RS16810;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9F04_RS16810;old_locus_tag=C9F04_17345
NZ_PYKF01000564.1	Protein Homology	CDS	2880	4064	.	-	0	ID=cds-WP_000828744.1;Parent=gene-C9F04_RS16810;Dbxref=Genbank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9F04_RS16810;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	4267	5127	.	-	.	ID=gene-C9F04_RS16815;Name=C9F04_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16815;old_locus_tag=C9F04_17350
NZ_PYKF01000564.1	Protein Homology	CDS	4267	5127	.	-	0	ID=cds-WP_001531658.1;Parent=gene-C9F04_RS16815;Dbxref=Genbank:WP_001531658.1;Name=WP_001531658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9F04_RS16815;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	5220	5309	.	-	.	ID=gene-C9F04_RS16820;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9F04_RS16820;old_locus_tag=C9F04_17355
NZ_PYKF01000564.1	Protein Homology	CDS	5220	5309	.	-	0	ID=cds-WP_000117642.1;Parent=gene-C9F04_RS16820;Dbxref=Genbank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9F04_RS16820;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	pseudogene	5306	5420	.	-	.	ID=gene-C9F04_RS16825;Name=C9F04_RS16825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS16825;old_locus_tag=C9F04_17360;pseudo=true
NZ_PYKF01000564.1	Protein Homology	CDS	5306	5420	.	-	0	ID=cds-C9F04_RS16825;Parent=gene-C9F04_RS16825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9F04_RS16825;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	5943	6041	.	+	.	ID=gene-C9F04_RS16830;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9F04_RS16830;old_locus_tag=C9F04_17370
NZ_PYKF01000564.1	Protein Homology	CDS	5943	6041	.	+	0	ID=cds-WP_001541152.1;Parent=gene-C9F04_RS16830;Dbxref=Genbank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9F04_RS16830;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	6148	7836	.	+	.	ID=gene-C9F04_RS16835;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9F04_RS16835;old_locus_tag=C9F04_17375
NZ_PYKF01000564.1	Protein Homology	CDS	6148	7836	.	+	0	ID=cds-WP_146712911.1;Parent=gene-C9F04_RS16835;Dbxref=Genbank:WP_146712911.1;Name=WP_146712911.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9F04_RS16835;product=acetolactate synthase large subunit;protein_id=WP_146712911.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	7840	8130	.	+	.	ID=gene-C9F04_RS16840;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9F04_RS16840;old_locus_tag=C9F04_17380
NZ_PYKF01000564.1	Protein Homology	CDS	7840	8130	.	+	0	ID=cds-WP_001171826.1;Parent=gene-C9F04_RS16840;Dbxref=Genbank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9F04_RS16840;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	8132	8917	.	-	.	ID=gene-C9F04_RS16845;Name=C9F04_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16845;old_locus_tag=C9F04_17385
NZ_PYKF01000564.1	Protein Homology	CDS	8132	8917	.	-	0	ID=cds-WP_000448638.1;Parent=gene-C9F04_RS16845;Dbxref=Genbank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9F04_RS16845;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	9242	10162	.	+	.	ID=gene-C9F04_RS16850;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F04_RS16850;old_locus_tag=C9F04_17390
NZ_PYKF01000564.1	Protein Homology	CDS	9242	10162	.	+	0	ID=cds-WP_000350272.1;Parent=gene-C9F04_RS16850;Dbxref=Genbank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9F04_RS16850;product=ribokinase;protein_id=WP_000350272.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	10193	11509	.	+	.	ID=gene-C9F04_RS16855;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F04_RS16855;old_locus_tag=C9F04_17395
NZ_PYKF01000564.1	Protein Homology	CDS	10193	11509	.	+	0	ID=cds-WP_000998358.1;Parent=gene-C9F04_RS16855;Dbxref=Genbank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9F04_RS16855;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	11521	12534	.	+	.	ID=gene-C9F04_RS16860;Name=C9F04_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16860;old_locus_tag=C9F04_17400
NZ_PYKF01000564.1	Protein Homology	CDS	11521	12534	.	+	0	ID=cds-WP_146712912.1;Parent=gene-C9F04_RS16860;Dbxref=Genbank:WP_146712912.1;Name=WP_146712912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9F04_RS16860;product=aldose 1-epimerase family protein;protein_id=WP_146712912.1;transl_table=11
NZ_PYKF01000564.1	RefSeq	gene	12609	12900	.	+	.	ID=gene-C9F04_RS16865;Name=C9F04_RS16865;end_range=12900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS16865;old_locus_tag=C9F04_17405;partial=true
NZ_PYKF01000564.1	Protein Homology	CDS	12609	12900	.	+	0	ID=cds-WP_146712913.1;Parent=gene-C9F04_RS16865;Dbxref=Genbank:WP_146712913.1;Name=WP_146712913.1;Ontology_term=GO:0000160;end_range=12900,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=C9F04_RS16865;partial=true;product=response regulator;protein_id=WP_146712913.1;transl_table=11
##sequence-region NZ_PYKF01000584.1 1 12859
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000584.1	RefSeq	region	1	12859	.	+	.	ID=NZ_PYKF01000584.1:1..12859;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000584.1	RefSeq	gene	431	997	.	-	.	ID=gene-C9F04_RS17370;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9F04_RS17370;old_locus_tag=C9F04_17930
NZ_PYKF01000584.1	Protein Homology	CDS	431	997	.	-	0	ID=cds-WP_135369505.1;Parent=gene-C9F04_RS17370;Dbxref=Genbank:WP_135369505.1;Name=WP_135369505.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9F04_RS17370;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_135369505.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	1187	2218	.	+	.	ID=gene-C9F04_RS17375;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9F04_RS17375;old_locus_tag=C9F04_17935
NZ_PYKF01000584.1	Protein Homology	CDS	1187	2218	.	+	0	ID=cds-WP_000594018.1;Parent=gene-C9F04_RS17375;Dbxref=Genbank:WP_000594018.1;Name=WP_000594018.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9F04_RS17375;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594018.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	2211	2864	.	+	.	ID=gene-C9F04_RS17380;Name=C9F04_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17380;old_locus_tag=C9F04_17940
NZ_PYKF01000584.1	Protein Homology	CDS	2211	2864	.	+	0	ID=cds-WP_146712941.1;Parent=gene-C9F04_RS17380;Dbxref=Genbank:WP_146712941.1;Name=WP_146712941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9F04_RS17380;product=methionine ABC transporter permease MetI;protein_id=WP_146712941.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	2903	3718	.	+	.	ID=gene-C9F04_RS17385;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9F04_RS17385;old_locus_tag=C9F04_17945
NZ_PYKF01000584.1	Protein Homology	CDS	2903	3718	.	+	0	ID=cds-WP_000874215.1;Parent=gene-C9F04_RS17385;Dbxref=Genbank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9F04_RS17385;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	3837	4241	.	+	.	ID=gene-C9F04_RS17390;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9F04_RS17390;old_locus_tag=C9F04_17950
NZ_PYKF01000584.1	Protein Homology	CDS	3837	4241	.	+	0	ID=cds-WP_146712942.1;Parent=gene-C9F04_RS17390;Dbxref=Genbank:WP_146712942.1;Name=WP_146712942.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9F04_RS17390;product=Rcs stress response system protein RcsF;protein_id=WP_146712942.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	4238	4945	.	+	.	ID=gene-C9F04_RS17395;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9F04_RS17395;old_locus_tag=C9F04_17955
NZ_PYKF01000584.1	Protein Homology	CDS	4238	4945	.	+	0	ID=cds-WP_000093988.1;Parent=gene-C9F04_RS17395;Dbxref=Genbank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9F04_RS17395;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	5056	6774	.	+	.	ID=gene-C9F04_RS17400;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9F04_RS17400;old_locus_tag=C9F04_17960
NZ_PYKF01000584.1	Protein Homology	CDS	5056	6774	.	+	0	ID=cds-WP_001260687.1;Parent=gene-C9F04_RS17400;Dbxref=Genbank:WP_001260687.1;Name=WP_001260687.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9F04_RS17400;product=proline--tRNA ligase;protein_id=WP_001260687.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	6848	7549	.	-	.	ID=gene-C9F04_RS17405;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9F04_RS17405;old_locus_tag=C9F04_17965
NZ_PYKF01000584.1	Protein Homology	CDS	6848	7549	.	-	0	ID=cds-WP_000252576.1;Parent=gene-C9F04_RS17405;Dbxref=Genbank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9F04_RS17405;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	7581	8003	.	-	.	ID=gene-C9F04_RS17410;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9F04_RS17410;old_locus_tag=C9F04_17970
NZ_PYKF01000584.1	Protein Homology	CDS	7581	8003	.	-	0	ID=cds-WP_000560527.1;Parent=gene-C9F04_RS17410;Dbxref=Genbank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9F04_RS17410;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	8000	8545	.	-	.	ID=gene-C9F04_RS17415;Name=C9F04_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17415;old_locus_tag=C9F04_17975
NZ_PYKF01000584.1	Protein Homology	CDS	8000	8545	.	-	0	ID=cds-WP_146712943.1;Parent=gene-C9F04_RS17415;Dbxref=Genbank:WP_146712943.1;Name=WP_146712943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9F04_RS17415;product=YaeQ family protein;protein_id=WP_146712943.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	8743	8943	.	+	.	ID=gene-C9F04_RS17420;Name=C9F04_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17420;old_locus_tag=C9F04_17980
NZ_PYKF01000584.1	Protein Homology	CDS	8743	8943	.	+	0	ID=cds-WP_001518678.1;Parent=gene-C9F04_RS17420;Dbxref=Genbank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9F04_RS17420;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	8930	9190	.	+	.	ID=gene-C9F04_RS17425;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9F04_RS17425;old_locus_tag=C9F04_17985
NZ_PYKF01000584.1	Protein Homology	CDS	8930	9190	.	+	0	ID=cds-WP_000062330.1;Parent=gene-C9F04_RS17425;Dbxref=Genbank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9F04_RS17425;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	9274	10566	.	-	.	ID=gene-C9F04_RS17430;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9F04_RS17430;old_locus_tag=C9F04_17990
NZ_PYKF01000584.1	Protein Homology	CDS	9274	10566	.	-	0	ID=cds-WP_135369504.1;Parent=gene-C9F04_RS17430;Dbxref=Genbank:WP_135369504.1;Name=WP_135369504.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9F04_RS17430;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_135369504.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	10629	11018	.	-	.	ID=gene-C9F04_RS17435;Name=C9F04_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17435;old_locus_tag=C9F04_17995
NZ_PYKF01000584.1	Protein Homology	CDS	10629	11018	.	-	0	ID=cds-WP_146712944.1;Parent=gene-C9F04_RS17435;Dbxref=Genbank:WP_146712944.1;Name=WP_146712944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9F04_RS17435;product=VOC family protein;protein_id=WP_146712944.1;transl_table=11
NZ_PYKF01000584.1	RefSeq	gene	11074	12859	.	-	.	ID=gene-C9F04_RS17440;Name=C9F04_RS17440;end_range=12859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS17440;old_locus_tag=C9F04_18000;partial=true
NZ_PYKF01000584.1	Protein Homology	CDS	11074	12859	.	-	1	ID=cds-WP_146712945.1;Parent=gene-C9F04_RS17440;Dbxref=Genbank:WP_146712945.1;Name=WP_146712945.1;end_range=12859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295383.1;locus_tag=C9F04_RS17440;partial=true;product=lysine decarboxylase LdcC;protein_id=WP_146712945.1;transl_table=11
##sequence-region NZ_PYKF01000723.1 1 12857
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000723.1	RefSeq	region	1	12857	.	+	.	ID=NZ_PYKF01000723.1:1..12857;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000723.1	RefSeq	gene	1	531	.	-	.	ID=gene-C9F04_RS22395;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9F04_RS22395;partial=true;start_range=.,1
NZ_PYKF01000723.1	Protein Homology	CDS	1	531	.	-	0	ID=cds-WP_261771467.1;Parent=gene-C9F04_RS22395;Dbxref=Genbank:WP_261771467.1;Name=WP_261771467.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983111.1;locus_tag=C9F04_RS22395;partial=true;product=cell division protein ZipA;protein_id=WP_261771467.1;start_range=.,1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	763	1524	.	+	.	ID=gene-C9F04_RS22400;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9F04_RS22400;old_locus_tag=C9F04_23140
NZ_PYKF01000723.1	Protein Homology	CDS	763	1524	.	+	0	ID=cds-WP_000255008.1;Parent=gene-C9F04_RS22400;Dbxref=Genbank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005887;gbkey=CDS;gene=cysZ;go_component=integral component of plasma membrane|0005887||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9F04_RS22400;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	1688	2659	.	+	.	ID=gene-C9F04_RS22405;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9F04_RS22405;old_locus_tag=C9F04_23145
NZ_PYKF01000723.1	Protein Homology	CDS	1688	2659	.	+	0	ID=cds-WP_146713196.1;Parent=gene-C9F04_RS22405;Dbxref=Genbank:WP_146713196.1;Name=WP_146713196.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F04_RS22405;product=cysteine synthase A;protein_id=WP_146713196.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	3043	3300	.	+	.	ID=gene-C9F04_RS22410;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9F04_RS22410;old_locus_tag=C9F04_23150
NZ_PYKF01000723.1	Protein Homology	CDS	3043	3300	.	+	0	ID=cds-WP_000487600.1;Parent=gene-C9F04_RS22410;Dbxref=Genbank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9F04_RS22410;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	3349	5076	.	+	.	ID=gene-C9F04_RS22415;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9F04_RS22415;old_locus_tag=C9F04_23155
NZ_PYKF01000723.1	Protein Homology	CDS	3349	5076	.	+	0	ID=cds-WP_146713197.1;Parent=gene-C9F04_RS22415;Dbxref=Genbank:WP_146713197.1;Name=WP_146713197.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=C9F04_RS22415;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_146713197.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	5117	5626	.	+	.	ID=gene-C9F04_RS22420;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9F04_RS22420;old_locus_tag=C9F04_23160
NZ_PYKF01000723.1	Protein Homology	CDS	5117	5626	.	+	0	ID=cds-WP_000522253.1;Parent=gene-C9F04_RS22420;Dbxref=Genbank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9F04_RS22420;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	pseudogene	5782	6015	.	-	.	ID=gene-C9F04_RS22425;Name=C9F04_RS22425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS22425;old_locus_tag=C9F04_23165;partial=true;pseudo=true;start_range=.,5782
NZ_PYKF01000723.1	Protein Homology	CDS	5782	6015	.	-	0	ID=cds-C9F04_RS22425;Parent=gene-C9F04_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9F04_RS22425;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,5782;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	6012	6878	.	-	.	ID=gene-C9F04_RS22430;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9F04_RS22430;old_locus_tag=C9F04_23170
NZ_PYKF01000723.1	Protein Homology	CDS	6012	6878	.	-	0	ID=cds-WP_000529613.1;Parent=gene-C9F04_RS22430;Dbxref=Genbank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9F04_RS22430;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	6961	8253	.	+	.	ID=gene-C9F04_RS22435;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9F04_RS22435;old_locus_tag=C9F04_23175
NZ_PYKF01000723.1	Protein Homology	CDS	6961	8253	.	+	0	ID=cds-WP_146713198.1;Parent=gene-C9F04_RS22435;Dbxref=Genbank:WP_146713198.1;Name=WP_146713198.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9F04_RS22435;product=transcriptional regulator PtsJ;protein_id=WP_146713198.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	8268	8987	.	+	.	ID=gene-C9F04_RS22440;Name=C9F04_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22440;old_locus_tag=C9F04_23180
NZ_PYKF01000723.1	Protein Homology	CDS	8268	8987	.	+	0	ID=cds-WP_001263761.1;Parent=gene-C9F04_RS22440;Dbxref=Genbank:WP_001263761.1;Name=WP_001263761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9F04_RS22440;product=GMP synthase;protein_id=WP_001263761.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	9046	9426	.	+	.	ID=gene-C9F04_RS22445;Name=C9F04_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22445;old_locus_tag=C9F04_23185
NZ_PYKF01000723.1	Protein Homology	CDS	9046	9426	.	+	0	ID=cds-WP_000710729.1;Parent=gene-C9F04_RS22445;Dbxref=Genbank:WP_000710729.1;Name=WP_000710729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9F04_RS22445;product=YfeK family protein;protein_id=WP_000710729.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	9439	9978	.	+	.	ID=gene-C9F04_RS22450;Name=C9F04_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS22450;old_locus_tag=C9F04_23190
NZ_PYKF01000723.1	Protein Homology	CDS	9439	9978	.	+	0	ID=cds-WP_001119689.1;Parent=gene-C9F04_RS22450;Dbxref=Genbank:WP_001119689.1;Name=WP_001119689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9F04_RS22450;product=transglycosylase domain-containing protein;protein_id=WP_001119689.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	10109	11020	.	-	.	ID=gene-C9F04_RS22455;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9F04_RS22455;old_locus_tag=C9F04_23200
NZ_PYKF01000723.1	Protein Homology	CDS	10109	11020	.	-	0	ID=cds-WP_135369683.1;Parent=gene-C9F04_RS22455;Dbxref=Genbank:WP_135369683.1;Name=WP_135369683.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9F04_RS22455;product=cysteine synthase CysM;protein_id=WP_135369683.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	11088	12185	.	-	.	ID=gene-C9F04_RS22460;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9F04_RS22460;old_locus_tag=C9F04_23205
NZ_PYKF01000723.1	Protein Homology	CDS	11088	12185	.	-	0	ID=cds-WP_146713199.1;Parent=gene-C9F04_RS22460;Dbxref=Genbank:WP_146713199.1;Name=WP_146713199.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9F04_RS22460;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_146713199.1;transl_table=11
NZ_PYKF01000723.1	RefSeq	gene	12175	12857	.	-	.	ID=gene-C9F04_RS22465;Name=cysW;end_range=12857,.;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9F04_RS22465;old_locus_tag=C9F04_23210;partial=true
NZ_PYKF01000723.1	Protein Homology	CDS	12175	12857	.	-	2	ID=cds-WP_146713200.1;Parent=gene-C9F04_RS22465;Dbxref=Genbank:WP_146713200.1;Name=WP_146713200.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;end_range=12857,.;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9F04_RS22465;partial=true;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_146713200.1;transl_table=11
##sequence-region NZ_PYKF01000695.1 1 28041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKF01000695.1	RefSeq	region	1	28041	.	+	.	ID=NZ_PYKF01000695.1:1..28041;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=32eva;sub-species=enterica
NZ_PYKF01000695.1	RefSeq	pseudogene	1	177	.	-	.	ID=gene-C9F04_RS21420;Name=C9F04_RS21420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21420;old_locus_tag=C9F04_22120;partial=true;pseudo=true;start_range=.,1
NZ_PYKF01000695.1	Protein Homology	CDS	1	177	.	-	0	ID=cds-C9F04_RS21420;Parent=gene-C9F04_RS21420;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9F04_RS21420;partial=true;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	177	512	.	-	.	ID=gene-C9F04_RS21425;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9F04_RS21425;old_locus_tag=C9F04_22125
NZ_PYKF01000695.1	Protein Homology	CDS	177	512	.	-	0	ID=cds-WP_000580688.1;Parent=gene-C9F04_RS21425;Dbxref=Genbank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9F04_RS21425;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	509	2155	.	-	.	ID=gene-C9F04_RS21430;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9F04_RS21430;old_locus_tag=C9F04_22130
NZ_PYKF01000695.1	Protein Homology	CDS	509	2155	.	-	0	ID=cds-WP_135369263.1;Parent=gene-C9F04_RS21430;Dbxref=Genbank:WP_135369263.1;Name=WP_135369263.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9F04_RS21430;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_135369263.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	2152	3051	.	-	.	ID=gene-C9F04_RS21435;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9F04_RS21435;old_locus_tag=C9F04_22135
NZ_PYKF01000695.1	Protein Homology	CDS	2152	3051	.	-	0	ID=cds-WP_000169760.1;Parent=gene-C9F04_RS21435;Dbxref=Genbank:WP_000169760.1;Name=WP_000169760.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9F04_RS21435;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169760.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	3048	5030	.	-	.	ID=gene-C9F04_RS21440;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9F04_RS21440;old_locus_tag=C9F04_22140
NZ_PYKF01000695.1	Protein Homology	CDS	3048	5030	.	-	0	ID=cds-WP_064047212.1;Parent=gene-C9F04_RS21440;Dbxref=Genbank:WP_064047212.1;Name=WP_064047212.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9F04_RS21440;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_064047212.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	5027	6010	.	-	.	ID=gene-C9F04_RS21445;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9F04_RS21445;old_locus_tag=C9F04_22145
NZ_PYKF01000695.1	Protein Homology	CDS	5027	6010	.	-	0	ID=cds-WP_146713140.1;Parent=gene-C9F04_RS21445;Dbxref=Genbank:WP_146713140.1;Name=WP_146713140.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9F04_RS21445;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_146713140.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	6013	7152	.	-	.	ID=gene-C9F04_RS21450;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9F04_RS21450;old_locus_tag=C9F04_22150
NZ_PYKF01000695.1	Protein Homology	CDS	6013	7152	.	-	0	ID=cds-WP_135369264.1;Parent=gene-C9F04_RS21450;Dbxref=Genbank:WP_135369264.1;Name=WP_135369264.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9F04_RS21450;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_135369264.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	7451	8056	.	+	.	ID=gene-C9F04_RS21455;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9F04_RS21455;old_locus_tag=C9F04_22155
NZ_PYKF01000695.1	Protein Homology	CDS	7451	8056	.	+	0	ID=cds-WP_000879258.1;Parent=gene-C9F04_RS21455;Dbxref=Genbank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9F04_RS21455;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	8101	8526	.	-	.	ID=gene-C9F04_RS21460;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9F04_RS21460;old_locus_tag=C9F04_22160
NZ_PYKF01000695.1	Protein Homology	CDS	8101	8526	.	-	0	ID=cds-WP_001249900.1;Parent=gene-C9F04_RS21460;Dbxref=Genbank:WP_001249900.1;Name=WP_001249900.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9F04_RS21460;product=nucleoside triphosphatase NudI;protein_id=WP_001249900.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	8805	9347	.	+	.	ID=gene-C9F04_RS21465;Name=C9F04_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21465;old_locus_tag=C9F04_22165
NZ_PYKF01000695.1	Protein Homology	CDS	8805	9347	.	+	0	ID=cds-WP_001670658.1;Parent=gene-C9F04_RS21465;Dbxref=Genbank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9F04_RS21465;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	pseudogene	9462	10658	.	+	.	ID=gene-C9F04_RS21470;Name=C9F04_RS21470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21470;old_locus_tag=C9F04_22170;pseudo=true
NZ_PYKF01000695.1	Protein Homology	CDS	9462	10658	.	+	0	ID=cds-C9F04_RS21470;Parent=gene-C9F04_RS21470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9F04_RS21470;product=nicotinamide mononucleotide deamidase-related protein YfaY;pseudo=true;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	10908	11690	.	+	.	ID=gene-C9F04_RS21475;Name=C9F04_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21475;old_locus_tag=C9F04_22175
NZ_PYKF01000695.1	Protein Homology	CDS	10908	11690	.	+	0	ID=cds-WP_114050950.1;Parent=gene-C9F04_RS21475;Dbxref=Genbank:WP_114050950.1;Name=WP_114050950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9F04_RS21475;product=IclR family transcriptional regulator;protein_id=WP_114050950.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	pseudogene	11704	12909	.	+	.	ID=gene-C9F04_RS21480;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=pseudogene;locus_tag=C9F04_RS21480;old_locus_tag=C9F04_22180;pseudo=true
NZ_PYKF01000695.1	Protein Homology	CDS	11704	12909	.	+	0	ID=cds-C9F04_RS21480;Parent=gene-C9F04_RS21480;Note=internal stop;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9F04_RS21480;product=L-rhamnonate dehydratase;pseudo=true;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	12965	14254	.	+	.	ID=gene-C9F04_RS21485;Name=C9F04_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21485;old_locus_tag=C9F04_22185
NZ_PYKF01000695.1	Protein Homology	CDS	12965	14254	.	+	0	ID=cds-WP_000028931.1;Parent=gene-C9F04_RS21485;Dbxref=Genbank:WP_000028931.1;Name=WP_000028931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9F04_RS21485;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	14280	15083	.	+	.	ID=gene-C9F04_RS21490;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9F04_RS21490;old_locus_tag=C9F04_22190
NZ_PYKF01000695.1	Protein Homology	CDS	14280	15083	.	+	0	ID=cds-WP_000992941.1;Parent=gene-C9F04_RS21490;Dbxref=Genbank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9F04_RS21490;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	15089	15265	.	+	.	ID=gene-C9F04_RS21495;Name=C9F04_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21495;old_locus_tag=C9F04_22195
NZ_PYKF01000695.1	Protein Homology	CDS	15089	15265	.	+	0	ID=cds-WP_023203574.1;Parent=gene-C9F04_RS21495;Dbxref=Genbank:WP_023203574.1;Name=WP_023203574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9F04_RS21495;product=competence damage-inducible protein A;protein_id=WP_023203574.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	15499	16521	.	-	.	ID=gene-C9F04_RS21500;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9F04_RS21500;old_locus_tag=C9F04_22205
NZ_PYKF01000695.1	Protein Homology	CDS	15499	16521	.	-	0	ID=cds-WP_146713141.1;Parent=gene-C9F04_RS21500;Dbxref=Genbank:WP_146713141.1;Name=WP_146713141.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9F04_RS21500;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_146713141.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	16947	18137	.	-	.	ID=gene-C9F04_RS21505;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9F04_RS21505;old_locus_tag=C9F04_22215
NZ_PYKF01000695.1	Protein Homology	CDS	16947	18137	.	-	0	ID=cds-WP_001285724.1;Parent=gene-C9F04_RS21505;Dbxref=Genbank:WP_001285724.1;Name=WP_001285724.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9F04_RS21505;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285724.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	18134	19393	.	-	.	ID=gene-C9F04_RS21510;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9F04_RS21510;old_locus_tag=C9F04_22220
NZ_PYKF01000695.1	Protein Homology	CDS	18134	19393	.	-	0	ID=cds-WP_000667148.1;Parent=gene-C9F04_RS21510;Dbxref=Genbank:WP_000667148.1;Name=WP_000667148.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9F04_RS21510;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667148.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	19383	21011	.	-	.	ID=gene-C9F04_RS21515;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9F04_RS21515;old_locus_tag=C9F04_22225
NZ_PYKF01000695.1	Protein Homology	CDS	19383	21011	.	-	0	ID=cds-WP_146713142.1;Parent=gene-C9F04_RS21515;Dbxref=Genbank:WP_146713142.1;Name=WP_146713142.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9F04_RS21515;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_146713142.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	21284	22642	.	+	.	ID=gene-C9F04_RS21520;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9F04_RS21520;old_locus_tag=C9F04_22230
NZ_PYKF01000695.1	Protein Homology	CDS	21284	22642	.	+	0	ID=cds-WP_146713143.1;Parent=gene-C9F04_RS21520;Dbxref=Genbank:WP_146713143.1;Name=WP_146713143.1;Ontology_term=GO:0015794,GO:0015169,GO:0016021;gbkey=CDS;gene=glpT;go_component=integral component of membrane|0016021||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9F04_RS21520;product=glycerol-3-phosphate transporter;protein_id=WP_146713143.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	22647	23717	.	+	.	ID=gene-C9F04_RS21525;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9F04_RS21525;old_locus_tag=C9F04_22235
NZ_PYKF01000695.1	Protein Homology	CDS	22647	23717	.	+	0	ID=cds-WP_000858952.1;Parent=gene-C9F04_RS21525;Dbxref=Genbank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9F04_RS21525;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	23833	24711	.	-	.	ID=gene-C9F04_RS21530;Name=C9F04_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21530;old_locus_tag=C9F04_22240
NZ_PYKF01000695.1	Protein Homology	CDS	23833	24711	.	-	0	ID=cds-WP_146713144.1;Parent=gene-C9F04_RS21530;Dbxref=Genbank:WP_146713144.1;Name=WP_146713144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9F04_RS21530;product=LysR substrate-binding domain-containing protein;protein_id=WP_146713144.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	24873	26063	.	+	.	ID=gene-C9F04_RS21535;Name=C9F04_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F04_RS21535;old_locus_tag=C9F04_22245
NZ_PYKF01000695.1	Protein Homology	CDS	24873	26063	.	+	0	ID=cds-WP_146713145.1;Parent=gene-C9F04_RS21535;Dbxref=Genbank:WP_146713145.1;Name=WP_146713145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9F04_RS21535;product=MFS transporter;protein_id=WP_146713145.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	26065	26319	.	-	.	ID=gene-C9F04_RS21540;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9F04_RS21540;old_locus_tag=C9F04_22250
NZ_PYKF01000695.1	Protein Homology	CDS	26065	26319	.	-	0	ID=cds-WP_000533921.1;Parent=gene-C9F04_RS21540;Dbxref=Genbank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9F04_RS21540;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	gene	26319	27449	.	-	.	ID=gene-C9F04_RS21545;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9F04_RS21545;old_locus_tag=C9F04_22255
NZ_PYKF01000695.1	Protein Homology	CDS	26319	27449	.	-	0	ID=cds-WP_000332026.1;Parent=gene-C9F04_RS21545;Dbxref=Genbank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9F04_RS21545;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11
NZ_PYKF01000695.1	RefSeq	pseudogene	27562	28041	.	-	.	ID=gene-C9F04_RS21550;Name=C9F04_RS21550;end_range=28041,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F04_RS21550;old_locus_tag=C9F04_22260;partial=true;pseudo=true
NZ_PYKF01000695.1	Protein Homology	CDS	27562	28041	.	-	0	ID=cds-C9F04_RS21550;Parent=gene-C9F04_RS21550;Note=Catalyzes the rate-limiting step in dNTP synthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=28041,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F04_RS21550;partial=true;product=ribonucleotide-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
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